Citrus Sinensis ID: 030153

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
MATSLCYAKPLKPFSLQLPQTQNPQIPTQTTQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVFF
cccccccccccccccccccccccccccccccccccccEEEEEcccccEEEEEccccHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHcccEEEEEccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHcccEEEEccEEc
cccEEEEcccccccEccccccccccccccccccccHcEEEEEEccccEEEEEccEcHHHHHHHHHHHHHEcccEEEEcccHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEcccccccEccHHHHccccHHHHHHHHHHHHHcEEEEEccccccccccccHHHHHHHHHcccEEEEccccc
matslcyakplkpfslqlpqtqnpqiptqtTQIREAetltitgptqlsghvpisgsknssLCLLAATLLCsnscllhnvptglsdTKAMLSILRSLGakiefnernkeilvntdgvgrvepCLEEMRKIRggffvigpllarfgeavvglpggcdigerpVDLYVRGLRALGAAVEISYVFF
MATSLCYAKPLKpfslqlpqtqnpQIPTQTTQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLgakiefnernkeilvntdgvgrvePCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGaaveisyvff
MATSLCYAKPLKPFSlqlpqtqnpqiptqttqiREAETLTITGPTQLSGHVPISGSKnsslcllaatllcsnscllHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVFF
**********************************************************SSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVF*
********KPLKPFSL**********************LTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVFF
MATSLCYAKPLKPFSLQLPQTQNPQIPTQTTQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVFF
**TSLCYAKPLKPFSLQLPQTQNPQIPTQTTQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYV*F
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATSLCYAKPLKPFSLQLPQTQNPQIPTQTTQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVFF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query182 2.2.26 [Sep-21-2011]
Q3A949 419 UDP-N-acetylglucosamine 1 yes no 0.785 0.341 0.445 6e-29
Q55673 438 UDP-N-acetylglucosamine 1 N/A no 0.835 0.347 0.438 2e-28
Q898X3 417 UDP-N-acetylglucosamine 1 yes no 0.780 0.340 0.370 2e-28
Q97F79 418 UDP-N-acetylglucosamine 1 yes no 0.769 0.334 0.404 6e-28
A5EYD6 419 UDP-N-acetylglucosamine 1 yes no 0.752 0.326 0.461 4e-27
Q7NGP3 459 UDP-N-acetylglucosamine 1 yes no 0.763 0.302 0.482 4e-27
Q3AAE9 420 UDP-N-acetylglucosamine 1 no no 0.747 0.323 0.457 5e-27
A4G9J3 416 UDP-N-acetylglucosamine 1 yes no 0.785 0.343 0.431 5e-27
Q2KTT8 421 UDP-N-acetylglucosamine 1 yes no 0.785 0.339 0.452 8e-27
C0QDM7 417 UDP-N-acetylglucosamine 1 yes no 0.758 0.330 0.439 1e-26
>sp|Q3A949|MURA2_CARHZ UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=murA2 PE=3 SV=1 Back     alignment and function desciption
 Score =  127 bits (318), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 95/146 (65%), Gaps = 3/146 (2%)

Query: 37  ETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSL 96
           E   I G  +L+G V ISG+KN++L +LA  LL   +  L  VP  L+D   ML +L++L
Sbjct: 2   EKFVIEGKQRLTGRVKISGAKNAALPILAGALLTGGTVRLTEVPE-LTDIYTMLEVLKAL 60

Query: 97  GAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDI 156
           GAK+ F+E   E++++T  +   E   E++RK+R  F V+GPLLAR G A + LPGGC I
Sbjct: 61  GAKVTFSE--GEVVLHTPEITSAEAPYEQVRKMRASFLVMGPLLARTGRARISLPGGCAI 118

Query: 157 GERPVDLYVRGLRALGAAVEISYVFF 182
           G RP+DL+++G  ALGA +E+ + F 
Sbjct: 119 GARPIDLHLKGFEALGAKIEMGHGFI 144
Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) (taxid: 246194)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 7
>sp|Q55673|MURA_SYNY3 UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=murA PE=3 SV=1 Back     alignment and function description
>sp|Q898X3|MURA2_CLOTE UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 OS=Clostridium tetani (strain Massachusetts / E88) GN=murA2 PE=3 SV=1 Back     alignment and function description
>sp|Q97F79|MURA1_CLOAB UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=murA1 PE=3 SV=1 Back     alignment and function description
>sp|A5EYD6|MURA_DICNV UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Dichelobacter nodosus (strain VCS1703A) GN=murA PE=3 SV=1 Back     alignment and function description
>sp|Q7NGP3|MURA_GLOVI UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Gloeobacter violaceus (strain PCC 7421) GN=murA PE=3 SV=1 Back     alignment and function description
>sp|Q3AAE9|MURA1_CARHZ UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=murA1 PE=3 SV=1 Back     alignment and function description
>sp|A4G9J3|MURA_HERAR UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Herminiimonas arsenicoxydans GN=murA PE=3 SV=1 Back     alignment and function description
>sp|Q2KTT8|MURA_BORA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Bordetella avium (strain 197N) GN=murA PE=3 SV=1 Back     alignment and function description
>sp|C0QDM7|MURA_DESAH UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=murA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query182
359493604 475 PREDICTED: UDP-N-acetylglucosamine 1-car 0.950 0.364 0.588 8e-48
307150992 436 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.835 0.348 0.477 7e-31
218247731 441 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.774 0.319 0.5 3e-30
218438772 441 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.752 0.310 0.521 4e-30
147839187 381 hypothetical protein VITISV_019596 [Viti 0.478 0.228 0.775 4e-30
428218476 463 UDP-N-acetylglucosamine1-carboxyvinyltra 0.813 0.319 0.476 5e-30
428224644 460 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.763 0.302 0.513 8e-30
428775040 455 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.807 0.323 0.493 9e-30
443477107 459 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.835 0.331 0.490 1e-29
434384503 444 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.774 0.317 0.513 1e-29
>gi|359493604|ref|XP_002283120.2| PREDICTED: UDP-N-acetylglucosamine 1-carboxyvinyltransferase-like [Vitis vinifera] gi|302142903|emb|CBI20198.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  195 bits (495), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 106/180 (58%), Positives = 127/180 (70%), Gaps = 7/180 (3%)

Query: 2   ATSLCYAKPLKPFSLQLPQT----QNPQIPTQTTQIREAETLTITGPTQLSGHVPISGSK 57
           +++LC+    KP+ +   +      + Q  T    +      TITG  +LSGHVPISGSK
Sbjct: 5   SSTLCHQNLTKPYFVSFHKQPHILSHLQFQTPPKTLTLDPKFTITGGCKLSGHVPISGSK 64

Query: 58  NSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVG 117
           NS+L +LAATL CS +  LH VP  LSDT+ M SILRSLG +IE    N E+ VN DGVG
Sbjct: 65  NSALSILAATLCCSGTSKLHGVPN-LSDTRTMASILRSLGVEIE--ACNGEMWVNADGVG 121

Query: 118 RVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEI 177
            V+PC E++ KIRGGFFVIGPLLARFGEAVV LPGGCDIG RPVDLY+RGLRALGA VE+
Sbjct: 122 SVQPCPEDIGKIRGGFFVIGPLLARFGEAVVALPGGCDIGTRPVDLYIRGLRALGAIVEL 181

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|307150992|ref|YP_003886376.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 7822] gi|306981220|gb|ADN13101.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 7822] Back     alignment and taxonomy information
>gi|218247731|ref|YP_002373102.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 8801] gi|257060932|ref|YP_003138820.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 8802] gi|218168209|gb|ACK66946.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 8801] gi|256591098|gb|ACV01985.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 8802] Back     alignment and taxonomy information
>gi|218438772|ref|YP_002377101.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 7424] gi|218171500|gb|ACK70233.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 7424] Back     alignment and taxonomy information
>gi|147839187|emb|CAN72374.1| hypothetical protein VITISV_019596 [Vitis vinifera] Back     alignment and taxonomy information
>gi|428218476|ref|YP_007102941.1| UDP-N-acetylglucosamine1-carboxyvinyltransferase [Pseudanabaena sp. PCC 7367] gi|427990258|gb|AFY70513.1| UDP-N-acetylglucosamine1-carboxyvinyltransferase [Pseudanabaena sp. PCC 7367] Back     alignment and taxonomy information
>gi|428224644|ref|YP_007108741.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Geitlerinema sp. PCC 7407] gi|427984545|gb|AFY65689.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Geitlerinema sp. PCC 7407] Back     alignment and taxonomy information
>gi|428775040|ref|YP_007166827.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Halothece sp. PCC 7418] gi|428689319|gb|AFZ42613.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Halothece sp. PCC 7418] Back     alignment and taxonomy information
>gi|443477107|ref|ZP_21066976.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Pseudanabaena biceps PCC 7429] gi|443017805|gb|ELS32168.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Pseudanabaena biceps PCC 7429] Back     alignment and taxonomy information
>gi|434384503|ref|YP_007095114.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Chamaesiphon minutus PCC 6605] gi|428015493|gb|AFY91587.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Chamaesiphon minutus PCC 6605] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query182
TIGR_CMR|CHY_2542 419 CHY_2542 "UDP-N-acetylglucosam 0.780 0.338 0.4 2.9e-23
TIGR_CMR|CJE_0945 418 CJE_0945 "UDP-N-acetylglucosam 0.747 0.325 0.388 2e-21
TIGR_CMR|SPO_A0137 421 SPO_A0137 "UDP-N-acetylglucosa 0.769 0.332 0.361 1e-19
TIGR_CMR|CBU_0751 434 CBU_0751 "UDP-N-acetylglucosam 0.763 0.320 0.375 1.5e-19
TIGR_CMR|CHY_2066 420 CHY_2066 "UDP-N-acetylglucosam 0.747 0.323 0.385 2.2e-19
TIGR_CMR|GSU_3102 417 GSU_3102 "UDP-N-acetylglucosam 0.769 0.335 0.370 1.6e-18
UNIPROTKB|P0A749 419 murA [Escherichia coli K-12 (t 0.730 0.317 0.364 2.2e-18
UNIPROTKB|Q9KP62 419 murA "UDP-N-acetylglucosamine 0.769 0.334 0.367 4.6e-17
TIGR_CMR|VC_2514 419 VC_2514 "UDP-N-acetylglucosami 0.769 0.334 0.367 4.6e-17
TIGR_CMR|BA_5578 429 BA_5578 "UDP-N-acetylglucosami 0.752 0.319 0.302 4.9e-16
TIGR_CMR|CHY_2542 CHY_2542 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
 Score = 270 (100.1 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 58/145 (40%), Positives = 84/145 (57%)

Query:    37 ETLTITGPTQLSGHVPISGSKXXXXXXXXXXXXXXXXXXXHNVPTGLSDTKAMLSILRSL 96
             E   I G  +L+G V ISG+K                     VP  L+D   ML +L++L
Sbjct:     2 EKFVIEGKQRLTGRVKISGAKNAALPILAGALLTGGTVRLTEVPE-LTDIYTMLEVLKAL 60

Query:    97 GAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDI 156
             GAK+ F+E   E++++T  +   E   E++RK+R  F V+GPLLAR G A + LPGGC I
Sbjct:    61 GAKVTFSEG--EVVLHTPEITSAEAPYEQVRKMRASFLVMGPLLARTGRARISLPGGCAI 118

Query:   157 GERPVDLYVRGLRALGAAVEISYVF 181
             G RP+DL+++G  ALGA +E+ + F
Sbjct:   119 GARPIDLHLKGFEALGAKIEMGHGF 143
GO:0008760 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity" evidence=ISS
GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS
TIGR_CMR|CJE_0945 CJE_0945 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_A0137 SPO_A0137 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0751 CBU_0751 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_2066 CHY_2066 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_3102 GSU_3102 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|P0A749 murA [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KP62 murA "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2514 VC_2514 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|BA_5578 BA_5578 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.5.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query182
PRK09369 417 PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carb 4e-56
COG0766 421 COG0766, MurA, UDP-N-acetylglucosamine enolpyruvyl 7e-53
cd01555 400 cd01555, UdpNAET, UDP-N-acetylglucosamine enolpyru 1e-52
TIGR01072 416 TIGR01072, murA, UDP-N-acetylglucosamine 1-carboxy 2e-46
PRK12830 417 PRK12830, PRK12830, UDP-N-acetylglucosamine 1-carb 2e-38
pfam00275 415 pfam00275, EPSP_synthase, EPSP synthase (3-phospho 1e-24
cd01554 408 cd01554, EPT-like, Enol pyruvate transferases fami 1e-15
cd01556 409 cd01556, EPSP_synthase, EPSP synthase domain 5e-09
PRK02427 435 PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvi 1e-07
COG0128 428 COG0128, AroA, 5-enolpyruvylshikimate-3-phosphate 4e-07
TIGR01356 409 TIGR01356, aroA, 3-phosphoshikimate 1-carboxyvinyl 5e-06
PLN02338 443 PLN02338, PLN02338, 3-phosphoshikimate 1-carboxyvi 4e-04
>gnl|CDD|236486 PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated Back     alignment and domain information 
 Score =  181 bits (463), Expect = 4e-56
 Identities = 71/141 (50%), Positives = 94/141 (66%), Gaps = 2/141 (1%)

Query: 37  ETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSL 96
           + L I G   LSG V ISG+KN++L +LAA+LL      L NVP  LSD + M+ +LRSL
Sbjct: 2   DKLVIEGGKPLSGEVTISGAKNAALPILAASLLAEEPVTLTNVPD-LSDVRTMIELLRSL 60

Query: 97  GAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDI 156
           GAK+EF+     + ++   +   E   E ++K+R    V+GPLLARFGEA V LPGGC I
Sbjct: 61  GAKVEFDGNG-TVTIDASNINNTEAPYELVKKMRASILVLGPLLARFGEAKVSLPGGCAI 119

Query: 157 GERPVDLYVRGLRALGAAVEI 177
           G RPVDL+++GL ALGA +EI
Sbjct: 120 GARPVDLHLKGLEALGAEIEI 140

Length = 417
>gnl|CDD|223837 COG0766, MurA, UDP-N-acetylglucosamine enolpyruvyl transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|238796 cd01555, UdpNAET, UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall Back     alignment and domain information
>gnl|CDD|162190 TIGR01072, murA, UDP-N-acetylglucosamine 1-carboxyvinyltransferase Back     alignment and domain information
>gnl|CDD|183779 PRK12830, PRK12830, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|215834 pfam00275, EPSP_synthase, EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Back     alignment and domain information
>gnl|CDD|238795 cd01554, EPT-like, Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine enolpyruvyl transferase Back     alignment and domain information
>gnl|CDD|238797 cd01556, EPSP_synthase, EPSP synthase domain Back     alignment and domain information
>gnl|CDD|235037 PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|223206 COG0128, AroA, 5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233373 TIGR01356, aroA, 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information
>gnl|CDD|177972 PLN02338, PLN02338, 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 182
COG0766 421 MurA UDP-N-acetylglucosamine enolpyruvyl transfera 99.96
COG0128 428 AroA 5-enolpyruvylshikimate-3-phosphate synthase [ 99.95
PRK09369 417 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.92
PLN02338 443 3-phosphoshikimate 1-carboxyvinyltransferase 99.92
PRK11861 673 bifunctional prephenate dehydrogenase/3-phosphoshi 99.92
PF00275 419 EPSP_synthase: EPSP synthase (3-phosphoshikimate 1 99.91
PRK12830 417 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.91
TIGR01072 416 murA UDP-N-acetylglucosamine 1-carboxyvinyltransfe 99.9
TIGR01356 409 aroA 3-phosphoshikimate 1-carboxyvinyltransferase. 99.89
cd01555 400 UdpNAET UDP-N-acetylglucosamine enolpyruvyl transf 99.88
PRK14806 735 bifunctional cyclohexadienyl dehydrogenase/ 3-phos 99.88
PRK02427 435 3-phosphoshikimate 1-carboxyvinyltransferase; Prov 99.87
PRK11860 661 bifunctional 3-phosphoshikimate 1-carboxyvinyltran 99.87
cd01556 409 EPSP_synthase EPSP synthase domain. 3-phosphoshiki 99.84
cd01554 408 EPT-like Enol pyruvate transferases family include 99.84
COG0128428 AroA 5-enolpyruvylshikimate-3-phosphate synthase [ 99.71
KOG0692 595 consensus Pentafunctional AROM protein [Amino acid 99.6
cd01554408 EPT-like Enol pyruvate transferases family include 99.45
PF00275419 EPSP_synthase: EPSP synthase (3-phosphoshikimate 1 99.45
TIGR01356409 aroA 3-phosphoshikimate 1-carboxyvinyltransferase. 99.43
PRK11861673 bifunctional prephenate dehydrogenase/3-phosphoshi 99.43
cd01556409 EPSP_synthase EPSP synthase domain. 3-phosphoshiki 99.35
PLN02338443 3-phosphoshikimate 1-carboxyvinyltransferase 99.31
PRK11860 661 bifunctional 3-phosphoshikimate 1-carboxyvinyltran 99.29
PRK09369417 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.29
TIGR01072416 murA UDP-N-acetylglucosamine 1-carboxyvinyltransfe 99.29
PRK02427435 3-phosphoshikimate 1-carboxyvinyltransferase; Prov 99.28
cd01555400 UdpNAET UDP-N-acetylglucosamine enolpyruvyl transf 99.27
PRK14806735 bifunctional cyclohexadienyl dehydrogenase/ 3-phos 99.23
PRK12830417 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.21
cd01553211 EPT_RTPC-like This domain family includes the Enol 98.97
COG0766 421 MurA UDP-N-acetylglucosamine enolpyruvyl transfera 98.81
KOG0692 595 consensus Pentafunctional AROM protein [Amino acid 97.44
cd01553211 EPT_RTPC-like This domain family includes the Enol 95.5
TIGR03399 326 RNA_3prim_cycl RNA 3'-phosphate cyclase. Members o 94.11
PRK04204 343 RNA 3'-terminal-phosphate cyclase; Provisional 93.33
COG0430 341 RCL1 RNA 3'-terminal phosphate cyclase [RNA proces 93.01
cd00295 338 RNA_Cyclase RNA 3' phosphate cyclase domain - RNA 92.66
TIGR03400 360 18S_RNA_Rcl1p 18S rRNA biogenesis protein RCL1. Me 91.12
cd00875 341 RNA_Cyclase_Class_I RNA 3' phosphate cyclase domai 90.71
cd00874 326 RNA_Cyclase_Class_II RNA 3' phosphate cyclase doma 89.16
PF01137228 RTC: RNA 3'-terminal phosphate cyclase; InterPro: 88.1
KOG3980 361 consensus RNA 3'-terminal phosphate cyclase [RNA p 87.81
>COG0766 MurA UDP-N-acetylglucosamine enolpyruvyl transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information 
Probab=99.96  E-value=3e-28  Score=212.89  Aligned_cols=145  Identities=50%  Similarity=0.812  Sum_probs=136.8

Q ss_pred             ccceEEcCCCccceEEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcCC
Q 030153           36 AETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDG  115 (182)
Q Consensus        36 m~~i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~~~  115 (182)
                      |+++.|.++.+++|+|+|.|.||+++++|+|++|++++++|+|+|. ..||+.++++|+.||++|++|. ++.++|+.++
T Consensus         1 M~k~~I~Gg~~L~G~V~IsGAKNaalpii~AtlLa~~~v~L~NvP~-l~DV~~~~~ll~~lG~~v~~~~-~~~~~i~~~~   78 (421)
T COG0766           1 MDKLIIEGGNPLNGEVTISGAKNAALPLLAATLLADEPVTLTNVPD-LSDVETMLELLRNLGAKVERDG-DGELEIDAPN   78 (421)
T ss_pred             CCEEEEeCCCccceEEEEeccHhHHHHHHHHHHhCCCcEEEeCCCC-hHHHHHHHHHHHHcCCEEEEcc-CceEEEcccc
Confidence            7889999999999999999999999999999999999999999999 9999999999999999999533 5889999988


Q ss_pred             CCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcCccC
Q 030153          116 VGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVFF  182 (182)
Q Consensus       116 ~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~~~~  182 (182)
                      ......|.+++...++|+++++|++++||+.++.++|+|.++.||++.|++.|++|||+++..++|+
T Consensus        79 i~~~~apy~~v~kmRASi~vlGplLaR~g~a~V~LPGGCaIG~RPvDlHl~gleaLGA~i~~e~g~i  145 (421)
T COG0766          79 INSTEAPYELVRKMRASILVLGPLLARFGKAKVSLPGGCAIGARPVDLHLKGLEALGAEIEIEHGYI  145 (421)
T ss_pred             cccccCCHHHHHHHHhHHHHHHHHHhhcCceEECCCCCccCCCCchhHHHHHHHHcCCEEEEcCCEE
Confidence            7777888889999999999999999999999999999999999999999999999999999888875

>COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09369 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated Back     alignment and domain information
>PLN02338 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information
>PRK11861 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>PF00275 EPSP_synthase: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); InterPro: IPR001986 This entry represents the core domain of 3-phosphoshikimate 1-carboxyvinyltransferase and UDP-N-acetylglucosamine 1-carboxyvinyltransferase Back     alignment and domain information
>PRK12830 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed Back     alignment and domain information
>TIGR01072 murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase Back     alignment and domain information
>TIGR01356 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information
>cd01555 UdpNAET UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall Back     alignment and domain information
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>PRK02427 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>PRK11860 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase; Provisional Back     alignment and domain information
>cd01556 EPSP_synthase EPSP synthase domain Back     alignment and domain information
>cd01554 EPT-like Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine enolpyruvyl transferase Back     alignment and domain information
>COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0692 consensus Pentafunctional AROM protein [Amino acid transport and metabolism] Back     alignment and domain information
>cd01554 EPT-like Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine enolpyruvyl transferase Back     alignment and domain information
>PF00275 EPSP_synthase: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); InterPro: IPR001986 This entry represents the core domain of 3-phosphoshikimate 1-carboxyvinyltransferase and UDP-N-acetylglucosamine 1-carboxyvinyltransferase Back     alignment and domain information
>TIGR01356 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information
>PRK11861 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>cd01556 EPSP_synthase EPSP synthase domain Back     alignment and domain information
>PLN02338 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information
>PRK11860 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase; Provisional Back     alignment and domain information
>PRK09369 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated Back     alignment and domain information
>TIGR01072 murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase Back     alignment and domain information
>PRK02427 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>cd01555 UdpNAET UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall Back     alignment and domain information
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>PRK12830 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed Back     alignment and domain information
>cd01553 EPT_RTPC-like This domain family includes the Enolpyruvate transferase (EPT) family and the RNA 3' phosphate cyclase family (RTPC) Back     alignment and domain information
>COG0766 MurA UDP-N-acetylglucosamine enolpyruvyl transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG0692 consensus Pentafunctional AROM protein [Amino acid transport and metabolism] Back     alignment and domain information
>cd01553 EPT_RTPC-like This domain family includes the Enolpyruvate transferase (EPT) family and the RNA 3' phosphate cyclase family (RTPC) Back     alignment and domain information
>TIGR03399 RNA_3prim_cycl RNA 3'-phosphate cyclase Back     alignment and domain information
>PRK04204 RNA 3'-terminal-phosphate cyclase; Provisional Back     alignment and domain information
>COG0430 RCL1 RNA 3'-terminal phosphate cyclase [RNA processing and modification] Back     alignment and domain information
>cd00295 RNA_Cyclase RNA 3' phosphate cyclase domain - RNA phosphate cyclases are enzymes that catalyze the ATP-dependent conversion of 3'-phosphate at the end of RNA into 2', 3'-cyclic phosphodiester bond Back     alignment and domain information
>TIGR03400 18S_RNA_Rcl1p 18S rRNA biogenesis protein RCL1 Back     alignment and domain information
>cd00875 RNA_Cyclase_Class_I RNA 3' phosphate cyclase domain (class I) This subfamily of cyclase-like proteins are encoded in eukaryotic genomes Back     alignment and domain information
>cd00874 RNA_Cyclase_Class_II RNA 3' phosphate cyclase domain (class II) Back     alignment and domain information
>PF01137 RTC: RNA 3'-terminal phosphate cyclase; InterPro: IPR023797 RNA cyclases are a family of RNA-modifying enzymes that are conserved in eukaryotes, bacteria and archaea Back     alignment and domain information
>KOG3980 consensus RNA 3'-terminal phosphate cyclase [RNA processing and modification] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query182
1naw_A 419 Enolpyruvyl Transferase Length = 419 3e-19
1uae_A 419 Structure Of Udp-N-Acetylglucosamine Enolpyruvyl Tr 5e-19
3iss_A 418 Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthas 2e-18
1q3g_A 419 Mura (Asp305ala) Liganded With Tetrahedral Reaction 2e-18
1ejc_A 419 Crystal Structure Of Unliganded Mura (Type2) Length 2e-18
3r38_A 454 2.23 Angstrom Resolution Crystal Structure Of Udp-N 4e-18
2z2c_A 423 Mura Inhibited By Unag-Cnicin Adduct Length = 423 4e-18
3kqj_A 419 Mura Binary Complex With Udp-N-Acetylglucosamine Le 5e-18
1a2n_A 419 Structure Of The C115a Mutant Of Mura Complexed Wit 7e-18
1dlg_A 419 Crystal Structure Of The C115s Enterobacter Cloacae 4e-17
3su9_A 419 E. Cloacae Mura In Complex With Udp-N-Acetylmuramic 5e-17
2yvw_A 425 Crystal Structure Of Udp-N-Acetylglucosamine 1-Carb 7e-17
3v4t_A 419 E. Cloacae C115d Mura Liganded With Unag Length = 4 7e-17
3swd_A 418 E. Coli Mura In Complex With Udp-N-Acetylmuramic Ac 9e-17
3vcy_A 430 Structure Of Mura (Udp-N-Acetylglucosamine Enolpyru 1e-16
3swa_A 419 E. Cloacae Mura R120a Complex With Unag And Covalen 3e-16
2rl1_A 424 Crystal Structure Of Udp-N-Acetylglucosamine Enolpy 7e-16
3sg1_A 458 2.6 Angstrom Crystal Structure Of Udp-N-Acetylgluco 1e-15
3swg_A 425 Aquifex Aeolicus Mura In Complex With Udp-N-Acetylm 1e-15
3swe_A 424 Haemophilus Influenzae Mura In Complex With Udp-N-A 1e-14
4fqd_A 479 Crystal Structure Of The Enolpyruvyl Transferase Ni 7e-05
>pdb|1NAW|A Chain A, Enolpyruvyl Transferase Length = 419 Back     alignment and structure 
Iteration: 1

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 41  ITGPTQLSGHVPISGSKXXXXXXXXXXXXXXXXXXXHNVPTGLSDTKAMLSILRSLGAKI 100
           + GPT+L G V ISG+K                    NVP  L D    + +L  LG K+
Sbjct: 6   VQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPK-LKDIDTTMKLLTQLGTKV 64
Query: 101 EFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERP 160
           E   RN  + ++   V       + ++ +R   + +GPL+ARFG+  V LPGGC IG RP
Sbjct: 65  E---RNGSVWIDASNVNNFSAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIGARP 121
Query: 161 VDLYVRGLRALGAAVEI 177
           VDL++ GL  LGA +++
Sbjct: 122 VDLHIFGLEKLGAEIKL 138
>pdb|1UAE|A Chain A, Structure Of Udp-N-Acetylglucosamine Enolpyruvyl Transferase Length = 419 Back     alignment and structure
>pdb|3ISS|A Chain A, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase (Mura):udp-N- Acetylmuramic Acid:phosphite From Escherichia Coli Length = 418 Back     alignment and structure
>pdb|1Q3G|A Chain A, Mura (Asp305ala) Liganded With Tetrahedral Reaction Intermediate Length = 419 Back     alignment and structure
>pdb|1EJC|A Chain A, Crystal Structure Of Unliganded Mura (Type2) Length = 419 Back     alignment and structure
>pdb|3R38|A Chain A, 2.23 Angstrom Resolution Crystal Structure Of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase (Mura) From Listeria Monocytogenes Egd-E Length = 454 Back     alignment and structure
>pdb|2Z2C|A Chain A, Mura Inhibited By Unag-Cnicin Adduct Length = 423 Back     alignment and structure
>pdb|3KQJ|A Chain A, Mura Binary Complex With Udp-N-Acetylglucosamine Length = 419 Back     alignment and structure
>pdb|1A2N|A Chain A, Structure Of The C115a Mutant Of Mura Complexed With The Fluorinated Analog Of The Reaction Tetrahedral Intermediate Length = 419 Back     alignment and structure
>pdb|1DLG|A Chain A, Crystal Structure Of The C115s Enterobacter Cloacae Mura In The Un- Liganded State Length = 419 Back     alignment and structure
>pdb|3SU9|A Chain A, E. Cloacae Mura In Complex With Udp-N-Acetylmuramic Acid And Covalent Adduct Of Pep With Cys115 Length = 419 Back     alignment and structure
>pdb|2YVW|A Chain A, Crystal Structure Of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Aquifex Aeolicus Vf5 Length = 425 Back     alignment and structure
>pdb|3V4T|A Chain A, E. Cloacae C115d Mura Liganded With Unag Length = 419 Back     alignment and structure
>pdb|3SWD|A Chain A, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And Covalent Adduct Of Pep With Cys115 Length = 418 Back     alignment and structure
>pdb|3VCY|A Chain A, Structure Of Mura (Udp-N-Acetylglucosamine Enolpyruvyl Transferase), From Vibrio Fischeri In Complex With Substrate Udp-N- Acetylglucosamine And The Drug Fosfomycin. Length = 430 Back     alignment and structure
>pdb|3SWA|A Chain A, E. Cloacae Mura R120a Complex With Unag And Covalent Adduct Of Pep With Cys115 Length = 419 Back     alignment and structure
>pdb|2RL1|A Chain A, Crystal Structure Of Udp-N-Acetylglucosamine Enolpyruvyl Transferase From Haemophilus Influenzae In Complex With Udp-N-Acetylglucosamine Length = 424 Back     alignment and structure
>pdb|3SG1|A Chain A, 2.6 Angstrom Crystal Structure Of Udp-N-Acetylglucosamine 1- Carboxyvinyltransferase 1 (Mura1) From Bacillus Anthracis Length = 458 Back     alignment and structure
>pdb|3SWG|A Chain A, Aquifex Aeolicus Mura In Complex With Udp-N-Acetylmuramic Acid And Covalent Adduct Of Pep With Cys124 Length = 425 Back     alignment and structure
>pdb|3SWE|A Chain A, Haemophilus Influenzae Mura In Complex With Udp-N-Acetylmuramic Acid And Covalent Adduct Of Pep With Cys117 Length = 424 Back     alignment and structure
>pdb|4FQD|A Chain A, Crystal Structure Of The Enolpyruvyl Transferase Niko From Streptomyces Tendae Length = 479 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query182
4fqd_A 479 NIKO protein; beta/alpha inverse barrel, enolpyruv 2e-55
1ejd_A 419 MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltran 2e-55
2yvw_A 425 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 2e-54
3r38_A 454 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 4e-54
3nvs_A 450 3-phosphoshikimate 1-carboxyvinyltransferase; stru 1e-14
2o0b_A 450 3-phosphoshikimate 1-carboxyvinyltransferase; shik 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
3rmt_A455 3-phosphoshikimate 1-carboxyvinyltransferase 1; st 6e-04
1rf6_A427 5-enolpyruvylshikimate-3-phosphate synthase; shiki 7e-04
>4fqd_A NIKO protein; beta/alpha inverse barrel, enolpyruvyl transferase, fosfomyc binding, transferase; 2.50A {Streptomyces tendae} Length = 479 Back     alignment and structure
 Score =  181 bits (461), Expect = 2e-55
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)

Query: 37  ETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSL 96
             L I G  +LSG V  SG K+S +  +AA    S    + N P  + +T  +  I R+ 
Sbjct: 14  PLLEIHGGNRLSGAVRTSGFKHSLVTTVAAAATASAPVRIENCPD-IVETAVLGEIFRAA 72

Query: 97  GAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDI 156
           GA   ++  ++   V+     R E   + + +I G  +++  L++R G A +   GGC I
Sbjct: 73  GAHAHYDGADETFTVDASAWDRAELPADLVGRIHGSLYLLPALVSRNGVARLSASGGCPI 132

Query: 157 GE----RPVDLYVRGLRALGAAVEI 177
           GE    RP +  +  +   G    +
Sbjct: 133 GEGPRGRPDEHLLDVMGRFGVTTRL 157
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ... Length = 419 Back     alignment and structure
>2yvw_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; peptidoglycan, structu genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus} PDB: 3swg_A* Length = 425 Back     alignment and structure
>3r38_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; biosynthesis and degradation of murein sacculus and peptidog infectious diseases; 2.23A {Listeria monocytogenes} PDB: 3sg1_A* Length = 454 Back     alignment and structure
>3nvs_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P SKM GPJ EPE; 1.02A {Vibrio cholerae} PDB: 1g6s_A* 1g6t_A* 1x8r_A* 1x8t_A* 2aa9_A* 2aay_A* 2pq9_A* 1eps_A 1mi4_A* 3fjz_A* 3fjx_A* 2qfs_A* 2qft_A* 2qfq_A* 2qfu_A* 3fk0_A* 3fk1_A* 1q36_A* 3ti2_A* 1p88_A ... Length = 450 Back     alignment and structure
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A Length = 450 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rmt_A 3-phosphoshikimate 1-carboxyvinyltransferase 1; structural genomics, protein structure initiative; 2.80A {Bacillus halodurans} Length = 455 Back     alignment and structure
>1rf6_A 5-enolpyruvylshikimate-3-phosphate synthase; shikimate pathway, EPSP synthase, glyphosate, PEP, transferase; HET: GPJ S3P; 1.90A {Streptococcus pneumoniae} SCOP: d.68.2.2 PDB: 1rf5_A 1rf4_A* Length = 427 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query182
2yvw_A 425 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.96
3r38_A 454 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.96
3rmt_A 455 3-phosphoshikimate 1-carboxyvinyltransferase 1; st 99.96
4fqd_A 479 NIKO protein; beta/alpha inverse barrel, enolpyruv 99.96
3slh_A 441 3-phosphoshikimate 1-carboxyvinyltransferase; stru 99.95
3nvs_A 450 3-phosphoshikimate 1-carboxyvinyltransferase; stru 99.95
1ejd_A 419 MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltran 99.93
1rf6_A 427 5-enolpyruvylshikimate-3-phosphate synthase; shiki 99.92
2pqc_A 445 3-phosphoshikimate 1-carboxyvinyltransferase; insi 99.92
2o0b_A 450 3-phosphoshikimate 1-carboxyvinyltransferase; shik 99.89
3rmt_A455 3-phosphoshikimate 1-carboxyvinyltransferase 1; st 99.59
3slh_A441 3-phosphoshikimate 1-carboxyvinyltransferase; stru 99.57
3nvs_A450 3-phosphoshikimate 1-carboxyvinyltransferase; stru 99.53
2o0b_A450 3-phosphoshikimate 1-carboxyvinyltransferase; shik 99.52
1rf6_A427 5-enolpyruvylshikimate-3-phosphate synthase; shiki 99.5
2yvw_A 425 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.47
2pqc_A445 3-phosphoshikimate 1-carboxyvinyltransferase; insi 99.41
1ejd_A419 MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltran 99.41
3r38_A 454 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.34
4fqd_A479 NIKO protein; beta/alpha inverse barrel, enolpyruv 99.24
3tut_A 358 RNA 3'-terminal phosphate cyclase; cyclase family, 94.97
3pqv_A 365 RCL1 protein; RTC-like, cyclase-like, modular, alp 89.87
>2yvw_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; peptidoglycan, structu genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus} PDB: 3swg_A* Back     alignment and structure
Probab=99.96  E-value=1.7e-29  Score=223.79  Aligned_cols=147  Identities=39%  Similarity=0.695  Sum_probs=130.7

Q ss_pred             chhhhccceEEcCCCccceEEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEE
Q 030153           31 TQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEIL  110 (182)
Q Consensus        31 ~~~~~m~~i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~  110 (182)
                      +..+-|+++.|+++++++|+|++|||||.++|++++|+|++|+++|+|++. ++|++.|+++|++||++|+  ++++.++
T Consensus         5 ~~~~~m~~~~i~~~~~l~G~v~vpgsKs~s~r~l~~aaLa~g~~~i~n~~~-~~D~~~~~~~l~~lG~~i~--~~~~~~~   81 (425)
T 2yvw_A            5 TLYTYRDYFVIRGGKPLTGKVKISGAKNAALPIMFATILTEEPCTITNVPD-LLDVRNTLLLLRELGAELE--FLNNTVF   81 (425)
T ss_dssp             ----CCCEEEEECCCCCEEEEECCBCHHHHHHHHHHGGGCSSCEEEESCCC-SHHHHHHHHHHHHTTCEEE--EETTEEE
T ss_pred             cccCCcceEEEeCCCcceEEEEccCcHHHHHHHHHHHHhCCCCEEEecCCc-hHHHHHHHHHHHHCCCEEE--EeCCEEE
Confidence            333448888899888899999999999999999999999999999999999 9999999999999999999  7778899


Q ss_pred             EEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcCcc
Q 030153          111 VNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVF  181 (182)
Q Consensus       111 I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~~~  181 (182)
                      |++ +..++..+.++++++|+++||++|++++++++.+.++|+++|++|||+.++++|++|||++++.+++
T Consensus        82 i~~-~~~~~~~p~~~~~~~rts~~~l~~l~a~~~~~~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~~~~g~  151 (425)
T 2yvw_A           82 INP-SINSFITNQEIIRRMRASVLSLGPLLGRFGRAVVGLPGGCSIGARPIDQHLKFFKEAGADVEVREGY  151 (425)
T ss_dssp             EEC-CCCCCEECHHHHHHCGGGGGGHHHHHHHHSEEEEECCCCBTTBCCCCHHHHHHHHHTTCEEEEETTE
T ss_pred             EEC-CCCCCCCchhhhcccchHHHHHHHHhccCCcEEEEECCCcccccCCHHHHHHHHHHCCCEEEecCCE
Confidence            999 6545566666799999999999999998887789999999999999999999999999999875554
>3r38_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; biosynthesis and degradation of murein sacculus and peptidog infectious diseases; 2.23A {Listeria monocytogenes} PDB: 3sg1_A* Back     alignment and structure
>3rmt_A 3-phosphoshikimate 1-carboxyvinyltransferase 1; structural genomics, protein structure initiative; 2.80A {Bacillus halodurans} Back     alignment and structure
>4fqd_A NIKO protein; beta/alpha inverse barrel, enolpyruvyl transferase, fosfomyc binding, transferase; 2.50A {Streptomyces tendae} Back     alignment and structure
>3slh_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P GPJ SKM PGE 1PE PG4; 1.70A {Coxiella burnetii} PDB: 3roi_A* 4egr_A* 4gfp_A 3tr1_A Back     alignment and structure
>3nvs_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P SKM GPJ EPE; 1.02A {Vibrio cholerae} PDB: 1g6s_A* 1g6t_A* 1x8r_A* 1x8t_A* 2aa9_A* 2aay_A* 2pq9_A* 1eps_A 1mi4_A* 3fjz_A* 3fjx_A* 2qfs_A* 2qft_A* 2qfq_A* 2qfu_A* 3fk0_A* 3fk1_A* 1q36_A* 3ti2_A* 1p88_A ... Back     alignment and structure
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ... Back     alignment and structure
>1rf6_A 5-enolpyruvylshikimate-3-phosphate synthase; shikimate pathway, EPSP synthase, glyphosate, PEP, transferase; HET: GPJ S3P; 1.90A {Streptococcus pneumoniae} SCOP: d.68.2.2 PDB: 1rf5_A 1rf4_A* Back     alignment and structure
>2pqc_A 3-phosphoshikimate 1-carboxyvinyltransferase; inside-OUT alpha/beta barrel; HET: RC1; 1.60A {Agrobacterium SP} PDB: 2pqb_A* 2gg6_A* 2gg4_A* 2gga_A* 2ggd_A* 2pqd_A* Back     alignment and structure
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A Back     alignment and structure
>3rmt_A 3-phosphoshikimate 1-carboxyvinyltransferase 1; structural genomics, protein structure initiative; 2.80A {Bacillus halodurans} Back     alignment and structure
>3slh_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P GPJ SKM PGE 1PE PG4; 1.70A {Coxiella burnetii} PDB: 3roi_A* 4egr_A* 4gfp_A 3tr1_A Back     alignment and structure
>3nvs_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P SKM GPJ EPE; 1.02A {Vibrio cholerae} PDB: 1g6s_A* 1g6t_A* 1x8r_A* 1x8t_A* 2aa9_A* 2aay_A* 2pq9_A* 1eps_A 1mi4_A* 3fjz_A* 3fjx_A* 2qfs_A* 2qft_A* 2qfq_A* 2qfu_A* 3fk0_A* 3fk1_A* 1q36_A* 3ti2_A* 1p88_A ... Back     alignment and structure
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A Back     alignment and structure
>1rf6_A 5-enolpyruvylshikimate-3-phosphate synthase; shikimate pathway, EPSP synthase, glyphosate, PEP, transferase; HET: GPJ S3P; 1.90A {Streptococcus pneumoniae} SCOP: d.68.2.2 PDB: 1rf5_A 1rf4_A* Back     alignment and structure
>2yvw_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; peptidoglycan, structu genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus} PDB: 3swg_A* Back     alignment and structure
>2pqc_A 3-phosphoshikimate 1-carboxyvinyltransferase; inside-OUT alpha/beta barrel; HET: RC1; 1.60A {Agrobacterium SP} PDB: 2pqb_A* 2gg6_A* 2gg4_A* 2gga_A* 2ggd_A* 2pqd_A* Back     alignment and structure
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ... Back     alignment and structure
>3r38_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; biosynthesis and degradation of murein sacculus and peptidog infectious diseases; 2.23A {Listeria monocytogenes} PDB: 3sg1_A* Back     alignment and structure
>4fqd_A NIKO protein; beta/alpha inverse barrel, enolpyruvyl transferase, fosfomyc binding, transferase; 2.50A {Streptomyces tendae} Back     alignment and structure
>3tut_A RNA 3'-terminal phosphate cyclase; cyclase family, cyclization of RNA 3'-phosphate ENDS, transf; HET: ATP; 1.58A {Escherichia coli} PDB: 3tux_A* 3tv1_A* 3tw3_A* 3kgd_A* 1qmh_A* 1qmi_A Back     alignment and structure
>3pqv_A RCL1 protein; RTC-like, cyclase-like, modular, alpha-beta, anion pocket, R biogenesis, unknown function; HET: TAR; 2.61A {Kluyveromyces lactis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 182
d1ejda_ 419 d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl 1e-29
d1g6sa_ 427 d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate 7e-22
d1rf6a_ 427 d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate 1e-16
d1p88a_216 d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate 2e-05
>d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]} Length = 419 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: EPT/RTPC-like
family: Enolpyruvate transferase, EPT
domain: UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ)
species: Enterobacter cloacae [TaxId: 550]

 Score =  110 bits (275), Expect = 1e-29
 Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 4/141 (2%)

Query: 37  ETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSL 96
           +   + GPT+L G V ISG+KN++L +L A LL      + NVP  L D    + +L  L
Sbjct: 2   DKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPK-LKDIDTTMKLLTQL 60

Query: 97  GAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDI 156
           G K+   ER+  + ++   V       + ++ +R   + +GPL+ARFG+  V LPGGC I
Sbjct: 61  GTKV---ERDGSVWIDASNVNNFSAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAI 117

Query: 157 GERPVDLYVRGLRALGAAVEI 177
           G RPVDL++ GL  LGA +++
Sbjct: 118 GARPVDLHIFGLEKLGAEIKL 138
>d1g6sa_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Length = 427 Back     information, alignment and structure
>d1rf6a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Streptococcus pneumoniae [TaxId: 1313]} Length = 427 Back     information, alignment and structure
>d1p88a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Length = 216 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query182
d1ejda_ 419 UDP-N-acetylglucosamine enolpyruvyl transferase (E 99.96
d1g6sa_ 427 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 99.95
d1rf6a_ 427 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 99.95
d1p88a_216 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 99.65
d1rf6a_427 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 99.44
d1g6sa_427 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 99.35
d1ejda_419 UDP-N-acetylglucosamine enolpyruvyl transferase (E 99.22
d1p88a_216 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 97.3
d1qmha2239 RNA 3'-terminal phosphate cyclase, RPTC {Escherich 94.49
>d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: EPT/RTPC-like
family: Enolpyruvate transferase, EPT
domain: UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ)
species: Enterobacter cloacae [TaxId: 550]

Probab=99.96  E-value=8.9e-29  Score=216.02  Aligned_cols=141  Identities=37%  Similarity=0.674  Sum_probs=121.5

Q ss_pred             ccceEEcCCCccceEEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcCC
Q 030153           36 AETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDG  115 (182)
Q Consensus        36 m~~i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~~~  115 (182)
                      |+++.|+|+++++|+|++|||||.++|+|++|+|++|+++|+|++. ++|+++|+++|++|||+|+  ++ +++.|.+.+
T Consensus         1 M~~~~i~g~~~L~G~V~ipgsKS~s~Rali~aaLa~g~s~I~n~l~-s~D~~~~~~al~~LG~~I~--~~-~~~~I~~~~   76 (419)
T d1ejda_           1 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPK-LKDIDTTMKLLTQLGTKVE--RD-GSVWIDASN   76 (419)
T ss_dssp             CEEEEEEECCCCEEEEECCBCHHHHHHHHHHGGGBSSCEEEESCCC-CHHHHHHHHHHHHTTCEEE--ES-SSEEEECTT
T ss_pred             CCeEEEeCCCeeEEEEECCCcHHHHHHHHHHHHHcCCCEEEccCCc-cHHHHHHHHHHHHCCCEEE--EC-CEEEEECCC
Confidence            7889999888999999999999999999999999999999999999 9999999999999999999  65 457888877


Q ss_pred             CCCCCCChhh-hhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcCcc
Q 030153          116 VGRVEPCLEE-MRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVF  181 (182)
Q Consensus       116 ~~~~~~~~~~-~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~~~  181 (182)
                      ...+..+.+. .+++++.++ +++++++++.+.+.++|+++|++|||++++++|++||++++..+++
T Consensus        77 ~~~~~~~~~~~~~~~~t~~~-~~~~~a~~~~~~~~l~Gd~sL~~RPm~~li~~L~~lGa~i~~~~g~  142 (419)
T d1ejda_          77 VNNFSAPYDLVKTMRASIWA-LGPLVARFGQGQVSLPGGCAIGARPVDLHIFGLEKLGAEIKLEEGY  142 (419)
T ss_dssp             CCCCEECHHHHTTCGGGGGG-HHHHHHHHSEEEEECCCCSCCSSCTTHHHHHHHHHTTCEEEEETTE
T ss_pred             CCCCccchhhhhcccccccc-cchhhhhcCCcccccccccccCCCchhHHHHHHHhcceeEEecCCc
Confidence            6656556554 344455544 4466667787889999999999999999999999999999987764
>d1g6sa_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rf6a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1p88a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rf6a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1g6sa_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1p88a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qmha2 d.68.2.1 (A:5-184,A:280-338) RNA 3'-terminal phosphate cyclase, RPTC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure