Citrus Sinensis ID: 030179

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
Protein Sequence
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLGGVTLCVDHSLIP
Secondary Structure (PSIPRED)
cEEEEcccccccccccHHHHHHHHHccEEEEccccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHccccEEEEccccHHHHHHHcccccEEEccEEEEEEEEcccccccHHHHHHHHHHccccEEEEEccEEccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccccccEHHHHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHcccEEEEcHHHHHccHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHccccEEEEEccHHHHHHHHHccEEEccccEEEEEccccccccccHHHHHHHHHHcccEEEEEEEHHHccccccccc
Coil and Loop (DISEMBL)
MLYIIGlglgderdITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVvgdpfgatthTDLVVRAKKLGIQVKAVHNASVMNAVGICGlqlyrfgetvsipfftetwrpgsfyekikrnrslglHTLCLLGGVTlcvdhslip
Flexible Loop (DISEMBL)
mlyiiglglgderdiTLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFftetwrpgsfyEKIKRNRSLGLHTLCLLGGVTLCVDHSLIP
Low Complexity Region (SEG)
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLGGVTLCVDHSLIP
Disordered region (IsUnstruct)
*LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADR*****************NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLGGVTLCVDHS***
Disordered Region (DISOPRED)
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLGGVTLC*******
Disordered Region (DISEMBL)
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLGGVTLCVDHSLIP
Disordered Region (DISPRO)
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLGGVTLCVDH****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLGGVTLCVDHSLIP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	181	2.2.26 [Sep-21-2011]
O81769	277	Probable diphthine syntha	yes	no	0.928	0.606	0.833	8e-79
Q9CWQ0	281	Diphthine synthase OS=Mus	yes	no	0.900	0.580	0.648	8e-62
Q6C1E0	300	Diphthine synthase OS=Yar	yes	no	0.906	0.546	0.648	3e-61
Q9H2P9	285	Diphthine synthase OS=Hom	yes	no	0.900	0.571	0.642	4e-61
Q6BN80	300	Diphthine synthase OS=Deb	yes	no	0.906	0.546	0.654	2e-60
Q5E982	285	Diphthine synthase OS=Bos	yes	no	0.900	0.571	0.630	6e-60
Q59NX9	299	Diphthine synthase OS=Can	N/A	no	0.906	0.548	0.642	4e-59
Q75JG8	273	Diphthine synthase OS=Dic	yes	no	0.911	0.604	0.636	2e-58
Q7S949	287	Diphthine synthase OS=Neu	N/A	no	0.900	0.567	0.619	4e-57
Q754E7	298	Diphthine synthase OS=Ash	yes	no	0.906	0.550	0.625	1e-56

>sp|O81769|DPH5_ARATH Probable diphthine synthase OS=Arabidopsis thaliana GN=At4g31790 PE=2 SV=1

 Score =  292 bits (748), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 140/168 (83%), Positives = 154/168 (91%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITLRGLEAVKK  KVY+EAYTSLLSFGLS DGLS LEK YGKPI L
Sbjct: 1   MLYIIGLGLGDEKDITLRGLEAVKKSQKVYMEAYTSLLSFGLSADGLSNLEKFYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKA  ++ E+ +++VAFLVVGDPFGATTH+DLVVRAK LG++V+ VHNASVMN
Sbjct: 61  ADREMVEEKAGDMIDEAIDNDVAFLVVGDPFGATTHSDLVVRAKTLGVKVEVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVGICGLQLY +GETVSIPFFTETWRP SFYEKIK+NRSLGLHTLCLL
Sbjct: 121 AVGICGLQLYHYGETVSIPFFTETWRPDSFYEKIKKNRSLGLHTLCLL 168

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 9EC: 8

>sp|Q9CWQ0|DPH5_MOUSE Diphthine synthase OS=Mus musculus GN=Dph5 PE=2 SV=2

 Score =  236 bits (601), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 109/168 (64%), Positives = 139/168 (82%), Gaps = 5/168 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct: 1   MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVL-----TVGKEALEEFYGRKLIL 55

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE VE++AD I  ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct: 56  ADREEVEQEADNIFKDADVSDVAFLVVGDPFGATTHSDLILRATKLGIPYQVIHNASIMN 115

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVG CGLQLYRFGETVSI F+T+TWRP SF++K+KRNR+ G+HTLCLL
Sbjct: 116 AVGCCGLQLYRFGETVSIVFWTDTWRPESFFDKVKRNRANGMHTLCLL 163

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q6C1E0|DPH5_YARLI Diphthine synthase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DPH5 PE=3 SV=1

 Score =  234 bits (596), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 109/168 (64%), Positives = 136/168 (80%), Gaps = 4/168 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           ML++IGLGL  E DIT+RGLE +KKC +VY+EAYTS+L          TLEK YGK + L
Sbjct: 1   MLHLIGLGLSHETDITVRGLETIKKCKRVYLEAYTSILMAAEK----ETLEKFYGKELIL 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVE+ +D IL+ +QE ++AFLVVGDPFGATTHTDLV+RA++LGI+ + +HNASVMN
Sbjct: 57  ADREMVEQASDDILAGAQEDDIAFLVVGDPFGATTHTDLVIRARELGIKYQTIHNASVMN 116

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVG CGLQLY FG+TVS+ FFT++W+P SFY+KI  NR +GLHTL LL
Sbjct: 117 AVGACGLQLYNFGQTVSLVFFTDSWKPDSFYDKIHENRKIGLHTLVLL 164

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q9H2P9|DPH5_HUMAN Diphthine synthase OS=Homo sapiens GN=DPH5 PE=1 SV=2

 Score =  233 bits (595), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 108/168 (64%), Positives = 139/168 (82%), Gaps = 5/168 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + +
Sbjct: 1   MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVL-----TVGKEALEEFYGRKLVV 55

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE VE++AD IL ++  S+VAFLVVGDPFGATTH+DLV+RA KLGI  + +HNAS+MN
Sbjct: 56  ADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMN 115

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVG CGLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLL
Sbjct: 116 AVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLL 163

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q6BN80|DPH5_DEBHA Diphthine synthase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DPH5 PE=3 SV=1

 Score =  231 bits (589), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/168 (65%), Positives = 134/168 (79%), Gaps = 4/168 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGL  E DIT+RGLE +KKC +VY+EAYTS+L          +LE  YG+ I L
Sbjct: 1   MLYLIGLGLSYESDITVRGLETIKKCKRVYLEAYTSILMAA----NQESLEAFYGREIIL 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE+VE  +DKIL  + E +VAFLVVGDPFGATTHTDL++RA++L I+V+A+HNASVMN
Sbjct: 57  ADRELVEGGSDKILENADEDDVAFLVVGDPFGATTHTDLIIRARELNIKVEAIHNASVMN 116

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVG CGLQLY+FG+TVS+ FFTETW+P SFY KI  NR +GLHTL LL
Sbjct: 117 AVGACGLQLYQFGQTVSLVFFTETWKPDSFYNKIMENRRIGLHTLLLL 164

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q5E982|DPH5_BOVIN Diphthine synthase OS=Bos taurus GN=DPH5 PE=2 SV=1

 Score =  229 bits (585), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 106/168 (63%), Positives = 137/168 (81%), Gaps = 5/168 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGLGD +DIT++GLE V++C +VY+E YTS+L     T G   LE+ Y + + L
Sbjct: 1   MLYMIGLGLGDAKDITVKGLEVVRRCSRVYLETYTSVL-----TVGKEVLEEFYERKLIL 55

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE VE++AD IL ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct: 56  ADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLILRATKLGIPYRVIHNASIMN 115

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVG CGLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLL
Sbjct: 116 AVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLL 163

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q59NX9|DPH5_CANAL Diphthine synthase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DPH5 PE=3 SV=1

 Score =  226 bits (577), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 108/168 (64%), Positives = 134/168 (79%), Gaps = 4/168 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGL  E DIT+RGLE VKKC +VY+EAYTS+L          +LEK Y + I L
Sbjct: 1   MLYLIGLGLSYESDITVRGLETVKKCKRVYLEAYTSILMAA----NQESLEKFYSREIIL 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE+VE  +D IL ++ + +VAFLVVGDPFGATTHTDLV+RA++LGI+V+ +HNASVMN
Sbjct: 57  ADRELVETGSDDILKDADKEDVAFLVVGDPFGATTHTDLVIRARELGIKVETIHNASVMN 116

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVG CGLQLY+FG+TVS+ FFT++W+P SFY KI  NR +GLHTL LL
Sbjct: 117 AVGACGLQLYQFGQTVSLVFFTDSWKPDSFYGKIMENRKIGLHTLLLL 164

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q75JG8|DPH5_DICDI Diphthine synthase OS=Dictyostelium discoideum GN=dph5 PE=3 SV=1

 Score =  224 bits (571), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 107/168 (63%), Positives = 138/168 (82%), Gaps = 3/168 (1%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LYIIGLGLGDE+D+T++G EA+KK  K+Y+EAYTSLL  G ST  +  LEK Y K I +
Sbjct: 2   VLYIIGLGLGDEKDVTIKGFEAIKKSSKIYLEAYTSLL--GGST-SIEALEKFYEKKIII 58

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVE   +++L ES E++V+FLVVGDPFGATTHTDLV+RAK+L I VK +HNAS+MN
Sbjct: 59  ADREMVESGCEEMLKESTENDVSFLVVGDPFGATTHTDLVIRAKELSIPVKVIHNASIMN 118

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           A+G CGLQLY +G+T+S+ FFTET +P S+Y+++K NR  G+HTLCLL
Sbjct: 119 AIGCCGLQLYSYGQTISMVFFTETTKPDSWYDRVKINRVNGMHTLCLL 166

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q7S949|DPH5_NEUCR Diphthine synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dph-5 PE=3 SV=1

 Score =  220 bits (560), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 104/168 (61%), Positives = 134/168 (79%), Gaps = 5/168 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY++GLGL DE DIT++GLE VKK ++VY+EAYTS+L    +T     LE  YG+PI +
Sbjct: 1   MLYLVGLGLSDETDITVKGLEVVKKAERVYLEAYTSILLVDQAT-----LESYYGRPIVV 55

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVE  +D+IL ++ + +VAF VVGDPFGATTHTDLV+RA++LGIQV+ V NAS+M+
Sbjct: 56  ADREMVESNSDEILRDADKVDVAFCVVGDPFGATTHTDLVLRARELGIQVRTVPNASIMS 115

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
            +G  GLQLY FG+TVS+ FF + WRP SFY++IK NRS+GLHTL LL
Sbjct: 116 GIGAAGLQLYNFGQTVSMVFFLDNWRPASFYDRIKENRSIGLHTLVLL 163

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q754E7|DPH5_ASHGO Diphthine synthase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DPH5 PE=3 SV=1

 Score =  218 bits (556), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 105/168 (62%), Positives = 131/168 (77%), Gaps = 4/168 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           ML+++GLGL    DIT+RGL AVK+C +VY+E YTS+L     T     LE  YGKP+ L
Sbjct: 1   MLFLVGLGLSSHEDITVRGLNAVKRCARVYLEHYTSILM----TASKEELEGFYGKPVVL 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVE   ++IL ++ + +VAFLVVGDPFGATTHTDLV+RAKK GI V+ VHNASVMN
Sbjct: 57  ADREMVESGCEEILRDADKEDVAFLVVGDPFGATTHTDLVLRAKKQGIVVEVVHNASVMN 116

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVG CGLQLY FG+T+S+ FFT++WRP S+Y+K+  NR +GLHTL LL
Sbjct: 117 AVGSCGLQLYNFGQTISMVFFTDSWRPDSWYDKVLENRRIGLHTLVLL 164

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
225458011	285	PREDICTED: probable diphthine synthase i	0.928	0.589	0.863	3e-81
357466919	274	Diphthine synthase [Medicago truncatula]	0.928	0.613	0.857	7e-81
356575604	278	PREDICTED: probable diphthine synthase-l	0.928	0.604	0.851	8e-81
255637764	278	unknown [Glycine max]	0.928	0.604	0.851	8e-81
224062019	285	predicted protein [Populus trichocarpa]	0.928	0.589	0.845	1e-80
356521535	274	PREDICTED: probable diphthine synthase-l	0.928	0.613	0.851	2e-80
255538906	285	diphthine synthase, putative [Ricinus co	0.928	0.589	0.863	4e-80
353441140	242	granule diphthine synthase [Elaeis guine	0.928	0.694	0.821	9e-79
449469897	286	PREDICTED: probable diphthine synthase-l	0.928	0.587	0.821	1e-77
15236075	277	diphthine synthase [Arabidopsis thaliana	0.928	0.606	0.833	4e-77

>gi|225458011|ref|XP_002280149.1| PREDICTED: probable diphthine synthase isoform 1 [Vitis vinifera] gi|359492226|ref|XP_003634386.1| PREDICTED: probable diphthine synthase isoform 2 [Vitis vinifera] gi|302142643|emb|CBI19846.3| unnamed protein product [Vitis vinifera]

 Score =  305 bits (782), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 145/168 (86%), Positives = 158/168 (94%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDERDITLRGLEAVKKC KV+IEAYTSLLSFGLS++GLSTLE LYGKPI L
Sbjct: 1   MLYIIGLGLGDERDITLRGLEAVKKCSKVFIEAYTSLLSFGLSSNGLSTLENLYGKPITL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD ILS+++ S+V FLVVGDPFGATTH+DLVVRAKKLG+ VK VHNASVMN
Sbjct: 61  ADREMVEEKADDILSDARHSDVGFLVVGDPFGATTHSDLVVRAKKLGVDVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           A+GICGLQLYR+GET+SIPFFTETWRP SFYEKI+RNR LGLHTLCLL
Sbjct: 121 AIGICGLQLYRYGETISIPFFTETWRPDSFYEKIQRNRVLGLHTLCLL 168

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466919|ref|XP_003603744.1| Diphthine synthase [Medicago truncatula] gi|355492792|gb|AES73995.1| Diphthine synthase [Medicago truncatula]

 Score =  305 bits (780), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 144/168 (85%), Positives = 160/168 (95%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITL+GLEA++KCDKVY+EAYTSLLSFGLS+ GLS LEKLYGKPI L
Sbjct: 1   MLYIIGLGLGDEQDITLKGLEAIQKCDKVYMEAYTSLLSFGLSSHGLSNLEKLYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD ILS++Q S+ AFLVVGDPFGATTHTDLVVRAKK+GI+VK VHNASVMN
Sbjct: 61  ADREMVEEKADDILSQAQLSHSAFLVVGDPFGATTHTDLVVRAKKMGIEVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           A+GICGLQLYR+GETVSIPFFTETWRP SFYEKI++NR+LGLHTLCLL
Sbjct: 121 AIGICGLQLYRYGETVSIPFFTETWRPDSFYEKIQQNRNLGLHTLCLL 168

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575604|ref|XP_003555929.1| PREDICTED: probable diphthine synthase-like [Glycine max]

 Score =  304 bits (779), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 143/168 (85%), Positives = 159/168 (94%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITL+GLEAVKKC KVY+EAYTSLLSFGLST+G+S LEKLYGKPI L
Sbjct: 1   MLYIIGLGLGDEQDITLKGLEAVKKCSKVYMEAYTSLLSFGLSTNGISNLEKLYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD+ILSE+  ++VAFLVVGDPFGATTHTDLVVRAKK+ I+VK VHNASVMN
Sbjct: 61  ADREMVEEKADEILSEADHAHVAFLVVGDPFGATTHTDLVVRAKKMAIEVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           A+G+CGLQLYR+GETVSIPFFTETWRP SFYEKI+RN S+GLHTLCLL
Sbjct: 121 AIGVCGLQLYRYGETVSIPFFTETWRPDSFYEKIQRNLSMGLHTLCLL 168

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637764|gb|ACU19204.1| unknown [Glycine max]

 Score =  304 bits (779), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 143/168 (85%), Positives = 159/168 (94%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITL+GLEAVKKC KVY+EAYTSLLSFGLST+G+S LEKLYGKPI L
Sbjct: 1   MLYIIGLGLGDEQDITLKGLEAVKKCSKVYMEAYTSLLSFGLSTNGISNLEKLYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD+ILSE+  ++VAFLVVGDPFGATTHTDLVVRAKK+ I+VK VHNASVMN
Sbjct: 61  ADREMVEEKADEILSEADHAHVAFLVVGDPFGATTHTDLVVRAKKMAIEVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           A+G+CGLQLYR+GETVSIPFFTETWRP SFYEKI+RN S+GLHTLCLL
Sbjct: 121 AIGVCGLQLYRYGETVSIPFFTETWRPDSFYEKIQRNLSMGLHTLCLL 168

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062019|ref|XP_002300714.1| predicted protein [Populus trichocarpa] gi|222842440|gb|EEE79987.1| predicted protein [Populus trichocarpa]

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 142/168 (84%), Positives = 159/168 (94%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGLGDE+DITLRGLEAVKKC+KVY+EAYTSLLSFGLSTDGLSTLEKLYGKPI +
Sbjct: 1   MLYLIGLGLGDEKDITLRGLEAVKKCEKVYMEAYTSLLSFGLSTDGLSTLEKLYGKPITV 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEK D +LSE+   +VAFLVVGDPFGATTHTDLVVRAK+LG++VK +HNASVMN
Sbjct: 61  ADREMVEEKVDSVLSEATSFDVAFLVVGDPFGATTHTDLVVRAKELGVEVKVIHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVGICGLQLYR+GET+SIPFFT+TW+P SFYEKI+RNR LGLHTLCLL
Sbjct: 121 AVGICGLQLYRYGETISIPFFTDTWKPDSFYEKIQRNRELGLHTLCLL 168

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521535|ref|XP_003529410.1| PREDICTED: probable diphthine synthase-like [Glycine max]

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 143/168 (85%), Positives = 158/168 (94%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITL+GLEAVKKCDKVY+EAYTSLLSFGLST+G+S LEKLYGKPI L
Sbjct: 1   MLYIIGLGLGDEKDITLKGLEAVKKCDKVYMEAYTSLLSFGLSTNGISNLEKLYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKA +ILSE+   +VAFLVVGDPFGATTHTDLVVRA K+GI+VK VHNASVMN
Sbjct: 61  ADREMVEEKAHEILSEADHGHVAFLVVGDPFGATTHTDLVVRANKMGIEVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           A+G+CGLQLYR+GETVSIPFFTETWRP SFYEKI+RNR +GLHTLCLL
Sbjct: 121 AIGVCGLQLYRYGETVSIPFFTETWRPDSFYEKIQRNRMMGLHTLCLL 168

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538906|ref|XP_002510518.1| diphthine synthase, putative [Ricinus communis] gi|223551219|gb|EEF52705.1| diphthine synthase, putative [Ricinus communis]

 Score =  302 bits (773), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 145/168 (86%), Positives = 156/168 (92%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLG+E+DITLRGLEAVKKC+KVY+EAYTSLLSFGLSTDGLS LE LYGKPI +
Sbjct: 1   MLYIIGLGLGNEKDITLRGLEAVKKCEKVYMEAYTSLLSFGLSTDGLSNLENLYGKPIII 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD++LS +  S+VAFLVVGDPFGATTHTDLVVRAK LGI VK VHNASVMN
Sbjct: 61  ADREMVEEKADEMLSAASSSDVAFLVVGDPFGATTHTDLVVRAKTLGIDVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVGICGLQLYR+GETVSIPFFT+ WRPGSFYEKIK NR LGLHTLCLL
Sbjct: 121 AVGICGLQLYRYGETVSIPFFTDNWRPGSFYEKIKTNRDLGLHTLCLL 168

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|353441140|gb|AEQ94154.1| granule diphthine synthase [Elaeis guineensis]

 Score =  297 bits (761), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 138/168 (82%), Positives = 157/168 (93%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYI+GLGLGDERDITLRGL+AV+ C KVY+EAYTSLL FG+S+DGLS LEKLYGK I +
Sbjct: 1   MLYIVGLGLGDERDITLRGLDAVRSCHKVYVEAYTSLLCFGISSDGLSRLEKLYGKEITV 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEE+AD +LSE+ ES+VAFLVVGDPFGATTHTDLVVRA+KLGI+VK +HNASVMN
Sbjct: 61  ADREMVEERADVMLSEASESDVAFLVVGDPFGATTHTDLVVRARKLGIKVKVIHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVG+CGLQLYR+GETVSIPFFTETWRP SFY+KI+RN+ LGLHTLCLL
Sbjct: 121 AVGVCGLQLYRYGETVSIPFFTETWRPDSFYQKIQRNQQLGLHTLCLL 168

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469897|ref|XP_004152655.1| PREDICTED: probable diphthine synthase-like [Cucumis sativus]

 Score =  294 bits (753), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 138/168 (82%), Positives = 159/168 (94%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITLRGLE V+KC+KVY+EAYTSLLSFGL++DG+S+LEKLYGK I +
Sbjct: 1   MLYIIGLGLGDEKDITLRGLECVRKCEKVYMEAYTSLLSFGLASDGISSLEKLYGKTITV 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD+ILSE++ S+VAFLVVGD FGATTH+DLVVRAK LGI+V+ V+NASVMN
Sbjct: 61  ADREMVEEKADQILSEARTSDVAFLVVGDAFGATTHSDLVVRAKSLGIEVRVVYNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVGICGLQLYR+GETVSIPFFTETW+P SFYEKI++NR LGLHTLCLL
Sbjct: 121 AVGICGLQLYRYGETVSIPFFTETWKPSSFYEKIQKNRGLGLHTLCLL 168

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15236075|ref|NP_194907.1| diphthine synthase [Arabidopsis thaliana] gi|42573117|ref|NP_974655.1| diphthine synthase [Arabidopsis thaliana] gi|38258855|sp|O81769.1|DPH5_ARATH RecName: Full=Probable diphthine synthase; AltName: Full=Diphthamide biosynthesis methyltransferase gi|13605813|gb|AAK32892.1|AF367305_1 AT4g31790/F28M20_20 [Arabidopsis thaliana] gi|3281849|emb|CAA19744.1| methyltransferase - like protein [Arabidopsis thaliana] gi|7270082|emb|CAB79897.1| methyltransferase-like protein [Arabidopsis thaliana] gi|23505927|gb|AAN28823.1| At4g31790/F28M20_20 [Arabidopsis thaliana] gi|332660558|gb|AEE85958.1| diphthine synthase [Arabidopsis thaliana] gi|332660559|gb|AEE85959.1| diphthine synthase [Arabidopsis thaliana]

 Score =  292 bits (748), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 140/168 (83%), Positives = 154/168 (91%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITLRGLEAVKK  KVY+EAYTSLLSFGLS DGLS LEK YGKPI L
Sbjct: 1   MLYIIGLGLGDEKDITLRGLEAVKKSQKVYMEAYTSLLSFGLSADGLSNLEKFYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKA  ++ E+ +++VAFLVVGDPFGATTH+DLVVRAK LG++V+ VHNASVMN
Sbjct: 61  ADREMVEEKAGDMIDEAIDNDVAFLVVGDPFGATTHSDLVVRAKTLGVKVEVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVGICGLQLY +GETVSIPFFTETWRP SFYEKIK+NRSLGLHTLCLL
Sbjct: 121 AVGICGLQLYHYGETVSIPFFTETWRPDSFYEKIKKNRSLGLHTLCLL 168

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
TAIR|locus:2124859	277	AT4G31790 [Arabidopsis thalian	0.928	0.606	0.833	6.7e-72
ZFIN|ZDB-GENE-041114-85	288	dph5 "DPH5 homolog (S. cerevis	0.900	0.565	0.654	4.6e-57
MGI|MGI:1916990	281	Dph5 "DPH5 homolog (S. cerevis	0.900	0.580	0.648	5.9e-57
UNIPROTKB|Q9H2P9	285	DPH5 "Diphthine synthase" [Hom	0.900	0.571	0.642	1.6e-56
RGD|1307867	281	Dph5 "DPH5 homolog (S. cerevis	0.900	0.580	0.642	1.6e-56
UNIPROTKB|E2RQL8	280	DPH5 "Uncharacterized protein"	0.900	0.582	0.636	2e-56
UNIPROTKB|F1S569	285	DPH5 "Uncharacterized protein"	0.900	0.571	0.636	5.3e-56
UNIPROTKB|F1P418	286	DPH5 "Uncharacterized protein"	0.900	0.569	0.642	1.1e-55
UNIPROTKB|Q5E982	285	DPH5 "Diphthine synthase" [Bos	0.900	0.571	0.630	2.9e-55
DICTYBASE|DDB_G0276115	273	dph5 "diphthamide biosynthesis	0.911	0.604	0.636	4.8e-55

TAIR|locus:2124859 AT4G31790 [Arabidopsis thaliana (taxid:3702)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 140/168 (83%), Positives = 154/168 (91%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLYIIGLGLGDE+DITLRGLEAVKK  KVY+EAYTSLLSFGLS DGLS LEK YGKPI L
Sbjct:     1 MLYIIGLGLGDEKDITLRGLEAVKKSQKVYMEAYTSLLSFGLSADGLSNLEKFYGKPIIL 60

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADREMVEEKA  ++ E+ +++VAFLVVGDPFGATTH+DLVVRAK LG++V+ VHNASVMN
Sbjct:    61 ADREMVEEKAGDMIDEAIDNDVAFLVVGDPFGATTHSDLVVRAKTLGVKVEVVHNASVMN 120

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
             AVGICGLQLY +GETVSIPFFTETWRP SFYEKIK+NRSLGLHTLCLL
Sbjct:   121 AVGICGLQLYHYGETVSIPFFTETWRPDSFYEKIKKNRSLGLHTLCLL 168

GO:0004164 "diphthine synthase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA;ISS

GO:0008168 "methyltransferase activity" evidence=IEA;ISS

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA;ISS

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-041114-85 dph5 "DPH5 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 110/168 (65%), Positives = 138/168 (82%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY++GLGLGD +DIT++GLE ++KC +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct:     1 MLYLVGLGLGDAKDITVKGLEIIRKCSRVYLEAYTSIL-----TVGKDALEEYYGRELLL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADR+MVE++AD+IL  +   +VAFLVVGDPFGATTH+DLV+RA   GIQ + +HNASVMN
Sbjct:    56 ADRDMVEQQADEILKGADVCDVAFLVVGDPFGATTHSDLVLRALNAGIQYRVIHNASVMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
             AVG CGLQLY FGETVSI F+T+TWRP SFY+KIK+NR +GLHTLCLL
Sbjct:   116 AVGCCGLQLYNFGETVSIVFWTDTWRPESFYDKIKKNRDMGLHTLCLL 163

GO:0008152 "metabolic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:1916990 Dph5 "DPH5 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 109/168 (64%), Positives = 139/168 (82%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct:     1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVL-----TVGKEALEEFYGRKLIL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD I  ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNIFKDADVSDVAFLVVGDPFGATTHSDLILRATKLGIPYQVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
             AVG CGLQLYRFGETVSI F+T+TWRP SF++K+KRNR+ G+HTLCLL
Sbjct:   116 AVGCCGLQLYRFGETVSIVFWTDTWRPESFFDKVKRNRANGMHTLCLL 163

GO:0003674 "molecular_function" evidence=ND

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0032259 "methylation" evidence=IEA

UNIPROTKB|Q9H2P9 DPH5 "Diphthine synthase" [Homo sapiens (taxid:9606)]

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 108/168 (64%), Positives = 139/168 (82%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + +
Sbjct:     1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVL-----TVGKEALEEFYGRKLVV 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD IL ++  S+VAFLVVGDPFGATTH+DLV+RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
             AVG CGLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLL
Sbjct:   116 AVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLL 163

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA;NAS

GO:0004164 "diphthine synthase activity" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

RGD|1307867 Dph5 "DPH5 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 108/168 (64%), Positives = 138/168 (82%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct:     1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVL-----TVGKEALEEFYGRKLIL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD I  ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNIFKDADVSDVAFLVVGDPFGATTHSDLILRATKLGIPYQVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
             AVG CGLQLYRFGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLL
Sbjct:   116 AVGCCGLQLYRFGETVSIVFWTDTWRPESFFDKVKKNRENGMHTLCLL 163

GO:0003674 "molecular_function" evidence=ND

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

UNIPROTKB|E2RQL8 DPH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 107/168 (63%), Positives = 139/168 (82%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct:     1 MLYLIGLGLGDAKDITVKGLEIVRRCRRVYLEAYTSIL-----TVGKEVLEEFYGRKLIL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD IL ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLILRATKLGISYRVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
             AVG CGLQLY+FGET+SI F+T+TWRP SF++K+K+NR  G+HTLCLL
Sbjct:   116 AVGCCGLQLYKFGETISIVFWTDTWRPESFFDKVKKNRQNGMHTLCLL 163

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

UNIPROTKB|F1S569 DPH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
 Identities = 107/168 (63%), Positives = 138/168 (82%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct:     1 MLYMIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSIL-----TVGKEVLEEFYGRKLIL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD IL ++   +VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNILKDADIGDVAFLVVGDPFGATTHSDLILRATKLGIPYRVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
             AVG CGLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLL
Sbjct:   116 AVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRLNGMHTLCLL 163

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

UNIPROTKB|F1P418 DPH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 108/168 (64%), Positives = 137/168 (81%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY++GLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YGK + L
Sbjct:     2 MLYLVGLGLGDAKDITVKGLEVVRRCRRVYLEAYTSVL-----TVGKEALEEFYGKELIL 56

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD IL ++   +VAFLVVGDPFGATTH+DLV+RA +LGI  + +HNAS+MN
Sbjct:    57 ADRETVEQEADSILKDADVCDVAFLVVGDPFGATTHSDLVLRAVQLGIPYQVIHNASIMN 116

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
             AVG CGLQLY FGETVSI F+T+TW+P SF++KIKRNR  G+HTLCLL
Sbjct:   117 AVGCCGLQLYNFGETVSIVFWTDTWKPESFFDKIKRNRQNGMHTLCLL 164

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

UNIPROTKB|Q5E982 DPH5 "Diphthine synthase" [Bos taurus (taxid:9913)]

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 106/168 (63%), Positives = 137/168 (81%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+E YTS+L     T G   LE+ Y + + L
Sbjct:     1 MLYMIGLGLGDAKDITVKGLEVVRRCSRVYLETYTSVL-----TVGKEVLEEFYERKLIL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD IL ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLILRATKLGIPYRVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
             AVG CGLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLL
Sbjct:   116 AVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLL 163

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

DICTYBASE|DDB_G0276115 dph5 "diphthamide biosynthesis protein 5" [Dictyostelium discoideum (taxid:44689)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 107/168 (63%), Positives = 138/168 (82%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             +LYIIGLGLGDE+D+T++G EA+KK  K+Y+EAYTSLL  G ST  +  LEK Y K I +
Sbjct:     2 VLYIIGLGLGDEKDVTIKGFEAIKKSSKIYLEAYTSLL--GGSTS-IEALEKFYEKKIII 58

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADREMVE   +++L ES E++V+FLVVGDPFGATTHTDLV+RAK+L I VK +HNAS+MN
Sbjct:    59 ADREMVESGCEEMLKESTENDVSFLVVGDPFGATTHTDLVIRAKELSIPVKVIHNASIMN 118

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
             A+G CGLQLY +G+T+S+ FFTET +P S+Y+++K NR  G+HTLCLL
Sbjct:   119 AIGCCGLQLYSYGQTISMVFFTETTKPDSWYDRVKINRVNGMHTLCLL 166

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA;ISS

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0032259 "methylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q75JG8	DPH5_DICDI	2, ., 1, ., 1, ., 9, 8	0.6369	0.9116	0.6043	yes	no
O81769	DPH5_ARATH	2, ., 1, ., 1, ., 9, 8	0.8333	0.9281	0.6064	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.1	0.766
4th Layer	2.1.1.98	0.824

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00014439001	RecName- Full=Diphthine synthase; EC=2.1.1.98;; Required for the methylation step in diphthamide biosynthesis (By similarity) (285 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00023426001	SubName- Full=Chromosome undetermined scaffold_30, whole genome shotgun sequence; (426 aa)			•	•		•	•		0.871
	GSVIVG00025739001	SubName- Full=Chromosome chr19 scaffold_35, whole genome shotgun sequence; (508 aa)				•	•		•		0.798
	GSVIVG00021307001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (586 aa)				•					0.736
	GSVIVG00037695001	SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (245 aa)			•	•					0.734
	GSVIVG00032161001	RecName- Full=Serine hydroxymethyltransferase; EC=2.1.2.1;; Interconversion of serine and glyci [...] (428 aa)							•		0.731
	GSVIVG00017697001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (86 aa)				•	•				0.728
	GSVIVG00028481001	SubName- Full=Chromosome chr7 scaffold_44, whole genome shotgun sequence; (316 aa)				•					0.712
	GSVIVG00017910001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (481 aa)			•	•					0.710
	GSVIVG00021672001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (315 aa)				•					0.704
	GSVIVG00022683001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (181 aa)				•			•		0.680

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	181
PTZ00175	270	PTZ00175, PTZ00175, diphthine synthase; Provisiona	1e-104
cd11647	241	cd11647, Diphthine_synthase, Diphthine synthase, a	1e-102
COG1798	260	COG1798, DPH5, Diphthamide biosynthesis methyltran	3e-80
PRK04160	258	PRK04160, PRK04160, diphthine synthase; Provisiona	1e-73
TIGR00522	257	TIGR00522, dph5, diphthine synthase	3e-72
cd09815	224	cd09815, TP_methylase, S-AdoMet dependent tetrapyr	2e-18
pfam00590	202	pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porp	1e-14
COG2243	234	COG2243, CobF, Precorrin-2 methylase [Coenzyme met	4e-10
PRK05576	229	PRK05576, PRK05576, cobalt-precorrin-2 C(20)-methy	9e-10
TIGR01467	230	TIGR01467, cobI_cbiL, precorrin-2 C20-methyltransf	4e-08
COG0313	275	COG0313, COG0313, Predicted methyltransferases [Ge	3e-06
cd11645	226	cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methy	1e-05
COG1010	249	COG1010, CobJ, Precorrin-3B methylase [Coenzyme me	1e-05
cd11644	201	cd11644, Precorrin-6Y-methylase, Precorrin-6Y meth	2e-05
cd11724	255	cd11724, TP_methylase_like, Uncharacterized subfam	3e-05
COG3956	488	COG3956, COG3956, Protein containing tetrapyrrole	3e-05
cd11723	220	cd11723, YabN_N, N-terminal S-AdoMet dependent met	5e-05
PRK05787	210	PRK05787, PRK05787, cobalt-precorrin-6Y C(5)-methy	8e-05
COG2241	210	COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme	2e-04
TIGR01466	239	TIGR01466, cobJ_cbiH, precorrin-3B C17-methyltrans	0.001
cd11646	240	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-m	0.004

>gnl|CDD|185500 PTZ00175, PTZ00175, diphthine synthase; Provisional

 Score =  301 bits (772), Expect = e-104
 Identities = 118/168 (70%), Positives = 139/168 (82%), Gaps = 4/168 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DIT++GLEAVK  D VY+E+YTS+L    + +    LE+ YGKP+  
Sbjct: 2   MLYIIGLGLGDEKDITVKGLEAVKSADVVYLESYTSIL-INSNKE---KLEEFYGKPVIE 57

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEE  D+IL E++E NVAFLVVGDPF ATTHTDL +RAKK GI+V+ +HNAS+MN
Sbjct: 58  ADREMVEEGCDEILEEAKEKNVAFLVVGDPFCATTHTDLYLRAKKKGIEVEVIHNASIMN 117

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           A+G  GLQLYRFGETVSIPFFTETW+P SFY+KIK NR  GLHTLCLL
Sbjct: 118 AIGCTGLQLYRFGETVSIPFFTETWKPDSFYDKIKANRDNGLHTLCLL 165

Length = 270

>gnl|CDD|212506 cd11647, Diphthine_synthase, Diphthine synthase, also known as DPH5

 Score =  294 bits (754), Expect = e-102
 Identities = 112/169 (66%), Positives = 138/169 (81%), Gaps = 5/169 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY++GLGLGDE+DITL+GLEAVKK DKVY+EAYTS+L  G     L  LE+ YGK I +
Sbjct: 1   MLYLVGLGLGDEKDITLKGLEAVKKADKVYLEAYTSILMGGT----LEALEEFYGKEIIV 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE VEE++D+IL E++E +VA LVVGDPF ATTH+DL +RAK+ GI+V+ +HNAS++N
Sbjct: 57  ADREDVEEESDEILEEAKEKDVALLVVGDPFIATTHSDLRLRAKERGIEVRVIHNASILN 116

Query: 121 AVGIC-GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AVG C GLQLY+FG+TV+IPF TE WRP S Y+ IK N S GLHTLCLL
Sbjct: 117 AVGSCSGLQLYKFGKTVTIPFPTEGWRPDSPYDVIKENLSRGLHTLCLL 165

Diphthine synthase, also known as diphthamide biosynthesis S-adenosylmethionine-dependent methyltransferase, participates in the posttranslational modification of a specific histidine residue in elongation factor 2 (EF-2) of eukaryotes and archaea to diphthamide. It catalyzes the trimethylation step in diphthamide biosynthesis. Diphthamide is the target of diphtheria toxin, which ADP-ribosylates diphthamide and inhibits protein synthesis, leading to host cell death. Length = 241

>gnl|CDD|224711 COG1798, DPH5, Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis]

 Score =  238 bits (610), Expect = 3e-80
 Identities = 89/169 (52%), Positives = 118/169 (69%), Gaps = 5/169 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY++GLGL DE DITL+GLEAV+K D+VY E YTS+L        L  LE+L GK + L
Sbjct: 1   MLYLVGLGLYDEGDITLKGLEAVRKADRVYAEFYTSILLGSN----LEKLEELIGKEVIL 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            DRE +EE +  IL  +++ +VA LV GDP  ATTH DL + AK+ GI+V+ +H AS++N
Sbjct: 57  LDREDLEENSRSILDRAKDKDVALLVAGDPMVATTHVDLRIEAKRRGIEVRVIHGASIIN 116

Query: 121 AV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           A  G+ GLQ Y+FG+TV++PF +E + P S Y+ IK N   GLHTL LL
Sbjct: 117 AAIGLTGLQNYKFGKTVTLPFPSENFFPTSPYDVIKENLERGLHTLVLL 165

Length = 260

>gnl|CDD|235231 PRK04160, PRK04160, diphthine synthase; Provisional

 Score =  221 bits (566), Expect = 1e-73
 Identities = 89/170 (52%), Positives = 117/170 (68%), Gaps = 6/170 (3%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY IGLGL DERDITL+GLEA++  DKVY E YTS+L     T  +  LE+L GK I +
Sbjct: 1   MLYFIGLGLYDERDITLKGLEALRNADKVYAEFYTSILM---GTT-IEKLEELIGKEIIV 56

Query: 61  ADREMVEEKADKIL-SESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
            DRE VE++++KI+  E++E NVAFL  GDP  ATTH DL + AKK GI+V+ +H  S+ 
Sbjct: 57  LDREDVEQESEKIILEEAKEKNVAFLTAGDPMVATTHVDLRLEAKKRGIEVRVIHGVSIY 116

Query: 120 NAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +A   + GLQ Y+FG++V++PF    + P S Y+ IK N   GLHTL LL
Sbjct: 117 SAAISLTGLQNYKFGKSVTVPFPYGNFFPESPYDVIKDNLERGLHTLVLL 166

Length = 258

>gnl|CDD|233007 TIGR00522, dph5, diphthine synthase

 Score =  218 bits (556), Expect = 3e-72
 Identities = 83/169 (49%), Positives = 118/169 (69%), Gaps = 5/169 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGL DE DI+++GLEA+KK D+VY E YTS L        +  +E+ +GK + +
Sbjct: 1   MLYLIGLGLYDENDISVKGLEAIKKADEVYAEFYTSKLL----GSSIEEIEEFFGKRVVV 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            +R  VEE + +++  ++  +VA LV GDP  ATTHTDL + AK+ GI+ + +H AS+ +
Sbjct: 57  LERSDVEENSFRLIERAKSKDVALLVAGDPMVATTHTDLKLEAKRKGIETRIIHGASISS 116

Query: 121 AV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AV G+ GLQLY+FG+T +I FFT+ +RP + Y  IK NR +GLHTL LL
Sbjct: 117 AVCGLTGLQLYKFGKTATIVFFTDNYRPQTPYNVIKENRKIGLHTLVLL 165

Alternate name: diphthamide biosynthesis S-adenosylmethionine-dependent methyltransferase. This protein participates in the modification of a specific His of elongation factor 2 of eukarotes and Archaea to diphthamide. The protein was characterized in Saccharomyces cerevisiae and designated DPH5 [Protein fate, Protein modification and repair]. Length = 257

>gnl|CDD|212499 cd09815, TP_methylase, S-AdoMet dependent tetrapyrrole methylases

 Score = 79.0 bits (195), Expect = 2e-18
 Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 2/125 (1%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           LY +G G GD   +TLR +E ++  D V ++   S L        L    ++        
Sbjct: 1   LYFVGAGPGDPDLLTLRAVEVLRSADVVVVDDKVSELLRLKPRAHLPDGAEIVELVDEEE 60

Query: 62  DREMVEEKADKILSE--SQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
           D   V  +  + L E   Q  +V  LV GDP  A    +L   A+  G+ V+ V   S  
Sbjct: 61  DDHGVLAEVARTLLEAARQGRDVVRLVAGDPLLAGPGAELRAVAEDAGVDVEVVPGVSSA 120

Query: 120 NAVGI 124
            AV  
Sbjct: 121 TAVPA 125

This family uses S-AdoMet (S-adenosyl-L-methionine or SAM) in the methylation of diverse substrates. Most members catalyze various methylation steps in cobalamin (vitamin B12) biosynthesis. There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. The enzymes involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Most of the enzymes are shared by both pathways and a few enzymes are pathway-specific. Diphthine synthase and Ribosomal RNA small subunit methyltransferase I (RsmI) are two superfamily members that are not involved in cobalamin biosynthesis. Diphthine synthase participates in the posttranslational modification of a specific histidine residue in elongation factor 2 (EF-2) of eukaryotes and archaea to diphthamide. RsmI catalyzes the 2-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA using S-adenosylmethionine (Ado-Met) as the methyl donor. Length = 224

>gnl|CDD|216012 pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porphyrin) Methylases

 Score = 68.5 bits (168), Expect = 1e-14
 Identities = 45/174 (25%), Positives = 64/174 (36%), Gaps = 17/174 (9%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIE--AYTSLLSFGLSTDGLSTLEKLYGKPI 58
            LYI+G+G GD   +TLR L A+K+ D V  +  A   LL                 + +
Sbjct: 1   KLYIVGIGPGDPELLTLRALRALKEADVVIGDDRALEILLDLLRPMGK-------ELELL 53

Query: 59  ALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASV 118
             A  E+ E      L  + + +V  LV GDP    T + LV   +  GI+V+ +   S 
Sbjct: 54  EGAYEEIAELLEAAALLRAGK-DVVVLVSGDPLVYGTGSYLVEALEAAGIEVEVIPGISS 112

Query: 119 MNAVGIC-GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLGGV 171
           + A     G+ L   G            R             L   TL LL   
Sbjct: 113 LQAAAARLGIPLTDGGVVSLHG------RGLETLRARLLEALLAGDTLVLLTDP 160

This family uses S-AdoMet in the methylation of diverse substrates. This family includes a related group of bacterial proteins of unknown function. This family includes the methylase Dipthine synthase. Length = 202

>gnl|CDD|225152 COG2243, CobF, Precorrin-2 methylase [Coenzyme metabolism]

 Score = 56.5 bits (137), Expect = 4e-10
 Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSL--LSFGLSTDGLS--TLEKLYGK 56
            LY +GLG GD   +TL+ + A+KK D VY+ +      L+  +  D L+  +       
Sbjct: 3   KLYGVGLGPGDPELLTLKAIRALKKADVVYVPSKKGKGSLAREIVEDYLTPGSRIVELHF 62

Query: 57  PIALADREMV----EEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVK 111
           P+    RE +    EE A ++ +E +   +VAFL +GDP   +T   L+ R ++ G +V+
Sbjct: 63  PMTTDMREELEDAWEEAAAEVAAELEAGRDVAFLTLGDPTFYSTFMYLLERLRERGFEVE 122

Query: 112 AV 113
            V
Sbjct: 123 VV 124

Length = 234

>gnl|CDD|235512 PRK05576, PRK05576, cobalt-precorrin-2 C(20)-methyltransferase; Validated

 Score = 55.3 bits (134), Expect = 9e-10
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 21/128 (16%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLS-TLEKLYGKPIA 59
            LY IGLG GD   +T++    +++ D VY  A             L+  + + Y K   
Sbjct: 3   KLYGIGLGPGDPELLTVKAARILEEADVVYAPASRK------GGGSLALNIVRPYLKEET 56

Query: 60  ---------LADREMVEEK----ADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKK 105
                      D E  E      A++I +E++E  NVAF+ +GDP   +T + L+   K 
Sbjct: 57  EIVELHFPMSKDEEEKEAVWKENAEEIAAEAEEGKNVAFITLGDPNLYSTFSHLLEYLKC 116

Query: 106 LGIQVKAV 113
             I+V+ V
Sbjct: 117 HDIEVETV 124

Length = 229

>gnl|CDD|233425 TIGR01467, cobI_cbiL, precorrin-2 C20-methyltransferase

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 20/137 (14%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
            LY +G+G GD   IT++ LEA++  D + + A       G  +     +E  Y KP   
Sbjct: 2   KLYGVGVGPGDPELITVKALEALRSADVIAVPASKK----GRESLARKIVED-YLKPNDT 56

Query: 61  ADREMV--------------EEKADKILSESQES-NVAFLVVGDPFGATTHTDLVVRAKK 105
              E+V              +E A+ + +E +E  +VAFL +GDP   +T + L+ R + 
Sbjct: 57  RILELVFPMTKDRDELEKAWDEAAEAVAAELEEGRDVAFLTLGDPSLYSTFSYLLQRLQG 116

Query: 106 LGIQVKAVHNASVMNAV 122
           +GI+V+ V   +   A 
Sbjct: 117 MGIEVEVVPGITSFAAC 133

This model represents precorrin-2 C20-methyltransferase, one of several closely related S-adenosylmethionine-dependent methyltransferases involved in cobalamin (vitamin B12) biosynthesis [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 230

>gnl|CDD|223390 COG0313, COG0313, Predicted methyltransferases [General function prediction only]

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 27/143 (18%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG---KP 57
            LY++   +G+  DITLR LE +K+ D +  E           T     L    G     
Sbjct: 6   TLYLVPTPIGNLADITLRALEVLKEVDVIAAE----------DTRVTRKLLSHLGIKTPL 55

Query: 58  IALADREMVEEKADKILSE-SQESNVAFL------VVGDPFGATTHTDLVVRAKKLGIQV 110
           I+  +    +EK  K++    +  +VA +      ++ DP G     +LV  A++ GI+V
Sbjct: 56  ISYHEHNE-KEKLPKLIPLLKKGKSVALVSDAGTPLISDP-GY----ELVRAAREAGIRV 109

Query: 111 KAVHNAS-VMNAVGICGLQLYRF 132
             +   S ++ A+   GL   RF
Sbjct: 110 VPLPGPSALITALSASGLPSQRF 132

Length = 275

>gnl|CDD|212504 cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methyltransferase, also named CobI or CbiL

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 11/123 (8%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
            LY +G+G GD   +TL+ +  +++ D + +   +       +   +        + + L
Sbjct: 1   KLYGVGVGPGDPELLTLKAVRILREADVIAV-PGSKAGEGSAALIIVVAYLIPEKEILPL 59

Query: 61  -----ADREMVE----EKADKILSE-SQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQV 110
                 D+E++E    E A +I +E     +VAFL +GDP   +T + L+ R ++ G++V
Sbjct: 60  EFPMTKDKEVLEEAWDEAAAEIAAELEAGKDVAFLTLGDPSLYSTFSYLLRRLREPGVEV 119

Query: 111 KAV 113
           + +
Sbjct: 120 ETI 122

Precorrin-2 C20-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. Precorrin-2 C20-methyltransferase catalyzes methylation at the C-20 position of a cyclic tetrapyrrole ring of precorrin-2 using S-adenosylmethionine as a methyl group source to produce precorrin-3A. In the anaerobic pathway, cobalt is inserted into precorrin-2 by CbiK to generate cobalt-precorrin-2, which is the substrate for CbiL, a C20 methyltransferase. In Clostridium difficile, CbiK and CbiL are fused into a bifunctional enzyme. In the aerobic pathway, the precorrin-2 C20-methyltransferase is named CobI. This family includes CbiL and CobI precorrin-2 C20-methyltransferases, both as stand-alone enzymes and when CbiL forms part of a bifunctional enzyme. Length = 226

>gnl|CDD|223942 COG1010, CobJ, Precorrin-3B methylase [Coenzyme metabolism]

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 19/128 (14%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
            LY++G+G GD   +T     A+++ D   I  YT+ L           +E   GK +  
Sbjct: 4   KLYVVGIGPGDPELMTPEARRALEEAD--VIVGYTTYLDL---------IELRPGKEVIR 52

Query: 61  AD--REMVEEKADKILSESQES-NVAFLVVGDP--FG-ATTHTDLVVRAKKLGIQVKAVH 114
           +    E+  E+A + +  + E  +VA +  GDP  +G A    +         + V+ V 
Sbjct: 53  SGMREEI--ERAKEAIELAAEGRDVALVSSGDPGVYGMAGLVLEAAEEEGWYDVDVEVVP 110

Query: 115 NASVMNAV 122
             +   A 
Sbjct: 111 GVTAALAA 118

Length = 249

>gnl|CDD|212503 cd11644, Precorrin-6Y-methylase, Precorrin-6Y methyltransferase, the cobalamin biosynthesis enzyme CbiE

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 22/94 (23%)

Query: 2  LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDG----LSTLEKLYGKP 57
          + ++G+G G    +T    EA+++ D +                G    L     L  + 
Sbjct: 1  ITVVGIGPGGPDGLTPAAREAIEEADVLV---------------GGKRHLELFPDLGAEK 45

Query: 58 IALADREMVEEKADKILSESQESNVAFLVVGDPF 91
          I L   ++  E  +++   +    V  L  GDP 
Sbjct: 46 IPLPSDDL-AELLERL--AAAGRRVVVLASGDPL 76

Precorrin-6Y methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not requires oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model represents the CbiE subunit of precorrin-6Y C5,15-methyltransferase from the anaerobic pathway, a bifunctional enzyme that catalyzes two methylations (at C-5 and C-15) in precorrin-6Y, as well as the decarboxylation of the acetate side chain located in ring C, in order to generate precorrin-8X. In the anaerobic pathway, two enzymes are required to produce precorrin-8X: CbiE and CbiT, which can be fused as CbiET (sometimes called CobL). In the aerobic pathway, the bifunctional enzyme is called CobL. Length = 201

>gnl|CDD|212510 cd11724, TP_methylase_like, Uncharacterized subfamily of S-AdoMet dependent tetrapyrrole methylases

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 22/115 (19%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVY-----IEAYTSLLSFG-LSTDGLSTLEKLYG 55
           LY++G+G GD  +ITLR LE + K D ++     ++ +   L    +  D         G
Sbjct: 3   LYLVGVGPGDPDNITLRALEVIAKADIIFCPKEIVKRFADYLKGKPVLEDPWKLFWHYGG 62

Query: 56  KPI-----ALADREMVEEKADKILSE---------SQESNVAFLVVGDP--FGAT 94
           KP        + RE  EE+  +   E         +Q  NVA L  GDP  +G +
Sbjct: 63  KPWENLEAEKSPREAFEEEKKRQREEFVKVIREALAQGKNVALLDGGDPTIYGPS 117

TP-methylases use S-AdoMet (S-adenosyl-L-methionine or SAM) in the methylation of diverse substrates. Most members catalyze various methylation steps in cobalamin (vitamin B12) biosynthesis, other members like Diphthine synthase and Ribosomal RNA small subunit methyltransferase I (RsmI) act on other substrates. The function of this subfamily is not known. Length = 255

>gnl|CDD|226465 COG3956, COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only]

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 26/125 (20%), Positives = 55/125 (44%), Gaps = 5/125 (4%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEA--YTSLLSFGLSTDGLSTLEKLYGKPI 58
            + ++GLG GD+  +TL   + +K  D +Y+    +  +          S  + +Y    
Sbjct: 4   TITVVGLGAGDKDQLTLGIYKLLKNQDNLYVRTKDHPVIEELDEEGIKFSFFDDIYETHE 63

Query: 59  ALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAK-KLGIQVKAVHNAS 117
                 + +  A  ++  ++E ++ + V G P  A     L++ A  K  I+VK +   S
Sbjct: 64  QF--EAVYDFIAADLVEAAKEKDIVYAVPGHPLVAEKTVQLLIEACEKENIKVKILGGQS 121

Query: 118 VMNAV 122
            ++A+
Sbjct: 122 FIDAL 126

Length = 488

>gnl|CDD|212509 cd11723, YabN_N, N-terminal S-AdoMet dependent methylase domain of Bacillus subtilis YabN and related proteins

 Score = 41.8 bits (99), Expect = 5e-05
 Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 22/144 (15%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIE-----AYTSLLSFGLSTDGLSTLEKLYG 55
            + I+GLG GD   +TL    A+K  DK+++          L   G+S     + + +Y 
Sbjct: 1   KITIVGLGPGDPDQLTLGVYRALKAADKIFLRTAIHPVVAELEEEGIS---FESFDSVYE 57

Query: 56  KPIALADR--EMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVV-RAKKLGIQVKA 112
           +     +   E+  E A+++L E+++ +V + V G P  A     L++ +A+K G++V+ 
Sbjct: 58  E----HETFEEVYREIAEELLEEAKKGDVVYAVPGHPLVAEKTVQLLLEKAEKAGVEVEI 113

Query: 113 VHNAS----VMNAVGI---CGLQL 129
           +   S    +  A+GI    GLQL
Sbjct: 114 LGGQSFLDALFTALGIDPIEGLQL 137

This family contains proteins similar to Bacillus subtilis YabN, which is a fusion of an N-terminal TP-methylase and a C-terminal MazG-type nucleotide pyrophosphohydrolase domain. MazG-like NTP-PPases have been implicated in house-cleaning functions such as degrading abnormal (d)NTPs. TP-methylases use S-AdoMet (S-adenosyl-L-methionine or SAM) in the methylation of diverse substrates. Most members catalyze various methylation steps in cobalamin (vitamin B12) biosynthesis, other members like Diphthine synthase and Ribosomal RNA small subunit methyltransferase I (RsmI) act on other substrates. The specific function of YabN's TP-methylase domain is not known. Length = 220

>gnl|CDD|235609 PRK05787, PRK05787, cobalt-precorrin-6Y C(5)-methyltransferase; Validated

 Score = 41.4 bits (98), Expect = 8e-05
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 22/95 (23%)

Query: 1  MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLST-LEKLYGKPIA 59
          M+YI+G+G GD   +TL+ LEA++K D V                G    LE      + 
Sbjct: 1  MIYIVGIGPGDPEYLTLKALEAIRKADVVV---------------GSKRVLELF--PELI 43

Query: 60 LADREMV----EEKADKILSESQESNVAFLVVGDP 90
            +  ++     +  + +   ++  NV  L  GDP
Sbjct: 44 DGEAFVLTAGLRDLLEWLELAAKGKNVVVLSTGDP 78

Length = 210

>gnl|CDD|225150 COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme metabolism]

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 11/91 (12%)

Query: 1  MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
          M+ ++G+G G    +TL  +EA+++ D V        L           +   Y      
Sbjct: 1  MITVVGIGPGGPEGLTLAAIEAIRRADVVA--GSKRHLELLPPLIKAERIIWPYPF---- 54

Query: 61 ADREMVEEKADKILSESQESNVAFLVVGDPF 91
           D E +EE    IL+E +  +V  L  GDP 
Sbjct: 55 -DAESLEE----ILAERKGRDVVVLASGDPL 80

Length = 210

>gnl|CDD|233424 TIGR01466, cobJ_cbiH, precorrin-3B C17-methyltransferase

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 17/127 (13%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           LY++G+G G E  +T    EA+ + D   I  Y + L        +  L  + GK +  +
Sbjct: 1   LYVVGIGPGAEELMTPEAKEALAEAD--VIVGYKTYLDL------IEDL--IPGKEVVTS 50

Query: 62  DREMVEE--KADKILSESQESN-VAFLVVGDP--FGATTHTDLVVRAKKLGIQVKAVHNA 116
              M EE  +A+  +  + E   VA +  GDP  +G        +  K   + ++ +   
Sbjct: 51  G--MREEIARAELAIELAAEGRTVALVSSGDPGIYGMAALVFEALEKKGAEVDIEVIPGI 108

Query: 117 SVMNAVG 123
           +  +A  
Sbjct: 109 TAASAAA 115

This model represents precorrin-3B C17-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-4 C11-methyltransferase, EC 2.1.1.133). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products. Members of this family may appear as fusion proteins with other enzymes of cobalamin biosynthesis [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 239

>gnl|CDD|212505 cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (CobJ/CbiH)

 Score = 36.3 bits (85), Expect = 0.004
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 5/36 (13%)

Query: 2  LYIIGLGLGDERDITLRGLEAVKKCD-----KVYIE 32
          LY++G+G GD   +T R  EA+++ D     K Y++
Sbjct: 3  LYVVGIGPGDPDLMTPRAREAIEEADVVVGYKTYLD 38

Precorrin-3B C(17)-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model includes CobJ of the aerobic pathway and CbiH of the anaerobic pathway, both as stand-alone enzymes and when CobJ forms part of a bifunctional enzyme. In the aerobic pathway, once CobG has generated precorrin-3b, CobJ catalyzes the methylation of precorrin-3b at C-17 to form precorrin-4 (the extruded methylated C-20 fragment is left attached as an acyl group at C-1). In the corresponding anaerobic pathway, CbiH carries out this ring contraction, using cobalt-precorrin-3b as a substrate to generate a tetramethylated delta-lactone. Length = 240

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	181
PTZ00175	270	diphthine synthase; Provisional	100.0
TIGR00522	257	dph5 diphthine synthase. This protein participates	100.0
COG1798	260	DPH5 Diphthamide biosynthesis methyltransferase [T	100.0
PRK04160	258	diphthine synthase; Provisional	100.0
COG2243	234	CobF Precorrin-2 methylase [Coenzyme metabolism]	99.98
PRK06136	249	uroporphyrin-III C-methyltransferase; Reviewed	99.97
KOG3123	272	consensus Diphthine synthase [Translation, ribosom	99.97
TIGR01469	236	cobA_cysG_Cterm uroporphyrin-III C-methyltransfera	99.97
PRK05948	238	precorrin-2 methyltransferase; Provisional	99.97
TIGR01465	229	cobM_cbiF precorrin-4 C11-methyltransferase. This	99.97
PF00590	210	TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Meth	99.97
COG0007	244	CysG Uroporphyrinogen-III methylase [Coenzyme meta	99.97
PRK05990	241	precorrin-2 C(20)-methyltransferase; Reviewed	99.97
PLN02625	263	uroporphyrin-III C-methyltransferase	99.96
PRK15473	257	cbiF cobalt-precorrin-4 C(11)-methyltransferase; P	99.96
PRK05576	229	cobalt-precorrin-2 C(20)-methyltransferase; Valida	99.96
PRK05787	210	cobalt-precorrin-6Y C(5)-methyltransferase; Valida	99.96
TIGR01467	230	cobI_cbiL precorrin-2 C20-methyltransferase. This	99.96
COG2875	254	CobM Precorrin-4 methylase [Coenzyme metabolism]	99.96
COG2241	210	CobL Precorrin-6B methylase 1 [Coenzyme metabolism	99.96
PRK08284	253	precorrin 6A synthase; Provisional	99.96
PRK10637	457	cysG siroheme synthase; Provisional	99.96
PRK07168	474	bifunctional uroporphyrinogen-III methyltransferas	99.96
TIGR02434	249	CobF precorrin-6A synthase (deacetylating). This m	99.95
TIGR01466	239	cobJ_cbiH precorrin-3B C17-methyltransferase. This	99.95
PRK05765	246	precorrin-3B C17-methyltransferase; Provisional	99.95
PRK15478	241	cbiH cobalt-precorrin-3B C(17)-methyltransferase;	99.95
PRK05991	250	precorrin-3B C17-methyltransferase; Provisional	99.95
TIGR02467	204	CbiE precorrin-6y C5,15-methyltransferase (decarbo	99.94
PRK14994	287	SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-	99.94
COG1010	249	CobJ Precorrin-3B methylase [Coenzyme metabolism]	99.94
KOG1527	506	consensus Uroporphyrin III methyltransferase [Coen	99.88
COG0313	275	Predicted methyltransferases [General function pre	99.77
TIGR00096	276	probable S-adenosylmethionine-dependent methyltran	99.74
COG3956	488	Protein containing tetrapyrrole methyltransferase	99.38

>PTZ00175 diphthine synthase; Provisional

Probab=100.00  E-value=7.5e-39  Score=263.37  Aligned_cols=168  Identities=70%  Similarity=1.109  Sum_probs=145.3

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHHHHccCC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   80 (181)
                      |||+||+|||||++||+||+++|++||+|+++.+++.+.. ...+   .+..+++++....++..+++.++.+++.++++
T Consensus         2 mlylVG~GpGdp~lLTlkal~~L~~ADvV~~d~~ts~l~~-~~~~---~l~~~~gk~~~~~~r~~~e~~~~~ii~~a~~~   77 (270)
T PTZ00175          2 MLYIIGLGLGDEKDITVKGLEAVKSADVVYLESYTSILIN-SNKE---KLEEFYGKPVIEADREMVEEGCDEILEEAKEK   77 (270)
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEecccchhcc-CCHH---HHHHhcCCeeEecCccCHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999999999998775431 1223   44444555543334445665666777777778


Q ss_pred             CEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHHHHcCCCcccCCceeEEecccCCCCCCChHHHHHHHhcC
Q 030179           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSL  160 (181)
Q Consensus        81 ~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~  160 (181)
                      +|++|++|||++|+++.+++.++++.|+++++|||+|+++|++.+|+++++|+.++++++++.|++|.++++.+++|+.+
T Consensus        78 ~Vv~L~~GDP~i~~t~~~l~~~~~~~gi~vevIPGvSi~sA~~~~Gl~~~~fg~~~sv~~~t~~~~~~s~~~~i~~n~~~  157 (270)
T PTZ00175         78 NVAFLVVGDPFCATTHTDLYLRAKKKGIEVEVIHNASIMNAIGCTGLQLYRFGETVSIPFFTETWKPDSFYDKIKANRDN  157 (270)
T ss_pred             CEEEEECCCCCccCCHHHHHHHHHHCCCcEEEECCcCHHHHHhhcCCCcCCCCceEEEEEEeCCCCCCChhHHHHHHHHc
Confidence            99999999999999999999999999999999999999998888999999999999999999999999999999999999


Q ss_pred             CCceEEEEccee
Q 030179          161 GLHTLCLLGGVT  172 (181)
Q Consensus       161 ~~~tlvlld~~~  172 (181)
                      ++|||||||++.
T Consensus       158 glhTl~lldi~~  169 (270)
T PTZ00175        158 GLHTLCLLDIKV  169 (270)
T ss_pred             CCceEEEEeeec
Confidence            999999999994

>TIGR00522 dph5 diphthine synthase

Probab=100.00  E-value=2.5e-36  Score=247.31  Aligned_cols=168  Identities=49%  Similarity=0.817  Sum_probs=142.9

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHHHHccCC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   80 (181)
                      |||+||+|||||++||+||+++|++||+|+++.+++.+.. .   .++.+..+.++......+..+++.++.+.+.++++
T Consensus         1 ~l~~VG~GPGd~~llTl~a~~~L~~advV~~~~~~s~l~~-~---~~~~~~~~~~~~~~~~~~~~~e~~~~~ii~~~~~~   76 (257)
T TIGR00522         1 MLYLIGLGLYDENDISVKGLEAIKKADEVYAEFYTSKLLG-S---SIEEIEEFFGKRVVVLERSDVEENSFRLIERAKSK   76 (257)
T ss_pred             CEEEEECCCCChhhhCHHHHHHHHcCCEEEEeccchhhcc-c---cHHHHHHHhCCcccccCHHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999999999999999977654321 1   12355555555443333455666677777777668


Q ss_pred             CEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHhc
Q 030179           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (181)
Q Consensus        81 ~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~  159 (181)
                      +|+++++|||++|+++.++.+++++.|++++++|||||++++ |++|+|+++++.+.++.+.++|++|.++++.+++|+.
T Consensus        77 ~Vv~l~~GDP~i~~~~~~l~~~l~~~~i~vevIPGiSs~~aaaa~~g~~lt~~g~~~~v~~~s~~~~~~~~~~~~~~~l~  156 (257)
T TIGR00522        77 DVALLVAGDPMVATTHTDLKLEAKRKGIETRIIHGASISSAVCGLTGLQLYKFGKTATIVFFTDNYRPQTPYNVIKENRK  156 (257)
T ss_pred             CEEEEECCcCcccCCHHHHHHHHHHCCCeEEEECcHhHHHHHHHHcCCCcccCCCcEEEEEecCCcCCCCHHHHHHHHHh
Confidence            999999999999999999999999999999999999999976 8999999999999999999999998888889999999


Q ss_pred             CCCceEEEEccee
Q 030179          160 LGLHTLCLLGGVT  172 (181)
Q Consensus       160 ~~~~tlvlld~~~  172 (181)
                      .+.||+||||.+.
T Consensus       157 ~~~~Tlvll~~~~  169 (257)
T TIGR00522       157 IGLHTLVLLDIHP  169 (257)
T ss_pred             cCCCcEEEEeccc
Confidence            9999999998885

This protein participates in the modification of a specific His of elongation factor 2 of eukarotes and Archaea to diphthamide. The protein was characterized in Saccharomyces cerevisiae and designated DPH5.

>COG1798 DPH5 Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=8.3e-36  Score=237.74  Aligned_cols=169  Identities=53%  Similarity=0.806  Sum_probs=155.5

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHHHHccCC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   80 (181)
                      |+|+||+|+.|...+|+++++++++||.||++.|||.+.. ..   ++.+++++++++...+|...|+..+.|++.++++
T Consensus         1 mL~lVGlGL~d~~diTl~gleavr~~d~Vy~E~YTS~~~~-~~---~e~le~~~gkev~~~~R~dlE~~~~~il~~a~~~   76 (260)
T COG1798           1 MLYLVGLGLYDEGDITLKGLEAVRKADRVYAEFYTSILLG-SN---LEKLEELIGKEVILLDREDLEENSRSILDRAKDK   76 (260)
T ss_pred             CeEEEEeccCccCceeHHHHHHHHhCCEEEEEeeeccccc-ch---HHHHHHHhCCceEeccHHHHhhcchhHHHHHhcC
Confidence            8999999999999999999999999999999999986532 12   3477777888888878888887777888888888


Q ss_pred             CEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHhc
Q 030179           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (181)
Q Consensus        81 ~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~  159 (181)
                      +|++|+.|||++.++|..|+-+++++|+++++|||+|.++|+ ++.|+..++||.++++++++.++.|.++|+.|++|.+
T Consensus        77 ~Vall~~GDpmvATTH~~L~~~A~~~Gi~v~vIh~~Si~~Aa~g~tGL~~YkFG~~vTip~~~~~~~p~s~yd~Ik~N~~  156 (260)
T COG1798          77 DVALLVAGDPMVATTHVDLRIEAKRRGIEVRVIHGASIINAAIGLTGLQNYKFGKTVTLPFPSENFFPTSPYDVIKENLE  156 (260)
T ss_pred             CEEEEecCCcceehhHHHHHHHHHHcCCcEEEEcccHHHHHHhhhhhhheeccCCceEecccccCcCCCcHHHHHHHhhh
Confidence            999999999999999999999999999999999999999987 9999999999999999999999999999999999999


Q ss_pred             CCCceEEEEcceee
Q 030179          160 LGLHTLCLLGGVTL  173 (181)
Q Consensus       160 ~~~~tlvlld~~~~  173 (181)
                      .|+||++|||++..
T Consensus       157 ~GLHTl~lLDi~~~  170 (260)
T COG1798         157 RGLHTLVLLDIKED  170 (260)
T ss_pred             cCccceEEEEeccc
Confidence            99999999999864

>PRK04160 diphthine synthase; Provisional

Probab=100.00  E-value=1.9e-31  Score=218.59  Aligned_cols=166  Identities=53%  Similarity=0.816  Sum_probs=132.2

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHH-HHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKIL-SESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~   79 (181)
                      |||+||+|||||++||++|+++|++||+|+++.+++..    ..+.++.+..+.++.....++..+++..+.+. +..++
T Consensus         1 ~l~vVG~GpG~pd~lT~~a~~~L~~advv~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (258)
T PRK04160          1 MLYFIGLGLYDERDITLKGLEALRNADKVYAEFYTSIL----MGTTIEKLEELIGKEIIVLDREDVEQESEKIILEEAKE   76 (258)
T ss_pred             CEEEEECCCCChhhhCHHHHHHHHcCCEEEEecccCcc----ccccHHHHHHHhCCceeecCHHHHHHHHHHHHHHHHcC
Confidence            89999999999999999999999999999998765431    12333344444434322223445566556554 55555


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHh
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR  158 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~  158 (181)
                      ++|++|++|||++|+++.++.+.+++.|++++++|||||+|++ |++|+|++.++.+.++...+.+..+..+++.++++.
T Consensus        77 ~~Vv~L~sGDP~~ys~~~~l~~~l~~~~~~veviPGISS~~aaaa~~g~~~~~~g~~~s~~~~~~~~~~~~~~~~i~~~~  156 (258)
T PRK04160         77 KNVAFLTAGDPMVATTHVDLRLEAKKRGIEVRVIHGVSIYSAAISLTGLQNYKFGKSVTVPFPYGNFFPESPYDVIKDNL  156 (258)
T ss_pred             CCEEEEeCCCCccccCHHHHHHHHHHCCCcEEEECChhHHHHHHHHhCCCcccCCceEEEccCcCCcCCCCHHHHHHHHH
Confidence            8999999999999999999999999889999999999999975 999999999999999887666665556678889999


Q ss_pred             cCCCceEEEEcc
Q 030179          159 SLGLHTLCLLGG  170 (181)
Q Consensus       159 ~~~~~tlvlld~  170 (181)
                      .++.+|+++++.
T Consensus       157 ~~~~~~~vll~~  168 (258)
T PRK04160        157 ERGLHTLVLLDI  168 (258)
T ss_pred             hcCCCcEEEEEe
Confidence            999999999863

>COG2243 CobF Precorrin-2 methylase [Coenzyme metabolism]

Probab=99.98  E-value=1.4e-31  Score=214.23  Aligned_cols=161  Identities=27%  Similarity=0.361  Sum_probs=125.3

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhC--C---cccc---CC-h----HHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG--K---PIAL---AD-R----EMVE   67 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~--~---~~~~---~~-~----~~~~   67 (181)
                      |+|+||+||||||+||+||+++|++||+|++|.....  ++++++   .++.+..  .   .+.|   .+ +    +.|+
T Consensus         3 klygVGvGPGDPeLlTlkAi~~L~~adVi~~P~~~g~--~slAr~---Iv~~y~~~~~~~~~l~fPm~~~~~e~~~~~~~   77 (234)
T COG2243           3 KLYGVGLGPGDPELLTLKAIRALKKADVVYVPSKKGK--GSLARE---IVEDYLTPGSRIVELHFPMTTDMREELEDAWE   77 (234)
T ss_pred             eEEEEecCCCChhhhhHHHHHHHhhCCEEEEecCCCc--cchHHH---HHHHhcCCCceeeEEEeccCCchHHHHHHHHH
Confidence            6899999999999999999999999999999944321  012333   4454432  1   1111   12 2    4578


Q ss_pred             HHHHHHHHHccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCC
Q 030179           68 EKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW  145 (181)
Q Consensus        68 ~~~~~i~~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~  145 (181)
                      ++++.+.+++.+ ++|+|++.|||+|||++.++.++++.+|+++|++|||||+++| |++|+|+...+++.++.+.+.. 
T Consensus        78 e~a~~va~~l~~G~~VAf~~lGDP~~YsTf~~l~~~l~~~~~e~e~VPGVsS~~a~aa~~~~pL~~g~~~l~Vlp~t~~-  156 (234)
T COG2243          78 EAAAEVAAELEAGRDVAFLTLGDPTFYSTFMYLLERLRERGFEVEVVPGVSSFSACAARLGVPLVEGDDSLSVLPATRP-  156 (234)
T ss_pred             HHHHHHHHHHHcCCeEEEEEccCccHHHHHHHHHHHhhccCCceEEeCCcchHHHHHHHhCCceeccCceeEEEeccCc-
Confidence            888888888877 6999999999999999999999999999999999999999986 8999999999999999887653 


Q ss_pred             CCCChHHHHHHHhcCCCceEEEEcceee
Q 030179          146 RPGSFYEKIKRNRSLGLHTLCLLGGVTL  173 (181)
Q Consensus       146 ~~~~~~~~i~~~~~~~~~tlvlld~~~~  173 (181)
                           -+. ........+|.|+|++...
T Consensus       157 -----~~~-~~~~l~~~d~~VvMK~~~~  178 (234)
T COG2243         157 -----DEE-LERALADFDTAVVMKVGRN  178 (234)
T ss_pred             -----hhh-HHhHHhhCCeEEEEecCCc
Confidence                 122 3333344588999987653

>PRK06136 uroporphyrin-III C-methyltransferase; Reviewed

Probab=99.97  E-value=2.5e-31  Score=216.22  Aligned_cols=164  Identities=24%  Similarity=0.293  Sum_probs=122.8

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHH----H-hCCccccCChHHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEK----L-YGKPIALADREMVEEKADKILS   75 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~----~-~~~~~~~~~~~~~~~~~~~i~~   75 (181)
                      |||+||+|||||++||++|+++|++||+|+++.++.       .+.++.+..    . ..+..... ...+++..+.+.+
T Consensus         4 ~l~iVGvGpGdp~~lT~~A~~~L~~advI~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~   75 (249)
T PRK06136          4 KVYLVGAGPGDPDLITLKGVRLLEQADVVLYDDLVS-------PEILAYAKPDAELIYVGKRAGRH-STKQEEINRLLVD   75 (249)
T ss_pred             EEEEEEECCCChHHHHHHHHHHHhcCCEEEEcCCCC-------HHHHhhCCCCCEEEeCCCcCCCC-CcCHHHHHHHHHH
Confidence            689999999999999999999999999999986532       121111110    0 01111010 1123455566666


Q ss_pred             HccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChH-H
Q 030179           76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFY-E  152 (181)
Q Consensus        76 ~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~-~  152 (181)
                      .+++ ++|+++++|||++|+++.++++++++.|++++++|||||++++ |++|+||++++++.++.+.+.|+++.+.. +
T Consensus        76 ~~~~g~~V~~l~~GDP~~ys~~~~l~~~l~~~~~~veviPGISS~~aaaa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~  155 (249)
T PRK06136         76 YARKGKVVVRLKGGDPFVFGRGGEELEALEAAGIPYEVVPGITAAIAAAAYAGIPLTHRGVARSVTFVTGHEAAGKLEPE  155 (249)
T ss_pred             HHHCCCeEEEEeCCCchhhhcHHHHHHHHHHCCCCEEEEcCccHHHHHHHHcCCCcccCCcceeEEEEecccCCCccccc
Confidence            5555 7999999999999999999999999889999999999999975 99999999999988888888888765432 2


Q ss_pred             HHHHHhcCCCceEEEEccee
Q 030179          153 KIKRNRSLGLHTLCLLGGVT  172 (181)
Q Consensus       153 ~i~~~~~~~~~tlvlld~~~  172 (181)
                      ..++++.++.+|+|+++...
T Consensus       156 ~~~~~l~~~~~~~vl~~~~~  175 (249)
T PRK06136        156 VNWSALADGADTLVIYMGVR  175 (249)
T ss_pred             cCHHHHhCCCCeEEEECCHH
Confidence            33467777789999986543

>KOG3123 consensus Diphthine synthase [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=2.5e-31  Score=207.11  Aligned_cols=169  Identities=74%  Similarity=1.203  Sum_probs=156.4

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHHHHccCC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   80 (181)
                      |+|+||+|.|+...||+|.++++++|..|+.+.|+|.+.-|. ..   .++.+++++++..||...++..+.|++.+...
T Consensus         1 mlYlIGlGL~d~kDITlrGLeaVK~c~rVylEaYTSil~~~l-~~---~lEk~yGk~iilADRemvEq~sd~il~~ad~~   76 (272)
T KOG3123|consen    1 MLYLIGLGLGDEKDITLRGLEAVKKCARVYLEAYTSILGVGL-DA---TLEKFYGKEIILADREMVEQESDKILDEADKE   76 (272)
T ss_pred             CeEEEeccCCcccceehhhHHHHhhhheehHHHHHHHHHhhh-hH---HHHHHhCceeEeccHHHHHhhHHHHhhhhhhc
Confidence            899999999999999999999999999999999998753211 11   47888999999999999999899999877778


Q ss_pred             CEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHHHHcCCCcccCCceeEEecccCCCCCCChHHHHHHHhcC
Q 030179           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSL  160 (181)
Q Consensus        81 ~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~  160 (181)
                      +|++|+-|||+..++++.+.-++++.|+++++|..-|.+.|..+.|+.+++||+++++++.++.|+|.++|+.|+.|.+.
T Consensus        77 dVa~LVVGdPfgATTHsDlvlRAk~~~ipv~vIHNASimNavG~CGLqlY~fGetVSiv~ftd~wrP~SfydkI~~Nr~~  156 (272)
T KOG3123|consen   77 DVAFLVVGDPFGATTHSDLVLRAKELGIPVEVIHNASIMNAVGCCGLQLYNFGETVSIVFFTDNWRPESFYDKIKENRQL  156 (272)
T ss_pred             ceEEEEecCcccccchhhhheehhhcCCCeEEEechHHHhhhccceeeeeccCcEEEEEEEccCcCchhHHHHHHHhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEcceee
Q 030179          161 GLHTLCLLGGVTL  173 (181)
Q Consensus       161 ~~~tlvlld~~~~  173 (181)
                      |+|||+|||+|..
T Consensus       157 glHTLcLLDIkvk  169 (272)
T KOG3123|consen  157 GLHTLCLLDIKVK  169 (272)
T ss_pred             CceeEEEEEEeec
Confidence            9999999999863

>TIGR01469 cobA_cysG_Cterm uroporphyrin-III C-methyltransferase

Probab=99.97  E-value=1.3e-30  Score=210.29  Aligned_cols=165  Identities=24%  Similarity=0.273  Sum_probs=121.2

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHH----H-hCCccccCChHHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEK----L-YGKPIALADREMVEEKADKILS   75 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~----~-~~~~~~~~~~~~~~~~~~~i~~   75 (181)
                      +||+||+|||||++||++|+++|++||+|+++.+++       .+.++.+..    + ..+.... ....+++..+.+.+
T Consensus         1 ~i~iVG~GpG~~~~lT~~a~~~l~~advI~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~   72 (236)
T TIGR01469         1 KVYLVGAGPGDPELLTLKALRLLQEADVVLYDALVS-------PEILAYAPPQAELIDVGKRPGC-HSKKQEEINRLLVE   72 (236)
T ss_pred             CEEEEecCCCChHHhHHHHHHHHHhCCEEEEeCCCC-------HHHHhhCCCCCEEEeCCCCCCC-CCCCHHHHHHHHHH
Confidence            689999999999999999999999999999976542       121111110    0 0111001 11235566666666


Q ss_pred             HccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHH
Q 030179           76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEK  153 (181)
Q Consensus        76 ~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~  153 (181)
                      .+++ ++|+++++|||++|+++.++++++.+.+++++++|||||+|++ |++|+||++++.+.++.+.+.|+++.+....
T Consensus        73 ~~~~g~~V~~l~~GDP~~~~~~~~l~~~~~~~~~~v~viPGiSs~~~a~a~~g~~l~~~~~~~~~~i~~~~~~~~~~~~~  152 (236)
T TIGR01469        73 LAREGKKVVRLKGGDPFVFGRGGEEAEALAEAGIPFEVVPGVTSAIAAAAYAGIPLTHRGVASSVTFVTGHEADDKALEV  152 (236)
T ss_pred             HHHCCCeEEEEeCcCcccccCHHHHHHHHHHCCCCEEEECCccHHHHHHHHcCCCcccCCCcceEEEEEcccCCCccccc
Confidence            5555 7999999999999999999999998889999999999999975 9999999998865566666778776442222


Q ss_pred             HHHHhcCCCceEEEEcceee
Q 030179          154 IKRNRSLGLHTLCLLGGVTL  173 (181)
Q Consensus       154 i~~~~~~~~~tlvlld~~~~  173 (181)
                      .++++..+.+|+|+++...+
T Consensus       153 ~~~~~~~~~~~~vl~~~~~~  172 (236)
T TIGR01469       153 DWEALAKGAGTLVIYMGVRN  172 (236)
T ss_pred             CHHHHhcCCCeEEEECCHHH
Confidence            35667777789999875443

This model represents enzymes, or enzyme domains, with uroporphyrin-III C-methyltransferase activity. This enzyme catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). Cobalamin contains cobalt while siroheme contains iron. Siroheme is a cofactor for nitrite and sulfite reductases and therefore plays a role in cysteine biosynthesis; many members of this family are CysG, siroheme synthase, with an additional N-terminal domain and with additional oxidation and iron insertion activities.

>PRK05948 precorrin-2 methyltransferase; Provisional

Probab=99.97  E-value=3.1e-30  Score=209.00  Aligned_cols=161  Identities=20%  Similarity=0.211  Sum_probs=118.8

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhC--Cccc---c---CCh----HHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG--KPIA---L---ADR----EMVEE   68 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~--~~~~---~---~~~----~~~~~   68 (181)
                      ++|+||+|||||++||+||+++|++||+|++|.....-. +++.+   .++.+..  +.+.   |   .++    ..|++
T Consensus         5 ~ly~VGvGPGdp~LlTlkA~~~L~~advi~~p~~~~~~~-s~a~~---i~~~~~~~~~~~~~l~fpm~~~~~~~~~~~~~   80 (238)
T PRK05948          5 TLYGISVGPGDPELITLKGLRLLQSAPVVAFPAGLAGQP-GLAEQ---IIAPWLSPQQIKLPLYFPYVQDEEQLEQAWQA   80 (238)
T ss_pred             EEEEEEecCCChHHhHHHHHHHHhhCCEEEEeCCCCCch-hHHHH---HHHHHcCCCcEEEEecCCccCChHHHHHHHHH
Confidence            589999999999999999999999999999986431100 01122   3443321  1111   1   122    34677


Q ss_pred             HHHHHHHHccC-CCEEEEecCCccccccHHHHHHHHHh--CCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCC
Q 030179           69 KADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKK--LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET  144 (181)
Q Consensus        69 ~~~~i~~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~--~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~  144 (181)
                      .++.+.+.+++ ++|++|++|||++||++.++.+.+++  .|+++|+||||||++++ |++|+||++.++++.+++.+  
T Consensus        81 ~~~~i~~~~~~g~~v~~l~~GDp~~ys~~~~l~~~l~~~~~~~~veivPGIss~~a~aa~~g~pL~~~~e~l~ii~~~--  158 (238)
T PRK05948         81 AADQVWHYLEQGEDVAFACEGDVSFYSTFTYLAQTLQELYPQVAIQTIPGVCSPLAAAAALGIPLTLGSQRLAILPAL--  158 (238)
T ss_pred             HHHHHHHHHHcCCeEEEEeCCChHHHHHHHHHHHHHHhcCCCCCEEEECChhHHHHHHHHhCCCeecCCCeEEEEcCC--
Confidence            78888887766 79999999999999999999999876  48999999999999975 89999999999888887643  


Q ss_pred             CCCCChHHHHHHHhcCCCceEEEEccee
Q 030179          145 WRPGSFYEKIKRNRSLGLHTLCLLGGVT  172 (181)
Q Consensus       145 ~~~~~~~~~i~~~~~~~~~tlvlld~~~  172 (181)
                      .++    +.+...+ ...+++|+|+...
T Consensus       159 ~~~----~~l~~~l-~~~~~vVlmk~~~  181 (238)
T PRK05948        159 YHL----EELEQAL-TWADVVVLMKVSS  181 (238)
T ss_pred             CCH----HHHHHHH-hCCCEEEEEECCc
Confidence            222    2333333 3457999998764

>TIGR01465 cobM_cbiF precorrin-4 C11-methyltransferase

Probab=99.97  E-value=4e-30  Score=206.68  Aligned_cols=160  Identities=21%  Similarity=0.192  Sum_probs=117.9

Q ss_pred             EEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC-
Q 030179            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE-   79 (181)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~-   79 (181)
                      ||+||+|||||++||++|+++|++||+|++++..      ...+   .++.+. ++.........++++.+.+.+.+++ 
T Consensus         1 v~iVG~GpG~~~~lT~~a~~~l~~advV~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g   71 (229)
T TIGR01465         1 VYFIGAGPGDPDLITVKGRKLLESADVILYAGSL------VPPE---LLAWCRPGAEVVNSAGMSLEEIVDIMSDAHREG   71 (229)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHHhCCEEEEeCCC------CCHH---HHhhCCCCCEEEEcCCCCHHHHHHHHHHHHHCC
Confidence            6899999999999999999999999999996431      0111   121111 1121111112356677777776655 


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCC-ChHHHHHHH
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPG-SFYEKIKRN  157 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~-~~~~~i~~~  157 (181)
                      ++|++|++|||++|+++.++++++++.|++++++|||||++++ |++|+||+.++++.++.+.+.|+++. ...+. +..
T Consensus        72 ~~V~~L~~GDP~~~~~~~~l~~~~~~~g~~veviPGiSS~~aa~a~~g~~l~~~~~~~~~~~~~~~g~~~~~~~~~-l~~  150 (229)
T TIGR01465        72 KLVVRLHTGDPSIYGAIAEQMQLLEALGIPYEVVPGVSSFFAAAAALGAELTVPEVSQTVILTRAEGRTPMPEGEK-LAD  150 (229)
T ss_pred             CeEEEEeCcCccccccHHHHHHHHHHCCCCEEEECChhHHHHHHHHcCCCccccCCccEEEEEeccCCCCCCChHH-HHH
Confidence            7999999999999999999999999999999999999999976 89999999998888888888888642 22233 334


Q ss_pred             hcCCCceEEEEcce
Q 030179          158 RSLGLHTLCLLGGV  171 (181)
Q Consensus       158 ~~~~~~tlvlld~~  171 (181)
                      +.....+++++...
T Consensus       151 ~~~~~~~~vi~~~~  164 (229)
T TIGR01465       151 LAKHGATMAIFLSA  164 (229)
T ss_pred             HhcCCCeEEEECcH
Confidence            44444677777543

This model represents precorrin-4 C11-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-3B C17-methyltransferase, EC 2.1.1.131). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products.

>PF00590 TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Methylases Note this Prosite entry does not include all members of this family

Probab=99.97  E-value=1.2e-29  Score=200.62  Aligned_cols=156  Identities=31%  Similarity=0.314  Sum_probs=117.6

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhC-----CccccCChHHHHHHHHHH--
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG-----KPIALADREMVEEKADKI--   73 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~i--   73 (181)
                      |||+||+|||||++||++|+++|++||+|+++.+           +++.+..+..     ..........+++..+.+  
T Consensus         1 ~l~iVG~GpG~~~~lT~~a~~~l~~advv~~~~r-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   69 (210)
T PF00590_consen    1 KLYIVGLGPGDPDLLTLRALEALKNADVVIGPER-----------ALEIVRDLLPEIFPMGKDRESLEESYDEIAEIIEA   69 (210)
T ss_dssp             EEEEEEEBSSSGGGSBHHHHHHHHHSSEEEEETT-----------CHHHHHHHHHTEETTSSEEEEEHHHHHHHHHHHHH
T ss_pred             CEEEEecCCCCHHHHHHHHHHHHHhCCccccccc-----------chHHHHhhccccccccccccchhhhhhHHHHHHHH
Confidence            7999999999999999999999999999999753           2224433321     110011134577777777  


Q ss_pred             HHHccC-CCEEEEecCCccccccHHHHHHHHHh--CCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCC
Q 030179           74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKK--LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGS  149 (181)
Q Consensus        74 ~~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~--~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~  149 (181)
                      .+.+++ ++|+++++|||++|+++.++++.+++  .|++++++|||||++++ |++|+||++++....+.     .++.+
T Consensus        70 ~~~~~~g~~V~~l~~GDP~~~~~~~~l~~~l~~~~~gi~v~iiPGiSs~~~a~a~~g~~~~~~~~~~~~~-----~~~~~  144 (210)
T PF00590_consen   70 IEAAKEGKDVVVLVSGDPLFFSTGSYLVRALRAEERGIEVEIIPGISSFQAAAARLGIPLTDGGFISLHG-----LRDLD  144 (210)
T ss_dssp             HHHHHTTSEEEEEESBSTTSSSSHHHHHHHHHHHHTTCEEEEE--TTHHHHHHHHCTSTSSBTTTBEEEE-----TSSSS
T ss_pred             HHHHhccCCEEEeCCCCCCcccHHHHHHHHHHhhcCCCceEEEecCcHHHHHHHHHcCCcccCcEEEEEE-----ecccc
Confidence            666655 78999999999999999999999988  99999999999999975 99999999988777665     12211


Q ss_pred             -hHHHHHHHhcCCCceEEEEccee
Q 030179          150 -FYEKIKRNRSLGLHTLCLLGGVT  172 (181)
Q Consensus       150 -~~~~i~~~~~~~~~tlvlld~~~  172 (181)
                       .....+.++..+.+|+++++...
T Consensus       145 ~~~~~~l~~~~~~~~~~vil~~~~  168 (210)
T PF00590_consen  145 TEREKLLENLLANGDTLVILTDPR  168 (210)
T ss_dssp             HHHHHHHHHHHTTTSEEEEEESGC
T ss_pred             cchHHHHHHHHhCCCEEEEEccCc
Confidence             24556777777789999995443

; InterPro: IPR000878 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including cobalamin (vitamin B12), haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. This entry represents several tetrapyrrole methylases, which consist of two non-similar domains. These enzymes catalyse the methylation of their substrates using S-adenosyl-L-methionine as a methyl source. Enzymes in this family include: Uroporphyrinogen III methyltransferase (2.1.1.107 from EC) (SUMT), which catalyses the conversion of uroporphyrinogen III to precorrin-2 at the first branch-point of the tetrapyrrole synthesis pathway, directing the pathway towards cobalamin or sirohaem synthesis []. Precorrin-2 C20-methyltransferase CobI/CbiL (2.1.1.130 from EC), which introduces a methyl group at C-20 on precorrin-2 to produce precorrin-3A during cobalamin biosynthesis. This reaction is key to the conversion of a porphyrin-type tetrapyrrole ring to a corrin ring []. In some species, this enzyme is part of a bifunctional protein. Precorrin-4 C11-methyltransferase CobM/CbiF (2.1.1.133 from EC), which introduces a methyl group at C-11 on precorrin-4 to produce precorrin-5 during cobalamin biosynthesis []. Sirohaem synthase CysG (2.1.1.107 from EC), domains 4 and 5, which synthesizes sirohaem from uroporphyrinogen III, at the first branch-point in the tetrapyrrole biosynthetic pathway, directing the pathway towards sirohaem synthesis []. Diphthine synthase (2.1.1.98 from EC), which carries out the methylation step during the modification of a specific histidine residue of elongation factor 2 (EF-2) during diphthine synthesis. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 2ZVC_A 2ZVB_A 1WDE_A 3ND1_A 2E0K_A 2E0N_B 1VA0_B 1V9A_A 3I4T_A 3NDC_B ....

>COG0007 CysG Uroporphyrinogen-III methylase [Coenzyme metabolism]

Probab=99.97  E-value=1.6e-30  Score=209.16  Aligned_cols=168  Identities=23%  Similarity=0.272  Sum_probs=130.3

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhh----HHH-hCCccccCChHHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTL----EKL-YGKPIALADREMVEEKADKILS   75 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~----~~~-~~~~~~~~~~~~~~~~~~~i~~   75 (181)
                      ++|+||.|||||++||+||.++|++||+|+|+...+.       +.++.+    +.+ .+|..-.+ ....+++.+.+.+
T Consensus         5 kV~lVGAGPGdp~LLTlka~~~L~~ADvvlyD~LV~~-------~il~~~~~~a~~i~vGkr~g~~-~~~q~eIn~~lv~   76 (244)
T COG0007           5 KVYLVGAGPGDPGLLTLRALRALQEADVVLYDRLVPE-------EVLALARRDAERIYVGKRPGGH-SKPQDEINALLVE   76 (244)
T ss_pred             eEEEEecCCCChhhhhHHHHHHHhhCCEEEEcCcCCH-------HHHHhhccCCEEEEecCcCCCC-CCCHHHHHHHHHH
Confidence            5899999999999999999999999999999876542       211111    111 13322111 1123567777888


Q ss_pred             HccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHH
Q 030179           76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEK  153 (181)
Q Consensus        76 ~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~  153 (181)
                      ++++ ++|++|+.|||++|+++.++.+.+.+.|+++||+|||||..++ +..|+|+++.+.+.++.+.+.|.++..   .
T Consensus        77 ~a~~G~~VVRLKgGDP~iFGRggEE~~~l~~~gI~~eVVPGiTSa~a~~a~agIPlT~R~~a~s~~~vTgh~~~~~---~  153 (244)
T COG0007          77 LAREGKRVVRLKGGDPYIFGRGGEEIEALAEAGIEFEVVPGITSAIAAPAYAGIPLTHRGVASSFTFVTGHDRDGK---L  153 (244)
T ss_pred             HHhcCCeEEEecCCCCCeecCcHHHHHHHHHcCCceEEeCccchHHHHHHHcCCceeecCccceEEEEeCcCCCCC---c
Confidence            7777 7999999999999999999999999999999999999997765 899999999999999999999987644   3


Q ss_pred             HHHHhcCCCceEEEE-------cceeeeeccCC
Q 030179          154 IKRNRSLGLHTLCLL-------GGVTLCVDHSL  179 (181)
Q Consensus       154 i~~~~~~~~~tlvll-------d~~~~~~~~~~  179 (181)
                      .|..+.....|+|+|       ++.+.|.+||+
T Consensus       154 ~w~~la~~~~TlVi~Mg~~~l~~i~~~Li~~G~  186 (244)
T COG0007         154 DWEALARSVGTLVILMGASRLAEIARELIAHGR  186 (244)
T ss_pred             ChHHhcccCCCEEEEeCcchHHHHHHHHHHcCC
Confidence            466677677788776       55556666654

>PRK05990 precorrin-2 C(20)-methyltransferase; Reviewed

Probab=99.97  E-value=3.5e-29  Score=203.38  Aligned_cols=155  Identities=17%  Similarity=0.218  Sum_probs=111.6

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhC--Ccc---cc---CC----------
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG--KPI---AL---AD----------   62 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~--~~~---~~---~~----------   62 (181)
                      +||+||+|||||++||+||+++|++||+|+++...+.     ...+++.++.+..  ..+   .+   .+          
T Consensus         4 ~l~~VG~GPGdp~LlTlkA~~~L~~advi~~~~~~~~-----~~~a~~i~~~~~~~~~~~~~~~~pm~~~~~~~~~~~~~   78 (241)
T PRK05990          4 RLIGLGVGPGDPELLTLKALRLLQAAPVVAYFVAKGK-----KGNAFGIVEAHLSPGQTLLPLVYPVTTEILPPPLCYET   78 (241)
T ss_pred             eEEEEeCCCCChHHhhHHHHHHHhhCCEEEEECCCCC-----cchHHHHHHHHcCCCceEEEeecCCccccccccchhhh
Confidence            5899999999999999999999999999999854311     0111123333321  111   11   01          


Q ss_pred             --hHHHHHHHHHHHHHccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEE
Q 030179           63 --REMVEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSI  138 (181)
Q Consensus        63 --~~~~~~~~~~i~~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v  138 (181)
                        ...|+++++.+.+++++ ++|++|++|||++||++.++.+.++ .++++|+||||||++++ |++|+||+..++.+++
T Consensus        79 ~~~~~~~~~~~~i~~~~~~G~~Vv~L~~GDP~iyst~~~l~~~l~-~~i~~evIPGISS~~aaaA~~gipL~~~~~~~~i  157 (241)
T PRK05990         79 VIADFYDTSAEAVAAHLDAGRDVAVICEGDPFFYGSYMYLHDRLA-PRYETEVIPGVCSMLGCWSVLGAPLVYRNQSLSV  157 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCeEEEEeCCCcHHHhHHHHHHHHHh-cCCCEEEECcHHHHHHHHHHhCCCeEcCCeEEEE
Confidence              23467788888888766 7999999999999999999988885 47999999999999975 8999999988887777


Q ss_pred             ecccCCCCCCChHHHHHHHhcCCCceEEE
Q 030179          139 PFFTETWRPGSFYEKIKRNRSLGLHTLCL  167 (181)
Q Consensus       139 ~~~~~~~~~~~~~~~i~~~~~~~~~tlvl  167 (181)
                      +....   +   .+.+++.+.....++++
T Consensus       158 ~~~~~---~---~~~l~~~l~~~~~~vv~  180 (241)
T PRK05990        158 LSGVL---P---EEELRRRLADADAAVIM  180 (241)
T ss_pred             EcCCC---C---hHHHHHHHhCCCCEEEE
Confidence            65321   2   23455555555344444

>PLN02625 uroporphyrin-III C-methyltransferase

Probab=99.96  E-value=2.2e-29  Score=206.85  Aligned_cols=162  Identities=24%  Similarity=0.271  Sum_probs=119.3

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHH-----HhCCccccCChHHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEK-----LYGKPIALADREMVEEKADKILS   75 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~   75 (181)
                      +||+||+|||||++||++|+++|++||+|+++.+..       .+.++.+..     ..++..... ...+++..+.+.+
T Consensus        16 ~l~vVG~GpGdp~~LTl~a~~~l~~ADvI~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~   87 (263)
T PLN02625         16 NVFLVGTGPGDPDLLTLKALRLLQTADVVLYDRLVS-------PDILDLVPPGAELLYVGKRGGYH-SRTQEEIHELLLS   87 (263)
T ss_pred             EEEEEEeCCCChHHhHHHHHHHHhcCCEEEEeCcCC-------HHHHHhcCCCCEEEecCCcCCcc-ccCHHHHHHHHHH
Confidence            589999999999999999999999999999986532       121111110     001110111 1235666676766


Q ss_pred             HccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHH-
Q 030179           76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYE-  152 (181)
Q Consensus        76 ~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~-  152 (181)
                      .+.+ ++|++|++|||++|+++.++++.+++.|++++++|||||++++ |++|+||++.+...++.+.+.|+++.+..+ 
T Consensus        88 ~~~~g~~Vvvl~~GDP~~ys~~~~l~~~l~~~~~~veiiPGISS~~aaaA~lg~pl~~~~~~~~~~i~s~h~~~~~~~~~  167 (263)
T PLN02625         88 FAEAGKTVVRLKGGDPLVFGRGGEEMDALRKNGIPVTVVPGITAAIGAPAELGIPLTHRGVATSVRFLTGHDREGGTDPL  167 (263)
T ss_pred             HHHCCCeEEEEcCCCchhhhhHHHHHHHHHHCCCCEEEECCccHHHHHHHHcCCCcccCCccceEEEEecccCCCcccch
Confidence            6545 7999999999999999999999998889999999999999975 999999998876656666778887643211 


Q ss_pred             HHHHHhcCCCceEEEEcc
Q 030179          153 KIKRNRSLGLHTLCLLGG  170 (181)
Q Consensus       153 ~i~~~~~~~~~tlvlld~  170 (181)
                      ..+..+..+.+|+|+++.
T Consensus       168 ~~~~~~~~~~~t~vl~~~  185 (263)
T PLN02625        168 DVAEAAADPDTTLVVYMG  185 (263)
T ss_pred             hhHHHHhCCCCeEEEECc
Confidence            235555666789999864

>PRK15473 cbiF cobalt-precorrin-4 C(11)-methyltransferase; Provisional

Probab=99.96  E-value=2.2e-29  Score=206.29  Aligned_cols=162  Identities=17%  Similarity=0.130  Sum_probs=116.5

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      +||+||+|||||++||++|+++|++||+|+++...      ...+   .++.+. .+.........++++.+.+.+.+++
T Consensus         9 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~------~~~~---l~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~   79 (257)
T PRK15473          9 CVWFVGAGPGDKELITLKGYRLLQQAQVVIYAGSL------INTE---LLDYCPAQAECHDSAELHLEQIIDLMEAGVKA   79 (257)
T ss_pred             EEEEEEeCCCChHHhhHHHHHHHHhCCEEEEeccc------CCHH---HHhhcCCCCEEEecCCCCHHHHHHHHHHHHHC
Confidence            58999999999999999999999999999997431      0111   111111 1111111113466777777776655


Q ss_pred             -CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCCh-HHHHHH
Q 030179           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF-YEKIKR  156 (181)
Q Consensus        80 -~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~-~~~i~~  156 (181)
                       ++|++|++|||++||++.++++++.+.+++++++|||||+|++ |++|+||+..+.+-++.+.+.|++...+ .+. +.
T Consensus        80 g~~Vv~L~sGDP~~yg~~~~l~~~l~~~~i~veiiPGISS~~aaaA~lg~pl~~~~~~~~~~v~s~hG~~~~~~~~~-l~  158 (257)
T PRK15473         80 GKTVVRLQTGDVSLYGSIREQGEELTKRGIDFQVVPGVSSFLGAAAELGVEYTVPEVSQSLIITRMEGRTPVPAREQ-LE  158 (257)
T ss_pred             CCeEEEEeCcCchhhhhHHHHHHHHHHCCCCEEEeCChhHHHHHHHHcCCCcccccccccEEEEeecCCCCCCchhh-HH
Confidence             7999999999999999999999999889999999999999975 9999999864443444455677774321 223 45


Q ss_pred             HhcCCCceEEEEccee
Q 030179          157 NRSLGLHTLCLLGGVT  172 (181)
Q Consensus       157 ~~~~~~~tlvlld~~~  172 (181)
                      .+.....|+|++....
T Consensus       159 ~~~~~~~t~vi~~~~~  174 (257)
T PRK15473        159 SFASHQTSMAIFLSVQ  174 (257)
T ss_pred             HHhcCCCeEEEECCch
Confidence            5556667888886544

>PRK05576 cobalt-precorrin-2 C(20)-methyltransferase; Validated

Probab=99.96  E-value=1.3e-28  Score=198.54  Aligned_cols=159  Identities=27%  Similarity=0.330  Sum_probs=116.5

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCc--cc---c---CC----hHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKP--IA---L---AD----REMVEE   68 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~--~~---~---~~----~~~~~~   68 (181)
                      |||+||+|||||++||++|+++|++||+|++++++..-    ....++.+..+..+.  ..   +   .+    ...|++
T Consensus         3 ~l~vVG~GpG~~~~lT~~a~~~l~~advV~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (229)
T PRK05576          3 KLYGIGLGPGDPELLTVKAARILEEADVVYAPASRKGG----GSLALNIVRPYLKEETEIVELHFPMSKDEEEKEAVWKE   78 (229)
T ss_pred             EEEEEEeCCCChHHHHHHHHHHHhcCCEEEEECCCCCc----hhHHHHHHHHhcCCCCEEEEeeCCCCCChHHHHHHHHH
Confidence            68999999999999999999999999999998654210    011112334333211  11   1   11    234667


Q ss_pred             HHHHHHHHccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCC
Q 030179           69 KADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR  146 (181)
Q Consensus        69 ~~~~i~~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~  146 (181)
                      ..+.+.+++++ ++|++|++|||++|+++.++.+.+++.|++++++|||||+|++ |++|+||+..++.+.+++.  |+ 
T Consensus        79 ~~~~i~~~~~~g~~V~~l~~GDP~~y~~~~~l~~~~~~~~~~v~viPGiSs~~~a~a~~g~~l~~~~~~~~iis~--~~-  155 (229)
T PRK05576         79 NAEEIAAEAEEGKNVAFITLGDPNLYSTFSHLLEYLKCHDIEVETVPGISSFTAIASRAGVPLAMGDESLAIIPA--TR-  155 (229)
T ss_pred             HHHHHHHHHHcCCcEEEEeCcCccccccHHHHHHHHHhCCCCEEEeCChhHHHHHHHHcCCCcccCCceEEEEEC--CC-
Confidence            77777776655 7999999999999999999999998878999999999999975 8999999988776776644  43 


Q ss_pred             CCChHHHHHHHhcCCCceEEEEcce
Q 030179          147 PGSFYEKIKRNRSLGLHTLCLLGGV  171 (181)
Q Consensus       147 ~~~~~~~i~~~~~~~~~tlvlld~~  171 (181)
                          .+.+...+.. ..|+|++...
T Consensus       156 ----~~~l~~~l~~-~~~~vl~~~~  175 (229)
T PRK05576        156 ----EALIEQALTD-FDSVVLMKVY  175 (229)
T ss_pred             ----HHHHHHHhhc-CCEEEEEecC
Confidence                2344455544 4788888643

>PRK05787 cobalt-precorrin-6Y C(5)-methyltransferase; Validated

Probab=99.96  E-value=5.9e-29  Score=197.39  Aligned_cols=150  Identities=25%  Similarity=0.344  Sum_probs=106.3

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      |||+||+|||||++||++|+++|++||+|+++.           ++++.+..+. .+.....  ..+++..+.+....++
T Consensus         1 ~l~vVG~GpG~~~~lT~~a~~~l~~advv~~~~-----------~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~g   67 (210)
T PRK05787          1 MIYIVGIGPGDPEYLTLKALEAIRKADVVVGSK-----------RVLELFPELIDGEAFVLT--AGLRDLLEWLELAAKG   67 (210)
T ss_pred             CEEEEEeCCCChHHhhHHHHHHHHhCCEEEEcH-----------hHHHHHHHhccCccEEec--CCHHHHHHHHHHhhCC
Confidence            899999999999999999999999999999852           3334555443 2222111  1123444444433345


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHh
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR  158 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~  158 (181)
                      ++|+++++|||++||.+..+.+.+ ..+++++++|||||+|++ |++|+||+++      .+.+.|+++... +.+...+
T Consensus        68 ~~V~~l~~GDP~~~~~~~~~~~~~-~~~~~veviPGiSs~~aaaa~~g~~l~~~------~~is~~~~~~~~-~~l~~~~  139 (210)
T PRK05787         68 KNVVVLSTGDPLFSGLGKLLKVRR-AVAEDVEVIPGISSVQYAAARLGIDMNDV------VFTTSHGRGPNF-EELEDLL  139 (210)
T ss_pred             CcEEEEecCCccccccHHHHHHHh-ccCCCeEEEcCHHHHHHHHHHhCCCHHHc------EEEeecCCCcch-HHHHHHH
Confidence            899999999999999776665544 334899999999999975 8999999963      234567776443 4456666


Q ss_pred             cCCCceEEEEcce
Q 030179          159 SLGLHTLCLLGGV  171 (181)
Q Consensus       159 ~~~~~tlvlld~~  171 (181)
                      ..+.++++++|..
T Consensus       140 ~~~~~~v~l~~~~  152 (210)
T PRK05787        140 KNGRKVIMLPDPR  152 (210)
T ss_pred             HcCCeEEEEcCCC
Confidence            6777777777544

>TIGR01467 cobI_cbiL precorrin-2 C20-methyltransferase

Probab=99.96  E-value=4.2e-28  Score=195.44  Aligned_cols=159  Identities=28%  Similarity=0.358  Sum_probs=114.6

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhC---Cccc---c---CCh----HHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG---KPIA---L---ADR----EMVE   67 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~---~~~~---~---~~~----~~~~   67 (181)
                      |||+||+|||||++||++|+++|++||+|+++.+...    ...+.++.+..+..   +++.   +   .++    ..++
T Consensus         2 ~i~iVG~GpG~~~~lT~~a~~~l~~advV~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (230)
T TIGR01467         2 KLYGVGVGPGDPELITVKALEALRSADVIAVPASKKG----RESLARKIVEDYLKPNDTRILELVFPMTKDRDELEKAWD   77 (230)
T ss_pred             EEEEEEecCCCcHHHHHHHHHHHhhCCEEEEeCCCCC----CcchHHHHHHHhcCccCceEEEEeccccCChHHHHHHHH
Confidence            6899999999999999999999999999999876321    00122334343332   2211   1   111    2355


Q ss_pred             HHHHHHHHHccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCC
Q 030179           68 EKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW  145 (181)
Q Consensus        68 ~~~~~i~~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~  145 (181)
                      ++++.+.+.+++ ++|++|++|||++|+++.++.+++.+.|++++++|||||++++ |++|+||++.+..+++..  .|.
T Consensus        78 ~~~~~i~~~~~~g~~Vv~l~~GDP~~y~~~~~l~~~~~~~~~~veviPGiSs~~~a~a~~g~~l~~~~~~~~~~~--~~~  155 (230)
T TIGR01467        78 EAAEAVAAELEEGRDVAFLTLGDPSLYSTFSYLLQRLQGMGIEVEVVPGITSFAACASAAGLPLVEGDESLAILP--ATA  155 (230)
T ss_pred             HHHHHHHHHHHCCCcEEEEeCCCCCcccCHHHHHHHHHHCCCcEEEeCChhHHHHHHHHhCCCcccCCceEEEEe--CCC
Confidence            677777776665 7999999999999999999999998878999999999999975 899999998776666653  333


Q ss_pred             CCCChHHHHHHHhcCCCceEEEEcc
Q 030179          146 RPGSFYEKIKRNRSLGLHTLCLLGG  170 (181)
Q Consensus       146 ~~~~~~~~i~~~~~~~~~tlvlld~  170 (181)
                      +    .+.+.+.+..+ .|+++|..
T Consensus       156 ~----~~~~~~~~~~~-~~vvil~~  175 (230)
T TIGR01467       156 G----EAELEKALAEF-DTVVLMKV  175 (230)
T ss_pred             C----HHHHHHHhccC-CeEEEEec
Confidence            2    23444555554 56666643

This model represents precorrin-2 C20-methyltransferase, one of several closely related S-adenosylmethionine-dependent methyltransferases involved in cobalamin (vitamin B12) biosynthesis.

>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]

Probab=99.96  E-value=1.2e-28  Score=194.87  Aligned_cols=161  Identities=24%  Similarity=0.283  Sum_probs=124.6

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      ++|+||.||||||+||+|+++.|++||+|+|...-      ++++   .++.+. +.++.-.-..+++++.+.+.+..++
T Consensus         4 ~VyFIGAGPGdpdLiTvkg~~ll~~advviYAGSL------V~~e---lL~~~~~~aei~nSa~~tLeeIi~~m~~a~~~   74 (254)
T COG2875           4 KVYFIGAGPGDPDLITVKGQRLLEKADVVIYAGSL------VPPE---LLEYCRPDAEIVNSASLTLEEIIDLMVDAVRE   74 (254)
T ss_pred             eEEEEccCCCCcceeeehHHHHHhhCCEEEECCCc------CCHH---HHhhcCCCCEEEecCcCCHHHHHHHHHHHHHc
Confidence            58999999999999999999999999999997542      2344   333321 2222211123578888888887766


Q ss_pred             -CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCC-CCChHHHHHH
Q 030179           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR-PGSFYEKIKR  156 (181)
Q Consensus        80 -~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~-~~~~~~~i~~  156 (181)
                       |+|++|.+|||.+||...+..+++++.|++++++||||||.|+ |.+|..++..+.+.++++....+| |...-+.+..
T Consensus        75 Gk~VvRLhSGDpsiYgA~~EQm~~L~~~gI~yevvPGVss~~AAAA~L~~ELT~P~vsQtvilTR~sgrt~vpe~e~l~~  154 (254)
T COG2875          75 GKDVVRLHSGDPSIYGALAEQMRELEALGIPYEVVPGVSSFAAAAAALGIELTVPGVSQTVILTRPSGRTPVPEKESLAA  154 (254)
T ss_pred             CCeEEEeecCChhHHHHHHHHHHHHHHcCCCeEEeCCchHHHHHHHHhCceeecCCcceeEEEEccccCCCCCchhHHHH
Confidence             8999999999999999999999999999999999999999875 889999999998888887666666 3333566666


Q ss_pred             HhcCCCceEEEEcc
Q 030179          157 NRSLGLHTLCLLGG  170 (181)
Q Consensus       157 ~~~~~~~tlvlld~  170 (181)
                      -...+..+.+||.+
T Consensus       155 la~~~aTm~I~L~v  168 (254)
T COG2875         155 LAKHGATMVIFLGV  168 (254)
T ss_pred             HHhcCceeEeeehh
Confidence            66666566666644

>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism]

Probab=99.96  E-value=7.1e-29  Score=196.26  Aligned_cols=148  Identities=22%  Similarity=0.265  Sum_probs=111.7

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhC-CccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG-KPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      |+++||+||||+++||.+|+++|++||+|++.           +|+|+.++.+.. +...+... ...+..+.+.++.++
T Consensus         1 ~I~vVGiGp~~~~~Lt~~A~~~I~~A~vV~G~-----------kr~L~~~~~~~~~~~~~~~~~-~~~~~l~~i~~~~~g   68 (210)
T COG2241           1 MITVVGIGPGGPEGLTLAAIEAIRRADVVAGS-----------KRHLELLPPLIKAERIIWPYP-FDAESLEEILAERKG   68 (210)
T ss_pred             CEEEEEeCCCChhhhcHHHHHHHHhCCEEeec-----------HHHHHhhhccccceEEEeccc-cchHHHHHHHHHhCC
Confidence            89999999999999999999999999999974           677777776653 33333222 222233445444457


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHh
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR  158 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~  158 (181)
                      ++||+|++|||+||+.+..+.+.+..  .+++|+|||||+|+| ||+|++|++      +.+.|.|+++   .+.+...+
T Consensus        69 ~~v~VLasGDP~f~G~g~~l~~~~~~--~~v~iIPgiSS~q~a~ARlg~~~~~------~~~islHgr~---~~~l~~~~  137 (210)
T COG2241          69 RDVVVLASGDPLFSGVGRLLRRKFSC--EEVEIIPGISSVQLAAARLGWPLQD------TEVISLHGRP---VELLRPLL  137 (210)
T ss_pred             CCeEEEecCCcchhhhHHHHHHhcCc--cceEEecChhHHHHHHHHhCCChHH------eEEEEecCCC---HHHHHHHH
Confidence            89999999999999999888877654  389999999999975 999999997      4456788888   55666666


Q ss_pred             cCCCceEEEEcce
Q 030179          159 SLGLHTLCLLGGV  171 (181)
Q Consensus       159 ~~~~~tlvlld~~  171 (181)
                      ..+...+++.+-+
T Consensus       138 ~~~~~~vil~~~~  150 (210)
T COG2241         138 ENGRRLVILTPDD  150 (210)
T ss_pred             hCCceEEEeCCCC
Confidence            5555555555543

>PRK08284 precorrin 6A synthase; Provisional

Probab=99.96  E-value=3.1e-28  Score=198.82  Aligned_cols=140  Identities=21%  Similarity=0.263  Sum_probs=100.9

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhC---Ccc---cc--CC---------h
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG---KPI---AL--AD---------R   63 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~---~~~---~~--~~---------~   63 (181)
                      +||+||+||||||+||+||+++|++||+|++|.....- .++..-..+.++.+..   ..+   .+  .+         .
T Consensus         3 kly~VGvGPGDPeLLTlkA~r~L~~advV~~p~~~~~~-~~la~~a~~iv~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~   81 (253)
T PRK08284          3 RLLLIGIGAGDPDHLTLQAIKALNRADVFFVPDKGADK-DDLVALRREICARHITGPGYRVVEFDDPVRDRAPDDYRAAV   81 (253)
T ss_pred             EEEEEEecCCChhHhhHHHHHHHHhCCEEEEECCCCCc-hhHHHHHHHHHHHHhcCCCceEEecCCCCcccchhhhhhhh
Confidence            58999999999999999999999999999998652100 0011001123333321   111   11  01         1


Q ss_pred             HHHHHH-----HHHHHHHccC-CCEEEEecCCccccccHHHHHHHHHh---CCCcEEEECCccHHHHH-HHcCCCcccCC
Q 030179           64 EMVEEK-----ADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKK---LGIQVKAVHNASVMNAV-GICGLQLYRFG  133 (181)
Q Consensus        64 ~~~~~~-----~~~i~~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~---~g~~v~iiPGiSs~~a~-a~~g~~l~~~~  133 (181)
                      ..|++.     ++.|.+.+++ ++|+++++|||++||++.++++.+.+   +|++++++|||||++++ |++|+||++.+
T Consensus        82 ~~~~~~~~~~~~~~i~~~l~~g~~Vv~l~~GDP~~ys~~~~l~~~l~~~~~~~i~vevVPGISS~~aaaA~lg~pl~~~~  161 (253)
T PRK08284         82 DDWHAARAALYERLIAEELPDGGTGAFLVWGDPSLYDSTLRILERVRARGRVAFDYEVIPGITSVQALAARHRIPLNRIG  161 (253)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCcEEEEeCCCcchhhHHHHHHHHHHhhccCCCcEEEECChhHHHHHHHHcCCChhcCC
Confidence            122222     4556676666 79999999999999999999999875   48999999999999976 89999999988


Q ss_pred             ceeEEecc
Q 030179          134 ETVSIPFF  141 (181)
Q Consensus       134 ~~~~v~~~  141 (181)
                      +++.+++.
T Consensus       162 ~~l~ii~g  169 (253)
T PRK08284        162 EPVHITTG  169 (253)
T ss_pred             ceEEEEec
Confidence            88887643

>PRK10637 cysG siroheme synthase; Provisional

Probab=99.96  E-value=1.7e-28  Score=215.46  Aligned_cols=165  Identities=22%  Similarity=0.291  Sum_probs=120.6

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccc-cccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHcc
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSL-LSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQ   78 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~-l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~   78 (181)
                      +||+||+|||||++||++|+++|++||+|+++.+... +.+ ...+   ....+. ++...+. ...++++.+.+.+.++
T Consensus       217 ~l~iVG~GpGdp~lLTl~A~~~L~~ADvV~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~  291 (457)
T PRK10637        217 EVVLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMN-LVRR---DADRVFVGKRAGYH-CVPQEEINQILLREAQ  291 (457)
T ss_pred             EEEEEEeCCCChHHHHHHHHHHHHcCCEEEECCCCCHHHHh-hccc---CCEEEEcCCCCCCC-CcCHHHHHHHHHHHHh
Confidence            5899999999999999999999999999999765421 100 0000   000010 1111010 1124566677776665


Q ss_pred             C-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHH
Q 030179           79 E-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKR  156 (181)
Q Consensus        79 ~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~  156 (181)
                      + ++|++|++|||++||++.++++++.+.|++++++|||||+|++ |++|+||+.++.+.++.+.+.|+++....+  +.
T Consensus       292 ~G~~Vv~L~sGDP~~yg~~~~l~~~l~~~gi~vevVPGISS~~aAaA~~g~pl~~~~~~~~~~vis~h~~~~~~~~--~~  369 (457)
T PRK10637        292 KGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHLKTGGELD--WE  369 (457)
T ss_pred             CCCEEEEEeCCCccccccHHHHHHHHHhCCCCEEEECCHhHHHHHHHHcCCCcccCCceeeEEEEeCccCCCCccC--HH
Confidence            5 7899999999999999999999998889999999999999975 899999999887666666788877543221  45


Q ss_pred             HhcCCCceEEEEccee
Q 030179          157 NRSLGLHTLCLLGGVT  172 (181)
Q Consensus       157 ~~~~~~~tlvlld~~~  172 (181)
                      ++..+.+|+||++...
T Consensus       370 ~l~~~~~t~Vl~~~~~  385 (457)
T PRK10637        370 NLAAEKQTLVFYMGLN  385 (457)
T ss_pred             HHhCCCCeEEEECCHh
Confidence            5667789999986543

>PRK07168 bifunctional uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase; Reviewed

Probab=99.96  E-value=1.8e-28  Score=215.56  Aligned_cols=161  Identities=20%  Similarity=0.179  Sum_probs=114.0

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccc-cccccccchhhhhHHH-hCCccccCChHH-HHHHHHHHHHHc
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSL-LSFGLSTDGLSTLEKL-YGKPIALADREM-VEEKADKILSES   77 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~-l~~g~~~~~l~~~~~~-~~~~~~~~~~~~-~~~~~~~i~~~~   77 (181)
                      +||+||+|||||++||+||+++|++||+|+|+...+. +.. ...+   ....+ .++...  +... .+++.+.+.+.+
T Consensus         4 ~V~lVGaGPGdp~LLTlrA~~~L~~ADVVvydrlv~~~~l~-~~~~---~~~~i~~gk~~~--~~~~~qe~i~~~l~~~a   77 (474)
T PRK07168          4 YVYLVGAGPGDEGLITKKAIECLKRADIVLYDRLLNPFFLS-YTKQ---TCELMYCGKMPK--NHIMRQEMINAHLLQFA   77 (474)
T ss_pred             EEEEEEECCCChHHHHHHHHHHHHhCCEEEEeCcCCHHHHh-hcCC---CcEEEeccCcCC--CccccHHHHHHHHHHHH
Confidence            4899999999999999999999999999999754321 100 0000   00000 111110  1111 123344556665


Q ss_pred             cC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHH
Q 030179           78 QE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIK  155 (181)
Q Consensus        78 ~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~  155 (181)
                      ++ ++|++|++|||++||++.++++++.+.|+++||+|||||++++ |++|+||++.+.+.++.+.+.|.++...-...+
T Consensus        78 ~~Gk~VvrL~~GDP~vfg~~~ee~~~l~~~gi~~eVVPGISS~~aaaA~aGiPlt~r~~~~s~~viT~h~~~~~~~~~~~  157 (474)
T PRK07168         78 KEGKIVVRLKGGDPSIFGRVGEEAETLAAANIPYEIVPGITSSIAASSYAGIPLTHRNYSNSVTLLTGHAKGPLTDHGKY  157 (474)
T ss_pred             hCCCEEEEEeCCCchHHhhHHHHHHHHHhCCCCEEEECChhHHHHHHHHcCCCCCCccccceEEEEccCcCCccccchhH
Confidence            55 7899999999999999999999999999999999999999975 899999999998888888898876421112234


Q ss_pred             HHhcCCCceEEEE
Q 030179          156 RNRSLGLHTLCLL  168 (181)
Q Consensus       156 ~~~~~~~~tlvll  168 (181)
                      ..+.. ..|+|||
T Consensus       158 ~~l~~-~~tlV~l  169 (474)
T PRK07168        158 NSSHN-SDTIAYY  169 (474)
T ss_pred             HHhcC-CCeEEEE
Confidence            44444 3577777

>TIGR02434 CobF precorrin-6A synthase (deacetylating)

Probab=99.95  E-value=1.1e-27  Score=195.13  Aligned_cols=139  Identities=22%  Similarity=0.281  Sum_probs=99.9

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhC---Cccc---cC---C-h-------
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG---KPIA---LA---D-R-------   63 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~---~~~~---~~---~-~-------   63 (181)
                      +||+||+||||||+||+||+++|++||+|+++.....-. ++..-..+.+..+..   +++.   +.   + .       
T Consensus         2 ~l~~VG~GPGDPeLLTlkA~r~L~~AdvV~~p~~~~~~~-~l~~~a~~i~~~~~~~~~~~i~~~~~pm~~~~~~~y~~~~   80 (249)
T TIGR02434         2 TILLIGIGAGDPEQLTLQAVDALNHADVFFVLDKGEQKS-DLVALRREICARYVTAPGYRIVEVDDPERDAGADDYRAAV   80 (249)
T ss_pred             EEEEEEeCCCChHHhHHHHHHHHHhCCEEEEECCCCCch-hHHHHHHHHHHHHhCCCCcEEEEecCCCcCCccchhhhhH
Confidence            589999999999999999999999999999975421100 000001123332221   1111   10   0 0       


Q ss_pred             HHHH-----HHHHHHHHHccC-CCEEEEecCCccccccHHHHHHHHHh---CCCcEEEECCccHHHHH-HHcCCCcccCC
Q 030179           64 EMVE-----EKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKK---LGIQVKAVHNASVMNAV-GICGLQLYRFG  133 (181)
Q Consensus        64 ~~~~-----~~~~~i~~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~---~g~~v~iiPGiSs~~a~-a~~g~~l~~~~  133 (181)
                      ..|+     ++++.|.+.+++ ++|++|++|||++||++.++.+++++   .+++++++|||||++++ |++|+||++.+
T Consensus        81 ~~~~~~~~~~~a~~i~~~~~~g~~Vv~L~~GDP~~yst~~~l~~~l~~~~~~~~~vevVPGISS~~aaaA~lg~pl~~~~  160 (249)
T TIGR02434        81 DDWHAQRADIWAQAIAEELGDDGTGAFLVWGDPSLYDSTLRILERLRALGGVPFDYEVIPGITSVQALTARHRIPLNRIG  160 (249)
T ss_pred             HHhhhhHHHHHHHHHHHHHhCCCcEEEEeCCCchHhhhHHHHHHHHHHhcCCCCCEEEECCHHHHHHHHHHhCCCcccCC
Confidence            1122     456677776666 79999999999999999999998876   47899999999999975 89999999988


Q ss_pred             ceeEEec
Q 030179          134 ETVSIPF  140 (181)
Q Consensus       134 ~~~~v~~  140 (181)
                      +.+.++.
T Consensus       161 ~~l~v~~  167 (249)
T TIGR02434       161 EPVQITT  167 (249)
T ss_pred             ceEEEEe
Confidence            7777654

This model identifies CobF in High GC gram positive, alphaproteobacteria and pseudomonas-related species.

>TIGR01466 cobJ_cbiH precorrin-3B C17-methyltransferase

Probab=99.95  E-value=1.7e-26  Score=187.04  Aligned_cols=120  Identities=23%  Similarity=0.282  Sum_probs=88.6

Q ss_pred             EEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC-
Q 030179            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE-   79 (181)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~-   79 (181)
                      ||+||+|||||++||++|+++|++||+|+++.+           +++.++.+. +++..........+..+.+.+.+++ 
T Consensus         1 l~iVG~GpG~~~~lT~~A~~~i~~AdvV~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   69 (239)
T TIGR01466         1 LYVVGIGPGAEELMTPEAKEALAEADVIVGYKT-----------YLDLIEDLIPGKEVVTSGMREEIARAELAIELAAEG   69 (239)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHHhCCEEEECcc-----------HHHHHHhhCCCCEEEeCCChHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999998642           222444332 2222111111112233334444444 


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHhCC--CcEEEECCccHHHHH-HHcCCCcccC
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKKLG--IQVKAVHNASVMNAV-GICGLQLYRF  132 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~~g--~~v~iiPGiSs~~a~-a~~g~~l~~~  132 (181)
                      ++|++|++|||++||++.++.+.+++.+  ++++++|||||+|++ |++|+||++.
T Consensus        70 ~~Vv~l~~GDP~~~~~~~~l~~~l~~~~~~~~v~viPGiSS~~aa~a~~g~p~~~~  125 (239)
T TIGR01466        70 RTVALVSSGDPGIYGMAALVFEALEKKGAEVDIEVIPGITAASAAASLLGAPLGHD  125 (239)
T ss_pred             CCEEEEecCCCcccccHHHHHHHHHhcCCCCCEEEeCCccHHHHHHHHcCCCcccc
Confidence            8999999999999999999999887654  599999999999975 9999999653

This model represents precorrin-3B C17-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-4 C11-methyltransferase, EC 2.1.1.133). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products. Members of this family may appear as fusion proteins with other enzymes of cobalamin biosynthesis.

>PRK05765 precorrin-3B C17-methyltransferase; Provisional

Probab=99.95  E-value=1.5e-26  Score=188.50  Aligned_cols=154  Identities=18%  Similarity=0.146  Sum_probs=104.8

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      |||+||+|||||++||++|+++|++||+|+++...           .+.+..+. +++....+........+.+.+.+++
T Consensus         3 ~v~iVG~GpGdp~~lT~ra~~~L~~AdvV~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~   71 (246)
T PRK05765          3 KLYIVGIGPGSKEQRTIKAQEAIEKSNVIIGYNTY-----------LRLISDLLDGKEVIGARMKEEIFRANTAIEKALE   71 (246)
T ss_pred             EEEEEEcCCCChHHhhHHHHHHHHhCCEEEEccCH-----------HHHHHHhcCCCEEecCCchHHHHHHHHHHHHHHC
Confidence            68999999999999999999999999999986432           11232222 2222211111111122445555555


Q ss_pred             -CCEEEEecCCccccccHHHHHHHHHhCCC--cEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCC--CCCChHHH
Q 030179           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGI--QVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW--RPGSFYEK  153 (181)
Q Consensus        80 -~~V~~l~~GDP~~~~~~~~l~~~~~~~g~--~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~--~~~~~~~~  153 (181)
                       ++|++|++|||++|+++.++.+.+++.|+  +++++|||||++++ |++|+||++..     .+.+.|.  .|......
T Consensus        72 g~~Vv~l~~GDP~i~~~~~~~~~~l~~~~~~~~veviPGiSs~~aa~a~~g~pl~~~~-----~~~s~~~~~~p~~~~~~  146 (246)
T PRK05765         72 GNIVALVSSGDPQVYGMAGLVFELISRRKLDVDVEVIPGVTAALAAAARLGSPLSLDF-----VVISLSDLLIPREEILH  146 (246)
T ss_pred             CCcEEEEeCCCchhhhhHHHHHHHHHhcCCCCCEEEeCCHHHHHHHHHHhCCCCcCCc-----EEEEcCCCCCChHHHHH
Confidence             79999999999999999999999988776  79999999999975 89999996432     2233342  33221111


Q ss_pred             HHHHhcCCCceEEEEcc
Q 030179          154 IKRNRSLGLHTLCLLGG  170 (181)
Q Consensus       154 i~~~~~~~~~tlvlld~  170 (181)
                      -+..+.....|++|++-
T Consensus       147 ~l~~~~~~~~~ivly~~  163 (246)
T PRK05765        147 RVTKAAEADFVIVFYNP  163 (246)
T ss_pred             HHHHHhcCCeEEEEEcc
Confidence            23344566688888773

>PRK15478 cbiH cobalt-precorrin-3B C(17)-methyltransferase; Provisional

Probab=99.95  E-value=1.2e-26  Score=188.43  Aligned_cols=155  Identities=18%  Similarity=0.185  Sum_probs=103.1

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      |||+||+|||||++||+||+++|++||+|+++...           .+.+..+. ++...........+..+.+++.+++
T Consensus         1 ml~~VG~GPGdp~lLTlrA~~~L~~ADvVv~~~~~-----------~~lv~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~   69 (241)
T PRK15478          1 MLSVIGIGPGSQAMMTMEAIEALQAAEIVVGYKTY-----------THLVKAFTGDKQVIKTGMCKEIERCQAAIELAQA   69 (241)
T ss_pred             CEEEEEcCCCChHHHHHHHHHHHHcCCEEEEcCcH-----------HHHHHhhcCCCEEEECCCchHHHHHHHHHHHHHC
Confidence            89999999999999999999999999999986431           11222221 2222111111112333445555555


Q ss_pred             -CCEEEEecCCccccccHHHHHHHHHhCC--CcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHH
Q 030179           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLG--IQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIK  155 (181)
Q Consensus        80 -~~V~~l~~GDP~~~~~~~~l~~~~~~~g--~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~  155 (181)
                       ++|++|++|||++|+++.++.+.+.+.+  ++++++|||||++++ |++|+||++.....++.   ....|....+.-+
T Consensus        70 g~~Vv~L~sGDP~~~g~~~~~~~~l~~~~~~~~veviPGiSs~~aaaa~~g~plt~~~~~~s~~---~~~~~~~~~~~~~  146 (241)
T PRK15478         70 GHNVALISSGDAGIYGMAGLVLELVSKQKLDVEVRLIPGMTASIAAASLLGAPLMHDFCHISLS---DLLTPWPVIEKRI  146 (241)
T ss_pred             CCeEEEEECCCCCcchhHHHHHHHHHhcCCCCcEEEeCCHHHHHHHHHHhCCCcccCcceeecc---cCCCCcHHHHHhH
Confidence             8999999999999999999999887654  669999999999975 89999997654433331   1111211112223


Q ss_pred             HHhcCCCceEEEEc
Q 030179          156 RNRSLGLHTLCLLG  169 (181)
Q Consensus       156 ~~~~~~~~tlvlld  169 (181)
                      ..+.....|++|+.
T Consensus       147 ~a~~~~~~tlvlym  160 (241)
T PRK15478        147 VAAGEADFVICFYN  160 (241)
T ss_pred             HHHhcCCeEEEEEC
Confidence            33445556888864

>PRK05991 precorrin-3B C17-methyltransferase; Provisional

Probab=99.95  E-value=1.6e-26  Score=188.64  Aligned_cols=121  Identities=21%  Similarity=0.225  Sum_probs=87.9

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCC-ccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGK-PIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      +||+||+|||||++||++|+++|++||+|+++..           .++.+...... .....+++..++..+.+....++
T Consensus         4 ~l~iVG~GpG~p~~lT~~a~~~l~~AdvV~~~~~-----------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   72 (250)
T PRK05991          4 RLFVIGTGPGNPEQMTPEALAAVEAATDFFGYGP-----------YLDRLPLRADQLRHASDNREELDRAGAALAMAAAG   72 (250)
T ss_pred             eEEEEEeCCCChhhhhHHHHHHHHhCCEEEEcHH-----------HHHhhhccccccccCCCCHHHHHHHHHHHHHHHCC
Confidence            5899999999999999999999999999998532           11122110010 11112222333333333333455


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHh-----CCCcEEEECCccHHHHH-HHcCCCcccC
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKK-----LGIQVKAVHNASVMNAV-GICGLQLYRF  132 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~-----~g~~v~iiPGiSs~~a~-a~~g~~l~~~  132 (181)
                      ++|++|++|||++|+++.++.+.+++     .+++++++|||||+|++ |++|+||.+.
T Consensus        73 ~~Vv~l~~GDP~~~~~~~~l~~~~~~g~~~~~~~~v~vvPGISS~~aa~a~~g~p~~~~  131 (250)
T PRK05991         73 ANVCVVSGGDPGVFAMAAAVCEAIENGPAAWRAVDLTIVPGVTAMLAVAARIGAPLGHD  131 (250)
T ss_pred             CeEEEEeCCCchhhhhHHHHHHHHHhcccccCCceEEEECChHHHHHHHHHhCCCCCCC
Confidence            89999999999999999999888874     46899999999999975 9999999754

>TIGR02467 CbiE precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit

Probab=99.94  E-value=1.3e-26  Score=183.78  Aligned_cols=146  Identities=20%  Similarity=0.170  Sum_probs=105.7

Q ss_pred             EEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCC-ccccCChHHHHHHHHHHHHHccCCCE
Q 030179            4 IIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGK-PIALADREMVEEKADKILSESQESNV   82 (181)
Q Consensus         4 iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~V   82 (181)
                      +||+|||||++||++|+++|++||+|+++.           +.++.+..+.++ .........+++..+.+.+.+++++|
T Consensus         1 iVG~GpG~~~~lT~~a~~~L~~advv~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~v   69 (204)
T TIGR02467         1 VVGIGPGGPELLTPAAIEAIRKADLVVGGE-----------RHLELLAELIGEKREIILTYKDLDELLEFIAATRKEKRV   69 (204)
T ss_pred             CEEeCCCChhhcCHHHHHHHHhCCEEEech-----------hhHHHHhhhcCCceEeccCcCCHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999863           223344433322 11111122466777777766556799


Q ss_pred             EEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHhcCC
Q 030179           83 AFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLG  161 (181)
Q Consensus        83 ~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~  161 (181)
                      +++++|||++|+++.++.+.+.+  .+++++|||||+|++ |++|+||++.      .+.+.|+++...  ..+..+..+
T Consensus        70 v~l~~GDP~~~~~~~~l~~~~~~--~~v~iiPGiSs~~~a~a~~g~~l~~~------~~is~~~~~~~~--~~~~~l~~~  139 (204)
T TIGR02467        70 VVLASGDPLFYGIGRTLAERLGK--ERLEIIPGISSVQYAFARLGLPWQDA------VVISLHGRELDE--LLLALLRGH  139 (204)
T ss_pred             EEEecCCCcccccHHHHHHhCCC--CcEEEeCChHHHHHHHHHcCCChhhC------eEEEeeCCCCcH--HHHHHHhcC
Confidence            99999999999999999888754  379999999999975 9999999753      234566665321  134556666


Q ss_pred             CceEEEEcc
Q 030179          162 LHTLCLLGG  170 (181)
Q Consensus       162 ~~tlvlld~  170 (181)
                      ..+++|++.
T Consensus       140 ~~~vvl~~~  148 (204)
T TIGR02467       140 RKVAVLTDP  148 (204)
T ss_pred             CcEEEEeCC
Confidence            677777754

This model recognizes the CbiE methylase which is responsible, in part (along with CbiT), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiT subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional

Probab=99.94  E-value=3.8e-26  Score=189.46  Aligned_cols=159  Identities=22%  Similarity=0.250  Sum_probs=115.4

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHH-hCCccc-cCChHHHHHHHHHHHHHcc
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKPIA-LADREMVEEKADKILSESQ   78 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~-~~~~~~-~~~~~~~~~~~~~i~~~~~   78 (181)
                      +||+||+||||+++||+||+++|++||+|+|+++..      ..+   .++.+ ..+++. +.+ ..+++.++.+.+.++
T Consensus        13 ~Ly~VgtgiGn~edITlRAl~~L~~aDvI~~edtr~------t~~---ll~~~~i~~~~~~~~~-~~~~~~~~~i~~~l~   82 (287)
T PRK14994         13 QLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRH------TGL---LLQHFAINARLFALHD-HNEQQKAETLLAKLQ   82 (287)
T ss_pred             eEEEEeCCCCChHHhhHHHHHHHHhCCEEEEeCCcc------hHH---HHhhcCCCCEEEEccC-CCHHHHHHHHHHHHH
Confidence            589999999999999999999999999999987631      111   11111 122322 222 346777788888776


Q ss_pred             C-CCEEEEe-cCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHH
Q 030179           79 E-SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIK  155 (181)
Q Consensus        79 ~-~~V~~l~-~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~  155 (181)
                      + ++|++++ .|||++|+++.++++.+++.|+++++|||+||++++ +++|+|.+.|- -..+++..  .   ......+
T Consensus        83 ~G~~ValvSdaGdP~I~dpg~~Lv~~~~~~gi~v~vIPGiSA~~aA~a~sG~~~~~f~-f~Gflp~~--~---~~r~~~L  156 (287)
T PRK14994         83 EGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFC-YEGFLPAK--S---KGRRDAL  156 (287)
T ss_pred             CCCeEEEEccCCCCceeCCHHHHHHHHHHCCCCEEEeCCHHHHHHHHHHcCCCCCcce-EeEECCCC--C---chHHHHH
Confidence            6 7999998 999999999999999999999999999999999875 89999954420 00122211  1   1123345


Q ss_pred             HHhcCCCceEEEEcceeeee
Q 030179          156 RNRSLGLHTLCLLGGVTLCV  175 (181)
Q Consensus       156 ~~~~~~~~tlvlld~~~~~~  175 (181)
                      ..+.....|+|||+...|+.
T Consensus       157 ~~l~~~~~t~V~yesp~R~~  176 (287)
T PRK14994        157 KALEAEPRTLIFYESTHRLL  176 (287)
T ss_pred             HHHhcCCCeEEEEEEChhHH
Confidence            55666679999999866653

>COG1010 CobJ Precorrin-3B methylase [Coenzyme metabolism]

Probab=99.94  E-value=6.5e-26  Score=179.87  Aligned_cols=152  Identities=20%  Similarity=0.234  Sum_probs=110.8

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHHHHccC-
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQE-   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-   79 (181)
                      |||+||+|||+++++|++|.++|++||+|++-.  .+         ++.++...++++.-.+...--+.+++.++.+++ 
T Consensus         4 ~L~VVGiGPG~~~~mT~~A~~al~~ad~ivGY~--~Y---------~d~i~l~~~k~v~~s~m~~Ei~Ra~~AielA~~G   72 (249)
T COG1010           4 KLYVVGIGPGDPELMTPEARRALEEADVIVGYT--TY---------LDLIELRPGKEVIRSGMREEIERAKEAIELAAEG   72 (249)
T ss_pred             eEEEEEeCCCChhhCCHHHHHHHHhCCEEEecH--HH---------HHHHhcCCCCEEEeCCcHhHHHHHHHHHHHHhcC
Confidence            699999999999999999999999999999742  11         112331123444322222222456667777777 


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHhC---CCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHH
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKKL---GIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIK  155 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~~---g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~  155 (181)
                      ++|+++++|||.+|+.....++.+.+.   +++++|+||||+.+++ |++|.|+.+..   .++..|++..|   |+.|.
T Consensus        73 ~~ValVSsGDpgVYgMA~lv~E~~~~~~~~~v~veVvPGvTA~~aaAa~lGAPL~hDF---~~ISLSDlLtP---we~Ie  146 (249)
T COG1010          73 RDVALVSSGDPGVYGMAGLVLEAAEEEGWYDVDVEVVPGVTAALAAAARLGAPLGHDF---CVISLSDLLTP---WEVIE  146 (249)
T ss_pred             CeEEEEeCCCccHHHhHHHHHHHHHhcCCCCccEEEeCChHHHHHHHHHhCCCcccce---EEEEhHhcCCc---HHHHH
Confidence            799999999999999999888888754   4899999999998875 89999998865   44455888777   77777


Q ss_pred             HHhc---CCCceEEEEc
Q 030179          156 RNRS---LGLHTLCLLG  169 (181)
Q Consensus       156 ~~~~---~~~~tlvlld  169 (181)
                      +++.   ...-.++|+.
T Consensus       147 kRl~aAA~adfVi~~YN  163 (249)
T COG1010         147 KRLRAAAEADFVIALYN  163 (249)
T ss_pred             HHHHHHhhCCEEEEEEC
Confidence            6543   2224455553

>KOG1527 consensus Uroporphyrin III methyltransferase [Coenzyme transport and metabolism]

Probab=99.88  E-value=1.1e-22  Score=169.35  Aligned_cols=169  Identities=18%  Similarity=0.210  Sum_probs=124.2

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHH----HhCCccccCCh-HHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEK----LYGKPIALADR-EMVEEKADKILS   75 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~----~~~~~~~~~~~-~~~~~~~~~i~~   75 (181)
                      .||+||.|||+|++||++|+++|++||+++++..++.       ..|+.+.+    ++.++.. .+. ...++.-+..++
T Consensus       257 ~i~LvGsGPGsp~lLT~~A~~~I~sAD~~LaDkLVp~-------avL~Lipp~t~lfia~Kfp-Gna~raQ~Elh~~~l~  328 (506)
T KOG1527|consen  257 DIYLVGSGPGSPELLTLKAVRVIQSADLLLADKLVPN-------AVLELIPPDTRLFIAGKFP-GNASRAQEELHELLLN  328 (506)
T ss_pred             cEEEEccCCCChhheeHHHHHHHhhcceehhhhcccH-------HHHhhcCCCCceEEeecCC-CchhHHHHHHHHHHHH
Confidence            4899999999999999999999999999999865431       11111111    1111211 111 223455566666


Q ss_pred             HccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHH
Q 030179           76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEK  153 (181)
Q Consensus        76 ~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~  153 (181)
                      .+.. -.|++|+-|||++|+++.+....++++|+...++|||||..++ +.+|+|+++.+..-.+.+++++++-...  .
T Consensus       329 ~l~~G~~VVRLKqGDPyifGRGGEE~~Ff~qhGy~p~ViPGIssal~~~~~agIP~ThRgvAdqvl~cTGtgrKG~~--p  406 (506)
T KOG1527|consen  329 FLEAGATVVRLKQGDPYIFGRGGEEMDFFQQHGYRPQVIPGISSALGIAAEAGIPLTHRGVADQVLFCTGTGRKGGT--P  406 (506)
T ss_pred             HHhCCCEEEEecCCCceeecCCchhhhhHHhCCceeEeccchhhhhhhhHhcCCCcccccccceEEEEeccCCCCCC--C
Confidence            6666 4899999999999999999999999999999999999997765 7899999999999999999999874331  1


Q ss_pred             HHHHhcCCCceEEEEcce------eeeeccCC
Q 030179          154 IKRNRSLGLHTLCLLGGV------TLCVDHSL  179 (181)
Q Consensus       154 i~~~~~~~~~tlvlld~~------~~~~~~~~  179 (181)
                      .....-....|.++|.+.      |-|+|||+
T Consensus       407 ~ip~fvp~~TtVflMaLhrl~~L~q~L~~hGw  438 (506)
T KOG1527|consen  407 AIPAFVPDTTTVFLMALHRLPSLAQKLMDHGW  438 (506)
T ss_pred             CccccCCCceeEeeehhcchHHHHHHHHhcCC
Confidence            233344445666666554      45788875

>COG0313 Predicted methyltransferases [General function prediction only]

Probab=99.77  E-value=7.5e-18  Score=137.31  Aligned_cols=158  Identities=25%  Similarity=0.343  Sum_probs=119.3

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHH-hCCcc-ccCChHHHHHHHHHHHHHcc
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKPI-ALADREMVEEKADKILSESQ   78 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~-~~~~~-~~~~~~~~~~~~~~i~~~~~   78 (181)
                      ++|+|++..||.+.||.||+++|++||+|++++...      ...   .+..+ +.++. .+++. +.++....+++.++
T Consensus         6 ~LYlV~TPIGNl~Dit~Ral~~L~~~D~iaaEDTR~------t~~---LL~~~~I~~~~is~h~h-ne~~~~~~li~~l~   75 (275)
T COG0313           6 TLYLVPTPIGNLADITLRALEVLKEVDVIAAEDTRV------TRK---LLSHLGIKTPLISYHEH-NEKEKLPKLIPLLK   75 (275)
T ss_pred             eEEEeCCCCCChHhcCHHHHHHHhhCCEEEEeccHH------HHH---HHHHhCCCCceecccCC-cHHHHHHHHHHHHh
Confidence            489999999999999999999999999999986531      111   22322 12222 22222 23445566777777


Q ss_pred             C-CCEEEEe-cCCccccccHHHHHHHHHhCCCcEEEECCccHHH-HHHHcCCCcccCCceeEEecccCCCCCCCh--HHH
Q 030179           79 E-SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN-AVGICGLQLYRFGETVSIPFFTETWRPGSF--YEK  153 (181)
Q Consensus        79 ~-~~V~~l~-~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~-a~a~~g~~l~~~~~~~~v~~~~~~~~~~~~--~~~  153 (181)
                      + ++|++++ .|-|++.+++..|++++++.|++|+++||.||+. |++.+|+|-+.|        .-.++.|.+.  ...
T Consensus        76 ~g~~valVSDAG~P~ISDPG~~LV~~a~~~gi~V~~lPG~sA~~tAL~~SGl~~~~F--------~F~GFLP~k~~~R~~  147 (275)
T COG0313          76 KGKSVALVSDAGTPLISDPGYELVRAAREAGIRVVPLPGPSALITALSASGLPSQRF--------LFEGFLPRKSKERRK  147 (275)
T ss_pred             cCCeEEEEecCCCCcccCccHHHHHHHHHcCCcEEecCCccHHHHHHHHcCCCCCCe--------eEeccCCCCccHHHH
Confidence            7 5999998 9999999999999999999999999999999976 559999998874        1245555443  344


Q ss_pred             HHHHhcCCCceEEEEcceeeeec
Q 030179          154 IKRNRSLGLHTLCLLGGVTLCVD  176 (181)
Q Consensus       154 i~~~~~~~~~tlvlld~~~~~~~  176 (181)
                      .++.+.....|+||++-.+|+.+
T Consensus       148 ~l~~l~~~~~t~IfyEsphRl~~  170 (275)
T COG0313         148 RLEALANEPRTLIFYESPHRLLA  170 (275)
T ss_pred             HHHHHHhcCCeEEEEecchhHHH
Confidence            56667777789999999888753

>TIGR00096 probable S-adenosylmethionine-dependent methyltransferase, YraL family

Probab=99.74  E-value=2.7e-17  Score=135.75  Aligned_cols=159  Identities=21%  Similarity=0.189  Sum_probs=116.5

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHH-hCCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      |+|+|++..||-+.+|+||+++|++||+|+++++...      +.   .+..+ +.++.......+.++..+.+.+.++.
T Consensus         1 mLyvv~TPIGNl~Dit~Ral~~L~~~d~i~~EDTR~t------~k---LL~~~~I~~~~~~~~~hn~~~~~~~l~~~l~~   71 (276)
T TIGR00096         1 LLYVVTTPIGNLEDITRRALELLACVDLFAEEDTRTS------KL---LLHLGIIATPKAFHIDNEFQEKQNLLAAKLEI   71 (276)
T ss_pred             CEEEECCCCcCHHHHhHHHHHHHHhCCEEEecCchhH------HH---HHHhcCCCCceEEEecccHhHHHHHHHHHHHc
Confidence            8999999999999999999999999999999876311      11   12211 12232221122223344555565555


Q ss_pred             -CCEEEEe-cCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCCh--HHHH
Q 030179           80 -SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF--YEKI  154 (181)
Q Consensus        80 -~~V~~l~-~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~--~~~i  154 (181)
                       ++|++++ .|-|++.+++..+++.+.+.|+++.++||.|++.++ +.+|.+-..|      .  -.++.|.+.  .+..
T Consensus        72 g~~valvSDAG~P~ISDPG~~LV~~~~~~~i~v~~ipG~sA~~~Al~~SG~~~~~f------~--F~GFlp~k~~~r~~~  143 (276)
T TIGR00096        72 GNNIAVSSDAGPPLISDPGHLLVACREKANIIVVPLPGAAALTAALCASGPATDRF------F--FGGFLPKKSKRRQAL  143 (276)
T ss_pred             CCcEEEEecCCCCCcCCccHHHHHHHHHCCCeEEcCChHHHHHHHHHhcCCCCCce------E--EeeeCCCChHHHHHH
Confidence             7899998 999999999999999999999999999999998765 8899887653      1  133444332  4456


Q ss_pred             HHHhcCCCceEEEEcceeeeec
Q 030179          155 KRNRSLGLHTLCLLGGVTLCVD  176 (181)
Q Consensus       155 ~~~~~~~~~tlvlld~~~~~~~  176 (181)
                      ++.+.....|+||++..+|+.+
T Consensus       144 l~~l~~~~~t~ifyEsp~Rl~~  165 (276)
T TIGR00096       144 KAYIAEERTTVFFYESHHRLLT  165 (276)
T ss_pred             HHHHhCCCCeEEEEECcHhHHH
Confidence            6777788899999999988753

No member of this family is characterized, but Pfam model pfam00590 (tetrapyrrole methylase) demonstrates homology between this family and its other members, which include several methylases for the tetrapyrrole class of compound, as well as the enzyme diphthine synthase.

>COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only]

Probab=99.38  E-value=4.5e-12  Score=105.95  Aligned_cols=130  Identities=20%  Similarity=0.351  Sum_probs=97.9

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccc----cc-cccccchhhhhHHHhCCccccCChHHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSL----LS-FGLSTDGLSTLEKLYGKPIALADREMVEEKADKILS   75 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~----l~-~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~   75 (181)
                      ||++||+|+|+.+.||+...++|+++|-+++......    +. .|+..+   .++..+.+.-.|  ...|+.++..+.+
T Consensus         4 ~ItvVGLG~g~~d~L~lGi~k~lknqd~ly~RTkdHPviE~l~~e~~~f~---~fD~iYE~heqF--e~VYd~I~~~Lve   78 (488)
T COG3956           4 TITVVGLGAGDKDQLTLGIYKLLKNQDNLYVRTKDHPVIEELDEEGIKFS---FFDDIYETHEQF--EAVYDFIAADLVE   78 (488)
T ss_pred             eEEEEeeCCCchhhcchHHHHHHhccceEEEecCCCchHHHHHhhcceee---ehhHHHhhhhhH--HHHHHHHHHHHHH
Confidence            6899999999999999999999999999998654311    21 122222   333333222222  3467888888999


Q ss_pred             HccCCCEEEEecCCccccccHHHHHH-HHHhCCCcEEEECCccHHHHH-HHcCCCcccCCce
Q 030179           76 ESQESNVAFLVVGDPFGATTHTDLVV-RAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGET  135 (181)
Q Consensus        76 ~~~~~~V~~l~~GDP~~~~~~~~l~~-~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~  135 (181)
                      .++++++++.++|+|++..+...++. +.++.++.|.|+||.|.+.+. ..+.+...++-..
T Consensus        79 aAkekdIvYAVPGHP~VAEktVqlL~e~~ek~ni~Vkilgg~SFiD~~fealkiDPveG~q~  140 (488)
T COG3956          79 AAKEKDIVYAVPGHPLVAEKTVQLLIEACEKENIKVKILGGQSFIDALFEALKIDPVEGFQI  140 (488)
T ss_pred             hhcccceEEecCCCchhHHHHHHHHHHHHhccCceEEEeCcchhHHHHHHHhcCCcccCceE
Confidence            88889999999999999988777764 456678999999999999874 8888887765433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	181
3i4t_A	292	Crystal Structure Of Putative Diphthine Synthase Fr		1e-54
2dv4_A	265	Crystal Structure Of Leu65 To Gln Mutant Of Diphthi		6e-38
2ehc_A	265	Crystal Structure Of Asn69 To Lys Mutant Of Diphthi		8e-38
2dv3_A	265	Crystal Structure Of Leu65 To Arg Mutant Of Diphthi		1e-37
2dv5_A	265	Crystal Structure Of Leu65 To Ala Mutant Of Diphthi		1e-37
2eh2_A	265	Mutant V18m Structure Of Ph0725 From Pyrococcus Hor		2e-37
2egb_A	265	Crystal Structure Of Glu140 To Asn Mutant Of Diphth		2e-37
2pb5_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-37
2emr_A	265	Mutant L65m Structure Of Ph0725 From Pyrococcus Hor		2e-37
2p5f_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-37
2p9d_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-37
2pck_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-37
2eeq_A	265	Mutant Y29m Structure Of Ph0725 From Pyrococcus Hor		2e-37
2ek2_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-37
2en5_A	265	Mutant R262h Structure Of Ph0725 From Pyrococcus Ho		2e-37
2hux_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-37
2ejz_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-37
2ed3_A	265	Mutant I127m Structure Of Ph0725 From Pyrococcus Ho		2e-37
2eni_A	265	Mutant F197m Structure Of Ph0725 From Pyrococcus Ho		2e-37
2pch_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-37
2p6i_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-37
2e8h_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-37
2e08_A	265	Crystal Structure Of Glu140 To Lys Mutant Of Diphth		3e-37
2pcg_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-37
2el3_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		3e-37
2el2_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		3e-37
2eka_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		3e-37
2eh5_A	265	Mutant L184m Structure Of Ph0725 From Pyrococcus Ho		3e-37
2egs_A	265	Crystal Structure Of Leu261 To Met Mutant Of Diphth		3e-37
2e17_A	265	Crystal Structure Of Arg173 To Ala Mutant Of Diphth		3e-37
2hr8_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-37
2dxw_A	265	Crystal Structure Of Glu54 To Lys Mutant Of Diphthi		3e-37
2e15_A	265	Crystal Structure Of Arg173 To Asn Mutant Of Diphth		3e-37
2dv7_A	265	Crystal Structure Of Lys187 To Arg Mutant Of Diphth		3e-37
2e4n_A	265	Mutant V251m Structure Of Ph0725 From Pyrococcus Ho		3e-37
2p5c_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-37
2egl_A	265	Crystal Structure Of Glu171 To Lys Mutant Of Diphth		3e-37
2dsi_A	265	Crystal Structure Of Glu171 To Arg Mutant Of Diphth		3e-37
1wng_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		3e-37
2owg_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-37
2e4r_A	265	Mutant I253m Structure Of Ph0725 From Pyrococcus Ho		3e-37
2e16_A	265	Crystal Structure Of Glu140 To Arg Mutant Of Diphth		3e-37
2pb6_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-37
2owu_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-37
2ehl_A	265	Crystal Structure Of Thr146 To Arg Mutant Of Diphth		3e-37
2dxv_A	265	Crystal Structure Of Glu54 To His Mutant Of Diphthi		3e-37
2eh4_A	265	Mutant T146m Structure Of Ph0725 From Pyrococcus Ho		3e-37
2e7r_A	265	Crystal Structure Of Glu54 To Arg Mutant Of Diphthi		3e-37
2dxx_A	265	Crystal Structure Of Asn142 To Glu Mutant Of Diphth		4e-37
2hut_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		4e-37
2pcm_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		4e-37
2pca_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		4e-37
2eld_A	265	Mutant L160m Structure Of Ph0725 From Pyrococcus Ho		4e-37
2el1_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		4e-37
2el0_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		4e-37
2ek7_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		4e-37
2ek4_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		4e-37
2ek3_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		4e-37
2ejk_A	265	Mutant L38m Structure Of Ph0725 From Pyrococcus Hor		4e-37
2huq_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		4e-37
2e07_A	265	Crystal Structure Of Asp79 To Glu Mutant Of Diphthi		4e-37
2p6k_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		4e-37
2z6r_A	265	Crystal Structure Of Lys49 To Arg Mutant Of Diphthi		5e-37
2dsg_A	265	Crystal Structure Of Lys26 To Arg Mutant Of Diphthi		5e-37
2ele_A	265	Mutant V18c Structure Of Ph0725 From Pyrococcus Hor		6e-37
2e8s_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		6e-37
2pb4_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		6e-37
2owv_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		6e-37
1vce_A	265	Crystal Structure Of Project Id Ph0725 From Pyrococ		7e-37
2ejj_A	265	Mutant K129m Structure Of Ph0725 From Pyrococcus Ho		7e-37
2e8q_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		7e-37
2huv_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		1e-36
2ed5_A	265	Mutant S147m Structure Of Ph0725 From Pyrococcus Ho		1e-36
2e8r_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		1e-36
2dsh_A	265	Crystal Structure Of Lys26 To Tyr Mutant Of Diphthi		1e-36
2emu_A	265	Mutant L21h Structure Of Ph0725 From Pyrococcus Hor		2e-36
2p6d_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-36
2p2x_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-36
2owf_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		7e-36
1vhv_A	268	Crystal Structure Of Diphthine Synthase Length = 26		1e-25
1wde_A	294	Crystal Structure Of The Conserved Hypothetical Pro		7e-17

>pdb|3I4T|A Chain A, Crystal Structure Of Putative Diphthine Synthase From Entamoeba Histolytica Length = 292

Iteration: 1
 Score =  208 bits (530), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 98/168 (58%), Positives = 130/168 (77%), Gaps = 5/168 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGL DE+DIT+RGLEAVK CD V++E YT++L   ++      LE+ YGK + +
Sbjct: 22  MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAILQCDVAK-----LEEFYGKKVII 76
Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            DR++VE +AD+IL  ++  NVA LVVGD +GATTH+D+ VR +K+GI+VK +HNAS+MN
Sbjct: 77  GDRDLVETEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMN 136
Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           A+G  GLQLYRFG+TVS+ F++E WRP S+Y KIK NR   +HTL LL
Sbjct: 137 AIGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHTLVLL 184

>pdb|2DV4|A Chain A, Crystal Structure Of Leu65 To Gln Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  153 bits (386), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 111/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE+  + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVEQNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EHC|A Chain A, Crystal Structure Of Asn69 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  152 bits (385), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 80/169 (47%), Positives = 111/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   +KI L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFEKIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2DV3|A Chain A, Crystal Structure Of Leu65 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  152 bits (383), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVERNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2DV5|A Chain A, Crystal Structure Of Leu65 To Ala Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  152 bits (383), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVEANFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EH2|A Chain A, Mutant V18m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (382), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITMKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EGB|A Chain A, Crystal Structure Of Glu140 To Asn Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  151 bits (382), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPNGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2PB5|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (382), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPMAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EMR|A Chain A, Mutant L65m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (382), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVEMNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2P5F|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 111/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG+++++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSMTVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2P9D|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  MSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2PCK|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EEQ|A Chain A, Mutant Y29m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDMVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EK2|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (E140m) Length = 265

Iteration: 1
 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPMGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EN5|A Chain A, Mutant R262h Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2HUX|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EJZ|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (y11m) Length = 265

Iteration: 1
 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLMDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2ED3|A Chain A, Mutant I127m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHMYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2ENI|A Chain A, Mutant F197m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2PCH|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLECAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2P6I|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2E8H|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLMFL 166

>pdb|2E08|A Chain A, Crystal Structure Of Glu140 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPKGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2PCG|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EL3|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L242m) Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EL2|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (l185m) Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EKA|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L202m) Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EH5|A Chain A, Mutant L184m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EGS|A Chain A, Crystal Structure Of Leu261 To Met Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2E17|A Chain A, Crystal Structure Of Arg173 To Ala Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2HR8|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2DXW|A Chain A, Crystal Structure Of Glu54 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKKIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2E15|A Chain A, Crystal Structure Of Arg173 To Asn Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2DV7|A Chain A, Crystal Structure Of Lys187 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2E4N|A Chain A, Mutant V251m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2P5C|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPMVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EGL|A Chain A, Crystal Structure Of Glu171 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2DSI|A Chain A, Crystal Structure Of Glu171 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|1WNG|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2OWG|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2E4R|A Chain A, Mutant I253m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2E16|A Chain A, Crystal Structure Of Glu140 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPRGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2PB6|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2OWU|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLMIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EHL|A Chain A, Crystal Structure Of Thr146 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPRSYYDVIKENAERGLHTLLFL 166

>pdb|2DXV|A Chain A, Crystal Structure Of Glu54 To His Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKHIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EH4|A Chain A, Mutant T146m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPMSYYDVIKENAERGLHTLLFL 166

>pdb|2E7R|A Chain A, Crystal Structure Of Glu54 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKRIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2DXX|A Chain A, Crystal Structure Of Asn142 To Glu Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGEWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2HUT|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKILSE-SQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I+   ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVMPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2PCM|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++K+ GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKMIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2PCA|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAF+  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFMTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2ELD|A Chain A, Mutant L160m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   G+HTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGMHTLLFL 166

>pdb|2EL1|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L44m) Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       +  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTMGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EL0|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L21m) Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++G+E  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGMEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EK7|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L163m) Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHT+  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTMLFL 166

>pdb|2EK4|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L8m) Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IG+GL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGMGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EK3|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L3m) Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           ++Y IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VMYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EJK|A Chain A, Mutant L38m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTS+++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSMMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2HUQ|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI G+ +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGMHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2E07|A Chain A, Crystal Structure Of Asp79 To Glu Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E+ VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENEVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2P6K|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVMYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2Z6R|A Chain A, Crystal Structure Of Lys49 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (378), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  +++L GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQRLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2DSG|A Chain A, Crystal Structure Of Lys26 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  150 bits (378), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  K+CD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKRCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2ELE|A Chain A, Mutant V18c Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (378), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT +GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITCKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2E8S|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  149 bits (377), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++  + +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSAMVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2PB4|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  149 bits (377), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG + ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGMSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2OWV|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  149 bits (377), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSMYDVIKENAERGLHTLLFL 166

>pdb|1VCE|A Chain A, Crystal Structure Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  149 bits (377), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL +       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLXA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EJJ|A Chain A, Mutant K129m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  149 bits (377), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYMFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2E8Q|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (K19m) Length = 265

Iteration: 1
 Score =  149 bits (377), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT+ GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVMGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2HUV|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  149 bits (375), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +R K+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRMKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2ED5|A Chain A, Mutant S147m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  149 bits (375), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P  +Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTMYYDVIKENAERGLHTLLFL 166

>pdb|2E8R|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  148 bits (374), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE   KCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAMKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2DSH|A Chain A, Crystal Structure Of Lys26 To Tyr Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  148 bits (374), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  K CD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKYCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2EMU|A Chain A, Mutant L21h Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  148 bits (374), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++G E  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGHEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2P6D|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GL   KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLMIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2P2X|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL + +FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIMKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>pdb|2OWF|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  146 bits (368), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +      P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNMFPTSYYDVIKENAERGLHTLLFL 166

>pdb|1VHV|A Chain A, Crystal Structure Of Diphthine Synthase Length = 268

Iteration: 1
 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 106/170 (62%), Gaps = 12/170 (7%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +L  +GLGL D +DI+++GLEAV++ D+VY+E YTS L   LS+  +   E+ +GK +  
Sbjct: 14  LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKL---LSS--IEEXEEFFGKRVVE 68
Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            +R  +EE + +++  ++  +V  LV GDP  ATTH+ + + A++ G++ + +H AS+  
Sbjct: 69  LERSDLEENSFRLIERAKSKSVVLLVPGDPXVATTHSAIKLEAERKGVKTRIIHGASIST 128
Query: 121 AV-GICGLQLYRFGETVSIPFFTETW-RPGSFYEKIKRNRSLGLHTLCLL 168
           AV G+ GL  YRFG++ ++     +W R  +    IK NRS+  HTL  L
Sbjct: 129 AVCGLTGLHNYRFGKSATV-----SWHRSQTPVNVIKANRSIDAHTLLFL 173

>pdb|1WDE|A Chain A, Crystal Structure Of The Conserved Hypothetical Protein Ape0931 From Aeropyrum Pernix K1 Length = 294

Iteration: 1
 Score = 83.2 bits (204), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 16  TLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILS 75
           TL  L+AV++ D VY+E+YT   S  L     S +E      +  A R  +EE++ +I+S
Sbjct: 23  TLEALDAVRRADVVYVESYTXPGSSWLYK---SVVEAAGEARVVEASRRDLEERSREIVS 79
Query: 76  ESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS-VMNAVGICGLQLYRFGE 134
            + ++ VA +  GDP  ATTH+ L   A + G+ V+ +   S V  A G   L  YRFG 
Sbjct: 80  RALDAVVAVVTAGDPXVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATXLSFYRFGG 139
Query: 135 TVSIPFFTETWR---PGSFYEKIKRNRSLGLHTLCLL 168
           TV++P     WR   P S   +I  N   GLHT  LL
Sbjct: 140 TVTLPG---PWRGVTPISVARRIYLNLCAGLHTTALL 173

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	181
3i4t_A	292	Diphthine synthase; niaid, ssgcid, infectious dise	2e-62
1wde_A	294	Probable diphthine synthase; structural genomics,	1e-61
2z6r_A	265	Diphthine synthase; methyltransferase, S-adenosyl-	1e-61
1vhv_A	268	Diphthine synthase; structural genomics, transfera	4e-60
2qbu_A	232	Precorrin-2 methyltransferase; HET: SAH; 2.10A {Me	7e-07
2bb3_A	221	Cobalamin biosynthesis precorrin-6Y methylase (CB;	1e-06
2npn_A	251	Putative cobalamin synthesis related protein; COBF	2e-06
3nd1_A	275	Precorrin-6A synthase/COBF protein; methyltransfer	9e-06
2e0n_A	259	Precorrin-2 C20-methyltransferase; cobalt-factor I	1e-05
3nut_A	251	Precorrin-3 methylase; vitamin B12 pathway, cobala	2e-04

>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica} Length = 292

 Score =  194 bits (493), Expect = 2e-62
 Identities = 98/168 (58%), Positives = 130/168 (77%), Gaps = 5/168 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGL DE+DIT+RGLEAVK CD V++E YT++L        ++ LE+ YGK + +
Sbjct: 22  MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAILQ-----CDVAKLEEFYGKKVII 76

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            DR++VE +AD+IL  ++  NVA LVVGD +GATTH+D+ VR +K+GI+VK +HNAS+MN
Sbjct: 77  GDRDLVETEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMN 136

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           A+G  GLQLYRFG+TVS+ F++E WRP S+Y KIK NR   +HTL LL
Sbjct: 137 AIGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHTLVLL 184

>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1 Length = 294

 Score =  191 bits (487), Expect = 1e-61
 Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 5/169 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
            L ++G G       TL  L+AV++ D VY+E+YT   S  L       +E      +  
Sbjct: 9   TLLLVGWGYAPG-MQTLEALDAVRRADVVYVESYTMPGSSWLYKS---VVEAAGEARVVE 64

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS-VM 119
           A R  +EE++ +I+S + ++ VA +  GDP  ATTH+ L   A + G+ V+ +   S V 
Sbjct: 65  ASRRDLEERSREIVSRALDAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQ 124

Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
            A G   L  YRFG TV++P       P S   +I  N   GLHT  LL
Sbjct: 125 AARGATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNLCAGLHTTALL 173

>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ... Length = 265

 Score =  191 bits (485), Expect = 1e-61
 Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  +++L GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMAG----TTLGRIQRLIGKEIRV 57

Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117

Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Length = 268

 Score =  187 bits (476), Expect = 4e-60
 Identities = 61/169 (36%), Positives = 103/169 (60%), Gaps = 10/169 (5%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +L  +GLGL D +DI+++GLEAV++ D+VY+E YTS L        +  +E+ +GK +  
Sbjct: 14  LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKL-----LSSIEEMEEFFGKRVVE 68

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            +R  +EE + +++  ++  +V  LV GDP  ATTH+ + + A++ G++ + +H AS+  
Sbjct: 69  LERSDLEENSFRLIERAKSKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASIST 128

Query: 121 AV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           AV G+ GL  YRFG++ ++ +     R  +    IK NRS+  HTL  L
Sbjct: 129 AVCGLTGLHNYRFGKSATVSW----HRSQTPVNVIKANRSIDAHTLLFL 173

>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 232

 Score = 46.5 bits (111), Expect = 7e-07
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 16/126 (12%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKV-YIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           L  +G+G GD   +TLR +  ++    +    + +   S  LS       E+  G  I  
Sbjct: 5   LIGVGVGPGDSELLTLRAVNVLRSVPVICAPRSSSERESIALSIVEDILTERRDGCRILD 64

Query: 61  ADREMV----------EEKADKILSESQE-SNVAFLVVGDP--FGATTHTDLVVRAKKLG 107
               M           +  A  + +E ++  +VAF+ +GDP  +   ++  L  R + +G
Sbjct: 65  PVFPMTDDRDELESHWDSAARMVAAELEDGRDVAFITLGDPSIYSTFSY--LQQRIEDMG 122

Query: 108 IQVKAV 113
            + + V
Sbjct: 123 FKTEMV 128

>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Length = 221

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 13/91 (14%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           M++I+G G       T R  E +++ + +Y       L              +      +
Sbjct: 23  MIWIVGSGTCRG-QTTERAKEIIERAEVIY--GSRRALEL---------AGVVDDSRARI 70

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPF 91
                 +E   +I+ E +E  VA +  GDP 
Sbjct: 71  LRSFKGDE-IRRIMEEGREREVAVISTGDPM 100

>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae} Length = 251

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 23/135 (17%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYI----EAYTSLLS---------------FGL 42
           +Y+IG+G G    +TL+ +  ++    +      E  + LL+               + +
Sbjct: 5   IYVIGIGTGSPEFLTLQAISGLRHAQAIVALDKGEQKSDLLALRQKIVDTHAPGTPIYAV 64

Query: 43  STDGLSTLEKLYGKPIALADREMVEEKADKILSESQE-SNVAFLVVGDP--FGATTH-TD 98
           +          Y + +     E     A  I   + +   VAFLV GDP  + +T    +
Sbjct: 65  TDPERDRNPDNYEEEVRRWHAERAHLLASTIRERTPDDGAVAFLVWGDPSLYDSTLRIIE 124

Query: 99  LVVRAKKLGIQVKAV 113
            +   + L   VK +
Sbjct: 125 HMRNLEDLHADVKVI 139

>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus} Length = 275

 Score = 43.9 bits (103), Expect = 9e-06
 Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 26/137 (18%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYI----EAYTSLLSFG-------LSTDGLSTL 50
           L +IG+G G+ R IT + ++A+   D + I       + L           L+      +
Sbjct: 24  LSLIGIGTGNPRHITGQAVDAMNAADLILIPLKGADKSDLAGLRRQICAAHLTNPATKVI 83

Query: 51  E----------KLYGKPIALADREMVEEKADKILSE--SQESNVAFLVVGDP--FGATTH 96
           +            Y K +      + E    +I +     E  VA LV GDP  + +T  
Sbjct: 84  DFALPVRDASNPSYRKGVDDWHDAIAETWLSEITAHVPGLEGRVALLVWGDPSLYDSTLR 143

Query: 97  TDLVVRAKKLGIQVKAV 113
               +++ +L +  K +
Sbjct: 144 IAERLKS-RLPLTTKVI 159

>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A* Length = 259

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 12/102 (11%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLST------DGLSTLEKLYG 55
           +  + LG GD   IT++ L  +++ D +Y     S      S       +      KL G
Sbjct: 7   IISVSLGPGDPGLITVKALSQLREADVIYYPGTVSASGAVTSVALDILKEFDLDPSKLRG 66

Query: 56  KPIALADREMV-----EEKADKILSESQE-SNVAFLVVGDPF 91
             + ++                +  E Q    VA + VGD  
Sbjct: 67  MLVPMSRSRGAAEASYAANYASMAEEVQAGRRVAVVSVGDGG 108

>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus} Length = 251

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 12/91 (13%)

Query: 2  LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
          + + GLG G E  +T     A+ +   +    Y   ++          +    G  +   
Sbjct: 11 VTVAGLGPGREDLVTPEVTAALAEATDIV--GYIPYVAR---------IAPREGLTLHPT 59

Query: 62 DREMVEEKADKILSESQE-SNVAFLVVGDPF 91
          D  +  ++A   L  + E   V  +  GDP 
Sbjct: 60 DNRVELDRATHALEMAAEGRRVVVVSSGDPG 90

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	181
2z6r_A	265	Diphthine synthase; methyltransferase, S-adenosyl-	100.0
3i4t_A	292	Diphthine synthase; niaid, ssgcid, infectious dise	100.0
1vhv_A	268	Diphthine synthase; structural genomics, transfera	100.0
1wde_A	294	Probable diphthine synthase; structural genomics,	99.97
2ybo_A	294	Methyltransferase; SUMT, NIRE, heme D1 biosynthesi	99.97
4e16_A	253	Precorrin-4 C(11)-methyltransferase; structural ge	99.97
1s4d_A	280	Uroporphyrin-III C-methyltransferase; tetrapyrrole	99.97
1cbf_A	285	Cobalt-precorrin-4 transmethylase; precorrin-4 met	99.97
3ndc_A	264	Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH	99.97
1ve2_A	235	Uroporphyrin-III C-methyltransferase; heme, biosyn	99.97
2e0n_A	259	Precorrin-2 C20-methyltransferase; cobalt-factor I	99.96
2qbu_A	232	Precorrin-2 methyltransferase; HET: SAH; 2.10A {Me	99.96
1va0_A	239	Uroporphyrin-III C-methyltransferase; structural g	99.96
3nut_A	251	Precorrin-3 methylase; vitamin B12 pathway, cobala	99.95
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	99.95
1wyz_A	242	Putative S-adenosylmethionine-dependent methyltra;	99.95
2npn_A	251	Putative cobalamin synthesis related protein; COBF	99.95
3kwp_A	296	Predicted methyltransferase; putative methyltransf	99.95
2zvb_A	295	Precorrin-3 C17-methyltransferase; plasmid, struct	99.95
3nd1_A	275	Precorrin-6A synthase/COBF protein; methyltransfer	99.94
2bb3_A	221	Cobalamin biosynthesis precorrin-6Y methylase (CB;	99.94
3hh1_A	117	Tetrapyrrole methylase family protein; chlorobium	99.9
3ffy_A	115	Putative tetrapyrrole (corrin/porphyrin) methylas;	96.1

>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...

Probab=100.00  E-value=1.3e-34  Score=236.37  Aligned_cols=168  Identities=45%  Similarity=0.768  Sum_probs=138.2

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHH-HHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKIL-SESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~   79 (181)
                      |||+||+|||||++||++|+++|++||+|+++.+.+.+.. ...+   .++.+.++++...++...+++++.+. +.+++
T Consensus         2 ~l~iVG~GpG~~~~LT~~A~~~L~~advv~~~~~~~~l~~-~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g   77 (265)
T 2z6r_A            2 VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMAG-TTLG---RIQRLIGKEIRVLSREDVELNFENIVLPLAKE   77 (265)
T ss_dssp             CEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCCTT-CCHH---HHHHHHTSCCEEECHHHHHHHHHHHTHHHHTT
T ss_pred             EEEEEccCCCChHhcCHHHHHHHHhCCEEEEecccccccc-CCHH---HHHhccCCcEEEcCcccHHHHHHHHHHHHhCC
Confidence            6999999999999999999999999999999877532210 0123   44444444444334456677778887 77767


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHHHHcCCCcccCCceeEEecccCCCCCCChHHHHHHHhc
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~  159 (181)
                      ++|++|++|||++|+++.++++++.+.|++++++|||||++++|++|+||++++.++++++.+.|++|.+.++.+.+++.
T Consensus        78 ~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSs~~aaa~~g~pl~~~~~~~~v~~~s~~~~~~~~~~~l~~~~~  157 (265)
T 2z6r_A           78 NDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAE  157 (265)
T ss_dssp             SCEEEEESBCTTSSSSTHHHHHHHHHTTCCEEEECCCCHHHHGGGGTCCGGGBCCCEEECCCBTTBCCCHHHHHHHHHHH
T ss_pred             CcEEEEECCCCcCCCCHHHHHHHHHHCCCcEEEECChhHHHHHHHhCCCccCCCccEEEEEecCCcCCCchHHHHHHHHh
Confidence            89999999999999999999999999999999999999998669999999999999999999999998766777888888


Q ss_pred             CCCceEEEEccee
Q 030179          160 LGLHTLCLLGGVT  172 (181)
Q Consensus       160 ~~~~tlvlld~~~  172 (181)
                      .+.+|+|++|++.
T Consensus       158 ~~~~tlvl~d~~~  170 (265)
T 2z6r_A          158 RGLHTLLFLDIKA  170 (265)
T ss_dssp             TTCBEEEEECEEG
T ss_pred             CCCceEEEEeccc
Confidence            7779999988663

>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica}

Probab=100.00  E-value=1.6e-35  Score=245.21  Aligned_cols=166  Identities=59%  Similarity=0.997  Sum_probs=136.6

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHHHHccCC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   80 (181)
                      |||+||+||||+++||++|+++|++||+|+++.+++...  .+.+   .++.+.++++...++...+++++.+++.++++
T Consensus        22 ~l~lVG~GpGd~~~LT~rA~~~L~~ADvV~~e~~~s~~~--~~~~---~L~~~~~~~~i~~~~~~~~~~~~~i~~~a~~~   96 (292)
T 3i4t_A           22 MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAILQ--CDVA---KLEEFYGKKVIIGDRDLVETEADQILEPAKTK   96 (292)
T ss_dssp             EEEEEECBSSSGGGSCHHHHHHHHHCSEEEECGGGGGSS--SCHH---HHHHHHTSCCEEC-------CCCTTHHHHTTS
T ss_pred             EEEEEEECCCChHHhhHHHHHHHHhCCEEEEeccccccc--CCHH---HHHhCCCCeEEEcccccHHHHHHHHHHHhcCC
Confidence            689999999999999999999999999999987754321  2344   33333444443333334455566677766668


Q ss_pred             CEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHHHHcCCCcccCCceeEEecccCCCCCCChHHHHHHHhcC
Q 030179           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSL  160 (181)
Q Consensus        81 ~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~  160 (181)
                      +|++|++|||++|+++.++++++.+.|++++++|||||++|+|++|+||++++.+.++.+.+.|++|.++++.+++++..
T Consensus        97 ~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~A~a~~G~pl~~~~~~~sv~~~t~~~~p~~~~~~~~~~l~~  176 (292)
T 3i4t_A           97 NVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMNAIGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDN  176 (292)
T ss_dssp             EEEEEESBCHHHHCTTHHHHHHHHHHTCCEEEECCCCHHHHGGGGSCCGGGBCCCEEECCCBTTBCCCTHHHHHHHHHHT
T ss_pred             CEEEEecCCCCccccHHHHHHHHHHCCCcEEEECCHHHHHHHHHhCCCcccCCceeEEEEEeCCCCCCccHHHHHHHhhc
Confidence            99999999999999999999999888999999999999998899999999999999999999999998888899999999


Q ss_pred             CCceEEEEcce
Q 030179          161 GLHTLCLLGGV  171 (181)
Q Consensus       161 ~~~tlvlld~~  171 (181)
                      +.+|+||+|.+
T Consensus       177 ~~~Tlvl~d~~  187 (292)
T 3i4t_A          177 NMHTLVLLDIK  187 (292)
T ss_dssp             TCBEEEEECEE
T ss_pred             CCCeEEEEecc
Confidence            99999999877

>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1

Probab=100.00  E-value=1.5e-32  Score=224.90  Aligned_cols=161  Identities=38%  Similarity=0.670  Sum_probs=129.2

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHHHHccCC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   80 (181)
                      +||+||+|||||++||++|+++|++||+|+++.+.+.+..     ..+.++.+++++.....+..++++++.+++.++++
T Consensus        14 ~l~vVG~GpGd~~lLTlrA~~~L~~ADvI~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~   88 (268)
T 1vhv_A           14 LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKLLS-----SIEEMEEFFGKRVVELERSDLEENSFRLIERAKSK   88 (268)
T ss_dssp             EEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCCSS-----CHHHHHHHHTSCCEEECHHHHTTTHHHHHHHHTTS
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHhcCCEEEECCchHhhhc-----cHHHHHHHhCCCccccchhHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999999876543321     12245554555443322455667778888877668


Q ss_pred             CEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHhc
Q 030179           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (181)
Q Consensus        81 ~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~  159 (181)
                      +|++|++|||++|+++.++++++++.|++++++|||||++++ |++|+||++++..+++.+    +.|.+.++.+.+++.
T Consensus        89 ~Va~L~~GDP~iy~~~~~l~~~~~~~gi~vevIPGiSs~~aa~a~~G~pl~~~~~~~sv~~----~~~~~~~~~~~~~l~  164 (268)
T 1vhv_A           89 SVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCGLTGLHNYRFGKSATVSW----HRSQTPVNVIKANRS  164 (268)
T ss_dssp             EEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHCCCGGGBCCCEEECS----SCCSHHHHHHHHHHH
T ss_pred             CEEEEeCCCCcccCcHHHHHHHHHHCCCcEEEECCccHHHHHHHHcCCCcccCcceEEEEe----cCCCchHHHHHHHhc
Confidence            999999999999999999999898899999999999999975 999999999888888855    334444666777788


Q ss_pred             CCCceEEEEcc
Q 030179          160 LGLHTLCLLGG  170 (181)
Q Consensus       160 ~~~~tlvlld~  170 (181)
                      ...+|+|++|.
T Consensus       165 ~~~~tlvl~d~  175 (268)
T 1vhv_A          165 IDAHTLLFLDL  175 (268)
T ss_dssp             TTCBEEEEECC
T ss_pred             cCCCeEEEEcC
Confidence            88899999774

>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1

Probab=99.97  E-value=7.3e-32  Score=223.51  Aligned_cols=168  Identities=33%  Similarity=0.409  Sum_probs=133.7

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      |||+||+| ||+++||++|+++|++||+|+++.++..    -..++++.+..+. .+++...++...+++++.+.+.+++
T Consensus         9 ~l~lVG~G-Gd~~lLTl~A~~~L~~ADvV~~~~~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~~g   83 (294)
T 1wde_A            9 TLLLVGWG-YAPGMQTLEALDAVRRADVVYVESYTMP----GSSWLYKSVVEAAGEARVVEASRRDLEERSREIVSRALD   83 (294)
T ss_dssp             EEEEEECB-SSTTCCCHHHHHHHHHCSEEEEECSSST----TCHHHHHHHHHHHTSSSEEECCHHHHHTSHHHHTCCSSC
T ss_pred             EEEEEECC-CChHHhhHHHHHHHHhCCEEEEeccccc----ccccchHHHHHhccCCeEEecChHHHHHHHHHHHHHhCC
Confidence            59999999 9999999999999999999999876410    0012122222222 2333333444556677777776666


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHh
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR  158 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~  158 (181)
                      ++|++|++|||++|+++.++++++.+.|++++++|||||++++ |++|+||+++++++++++.+.|+.|.+.++.+.+++
T Consensus        84 ~~Vv~L~~GDP~v~g~~~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~~~~~~~~v~~~~~~~~p~~~~~~l~~~l  163 (294)
T 1wde_A           84 AVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNL  163 (294)
T ss_dssp             CEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTCCGGGEEEEEEECCGGGCCCCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHhHHHHHHHHhCCCccCCCceEEEEeccCcccCCChHHHHHHHH
Confidence            7999999999999999999999999999999999999999976 999999999999999988888877765677888888


Q ss_pred             cCCCceEEEEcceee
Q 030179          159 SLGLHTLCLLGGVTL  173 (181)
Q Consensus       159 ~~~~~tlvlld~~~~  173 (181)
                      ..+.+|+||++....
T Consensus       164 ~~~~~tlvl~~~~~~  178 (294)
T 1wde_A          164 CAGLHTTALLDVDER  178 (294)
T ss_dssp             HHTCEEEEEECBCTT
T ss_pred             hcCCCeEEEEecccc
Confidence            888899999987643

>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*

Probab=99.97  E-value=3.1e-31  Score=219.83  Aligned_cols=165  Identities=19%  Similarity=0.244  Sum_probs=122.2

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHH----Hh-CCccccCChHHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEK----LY-GKPIALADREMVEEKADKILS   75 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~----~~-~~~~~~~~~~~~~~~~~~i~~   75 (181)
                      |||+||+|||||++||++|+++|++||+|+++.+.+       .+.++.+..    ++ ++..... ...++++.+.+.+
T Consensus        26 ~l~lVG~GpGdp~lLTlrA~~~L~~ADvV~~d~~~~-------~~il~~~~~~~~~i~~~k~~~~~-~~~~~~i~~~l~~   97 (294)
T 2ybo_A           26 SVALVGAGPGDPGLLTLRAWALLQQAEVVVYDRLVA-------RELIALLPESCQRIYVGKRCGHH-SLPQEEINELLVR   97 (294)
T ss_dssp             CEEEEEEESSCGGGSCHHHHHHHTTCSEEEECTTSC-------HHHHHHSCTTSEEEECC---------CHHHHHHHHHH
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHcCCEEEEcCCCC-------HHHHHhcccCCeEEecccccccc-cCCHHHHHHHHHH
Confidence            699999999999999999999999999999975532       222211111    00 1111111 1235677777887


Q ss_pred             HccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHH
Q 030179           76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEK  153 (181)
Q Consensus        76 ~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~  153 (181)
                      .+++ ++|++|++|||++|+++.++++.+.+.|++++++|||||++++ |++|+||++++.+.++.+.+.|+++.+....
T Consensus        98 ~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~vevIPGiSS~~aa~a~~Giplt~~~~~~~~~~~sg~~~~~~~~~~  177 (294)
T 2ybo_A           98 LARQQRRVVRLKGGDPFIFGRGAEELERLLEAGVDCQVVPGVTAASGCSTYAGIPLTHRDLAQSCTFVTGHLQNDGRLDL  177 (294)
T ss_dssp             HHHTTCCEEEEEEBCTTSSSSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCSCBTTTBSCEEEEECSCCTTSSCCC
T ss_pred             HHHCCCeEEEEcCCCCCccCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHcCCCcccCCCCcEEEEEcccCCcccchhh
Confidence            7765 7999999999999999999999999999999999999999975 9999999998876666667777765321112


Q ss_pred             HHHHhcCCCceEEEEcceee
Q 030179          154 IKRNRSLGLHTLCLLGGVTL  173 (181)
Q Consensus       154 i~~~~~~~~~tlvlld~~~~  173 (181)
                      .++.+....+|+||++...+
T Consensus       178 ~~~~l~~~~~tlVl~~~~~~  197 (294)
T 2ybo_A          178 DWAGLARGKQTLVFYMGLGN  197 (294)
T ss_dssp             CHHHHTSSSCEEEEESCGGG
T ss_pred             HHHHHhcCCCeEEEECcHHH
Confidence            35566777899999976543

>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}

Probab=99.97  E-value=9.3e-31  Score=212.59  Aligned_cols=161  Identities=17%  Similarity=0.121  Sum_probs=117.9

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCc-ccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHcc
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAY-TSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQ   78 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~-~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~   78 (181)
                      +||+||+||||+++||++|+++|++||+|+++++ ..       .+   .++.+. ++++.......++++++.+.+.++
T Consensus         6 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~-------~~---~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~   75 (253)
T 4e16_A            6 KVHFVGAGPGDKELITLKGYKLLSNADVVIYAGSLVN-------PE---LLEYCKEDCQIHNSAHMDLQEIIDVMREGIE   75 (253)
T ss_dssp             CEEEEECBSSCGGGSCHHHHHHHHHCSEEEECTTTSC-------GG---GGGGSCTTCEEEEGGGCCHHHHHHHHHHHHH
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEeCCCCC-------HH---HHhhcCCCCEEEecCCCCHHHHHHHHHHHHH
Confidence            5999999999999999999999999999999643 21       11   111111 122211112235677788887776


Q ss_pred             C-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHH
Q 030179           79 E-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKR  156 (181)
Q Consensus        79 ~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~  156 (181)
                      + ++|++|++|||++|+++.++++.+.+.|++++++|||||++++ |++|+||++.+.+.++.+.+.|++........++
T Consensus        76 ~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSS~~aa~a~~G~plt~~~~~~~~~~~~~~g~~~~~~~~~~~  155 (253)
T 4e16_A           76 NNKSVVRLQTGDFSIYGSIREQVEDLNKLNIDYDCTPGVSSFLGAASSLGVEYTVPEISQSVIITRMEGRTPVPEKESIQ  155 (253)
T ss_dssp             TTCCEEEEESBCTTTTCCHHHHHHHHHHHTCCEEEECCCCHHHHHHHHHTCCSCBTTTBSCEEEEEC---CCCCGGGSHH
T ss_pred             CCCcEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHhCCCcccCCccceEEEEeccCCCCcchHHHHH
Confidence            5 7999999999999999999999998889999999999999975 8999999987766666666777764211112345


Q ss_pred             HhcCCCceEEEEcce
Q 030179          157 NRSLGLHTLCLLGGV  171 (181)
Q Consensus       157 ~~~~~~~tlvlld~~  171 (181)
                      .+.....|+|+++-.
T Consensus       156 ~l~~~~~t~vl~~~~  170 (253)
T 4e16_A          156 SYAKHQTSMVIFLSV  170 (253)
T ss_dssp             HHHTTCSEEEEEECS
T ss_pred             HHhcCCCeEEEECcH
Confidence            566777899998753

>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1

Probab=99.97  E-value=8.4e-31  Score=215.77  Aligned_cols=165  Identities=15%  Similarity=0.164  Sum_probs=120.9

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHH----H-hCCccccCChHHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEK----L-YGKPIALADREMVEEKADKILS   75 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~----~-~~~~~~~~~~~~~~~~~~~i~~   75 (181)
                      |||+||+|||||++||++|+++|++||+|+|+.+.+       .+.++.+..    + .++....+ ...++++.+.+.+
T Consensus        16 ~l~lVG~GpGd~~lLTl~A~~~L~~ADvV~~d~~~~-------~~ll~~~~~~~~~~~~~k~~~~~-~~~~~~i~~~l~~   87 (280)
T 1s4d_A           16 SVWLVGAGPGDPGLLTLHAANALRQADVIVHDALVN-------EDCLKLARPGAVLEFAGKRGGKP-SPKQRDISLRLVE   87 (280)
T ss_dssp             CEEEEECBSSCTTSSBHHHHHHHHHCSEEEECSCSC-------TTGGGGSSTTCCEEECSCCC--C-CCCHHHHHHHHHH
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEcCCCC-------HHHHHhccCCCEEEecccccccc-ccCHHHHHHHHHH
Confidence            699999999999999999999999999999976532       222221111    0 01111111 1235677788888


Q ss_pred             HccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCCh-HH
Q 030179           76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF-YE  152 (181)
Q Consensus        76 ~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~-~~  152 (181)
                      .+++ ++|++|++|||++|+++.++++.+++.|++++++|||||++++ |++|+||++++.+.++.+.+.|+++... ..
T Consensus        88 ~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~~~~~~~~~~~~~~~~~~~~~~~~  167 (280)
T 1s4d_A           88 LARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHDSSGLVPDR  167 (280)
T ss_dssp             HHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC-------C
T ss_pred             HHhCCCeEEEEcCCCCccccCHHHHHHHHHHCCCCEEEEcCccHHHHHHHHcCCCccCCCcccEEEEECCcCCccccccc
Confidence            7765 7999999999999999999999999999999999999999975 9999999988876666666777765210 00


Q ss_pred             HHHHHhcCCCceEEEEcceee
Q 030179          153 KIKRNRSLGLHTLCLLGGVTL  173 (181)
Q Consensus       153 ~i~~~~~~~~~tlvlld~~~~  173 (181)
                      ..++.+....+|+||++...+
T Consensus       168 ~~~~~l~~~~~tlVl~~~~~~  188 (280)
T 1s4d_A          168 INWQGIASGSPVIVMYMAMKH  188 (280)
T ss_dssp             CCHHHHHTTCSEEEEESCSTT
T ss_pred             ccHHHHhCCCCeEEEECchhh
Confidence            124445567799999987654

>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*

Probab=99.97  E-value=1e-30  Score=215.56  Aligned_cols=163  Identities=23%  Similarity=0.220  Sum_probs=122.2

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      |||+||+||||+++||++|+++|++||+|+|++..      ...+   .++.+. +++........++++.+.+.+.+++
T Consensus        22 ~l~lVG~GpGd~~~LT~~A~~~L~~AdvV~~~~~~------~~~~---ll~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   92 (285)
T 1cbf_A           22 KLYIIGAGPGDPDLITVKGLKLLQQADVVLYADSL------VSQD---LIAKSKPGAEVLKTAGMHLEEMVGTMLDRMRE   92 (285)
T ss_dssp             EEEEEECBSSCGGGSCHHHHHHHHHCSEEEECTTT------SCHH---HHTTSCTTCEEEECTTCCHHHHHHHHHHHHTT
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEeCCC------CCHH---HHHhcCCCCEEEecCCCCHHHHHHHHHHHHHC
Confidence            58999999999999999999999999999996431      1111   222111 2222221122356778888887765


Q ss_pred             -CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHH
Q 030179           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRN  157 (181)
Q Consensus        80 -~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~  157 (181)
                       ++|++|++|||++|+++.++++.+.+.|++++++|||||++++ |++|+||+.++.+.++.+.+.|++........+.+
T Consensus        93 g~~Vv~L~~GDP~i~g~~~~l~~~l~~~gi~veviPGiSS~~aa~a~~G~pl~~~~~~~~~~~~~~~g~~~~~~~~~l~~  172 (285)
T 1cbf_A           93 GKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGRTPVPEFEKLTD  172 (285)
T ss_dssp             TCCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHTTCCSCBTTTBCCEEEEECCSSSCCCGGGCHHH
T ss_pred             CCeEEEEeCCCccccccHHHHHHHHHHCCCcEEEECCchHHHHHHHHcCCCcccCCcceeEEEeccCCCCCcchHHHHHH
Confidence             7999999999999999999999999999999999999999975 89999999888766776766677621111223456


Q ss_pred             hcCCCceEEEEccee
Q 030179          158 RSLGLHTLCLLGGVT  172 (181)
Q Consensus       158 ~~~~~~tlvlld~~~  172 (181)
                      +..+.+|+|+++...
T Consensus       173 l~~~~~tlvl~~~~~  187 (285)
T 1cbf_A          173 LAKHKCTIALFLSST  187 (285)
T ss_dssp             HHTTCSEEEEESCTT
T ss_pred             HhcCCCeEEEECcHH
Confidence            667779999997543

>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A

Probab=99.97  E-value=2.2e-30  Score=211.72  Aligned_cols=161  Identities=20%  Similarity=0.163  Sum_probs=119.7

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      |||+||+||||+++||++|+++|++||+|+++++.      ...+   .++.+. ++++.......++++++.+.+.+++
T Consensus         5 ~l~iVG~GpG~~~lLT~~A~~~L~~AdvV~~~~~~------~~~~---ll~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   75 (264)
T 3ndc_A            5 TVHFIGAGPGAADLITIRGRDLIASCPVCLYAGSL------VPEA---LLAHCPPGAKIVNTAPMSLDAIIDTIAEAHAA   75 (264)
T ss_dssp             CEEEEECBSSCGGGSBHHHHHHHHHCSEEEECSTT------SCGG---GGGGSCTTCEEEECTTSCHHHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCChHHHHHHHHHHHHcCCEEEEECCC------CCHH---HHhhcCCCCEEEecCCCCHHHHHHHHHHHHHC
Confidence            69999999999999999999999999999995431      1112   122111 2222211122356777888877655


Q ss_pred             -CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCC--CChHHHHH
Q 030179           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRP--GSFYEKIK  155 (181)
Q Consensus        80 -~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~--~~~~~~i~  155 (181)
                       ++|++|++|||++|+++.++++.+.+.|++++++|||||++++ |++|+||++.+...++.+.+.|++.  ....+. +
T Consensus        76 G~~Va~L~~GDP~iyg~~~~l~~~l~~~gi~veviPGiSs~~aaaA~lG~plt~~~~~~~~~~~s~~~~~~~~~~~~~-l  154 (264)
T 3ndc_A           76 GQDVARLHSGDLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAAATLGAELTLPGVAQSVILTRTSGRASAMPAGET-L  154 (264)
T ss_dssp             TCCEEEEESBCTTSSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHTCCSCBTTTBCCEEEEECCTTTCCCCTTCC-H
T ss_pred             CCeEEEEeCCCCccccHHHHHHHHHHhCCCCEEEeCCHHHHHHHHHHhCCCccCCCceeEEEEEeccCCCCCcchHHH-H
Confidence             8999999999999999999999999999999999999999975 8999999988877777777777763  111122 4


Q ss_pred             HHhcCCCceEEEEcce
Q 030179          156 RNRSLGLHTLCLLGGV  171 (181)
Q Consensus       156 ~~~~~~~~tlvlld~~  171 (181)
                      +.+.....|+|++.-.
T Consensus       155 ~~l~~~~~tlvl~~~~  170 (264)
T 3ndc_A          155 ENFARTGAVLAIHLSV  170 (264)
T ss_dssp             HHHHTTTCEEEEESCG
T ss_pred             HHHhcCCCcEEEecCH
Confidence            4455566888888654

>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1

Probab=99.97  E-value=3.1e-30  Score=207.04  Aligned_cols=153  Identities=20%  Similarity=0.253  Sum_probs=114.5

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCC------hHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALAD------REMVEEKADKIL   74 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~i~   74 (181)
                      +||+||+|||||++||++|+++|++||+|+++.+.+       .+.++.+    +++.....      ...++++.+.+.
T Consensus         4 ~l~vVG~GpG~~~~LT~~A~~~L~~advv~~~~~~~-------~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~   72 (235)
T 1ve2_A            4 KVYLVGAGFGGPEHLTLKALRVLEVAEVVLHDRLVH-------PGVLALA----KGELVPVGKEGYGGKTPQEAITARLI   72 (235)
T ss_dssp             EEEEEECBSSSGGGSBHHHHHHHHHCSEEEECTTSC-------HHHHTTC----CSEEEEC-------CCCHHHHHHHHH
T ss_pred             EEEEEeeCCCCHHHHHHHHHHHHHhCCEEEEeCCCC-------HHHHHhh----CcEEEEecccCcccccCHHHHHHHHH
Confidence            489999999999999999999999999999975532       2211111    11111100      123567777787


Q ss_pred             HHccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHH
Q 030179           75 SESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYE  152 (181)
Q Consensus        75 ~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~  152 (181)
                      +.+++ ++|++|++|||++|+++.++++.+.+.|++++++|||||++++ |++|+||++++.+.++.+.+.|+ |.+   
T Consensus        73 ~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~g~pl~~~~~~~~~~~~s~~~-~~~---  148 (235)
T 1ve2_A           73 ALAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGHD-PAL---  148 (235)
T ss_dssp             HHHHTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHHHHHTTCCSCBTTTBSCEEEEESSC-TTS---
T ss_pred             HHHHcCCeEEEEcCCCCCcccCHHHHHHHHHHCCCCEEEECCHhHHHHHHHHcCCCcccCCcccEEEEeCCCC-chh---
Confidence            77766 7999999999999999999999998889999999999999975 99999999987655555666776 532   


Q ss_pred             HHHHHhcCCCceEEEEcceee
Q 030179          153 KIKRNRSLGLHTLCLLGGVTL  173 (181)
Q Consensus       153 ~i~~~~~~~~~tlvlld~~~~  173 (181)
                          ++. +.+|+|+++-..+
T Consensus       149 ----~l~-~~~t~vl~~~~~~  164 (235)
T 1ve2_A          149 ----PLP-RADTLVLLMPLHT  164 (235)
T ss_dssp             ----CCC-BCSEEEEEC----
T ss_pred             ----hhc-cCCeEEEEcChhh
Confidence                444 6689999975544

>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*

Probab=99.96  E-value=1e-29  Score=206.78  Aligned_cols=161  Identities=18%  Similarity=0.198  Sum_probs=116.7

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh------CCccc-----cCCh-----H
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY------GKPIA-----LADR-----E   64 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~------~~~~~-----~~~~-----~   64 (181)
                      +||+||+|||||++||++|+++|++||+|+++.....-     .++++.+..+.      ++++.     +...     .
T Consensus         6 ~l~iVG~GpG~~~~LT~~A~~~L~~advV~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (259)
T 2e0n_A            6 SIISVSLGPGDPGLITVKALSQLREADVIYYPGTVSAS-----GAVTSVALDILKEFDLDPSKLRGMLVPMSRSRGAAEA   80 (259)
T ss_dssp             EEEEEECBSSCGGGSBHHHHHHHHHCSEEEEEEEECTT-----CCEECHHHHHHTTTTCCGGGEEEEEEECC--------
T ss_pred             EEEEEEeCCCChHHHHHHHHHHHHhCCEEEEecccccc-----ccHHHHHHHHHHhcCCCCCEEEeeccCCccchhhhHH
Confidence            48999999999999999999999999999998543100     01112332211      11111     1111     1


Q ss_pred             HHHHHHHHHHHHccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEeccc
Q 030179           65 MVEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFT  142 (181)
Q Consensus        65 ~~~~~~~~i~~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~  142 (181)
                      .++++.+.+.+.+++ ++|++|++|||++|+++.++++.+.+.|++++++|||||++++ |++|+||++++..++++..+
T Consensus        81 ~~~~~~~~i~~~~~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~G~pl~~~~~~~~~~~~~  160 (259)
T 2e0n_A           81 SYAANYASMAEEVQAGRRVAVVSVGDGGFYSTASAIIERARRDGLDCSMTPGIPAFIAAGSAAGMPLALQSDSVLVLAQI  160 (259)
T ss_dssp             -CGGGHHHHHHHHHTTCEEEEEESBCTTBSCTHHHHHHHHHTTTCCEEEECCCCHHHHHHHHTTCCSBCTTCCEEEECSC
T ss_pred             HHHHHHHHHHHHHHCCCeEEEEeCCCCcccccHHHHHHHHHHCCCCEEEeCChhHHHHHHHhcCCCCcCCCceEEEEcCC
Confidence            245677788887765 7999999999999999999999999999999999999999975 99999999887777765432


Q ss_pred             CCCCCCChHHHHHHHhcCCCceEEEEcceee
Q 030179          143 ETWRPGSFYEKIKRNRSLGLHTLCLLGGVTL  173 (181)
Q Consensus       143 ~~~~~~~~~~~i~~~~~~~~~tlvlld~~~~  173 (181)
                        . +   .+.+.+.+. ..+|+|+++...+
T Consensus       161 --~-~---~~~l~~~~~-~~~t~vl~~~~~~  184 (259)
T 2e0n_A          161 --D-E---IGELERALV-THSTVVVMKLSTV  184 (259)
T ss_dssp             --S-S---THHHHHHHT-TCSEEEECCTTSS
T ss_pred             --C-C---HHHHHHHhh-cCCEEEEEccccc
Confidence              1 1   244444444 4589999976654

>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}

Probab=99.96  E-value=3.4e-29  Score=200.12  Aligned_cols=158  Identities=21%  Similarity=0.295  Sum_probs=117.3

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccc--hhhhhHHHh-----CCccc---c--C-C----h
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTD--GLSTLEKLY-----GKPIA---L--A-D----R   63 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~--~l~~~~~~~-----~~~~~---~--~-~----~   63 (181)
                      |||+||+|||||++||++|+++|++||+|+++.+...      .+  +++.++.+.     +++..   +  . +    .
T Consensus         4 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~------~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (232)
T 2qbu_A            4 KLIGVGVGPGDSELLTLRAVNVLRSVPVICAPRSSSE------RESIALSIVEDILTERRDGCRILDPVFPMTDDRDELE   77 (232)
T ss_dssp             CEEEEECBSSCGGGSBHHHHHHHHHCSEEECCBCTTC------SSCHHHHHHHHHHHHCSSCCEEECCBCCSCSSSTTHH
T ss_pred             eEEEEEcCCCChHHHHHHHHHHHHhCCEEEEeCCCCC------ccchHHHHHHHHhccccCCcEEEEecCCCCccHHHHH
Confidence            6999999999999999999999999999999865310      01  122332221     12111   0  0 1    1


Q ss_pred             HHHHHHHHHHHHHccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecc
Q 030179           64 EMVEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFF  141 (181)
Q Consensus        64 ~~~~~~~~~i~~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~  141 (181)
                      ..++++++.+.+.+++ ++|+++++|||++|+++.++++.+.+.|++++++|||||++++ |++|+|+++++..+.+++ 
T Consensus        78 ~~~~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiSs~~aa~a~~g~pl~~~~~~~~~~~-  156 (232)
T 2qbu_A           78 SHWDSAARMVAAELEDGRDVAFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTACAATAGRTLVEGDEILLVVP-  156 (232)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCCBCTTCCEEEES-
T ss_pred             HHHHHHHHHHHHHHHCCCeEEEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCccHHHHHHHHhCCCCCCCCceEEEEe-
Confidence            3467888888887766 7999999999999999999999999999999999999999975 999999998777777643 


Q ss_pred             cCCCCCCChHHHHHHHhcCCCceEEEEcceee
Q 030179          142 TETWRPGSFYEKIKRNRSLGLHTLCLLGGVTL  173 (181)
Q Consensus       142 ~~~~~~~~~~~~i~~~~~~~~~tlvlld~~~~  173 (181)
                         +++.    .+...+.. .+|+|+++...+
T Consensus       157 ---~~~~----~l~~~~~~-~~t~vl~~~~~~  180 (232)
T 2qbu_A          157 ---RVDD----RFERVLRD-VDACVIMKTSRH  180 (232)
T ss_dssp             ---SCCH----HHHHHGGG-CSEEEESSHHHH
T ss_pred             ---CCHH----HHHHHhhc-CCeEEEEcccCc
Confidence               2221    33344433 479999976543

>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A

Probab=99.96  E-value=4.1e-30  Score=206.80  Aligned_cols=158  Identities=23%  Similarity=0.247  Sum_probs=117.9

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhH-H-H-hCCccccCChHHHHHHHHHHHHHc
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLE-K-L-YGKPIALADREMVEEKADKILSES   77 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~-~-~-~~~~~~~~~~~~~~~~~~~i~~~~   77 (181)
                      |||+||+|||||++||++|+++|++||+|+++.+.+       ++.++.+. + + .+++.. . ...++++.+.+.+.+
T Consensus         2 ~l~iVG~GpG~~~~LT~~A~~~L~~advI~~~~~~~-------~~~l~~~~~~~i~~~~~~~-~-~~~~~~~~~~i~~~~   72 (239)
T 1va0_A            2 RVYLVGAGPGDPELLTLKAYRLLKEAPVVLYDRLVD-------ERVLALAPGEKVYVGKEEG-E-SEKQEEIHRLLLRHA   72 (239)
T ss_dssp             EEEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTSC-------HHHHTTCCSEEEECCCCC------CHHHHHHHHHHHH
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEcCCCC-------HHHHhhccccEEecccccc-c-ccCHHHHHHHHHHHH
Confidence            689999999999999999999999999999975532       22221111 0 0 111110 0 234567778888777


Q ss_pred             cC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHHHHcCCCcccCCceeEEecccCCCCCCChHHHHHH
Q 030179           78 QE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKR  156 (181)
Q Consensus        78 ~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~  156 (181)
                      ++ ++|+++++|||++|+++.++++.+++.|++++++|||||++++   |+||++++.+.++.+.+.|+++..  ...++
T Consensus        73 ~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa---g~pl~~~~~~~~~~~~~~~~~~~~--~~~~~  147 (239)
T 1va0_A           73 RAHPFVVRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLAS---GLPLTHRGLAHGFAAVSGVLEGGG--YPDLR  147 (239)
T ss_dssp             HTSSEEEEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCCCGGGTT---CCCSSBTTTBSEEEEEESSCGGGC--CCCCT
T ss_pred             HCCCcEEEEeCCCCccccCHHHHHHHHHHCCCcEEEECCcchHhhc---CCCcccCCccceEEEEeccCCccc--hhhHH
Confidence            65 7999999999999999999999999999999999999999987   999999876555656667765421  12355


Q ss_pred             HhcCCCceEEEEcceee
Q 030179          157 NRSLGLHTLCLLGGVTL  173 (181)
Q Consensus       157 ~~~~~~~tlvlld~~~~  173 (181)
                      ++..+ +|+|+++...+
T Consensus       148 ~l~~~-~t~vl~~~~~~  163 (239)
T 1va0_A          148 PFARV-PTLVVLMGVGR  163 (239)
T ss_dssp             TTTTC-SSEEEESCSTT
T ss_pred             HhcCC-CcEEEEccHHH
Confidence            66677 99999976543

>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus}

Probab=99.95  E-value=1.5e-28  Score=199.36  Aligned_cols=151  Identities=16%  Similarity=0.155  Sum_probs=104.3

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCcccc-CChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL-ADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~   79 (181)
                      ++|+||+|||||++||++|+++|++||+|++.++.           ++.+....+++... ...+..+ .++.+++.+++
T Consensus        10 ~~~~vG~GPGd~~lLT~rA~~~L~~AdvI~g~d~~-----------~~~~~~~~~~~~~~~~~~~ei~-~~~~li~~~~~   77 (251)
T 3nut_A           10 WVTVAGLGPGREDLVTPEVTAALAEATDIVGYIPY-----------VARIAPREGLTLHPTDNRVELD-RATHALEMAAE   77 (251)
T ss_dssp             EEEEEECBSSCGGGSCHHHHHHHHHCSEEEECGGG-----------GTTCCCCTTCEEEECCSSCCHH-HHHHHHHHHHT
T ss_pred             cEEEEEECCCCHHHHHHHHHHHHHhCCEEEEcCcc-----------cccccccCCCEEeecCCHHHHH-HHHHHHHHHHC
Confidence            58999999999999999999999999999975331           01111011222211 1111111 12456665655


Q ss_pred             -CCEEEEecCCccccccHHHHHHHHHh----CCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHH
Q 030179           80 -SNVAFLVVGDPFGATTHTDLVVRAKK----LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEK  153 (181)
Q Consensus        80 -~~V~~l~~GDP~~~~~~~~l~~~~~~----~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~  153 (181)
                       ++|++|++|||++|+++.++++.+.+    .|++++++|||||++++ |++|+||++...     +.+.|++.. .++.
T Consensus        78 G~~Vv~L~~GDP~i~g~g~~l~~~l~~~~~~~gi~veviPGiSS~~aa~a~~G~plt~~~~-----~~s~~~~~~-~~~~  151 (251)
T 3nut_A           78 GRRVVVVSSGDPGVFAMASALFEALEAHPEHAGTEIRILPGITAMLAAAAAAGAPLGHDFC-----AINLSDNLK-PFEI  151 (251)
T ss_dssp             TCEEEEEESBCTTSSSHHHHHHHHHHHCGGGTTCCEEEECCCCHHHHHHHHHEETTSSSEE-----EEESCCTTS-CHHH
T ss_pred             CCeEEEEeCCCcccccCHHHHHHHHHhhcccCCCcEEEECCHHHHHHHHHHhCCCccCCeE-----EEEecCCCC-ChHH
Confidence             79999999999999999999999987    89999999999999975 899999975432     223344321 2444


Q ss_pred             HHHH---hcCCCceEEEEc
Q 030179          154 IKRN---RSLGLHTLCLLG  169 (181)
Q Consensus       154 i~~~---~~~~~~tlvlld  169 (181)
                      +.+.   +.....|+|++.
T Consensus       152 ~~~~l~~l~~~~~tlvl~~  170 (251)
T 3nut_A          152 LEKRLRHAARGDFAMAFYN  170 (251)
T ss_dssp             HHHHHHHHHHTTCEEEEES
T ss_pred             HHHHHHHHhCCCCEEEEEC
Confidence            4433   345567888885

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=99.95  E-value=4.9e-29  Score=217.64  Aligned_cols=163  Identities=23%  Similarity=0.288  Sum_probs=120.3

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHH----H-hCCccccCChHHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEK----L-YGKPIALADREMVEEKADKILS   75 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~----~-~~~~~~~~~~~~~~~~~~~i~~   75 (181)
                      +||+||+|||||++||++|+++|++||+|+|+.+.+       .+.++.+..    + .++....+ ...++++.+.+.+
T Consensus       217 ~l~lVG~GpGd~~lLTlrA~~~L~~ADvV~~d~~~~-------~~il~~~~~~~~~~~~~k~~~~~-~~~~~~i~~~l~~  288 (457)
T 1pjq_A          217 EVVLVGAGPGDAGLLTLKGLQQIQQADIVVYDRLVS-------DDIMNLVRRDADRVFVGKRAGYH-CVPQEEINQILLR  288 (457)
T ss_dssp             EEEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTSC-------HHHHTTSCTTSEEEECSCC---C-CCTTHHHHHHHHH
T ss_pred             EEEEEeCCCCChHHccHHHHHHHHhCCEEEEeCCCC-------HHHHhhcccCCEEEecccccccc-CCCHHHHHHHHHH
Confidence            589999999999999999999999999999976542       121111110    1 11211111 1235677777887


Q ss_pred             HccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHH
Q 030179           76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEK  153 (181)
Q Consensus        76 ~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~  153 (181)
                      .+++ ++|++|++|||++|+++.++++.+.+.|++++++|||||++++ |++|+||++++.+.++.+.+.|+++..  ..
T Consensus       289 ~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~v~vvPGiSs~~aa~a~~Giplt~~~~~~~~~~vsg~~~~~~--~~  366 (457)
T 1pjq_A          289 EAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHLKTGG--EL  366 (457)
T ss_dssp             HHHTTCEEEEEESBCTTTSSSHHHHHTTTTTTTCCEEEECCCCHHHHHHHHTTCCSCCTTTCSEEEEECC--------CC
T ss_pred             HHHCCCcEEEEeCCCCCccCCHHHHHHHHHHCCCCEEEeCCHhHHHHHHHHcCCCccCCCccceEEEEeCCCCCcc--hh
Confidence            7766 7999999999999999999999998899999999999999975 899999999988777777788876421  11


Q ss_pred             HHHHhcCCCceEEEEcceee
Q 030179          154 IKRNRSLGLHTLCLLGGVTL  173 (181)
Q Consensus       154 i~~~~~~~~~tlvlld~~~~  173 (181)
                      .++++....+|+||++...+
T Consensus       367 ~~~~l~~~~~t~Vl~~~~~~  386 (457)
T 1pjq_A          367 DWENLAAEKQTLVFYMGLNQ  386 (457)
T ss_dssp             CHHHHHSSSEEEEESSCSSS
T ss_pred             hHHHHhcCCCeEEEEcchhh
Confidence            25566677899999976543

>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1

Probab=99.95  E-value=4.6e-28  Score=195.52  Aligned_cols=159  Identities=15%  Similarity=0.109  Sum_probs=103.2

Q ss_pred             CEEEEecCCCCcc---chhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHH-hCCc-----cccCChHHHHHHHH
Q 030179            1 MLYIIGLGLGDER---DITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKP-----IALADREMVEEKAD   71 (181)
Q Consensus         1 ~l~iVG~GpG~~~---~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~-~~~~-----~~~~~~~~~~~~~~   71 (181)
                      |||+||+|||||+   +||+||+++|++||+|+++++..      +.+   .++.+ ..++     .....+..+++.++
T Consensus         4 ~ly~VG~GpGd~~~~dLlTlrA~~~L~~aDvI~~~~~~~------~~~---ll~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (242)
T 1wyz_A            4 ALYLLPVTLGDTPLEQVLPSYNTEIIRGIRHFIVEDVRS------ARR---FLKKVDREIDIDSLTFYPLNKHTSPEDIS   74 (242)
T ss_dssp             SEEEECCCSSSSCHHHHSCTHHHHHHTTCCEEEESCHHH------HHH---HHHHHCSSSCTTCCCCEECCSSCCHHHHH
T ss_pred             eEEEEecCCCCCcccCccCHHHHHHHHhCCEEEEeCCcc------hHH---HHHhcCCCCceeeeeeecccccCHHHHHH
Confidence            6999999999998   79999999999999999975421      122   22222 1111     11111223355567


Q ss_pred             HHHHHccC-CCEEEEe-cCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCC
Q 030179           72 KILSESQE-SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPG  148 (181)
Q Consensus        72 ~i~~~~~~-~~V~~l~-~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~  148 (181)
                      .+++.+++ ++|++++ .|||++|+++.++++++++.|++++++|||||++++ |++|+|++++    .+.  +.+.++.
T Consensus        75 ~i~~~~~~G~~Va~ls~~GdP~i~~~g~~l~~~l~~~gi~vevIPGiSs~~aa~a~~G~p~~~f----~~~--g~~p~~~  148 (242)
T 1wyz_A           75 GYLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPSSIILSVMASGFNGQSF----AFH--GYLPIEP  148 (242)
T ss_dssp             HHHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHTSCSSSE----EEE--EECCSST
T ss_pred             HHHHHHHcCCEEEEEecCCCCcccCcHHHHHHHHHHCCCCEEEeCcHHHHHHHHHHcCCCCCeE----EEE--EEcCCCc
Confidence            77777766 7999997 899999999999999999999999999999999875 8999997754    221  2121111


Q ss_pred             ChHHHHHHHhcCC----CceEEEEcceeee
Q 030179          149 SFYEKIKRNRSLG----LHTLCLLGGVTLC  174 (181)
Q Consensus       149 ~~~~~i~~~~~~~----~~tlvlld~~~~~  174 (181)
                      ......++.+...    .+|+||++...++
T Consensus       149 ~~~~~~l~~l~~~~~~~~~t~vl~~~~~~~  178 (242)
T 1wyz_A          149 GERAKKLKTLEQRVYAESQTQLFIETPYRN  178 (242)
T ss_dssp             THHHHHHHHHHHHHHHHTCEEEEEECGGGH
T ss_pred             cchHHHHHHHhcccccCCCeEEEEEcHHHH
Confidence            1111233344443    6999999865443

>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae}

Probab=99.95  E-value=1.5e-27  Score=193.33  Aligned_cols=135  Identities=23%  Similarity=0.394  Sum_probs=96.6

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCccc---ccccccccchhhhhHHHh-CCccc-cC----Ch--------
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTS---LLSFGLSTDGLSTLEKLY-GKPIA-LA----DR--------   63 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~---~l~~g~~~~~l~~~~~~~-~~~~~-~~----~~--------   63 (181)
                      |||+||+|||||++||++|+++|++||+|+++....   .+.. ...+   .++.+. ++++. +.    ++        
T Consensus         4 ~l~vVG~GpGd~~lLTl~A~~~L~~Advv~~~~~~~~~~~l~~-~~~~---il~~~~~~~~~~~~~~p~~~~~~~~~~~~   79 (251)
T 2npn_A            4 TIYVIGIGTGSPEFLTLQAISGLRHAQAIVALDKGEQKSDLLA-LRQK---IVDTHAPGTPIYAVTDPERDRNPDNYEEE   79 (251)
T ss_dssp             EEEEEECBSSCGGGCCHHHHHHHHHCSEEEEEC---CCHHHHH-HHHH---HHHHHSTTCCEEEECC----------CHH
T ss_pred             EEEEEEeCCCChhHhhHHHHHHHHhCCEEEEeCCCCCchhhhh-hHHH---HHHHHhCCCEEEEecCCCcccchhhhhhh
Confidence            599999999999999999999999999999974310   0100 0011   233222 22221 10    00        


Q ss_pred             -----HHHHHHH-HHHHHHccC-CCEEEEecCCccccccHHHHHHHHHhCC---CcEEEECCccHHHHH-HHcCCCcccC
Q 030179           64 -----EMVEEKA-DKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLG---IQVKAVHNASVMNAV-GICGLQLYRF  132 (181)
Q Consensus        64 -----~~~~~~~-~~i~~~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g---~~v~iiPGiSs~~a~-a~~g~~l~~~  132 (181)
                           ...++.. +.+.+.+++ ++|++|++|||++|+++.++++.+.+.|   ++++++|||||++++ |++|+||+++
T Consensus        80 ~~~~~~~~~~~~~~~i~~~~~~g~~Vv~l~~GDP~iy~~~~~l~~~l~~~g~~~i~veviPGiSs~~aa~a~~g~pl~~~  159 (251)
T 2npn_A           80 VRRWHAERAHLLASTIRERTPDDGAVAFLVWGDPSLYDSTLRIIEHMRNLEDLHADVKVIPGITAVQVLTAEHGILINRI  159 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCTTCEEEEEESBCTTSSCCHHHHHHHHHHHHTCCEEEEEECCCCHHHHHHHHHTCCSSCT
T ss_pred             hhhhhhhHHHHHHHHHHHHHHCCCeEEEEeCCCcccccCHHHHHHHHHhcCCCCCcEEEeCChhHHHHHHHHcCCCcCCC
Confidence                 1222333 356566655 7999999999999999999999998766   899999999999975 8999999997


Q ss_pred             CceeEEe
Q 030179          133 GETVSIP  139 (181)
Q Consensus       133 ~~~~~v~  139 (181)
                      .+.+.++
T Consensus       160 ~~~~~~~  166 (251)
T 2npn_A          160 GEAIHIT  166 (251)
T ss_dssp             TCCCEEE
T ss_pred             CCeEEEE
Confidence            7666665

>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}

Probab=99.95  E-value=1e-27  Score=198.89  Aligned_cols=158  Identities=15%  Similarity=0.141  Sum_probs=115.8

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHH-hCCccc-cCChHHHHHHHHHHHHHcc
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKPIA-LADREMVEEKADKILSESQ   78 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~-~~~~~~-~~~~~~~~~~~~~i~~~~~   78 (181)
                      +||+||+||||+++||++|+++|++||+|++++..      ...+   .++.+ .+++.. ++ ..+.++..+.+++.++
T Consensus        17 ~LylVG~GpG~~~~lT~rA~~~L~~aDvI~~edtr------~~~~---lL~~~~~~~~~i~~~-~~~~~~~~~~li~~l~   86 (296)
T 3kwp_A           17 HLYLVPTPIGNLDDMTFRAVKTLTAVDLIAAEDTR------NTQK---LLNHFEITTKQISFH-EHNTQERIPQLIAKLK   86 (296)
T ss_dssp             EEEECCBCSSCGGGCCHHHHHHHHHSSEEEESCHH------HHHH---HHHHTTCCCEEEECS-TTTHHHHHHHHHHHHH
T ss_pred             eEEEeccCCCCccchhhHHHHHHhHhhhhhhhccc------cHHH---Hhhheeeeeeeeehh-hcchhhHhHHHHHHHh
Confidence            48999999999999999999999999999997531      0112   22222 122222 22 2234566677877776


Q ss_pred             C-CCEEEEe-cCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHH
Q 030179           79 E-SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIK  155 (181)
Q Consensus        79 ~-~~V~~l~-~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~  155 (181)
                      + ++|++++ +|||++|+++.++++.+.+.|++++++|||||++++ +++|+||+.|    .+  .+.+.+........+
T Consensus        87 ~G~~Va~lsdaGdP~i~~~g~~lv~~~~~~gi~v~viPGiSA~~aA~a~~Glp~~~f----~f--~g~~p~~~~~r~~~l  160 (296)
T 3kwp_A           87 QGMQIAQVSDAGMPSISDPGHELVNACIDAHIPVVPLPGANAGLTALIASGLAPQPF----YF--YGFLDRKPKDRKAEI  160 (296)
T ss_dssp             TTCEEEEECSSBCTTSSHHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHSSCCSSE----EE--EEECCSSHHHHHHHH
T ss_pred             cCceEEEeccCCCCCCCCCchHHHHHHHHcCCCeeeCCCcccchHHHHhccCCCCce----eE--EeeccCCcHHHHHHH
Confidence            5 7999998 999999999999999999999999999999999875 9999999754    22  222322111123457


Q ss_pred             HHhcCCCceEEEEcceeee
Q 030179          156 RNRSLGLHTLCLLGGVTLC  174 (181)
Q Consensus       156 ~~~~~~~~tlvlld~~~~~  174 (181)
                      +.+....+|+||++-..|+
T Consensus       161 ~~l~~~~~tlV~y~~~~rl  179 (296)
T 3kwp_A          161 AGLAQRPETLIFYEAPHRL  179 (296)
T ss_dssp             HTTTTCCSEEEEEECGGGH
T ss_pred             HHhhcCCceeEeeeCcHHH
Confidence            7777888999999876654

>2zvb_A Precorrin-3 C17-methyltransferase; plasmid, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SAH; 2.00A {Thermus thermophilus} PDB: 2zvc_A*

Probab=99.95  E-value=2.1e-27  Score=196.88  Aligned_cols=154  Identities=19%  Similarity=0.218  Sum_probs=107.9

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHH--h-CCccccCChHHHHHHHHHHHHHc
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL--Y-GKPIALADREMVEEKADKILSES   77 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~--~-~~~~~~~~~~~~~~~~~~i~~~~   77 (181)
                      |||+||+|||||++||++|+++|++||+|++.+.           .++.+..+  . ++++.......-.+..+.+++.+
T Consensus         3 ~l~lVG~GpGdp~lLT~rA~~~L~~ADvVig~~~-----------~l~ll~~~~~~~~k~~~~~~~~~e~~~~~~~l~~a   71 (295)
T 2zvb_A            3 ELFLVGMGPGDLPGLTQRAREALEGAEVVIGYST-----------YVKLLEEMGLLAGKEVVRKGMTEELDRAEEALERA   71 (295)
T ss_dssp             EEEEEECBTSSGGGSCHHHHHHHHHCSEEECCHH-----------HHHHHHHHTCCTTSEEECTTCCSHHHHHHHHHHHH
T ss_pred             EEEEEECCCCChHHHHHHHHHHHHcCCEEEEeCc-----------HHHHHHHhhccCCCEEEecCCchHHHHHHHHHHHH
Confidence            5999999999999999999999999999996421           12233333  1 33322111111123445555655


Q ss_pred             cC-CCEEEEecCCccccccHHHHHHHHHhC--------------------CCcEEEECCccHHHHH-HHcCCCcccCCce
Q 030179           78 QE-SNVAFLVVGDPFGATTHTDLVVRAKKL--------------------GIQVKAVHNASVMNAV-GICGLQLYRFGET  135 (181)
Q Consensus        78 ~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~--------------------g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~  135 (181)
                      ++ ++|++|++|||++|+++.++.+.+++.                    |++++++|||||++++ |++|+||++.   
T Consensus        72 ~~G~~Va~L~~GDP~~yg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~gi~veVIPGiSS~~aaaA~lG~plt~~---  148 (295)
T 2zvb_A           72 LSGQRVALVSGGDPGIYGMAAPVLELMEERGLKRVDGGVGLPGRFAGEEGEVFLAVIPGVTAANAVASLLGSPLAHD---  148 (295)
T ss_dssp             HTTCEEEEEESBCTTSSSSHHHHHHHHHHTTCEECSCCCSSSEEEEETTEEEEEEEECCCCHHHHHHHTTEETTSSC---
T ss_pred             HCCCcEEEEeCCCCChhhhHHHHHHHHHHhcccccccccccccccccccCCCcEEEECCHhHHHHHHHHhCCCccCC---
Confidence            55 799999999999999999999988765                    4899999999999975 8999999653   


Q ss_pred             eEEecccCCCCCCChHHHHHH---HhcCCCceEEEEcce
Q 030179          136 VSIPFFTETWRPGSFYEKIKR---NRSLGLHTLCLLGGV  171 (181)
Q Consensus       136 ~~v~~~~~~~~~~~~~~~i~~---~~~~~~~tlvlld~~  171 (181)
                        +.+.+.|++. .+++.+.+   +...+.+|+||++.+
T Consensus       149 --~~~is~~~~~-~~~~~l~~~l~~~~~~~~t~vl~~~~  184 (295)
T 2zvb_A          149 --TCLISLSDLL-TPWPLIERRLHAAGQGDFVVVLYNPQ  184 (295)
T ss_dssp             --EEEEECCCTT-SCHHHHHHHHHHHHHTTCEEEEESCC
T ss_pred             --CeEEeCCCCC-CCHHHHHHHHHHhhcCCcEEEEEcCC
Confidence              2334455531 12554433   334467899999853

>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus}

Probab=99.94  E-value=8.7e-27  Score=191.44  Aligned_cols=162  Identities=20%  Similarity=0.253  Sum_probs=109.6

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCccc---ccccccccchhhhhHHHh-C--Cccc-c----CC-------
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTS---LLSFGLSTDGLSTLEKLY-G--KPIA-L----AD-------   62 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~---~l~~g~~~~~l~~~~~~~-~--~~~~-~----~~-------   62 (181)
                      +||+||+|||||++||+||+++|++||+|++++...   .+.. ++.+   .++.+. .  .++. +    .+       
T Consensus        23 ~ly~VG~GPGdpellTlrA~~~L~~aDvI~~~~t~~~~~~l~~-~a~~---il~~~~~~~~~~~i~~~~pm~~~~~~~Y~   98 (275)
T 3nd1_A           23 ELSLIGIGTGNPRHITGQAVDAMNAADLILIPLKGADKSDLAG-LRRQ---ICAAHLTNPATKVIDFALPVRDASNPSYR   98 (275)
T ss_dssp             EEEEEECBSSCGGGCBHHHHHHHHHCSEEEEECCCSCGGGCHH-HHHH---HHHHHCCCTTCEEEEECCCCC--------
T ss_pred             EEEEEEeCCCCHHHHHHHHHHHHHhCCEEEecCCcccchhhhh-hHHH---HHHHhhcccCcEEEEecCCccccccchhh
Confidence            389999999999999999999999999999986531   1100 0122   344332 1  1211 1    00       


Q ss_pred             ------hHHHH-HHHHHHHHHccC--CCEEEEecCCccccccHHHHHHHHHh-CCCcEEEECCccHHHHH-HHcCCCccc
Q 030179           63 ------REMVE-EKADKILSESQE--SNVAFLVVGDPFGATTHTDLVVRAKK-LGIQVKAVHNASVMNAV-GICGLQLYR  131 (181)
Q Consensus        63 ------~~~~~-~~~~~i~~~~~~--~~V~~l~~GDP~~~~~~~~l~~~~~~-~g~~v~iiPGiSs~~a~-a~~g~~l~~  131 (181)
                            .+..+ .+.+.+.+.+++  ++|++|++|||++|+++.++++.+.+ .|++++++|||||++++ |++|+||++
T Consensus        99 ~~~~~~~~~~~~~~~~~i~~~l~~~G~~Va~l~~GDP~i~~~~~~l~~~l~~~~gi~veviPGiSs~~aa~a~~g~pl~~  178 (275)
T 3nd1_A           99 KGVDDWHDAIAETWLSEITAHVPGLEGRVALLVWGDPSLYDSTLRIAERLKSRLPLTTKVIPGITAIQALCAAHAIPLND  178 (275)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHCTTSCEEEEEEESBCTTSSCSHHHHHHTTTTTSSEEEEEECCCCHHHHHHHHHTCCSSC
T ss_pred             hhhhhhhHhHHHHHHHHHHHHHHhCCCeEEEEeCCCCcccchHHHHHHHHHHhcCCCEEEecCccHHHHHHHHcCCCCcc
Confidence                  01112 234456677765  58999999999999999999999887 79999999999999975 899999999


Q ss_pred             CCceeEEecccCCCCCCChHHHHHHHhcCCCceEEEEcceeee
Q 030179          132 FGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLGGVTLC  174 (181)
Q Consensus       132 ~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~~~tlvlld~~~~~  174 (181)
                      +++.+.++...    .   .+. .+.+.....++||++-..++
T Consensus       179 ~~~~~~~l~g~----~---~~~-~~~~~~~~~~vvl~~~~~~l  213 (275)
T 3nd1_A          179 IGAPVVITTGR----Q---LRD-HGWPAGTETVVAMLDGECSF  213 (275)
T ss_dssp             TTCCEEEEEHH----H---HHH-HCSCTTCSEEEEESCSSCGG
T ss_pred             CCcEEEEEcCC----C---cch-HHHHhCCCCEEEEECCcccH
Confidence            86666654422    1   111 11223344566777665443

>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1

Probab=99.94  E-value=1.9e-27  Score=189.60  Aligned_cols=148  Identities=18%  Similarity=0.192  Sum_probs=99.4

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      |+|+||+||| |++||++|+++|++||+|+++.           ++++.+..+. .+...+.  ..+++.++.+.+..++
T Consensus        23 ~l~lVG~GpG-p~lLTlrA~~~L~~AdvI~~~~-----------~~l~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~g   88 (221)
T 2bb3_A           23 MIWIVGSGTC-RGQTTERAKEIIERAEVIYGSR-----------RALELAGVVDDSRARILR--SFKGDEIRRIMEEGRE   88 (221)
T ss_dssp             EEEEEECBSS-TTCCCHHHHHHHHHCSEEEECH-----------HHHHHTTCTTCTTEEECS--CCSHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCC-hhHhHHHHHHHHHhCCEEEECH-----------HHHHHhhhhcCCceEecc--chHHHHHHHHHHhcCC
Confidence            6899999999 9999999999999999999842           2222333322 1222121  2234555566543344


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHh
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR  158 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~  158 (181)
                      ++|++|++|||++|+.+..+ .++ ..+++++++|||||++++ |++|+||++      +.+.+.|+++..  +. ++.+
T Consensus        89 ~~Vv~L~~GDP~i~~~~~~l-~~~-~~~i~veviPGiSS~~aa~a~~g~pl~~------~~~vs~~~r~~~--~~-l~~l  157 (221)
T 2bb3_A           89 REVAVISTGDPMVAGLGRVL-REI-AEDVEIKIEPAISSVQVALARLKVDLSE------VAVVDCHAKDFD--AE-LTEL  157 (221)
T ss_dssp             SCEEEEESBCTTTTTSHHHH-HTS-CCSSEEEEECCCCHHHHHHHHHTCCGGG------EEEEEC----CC--HH-HHTH
T ss_pred             CcEEEEeCCCCccccCHHHH-HHh-cCCCCEEEECCHHHHHHHHHHhCCCcee------EEEEeecCCCch--HH-HHHH
Confidence            89999999999999977654 334 358999999999999975 899999996      334456666432  12 2223


Q ss_pred             cCCCceEEEEcceee
Q 030179          159 SLGLHTLCLLGGVTL  173 (181)
Q Consensus       159 ~~~~~tlvlld~~~~  173 (181)
                      .....++++++.+.+
T Consensus       158 ~~~~~~vvl~~~~~~  172 (221)
T 2bb3_A          158 LKYRHLLILADSHFP  172 (221)
T ss_dssp             HHHCEEEEEECTTCC
T ss_pred             hcCCeEEEEECCCCC
Confidence            333488888886654

>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural genomics, APC62130.1, methyltransferase, PSI-2, P structure initiative; 2.00A {Bacteroides fragilis} PDB: 3fq6_A

Probab=96.10  E-value=0.0055  Score=43.17  Aligned_cols=54  Identities=15%  Similarity=0.068  Sum_probs=36.5

Q ss_pred             CCccHHHH-HHHcCCCcccCCceeEEecccCCCCCCC-hHHHHHHHhcCCCceEEEEcceeeee
Q 030179          114 HNASVMNA-VGICGLQLYRFGETVSIPFFTETWRPGS-FYEKIKRNRSLGLHTLCLLGGVTLCV  175 (181)
Q Consensus       114 PGiSs~~a-~a~~g~~l~~~~~~~~v~~~~~~~~~~~-~~~~i~~~~~~~~~tlvlld~~~~~~  175 (181)
                      ||+||+.+ ++.+|+|.+.|      .|.  ++.|.+ -....++.+.....|+||++-.+|+.
T Consensus         1 PG~sA~~~Al~~sGlp~~~F------~F~--Gflp~~~~r~~~l~~la~~~~TlVfyesp~Rl~   56 (115)
T 3ffy_A            1 SNATAFVPALVASGLPNEKF------CFE--GFLPQKKGRMTKLKSLVDEHRTMVFYESPHRLL   56 (115)
T ss_dssp             -CTTTHHHHHHHTTSCCSSE------EEE--ESCCSSTTHHHHHHHTTTCCSEEEEEECTTTHH
T ss_pred             CchhHHHHHHHHcCCCCCcE------EEE--eeCCCCccHHHHHHHHhCCCCeEEEEechHHHH
Confidence            89999765 59999997753      232  222221 13445777888889999999887764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	181
d1wdea_	289	c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum	1e-41
d2deka1	265	c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyroc	8e-40
d1vhva_	251	c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon A	2e-36
d1cbfa_	239	c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase	2e-09
d1s4da_	265	c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase	3e-09
d1pjqa2	242	c.90.1.1 (A:216-457) Siroheme synthase CysG, domai	4e-09
d2bb3a1	195	c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Ar	2e-08
d1ve2a1	235	c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransf	5e-08
d1va0a1	225	c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {	1e-05

>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]} Length = 289

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Aeropyrum pernix [TaxId: 56636]

 Score =  139 bits (350), Expect = 1e-41
 Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 5/169 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
            L ++G G       TL  L+AV++ D VY+E+YT   S  L    +   E      +  
Sbjct: 4   TLLLVGWGYAPG-MQTLEALDAVRRADVVYVESYTMPGSSWLYKSVV---EAAGEARVVE 59

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS-VM 119
           A R  +EE++ +I+S + ++ VA +  GDP  ATTH+ L   A + G+ V+ +   S V 
Sbjct: 60  ASRRDLEERSREIVSRALDAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQ 119

Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
            A G   L  YRFG TV++P       P S   +I  N   GLHT  LL
Sbjct: 120 AARGATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNLCAGLHTTALL 168

>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]} Length = 265

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Pyrococcus horikoshii [TaxId: 53953]

 Score =  134 bits (337), Expect = 8e-40
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57

Query: 61  ADREMVEEKADKILSES-QESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I+    +E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117

Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLL 168
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  L
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFL 166

>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 251

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score =  125 bits (314), Expect = 2e-36
 Identities = 58/171 (33%), Positives = 100/171 (58%), Gaps = 10/171 (5%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +L  +GLGL D +DI+++GLEAV++ D+VY+E YTS L        +  +E+ +GK +  
Sbjct: 2   LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKL-----LSSIEEMEEFFGKRVVE 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            +R  +EE + +++  ++  +V  LV GDP  ATTH+ + + A++ G++ + +H AS+  
Sbjct: 57  LERSDLEENSFRLIERAKSKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASIST 116

Query: 121 -AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLGG 170
              G+ GL  YRFG++ ++ +        +    IK NRS+  HTL  L  
Sbjct: 117 AVCGLTGLHNYRFGKSATVSWHR----SQTPVNVIKANRSIDAHTLLFLDL 163

>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]} Length = 239

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Cobalt precorrin-4 methyltransferase CbiF
species: Bacillus megaterium [TaxId: 1404]

 Score = 53.0 bits (126), Expect = 2e-09
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 8/153 (5%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           LYIIG G GD   IT++GL+ +++ D V            L +  L    K   + +  A
Sbjct: 11  LYIIGAGPGDPDLITVKGLKLLQQADVVLYADS-------LVSQDLIAKSKPGAEVLKTA 63

Query: 62  DREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA 121
              + E     +    +   V  +  GDP       + +V  K+ G+ ++ V   + + A
Sbjct: 64  GMHLEEMVGTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFA 123

Query: 122 VGIC-GLQLYRFGETVSIPFFTETWRPGSFYEK 153
                  +L     T ++       R      +
Sbjct: 124 AAAAAEAELTIPDLTQTVILTRAEGRTPVPEFE 156

>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]} Length = 265

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Pseudomonas denitrificans [TaxId: 43306]

 Score = 52.6 bits (125), Expect = 3e-09
 Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 3/154 (1%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           ++++G G GD   +TL    A+++ D   I     +    L       + +  GK     
Sbjct: 12  VWLVGAGPGDPGLLTLHAANALRQAD--VIVHDALVNEDCLKLARPGAVLEFAGKRGGKP 69

Query: 62  DREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA 121
             +  +     +      + V  L  GDPF      +  +   +  +  + V   +    
Sbjct: 70  SPKQRDISLRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIG 129

Query: 122 V-GICGLQLYRFGETVSIPFFTETWRPGSFYEKI 154
                G+ +       ++ F T     G   ++I
Sbjct: 130 GLAYAGIPVTHREVNHAVTFLTGHDSSGLVPDRI 163

>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]} Length = 242

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Siroheme synthase CysG, domains 4 and 5
species: Salmonella typhimurium [TaxId: 90371]

 Score = 51.9 bits (123), Expect = 4e-09
 Identities = 34/177 (19%), Positives = 60/177 (33%), Gaps = 5/177 (2%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           + ++G G GD   +TL+GL+ +++ D V    Y  L+S  +        ++++    A  
Sbjct: 3   VVLVGAGPGDAGLLTLKGLQQIQQADIV---VYDRLVSDDIMNLVRRDADRVFVGKRAGY 59

Query: 62  DREMVEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
                EE    +L E+Q+   V  L  GDPF      + +      GI    V   +  +
Sbjct: 60  HCVPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAAS 119

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLGGVTLCVDH 177
                        +         T    +  E    N +    TL    G+      
Sbjct: 120 GCSAYSGIPLTHRDYAQSVRLV-TGHLKTGGELDWENLAAEKQTLVFYMGLNQAATI 175

>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]} Length = 195

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Precorrin-6y methylase CbiE
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 49.4 bits (117), Expect = 2e-08
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 13/125 (10%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           M++I+G G       T R  E +++ + +Y       L           L  +     A 
Sbjct: 1   MIWIVGSGTCRG-QTTERAKEIIERAEVIY--GSRRALE----------LAGVVDDSRAR 47

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             R    ++  +I+ E +E  VA +  GDP  A     L   A+ + I+++   ++  + 
Sbjct: 48  ILRSFKGDEIRRIMEEGREREVAVISTGDPMVAGLGRVLREIAEDVEIKIEPAISSVQVA 107

Query: 121 AVGIC 125
              + 
Sbjct: 108 LARLK 112

>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]} Length = 235

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Thermus thermophilus [TaxId: 274]

 Score = 48.7 bits (115), Expect = 5e-08
 Identities = 29/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           +Y++G G G    +TL+ L  ++  + V    +  L+  G+            GK     
Sbjct: 5   VYLVGAGFGGPEHLTLKALRVLEVAEVV---LHDRLVHPGV-LALAKGELVPVGKEGYGG 60

Query: 62  DREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA 121
                   A  I    +   VA L  GDP       +  +  ++ GI  + V   +    
Sbjct: 61  KTPQEAITARLIALAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVG 120

Query: 122 V-GICGLQLYRFGETVSIPFFTETWRPGSFYE 152
                GL L   G   S    T          
Sbjct: 121 ALSALGLPLTHRGLARSFAVATGHDPALPLPR 152

>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]} Length = 225

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Hypothetical protein TTHA0667
species: Thermus thermophilus [TaxId: 274]

 Score = 41.5 bits (96), Expect = 1e-05
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 2  LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTS 36
          +Y++G G GD   +TL+    +K+   V  +    
Sbjct: 3  VYLVGAGPGDPELLTLKAYRLLKEAPVVLYDRLVD 37

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	181
d1vhva_	251	Diphthine synthase, DphB {Archaeon Archaeoglobus f	100.0
d1wdea_	289	Diphthine synthase, DphB {Aeropyrum pernix [TaxId:	100.0
d2deka1	265	Diphthine synthase, DphB {Pyrococcus horikoshii [T	100.0
d2bb3a1	195	Precorrin-6y methylase CbiE {Archaeoglobus fulgidu	99.95
d1ve2a1	235	Uroporphyrin-III C-methyltransferase (SUMT, UROM,	99.94
d1s4da_	265	Uroporphyrin-III C-methyltransferase (SUMT, UROM,	99.94
d1cbfa_	239	Cobalt precorrin-4 methyltransferase CbiF {Bacillu	99.94
d1pjqa2	242	Siroheme synthase CysG, domains 4 and 5 {Salmonell	99.92
d1va0a1	225	Hypothetical protein TTHA0667 {Thermus thermophilu	99.85
d1wyza1	233	Putative methytransferase BT4190 {Bacteroides thet	99.82

>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=7.4e-35  Score=234.46  Aligned_cols=166  Identities=36%  Similarity=0.635  Sum_probs=137.2

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHHHHccCC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   80 (181)
                      |+|+||+|||||++||+||+++|++||+|+++.+++.+.     ...+.+..+++++....++..+++..+.+.+.++++
T Consensus         2 mL~iVG~GpG~~~~iT~~a~~~l~~advv~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   76 (251)
T d1vhva_           2 LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKLL-----SSIEEMEEFFGKRVVELERSDLEENSFRLIERAKSK   76 (251)
T ss_dssp             EEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCCS-----SCHHHHHHHHTSCCEEECHHHHTTTHHHHHHHHTTS
T ss_pred             eEEEEeeCCCCHHHHHHHHHHHHHcCCEEEEcCCCccch-----hcHHHHHHHhCCccccCcchhHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999999998875432     112244455555554445556666677777777778


Q ss_pred             CEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHhc
Q 030179           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (181)
Q Consensus        81 ~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~  159 (181)
                      +|++|++|||++|+++.++++.+.++|++++++|||||++++ |++|+||++++...++.+..    +.++++.++.+..
T Consensus        77 ~vv~L~~GDP~i~~~~~~l~~~~~~~gi~vevvPGiSs~~aaaa~~gl~~~~~~~~~~i~~~~----~~~~~~~i~~~~~  152 (251)
T d1vhva_          77 SVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCGLTGLHNYRFGKSATVSWHR----SQTPVNVIKANRS  152 (251)
T ss_dssp             EEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHCCCGGGBCCCEEECSSC----CSHHHHHHHHHHH
T ss_pred             cEEEEecCCccccchHHHHHHHHHHcCCCcEEEecchHHHHHHHHhCCCccccceeEeeeccC----CCCchhhHHHHHh
Confidence            999999999999999999999999999999999999999975 89999999999888886533    3455889999999


Q ss_pred             CCCceEEEEcceeeee
Q 030179          160 LGLHTLCLLGGVTLCV  175 (181)
Q Consensus       160 ~~~~tlvlld~~~~~~  175 (181)
                      .+.||+|+++..++.+
T Consensus       153 ~~~~Tlv~~~~~~~~~  168 (251)
T d1vhva_         153 IDAHTLLFLDLHPEPM  168 (251)
T ss_dssp             TTCBEEEEECCSSSCC
T ss_pred             cCCCcEEEeccccccc
Confidence            9999999998776543

>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=1.6e-34  Score=236.96  Aligned_cols=168  Identities=33%  Similarity=0.422  Sum_probs=139.1

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhh-HHHhCCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTL-EKLYGKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      |||+||+||| +++||+||+++|++||+|+++++++...    ....+.+ +...+++....++...++..+.+++.+++
T Consensus         4 ~l~iVGlGpG-~eliTlrA~~~L~~aDvI~~e~~~~~~~----~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~i~~~a~~   78 (289)
T d1wdea_           4 TLLLVGWGYA-PGMQTLEALDAVRRADVVYVESYTMPGS----SWLYKSVVEAAGEARVVEASRRDLEERSREIVSRALD   78 (289)
T ss_dssp             EEEEEECBSS-TTCCCHHHHHHHHHCSEEEEECSSSTTC----HHHHHHHHHHHTSSSEEECCHHHHHTSHHHHTCCSSC
T ss_pred             EEEEEEeccC-chHHHHHHHHHHHcCCEEEEccCCchhh----hhhhhhhhhhccCCceeccccchHHHHHHHHHHHhcC
Confidence            6899999999 5999999999999999999998764311    1111122 22234444333455556667777777777


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHh
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR  158 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~  158 (181)
                      ++|++|++|||++|+++.++++++++.|+++++||||||+++| |++|+|+++|+.+.++++.+.+++|.++++.++.++
T Consensus        79 ~~va~L~~GDP~i~~~~~~l~~~~~~~gi~v~vIPGiSs~~aA~a~~Gl~~~~f~~~~sl~~~~~~~~p~s~~~~i~~~~  158 (289)
T d1wdea_          79 AVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNL  158 (289)
T ss_dssp             CEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTCCGGGEEEEEEECCGGGCCCCHHHHHHHHHHH
T ss_pred             CCeEEEeCCCCcccccHHHHHHHHHhcCCcEEEECCHhHHHHHHHHhCCCcccccEEEEeeeecCCcCCCchHHHHHHHH
Confidence            8999999999999999999999999999999999999999875 899999999999999998888989988899999999


Q ss_pred             cCCCceEEEEcceee
Q 030179          159 SLGLHTLCLLGGVTL  173 (181)
Q Consensus       159 ~~~~~tlvlld~~~~  173 (181)
                      ..++||++++|+++.
T Consensus       159 ~~~l~tlvl~~~~~~  173 (289)
T d1wdea_         159 CAGLHTTALLDVDER  173 (289)
T ss_dssp             HHTCEEEEEECBCTT
T ss_pred             HcCCchhhhhhcccc
Confidence            999999999998764

>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=5e-33  Score=225.34  Aligned_cols=168  Identities=46%  Similarity=0.786  Sum_probs=139.8

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHH-HHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKIL-SESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~   79 (181)
                      |||+||+|||||++||+||+++|++||+|+|+.+++.+.    ....+.+..+.+++.....+..+++..++++ +.+++
T Consensus         2 ~Ly~VG~GPG~pe~lT~~A~~~l~~aDvV~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   77 (265)
T d2deka1           2 VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRVLSREDVELNFENIVLPLAKE   77 (265)
T ss_dssp             EEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCCT----TCCHHHHHHHHTSCCEEECHHHHHHHHHHHTHHHHTT
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHCCCEEEECCCCCccc----HHHHHHHHHhcCCceeccCcchHHHHHHHHHHHHHcC
Confidence            799999999999999999999999999999998876432    2222355555555554444555555555544 44455


Q ss_pred             CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHHHHcCCCcccCCceeEEecccCCCCCCChHHHHHHHhc
Q 030179           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (181)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~  159 (181)
                      ++|++|++|||++|+++.++.+++++.|++++++||||+++|+|++|.+..+++...++.+.+.+..|.++++.+..+..
T Consensus        78 ~~V~~l~~GDP~~~~~~~~l~~~~~~~~i~vevvPGiSs~~Aaaa~g~~~~~~~~~~s~~~~~~~~~~~~~~e~i~~~~~  157 (265)
T d2deka1          78 NDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAE  157 (265)
T ss_dssp             SEEEEEESBCTTTTSSTHHHHHHHHHTTCEEEEECCCCHHHHGGGGTCCGGGBCCCEEECCCBTTBCCCHHHHHHHHHHH
T ss_pred             CCEEEEecCccccchhHHHHHHHHHhcCCCceecCCccHHHHHHHhCCCccccCceEEEEEeecCCcCCcchhhHHHHHH
Confidence            89999999999999999999999999999999999999998888888888889999999999989899889999999999


Q ss_pred             CCCceEEEEccee
Q 030179          160 LGLHTLCLLGGVT  172 (181)
Q Consensus       160 ~~~~tlvlld~~~  172 (181)
                      .+.+++++++...
T Consensus       158 ~~~~~~~~~~~~~  170 (265)
T d2deka1         158 RGLHTLLFLDIKA  170 (265)
T ss_dssp             HTCBEEEEECEEG
T ss_pred             cCCchhhhhhhcC
Confidence            9999999997653

>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Precorrin-6y methylase CbiE
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.95  E-value=1.9e-29  Score=194.70  Aligned_cols=148  Identities=18%  Similarity=0.205  Sum_probs=104.1

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCCccccCChHHHHHHHHHHHHHccCC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   80 (181)
                      |||+||+|||+++ ||+||+++|++||+|+++.           ++++.+..+...+...... ..++....+....+++
T Consensus         1 mi~~vG~GpG~~~-lT~rA~~~l~~advv~g~~-----------~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~   67 (195)
T d2bb3a1           1 MIWIVGSGTCRGQ-TTERAKEIIERAEVIYGSR-----------RALELAGVVDDSRARILRS-FKGDEIRRIMEEGRER   67 (195)
T ss_dssp             EEEEEECBSSTTC-CCHHHHHHHHHCSEEEECH-----------HHHHHTTCTTCTTEEECSC-CSHHHHHHHHHHHHHS
T ss_pred             CEEEEecCCCChH-HHHHHHHHHHhCCEEEECc-----------hHHhhhhcccCCeEEecCC-ccHHHHHHHHHHHcCC
Confidence            8999999999986 8999999999999999853           3333333322222211111 1122233444445568


Q ss_pred             CEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHHhc
Q 030179           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (181)
Q Consensus        81 ~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~  159 (181)
                      +|++|++|||++||++.++.+++.  +.+++++|||||+|++ |++|+||++.      .+.+.|+++   .+...+.+.
T Consensus        68 ~vv~L~~GDP~iy~~~~~l~~~~~--~~~~eviPGiss~~aaaa~~~~p~~~~------~~i~~~~~~---~~~~~~~l~  136 (195)
T d2bb3a1          68 EVAVISTGDPMVAGLGRVLREIAE--DVEIKIEPAISSVQVALARLKVDLSEV------AVVDCHAKD---FDAELTELL  136 (195)
T ss_dssp             CEEEEESBCTTTTTSHHHHHTSCC--SSEEEEECCCCHHHHHHHHHTCCGGGE------EEEEC-------CCHHHHTHH
T ss_pred             CeEEEEcCCCcccchhHHHhhhhc--ccceecCCcchhhhhHHHHhcCCCCCc------EEEecCCCC---hHHHHHHhh
Confidence            999999999999999999887764  4589999999999975 8999999863      233456665   345677777


Q ss_pred             CCCceEEEEccee
Q 030179          160 LGLHTLCLLGGVT  172 (181)
Q Consensus       160 ~~~~tlvlld~~~  172 (181)
                      .+.++++|+|.+.
T Consensus       137 ~~~~~~vl~~~~~  149 (195)
T d2bb3a1         137 KYRHLLILADSHF  149 (195)
T ss_dssp             HHCEEEEEECTTC
T ss_pred             cCCeEEEEeCCcc
Confidence            8889999988543

>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=5.4e-28  Score=190.52  Aligned_cols=136  Identities=21%  Similarity=0.261  Sum_probs=100.7

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHH--Hh-CCccccCChHHHHHHHHHHHHHc
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEK--LY-GKPIALADREMVEEKADKILSES   77 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~i~~~~   77 (181)
                      +||+||+||||||+||++|+++|++||+|+++.+...       +.++....  .. .+.... ....+++..+.+.+.+
T Consensus         4 kl~iVG~GPGdp~~lT~~a~~~L~~aDvV~~~~~~~~-------~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~   75 (235)
T d1ve2a1           4 KVYLVGAGFGGPEHLTLKALRVLEVAEVVLHDRLVHP-------GVLALAKGELVPVGKEGYG-GKTPQEAITARLIALA   75 (235)
T ss_dssp             EEEEEECBSSSGGGSBHHHHHHHHHCSEEEECTTSCH-------HHHTTCCSEEEEC--------CCCHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCCHHHHHHHHHHHHHcCCEEEEECCCCH-------HHHHhhhhhccccceeccc-ccchHHHHHHHHHHHH
Confidence            5899999999999999999999999999999865421       10000000  00 111110 0123455666677777


Q ss_pred             cC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCC
Q 030179           78 QE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET  144 (181)
Q Consensus        78 ~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~  144 (181)
                      ++ ++|+++++|||++|+++.++.+++.+.+++++++|||||++++ |++|+||++++....+...+.+
T Consensus        76 ~~g~~V~~l~~Gdp~~~~~~~~~~~~~~~~~i~veviPGiSs~~aaaa~~g~~~~~~~~~~~~~~~~~~  144 (235)
T d1ve2a1          76 REGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGH  144 (235)
T ss_dssp             HTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHHHHHTTCCSCBTTTBSCEEEEESS
T ss_pred             HcCCeEEEEecccccccchHHHHHHHHhhCCCCEEEeccccHHHhhhhhcCCcccccccccccccccch
Confidence            66 7899999999999999999999998899999999999999975 8999999988766666554443

>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Pseudomonas denitrificans [TaxId: 43306]

Probab=99.94  E-value=1.4e-27  Score=191.84  Aligned_cols=165  Identities=15%  Similarity=0.173  Sum_probs=118.6

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHH----Hh-CCccccCChHHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEK----LY-GKPIALADREMVEEKADKILS   75 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~----~~-~~~~~~~~~~~~~~~~~~i~~   75 (181)
                      +||+||+|||||++||++|+++|++||+|+++.+...       +.++.+..    .. ....... ....++..+.+.+
T Consensus        11 kl~iVG~GPGdp~~iT~~a~~~L~~ADvV~~~~~~~~-------~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   82 (265)
T d1s4da_          11 SVWLVGAGPGDPGLLTLHAANALRQADVIVHDALVNE-------DCLKLARPGAVLEFAGKRGGKP-SPKQRDISLRLVE   82 (265)
T ss_dssp             CEEEEECBSSCTTSSBHHHHHHHHHCSEEEECSCSCT-------TGGGGSSTTCCEEECSCCC--C-CCCHHHHHHHHHH
T ss_pred             EEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEccccCH-------HHHhhcccccEeeecccccccc-cchhHHHHHHHHH
Confidence            5899999999999999999999999999999765421       11111110    00 0111001 1223455666667


Q ss_pred             HccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCCh-HH
Q 030179           76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF-YE  152 (181)
Q Consensus        76 ~~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~-~~  152 (181)
                      .+++ ++|+++++|||++|+++.++.+.+.+.+++++|+|||||++++ +++|+|++..+.+..+.+.+.+.+.... ..
T Consensus        83 ~a~~G~~V~~l~~GDp~~~~~~~~~~~~~~~~~~~~eViPGiss~~aa~a~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~  162 (265)
T d1s4da_          83 LARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHDSSGLVPDR  162 (265)
T ss_dssp             HHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC-------C
T ss_pred             HHHCCCcEEEEecCCcccccchHHHHHHHHhcCCceEEecccccchhhHHHhhhhcccCCCceEEEEecCCCccccccch
Confidence            7766 7999999999999999999999999999999999999999975 8999999998887777777766543221 22


Q ss_pred             HHHHHhcCCCceEEEEcceee
Q 030179          153 KIKRNRSLGLHTLCLLGGVTL  173 (181)
Q Consensus       153 ~i~~~~~~~~~tlvlld~~~~  173 (181)
                      ..+..+.....|+++++-..+
T Consensus       163 ~~l~~~~~~~~~~v~~~~~~~  183 (265)
T d1s4da_         163 INWQGIASGSPVIVMYMAMKH  183 (265)
T ss_dssp             CCHHHHHTTCSEEEEESCSTT
T ss_pred             HHHHHHhccCcceeccchHHH
Confidence            235566677889999876543

>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Cobalt precorrin-4 methyltransferase CbiF
species: Bacillus megaterium [TaxId: 1404]

Probab=99.94  E-value=5.8e-27  Score=184.40  Aligned_cols=161  Identities=22%  Similarity=0.196  Sum_probs=117.0

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHhCC-ccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGK-PIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      +||+||+|||||++||++|+++|++||+|+++++..      .++   .++.+... .........+++..+++.+.+++
T Consensus        10 klyiVG~GpGdp~~lT~~A~~~L~~aDvv~~~~~~~------~~~---ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (239)
T d1cbfa_          10 KLYIIGAGPGDPDLITVKGLKLLQQADVVLYADSLV------SQD---LIAKSKPGAEVLKTAGMHLEEMVGTMLDRMRE   80 (239)
T ss_dssp             EEEEEECBSSCGGGSCHHHHHHHHHCSEEEECTTTS------CHH---HHTTSCTTCEEEECTTCCHHHHHHHHHHHHTT
T ss_pred             EEEEEEECCCCHHHHHHHHHHHHHcCCEEEEeCCcC------CHH---HHhhhcccccccccccchHHHHHHHHHHHhhc
Confidence            489999999999999999999999999999975421      111   12211111 11111112244555556665555


Q ss_pred             -CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCCChHHHHHHH
Q 030179           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRN  157 (181)
Q Consensus        80 -~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~~~~~~i~~~  157 (181)
                       ++|+++++|||++|+++.++..++.+.+++++++|||||++++ +++|++++.++....+.+.+.|++........+..
T Consensus        81 g~~V~~l~~Gdp~~~~~~~~~~~~~~~~~~~~~vipGiss~~~a~a~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (239)
T d1cbfa_          81 GKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGRTPVPEFEKLTD  160 (239)
T ss_dssp             TCCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHTTCCSCBTTTBCCEEEEECCSSSCCCGGGCHHH
T ss_pred             CceEEEeeccccccccccccccccccccceeeEeccCccchhhhhhhcCcccccCcceeeeeeecccCCCccchHHHHHH
Confidence             7999999999999999999999999999999999999999975 89999999988888888878887754332333444


Q ss_pred             hcCCCceEEEEcc
Q 030179          158 RSLGLHTLCLLGG  170 (181)
Q Consensus       158 ~~~~~~tlvlld~  170 (181)
                      ......+.+++..
T Consensus       161 ~~~~~~~~~~~~~  173 (239)
T d1cbfa_         161 LAKHKCTIALFLS  173 (239)
T ss_dssp             HHTTCSEEEEESC
T ss_pred             Hhhcccccccccc
Confidence            5555666766643

>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Siroheme synthase CysG, domains 4 and 5
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.92  E-value=7.7e-26  Score=178.20  Aligned_cols=136  Identities=23%  Similarity=0.264  Sum_probs=100.1

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHH----HhCCccccCChHHHHHHHHHHHHH
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEK----LYGKPIALADREMVEEKADKILSE   76 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~   76 (181)
                      +||+||+|||||++||++|+++|++||+|+|+.+...       +.++.++.    .............++++.+.+.+.
T Consensus         2 kl~~VGiGPGdp~~lT~ra~~~l~~Advv~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (242)
T d1pjqa2           2 EVVLVGAGPGDAGLLTLKGLQQIQQADIVVYDRLVSD-------DIMNLVRRDADRVFVGKRAGYHCVPQEEINQILLRE   74 (242)
T ss_dssp             EEEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTSCH-------HHHTTSCTTSEEEECSCC---CCCTTHHHHHHHHHH
T ss_pred             EEEEEeeCCCChHHHHHHHHHHHHcCCEEEEEcccCH-------HHHhhhhhhccccccccccccchhhHHHHHHHHHHH
Confidence            5899999999999999999999999999999765321       10001100    000000000112345666777776


Q ss_pred             ccC-CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHH-HHHcCCCcccCCceeEEecccC
Q 030179           77 SQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA-VGICGLQLYRFGETVSIPFFTE  143 (181)
Q Consensus        77 ~~~-~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a-~a~~g~~l~~~~~~~~v~~~~~  143 (181)
                      +++ ++|+++++|||++|+++.++.+.+.+.+++++++||+||+++ +|++++++.+++....+.+...
T Consensus        75 ~~~g~~V~~l~~Gdp~~~~~~~~l~~~~~~~~~~v~vipGiss~~~aaa~~~~~~~~~~~~~~~~~~~~  143 (242)
T d1pjqa2          75 AQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTG  143 (242)
T ss_dssp             HHTTCEEEEEESBCTTTSSSHHHHHTTTTTTTCCEEEECCCCHHHHHHHHTTCCSCCTTTCSEEEEECC
T ss_pred             HHCCCeEEEEeCCCcceecchhhHHHHHhhcCceEeecCCcchHHHHHHHhhhccccCCceeeeeeccc
Confidence            655 799999999999999999999999889999999999999986 5899999998877666655443

>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Hypothetical protein TTHA0667
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=7.2e-22  Score=153.03  Aligned_cols=126  Identities=20%  Similarity=0.173  Sum_probs=87.8

Q ss_pred             CEEEEecCCCCccchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHHh-CCccccCChHHHHHHHHHHHHHccC
Q 030179            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (181)
Q Consensus         1 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~   79 (181)
                      +||+||+||||||+||+||+++|++||+|+++.+..       .+.++.+.... .............+..+...+..++
T Consensus         2 ~l~~VGiGPGdpd~lTlkA~~~l~~aDvI~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (225)
T d1va0a1           2 RVYLVGAGPGDPELLTLKAYRLLKEAPVVLYDRLVD-------ERVLALAPGEKVYVGKEEGESEKQEEIHRLLLRHARA   74 (225)
T ss_dssp             EEEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTSC-------HHHHTTCCSEEEECCCCC----CHHHHHHHHHHHHHT
T ss_pred             EEEEEecCCCChHHHHHHHHHHHHhCCEEEEEcCcC-------HHHHHhccccceeeccccccchhHHHHHHHHHHHhhc
Confidence            589999999999999999999999999999976532       11111111100 0111111111223344444444445


Q ss_pred             -CCEEEEecCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCC
Q 030179           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFG  133 (181)
Q Consensus        80 -~~V~~l~~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~  133 (181)
                       +.++++..|||++|+....+.......++.++++||+||++++ ++++.++....
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipgiss~~~a~~~~~~~~~~~~  130 (225)
T d1va0a1          75 HPFVVRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLASGLPLTHRGLAHG  130 (225)
T ss_dssp             SSEEEEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCCCGGGTTCCCSSBTTTBSE
T ss_pred             cceEEEecCCcccccchhHHHHhhhccccceEEECCcccHHHHHhhccccCccccc
Confidence             5778889999999999988888888889999999999999975 78888877654

>d1wyza1 c.90.1.1 (A:2-234) Putative methytransferase BT4190 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Putative methytransferase BT4190
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.82  E-value=1e-20  Score=149.65  Aligned_cols=163  Identities=15%  Similarity=0.141  Sum_probs=102.5

Q ss_pred             CEEEEecCCCCc---cchhHHHHHHHhhCCeEEEcCcccccccccccchhhhhHHH-hCCc-----cccCChHHHHHHHH
Q 030179            1 MLYIIGLGLGDE---RDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKP-----IALADREMVEEKAD   71 (181)
Q Consensus         1 ~l~iVG~GpG~~---~~lT~~A~~~L~~advv~~~~~~~~l~~g~~~~~l~~~~~~-~~~~-----~~~~~~~~~~~~~~   71 (181)
                      .||+|++++||.   +++|++|+++|++||+|+|++...      +++   .++.+ ...+     ........-++..+
T Consensus         3 ~Lylv~tpiGnl~~~~~it~ra~~~l~~~d~i~~Edtr~------~~~---lL~~~~i~~~~~~~~~~~~~~~~~~~~~~   73 (233)
T d1wyza1           3 ALYLLPVTLGDTPLEQVLPSYNTEIIRGIRHFIVEDVRS------ARR---FLKKVDREIDIDSLTFYPLNKHTSPEDIS   73 (233)
T ss_dssp             SEEEECCCSSSSCHHHHSCTHHHHHHTTCCEEEESCHHH------HHH---HHHHHCSSSCTTCCCCEECCSSCCHHHHH
T ss_pred             eEEEEcCCCCCCchhhhcCHHHHHHHHhCCEEEEEeCHH------HHH---HHHHcCCccccchhhhhhhhhhhhHHHhH
Confidence            489999999995   799999999999999999986531      122   22222 1111     11011111122334


Q ss_pred             HHHHHcc-CCCEEEEe-cCCccccccHHHHHHHHHhCCCcEEEECCccHHHHH-HHcCCCcccCCceeEEecccCCCCCC
Q 030179           72 KILSESQ-ESNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPG  148 (181)
Q Consensus        72 ~i~~~~~-~~~V~~l~-~GDP~~~~~~~~l~~~~~~~g~~v~iiPGiSs~~a~-a~~g~~l~~~~~~~~v~~~~~~~~~~  148 (181)
                      .+++.++ +++|++++ .|+|++++++.++++++.+.|++++++||+||+.++ +.+|+|.+++.-.-.+...+.+.+  
T Consensus        74 ~i~~~l~~g~~v~lvsDaG~P~IsDPG~~lV~~~~~~gi~v~iiPG~SA~~aA~s~sG~~~~~~~f~gfl~~~~~~~~--  151 (233)
T d1wyza1          74 GYLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPSSIILSVMASGFNGQSFAFHGYLPIEPGERA--  151 (233)
T ss_dssp             HHHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHTSCSSSEEEEEECCSSTTHHH--
T ss_pred             HHHHHHhcCCeEEEEeccccccccchhhhhhhhhhcccccccccccCcchheeeeeccccccccccceeeeeecCccc--
Confidence            4555454 47888886 999999999999999999999999999999998765 899999988653333333222211  


Q ss_pred             ChHHHHHHHhcCCCceEEEEcceeee
Q 030179          149 SFYEKIKRNRSLGLHTLCLLGGVTLC  174 (181)
Q Consensus       149 ~~~~~i~~~~~~~~~tlvlld~~~~~  174 (181)
                      .....+.........|+|+++...|+
T Consensus       152 ~~~~~l~~~~~~~~~t~v~~e~~~r~  177 (233)
T d1wyza1         152 KKLKTLEQRVYAESQTQLFIETPYRN  177 (233)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEECGGGH
T ss_pred             chhhhhhhhhhccCceeEEEecchhH
Confidence            11233444445556789998776664