Citrus Sinensis ID: 030235

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
Protein Sequence
MATVSLSSTLYSTYRTKLHTSKVMPSCSLTIPIRTFNFQIKLALKNKKQKWGFNGMRVLRSSEEETLITEQETEAVEETVAADEQQPVAVPVSPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTLNLSFDDEEEVLV
Secondary Structure (PSIPRED)
ccEEEcccccccccccccccccccccccccccccccccHHHHHHHHccccccccccEEEEcccccccccHHHHHHHHHHHcccccccEEEEccccccEEEEEEEccccccccHHHHHHHHHccccccccEEEEEEcEEEEEEEEEEEEcHHHHHHHHHHHHcccEEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEccccccccccccccccccccccccccccccccccHHcccccccccccccEEEEEEEcccccccccccccccccccccccccEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHccccccEEEEEEEcEEEEEcccEEHHcHHHHHHHHHHHHcccEEEEEEcccccHHHccc
Coil and Loop (DISEMBL)
MATVSLSSTLYSTYRTklhtskvmpscsltipirTFNFQIKLALKNKkqkwgfngmrvlrsseeetlITEQETEAVEETvaadeqqpvavpvspsdkltMYFQAdgamnetaIPAVTQAlqgtegisdLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSgfklqtlnlsfddeeevlv
Flexible Loop (DISEMBL)
matvslssTLYSTyrtklhtskvmpscsltIPIRTFNFQIKLALKnkkqkwgfngMRVLRSSEEETLITEQETEAVEetvaadeqqpvavpvspsDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSgfklqtlnlsfddeeevlv
Low Complexity Region (SEG)
MATVslsstlystyRTKLHTSKVMPSCSLTIPIRTFNFQIKLALKNKKQKWGFNGMRVLRSSeeetliteqeteaveetvaadeqqPVAVPVSPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTLNLSFDDEEEVLV
Disordered region (IsUnstruct)
*********LYSTYRTKLHTSKVMPSCSLTIPIRTFNFQIKLALKNKKQKWGFNGMRVL**************************************LTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTLNLS*********
Disordered Region (DISOPRED)
********TLYST******************PIRTFNFQIKL***************************************************PSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTLNLSFDDEEEVLV
Disordered Region (DISEMBL)
********TLYSTYRTKLHTSKVMPSCSLTIPIRTFNFQIKLALKNKKQKWGFNGMRVLRSSEEETLITEQETEAVEETVAADEQQPVAVPVSPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTLNLSFDDEEEVLV
Disordered Region (DISPRO)
********TLYSTY*************SLTIPIRTFNFQIKLALKNKKQKWGFNGMRVLRSSEE**********************PVAVPVSPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTLNLSFDDEE**LV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MATVSLSSTLYSTYRTKLHTSKVMPSCSLTIPIRTFNFQIKLALKNKKQKWGFNGMRVLRSSEEETLITEQETEAVEETVAADEQQPVAVPVSPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTLNLSFDDEEEVLV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
359488731	183	PREDICTED: uncharacterized protein LOC10	0.966	0.956	0.545	5e-40
255552698	219	metal ion binding protein, putative [Ric	0.955	0.789	0.539	7e-38
18417512	178	heavy metal transport/detoxification dom	0.917	0.932	0.518	2e-37
224060008	184	predicted protein [Populus trichocarpa]	0.977	0.961	0.572	3e-37
9755658	175	putative protein [Arabidopsis thaliana]	0.911	0.942	0.518	4e-37
449459422	181	PREDICTED: uncharacterized protein LOC10	0.972	0.972	0.494	1e-35
297807505	178	heavy-metal-associated domain-containing	0.961	0.977	0.508	8e-35
388491950	178	unknown [Lotus japonicus] gi|388504556|g	0.519	0.528	0.687	5e-31
388514407	195	unknown [Medicago truncatula]	0.524	0.487	0.659	7e-28
351726030	183	uncharacterized protein LOC100305469 [Gl	0.651	0.644	0.624	6e-27

>gi|359488731|ref|XP_002275276.2| PREDICTED: uncharacterized protein LOC100264617 [Vitis vinifera]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/187 (54%), Positives = 132/187 (70%), Gaps = 12/187 (6%)

Query: 1   MATVSLSSTLYSTYRTKLHTSKVMPSCS--LTIPIR---TFNFQIKLALKNKKQKWGFNG 55
           MAT++  S+L S  +T +H        S  +  P+      N   +L +KN+ +    +G
Sbjct: 1   MATIAAVSSLSSICKTSIHCHGASRHSSSFMKFPVHRNCAANCFGRLTVKNENRS---HG 57

Query: 56  MRVLRSSEEETLITEQETEAVEETVAADEQQPVAVPVSPSDKLTMYFQADGAMNETAIPA 115
            R +RS  EETL+ E+E E  EE  + D  QPV+VPVSPSD LTM+FQA+G MNETAIP 
Sbjct: 58  SRKIRSVAEETLVPEEEGEEGEEGSSVD--QPVSVPVSPSDILTMFFQAEGTMNETAIPT 115

Query: 116 VTQALQGTEGISDLKVQVIEGIATVE--KQTTVQATGVAANLVEIIQGSGFKLQTLNLSF 173
           VT+AL+ TEGI+ LKVQV+EGIA+V   KQTTVQATGVA++LVE IQGSGFKLQTLNLSF
Sbjct: 116 VTKALEETEGITTLKVQVVEGIASVALTKQTTVQATGVASSLVETIQGSGFKLQTLNLSF 175

Query: 174 DDEEEVL 180
           +DEE+++
Sbjct: 176 EDEEDII 182

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552698|ref|XP_002517392.1| metal ion binding protein, putative [Ricinus communis] gi|223543403|gb|EEF44934.1| metal ion binding protein, putative [Ricinus communis]

 Score =  162 bits (409), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/189 (53%), Positives = 132/189 (69%), Gaps = 16/189 (8%)

Query: 1   MATVS-LSSTLYSTYRTKLHTSKVMPSCSLT-IPIRTFNFQI---KLALKN--KKQKWGF 53
           MAT+S  SS+L+S  R     S+ + S SL+ +  ++  F      + LKN  K +   F
Sbjct: 1   MATLSTFSSSLHSIPRPN---SQRIHSHSLSFLHFQSHGFSSSFNNIILKNTTKGRTSFF 57

Query: 54  NGMRVLRSSEEETLITEQETEAVEETVAADEQQPVAVPVSPSDKLTMYFQADGAMNETAI 113
           +G+R L+S EE+T I+E+     +          V+VPVSPSD LTM+FQA+G MNETAI
Sbjct: 58  HGIRKLKSLEEDTQISEEAQVEEQPEQQQ----TVSVPVSPSDTLTMFFQAEGTMNETAI 113

Query: 114 PAVTQALQGTEGISDLKVQVIEGIATVE--KQTTVQATGVAANLVEIIQGSGFKLQTLNL 171
           P VT+AL+G+EGI+DLKVQV EGIA+VE  KQTT QATGVA++LVE+IQGSGFKLQTLNL
Sbjct: 114 PTVTKALEGSEGITDLKVQVQEGIASVELTKQTTAQATGVASSLVELIQGSGFKLQTLNL 173

Query: 172 SFDDEEEVL 180
           SF DEE+ L
Sbjct: 174 SFADEEDAL 182

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18417512|ref|NP_568306.1| heavy metal transport/detoxification domain-containing protein [Arabidopsis thaliana] gi|14517526|gb|AAK62653.1| AT5g14910/F2G14_30 [Arabidopsis thaliana] gi|15810113|gb|AAL06982.1| AT5g14910/F2G14_30 [Arabidopsis thaliana] gi|21554207|gb|AAM63286.1| unknown [Arabidopsis thaliana] gi|332004705|gb|AED92088.1| heavy metal transport/detoxification domain-containing protein [Arabidopsis thaliana]

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/193 (51%), Positives = 125/193 (64%), Gaps = 27/193 (13%)

Query: 1   MATVSLSSTLYSTYRTKLHTSKVMPSCSLTIPIRTFNFQIKLALKNKKQ-------KWGF 53
           MA+++ SST +S  RTK   S  + S  L    +  NF+ + A+ N +        K   
Sbjct: 1   MASIAASSTFHSFCRTK---SPNLSSTHLLPLSKNLNFRTR-AIGNSRNCSFAGFIKQNR 56

Query: 54  NGMRVLRSSEEETLITEQETEAVEETVAADEQQP---VAVPVSPSDKLTMYFQADGAMNE 110
            G+R L S  E             E VA  E+QP   V+VPVSPSD LTM+FQADG +NE
Sbjct: 57  LGLRKLSSIGEGG-----------EGVAVAEEQPQETVSVPVSPSDMLTMFFQADGTLNE 105

Query: 111 TAIPAVTQALQGTEGISDLKVQVIEGIATVE--KQTTVQATGVAANLVEIIQGSGFKLQT 168
            AIP VT+ALQ  +G+S+LKVQV EG+A VE  KQTTVQATGVA+NLVE IQG+GFKLQT
Sbjct: 106 AAIPNVTRALQDIDGVSNLKVQVSEGVAVVELLKQTTVQATGVASNLVETIQGAGFKLQT 165

Query: 169 LNLSFDDEEEVLV 181
           LNLSF+D++EVLV
Sbjct: 166 LNLSFEDDDEVLV 178

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060008|ref|XP_002300027.1| predicted protein [Populus trichocarpa] gi|222847285|gb|EEE84832.1| predicted protein [Populus trichocarpa]

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/185 (57%), Positives = 129/185 (69%), Gaps = 8/185 (4%)

Query: 2   ATVSLSSTLYSTYRTKLHTSKVMPSCSLTIPIRTFNFQI---KLALKNKKQKWGFNGMRV 58
           +TVS  S L+S   T   T    P  +  I  R   F I    LALK K   +  +G+R 
Sbjct: 3   STVSTFSALHSVC-TPNATRTPSPPFARRITTRFHGFPISFKHLALK-KANDFYSHGLRR 60

Query: 59  LRSSEEETLITEQETEAVEETVAADEQQPVAVPVSPSDKLTMYFQADGAMNETAIPAVTQ 118
           LRS EEET I E+E +  +    + EQQ V+VPVSPSD LTMYFQA+G MNETAIP VT 
Sbjct: 61  LRSLEEETQIPEEEQQQEDVPEQS-EQQTVSVPVSPSDTLTMYFQAEGTMNETAIPKVTN 119

Query: 119 ALQGTEGISDLKVQVIEGIATVE--KQTTVQATGVAANLVEIIQGSGFKLQTLNLSFDDE 176
           AL+GTEG++DLKV+V+EGIA+VE  KQTTVQATGVA++LVE++Q SGFKLQTLNLSF D 
Sbjct: 120 ALEGTEGVTDLKVRVLEGIASVELTKQTTVQATGVASSLVELVQSSGFKLQTLNLSFQDV 179

Query: 177 EEVLV 181
           E+ LV
Sbjct: 180 EDALV 184

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9755658|emb|CAC01810.1| putative protein [Arabidopsis thaliana]

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/191 (51%), Positives = 124/191 (64%), Gaps = 26/191 (13%)

Query: 1   MATVSLSSTLYSTYRTKLHTSKVMPSCSLTIPIRTFNFQIKLALKNKKQ-------KWGF 53
           MA+++ SST +S  RTK   S  + S  L    +  NF+ + A+ N +        K   
Sbjct: 1   MASIAASSTFHSFCRTK---SPNLSSTHLLPLSKNLNFRTR-AIGNSRNCSFAGFIKQNR 56

Query: 54  NGMRVLRSSEEETLITEQETEAVEETVAADEQQP---VAVPVSPSDKLTMYFQADGAMNE 110
            G+R L S  E             E VA  E+QP   V+VPVSPSD LTM+FQADG +NE
Sbjct: 57  LGLRKLSSIGEGG-----------EGVAVAEEQPQETVSVPVSPSDMLTMFFQADGTLNE 105

Query: 111 TAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTLN 170
            AIP VT+ALQ  +G+S+LKVQV EG+A VE QTTVQATGVA+NLVE IQG+GFKLQTLN
Sbjct: 106 AAIPNVTRALQDIDGVSNLKVQVSEGVAVVE-QTTVQATGVASNLVETIQGAGFKLQTLN 164

Query: 171 LSFDDEEEVLV 181
           LSF+D++EVLV
Sbjct: 165 LSFEDDDEVLV 175

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459422|ref|XP_004147445.1| PREDICTED: uncharacterized protein LOC101219347 [Cucumis sativus] gi|449517154|ref|XP_004165611.1| PREDICTED: uncharacterized LOC101219347 [Cucumis sativus]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/186 (49%), Positives = 123/186 (66%), Gaps = 10/186 (5%)

Query: 1   MATVSLSSTLYSTYRTKLHTSKVMPSCSLTIPIRTFNFQIKLALKNKKQKWGFNGMRVL- 59
           MA++S    L+  +      S  +PS S ++P  T NF +  A        G +  RVL 
Sbjct: 1   MASISTFPALHFPFSK----SSPIPSHSFSLPSPT-NFTLSAASFRHSPLQGRSLPRVLK 55

Query: 60  --RSSEEETLITEQETEAVEETVAADEQQPVAVPVSPSDKLTMYFQADGAMNETAIPAVT 117
             R+ EE+  + E   E+   + +  +   V VPVSPSD LTM+FQA+G +NE+AIP+VT
Sbjct: 56  QVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVT 115

Query: 118 QALQGTEGISDLKVQVIEGIATVE--KQTTVQATGVAANLVEIIQGSGFKLQTLNLSFDD 175
            AL+ TEGIS LKVQV+EGIA+V   KQTT+Q+TGVA++L+E IQG+GFKLQTLNLSF+D
Sbjct: 116 GALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED 175

Query: 176 EEEVLV 181
           EEEV V
Sbjct: 176 EEEVFV 181

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807505|ref|XP_002871636.1| heavy-metal-associated domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297317473|gb|EFH47895.1| heavy-metal-associated domain-containing protein [Arabidopsis lyrata subsp. lyrata]

 Score =  151 bits (382), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/185 (50%), Positives = 122/185 (65%), Gaps = 11/185 (5%)

Query: 1   MATVSLSSTLYSTYRTKLHTSKVMPSCSLTIPIRTFNFQIKLALKNKKQKWGFNGMRVLR 60
           MA+++ SST +    TK   S  + S  L    +  NF+ + A+ N +    F G   ++
Sbjct: 1   MASIAASSTFHLFCTTK---SPNLSSTHLLPLSKNLNFRTR-AIGNSR-ICSFAGF--MK 53

Query: 61  SSEEETLITEQETEAVEETVAADEQQ--PVAVPVSPSDKLTMYFQADGAMNETAIPAVTQ 118
            +    +      E  E    A+EQQ   V+VPVSPSD LTM+FQADG +NE AIP VT+
Sbjct: 54  QNRLGLMKLSSVGEGGEGVAVAEEQQQETVSVPVSPSDMLTMFFQADGTLNEAAIPNVTR 113

Query: 119 ALQGTEGISDLKVQVIEGIATVE--KQTTVQATGVAANLVEIIQGSGFKLQTLNLSFDDE 176
           ALQ  +G+S+LKVQV EG+A VE  KQTTVQATGVA++LVE IQG+GFKLQTLNLSF+DE
Sbjct: 114 ALQDIDGVSNLKVQVSEGVAVVELSKQTTVQATGVASSLVETIQGAGFKLQTLNLSFEDE 173

Query: 177 EEVLV 181
           +EVLV
Sbjct: 174 DEVLV 178

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491950|gb|AFK34041.1| unknown [Lotus japonicus] gi|388504556|gb|AFK40344.1| unknown [Lotus japonicus]

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/96 (68%), Positives = 84/96 (87%), Gaps = 2/96 (2%)

Query: 84  EQQPVAVPVSPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIAT--VE 141
           EQQPV VP+SPSD LTM FQA+G +NETA+PA+T+AL+ T+G+++L+V + EG+A+  +E
Sbjct: 79  EQQPVVVPISPSDTLTMLFQAEGILNETAVPALTKALEETDGVTNLRVHLFEGLASLELE 138

Query: 142 KQTTVQATGVAANLVEIIQGSGFKLQTLNLSFDDEE 177
           KQTTVQATGVA++LVE IQG GFKLQTLNLSFDD E
Sbjct: 139 KQTTVQATGVASSLVETIQGLGFKLQTLNLSFDDAE 174

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514407|gb|AFK45265.1| unknown [Medicago truncatula]

 Score =  129 bits (323), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 64/97 (65%), Positives = 78/97 (80%), Gaps = 2/97 (2%)

Query: 79  TVAADEQQPVAVPVSPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIA 138
           T    EQ  V VP+SPSD LTM FQA+G +NETA+P + +AL+ TEG+ +LKV V EG+A
Sbjct: 82  TSVTSEQPSVVVPISPSDTLTMLFQAEGTLNETAVPPLRKALEETEGVKNLKVNVFEGLA 141

Query: 139 T--VEKQTTVQATGVAANLVEIIQGSGFKLQTLNLSF 173
           T  +EKQTT+QATGVA++LVEIIQG GFKLQTLNLSF
Sbjct: 142 TLELEKQTTIQATGVASSLVEIIQGLGFKLQTLNLSF 178

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726030|ref|NP_001235833.1| uncharacterized protein LOC100305469 [Glycine max] gi|255625599|gb|ACU13144.1| unknown [Glycine max]

 Score =  125 bits (315), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 101/125 (80%), Gaps = 7/125 (5%)

Query: 57  RVLRSSEEETLITEQETEAVEET--VAADEQQPVAVPVSPSDKLTMYFQADGAMNETAIP 114
           RV+++ EEET   +QE  AV+E+   +  E  PV VPVSPSD LTM+FQA+G ++ETAIP
Sbjct: 58  RVVKAVEEET---QQELTAVDESEQPSTSEAPPVVVPVSPSDTLTMFFQAEGTVSETAIP 114

Query: 115 AVTQALQGTEGISDLKVQVIEGIATVE--KQTTVQATGVAANLVEIIQGSGFKLQTLNLS 172
           A+T+AL+ T+G++DLK Q+ EG+A +E  KQTTVQATGVA+ L+E IQGSGFKLQTLNLS
Sbjct: 115 ALTKALEETDGVTDLKFQLAEGLAILELKKQTTVQATGVASGLLETIQGSGFKLQTLNLS 174

Query: 173 FDDEE 177
           F+DEE
Sbjct: 175 FEDEE 179

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
TAIR|locus:2147795	178	AT5G14910 [Arabidopsis thalian	0.519	0.528	0.75	2.3e-32

TAIR|locus:2147795 AT5G14910 [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 72/96 (75%), Positives = 85/96 (88%)

Query:    88 VAVPVSPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVE--KQTT 145
             V+VPVSPSD LTM+FQADG +NE AIP VT+ALQ  +G+S+LKVQV EG+A VE  KQTT
Sbjct:    83 VSVPVSPSDMLTMFFQADGTLNEAAIPNVTRALQDIDGVSNLKVQVSEGVAVVELLKQTT 142

Query:   146 VQATGVAANLVEIIQGSGFKLQTLNLSFDDEEEVLV 181
             VQATGVA+NLVE IQG+GFKLQTLNLSF+D++EVLV
Sbjct:   143 VQATGVASNLVETIQGAGFKLQTLNLSFEDDDEVLV 178


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.354    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      181       147   0.00091  103 3  11 22  0.47    31
                                                     30  0.50    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  567 (60 KB)
  Total size of DFA:  114 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.45u 0.15s 12.60t   Elapsed:  00:00:00
  Total cpu time:  12.45u 0.15s 12.60t   Elapsed:  00:00:00
  Start:  Fri May 10 15:21:07 2013   End:  Fri May 10 15:21:07 2013

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0045036 "protein targeting to chloroplast" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G14910	heavy-metal-associated domain-containing protein; heavy-metal-associated domain-containing protein; FUNCTIONS IN- metal ion binding; INVOLVED IN- metal ion transport; LOCATED IN- thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Heavy metal transport/detoxification protein (InterPro-IPR006121); Has 18 Blast hits to 18 proteins in 7 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink). (178 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	EDA3	EDA3 (embryo sac development arrest 3); heat shock protein binding / unfolded protein binding; [...] (186 aa)				•			•		0.958
	AT1G71500	Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein; FUNCTIONS [...] (287 aa)				•			•		0.939
	AT3G47070	unknown protein; unknown protein; LOCATED IN- thylakoid, chloroplast thylakoid membrane, chloro [...] (100 aa)				•			•		0.937
	emb1473	emb1473 (embryo defective 1473); structural constituent of ribosome; embryo defective 1473 (emb [...] (241 aa)				•					0.925
	emb2184	emb2184 (embryo defective 2184); structural constituent of ribosome; embryo defective 2184 (emb [...] (144 aa)				•					0.923
	AT4G01310	ribosomal protein L5 family protein; ribosomal protein L5 family protein; FUNCTIONS IN- structu [...] (262 aa)				•					0.919
	AT1G52220	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (156 aa)				•			•		0.919
	AT4G17560	ribosomal protein L19 family protein; ribosomal protein L19 family protein; FUNCTIONS IN- struc [...] (225 aa)				•					0.917
	RRF	RRF (RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR); RIBOSOME RECYCLING FACTOR, CHLOROPLAST [...] (275 aa)				•			•		0.914
	AT5G47190	ribosomal protein L19 family protein; ribosomal protein L19 family protein; FUNCTIONS IN- struc [...] (229 aa)				•					0.911

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	181
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.01
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	98.93
KOG4656	247	consensus Copper chaperone for superoxide dismutas	97.32
PRK10671	834	copA copper exporting ATPase; Provisional	97.0
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	96.92
PLN02957	238	copper, zinc superoxide dismutase	96.11
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	95.95
TIGR00003	68	copper ion binding protein. This model describes a	95.61
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	93.34
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	92.24
PRK10671	834	copA copper exporting ATPase; Provisional	88.67
TIGR00268	252	conserved hypothetical protein TIGR00268. The N-te	87.83
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	80.77
PF02120	85	Flg_hook: Flagellar hook-length control protein Fl	80.23

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.01  E-value=9.2e-10  Score=76.99  Aligned_cols=65  Identities=22%  Similarity=0.510  Sum_probs=57.5

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccceee
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      .+.|+-+|-==++|+.+|+++|+.++||.+|+|+|+.|.+.|   ...++.      ..|+++|+++||++...
T Consensus         3 ~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~------~~i~~ai~~aGy~~~~~   70 (71)
T COG2608           3 KTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDI------EAIIEAIEDAGYKVEEI   70 (71)
T ss_pred             eEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCH------HHHHHHHHHcCCCeeec
Confidence            356888888889999999999999999999999999988887   446784      99999999999998653

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=98.93  E-value=1.1e-09  Score=72.08  Aligned_cols=58  Identities=26%  Similarity=0.465  Sum_probs=51.5

Q ss_pred             EeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcc
Q 030235          102 FQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFK  165 (181)
Q Consensus       102 f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFe  165 (181)
                      |+=+|-.-++|..+|+++|..++||.+++|++..+.++|   +..+++      +.|+++|+++||+
T Consensus         2 ~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~------~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    2 FKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSI------EKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCH------HHHHHHHHHTTSE
T ss_pred             EEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCH------HHHHHHHHHhCcC
Confidence            555677788999999999999999999999999999999   334664      9999999999996

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=97.32  E-value=0.00028  Score=61.74  Aligned_cols=63  Identities=21%  Similarity=0.363  Sum_probs=49.5

Q ss_pred             ceEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccc
Q 030235           97 KLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKL  166 (181)
Q Consensus        97 ~l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFev  166 (181)
                      .+..-|--.=+ -|+||..|++.|++++||.+|+|+|+++.++|..+..+      ++|..+|+.-|=++
T Consensus         6 ~~~~efaV~M~-cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~------s~i~~~le~tGr~A   68 (247)
T KOG4656|consen    6 TYEAEFAVQMT-CESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPP------SEIQNTLENTGRDA   68 (247)
T ss_pred             ceeEEEEEech-hHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCCh------HHHHHHHHhhChhe
Confidence            34444433333 68999999999999999999999999999999556664      78888888877654

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.00  E-value=0.0016  Score=62.62  Aligned_cols=63  Identities=19%  Similarity=0.316  Sum_probs=52.5

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      +.-|+-+|---++|+.+|+++|+.++||.+++|++.  .+++....+.      ..|+++|+++||++..+
T Consensus         4 ~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~------~~i~~~i~~~Gy~~~~~   66 (834)
T PRK10671          4 TIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASA------EALIETIKQAGYDASVS   66 (834)
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCH------HHHHHHHHhcCCccccc
Confidence            355777888889999999999999999999999995  4455334453      89999999999999864

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=96.92  E-value=0.0024  Score=44.64  Aligned_cols=54  Identities=17%  Similarity=0.294  Sum_probs=47.3

Q ss_pred             CCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCC-ccceee
Q 030235          110 ETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSG-FKLQTL  169 (181)
Q Consensus       110 e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aG-Fevqtl  169 (181)
                      ++|..+|.++|..++||.++++++.++..+|....++      +.|.+.|++.| .+...+
T Consensus        16 ~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p------~~vl~~l~k~~~k~~~~~   70 (73)
T KOG1603|consen   16 EGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDP------VKLLKKLKKTGGKRAELW   70 (73)
T ss_pred             ccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCH------HHHHHHHHhcCCCceEEe
Confidence            6899999999999999999999999999999555885      89999999887 665443

>PLN02957 copper, zinc superoxide dismutase

Probab=96.11  E-value=0.021  Score=48.06  Aligned_cols=63  Identities=17%  Similarity=0.289  Sum_probs=51.2

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      +.|.. |---+.|+.+|+++|..++||..+.+++..+.+.|....+      .+.|+++|++.||++.-+
T Consensus         8 ~~~~V-gMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~------~~~I~~aIe~~Gy~a~~~   70 (238)
T PLN02957          8 TEFMV-DMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSP------VKAMTAALEQTGRKARLI   70 (238)
T ss_pred             EEEEE-CccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCC------HHHHHHHHHHcCCcEEEe
Confidence            44555 5335799999999999999999999999999998843344      478999999999997544

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=95.95  E-value=0.0092  Score=60.32  Aligned_cols=54  Identities=19%  Similarity=0.365  Sum_probs=49.6

Q ss_pred             CCchHHHHHHhccCCCceeeEEEEecceEEE--eeeccccccchHHHHHHHHHhCCccceee
Q 030235          110 ETAIPAVTQALQGTEGISDLKVQVIEGIATV--EKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus       110 e~cV~sVTkALE~leGVsdVkVsLeeG~AtV--~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      -.|+.++.+++...+||.++.|+|..+.++|  ...+++      +.|+|+|+|+||+..-+
T Consensus         6 ~ac~~si~~~~~~~~g~~~i~vsl~~~~~~v~~~~~~~~------~~i~~~ied~gf~~~~~   61 (951)
T KOG0207|consen    6 SACSNSIEKAISRKPGVQKIEVSLAQKRANVSYDNIVSP------ESIKETIEDMGFEASLL   61 (951)
T ss_pred             HHHhhhHHHHHhcCCCceeEEEEeccccceEEEeeccCH------HHHHHHhhcccceeeec
Confidence            4699999999999999999999999999999  888885      99999999999998654

>TIGR00003 copper ion binding protein

Probab=95.61  E-value=0.072  Score=30.45  Aligned_cols=62  Identities=19%  Similarity=0.318  Sum_probs=48.7

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEe---eeccccccchHHHHHHHHHhCCccc
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVE---KQTTVQATGVAANLVEIIQGSGFKL  166 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~---kqttvqatgvassLvEAIe~aGFev  166 (181)
                      .+.|.-+|---..|...+++.+...+|+..+.+++..+...+.   ...+      ...+...+.+.||.+
T Consensus         3 ~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~   67 (68)
T TIGR00003         3 KFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQAT------EICIAEAILDAGYEV   67 (68)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCC------HHHHHHHHHHcCCCc
Confidence            3456667766679999999999999999999999999988772   2233      366777889999975

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=93.34  E-value=0.16  Score=51.69  Aligned_cols=63  Identities=17%  Similarity=0.374  Sum_probs=57.6

Q ss_pred             eEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccc
Q 030235           98 LTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKL  166 (181)
Q Consensus        98 l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFev  166 (181)
                      =..+|.-.|-+...|+.+|.+.|+.++||.+.+|++..+.+.|   +.-+.+      -.+.++|+..||+.
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~p------r~i~k~ie~~~~~~  211 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGP------RDIIKAIEETGFEA  211 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccCh------HHHHHHHHhhcccc
Confidence            3678999999999999999999999999999999999999999   666665      88999999999994

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=92.24  E-value=0.23  Score=48.81  Aligned_cols=62  Identities=18%  Similarity=0.368  Sum_probs=52.5

Q ss_pred             EEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235          101 YFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus       101 ~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      .|+=+|--...|+..|+ +|+.++||.++.|++....+.|   ....+.     .+.+..+|++.||....
T Consensus         5 ~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~-----~~~~~~~v~~~gy~~~~   69 (713)
T COG2217           5 SLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDL-----PADIVAAVEKAGYSARL   69 (713)
T ss_pred             EEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEeccccccc-----HHHHHHHHHhcCccccc
Confidence            35667878889999999 9999999999999999999999   223341     48999999999998765

>PRK10671 copA copper exporting ATPase; Provisional

Probab=88.67  E-value=1.3  Score=43.09  Aligned_cols=63  Identities=21%  Similarity=0.372  Sum_probs=54.4

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccce
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      ++.|.-+|.--..|...+.+.|+.++||.+++|++..+.+.+....+      .+.+.+.+++.||...
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s------~~~I~~~I~~~Gy~a~  162 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSAS------PQDLVQAVEKAGYGAE  162 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCC------HHHHHHHHHhcCCCcc
Confidence            67888999999999999999999999999999999999888843344      3678889999999864

>TIGR00268 conserved hypothetical protein TIGR00268

Probab=87.83  E-value=0.92  Score=37.95  Aligned_cols=58  Identities=16%  Similarity=0.393  Sum_probs=45.0

Q ss_pred             hHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccceeeccc
Q 030235          113 IPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQTLNLS  172 (181)
Q Consensus       113 V~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqtl~ls  172 (181)
                      |....+.|..+ |.++++|...++.|++   ++... ++..-...|...+...||+-.+|.|.
T Consensus       187 v~~~E~~l~~~-g~~~~rvr~~~~~a~ie~~~~~~~-~~~~~~~~i~~~~~~~gf~~v~ldl~  247 (252)
T TIGR00268       187 VDEAEEVLRNA-GVGQVRVRNYDNLAVIEVPEDELS-KLLNEAEEVRDKFKDIGFRKVLIDLE  247 (252)
T ss_pred             HHHHHHHHHHc-CCCeEEEEecCCeEEEEECHHHHH-HHHhhHHHHHHHHHHcCCCeEEEccC
Confidence            66777889997 9999999999999999   22222 11111477999999999999999874

The N-terminal region of the model shows similarity to Argininosuccinate synthase proteins using PSI-blast and using the recognize protein identification server.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=80.77  E-value=5.2  Score=38.95  Aligned_cols=67  Identities=16%  Similarity=0.288  Sum_probs=51.4

Q ss_pred             ceEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCcccee
Q 030235           97 KLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        97 ~l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      .=...|+-+|---..|...++++|+.++||.+++|++..+.+.+.-..+.     .+.+.+++++.||++..
T Consensus        52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~-----~~~I~~aI~~~Gy~a~~  118 (741)
T PRK11033         52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI-----RAQVESAVQKAGFSLRD  118 (741)
T ss_pred             CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccc-----hHHHHHHHHhccccccc
Confidence            33455666666668999999999999999999999999888777221111     26778899999998754

>PF02120 Flg_hook: Flagellar hook-length control protein FliK; InterPro: IPR021136 This entry represents the C-terminal domain of the flagellar hook-length control protein FliK

Probab=80.23  E-value=2.9  Score=28.83  Aligned_cols=52  Identities=21%  Similarity=0.292  Sum_probs=34.1

Q ss_pred             CceeeEEEEecceEEE-----eeeccccccchHHHHHHHHHhCCccceeecccccCc
Q 030235          125 GISDLKVQVIEGIATV-----EKQTTVQATGVAANLVEIIQGSGFKLQTLNLSFDDE  176 (181)
Q Consensus       125 GVsdVkVsLeeG~AtV-----~kqttvqatgvassLvEAIe~aGFevqtl~lsf~d~  176 (181)
                      |=-+|++.+.++..++     ...+--..-.-...|+++++..||++..++.+..+.
T Consensus        25 G~v~v~l~~~~~~l~v~~~~~~~~~~~~L~~~~~~L~~~L~~~G~~~~~~~v~~~~~   81 (85)
T PF02120_consen   25 GSVEVKLRLQGGNLSVQFTAENPETKELLRQNLPELKERLQAQGLEVVNLSVSQGSS   81 (85)
T ss_dssp             --EEEEEEEETTEEEEEEE--SSHHHHHHHHTHHHHHHHHHTTT-EEEEEEEESS--
T ss_pred             CcEEEEEEEeCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCeEEEEEEECCC
Confidence            3347888899998777     112222223446789999999999999988876554

This entry also includes YscP of the Yersinia type III secretion system, and equivalent proteins in other pathogenic bacterial type III secretion systems. During flagellar morphogenesis in Salmonella typhimurium and Escherichia coli, flagellar hook-length control protein (FliK) controls the length of the hook by directly measuring the hook length [, ]. It is considered unlikely that FliK functions as a molecular ruler for determining hook length, but that it is more likely to be employing a novel mechanism. The deduced amino acid sequences of FliK proteins from S. typhimurium and E. coli have molecular masses of 41,748 and 39,246 Da, respectively, and are fairly hydrophilic []. Sequence comparison reveals around 50% identity, with greatest conservation in the C-terminal region, with 71% identity in the last 154 amino acids - mutagenesis of this conserved region completely abolishes motility. The central and C-terminal regions are rich in proline and glutamine respectively; it is thought that they may constitute distinct domains [].; PDB: 2RRL_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	181
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	98.96
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	98.94
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	98.83
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	98.76
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	98.76
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	98.75
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	98.73
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	98.72
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	98.72
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	98.71
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	98.71
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	98.7
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	98.68
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	98.67
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	98.66
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	98.64
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	98.63
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	98.62
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	98.62
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	98.62
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	98.62
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	98.62
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	98.56
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	98.53
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	98.52
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	98.51
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	98.51
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.5
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	98.49
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.43
2kyz_A	67	Heavy metal binding protein; structural genomics,	98.39
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	98.33
2kkh_A	95	Putative heavy metal transporter; zinc transport,	98.31
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.22
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.11
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	98.06
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.03
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	97.87
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	97.72
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	97.66
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	97.3

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=98.96  E-value=8.6e-10  Score=69.87  Aligned_cols=64  Identities=19%  Similarity=0.333  Sum_probs=57.0

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE--eeeccccccchHHHHHHHHHhCCccceee
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV--EKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV--~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      +-|+-+|-.-.+|+.+|+++|+.++||.+++|++..+.++|  +..++      .+.|.++|+++||++.-|
T Consensus         4 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~------~~~i~~~i~~~Gy~~~~~   69 (69)
T 4a4j_A            4 INLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETT------PQILTDAVERAGYHARVL   69 (69)
T ss_dssp             EEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCC------HHHHHHHHHHTTCEEEEC
T ss_pred             EEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCC------HHHHHHHHHHcCCceEeC
Confidence            46788898899999999999999999999999999999999  35666      489999999999998643

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=98.94  E-value=1.1e-09  Score=70.45  Aligned_cols=65  Identities=20%  Similarity=0.313  Sum_probs=57.5

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccceeec
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQTLN  170 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqtl~  170 (181)
                      .-|+-+|-.-.+|+.+|+++|+.++||.+++|++..+.++|   +..++      .+.|+++|+++||++..++
T Consensus         4 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~~~   71 (74)
T 3dxs_X            4 IQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVK------EEDIKEEIEDAGFEAEILA   71 (74)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCC------HHHHHHHHHHHTCEEEEEE
T ss_pred             EEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHCCCceEEcc
Confidence            45788898899999999999999999999999999999999   33456      4899999999999997664

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=98.83  E-value=4.4e-09  Score=67.94  Aligned_cols=62  Identities=15%  Similarity=0.248  Sum_probs=55.0

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      ..|+- |-.-.+|+.+|+++|+.++|| +++|++..+.++|...++      .+.|.++|+++||++.-+
T Consensus         4 ~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~------~~~i~~~i~~~Gy~~~~~   65 (68)
T 3iwl_A            4 HEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHS------MDTLLATLKKTGKTVSYL   65 (68)
T ss_dssp             EEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSC------HHHHHHHHHTTCSCEEEE
T ss_pred             EEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCC------HHHHHHHHHHcCCceEec
Confidence            45777 878899999999999999999 999999999999955666      489999999999998654

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=98.76  E-value=1.7e-08  Score=61.64  Aligned_cols=61  Identities=20%  Similarity=0.345  Sum_probs=53.5

Q ss_pred             EEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCccce
Q 030235          101 YFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus       101 ~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      .|+-+|-.-.+|...|+++|+.++||.+++|++..+.++| .  ..++      .+.|.++|+++||++.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~   66 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQ------ATEICQAINELGYQAE   66 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHTTSSCEE
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCCcc
Confidence            4677888899999999999999999999999999999999 2  2345      4789999999999875

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=98.76  E-value=6e-09  Score=64.96  Aligned_cols=63  Identities=27%  Similarity=0.456  Sum_probs=54.9

Q ss_pred             EEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235          101 YFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus       101 ~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      .|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++|...++      .+.|.++|+++||++..+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~------~~~i~~~i~~~Gy~~~~~   65 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTAD------PKALVQAVEEEGYKAEVL   65 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCC------HHHHHHHHHTTTCEEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCC------HHHHHHHHHHcCCCcEec
Confidence            467788888999999999999999999999999999999943445      488999999999998654

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=98.75  E-value=2.3e-08  Score=60.81  Aligned_cols=63  Identities=25%  Similarity=0.370  Sum_probs=54.6

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      +-|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++|   +..++.      +.|.++|+++||++..
T Consensus         5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~------~~i~~~i~~~G~~~~~   70 (71)
T 2ldi_A            5 QQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSE------ITIQERIAALGYTLAE   70 (71)
T ss_dssp             EEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCT------HHHHHHHHTTTCEEEC
T ss_pred             EEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCH------HHHHHHHHHcCCCccC
Confidence            34778898899999999999999999999999999999998   234453      7899999999998754

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=98.73  E-value=2.7e-08  Score=61.55  Aligned_cols=62  Identities=19%  Similarity=0.263  Sum_probs=54.4

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCccce
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      +.|+-+|-.-.+|..+|+++|..++||.+++|++..+.++| -  ..++      .+.|.++|+++||++.
T Consensus         5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~   69 (72)
T 1osd_A            5 VTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTS------VQKLTKATADAGYPSS   69 (72)
T ss_dssp             EEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCC------HHHHHHHHHHTTCCCE
T ss_pred             EEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHhcCCCeE
Confidence            46888998899999999999999999999999999999999 2  2345      3789999999999864

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=98.72  E-value=9.5e-09  Score=62.09  Aligned_cols=62  Identities=18%  Similarity=0.287  Sum_probs=54.2

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccce
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      +.|+-+|---.+|+.+|+++|..++||.+++|++..+.++|....+      .+.|.++|+++||+++
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~------~~~i~~~i~~~G~~~~   64 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALG------EEQLRTAIASAGYEVE   64 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSC------HHHHHHHHHHTTCCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCC------HHHHHHHHHHcCCCCC
Confidence            3477788888899999999999999999999999999999954455      4889999999999863

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=98.72  E-value=1.8e-08  Score=62.42  Aligned_cols=63  Identities=24%  Similarity=0.469  Sum_probs=54.7

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCccce
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      .+.|+-+|---.+|+..|+++|..++||.+++|++..+.++| -  ..++      .+.|.++|+++||+++
T Consensus         6 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~   71 (71)
T 2l3m_A            6 QLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVT------LKDIVAVIEDQGYDVQ   71 (71)
T ss_dssp             EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSC------HHHHHHHHHHTTCEEC
T ss_pred             EEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCCCC
Confidence            456888898889999999999999999999999999999999 2  3445      3789999999999863

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=98.71  E-value=2.8e-08  Score=64.69  Aligned_cols=64  Identities=16%  Similarity=0.319  Sum_probs=56.4

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceeec
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTLN  170 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl~  170 (181)
                      ..-|+-+|-.-.+|+.+|+++|+. +||.+++|++..+.++|.-. +      .+.|+++|+++||++..+.
T Consensus         6 ~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~------~~~i~~~i~~~Gy~~~~~~   69 (73)
T 3fry_A            6 KIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-D------VDKYIKAVEAAGYQAKLRS   69 (73)
T ss_dssp             EEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-G------HHHHHHHHHHTTCEEEECC
T ss_pred             EEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-C------HHHHHHHHHHcCCceEecC
Confidence            346888999999999999999999 99999999999999999333 5      4899999999999987654

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=98.71  E-value=2.1e-08  Score=60.93  Aligned_cols=61  Identities=20%  Similarity=0.246  Sum_probs=53.0

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEe--eeccccccchHHHHHHHHHhCCccc
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVE--KQTTVQATGVAANLVEIIQGSGFKL  166 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~--kqttvqatgvassLvEAIe~aGFev  166 (181)
                      +.|+-+|-.-.+|+.+|+++|+.++||.+++|++..+.+++.  ...+      .+.|.++|+++||++
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~------~~~i~~~i~~~G~~~   65 (66)
T 1yg0_A            3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPAT------QDLIKEALLDAGQEV   65 (66)
T ss_dssp             EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCC------HHHHHHHHHHHTCCC
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCC------HHHHHHHHHHcCCCc
Confidence            457788888999999999999999999999999999999992  2224      488999999999976

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=98.70  E-value=2.2e-08  Score=61.57  Aligned_cols=64  Identities=19%  Similarity=0.336  Sum_probs=53.9

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE--eeeccccccchHHHHHHHHHhCCccceee
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV--EKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV--~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      +.|+-+|---.+|...|+++|..++||.+++|++..+.++|  ...++      .+.|.++|+++||++..+
T Consensus         5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~------~~~i~~~i~~~G~~~~~~   70 (71)
T 2xmw_A            5 INLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETT------PQILTDAVERAGYHARVL   70 (71)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---C------HHHHHHHHHHHTCEEEEE
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCC------HHHHHHHHHHcCCCceeC
Confidence            45778888889999999999999999999999999999999  22345      478999999999987643

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=98.68  E-value=3.8e-08  Score=63.47  Aligned_cols=63  Identities=16%  Similarity=0.186  Sum_probs=53.6

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCC-CceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTE-GISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~le-GVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      +.|+-+ ---.+|+.+|+++|..++ ||.+++|++..+.++|...++      .+.|+++|+++||++..+
T Consensus         7 ~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~------~~~i~~~i~~~Gy~~~~~   70 (73)
T 1cc8_A            7 YQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLP------YDFILEKIKKTGKEVRSG   70 (73)
T ss_dssp             EEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSC------HHHHHHHHHTTSSCEEEE
T ss_pred             EEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCC------HHHHHHHHHHhCCCceee
Confidence            446666 556899999999999999 999999999999999954556      489999999999997543

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=98.67  E-value=5e-08  Score=62.20  Aligned_cols=65  Identities=23%  Similarity=0.337  Sum_probs=56.0

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccceee
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      .+.|+-+|-.-.+|..+|+++|..++||.+++|++..+.++|   +..++      .+.|.++|+++||++..+
T Consensus         9 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~~   76 (79)
T 1kvi_A            9 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQT------PKTLQEAIDDMGFDAVIH   76 (79)
T ss_dssp             EEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCC------HHHHHHHHHHHCCCEEEC
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCC------HHHHHHHHHHCCCceEec
Confidence            456888998899999999999999999999999999999999   22344      478999999999987544

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=98.66  E-value=4.2e-08  Score=61.78  Aligned_cols=64  Identities=23%  Similarity=0.352  Sum_probs=55.4

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      .+.|+-+|-.-.+|..+|+++|..++||.+++|++..+.++|   +..++      .+.|.++|+++||++.-
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~   69 (75)
T 3cjk_B            3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQT------PKTLQEAIDDMGFDAVI   69 (75)
T ss_dssp             EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHHTTCCEEE
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCceEe
Confidence            456888898889999999999999999999999999999999   22345      37899999999998753

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=98.64  E-value=4e-08  Score=58.95  Aligned_cols=62  Identities=18%  Similarity=0.403  Sum_probs=53.4

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccce
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      +-|+-+|---.+|...|+++|..++||.+++|++..+.++|   +..++      .+.|.++|+++||++.
T Consensus         4 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~   68 (69)
T 2qif_A            4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVS------VKDIADAIEDQGYDVA   68 (69)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHHTTCEEC
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCCcc
Confidence            34778888889999999999999999999999999999998   23445      3789999999999763

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=98.63  E-value=4.3e-08  Score=60.64  Aligned_cols=61  Identities=21%  Similarity=0.340  Sum_probs=52.8

Q ss_pred             EEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE--eeeccccccchHHHHHHHHHhCCccce
Q 030235          101 YFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV--EKQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus       101 ~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV--~kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      .|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++|  ....+      ...|.++|+++||++.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~------~~~i~~~i~~~Gy~~~   65 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTS------PDALTAAVAGLGYKAT   65 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSC------HHHHHHHHHTTTSEEE
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCC------HHHHHHHHHHCCCceE
Confidence            3677888889999999999999999999999999999999  22234      4889999999999864

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=98.62  E-value=9.1e-08  Score=60.38  Aligned_cols=64  Identities=16%  Similarity=0.268  Sum_probs=54.9

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-eeeccccccchHHHHHHHHHhCCcccee
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-EKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      .+.|+-+|---.+|+.+|+++|..++||.+++|++..+.++| ..+..      .+.|.++|+++||++..
T Consensus         4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~------~~~i~~~i~~~Gy~~~~   68 (73)
T 1mwy_A            4 RYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI------RAQVESALQKAGYSLRD   68 (73)
T ss_dssp             EEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCC------HHHHHHHHHHHTCEEEE
T ss_pred             EEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCC------HHHHHHHHHHcCCcccc
Confidence            456888898899999999999999999999999999999999 22211      47899999999998754

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=98.62  E-value=3.9e-08  Score=61.26  Aligned_cols=65  Identities=14%  Similarity=0.240  Sum_probs=55.2

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-ee--eccccccchHHHHHHHHHhCCccceeec
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-EK--QTTVQATGVAANLVEIIQGSGFKLQTLN  170 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~k--qttvqatgvassLvEAIe~aGFevqtl~  170 (181)
                      +.|+-+|-.-.+|..+|+++|..++||.+++|++..+.++| ..  .++      .+.|.++|+++||++..+.
T Consensus         6 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~~~~   73 (75)
T 1yjr_A            6 LELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIG------PRDIIHTIESLGFEPSLVK   73 (75)
T ss_dssp             EEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTH------HHHHHHHHHHHHCEEEESS
T ss_pred             EEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCCceeec
Confidence            45778898899999999999999999999999999999999 22  234      3789999999999876543

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=98.62  E-value=2.7e-08  Score=61.53  Aligned_cols=63  Identities=17%  Similarity=0.322  Sum_probs=54.2

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-ee--eccccccchHHHHHHHHHhCCcccee
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-EK--QTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~k--qttvqatgvassLvEAIe~aGFevqt  168 (181)
                      +.|+-+|---.+|+.+|+++|..++||.+++|++..+.++| ..  .++      .+.|.++|+++||++.-
T Consensus         5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~~   70 (72)
T 1aw0_A            5 TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTS------PETLRGAIEDMGFDATL   70 (72)
T ss_dssp             EEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCC------HHHHHHHHHHHTCEEEE
T ss_pred             EEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCC------HHHHHHHHHHCCCCcEe
Confidence            45778888888999999999999999999999999999999 22  345      47899999999998643

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=98.62  E-value=1e-07  Score=59.06  Aligned_cols=64  Identities=19%  Similarity=0.326  Sum_probs=55.4

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      .+.|+-+|---.+|...|+++|..++||.+++|++..+.++|   +..++      .+.|.++|+++||++..
T Consensus         7 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~~   73 (76)
T 1opz_A            7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETG------TAAIQEKIEKLGYHVVI   73 (76)
T ss_dssp             EEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCC------HHHHHHHHHHHTCEEEC
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHCCCceec
Confidence            456888998899999999999999999999999999999998   23445      37899999999998754

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=98.62  E-value=8.8e-08  Score=63.00  Aligned_cols=64  Identities=14%  Similarity=0.286  Sum_probs=55.7

Q ss_pred             eEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccce
Q 030235           98 LTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus        98 l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      -.+.|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++|   +..++      ...|.++|+++||++.
T Consensus         9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~   75 (84)
T 1q8l_A            9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLIS------VEEMKKQIEAMGFPAF   75 (84)
T ss_dssp             EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCC------HHHHHHHHHHTTCCEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCceE
Confidence            3566888998899999999999999999999999999999999   22345      3789999999999864

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=98.56  E-value=4.5e-08  Score=66.95  Aligned_cols=62  Identities=16%  Similarity=0.221  Sum_probs=54.8

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccc
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKL  166 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFev  166 (181)
                      .+.|+-+|---.+|+.+|+++|+.++||.+++|++..+.++|...++      .+.|+++|+++||++
T Consensus        23 ~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~------~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           23 GLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSD------AAHIAEIITAAGYTP   84 (85)
T ss_dssp             EEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCC------HHHHHHHHHHTTCCC
T ss_pred             EEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCC------HHHHHHHHHHcCCCC
Confidence            34578888888999999999999999999999999999999954455      488999999999985

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=98.52  E-value=6.7e-08  Score=61.55  Aligned_cols=64  Identities=23%  Similarity=0.386  Sum_probs=55.1

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCcccee
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      .+.|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++| .  ..++      .+.|.++|+++||++..
T Consensus         4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~   70 (77)
T 1y3j_A            4 KCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQ------PPMIAEFIRELGFGATV   70 (77)
T ss_dssp             EEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSC------HHHHHHHHHHHTSCEEE
T ss_pred             EEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCceEE
Confidence            356788898889999999999999999999999999999999 2  2344      37899999999998754

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=98.51  E-value=7.4e-08  Score=59.54  Aligned_cols=65  Identities=18%  Similarity=0.410  Sum_probs=55.3

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE--eeeccccccchHHHHHHHHHhCCccceee
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV--EKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV--~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      .+.|+-+|-.-.+|...|+++|..++||.+++|++..+.++|  ...++      .+.|.++|+++||++..+
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~------~~~i~~~i~~~G~~~~~~   69 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVT------ADSIKEIIEDCGFDCEIL   69 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSC------HHHHHHHHHHHTCCEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCC------HHHHHHHHHHCCCceEEc
Confidence            345788898889999999999999999999999999999999  32334      478999999999987543

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.51  E-value=2.2e-07  Score=65.19  Aligned_cols=72  Identities=18%  Similarity=0.335  Sum_probs=58.8

Q ss_pred             eeecCCcceEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCcccee
Q 030235           90 VPVSPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        90 ~p~~~sd~l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      .|+..-....+.|+-+ ---.+|+.+|+++|..++||.+++|++..+.++|...++      ...|+++|+++||++.-
T Consensus        11 ~~~~~~~~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~------~~~i~~~i~~~Gy~~~~   82 (98)
T 2crl_A           11 DSGNQGTLCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLP------SQEVQALLEGTGRQAVL   82 (98)
T ss_dssp             CCCCCCCCEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSC------HHHHHHHHHTTTSCEEE
T ss_pred             CchhcccceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCC------HHHHHHHHHHhCCceEE
Confidence            3444333455668878 667899999999999999999999999999999954556      48899999999998754

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.50  E-value=1.8e-07  Score=66.48  Aligned_cols=66  Identities=21%  Similarity=0.349  Sum_probs=58.0

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccceeec
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQTLN  170 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqtl~  170 (181)
                      .+.|+-+|---.+|+.+|+++|..++||.+++|++..+.++|   +..++      .+.|.++|+++||++....
T Consensus        75 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~~~  143 (151)
T 1p6t_A           75 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEAS------VSDLKEAVDKLGYKLKLKG  143 (151)
T ss_dssp             EEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCC------HHHHHHHHHHHTCCEEESC
T ss_pred             ccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCC------HHHHHHHHHHcCCCeEEcC
Confidence            457889999999999999999999999999999999999999   34456      4889999999999976543

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=98.49  E-value=1.6e-07  Score=63.68  Aligned_cols=65  Identities=17%  Similarity=0.244  Sum_probs=55.2

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhC---Cccceeec
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGS---GFKLQTLN  170 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~a---GFevqtl~  170 (181)
                      +.|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++|   +..++.      +.|.++|+++   ||++..++
T Consensus         5 ~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~------~~i~~~i~~~g~Ggy~~~~~~   75 (90)
T 2g9o_A            5 ATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTP------ESLRKAIEAVSPGLYRVSITS   75 (90)
T ss_dssp             EEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCT------HHHHHHHHTTSTTTCEEECCC
T ss_pred             EEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCH------HHHHHHHHhccCCCeEEEEeC
Confidence            45778888888999999999999999999999999999999   334553      7899999999   59876443

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.43  E-value=1.8e-07  Score=65.83  Aligned_cols=63  Identities=19%  Similarity=0.316  Sum_probs=55.7

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccce
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      .+.|+-+|---.+|+.+|+++|+.++||.+++|++..+.++|   +..++      .+.|.++|+++||++.
T Consensus        81 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~  146 (149)
T 2ew9_A           81 NIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIG------PRDIIKIIEEIGFHAS  146 (149)
T ss_dssp             EEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSC------HHHHHHHHHHHTCEEE
T ss_pred             eeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCC------HHHHHHHHHhCCCceE
Confidence            456888998899999999999999999999999999999999   33355      3889999999999864

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=98.39  E-value=3.1e-07  Score=57.41  Aligned_cols=62  Identities=13%  Similarity=0.235  Sum_probs=52.3

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      +.|+-+|---.+|+.+|+++|+.+ ||.+++|++..+.++|.-..+       ..|+++|+++||++..+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-------~~i~~~i~~~Gy~~~~~   64 (67)
T 2kyz_A            3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-------DSVLKKLEEIDYPVESY   64 (67)
T ss_dssp             EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-------HHHHHHHHTTTCCCCBC
T ss_pred             EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-------HHHHHHHHHcCCceeeE
Confidence            346778888899999999999999 999999999999999932211       68999999999987643

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=98.33  E-value=3.1e-07  Score=57.96  Aligned_cols=64  Identities=22%  Similarity=0.358  Sum_probs=54.6

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccceee
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      +.|+-+|---.+|..+|+++|..++||.+++|++..+.++|   +..++      .+.|.++|+++||++...
T Consensus         5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~~~   71 (80)
T 1jww_A            5 AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEAS------VSDLKEAVDKLGYKLKLK   71 (80)
T ss_dssp             EEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCC------HHHHHHHHHHHTSEEEEC
T ss_pred             EEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCeEEec
Confidence            45778888888999999999999999999999999999998   23445      378999999999987543

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=98.31  E-value=1.1e-06  Score=59.20  Aligned_cols=64  Identities=14%  Similarity=0.310  Sum_probs=55.0

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-ee--eccccccchHHHHHHHHHhCCcccee
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-EK--QTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~k--qttvqatgvassLvEAIe~aGFevqt  168 (181)
                      .+.|+-+|-.-.+|+..|+++|..++||.++.|++..+.++| ..  .++      ...|.++|+++||++..
T Consensus        17 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~   83 (95)
T 2kkh_A           17 KSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLIS------PFQIAKALNEARLEANV   83 (95)
T ss_dssp             EEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHHHTCCEEE
T ss_pred             EEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCC------HHHHHHHHHHcCCceEE
Confidence            346888998899999999999999999999999999999999 22  234      37899999999998643

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.22  E-value=1.6e-06  Score=65.85  Aligned_cols=65  Identities=22%  Similarity=0.355  Sum_probs=56.7

Q ss_pred             eEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235           98 LTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        98 l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      -.+.|+-+|---.+|+.+|+++|..++||.+++|++..+.++|   +..++      .+.|.++|+++||++..
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~  189 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVIS------PEELRAAIEDMGFEASV  189 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHHHTSCEEE
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCC------HHHHHHHHHHcCCceEE
Confidence            3567899999999999999999999999999999999999999   23445      37899999999998754

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.11  E-value=4.1e-06  Score=58.87  Aligned_cols=63  Identities=19%  Similarity=0.384  Sum_probs=54.4

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCccce
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      .+.|+-+|---.+|+.+|+++|+.++||.+++|++..+.++| .  ..++      .+.|+++|+++||++.
T Consensus         5 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~   70 (149)
T 2ew9_A            5 KCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQ------PLEIAQFIQDLGFEAA   70 (149)
T ss_dssp             EEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCC------HHHHHHHHHHHTCEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCC------HHHHHHHHhcCCCceE
Confidence            356888998889999999999999999999999999999998 2  2344      3789999999999875

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.06  E-value=8.8e-06  Score=66.19  Aligned_cols=64  Identities=14%  Similarity=0.298  Sum_probs=54.7

Q ss_pred             eEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCcccee
Q 030235           98 LTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        98 l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      ..+-|+-+ -.-.+|+.+|+++|+.++||.+++|++..+.++|...++      .+.|+++|+++||++.-
T Consensus         6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~------~~~I~~aI~~~Gy~a~~   69 (222)
T 1qup_A            6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVA------PSTIINTLRNCGKDAII   69 (222)
T ss_dssp             EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSC------HHHHHHHHHHTTCCCEE
T ss_pred             eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCC------HHHHHHHHHHcCCcccc
Confidence            34557777 556899999999999999999999999999999954555      48899999999999754

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.03  E-value=1e-05  Score=67.17  Aligned_cols=66  Identities=14%  Similarity=0.278  Sum_probs=56.3

Q ss_pred             ceEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235           97 KLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus        97 ~l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      ...+.|+-+ -.-.+|+.+|+++|+.++||.+++|++..+.++|...++      .+.|+++|+++||++.-.
T Consensus         6 ~~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~------~~~I~~aIe~~Gy~a~~~   71 (249)
T 1jk9_B            6 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVA------PSTIINTLRNCGKDAIIR   71 (249)
T ss_dssp             CEEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSC------HHHHHHHHHTTTCCCEEE
T ss_pred             ceeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCC------HHHHHHHHHHhCCCcccc
Confidence            455667777 556899999999999999999999999999999954556      489999999999997543

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=97.87  E-value=1.2e-05  Score=50.48  Aligned_cols=59  Identities=14%  Similarity=0.232  Sum_probs=49.1

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCcccee
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      ..|+-+|---.+|..+|+++|..++||.+++|++..+.++|.-..+          .++|+++||...-
T Consensus         5 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----------~~~i~~~Gy~~~~   63 (71)
T 2aj0_A            5 TVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----------IQQVEQAGAFEHL   63 (71)
T ss_dssp             EEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----------HHHHHHHHTTTTC
T ss_pred             EEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----------HHHHHHhCCCccc
Confidence            3577888888899999999999999999999999999999932222          4688999998643

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=97.72  E-value=5.8e-05  Score=53.38  Aligned_cols=61  Identities=20%  Similarity=0.342  Sum_probs=51.7

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCccc
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKL  166 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFev  166 (181)
                      ..|+-+|---.+|+.+|+++|+.++||.++.|++..+.+.+ .  ...+      ...|.++|+++||++
T Consensus         8 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~   71 (151)
T 1p6t_A            8 IAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETG------TAAIQEKIEKLGYHV   71 (151)
T ss_dssp             EEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSC------HHHHHHHHHHHTCEE
T ss_pred             EEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCC------HHHHHHHHHHcCCcc
Confidence            34777887778999999999999999999999999999988 2  2334      377899999999965

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=97.66  E-value=5.6e-05  Score=57.33  Aligned_cols=62  Identities=19%  Similarity=0.317  Sum_probs=53.0

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhC---Cccc
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGS---GFKL  166 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~a---GFev  166 (181)
                      .+-|+-+|---.+|+.+|+++|..++||.+++|++..+.++| .  ..++      ...|.++|+++   ||++
T Consensus        21 ~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~~~gg~~v   88 (202)
T 2rop_A           21 TLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTS------PVALQRAIEALPPGNFKV   88 (202)
T ss_dssp             EEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHTTSSSSCSEE
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHhccCCeEE
Confidence            345888998889999999999999999999999999999999 2  2344      37899999998   4776

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.30  E-value=0.00014  Score=67.12  Aligned_cols=63  Identities=16%  Similarity=0.335  Sum_probs=56.1

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      .-|+-+|---.+|+.+|+++|+.++||.+++|++..+.++|   +..++      .+.|+++|+++||++..
T Consensus         4 ~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~------~~~i~~ai~~~Gy~~~~   69 (723)
T 3j09_A            4 RTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRID------FETIKRVIEDLGYGVVD   69 (723)
T ss_dssp             EEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHHHCCEESS
T ss_pred             EEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCC------HHHHHHHHHhcCCcccc
Confidence            45788899999999999999999999999999999999999   34456      48999999999999854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	181
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.08
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.07
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.06
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.03
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.0
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	98.98
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	98.98
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	98.95
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	98.91
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	98.87
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	98.84
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	98.83
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	98.82
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	98.7

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.08  E-value=7.9e-11  Score=78.62  Aligned_cols=65  Identities=18%  Similarity=0.339  Sum_probs=59.0

Q ss_pred             cceEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccc
Q 030235           96 DKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKL  166 (181)
Q Consensus        96 d~l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFev  166 (181)
                      +.-..-|+-+|-.=.+|+.+|+++|..++||.+|+|++..+.++|   +..+++      +.|+++|+++||++
T Consensus         4 ~~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~------~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGT------AAIQEKIEKLGYHV   71 (72)
T ss_dssp             CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCH------HHHHHHHHHHTCEE
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCH------HHHHHHHHHhCCcc
Confidence            344667999999999999999999999999999999999999999   566774      99999999999997

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.07  E-value=9.4e-11  Score=77.88  Aligned_cols=61  Identities=20%  Similarity=0.388  Sum_probs=55.5

Q ss_pred             EeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235          102 FQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus       102 f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      |+=+|-.=.+|+.+|+++|+.++||.+++|++..+.++|   +..+++      +.|+++|+++||++.-
T Consensus         4 l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~------~~i~~~i~~~Gy~a~v   67 (68)
T d1cpza_           4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQA------TEICQAINELGYQAEV   67 (68)
T ss_dssp             EEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH------HHHHHHHHTTSSCEEE
T ss_pred             EEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCH------HHHHHHHHhhCCCcEE
Confidence            677888899999999999999999999999999999999   456774      8999999999999763

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.06  E-value=9.2e-11  Score=77.30  Aligned_cols=63  Identities=19%  Similarity=0.268  Sum_probs=57.3

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccce
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      ++-|+-+|--=++|+.+|+++|++++||.+|+|++..+.++|...++      .+.|+++|+++||+++
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~------~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALG------EEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSC------HHHHHHHHHHHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCC------HHHHHHHHHHcCCCCC
Confidence            45688888888999999999999999999999999999999966677      4899999999999975

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.03  E-value=2.1e-10  Score=76.84  Aligned_cols=65  Identities=18%  Similarity=0.410  Sum_probs=57.5

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE--eeeccccccchHHHHHHHHHhCCccceee
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV--EKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV--~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      .+-|+-+|-.=.+|+.+|+++|+.++||.+++|++..+.++|  ...++      .+.|+++|+++||++.-+
T Consensus         3 ~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~------~~~i~~~i~~~Gy~a~~~   69 (72)
T d2ggpb1           3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVT------ADSIKEIIEDCGFDCEIL   69 (72)
T ss_dssp             EEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCC------HHHHHHHHHHTTCCCEEE
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCC------HHHHHHHHHHhCCCeEEc
Confidence            356788998999999999999999999999999999999999  34566      389999999999998754

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=3.4e-10  Score=78.33  Aligned_cols=70  Identities=14%  Similarity=0.293  Sum_probs=63.0

Q ss_pred             cCCcceEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235           93 SPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        93 ~~sd~l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      ..++..++-|+-+|-.=.+|+.+|+++|+.++||.+++|++..+.++|   +..+++      +.|+++|+++||++.-
T Consensus         4 ~~~~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~------~~i~~~I~~~Gy~a~~   76 (84)
T d1q8la_           4 AQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISV------EEMKKQIEAMGFPAFV   76 (84)
T ss_dssp             SSSSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCH------HHHHHHHHHTTCCEEC
T ss_pred             CCCCCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCH------HHHHHHHHHhCCccEE
Confidence            456778888999999999999999999999999999999999999999   456774      8999999999998653

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.98  E-value=5.9e-10  Score=75.31  Aligned_cols=66  Identities=15%  Similarity=0.306  Sum_probs=57.1

Q ss_pred             CcceEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccce
Q 030235           95 SDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus        95 sd~l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      .|+..+.|+= +--=++|+.+|+++|+.++||.+|+|+|..+.++|...+++      +.|+++|+++||++.
T Consensus         3 ~~~~~~~f~V-~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~------~~i~~~I~~~G~~A~   68 (72)
T d1qupa2           3 NDTYEATYAI-PMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAP------STIINTLRNCGKDAI   68 (72)
T ss_dssp             GGCEEEEEEC-CCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCH------HHHHHHHHHTTCCCE
T ss_pred             CCcEEEEEEE-ccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCH------HHHHHHHHHhCCCEE
Confidence            4566677776 44458999999999999999999999999999999666775      899999999999874

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=98.98  E-value=4e-10  Score=75.48  Aligned_cols=63  Identities=22%  Similarity=0.324  Sum_probs=58.0

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccce
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      |..|+-+|-.=.+|+.+|+++|..+|||.+++|++..+.++|   +..+++      +.|+++|+++||++.
T Consensus         4 t~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~------~~i~~~i~~~Gy~a~   69 (72)
T d1osda_           4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSV------QKLTKATADAGYPSS   69 (72)
T ss_dssp             EEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCH------HHHHHHHHHTTCCCE
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCH------HHHHHHHHhcCCCeE
Confidence            567889999999999999999999999999999999999999   456774      999999999999975

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=98.95  E-value=2.6e-10  Score=75.69  Aligned_cols=60  Identities=20%  Similarity=0.453  Sum_probs=55.2

Q ss_pred             EeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccce
Q 030235          102 FQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus       102 f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      |+-+|-.-.+|+..|+++|+.++||.+++|++..+.++|   +..+++      +.|+++|+++||++.
T Consensus         6 l~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~------~~i~~~i~~~Gy~~~   68 (69)
T d2qifa1           6 LQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSV------KDIADAIEDQGYDVA   68 (69)
T ss_dssp             EEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH------HHHHHHHHHTTCEEC
T ss_pred             EEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCH------HHHHHHHHHhCCccc
Confidence            778898899999999999999999999999999999999   456774      899999999999975

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=5e-10  Score=74.65  Aligned_cols=62  Identities=18%  Similarity=0.321  Sum_probs=56.4

Q ss_pred             EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccce
Q 030235          100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQ  167 (181)
Q Consensus       100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevq  167 (181)
                      ..|+-+|-.=.+|+.+|+++|+.++||.+++|++..+.++|   +..+++      +.|+++|+++||++.
T Consensus         5 ~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~------~~i~~~i~~~Gy~a~   69 (72)
T d2aw0a_           5 TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSP------ETLRGAIEDMGFDAT   69 (72)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCH------HHHHHHHHHHTSEEE
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCH------HHHHHHHHhhCCCcE
Confidence            45788898889999999999999999999999999999999   567774      999999999999974

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.87  E-value=7.8e-10  Score=74.22  Aligned_cols=63  Identities=16%  Similarity=0.260  Sum_probs=56.1

Q ss_pred             EEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-eeeccccccchHHHHHHHHHhCCccceee
Q 030235          101 YFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-EKQTTVQATGVAANLVEIIQGSGFKLQTL  169 (181)
Q Consensus       101 ~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~kqttvqatgvassLvEAIe~aGFevqtl  169 (181)
                      -|+-+|-.=.+|+.+|+++|..++||.+++|++..+.++| ..+..      .+.|+++|+++||++...
T Consensus         6 ~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~------~~~i~~~i~~~GY~v~~~   69 (73)
T d1mwza_           6 SWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI------RAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             EEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCC------HHHHHHHHHHHTCCCCBC
T ss_pred             EEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCC------HHHHHHHHHHcCCcccCC
Confidence            4888999999999999999999999999999999999999 44444      378999999999998753

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1.5e-09  Score=73.71  Aligned_cols=67  Identities=22%  Similarity=0.304  Sum_probs=60.1

Q ss_pred             cceEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235           96 DKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        96 d~l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      +.=++.|+-+|-.=.+|+.+|+++|+.++||.+++|++..+.++|   +..+++      +.|+++|+++||++.-
T Consensus         6 ~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~------~~i~~~i~~~GY~~~~   75 (79)
T d1kvja_           6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTP------KTLQEAIDDMGFDAVI   75 (79)
T ss_dssp             TCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCH------HHHHHHHHHHTCEEEE
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCH------HHHHHHHHhcCCCcEe
Confidence            344678999999999999999999999999999999999999999   456784      9999999999999853

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=98.83  E-value=1.3e-09  Score=74.03  Aligned_cols=62  Identities=24%  Similarity=0.402  Sum_probs=56.6

Q ss_pred             EEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235          101 YFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus       101 ~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      -|+=+|-.-.+|+.+|+++|..++||.+++|++..+.++|   +..+++      +.|+++|+++||++.-
T Consensus         5 ~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~------~~i~~~i~~~Gy~~~~   69 (79)
T d1p6ta2           5 EFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASV------SDLKEAVDKLGYKLKL   69 (79)
T ss_dssp             EEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCH------HHHHHHHHHHTCCEEE
T ss_pred             EEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCH------HHHHHHHHHHCCceEE
Confidence            4788898999999999999999999999999999999999   567784      9999999999999753

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=98.82  E-value=1.3e-09  Score=72.88  Aligned_cols=55  Identities=15%  Similarity=0.283  Sum_probs=49.4

Q ss_pred             CCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceeec
Q 030235          109 NETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTLN  170 (181)
Q Consensus       109 ~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl~  170 (181)
                      =.+|+.+|+++|+.++|| +|+|++..+.++|...+++      +.|.++|+++||++.-+.
T Consensus        11 C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~------~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_          11 CGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSM------DTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             SHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCH------HHHHHHHHTTTSCEEEEE
T ss_pred             chHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCH------HHHHHHHHHhCCeEEEee
Confidence            468999999999999998 5999999999999666784      899999999999987654

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.70  E-value=1.4e-08  Score=68.69  Aligned_cols=63  Identities=16%  Similarity=0.213  Sum_probs=52.9

Q ss_pred             EEEEeeccCCCCCchHHHHHHhccCC-CceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCcccee
Q 030235           99 TMYFQADGAMNETAIPAVTQALQGTE-GISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQT  168 (181)
Q Consensus        99 ~m~f~aegt~~e~cV~sVTkALE~le-GVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqt  168 (181)
                      +.-|+=+ --=++|+.+|+++|+.++ ||.+|+|+|..+.++|...+++      +.|.++|+++||++..
T Consensus         5 t~~f~V~-MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~------~~i~~~i~~~G~~~~~   68 (72)
T d1cc8a_           5 HYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPY------DFILEKIKKTGKEVRS   68 (72)
T ss_dssp             EEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCH------HHHHHHHHTTSSCEEE
T ss_pred             EEEEEEC-cCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCH------HHHHHHHHHHCCccCC
Confidence            3445554 335789999999999995 9999999999999999556774      9999999999999853