Citrus Sinensis ID: 030348

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MATLLAKAFRSVISSIAYCFCLFRYQDKFKTINVNNNMPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM
Secondary Structure (PSIPRED)
cHHHHHHHHHHHcccccEEEEcccccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHcccccEEEEEEEccccEEEEEccccHHHHHHHHHHHcccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEEEcccHHHHHHHHHHHHccccEEEEEcccccEEEEEEEccHHHHHHHHHHccccEEEccccccccccccccccccccccccccccccEEccccccccccccccccccHHHHHHccccccccccEcc
Coil and Loop (DISEMBL)
MATLLAKAFRSVISSIAYCFCLFRyqdkfktinvnnnmpkgrplslQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGkraefwpypnpplyftsannyfKDTTNEFKESYNYYrhgynvgdkhgtlpvthrgddkvsnmfnddnvnacclm
Flexible Loop (DISEMBL)
MATLLAKAFRSVISSIAYCFCLFRYQDKFKTinvnnnmpkgrplsLQTVELKVRMCCTGCERVVKNAiyklrgvdsvevelelekvtavgyvdrnkvLKAVRragkraefwpypnpplyFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM
Low Complexity Region (SEG)
MATLLAKAFRSVISSIAYCFCLFRYQDKFKTINVNNNMPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM
Disordered region (IsUnstruct)
***LLAKAFRSVISSIAYCFCLFRYQDKFKTINVNNNMPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTH*****************C***
Disordered Region (DISOPRED)
**TLLAKAFRSVISSIAYCFCLFR***********************TVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYP*******************************NVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM
Disordered Region (DISEMBL)
MATLLAKAFRSVISSIAYCFCLFRYQDKFKTINVNNNMPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM
Disordered Region (DISPRO)
*ATLLAKAFRSVISSIAYCFCLFRYQDKFKTINVN***PKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MATLLAKAFRSVISSIAYCFCLFRYQDKFKTINVNNNMPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	179	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	0.715	0.836	0.377	9e-15

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score = 79.7 bits (195), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 7/135 (5%)

Query: 46  LQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVL-KAVRRA 104
           LQTVE+KV+M C GCER V+ ++  ++GV SV +E +  KVT VGYVD NKV+ +   R 
Sbjct: 25  LQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRT 84

Query: 105 GKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKV 164
           GK+ E WPY     Y   A+ Y     ++ K    Y R   + G     L      + + 
Sbjct: 85  GKKVELWPYVP---YDVVAHPYAAGVYDK-KAPSGYVRRVDDPGVSQ--LARASSTEVRY 138

Query: 165 SNMFNDDNVNACCLM 179
           +  F+D+N  AC +M
Sbjct: 139 TTAFSDENPAACVVM 153

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
224061523	179	predicted protein [Populus trichocarpa]	0.994	0.994	0.811	9e-83
255555829	178	metal ion binding protein, putative [Ric	0.994	1.0	0.815	3e-82
224115472	178	predicted protein [Populus trichocarpa]	0.994	1.0	0.782	3e-81
359473986	179	PREDICTED: uncharacterized protein LOC10	0.994	0.994	0.777	4e-76
356535260	178	PREDICTED: uncharacterized protein LOC10	0.988	0.994	0.777	3e-75
356576630	178	PREDICTED: uncharacterized protein LOC10	0.988	0.994	0.777	1e-74
118486995	142	unknown [Populus trichocarpa]	0.793	1.0	0.908	2e-74
449456289	193	PREDICTED: heavy metal-associated isopre	0.804	0.746	0.888	1e-72
449515307	193	PREDICTED: heavy metal-associated isopre	0.804	0.746	0.888	2e-72
147768787	142	hypothetical protein VITISV_009602 [Viti	0.793	1.0	0.880	2e-71

>gi|224061523|ref|XP_002300522.1| predicted protein [Populus trichocarpa] gi|222847780|gb|EEE85327.1| predicted protein [Populus trichocarpa]

 Score =  311 bits (796), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 146/180 (81%), Positives = 166/180 (92%), Gaps = 2/180 (1%)

Query: 1   MATLLAKAFRSVIS-SIAYCFCLFRYQDKFKTINVNNNMPKGRPLSLQTVELKVRMCCTG 59
           MAT+L +AF+S +S SIAY +  FR +D  +  N+ +NMPKGRPLSLQTVELKVRMCCTG
Sbjct: 1   MATILERAFKSFLSNSIAYSYFYFR-EDHTRFENIKHNMPKGRPLSLQTVELKVRMCCTG 59

Query: 60  CERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLY 119
           CERVVKNAIYKL+G+DSVEV+LE+EKVT VGYVDRNKVLKAVRRAGKRAEFWPYPNPPLY
Sbjct: 60  CERVVKNAIYKLKGIDSVEVDLEMEKVTVVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLY 119

Query: 120 FTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM 179
           FTSAN+YFKDTT+EFKESYNYY+HGYN+ D+HGT+PV+HRGDDKVSNMFNDDNVNACCLM
Sbjct: 120 FTSANHYFKDTTSEFKESYNYYKHGYNLADRHGTIPVSHRGDDKVSNMFNDDNVNACCLM 179

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555829|ref|XP_002518950.1| metal ion binding protein, putative [Ricinus communis] gi|223541937|gb|EEF43483.1| metal ion binding protein, putative [Ricinus communis]

 Score =  309 bits (791), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 146/179 (81%), Positives = 162/179 (90%), Gaps = 1/179 (0%)

Query: 1   MATLLAKAFRSVISSIAYCFCLFRYQDKFKTINVNNNMPKGRPLSLQTVELKVRMCCTGC 60
           MAT+L +AF+S+IS+IAYC+  FR  D     N+  NMP+GRPLSLQTVELKVRMCCTGC
Sbjct: 1   MATILQRAFKSIISAIAYCYFHFR-DDHTGIRNIRYNMPRGRPLSLQTVELKVRMCCTGC 59

Query: 61  ERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLYF 120
           ERVVKNAI+KL+GVDSVEV L +EKVT VGYVDRNKVLKAVRRAGKRAEFWPYP+ PLYF
Sbjct: 60  ERVVKNAIHKLKGVDSVEVNLNMEKVTVVGYVDRNKVLKAVRRAGKRAEFWPYPDIPLYF 119

Query: 121 TSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM 179
           TSA+NYFKDTTNEFKESYNYYRHGYNVG++HG +PVTHRGDDKVSNMFNDDNVNACCLM
Sbjct: 120 TSASNYFKDTTNEFKESYNYYRHGYNVGERHGNIPVTHRGDDKVSNMFNDDNVNACCLM 178

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115472|ref|XP_002317042.1| predicted protein [Populus trichocarpa] gi|222860107|gb|EEE97654.1| predicted protein [Populus trichocarpa]

 Score =  306 bits (783), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 140/179 (78%), Positives = 161/179 (89%), Gaps = 1/179 (0%)

Query: 1   MATLLAKAFRSVISSIAYCFCLFRYQDKFKTINVNNNMPKGRPLSLQTVELKVRMCCTGC 60
           MAT L +AF+++ISSI + +  F+ +D  +  N+ +NMPKGRPLSLQTVELKVRMCC GC
Sbjct: 1   MATFLERAFKTIISSITHSYFYFQ-EDHVRIKNIRHNMPKGRPLSLQTVELKVRMCCAGC 59

Query: 61  ERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLYF 120
           ERVVKNAIYKLRG+DSVEV+LE+EKVT VGYVDRNKVLKA RRAGKRAEFWPYP+ PLYF
Sbjct: 60  ERVVKNAIYKLRGIDSVEVDLEMEKVTVVGYVDRNKVLKAARRAGKRAEFWPYPDLPLYF 119

Query: 121 TSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM 179
           TSANNYFKDT +EFKESYNYY+HGYN+ D+HGT+PV+HRGDDKVSNMFNDDNVNACCLM
Sbjct: 120 TSANNYFKDTASEFKESYNYYKHGYNLADRHGTIPVSHRGDDKVSNMFNDDNVNACCLM 178

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473986|ref|XP_002277877.2| PREDICTED: uncharacterized protein LOC100261608 [Vitis vinifera]

 Score =  289 bits (739), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 140/180 (77%), Positives = 155/180 (86%), Gaps = 2/180 (1%)

Query: 1   MATLLAKAFRSVISSIAYCFCLFRYQDKFKTIN-VNNNMPKGRPLSLQTVELKVRMCCTG 59
           MAT L +   S  S I  C   F YQD  K I+ +N  MPKGRPLSLQTVELKVRMCCTG
Sbjct: 1   MATALERRLASFFSFIT-CSNYFLYQDNHKGIDHINFKMPKGRPLSLQTVELKVRMCCTG 59

Query: 60  CERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLY 119
           CERVVKNAI+KLRGVDSVEV+L +EKVT VGYVDRNKVLKAVRR+GKRAEFWPYP+PPLY
Sbjct: 60  CERVVKNAIFKLRGVDSVEVDLGMEKVTVVGYVDRNKVLKAVRRSGKRAEFWPYPDPPLY 119

Query: 120 FTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM 179
           FTS+N+YFKD TN++KESYNY+RHGYNV D+HGT+P THRGDDKVSNMFNDDNVNACCLM
Sbjct: 120 FTSSNDYFKDLTNDYKESYNYWRHGYNVADRHGTIPPTHRGDDKVSNMFNDDNVNACCLM 179

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535260|ref|XP_003536166.1| PREDICTED: uncharacterized protein LOC100806253 [Glycine max]

 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 140/180 (77%), Positives = 156/180 (86%), Gaps = 3/180 (1%)

Query: 1   MATLLAKAFRSVISSIAYCFCLFRYQDKFKTINVNNNMPK-GRPLSLQTVELKVRMCCTG 59
           MA+LL KAF S ISS  Y   LF YQD  K I  N  MPK GRPLSLQTVELKVRMCCTG
Sbjct: 1   MASLLQKAFGSEISSFIYR--LFIYQDHNKGIPRNFKMPKKGRPLSLQTVELKVRMCCTG 58

Query: 60  CERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLY 119
           CERVVKNAIYKL+G+DSVEV+LE+E+VT  GYVDRNKVLKAVRRAGKRAEFWPYPNPPLY
Sbjct: 59  CERVVKNAIYKLKGIDSVEVDLEMERVTVGGYVDRNKVLKAVRRAGKRAEFWPYPNPPLY 118

Query: 120 FTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM 179
           FT+A++YFKDT +EFKESYNYYRHGYN+ ++HGT+ V+HRGDD VSNMFNDDNVNAC +M
Sbjct: 119 FTTADHYFKDTAHEFKESYNYYRHGYNLPERHGTMHVSHRGDDNVSNMFNDDNVNACSIM 178

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576630|ref|XP_003556433.1| PREDICTED: uncharacterized protein LOC100788652 [Glycine max]

 Score =  284 bits (726), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 140/180 (77%), Positives = 156/180 (86%), Gaps = 3/180 (1%)

Query: 1   MATLLAKAFRSVISSIAYCFCLFRYQDKFKTINVNNNMPK-GRPLSLQTVELKVRMCCTG 59
           MA+LL KAF S ISS  Y   LF YQ+  K I  N  MPK GRPLSLQTVELKVRMCCTG
Sbjct: 1   MASLLQKAFGSEISSFIYR--LFIYQNHNKGIPRNFKMPKKGRPLSLQTVELKVRMCCTG 58

Query: 60  CERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLY 119
           CERVVKNAIYKL+G+DSVEV+LE+E+V   GYVDRNKVLKAVRRAGKRAEFWPYPNPPLY
Sbjct: 59  CERVVKNAIYKLKGIDSVEVDLEMERVRVGGYVDRNKVLKAVRRAGKRAEFWPYPNPPLY 118

Query: 120 FTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM 179
           FTSA++YFKDTT+EFKESYNYYRHGYN+ ++HGT+ V+HRGDD VSNMFNDDNVNAC +M
Sbjct: 119 FTSADHYFKDTTHEFKESYNYYRHGYNLPERHGTMHVSHRGDDNVSNMFNDDNVNACHIM 178

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486995|gb|ABK95329.1| unknown [Populus trichocarpa]

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 129/142 (90%), Positives = 140/142 (98%)

Query: 38  MPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKV 97
           MPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKL+G+DSVEV+LE+EKVT VGYVDRNKV
Sbjct: 1   MPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLKGIDSVEVDLEMEKVTVVGYVDRNKV 60

Query: 98  LKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVT 157
           LKAVRRAGKRAEFWPYPNPPLYFTSAN+YFKDTT+EFKESYNYY+HGYN+ D+HGT+PV+
Sbjct: 61  LKAVRRAGKRAEFWPYPNPPLYFTSANHYFKDTTSEFKESYNYYKHGYNLADRHGTIPVS 120

Query: 158 HRGDDKVSNMFNDDNVNACCLM 179
           HRGDDKVSNMFNDDNVNACCLM
Sbjct: 121 HRGDDKVSNMFNDDNVNACCLM 142

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456289|ref|XP_004145882.1| PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cucumis sativus]

 Score =  277 bits (708), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 128/144 (88%), Positives = 137/144 (95%)

Query: 36  NNMPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRN 95
           NNMPK +PLSLQTVELKVRMCCTGCERVVK+AIYKLRGVDSVEVELELEKVT +GYVDRN
Sbjct: 50  NNMPKPKPLSLQTVELKVRMCCTGCERVVKDAIYKLRGVDSVEVELELEKVTVIGYVDRN 109

Query: 96  KVLKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLP 155
           KVLK VRRAGKRAEFWPYP PPLYFTSA +YFKDTT EFKESYNYYRHGYNVG+KHGT+P
Sbjct: 110 KVLKVVRRAGKRAEFWPYPEPPLYFTSATDYFKDTTREFKESYNYYRHGYNVGEKHGTIP 169

Query: 156 VTHRGDDKVSNMFNDDNVNACCLM 179
           ++HRGDDKVSNMFNDDNVNAC +M
Sbjct: 170 MSHRGDDKVSNMFNDDNVNACHVM 193

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515307|ref|XP_004164691.1| PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cucumis sativus]

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 128/144 (88%), Positives = 137/144 (95%)

Query: 36  NNMPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRN 95
           NNMPK +PLSLQTVELKVRMCCTGCERVVK+AIYKLRGVDSVEVELELEKVT +GYVDRN
Sbjct: 50  NNMPKPKPLSLQTVELKVRMCCTGCERVVKDAIYKLRGVDSVEVELELEKVTVIGYVDRN 109

Query: 96  KVLKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLP 155
           KVLK VRRAGKRAEFWPYP PPLYFTSA +YFKDTT EFKESYNYYRHGYNVG+KHGT+P
Sbjct: 110 KVLKVVRRAGKRAEFWPYPEPPLYFTSATDYFKDTTREFKESYNYYRHGYNVGEKHGTIP 169

Query: 156 VTHRGDDKVSNMFNDDNVNACCLM 179
           ++HRGDDKVSNMFNDDNVNAC +M
Sbjct: 170 MSHRGDDKVSNMFNDDNVNACHVM 193

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147768787|emb|CAN73635.1| hypothetical protein VITISV_009602 [Vitis vinifera] gi|297742477|emb|CBI34626.3| unnamed protein product [Vitis vinifera]

 Score =  273 bits (698), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 125/142 (88%), Positives = 137/142 (96%)

Query: 38  MPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKV 97
           MPKGRPLSLQTVELKVRMCCTGCERVVKNAI+KLRGVDSVEV+L +EKVT VGYVDRNKV
Sbjct: 1   MPKGRPLSLQTVELKVRMCCTGCERVVKNAIFKLRGVDSVEVDLGMEKVTVVGYVDRNKV 60

Query: 98  LKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVT 157
           LKAVRR+GKRAEFWPYP+PPLYFTS+N+YFKD TN++KESYNY+RHGYNV D+HGT+P T
Sbjct: 61  LKAVRRSGKRAEFWPYPDPPLYFTSSNDYFKDLTNDYKESYNYWRHGYNVADRHGTIPPT 120

Query: 158 HRGDDKVSNMFNDDNVNACCLM 179
           HRGDDKVSNMFNDDNVNACCLM
Sbjct: 121 HRGDDKVSNMFNDDNVNACCLM 142

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
TAIR|locus:1005716648	178	AT2G18196 [Arabidopsis thalian	0.949	0.955	0.706	3.2e-65
TAIR|locus:4010713877	183	AT4G10465 [Arabidopsis thalian	1.0	0.978	0.661	1.7e-59
TAIR|locus:2202265	159	AT1G06330 "AT1G06330" [Arabido	0.754	0.849	0.424	1.2e-24
TAIR|locus:2157457	149	HIPP21 "heavy metal associated	0.793	0.953	0.358	8e-21
TAIR|locus:2101343	140	AT3G48970 "AT3G48970" [Arabido	0.737	0.942	0.401	9.2e-20
TAIR|locus:2135277	158	AT4G39700 [Arabidopsis thalian	0.709	0.803	0.413	1.2e-19
TAIR|locus:2026336	152	HIPP20 "heavy metal associated	0.703	0.828	0.417	3.1e-19
TAIR|locus:4515103273	166	AT3G56891 [Arabidopsis thalian	0.659	0.710	0.398	3.1e-19
TAIR|locus:2017759	152	HIPP22 "heavy metal associated	0.692	0.815	0.392	1.4e-18
TAIR|locus:2133544	150	AT4G08570 "AT4G08570" [Arabido	0.698	0.833	0.392	5.8e-18

TAIR|locus:1005716648 AT2G18196 [Arabidopsis thaliana (taxid:3702)]

 Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
 Identities = 125/177 (70%), Positives = 149/177 (84%)

Query:     9 FRSVISSIAYCFCLFRY---QDKFKTINVNNN---MPKGRPLSLQTVELKVRMCCTGCER 62
             F S IS+I YC   FRY   + KFK+++  N+   MP  RPLSLQT++LKVRMCC+GCER
Sbjct:     3 FGSFISTITYCL-FFRYPHKKPKFKSVSHLNHYHTMPMARPLSLQTIDLKVRMCCSGCER 61

Query:    63 VVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLYFTS 122
             VVK+AIYKLRGVDSVEV LE+E+VT VGYV+R KVLKAVRRAGKRAEFWPYP+ P YFTS
Sbjct:    62 VVKHAIYKLRGVDSVEVNLEMERVTVVGYVERKKVLKAVRRAGKRAEFWPYPDMPRYFTS 121

Query:   123 ANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACCLM 179
             +++YFKDTT EF+ESYNYYRHGYN+ D+HG + VT+RGDDK+SN FNDDNV+AC LM
Sbjct:   122 SDHYFKDTTREFRESYNYYRHGYNLSDRHGNIHVTNRGDDKMSNFFNDDNVHACSLM 178

GO:0005576 "extracellular region" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:4010713877 AT4G10465 [Arabidopsis thaliana (taxid:3702)]

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 121/183 (66%), Positives = 142/183 (77%)

Query:     1 MATLLAKAFRSVISSIAYCFCLFRYQ---DKFKTINVNN-NMPKGRPLSLQTVELKVRMC 56
             M++L+ K+  S++S IA  F   R +   +   T +++   M + RPLSLQTVELKVRMC
Sbjct:     1 MSSLIVKSLGSIVSIIARIFFFRRSRPVSNPRTTAHISYFRMSRKRPLSLQTVELKVRMC 60

Query:    57 CTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNP 116
             CTGC R+V+NAI KLRGVDSVEV+ EL +V  VGYVDRNKVLKAVRRAGKRAEF PYP P
Sbjct:    61 CTGCVRIVRNAISKLRGVDSVEVDKELGRVRVVGYVDRNKVLKAVRRAGKRAEFSPYPEP 120

Query:   117 PLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNAC 176
             PLYFTS  NYF D + EFKESYNYYRHGYN  ++HG +PV  RGDD+VSNMFNDDNVNAC
Sbjct:   121 PLYFTSTQNYFVDPSKEFKESYNYYRHGYNGTEQHGNIPVGSRGDDRVSNMFNDDNVNAC 180

Query:   177 CLM 179
              LM
Sbjct:   181 RLM 183

GO:0005576 "extracellular region" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2202265 AT1G06330 "AT1G06330" [Arabidopsis thaliana (taxid:3702)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 65/153 (42%), Positives = 90/153 (58%)

Query:    44 LSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRR 103
             + LQT+E++V M C GCE  VKNA+ K+RGVD+VE+++  +KVT  GY D+ KVLK VR+
Sbjct:     8 IQLQTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRK 67

Query:   104 AGKRAEFWPYP-NPPLYFTSANN--YFKDTT------NEFK----ESYNYYRHGYNVGD- 149
              G+RAE W  P NP     S++N  YF +        N        SYNYY+HGY+  D 
Sbjct:    68 TGRRAELWQLPYNPDHMGGSSSNGGYFYNPQGCNGPINHAAPVPTSSYNYYKHGYDSNDY 127

Query:   150 -KHGTLPVTHRG--DDKVSNMFNDDNVNACCLM 179
               +   PV H      +  + F+D+N NAC +M
Sbjct:   128 SSYRHHPV-HASIFSHQTGSKFSDENPNACSIM 159

GO:0005507 "copper ion binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2157457 HIPP21 "heavy metal associated isoprenylated plant protein 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 56/156 (35%), Positives = 87/156 (55%)

Query:    23 FRYQDKFKTINVNNNMPKGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELE 82
             F Y   F +    N   K +PL  QTV++KV+M C GCER V+N + +++GV SVEV  +
Sbjct:     4 FDYISSFCSYTYANAKTKRKPL--QTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNRK 61

Query:    83 LEKVTAVGYVDRNKVLKAVRRAGKRAEFWPY-PNPPLYFTSANNYFKDTTNEFKESYNYY 141
               ++T  G+VD NKVLK V+  GK+AEFWPY P   +Y+  A   +     + +    + 
Sbjct:    62 QSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMY-----DKRAPAGHI 116

Query:   142 RHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNVNACC 177
             R+         + P  +  ++   ++F+DDNV+A C
Sbjct:   117 RNPTQ------SFPTANAPEENYVSLFSDDNVHAAC 146

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;IGI

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2101343 AT3G48970 "AT3G48970" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 55/137 (40%), Positives = 79/137 (57%)

Query:    48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY-VDRNKVLKAVRRAG 105
             TVE++V  + C GC   ++  + KL+GV+ VEVE+E +KVTA GY ++  KVLKAVRRAG
Sbjct:     4 TVEIRVPNLDCEGCASKLRKTLLKLKGVEEVEVEMETQKVTARGYRLEEKKVLKAVRRAG 63

Query:   106 KRAEFWPYPNPPLYFTSANNYFKDTTNEF-KESYNYYRHG--YNVGDKHGTLPVTHRGDD 162
             K AE WPY     +F S   Y    TN +  +++     G  +          V   GD+
Sbjct:    64 KAAELWPYRLGNSHFASFYKYPSYVTNHYYSDAHRTDPTGGVHTFFHTPADYSVAVAGDE 123

Query:   163 KVSNMFNDDNVNACCLM 179
               ++MF+DDN +AC +M
Sbjct:   124 IAASMFSDDNPHACTIM 140

GO:0005507 "copper ion binding" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2135277 AT4G39700 [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 55/133 (41%), Positives = 76/133 (57%)

Query:    47 QTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGK 106
             QTVELKVRM C GC   +KN++  L+GV +VE+  + +KVT  GY D +KVLK  +  GK
Sbjct:    32 QTVELKVRMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVLKKAKATGK 91

Query:   107 RAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSN 166
             +AE WPY  P  Y   A  Y     ++ K    Y R   +     GT+ V +  D   ++
Sbjct:    92 KAEIWPYV-P--YNLVAQPYIAQAYDK-KAPPGYVRK-VDPNVTTGTMAVYY-DDPSYTS 145

Query:   167 MFNDDNVNACCLM 179
             +F+DDN NAC +M
Sbjct:   146 LFSDDNPNACSIM 158

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2026336 HIPP20 "heavy metal associated isoprenylated plant protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 56/134 (41%), Positives = 77/134 (57%)

Query:    46 LQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAG 105
             +QTV +KV+M C GCER VKNA+  ++GV SVEV  ++ KVT  GYV+  KVLK + R G
Sbjct:    27 MQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTG 86

Query:   106 KRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVS 165
             K+AE WPY  P  Y   A  Y   T ++ K    Y R       +   LP     ++   
Sbjct:    87 KKAEIWPYV-P--YNMVAYPYAVGTYDK-KAPAGYVRKSEQ--SQLQLLPGAP--ENHYI 138

Query:   166 NMFNDDNVNACCLM 179
             ++F+D+N NAC +M
Sbjct:   139 SLFSDENPNACTVM 152

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:4515103273 AT3G56891 [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 49/123 (39%), Positives = 76/123 (61%)

Query:    43 PLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVR 102
             P++L  VEL V M C GCE+ V+ AI KL GVD+VE++++ +KVT  GYVDR +VLK V+
Sbjct:    12 PIALSIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVK 71

Query:   103 RAGKRAEFWPYPNPPLY---FTSANNYFKDTTNEFKESYNYY-RHG-YNVGDKHGTLPVT 157
             R G+ AE+WP+P    Y   +T  + + + +  +  ++ +Y  ++  Y+V D   T   T
Sbjct:    72 RTGRTAEYWPFPYNGYYGDYYTYPSQHLEQSDQKIYQTISYSGKYDFYDVDDFQNTNNST 131

Query:   158 HRG 160
               G
Sbjct:   132 ING 134

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2017759 HIPP22 "heavy metal associated isoprenylated plant protein 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 53/135 (39%), Positives = 77/135 (57%)

Query:    46 LQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAG 105
             +QTV +KV++ C GCER +KNA+  ++G  SVEV  ++ KVT  GYVD  KVLK V+  G
Sbjct:    28 MQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVEVNRKMHKVTVSGYVDPKKVLKTVQSTG 87

Query:   106 KR-AEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKV 164
             K+ AE WPY   P Y   A  Y     ++ +    + R       + G+       DDK+
Sbjct:    88 KKKAELWPYV--P-YTMVAYPYAAGAYDK-RAPPGFVRKSEQAQAQPGST------DDKL 137

Query:   165 SNMFNDDNVNACCLM 179
              ++F+D+N NAC +M
Sbjct:   138 MSLFSDENPNACTVM 152

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2133544 AT4G08570 "AT4G08570" [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 53/135 (39%), Positives = 77/135 (57%)

Query:    46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRA 104
             +QTV L+V R+ C GCER +K+ +  ++GV SV+V+++L+KVT  GY+D  KVL+A +  
Sbjct:    25 MQTVALRVARIDCEGCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYIDPKKVLEAAKST 84

Query:   105 GKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKV 164
              K+ E WPY  P  Y   AN Y     ++ K   N  R    V D       T   DD  
Sbjct:    85 KKKVELWPYV-P--YTMVANPYISQAYDK-KAPPNMVR---KVPDTASVNETTV--DDSY 135

Query:   165 SNMFNDDNVNACCLM 179
             + MF+D+N N+C +M
Sbjct:   136 TIMFSDENPNSCAIM 150

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	179
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	5e-11
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	3e-08
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	3e-07
PLN02957	238	PLN02957, PLN02957, copper, zinc superoxide dismut	3e-06
PRK11033	741	PRK11033, zntA, zinc/cadmium/mercury/lead-transpor	5e-04
PRK13748	561	PRK13748, PRK13748, putative mercuric reductase; P	8e-04
TIGR02052	92	TIGR02052, MerP, mercuric transport protein peripl	0.001

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 55.3 bits (134), Expect = 5e-11
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 50  ELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGK 106
           EL V  M C GC   ++ A+ KL GV+SVEV+LE  K T      V   ++L+A+  AG 
Sbjct: 1   ELSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIEDAGY 60

Query: 107 RAE 109
           +A 
Sbjct: 61  KAR 63

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 48.0 bits (115), Expect = 3e-08
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 49  VELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDR---NKVLKAVRRAG 105
                 M C GC + V+ A+ KL GV SV V+LE  KVT  G  D     K+ KA+ +AG
Sbjct: 1   TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAG 60

Query: 106 KR 107
             
Sbjct: 61  YE 62

Length = 62

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 45.4 bits (108), Expect = 3e-07
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 46  LQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV---GYVDRNKVLKAV 101
           +    LKV  M C  C + V+ A+ ++ GV SV+V+LE    T       VD   +++A+
Sbjct: 1   MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAI 60

Query: 102 RRAGKRAEFW 111
             AG + E  
Sbjct: 61  EDAGYKVEEI 70

Length = 71

>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query: 50  ELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRA 108
           E  V M C GC   VKN +  L GV +VEV+L  + V  +G      +  A+ + G++A
Sbjct: 9   EFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKA 67

Length = 238

>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 55  MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVD-RNKVLKAVRRAG 105
           M C  C R V+NA+ +L GV+ V+V    EK+      D R +V  AV++AG
Sbjct: 62  MDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAG 113

Length = 741

>gnl|CDD|184298 PRK13748, PRK13748, putative mercuric reductase; Provisional

 Score = 39.0 bits (91), Expect = 8e-04
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 49  VELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELE--LEKVTAVGYVDRNKVLKAVRRAG 105
             LK+  M C  C   VK+A+ K+ GV S +V       ++        + +  AV   G
Sbjct: 2   TTLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVAGLG 61

Query: 106 KRAEFWPYPNPP 117
            RA     P   
Sbjct: 62  YRATLADAPPTD 73

Length = 561

>gnl|CDD|131107 TIGR02052, MerP, mercuric transport protein periplasmic component

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 47  QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAG 105
           QTV L+V  M C  C   V+ A+ K+ GV   EV  +  K+  V + D    +KA+  A 
Sbjct: 23  QTVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFK-TKLAVVTFDDEKTNVKALTEAT 81

Query: 106 KRAEF 110
             A +
Sbjct: 82  TDAGY 86

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403) [Cellular processes, Detoxification]. Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	179
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.46
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.36
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.33
KOG4656	247	consensus Copper chaperone for superoxide dismutas	98.95
PLN02957	238	copper, zinc superoxide dismutase	98.44
PRK10671	834	copA copper exporting ATPase; Provisional	98.3
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.09
TIGR00003	68	copper ion binding protein. This model describes a	97.85
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.7
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.35
PRK10671	834	copA copper exporting ATPase; Provisional	97.2
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.12
TIGR02052	92	MerP mercuric transport protein periplasmic compon	94.89
cd00371	63	HMA Heavy-metal-associated domain (HMA) is a conse	88.39
PRK13748	561	putative mercuric reductase; Provisional	87.9
COG1888	97	Uncharacterized protein conserved in archaea [Func	84.66
PF01206	70	TusA: Sulfurtransferase TusA; InterPro: IPR001455	83.61
PF02680	95	DUF211: Uncharacterized ArCR, COG1888; InterPro: I	83.37

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.46  E-value=5.4e-13  Score=86.10  Aligned_cols=58  Identities=40%  Similarity=0.645  Sum_probs=54.3

Q ss_pred             EEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcc
Q 030348           50 ELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKR  107 (179)
Q Consensus        50 ~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~  107 (179)
                      +|+| ||+|++|+++|+++|.+++||.++.+|+.+++++|.++   +++++|.++|+++||+
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence            4889 99999999999999999999999999999999999976   4679999999999985

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.36  E-value=6.8e-12  Score=83.58  Aligned_cols=65  Identities=34%  Similarity=0.517  Sum_probs=57.9

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEE--e-cCCHHHHHHHHHhcCcceEEc
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV--G-YVDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~--g-~~~~~~i~~~i~~~G~~a~~~  111 (179)
                      .+..|+| ||+|++|+.+|+++|.+++||.++++|+..+++.|.  + .++.++|.++|+++||.+..+
T Consensus         2 ~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~~   70 (71)
T COG2608           2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEEI   70 (71)
T ss_pred             ceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeeec
Confidence            3568999 999999999999999999999999999999766665  4 379999999999999988754

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.33  E-value=1.2e-11  Score=82.78  Aligned_cols=68  Identities=49%  Similarity=0.859  Sum_probs=62.6

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcC-cceEEccC
Q 030348           46 LQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAG-KRAEFWPY  113 (179)
Q Consensus        46 ~~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G-~~a~~~~~  113 (179)
                      .++.++++.|+|++|..+|++.|..++||.++.+|...++++|.|.+++..|++.|++.| .++++|..
T Consensus         4 ~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~~~   72 (73)
T KOG1603|consen    4 IKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELWKV   72 (73)
T ss_pred             ccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEecC
Confidence            456778889999999999999999999999999999999999999999999999999888 78887743

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=98.95  E-value=3.5e-09  Score=83.00  Aligned_cols=71  Identities=27%  Similarity=0.458  Sum_probs=67.1

Q ss_pred             eEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccCCCCC
Q 030348           47 QTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPP  117 (179)
Q Consensus        47 ~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~~~~~  117 (179)
                      -+.+|.|.|+|++|++.|++.|..++||.+|+||+.++.|.|.+...+.+|.+.|+.+|.+|.+...+.+.
T Consensus         7 ~~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~Avl~G~G~ps   77 (247)
T KOG4656|consen    7 YEAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRDAVLRGAGKPS   77 (247)
T ss_pred             eeEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHHhhChheEEecCCchh
Confidence            46789999999999999999999999999999999999999999999999999999999999999887764

>PLN02957 copper, zinc superoxide dismutase

Probab=98.44  E-value=2.4e-06  Score=69.41  Aligned_cols=72  Identities=31%  Similarity=0.479  Sum_probs=64.2

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccCCCCC
Q 030348           46 LQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPP  117 (179)
Q Consensus        46 ~~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~~~~~  117 (179)
                      .+++++.++|.|+.|+.+|++.|.+++||..+.+++..++++|.+......+.+.+++.||.++++....+.
T Consensus         5 ~~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~~   76 (238)
T PLN02957          5 ELLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKARLIGQGDPE   76 (238)
T ss_pred             cEEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHHHcCCcEEEecCCCcc
Confidence            345678889999999999999999999999999999999999987778889999999999999988775554

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.30  E-value=2.2e-06  Score=80.85  Aligned_cols=64  Identities=20%  Similarity=0.447  Sum_probs=57.1

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEcc
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      ++++++| ||+|.+|+.+|+++|++++||.++++++.  +.+|.+..+.+.+.+++++.||+++...
T Consensus         3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   67 (834)
T PRK10671          3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIKQAGYDASVSH   67 (834)
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHHhcCCcccccc
Confidence            4678999 99999999999999999999999999994  5566666789999999999999998753

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.09  E-value=1.1e-05  Score=74.84  Aligned_cols=63  Identities=35%  Similarity=0.564  Sum_probs=56.9

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CC-HHHHHHHHHhcCcceEE
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VD-RNKVLKAVRRAGKRAEF  110 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~-~~~i~~~i~~~G~~a~~  110 (179)
                      .+..+.| ||+|..|+.+|| +|++++||.++.+|+.++++.|..+   .+ .+.+..++++.||.+..
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~~   69 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSARL   69 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCccccc
Confidence            3567999 999999999999 9999999999999999999999854   45 78999999999998876

>TIGR00003 copper ion binding protein

Probab=97.85  E-value=0.00024  Score=43.00  Aligned_cols=60  Identities=25%  Similarity=0.354  Sum_probs=50.5

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcc
Q 030348           48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKR  107 (179)
Q Consensus        48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~  107 (179)
                      +..+.+ |+.|..|...+++.+...+++....+++...++.+...   .+...+...+...|+.
T Consensus         3 ~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   66 (68)
T TIGR00003         3 KFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGYE   66 (68)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence            456899 99999999999999999999999999999998888742   4667777777777764

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.70  E-value=0.00011  Score=68.72  Aligned_cols=70  Identities=29%  Similarity=0.502  Sum_probs=64.1

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccCCCC
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPYPNP  116 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~~~~  116 (179)
                      +++.|.| ||.|.+|+.+|++.+.+++||.+++++..++++.|..+   ..+.++.+.|+.+|+++.+.+....
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~~~~~~~~~~~  219 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGFEASVRPYGDT  219 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhcccceeeecccc
Confidence            6889999 99999999999999999999999999999999999865   7899999999999999888775543

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.35  E-value=0.00044  Score=64.89  Aligned_cols=63  Identities=21%  Similarity=0.373  Sum_probs=58.7

Q ss_pred             cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEccCCCC
Q 030348           54 RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFWPYPNP  116 (179)
Q Consensus        54 gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~~~~~~  116 (179)
                      ||+|..|.+.|++++.+.+||.+..+++.++..+|..+  ++++.+.+.+++.|+++++......
T Consensus         2 gmtc~ac~~si~~~~~~~~g~~~i~vsl~~~~~~v~~~~~~~~~~i~~~ied~gf~~~~~~~~~~   66 (951)
T KOG0207|consen    2 GMTCSACSNSIEKAISRKPGVQKIEVSLAQKRANVSYDNIVSPESIKETIEDMGFEASLLSDSEI   66 (951)
T ss_pred             CccHHHHhhhHHHHHhcCCCceeEEEEeccccceEEEeeccCHHHHHHHhhcccceeeecccCcc
Confidence            89999999999999999999999999999999998865  8999999999999999999877664

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.20  E-value=0.0013  Score=62.28  Aligned_cols=64  Identities=28%  Similarity=0.452  Sum_probs=56.9

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEc
Q 030348           48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~  111 (179)
                      ++.+.+ ||+|..|...+++.+.+++||.++.+++..+++.+.+..+.+++.+.+++.|+.+.++
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~~~Gy~a~~~  164 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAI  164 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHHhcCCCcccc
Confidence            567889 9999999999999999999999999999999888876667888888999999987654

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.12  E-value=0.003  Score=59.17  Aligned_cols=67  Identities=34%  Similarity=0.371  Sum_probs=55.0

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec-CCHHHHHHHHHhcCcceEEc
Q 030348           45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY-VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~-~~~~~i~~~i~~~G~~a~~~  111 (179)
                      ..++..+.+ ||+|..|..++++.+.+++||.++.+++..+++.+..+ ...+++.+.+++.|+++..+
T Consensus        51 ~~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~~~Gy~a~~~  119 (741)
T PRK11033         51 SGTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGFSLRDE  119 (741)
T ss_pred             CCceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccchHHHHHHHHhcccccccc
Confidence            345677899 99999999999999999999999999999998887643 12267778888899887544

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=94.89  E-value=0.63  Score=30.32  Aligned_cols=63  Identities=27%  Similarity=0.404  Sum_probs=47.3

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEe---cCCHHHHHHHHHhcCcceEE
Q 030348           48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVG---YVDRNKVLKAVRRAGKRAEF  110 (179)
Q Consensus        48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g---~~~~~~i~~~i~~~G~~a~~  110 (179)
                      +..+.+ ++.|..|...++..+....++....++....+..+..   ..+...+...+++.|+.+++
T Consensus        24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (92)
T TIGR02052        24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYPSSL   90 (92)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            456778 9999999999999999999988888888777755542   13555665666777776544

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

Probab=88.39  E-value=2.5  Score=22.47  Aligned_cols=54  Identities=43%  Similarity=0.642  Sum_probs=36.4

Q ss_pred             EE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcC
Q 030348           52 KV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAG  105 (179)
Q Consensus        52 ~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G  105 (179)
                      .+ ++.|..|...++..+....++.....+.......+...  .+...+...+...+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   59 (63)
T cd00371           3 SVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIEDAG   59 (63)
T ss_pred             eECCeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEEECCCCCHHHHHHHHHHcC
Confidence            35 78899999999998888888877777776666555432  24444434444443

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.

>PRK13748 putative mercuric reductase; Provisional

Probab=87.90  E-value=4  Score=36.76  Aligned_cols=65  Identities=29%  Similarity=0.393  Sum_probs=51.2

Q ss_pred             EEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEccCC
Q 030348           50 ELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFWPYP  114 (179)
Q Consensus        50 ~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~~~~  114 (179)
                      .+.+ ++.|..|..+++..+...+++....++.......+...  .+...+...+.+.|+..+.+...
T Consensus         3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~~~g~~~~~~~~~   70 (561)
T PRK13748          3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVAGLGYRATLADAP   70 (561)
T ss_pred             EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCeeeccCcc
Confidence            4668 99999999999999999999998899988887666532  45666666778888887666553

>COG1888 Uncharacterized protein conserved in archaea [Function unknown]

Probab=84.66  E-value=11  Score=26.17  Aligned_cols=67  Identities=19%  Similarity=0.242  Sum_probs=44.7

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeC-----C--ccEEEEEec-CCHHHHHHHHHhcCcceEEcc
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVEL-----E--LEKVTAVGY-VDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~-----~--~~~v~V~g~-~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      .+++.+.+ .-+-+--.--+-+.|.+++||..|++..     +  .-+++|.|. ++-++|.+.|++.|.-..-+.
T Consensus         5 iRRlVLDvlKP~~~p~ive~A~~lskl~gVegVNItv~eiD~et~~~~itIeG~~ldydei~~~iE~~Gg~IHSiD   80 (97)
T COG1888           5 IRRLVLDVLKPHRGPTIVELALELSKLEGVEGVNITVTEIDVETENLKITIEGTNLDYDEIEEVIEELGGAIHSID   80 (97)
T ss_pred             ceeeeeeecCCcCCCcHHHHHHHHhhcCCcceEEEEEEEeeehhcceEEEEEcCCCCHHHHHHHHHHcCCeeeehh
Confidence            44556666 4333333445667788888887776433     2  345566776 999999999999998766543

>PF01206 TusA: Sulfurtransferase TusA; InterPro: IPR001455 SirA functions as a response regulator as part of a two-component system, where BarA is the sensor kinase

Probab=83.61  E-value=5.8  Score=25.34  Aligned_cols=53  Identities=13%  Similarity=0.056  Sum_probs=38.8

Q ss_pred             EEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEc
Q 030348           50 ELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        50 ~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~  111 (179)
                      ++.+ |+.|+...-+++++|.+++.-         +.+.|..+  ...+.|...++..|++...+
T Consensus         2 ~lD~rg~~CP~Pll~~~~~l~~l~~G---------~~l~v~~d~~~~~~di~~~~~~~g~~~~~~   57 (70)
T PF01206_consen    2 TLDLRGLSCPMPLLKAKKALKELPPG---------EVLEVLVDDPAAVEDIPRWCEENGYEVVEV   57 (70)
T ss_dssp             EEECSS-STTHHHHHHHHHHHTSGTT----------EEEEEESSTTHHHHHHHHHHHHTEEEEEE
T ss_pred             EEeCCCCCCCHHHHHHHHHHHhcCCC---------CEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence            5778 999999999999999997432         33444433  55678899999999986554

This system increases the expression of virulence genes and decreases the expression of motility genes []. BarA phosphorylates SirA, thereby activating the protein. Phosphorylated SirA directly activates virulence expression by interacting with hilA and hilC promoters, while repressing the flagellar regulon indirectly by binding to the csrB promoter, which in turn affects flagellar gene expression. Orthologues of SirA from Salmonella spp. can be found throughout proteobacteria, such as GacA in Psuedomonas spp., VarA in Vibrio cholerae, ExpA in Erwinia carotovora, LetA in Legionella pneumophila, and UvrY in Escherichia coli []. A sensor kinase for SirA is present in each of these organisms as well; the sensor kinase is known as BarA in E. coli and Salmonella spp., but has different names in other genera. In different species, SirA/BarA orthologues are required for virulence gene expression, exoenzyme and antibiotic production, motility, and biofilm formation. The structure of SirA consists of an alpha/beta sandwich with a beta-alpha-beta-alpha-beta(2) fold, comprising a mixed four-stranded beta-sheet stacked against two alpha-helices, both of which are nearly parallel to the strands of the beta-sheet []. Several uncharacterised bacterial proteins (73 to 81 amino-acid residues in length) that contain a well-conserved region in their N-terminal region show structural similarity to the SirA protein, including the E. coli protein YedF (P0AA31 from SWISSPROT), and other members of the UPF0033 family.; GO: 0016783 sulfurtransferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 3LVJ_D 3LVK_B 1DCJ_A 3HZ7_A 1JDQ_A 1JE3_A 1PAV_A.

>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function

Probab=83.37  E-value=6.5  Score=27.46  Aligned_cols=65  Identities=23%  Similarity=0.321  Sum_probs=43.0

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEe-----CCccE--EEEEec-CCHHHHHHHHHhcCcceEEc
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVE-----LELEK--VTAVGY-VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd-----~~~~~--v~V~g~-~~~~~i~~~i~~~G~~a~~~  111 (179)
                      .+++.|.| .-+- --.-.+-+.|.+++||..|++.     ..+..  ++|.|. ++.++|.++|++.|.-+.-+
T Consensus         4 irRlVLDVlKP~~-p~i~e~A~~l~~~~gV~gVnitv~EvD~ete~lkitiEG~~id~d~i~~~Ie~~Gg~IHSI   77 (95)
T PF02680_consen    4 IRRLVLDVLKPHE-PSIVELAKALSELEGVDGVNITVVEVDVETENLKITIEGDDIDFDEIKEAIEELGGVIHSI   77 (95)
T ss_dssp             EEEEEEEEEEESS-S-HHHHHHHHHTSTTEEEEEEEEEEE-SSEEEEEEEEEESSE-HHHHHHHHHHTT-EEEEE
T ss_pred             eeEEEEEeecCCC-CCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEeCCCCHHHHHHHHHHcCCeEEee
Confidence            45666777 3333 3344667789999998877654     34443  455676 99999999999999866544

; PDB: 3BPD_I 2RAQ_F 2X3D_E.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	179
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	1e-25
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	4e-20
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	4e-18
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	8e-17
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	1e-14
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	2e-11
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	3e-11
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	3e-10
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	3e-09
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	4e-09
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	5e-09
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	7e-09
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	1e-08
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	1e-08
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	1e-08
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	2e-08
2kkh_A	95	Putative heavy metal transporter; zinc transport,	2e-08
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	2e-08
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	9e-08
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	1e-07
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	2e-07
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	3e-07
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	4e-07
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	3e-06
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	4e-07
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	6e-07
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	8e-06
2kyz_A	67	Heavy metal binding protein; structural genomics,	7e-07
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	7e-07
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	1e-06
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	2e-06
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	3e-06
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	3e-06
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	4e-06
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	6e-06
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	1e-05
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	9e-06
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	2e-05
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	3e-05
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	5e-05

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 93.4 bits (232), Expect = 1e-25
 Identities = 20/77 (25%), Positives = 34/77 (44%)

Query: 40  KGRPLSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLK 99
            G   +L T+E  V+M C  C   V+ ++  + GV  VEV LE + V     +   +V  
Sbjct: 12  SGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQA 71

Query: 100 AVRRAGKRAEFWPYPNP 116
            +   G++A      + 
Sbjct: 72  LLEGTGRQAVLKGMGSG 88

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 78.2 bits (193), Expect = 4e-20
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 46  LQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAG 105
           +   E  V M C GC   V   + KL GV   +++L  +KV        + +L  +++ G
Sbjct: 1   MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTG 59

Query: 106 KRAEFW 111
           K   + 
Sbjct: 60  KTVSYL 65

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 73.6 bits (181), Expect = 4e-18
 Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 45  SLQTVELKVRMCCTGCERVVKNAIYKL-RGVDSVEVELELEKVTAVGYVDRNKVLKAVRR 103
            ++  +  V M C+GC   V   + KL   V  +++ LE + V     +  + +L+ +++
Sbjct: 3   EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 62

Query: 104 AGKRA 108
            GK  
Sbjct: 63  TGKEV 67

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 73.9 bits (181), Expect = 8e-17
 Identities = 15/83 (18%), Positives = 33/83 (39%)

Query: 49  VELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRA 108
               + M C  C   +K  +  + G++S+  ++E + ++    V  + ++  +R  GK A
Sbjct: 8   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 67

Query: 109 EFWPYPNPPLYFTSANNYFKDTT 131
                  P     +    F+  T
Sbjct: 68  IIRGAGKPNSSAVAILETFQKYT 90

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 68.6 bits (167), Expect = 1e-14
 Identities = 15/83 (18%), Positives = 33/83 (39%)

Query: 49  VELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRA 108
               + M C  C   +K  +  + G++S+  ++E + ++    V  + ++  +R  GK A
Sbjct: 9   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 68

Query: 109 EFWPYPNPPLYFTSANNYFKDTT 131
                  P     +    F+  T
Sbjct: 69  IIRGAGKPNSSAVAILETFQKYT 91

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 55.7 bits (135), Expect = 2e-11
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 49  VELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKR 107
           ++LKV  M C  C   V  A+ K+ GV+ VEV LE  +    G  D   +++AV   G +
Sbjct: 2   LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYK 61

Query: 108 AE 109
           AE
Sbjct: 62  AE 63

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 56.0 bits (135), Expect = 3e-11
 Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAG 105
             +   V  M C  C  V+K AI K     +V  +     V   G  D   + + +  AG
Sbjct: 22  AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAG 81

Query: 106 KRAE 109
              E
Sbjct: 82  YTPE 85

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 52.7 bits (127), Expect = 3e-10
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 48  TVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGK 106
           T++L V  + C  C   V  A+       +V+V+L  +KVT    +   ++  A+  AG 
Sbjct: 2   TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGY 61

Query: 107 RAE 109
             E
Sbjct: 62  EVE 64

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 50.1 bits (120), Expect = 3e-09
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEK--VTAVGYVDRNKVLKAVRR 103
           QT+ L++  M C  C   ++ AI K+ GV S +V   LE+  V+  G      +  AV R
Sbjct: 3   QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVER 62

Query: 104 AGKRAE 109
           AG  A 
Sbjct: 63  AGYHAR 68

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69

 Score = 50.0 bits (120), Expect = 4e-09
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 49  VELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEK--VTAVGYVDRNKVLKAVRRAG 105
             LK+  M C  C   VK A+ K+ GV S  V        +  V     + +  AV   G
Sbjct: 2   THLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLG 61

Query: 106 KRAE 109
            +A 
Sbjct: 62  YKAT 65

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 49.6 bits (119), Expect = 5e-09
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 6/66 (9%)

Query: 45  SLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLK 99
           + QTV L V  M C+ C   VK AI K+ GV  V+V  E  +   V +        K+ K
Sbjct: 1   ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAV-VTFDDAKTSVQKLTK 59

Query: 100 AVRRAG 105
           A   AG
Sbjct: 60  ATADAG 65

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 49.2 bits (118), Expect = 7e-09
 Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 45  SLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLK 99
           +++ + L+V  M C  C   +++++ +L GV+ V+V+L    V  V      V    ++ 
Sbjct: 3   AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVE-VTIDSSVVTLKDIVA 61

Query: 100 AVRRAGKRAE 109
            +   G   +
Sbjct: 62  VIEDQGYDVQ 71

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73

 Score = 48.9 bits (117), Expect = 1e-08
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 45  SLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRR 103
           S++ + L++  + C  C   VK A+ +  G    +V+L    V      D +K +KAV  
Sbjct: 3   SVEKIVLELSGLSCHHCVARVKKALEEA-GAKVEKVDLNEAVVA-GNKEDVDKYIKAVEA 60

Query: 104 AGKRAE 109
           AG +A+
Sbjct: 61  AGYQAK 66

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 48.4 bits (116), Expect = 1e-08
 Identities = 11/61 (18%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 48  TVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEK--VTAVGYVDRNKVLKAVRRA 104
               +V  + C  C   ++  + ++ GV  ++V +E +   V       ++ + +A+  A
Sbjct: 2   KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDA 61

Query: 105 G 105
           G
Sbjct: 62  G 62

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 48.4 bits (116), Expect = 1e-08
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%)

Query: 46  LQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLKA 100
           ++   L+V  M C  C + V+ ++ +L GV +V V LE  KV  V +    V    +  A
Sbjct: 1   MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVD-VSFDADKVSVKDIADA 59

Query: 101 VRRAG 105
           +   G
Sbjct: 60  IEDQG 64

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 48.5 bits (116), Expect = 2e-08
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 43  PLSLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKV 97
            + + +V + V  M C  C   ++  I K+ GV  ++V LE +  T + Y         +
Sbjct: 4   SMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNAT-IIYDPKLQTPKTL 62

Query: 98  LKAVRRAG 105
            +A+   G
Sbjct: 63  QEAIDDMG 70

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 48.6 bits (116), Expect = 2e-08
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 6/70 (8%)

Query: 45  SLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLK 99
            LQ     V  +CCT    +++N +  L GV    V +    V  V +    +   ++ K
Sbjct: 14  KLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVI-VVHDSLLISPFQIAK 72

Query: 100 AVRRAGKRAE 109
           A+  A   A 
Sbjct: 73  ALNEARLEAN 82

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 48.1 bits (115), Expect = 2e-08
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 46  LQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLKA 100
           + +V + V  M C  C   ++  I K+ GV  ++V LE +  T + Y         + +A
Sbjct: 1   VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNAT-IIYDPKLQTPKTLQEA 59

Query: 101 VRRAG 105
           +   G
Sbjct: 60  IDDMG 64

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74

 Score = 46.5 bits (111), Expect = 9e-08
 Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 6/65 (9%)

Query: 46  LQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLKA 100
           ++ +++ V  M C  C   V+ A+  + GV    V L   +   V +    V    + + 
Sbjct: 1   MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRAD-VVFDPNLVKEEDIKEE 59

Query: 101 VRRAG 105
           +  AG
Sbjct: 60  IEDAG 64

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84

 Score = 46.2 bits (110), Expect = 1e-07
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 6/66 (9%)

Query: 45  SLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLK 99
               +++KV  M C  C   ++  I KL+GV  ++V L+ ++ T + Y    +   ++ K
Sbjct: 7   GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEAT-IVYQPHLISVEEMKK 65

Query: 100 AVRRAG 105
            +   G
Sbjct: 66  QIEAMG 71

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 6/64 (9%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLKAV 101
           Q   + +  M C  C + ++  I K  GV S+ V L     T V Y         +  A+
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGT-VEYDPLLTSPETLRGAI 61

Query: 102 RRAG 105
              G
Sbjct: 62  EDMG 65

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71

 Score = 44.6 bits (106), Expect = 3e-07
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 6/65 (9%)

Query: 46  LQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLKA 100
           L+T +++V  M C  C   ++ A+ +L+GV    V +   ++T V Y    V    + + 
Sbjct: 2   LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLT-VTYDPKQVSEITIQER 60

Query: 101 VRRAG 105
           +   G
Sbjct: 61  IAALG 65

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 46.6 bits (111), Expect = 4e-07
 Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 6/64 (9%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLKAV 101
           + + ++V  M C  C   ++  + ++ GV    V L  E V  V Y         + + +
Sbjct: 6   KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVN-VIYDPAETGTAAIQEKI 64

Query: 102 RRAG 105
            + G
Sbjct: 65  EKLG 68

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 6/74 (8%)

Query: 41  GRPLSLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRN 95
           G  +  +  E  +  M C  C   ++  + K+ GV +  V   LE VT V Y       +
Sbjct: 68  GYHVVTEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVT-VEYNPKEASVS 126

Query: 96  KVLKAVRRAGKRAE 109
            + +AV + G + +
Sbjct: 127 DLKEAVDKLGYKLK 140

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68

 Score = 44.2 bits (105), Expect = 4e-07
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 6/66 (9%)

Query: 49  VELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLKAVRR 103
            E  V+ M C  C   ++ A+ ++ GV  V+V+L+ EK   V +    V   ++ +A+  
Sbjct: 2   QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAV-VKFDEANVQATEICQAINE 60

Query: 104 AGKRAE 109
            G +AE
Sbjct: 61  LGYQAE 66

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 45.8 bits (109), Expect = 6e-07
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 6/66 (9%)

Query: 45  SLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLK 99
           + Q   L+++ M C  C   ++  + K  GV SV V L   K   + Y    +   ++ +
Sbjct: 2   APQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAE-IKYDPEVIQPLEIAQ 60

Query: 100 AVRRAG 105
            ++  G
Sbjct: 61  FIQDLG 66

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 42.7 bits (101), Expect = 8e-06
 Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 4/75 (5%)

Query: 39  PKGRPLSLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV---GYVDR 94
            +    S   +EL +  M C  C   +++ + +  G+    V L   K         +  
Sbjct: 72  MEDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGP 131

Query: 95  NKVLKAVRRAGKRAE 109
             ++K +   G  A 
Sbjct: 132 RDIIKIIEEIGFHAS 146

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67

 Score = 44.0 bits (104), Expect = 7e-07
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 48  TVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAG 105
              L V  + C  C+  +  A+ +L GV + EV +E +KV  V   + + VLK +    
Sbjct: 2   RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVV-VETENLDSVLKKLEEID 58

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90

 Score = 44.4 bits (105), Expect = 7e-07
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 6/66 (9%)

Query: 45  SLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLK 99
           +  T    +  M C  C   +++ +  L+ V S+ V LE      V Y    V    + K
Sbjct: 1   NDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAI-VVYNASSVTPESLRK 59

Query: 100 AVRRAG 105
           A+    
Sbjct: 60  AIEAVS 65

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEK--VTAVGYVDRNKVLKAVRR 103
           + V L V  M C+ C   +   +  L+GV   ++ L   +  VT    V  + + + +  
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61

Query: 104 AGKRAE 109
            G   E
Sbjct: 62  CGFDCE 67

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 42.4 bits (100), Expect = 3e-06
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAG 105
           +    +V  + CT C    +  + ++ GV    V     K+T  G     +V +A     
Sbjct: 3   EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQVEQAGAFEH 62

Query: 106 KRAE 109
            +  
Sbjct: 63  LKII 66

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73

 Score = 42.0 bits (99), Expect = 3e-06
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 45  SLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVD--RNKVLKAV 101
           S      KV  M C  C R V+NA+ +L GV+ V+V    EK+  V   +  R +V  A+
Sbjct: 1   SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLV-VDADNDIRAQVESAL 59

Query: 102 RRAG 105
           ++AG
Sbjct: 60  QKAG 63

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77

 Score = 41.9 bits (99), Expect = 4e-06
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 45  SLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLK 99
           +     ++V  M C  C   ++  + +  G+ S+ V L   K   V Y    +    + +
Sbjct: 1   NSSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAE-VRYNPAVIQPPMIAE 59

Query: 100 AVRRAGKRAE 109
            +R  G  A 
Sbjct: 60  FIRELGFGAT 69

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 43.9 bits (103), Expect = 6e-06
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV---GYVDRNKVLKAVR 102
            T  + +  M C  C   ++  I +L GV  + V L     T +     +   ++  A+ 
Sbjct: 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE 181

Query: 103 RAGKRAE 109
             G  A 
Sbjct: 182 DMGFEAS 188

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 45  SLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVT------AVGYVDRNKV 97
            + T++L++  M C  C   ++  I +L GV S++V LE +             V   + 
Sbjct: 18  HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRA 77

Query: 98  LKAVRRAGKRAEFWPYPNPP 117
           ++A+     +          
Sbjct: 78  IEALPPGNFKVSLPDGAEGS 97

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76

 Score = 41.2 bits (97), Expect = 9e-06
 Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 6/64 (9%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLKAV 101
           + + ++V  M C  C   ++  + ++ GV    V L  E V  V Y         + + +
Sbjct: 6   KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVN-VIYDPAETGTAAIQEKI 64

Query: 102 RRAG 105
            + G
Sbjct: 65  EKLG 68

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV---GYVDRNKVLKAVR 102
               ++V  M C  C + ++ A+  L GV+ V V L  E          +D   + + + 
Sbjct: 2   MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE 61

Query: 103 RAGKRAE 109
             G    
Sbjct: 62  DLGYGVV 68

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 44  LSLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVL 98
           +    +EL VR M C  C   +++++ K RG+    V L   K   + Y    +    ++
Sbjct: 1   MGDGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAH-IKYDPEIIGPRDII 59

Query: 99  KAVRRAG 105
             +   G
Sbjct: 60  HTIESLG 66

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80

 Score = 39.2 bits (92), Expect = 5e-05
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 6/64 (9%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY----VDRNKVLKAV 101
           +  E  +  M C  C   ++  + K+ GV +  V   LE VT V Y       + + +AV
Sbjct: 3   EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVT-VEYNPKEASVSDLKEAV 61

Query: 102 RRAG 105
            + G
Sbjct: 62  DKLG 65

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	179
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.57
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.48
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.48
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.44
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.44
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.36
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.29
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.29
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.27
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.27
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.27
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.26
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.25
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.24
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.24
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.24
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.23
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.23
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.22
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.21
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.21
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.21
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.2
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.2
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.18
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.17
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.16
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.15
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.15
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.14
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.1
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.09
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.05
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	99.03
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.98
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.98
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.96
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.91
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.64
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.61
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.5
2raq_A	97	Conserved protein MTH889; alpha-beta protein, stru	85.71
3bpd_A	100	Uncharacterized protein; heptamer, Mg+2 ION, PSI-2	85.57
2x3d_A	96	SSO6206; unknown function; 2.70A {Sulfolobus solfa	83.37

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.57  E-value=1.5e-14  Score=93.61  Aligned_cols=66  Identities=26%  Similarity=0.490  Sum_probs=62.1

Q ss_pred             eEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccC
Q 030348           47 QTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPY  113 (179)
Q Consensus        47 ~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~  113 (179)
                      .+.+|+|||+|.+|+.+|+++|++++|| ++++|+.+++++|.+..++++|.++|+++||++++|++
T Consensus         2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~   67 (68)
T 3iwl_A            2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL   67 (68)
T ss_dssp             CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred             ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence            4567888999999999999999999999 99999999999999989999999999999999998864

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.48  E-value=3.6e-13  Score=86.62  Aligned_cols=65  Identities=35%  Similarity=0.548  Sum_probs=60.3

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEE--ecCCHHHHHHHHHhcCcceEEc
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV--GYVDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~--g~~~~~~i~~~i~~~G~~a~~~  111 (179)
                      ++++|.| ||+|.+|+.+|+++|++++||.++++|+.+++++|.  +..+.++|.++|++.||+++++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   69 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL   69 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence            4678999 999999999999999999999999999999999998  4489999999999999998764

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.48  E-value=3.1e-13  Score=88.22  Aligned_cols=68  Identities=24%  Similarity=0.399  Sum_probs=62.2

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccC
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPY  113 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~  113 (179)
                      +++++|.| ||+|.+|+.+|+++|++++||.++++|+..++++|..+   ++.+.|.++|+++||+++++..
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE   72 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence            35778999 99999999999999999999999999999999999854   6899999999999999988753

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.44  E-value=6.3e-13  Score=86.94  Aligned_cols=66  Identities=27%  Similarity=0.410  Sum_probs=61.9

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccC
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPY  113 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~  113 (179)
                      +++.+|.| ||+|.+|+.+|+++|++ +||..+++|+..++++|..+ +.+.|.++|+++||.+++++.
T Consensus         4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~   70 (73)
T 3fry_A            4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS   70 (73)
T ss_dssp             CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred             cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence            56788999 99999999999999999 99999999999999999988 999999999999999988763

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.44  E-value=1.1e-12  Score=85.56  Aligned_cols=67  Identities=22%  Similarity=0.463  Sum_probs=62.4

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHHcCC-CeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEcc
Q 030348           46 LQTVELKVRMCCTGCERVVKNAIYKLR-GVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        46 ~~~v~l~Vgm~C~~C~~kI~~al~~~~-GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      +.+.+|+|.|+|.+|+.+|+++|++++ ||.++++|+..++++|.+..+.+.|.++|+++||++.+|.
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   71 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK   71 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence            456778889999999999999999999 9999999999999999988899999999999999998875

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.36  E-value=7.7e-12  Score=86.87  Aligned_cols=73  Identities=26%  Similarity=0.372  Sum_probs=66.6

Q ss_pred             CcceEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccCCCC
Q 030348           44 LSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNP  116 (179)
Q Consensus        44 ~~~~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~~~~  116 (179)
                      +...+++|+|.|+|.+|+.+|+++|.+++||.++++|+..++++|.+.++.+.|.++|+++||++.++....+
T Consensus        16 ~~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~~   88 (98)
T 2crl_A           16 GTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSG   88 (98)
T ss_dssp             CCCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCCC
T ss_pred             ccceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCCC
Confidence            4456778888999999999999999999999999999999999999888999999999999999999876554

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.29  E-value=7.5e-12  Score=78.08  Aligned_cols=60  Identities=25%  Similarity=0.458  Sum_probs=56.4

Q ss_pred             EEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcce
Q 030348           49 VELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRA  108 (179)
Q Consensus        49 v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a  108 (179)
                      ..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.+..+.+.|.++|+++||.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~   63 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV   63 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            46899 9999999999999999999999999999999999997788999999999999975

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.29  E-value=7.4e-12  Score=79.41  Aligned_cols=62  Identities=37%  Similarity=0.561  Sum_probs=57.2

Q ss_pred             EEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEc
Q 030348           50 ELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        50 ~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~  111 (179)
                      .|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.+..+.+.|.++|+++||.+..+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~   65 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL   65 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence            5889 9999999999999999999999999999999999965588999999999999988654

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.27  E-value=3.8e-11  Score=76.65  Aligned_cols=66  Identities=35%  Similarity=0.439  Sum_probs=59.0

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~  111 (179)
                      .++..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+   .+.+.|.+.|++.||.+.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1osd_A            2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence            34678999 99999999999999999999999999999999999754   57889999999999987653

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.27  E-value=4.7e-11  Score=75.89  Aligned_cols=65  Identities=32%  Similarity=0.493  Sum_probs=57.7

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEc
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~  111 (179)
                      ++..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+  .+.+.|.++|++.||.+.++
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~   70 (71)
T 2xmw_A            3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL   70 (71)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred             cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence            3567999 99999999999999999999999999999999999854  67888999999999987653

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.27  E-value=4.8e-11  Score=76.09  Aligned_cols=63  Identities=22%  Similarity=0.445  Sum_probs=57.4

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcce
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRA  108 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a  108 (179)
                      +.+..|+| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+   ++.+.|.+.|+++||.+
T Consensus         4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   70 (71)
T 2l3m_A            4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV   70 (71)
T ss_dssp             EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            45778999 99999999999999999999999999999999999743   67889999999999975

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.26  E-value=1e-11  Score=84.06  Aligned_cols=65  Identities=23%  Similarity=0.312  Sum_probs=58.7

Q ss_pred             CcceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcce
Q 030348           44 LSLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRA  108 (179)
Q Consensus        44 ~~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a  108 (179)
                      ..+.+..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|...++.+.|.++|+++||.+
T Consensus        19 ~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           19 FQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             ---CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred             ccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            3456778999 9999999999999999999999999999999999998889999999999999975

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.25  E-value=7.9e-11  Score=75.93  Aligned_cols=66  Identities=32%  Similarity=0.370  Sum_probs=58.3

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecC-CHHHHHHHHHhcCcceEEc
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYV-DRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~-~~~~i~~~i~~~G~~a~~~  111 (179)
                      +.+..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+. ..+.|.+.|+++||.+...
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~   69 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence            45678999 999999999999999999999999999999999998652 3678899999999987653

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.24  E-value=5.1e-11  Score=79.40  Aligned_cols=70  Identities=26%  Similarity=0.398  Sum_probs=62.3

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccCCC
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPYPN  115 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~~~  115 (179)
                      ..++.|+| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+   ++.+.|.+.|+++||.+.++..+.
T Consensus         8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~   81 (84)
T 1q8l_A            8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQPK   81 (84)
T ss_dssp             CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCTT
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCCcc
Confidence            45678999 99999999999999999999999999999999999864   578899999999999987766443

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.24  E-value=8.7e-11  Score=75.90  Aligned_cols=65  Identities=25%  Similarity=0.382  Sum_probs=58.9

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEcc
Q 030348           48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      ++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+   .+.+.|.+.|+++||.+.+..
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (75)
T 3cjk_B            3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   71 (75)
T ss_dssp             EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence            567999 99999999999999999999999999999999999854   578899999999999887653

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.24  E-value=4.5e-11  Score=76.34  Aligned_cols=64  Identities=22%  Similarity=0.301  Sum_probs=58.3

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348           48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~  111 (179)
                      +..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+   ++.+.|.+.|+++||.+.+.
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1aw0_A            4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence            567999 99999999999999999999999999999999999864   57889999999999987654

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.23  E-value=5.3e-11  Score=80.88  Aligned_cols=69  Identities=22%  Similarity=0.257  Sum_probs=60.2

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhc---CcceEEccCCC
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRA---GKRAEFWPYPN  115 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~---G~~a~~~~~~~  115 (179)
                      .++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+   ++.+.|.++|+++   ||++.++....
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~~   78 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEVE   78 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC-
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCCc
Confidence            3567999 99999999999999999999999999999999999853   5788999999999   59887776543

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.23  E-value=7.9e-11  Score=76.96  Aligned_cols=68  Identities=24%  Similarity=0.380  Sum_probs=60.9

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEcc
Q 030348           45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      ...+..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+   .+.+.|.++|+++||.+.+.+
T Consensus         6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   77 (79)
T 1kvi_A            6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   77 (79)
T ss_dssp             TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence            356778999 99999999999999999999999999999999999854   578899999999999987654

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.22  E-value=7.5e-11  Score=74.30  Aligned_cols=62  Identities=29%  Similarity=0.467  Sum_probs=56.7

Q ss_pred             EEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348           50 ELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        50 ~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~  111 (179)
                      .|.| ||+|.+|..+|+++|.+++||.++++|+..++++|..+   .+.+.|.+.+++.||+++++
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   68 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcccC
Confidence            5889 99999999999999999999999999999999999854   57889999999999988753

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.21  E-value=1.3e-10  Score=72.70  Aligned_cols=62  Identities=29%  Similarity=0.448  Sum_probs=56.0

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcce
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRA  108 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a  108 (179)
                      .+..|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..+   .+.+.|.+.|++.||.+
T Consensus         2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            3567999 99999999999999999999999999999999999754   57889999999999965

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.21  E-value=9e-11  Score=74.87  Aligned_cols=65  Identities=20%  Similarity=0.391  Sum_probs=59.2

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEcc
Q 030348           48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      +..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+  .+.+.|.++|++.||.+.++.
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~   70 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence            457999 99999999999999999999999999999999999854  678899999999999998774

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.21  E-value=4.2e-11  Score=78.02  Aligned_cols=67  Identities=18%  Similarity=0.253  Sum_probs=60.5

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEcc
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      ++++.|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+   ++.+.|.++|+++||.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   72 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE   72 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence            45678999 99999999999999999999999999999999999854   578899999999999987764

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.20  E-value=1.3e-10  Score=74.62  Aligned_cols=66  Identities=17%  Similarity=0.379  Sum_probs=59.4

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~  111 (179)
                      +.+..|+| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..+   .+.+.|.+.|+++||.+.++
T Consensus         5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   74 (76)
T 1opz_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE   74 (76)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence            45678999 99999999999999999999999999999999999753   57889999999999987654

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.20  E-value=1.1e-10  Score=74.11  Aligned_cols=62  Identities=27%  Similarity=0.350  Sum_probs=56.4

Q ss_pred             EEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEc
Q 030348           50 ELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        50 ~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~  111 (179)
                      .|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+  .+.+.|.++|+++||.+.+.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   67 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA   67 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence            4889 99999999999999999999999999999999998754  57889999999999987654

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.18  E-value=9e-11  Score=75.47  Aligned_cols=65  Identities=20%  Similarity=0.349  Sum_probs=57.7

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~  111 (179)
                      .+..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+   ++.+.|.++|+++||.+.+.
T Consensus         4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   72 (75)
T 1yjr_A            4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV   72 (75)
T ss_dssp             CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence            3467999 99999999999999999999999999999999999864   45678999999999987654

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.17  E-value=3.5e-10  Score=77.19  Aligned_cols=73  Identities=23%  Similarity=0.297  Sum_probs=64.4

Q ss_pred             CcceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccCCCC
Q 030348           44 LSLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPYPNP  116 (179)
Q Consensus        44 ~~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~~~~  116 (179)
                      ..+.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.+.|.++|+++||.+.++..+..
T Consensus        13 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~   89 (95)
T 2kkh_A           13 KKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNGET   89 (95)
T ss_dssp             SCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCCCC
T ss_pred             cceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCCCc
Confidence            3466788999 99999999999999999999999999999999999854   5788999999999999988766553

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.16  E-value=1.2e-10  Score=72.97  Aligned_cols=61  Identities=18%  Similarity=0.358  Sum_probs=55.2

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcce
Q 030348           48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRA  108 (179)
Q Consensus        48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a  108 (179)
                      +..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+  .+.+.|.++|++.||.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~   65 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV   65 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence            356899 99999999999999999999999999999999999854  57889999999999864

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.15  E-value=1.3e-10  Score=73.43  Aligned_cols=64  Identities=22%  Similarity=0.404  Sum_probs=57.1

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceE
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAE  109 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~  109 (179)
                      +.+..|+| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+   .+.+.+.+.++++||.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   69 (71)
T 2ldi_A            2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA   69 (71)
T ss_dssp             CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence            34567999 99999999999999999999999999999999999753   577889999999999764

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.15  E-value=2.2e-10  Score=74.67  Aligned_cols=67  Identities=22%  Similarity=0.403  Sum_probs=59.9

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccC
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPY  113 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~  113 (179)
                      .+..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+   .+.+.|.+.|+++||.+.++..
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~   73 (80)
T 1jww_A            3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE   73 (80)
T ss_dssp             EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCS
T ss_pred             eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCc
Confidence            4567999 99999999999999999999999999999999999753   5788999999999999887653

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.14  E-value=8.6e-11  Score=74.71  Aligned_cols=60  Identities=28%  Similarity=0.359  Sum_probs=54.5

Q ss_pred             EEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEE
Q 030348           49 VELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEF  110 (179)
Q Consensus        49 v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~  110 (179)
                      ..|.| ||+|.+|+.+|+++|.++ ||.++++|+..++++|..+.+ +.|.++|+++||++..
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~   63 (67)
T 2kyz_A            3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVES   63 (67)
T ss_dssp             EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCB
T ss_pred             EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceee
Confidence            56999 999999999999999999 999999999999999987655 8899999999997643

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.10  E-value=3.5e-10  Score=82.41  Aligned_cols=65  Identities=18%  Similarity=0.362  Sum_probs=59.4

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~  111 (179)
                      .++.|+| ||+|.+|+.+|+++|++++||.++++|+..++++|..+   ++.+.|.++|+++||++.++
T Consensus        80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  148 (149)
T 2ew9_A           80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA  148 (149)
T ss_dssp             SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred             ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence            4678999 99999999999999999999999999999999999854   57899999999999988654

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.05  E-value=6.9e-10  Score=81.22  Aligned_cols=66  Identities=23%  Similarity=0.423  Sum_probs=60.4

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEcc
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      .++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+   ++.+.|.++|+++||++.++.
T Consensus        74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  143 (151)
T 1p6t_A           74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG  143 (151)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred             cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcC
Confidence            4678999 99999999999999999999999999999999999854   689999999999999987754

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.03  E-value=1.2e-09  Score=86.69  Aligned_cols=70  Identities=19%  Similarity=0.401  Sum_probs=64.1

Q ss_pred             eEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccCCCC
Q 030348           47 QTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNP  116 (179)
Q Consensus        47 ~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~~~~  116 (179)
                      .+++|+|.|+|.+|+.+|+++|++++||.++++|+..++++|.+.+++++|.++|+++||++.++....+
T Consensus         6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~   75 (222)
T 1qup_A            6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP   75 (222)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred             eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence            3556888899999999999999999999999999999999999888999999999999999998876654

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.98  E-value=9.2e-10  Score=70.52  Aligned_cols=58  Identities=22%  Similarity=0.445  Sum_probs=50.6

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceE
Q 030348           48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAE  109 (179)
Q Consensus        48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~  109 (179)
                      +..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.+..+    .+.|+++||.+.
T Consensus         4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~   62 (71)
T 2aj0_A            4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEH   62 (71)
T ss_dssp             EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTT
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCcc
Confidence            567999 9999999999999999999999999999999999987654    456778888643

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.98  E-value=2.5e-09  Score=82.65  Aligned_cols=68  Identities=21%  Similarity=0.346  Sum_probs=60.2

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccCC
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPYP  114 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~~  114 (179)
                      .++.|+| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+   ++.+.|.++|+++||.+.++...
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~  193 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSES  193 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC---
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCCC
Confidence            5678999 99999999999999999999999999999999999854   57899999999999999887543

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.96  E-value=3.2e-09  Score=77.22  Aligned_cols=68  Identities=22%  Similarity=0.248  Sum_probs=60.7

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEcc
Q 030348           45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      .++++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   .+.+.+.+.|++.||.+.+..
T Consensus         2 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   73 (149)
T 2ew9_A            2 APQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME   73 (149)
T ss_dssp             CCEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred             CcEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence            366788999 99999999999999999999999999999999998753   578899999999999887653

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.91  E-value=4.6e-09  Score=84.71  Aligned_cols=70  Identities=19%  Similarity=0.401  Sum_probs=63.4

Q ss_pred             eEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccCCCC
Q 030348           47 QTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNP  116 (179)
Q Consensus        47 ~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~~~~  116 (179)
                      .+++|+|.|+|.+|+.+|+++|++++||.++++|+..++++|.+..++++|.++|+++||++.++....+
T Consensus         7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~   76 (249)
T 1jk9_B            7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP   76 (249)
T ss_dssp             EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred             eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence            3456888899999999999999999999999999999999999888999999999999999988766554

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.64  E-value=7.7e-08  Score=74.15  Aligned_cols=65  Identities=22%  Similarity=0.332  Sum_probs=55.9

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcC---cceE
Q 030348           45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAG---KRAE  109 (179)
Q Consensus        45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G---~~a~  109 (179)
                      .+.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+   ++.+.|.++|++.|   |.+.
T Consensus        18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~   89 (202)
T 2rop_A           18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVS   89 (202)
T ss_dssp             --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEE
T ss_pred             ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEE
Confidence            356778999 99999999999999999999999999999999999754   67889999999883   6554

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.61  E-value=2e-07  Score=67.88  Aligned_cols=63  Identities=17%  Similarity=0.424  Sum_probs=55.6

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcce
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRA  108 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a  108 (179)
                      ..+..|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+   .+...+.+.+++.||.+
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   71 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence            34567999 99999999999999999999999999999999988743   57888999999999864

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.50  E-value=2.9e-07  Score=84.15  Aligned_cols=63  Identities=22%  Similarity=0.331  Sum_probs=57.7

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEE
Q 030348           48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEF  110 (179)
Q Consensus        48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~  110 (179)
                      +++++| ||+|.+|+.+|+++|++++||.++++|+.+++++|..+   .+.+++.+++++.||++..
T Consensus         3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~   69 (723)
T 3j09_A            3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVD   69 (723)
T ss_dssp             CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESS
T ss_pred             eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccc
Confidence            357999 99999999999999999999999999999999999854   6899999999999998753

>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1

Probab=85.71  E-value=6.4  Score=26.61  Aligned_cols=67  Identities=21%  Similarity=0.275  Sum_probs=46.7

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEE-----eCCccEE--EEEec-CCHHHHHHHHHhcCcceEEcc
Q 030348           45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEV-----ELELEKV--TAVGY-VDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~v-----d~~~~~v--~V~g~-~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      ..+++.|.| .-+-+. .-.+-+.|.+++||..|++     |..+..+  +|.|. ++.++|.++|++.|.-..-+.
T Consensus         5 ~irRlVLDVlKPh~p~-i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSID   80 (97)
T 2raq_A            5 GLIRIVLDILKPHEPI-IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSVD   80 (97)
T ss_dssp             SEEEEEEEEECCSCSC-HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEEE
T ss_pred             CceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence            456777777 443333 3466777889999887764     4444444  55676 999999999999998765443

>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1

Probab=85.57  E-value=2.4  Score=28.82  Aligned_cols=67  Identities=19%  Similarity=0.236  Sum_probs=46.8

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEe-----CCccEE--EEEec-CCHHHHHHHHHhcCcceEEcc
Q 030348           45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVE-----LELEKV--TAVGY-VDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd-----~~~~~v--~V~g~-~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      ..+++.|.| ..+-+ -.-.+-+.|.+++||..|++.     ..+..+  +|+|. ++.++|.++|++.|.-+.-+.
T Consensus         5 ~iRRlVLDVlKPh~P-~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSID   80 (100)
T 3bpd_A            5 GLRRLVLDVLKPHEP-KTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSVD   80 (100)
T ss_dssp             SEEEEEEEEEEESCS-CHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEEE
T ss_pred             cceEEEEEecCCCCC-CHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence            356777777 44333 344667789999999887754     344433  45676 999999999999998766543

>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}

Probab=83.37  E-value=5.3  Score=26.94  Aligned_cols=66  Identities=20%  Similarity=0.282  Sum_probs=45.9

Q ss_pred             cceEEEEEE-c-CcChhHHHHHHHHHHcCCCeeEEEEe-----CCccE--EEEEec-CCHHHHHHHHHhcCcceEEc
Q 030348           45 SLQTVELKV-R-MCCTGCERVVKNAIYKLRGVDSVEVE-----LELEK--VTAVGY-VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        45 ~~~~v~l~V-g-m~C~~C~~kI~~al~~~~GV~~v~vd-----~~~~~--v~V~g~-~~~~~i~~~i~~~G~~a~~~  111 (179)
                      ..+++.|.| . ++-+.- -.+-+.|.+++||..|++.     ..+..  ++|+|. ++.++|.++|++.|.-..-+
T Consensus         3 ~irRlVLDVlKP~h~P~i-vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSI   78 (96)
T 2x3d_A            3 AIRRLVLDVLKPIRGTSI-VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSI   78 (96)
T ss_dssp             CEEEEEEEEEEESSSSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEE
T ss_pred             ceEEEEEEcccCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence            455667777 3 344433 3567788999999887754     34443  355676 99999999999999866544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	179
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	6e-16
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-14
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	2e-14
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	4e-13
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	6e-12
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	9e-12
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	1e-11
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	1e-11
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	5e-11
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	9e-11
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	9e-11
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	3e-10
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	3e-10
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	1e-09

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.7 bits (163), Expect = 6e-16
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 46  LQTVELKVRMCCTGCERVVKNAIYKL-RGVDSVEVELELEKVTAVGYVDRNKVLKAVRRA 104
           ++  +  V M C+GC   V   + KL   V  +++ LE + V     +  + +L+ +++ 
Sbjct: 3   IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKT 62

Query: 105 GKRA 108
           GK  
Sbjct: 63  GKEV 66

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 62.9 bits (153), Expect = 1e-14
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 49  VELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRA 108
            E  V M C GC   V   + KL G    +++L  +KV        + +L  +++ GK  
Sbjct: 3   HEFSVDMTCGGCAEAVSRVLNKLGG-VKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTV 61

Query: 109 EFW 111
            + 
Sbjct: 62  SYL 64

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.9 bits (153), Expect = 2e-14
 Identities = 12/64 (18%), Positives = 28/64 (43%)

Query: 48  TVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKR 107
                + M C  C   +K  +  + G++S+  ++E + ++    V  + ++  +R  GK 
Sbjct: 7   EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKD 66

Query: 108 AEFW 111
           A   
Sbjct: 67  AIIR 70

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 59.4 bits (144), Expect = 4e-13
 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV---GYVDRNKVLKAVR 102
           QTV L V  M C+ C   VK AI K+ GV  V+V  E  +             K+ KA  
Sbjct: 3   QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62

Query: 103 RAGKRAE 109
            AG  + 
Sbjct: 63  DAGYPSS 69

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (136), Expect = 6e-12
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 42  RPLSLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV---GYVDRNKV 97
             + + +V + V  M C  C   ++  I K+ GV  ++V LE +  T +          +
Sbjct: 3   PSMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTL 62

Query: 98  LKAVRRAGKRAE 109
            +A+   G  A 
Sbjct: 63  QEAIDDMGFDAV 74

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 55.7 bits (134), Expect = 9e-12
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 48  TVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGK 106
           T++L V  + C  C   V  A+       +V+V+L  +KVT    +   ++  A+  AG 
Sbjct: 2   TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGH 61

Query: 107 RAE 109
             E
Sbjct: 62  EVE 64

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.5 bits (134), Expect = 1e-11
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 3/66 (4%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV--GYVDRNKVLKAVRR 103
           + V L V  M C+ C   +   +  L+GV   ++ L   +        V  + + + +  
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61

Query: 104 AGKRAE 109
            G   E
Sbjct: 62  CGFDCE 67

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 56.0 bits (135), Expect = 1e-11
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV---GYVDRNKVLKAVR 102
           +  E  +  M C  C   ++  + K+ GV +  V   LE VT          + + +AV 
Sbjct: 2   EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 61

Query: 103 RAGKRAE 109
           + G + +
Sbjct: 62  KLGYKLK 68

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 53.6 bits (129), Expect = 5e-11
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 50  ELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV---GYVDRNKVLKAVRRAG 105
           E  V+ M C  C   ++ A+ ++ GV  V+V+L+ EK         V   ++ +A+   G
Sbjct: 3   EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELG 62

Query: 106 KRAE 109
            +AE
Sbjct: 63  YQAE 66

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 53.2 bits (128), Expect = 9e-11
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV---GYVDRNKVLKAVR 102
           + + ++V  M C  C   ++  + ++ GV    V L  E V  +          + + + 
Sbjct: 6   KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65

Query: 103 RAG 105
           + G
Sbjct: 66  KLG 68

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (128), Expect = 9e-11
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVR 102
             +++KV  M C  C   ++  I KL+GV  ++V L+ ++ T V     +   ++ K + 
Sbjct: 9   VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE 68

Query: 103 RAGKRAEFWPYPNP 116
             G  A     P  
Sbjct: 69  AMGFPAFVKKQPKY 82

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (124), Expect = 3e-10
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 4/67 (5%)

Query: 47  QTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV---GYVDRNKVLKAVR 102
           Q   + +  M C  C + ++  I K  GV S+ V L     T            +  A+ 
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

Query: 103 RAGKRAE 109
             G  A 
Sbjct: 63  DMGFDAT 69

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 51.7 bits (124), Expect = 3e-10
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 45  SLQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVD-RNKVLKAVR 102
           S      KV  M C  C R V+NA+ +L GV+ V+V    EK+      D R +V  A++
Sbjct: 1   SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ 60

Query: 103 RAGKRAE 109
           +AG    
Sbjct: 61  KAGYSLR 67

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 50.2 bits (120), Expect = 1e-09
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 46  LQTVELKVR-MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV---GYVDRNKVLKAV 101
           ++   L+V  M C  C + V+ ++ +L GV +V V LE  KV        V    +  A+
Sbjct: 1   MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAI 60

Query: 102 RRAG 105
              G
Sbjct: 61  EDQG 64

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	179
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.68
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.65
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.64
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.6
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.59
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.58
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.58
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.56
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.56
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.56
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.54
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.51
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.5
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.49
d2raqa1	93	Uncharacterized protein MTH889 {Methanobacterium t	87.67
d3bpda1	91	Uncharacterized protein AF1549 {Archaeoglobus fulg	83.85

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.68  E-value=1.1e-16  Score=102.73  Aligned_cols=64  Identities=27%  Similarity=0.507  Sum_probs=61.1

Q ss_pred             EEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEcc
Q 030348           48 TVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        48 ~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      +.+|+|+|+|.+|+++|+++|++++|+ ++++|+.+++++|.++++++.|+++|+++||+++++.
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEee
Confidence            568999999999999999999999998 6999999999999999999999999999999999874

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.65  E-value=3.4e-16  Score=102.12  Aligned_cols=65  Identities=18%  Similarity=0.417  Sum_probs=62.2

Q ss_pred             EEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEcc
Q 030348           48 TVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        48 ~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      +.+|+|+|+|++|+++|+++|++++||.++++|+.+++++|++.+++++|+++|+++||++.++.
T Consensus         7 ~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~g   71 (72)
T d1qupa2           7 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG   71 (72)
T ss_dssp             EEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEEC
T ss_pred             EEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEec
Confidence            56799999999999999999999999999999999999999999999999999999999999874

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.64  E-value=7.6e-16  Score=100.42  Aligned_cols=65  Identities=23%  Similarity=0.516  Sum_probs=61.7

Q ss_pred             cceEEEEEEcCcChhHHHHHHHHHHcCC-CeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceE
Q 030348           45 SLQTVELKVRMCCTGCERVVKNAIYKLR-GVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAE  109 (179)
Q Consensus        45 ~~~~v~l~Vgm~C~~C~~kI~~al~~~~-GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~  109 (179)
                      ++++++|+|+|+|.+|+++|+++|.+++ ||.++++|+.+++++|.+.+++++|+++|+++||++.
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~   67 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVR   67 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEE
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccC
Confidence            4678999999999999999999999995 9999999999999999999999999999999999886

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=1.5e-15  Score=98.88  Aligned_cols=66  Identities=20%  Similarity=0.393  Sum_probs=61.7

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEcc
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFWP  112 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~~  112 (179)
                      +++.|.| ||+|.+|+.+|+++|.+++||.++++|+.+++++|..+  ++.++|.++|+++||+++++.
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEcc
Confidence            4788999 99999999999999999999999999999999999854  899999999999999999875

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.59  E-value=4.3e-15  Score=96.66  Aligned_cols=66  Identities=35%  Similarity=0.439  Sum_probs=61.6

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~  111 (179)
                      .+++.|+| ||+|.+|+.+|+++|++++||.++++|+.++++.|+.+   ++.++|.++|+++||+++++
T Consensus         2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~   71 (72)
T d1osda_           2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEeC
Confidence            36889999 99999999999999999999999999999999999853   78999999999999999875

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.58  E-value=4.6e-15  Score=95.49  Aligned_cols=62  Identities=29%  Similarity=0.467  Sum_probs=58.3

Q ss_pred             EEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348           50 ELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        50 ~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~  111 (179)
                      +|+| ||+|.+|+.+|+++|++++||.++++|+.+++++|+.+   ++.++|.++|+++||+++++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            5899 99999999999999999999999999999999999853   78999999999999999874

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.58  E-value=9.5e-16  Score=97.68  Aligned_cols=62  Identities=27%  Similarity=0.490  Sum_probs=59.2

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceE
Q 030348           48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAE  109 (179)
Q Consensus        48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~  109 (179)
                      +++|+| ||+|++|+.+|+++|++++||.++++|+.+++++|.+.+++++|.++|+++||+++
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence            468999 99999999999999999999999999999999999999999999999999999874

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.5e-14  Score=95.76  Aligned_cols=71  Identities=23%  Similarity=0.364  Sum_probs=65.0

Q ss_pred             CCcceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccC
Q 030348           43 PLSLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPY  113 (179)
Q Consensus        43 ~~~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~  113 (179)
                      ...+.++.|.| ||+|.+|+.+|+++|++++||.++++|+.+++++|..+   ++.++|.++|+++||++.+..+
T Consensus         4 ~~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~~   78 (79)
T d1kvja_           4 SMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP   78 (79)
T ss_dssp             STTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSC
T ss_pred             CCCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCCC
Confidence            35678999999 99999999999999999999999999999999999854   7999999999999999987643

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.56  E-value=1.2e-14  Score=93.74  Aligned_cols=63  Identities=29%  Similarity=0.456  Sum_probs=58.8

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcce
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRA  108 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a  108 (179)
                      +++.+|+| ||+|.+|+.+|+++|++++||.++++|+..++++|..+   ++.++|.+.|+++||++
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            45778999 99999999999999999999999999999999999954   78999999999999986

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=9.3e-15  Score=95.01  Aligned_cols=65  Identities=23%  Similarity=0.310  Sum_probs=60.3

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~  111 (179)
                      ++..|+| ||+|.+|+.+|+++|.+++||.++++|+.+++++|..+   ++.++|.++|+++||++.+.
T Consensus         3 ~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l~   71 (72)
T d2aw0a_           3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             EEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEeC
Confidence            4578999 99999999999999999999999999999999999853   78999999999999999764

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.9e-14  Score=96.36  Aligned_cols=71  Identities=25%  Similarity=0.395  Sum_probs=64.6

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccCCC
Q 030348           45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPYPN  115 (179)
Q Consensus        45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~~~  115 (179)
                      +...+.|+| ||+|.+|+.+|+++|.+++||.++++|+.+++++|..+   ++.+.|.++|+++||++.+...+.
T Consensus         7 ~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~~~k   81 (84)
T d1q8la_           7 GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQPK   81 (84)
T ss_dssp             SCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCTT
T ss_pred             CCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcCCcc
Confidence            456788999 99999999999999999999999999999999999854   789999999999999998876544

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.51  E-value=3.1e-14  Score=94.12  Aligned_cols=69  Identities=22%  Similarity=0.401  Sum_probs=63.2

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccCCC
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPYPN  115 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~~~  115 (179)
                      ++++|.| ||+|.+|+.+|+++|.+++||.++++|+.+++++|+.+   ++.++|.++|+++||++.++....
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~   74 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQD   74 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSSS
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECCccc
Confidence            4678999 99999999999999999999999999999999999853   789999999999999999875544

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.50  E-value=4.7e-14  Score=91.56  Aligned_cols=63  Identities=17%  Similarity=0.424  Sum_probs=58.7

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcce
Q 030348           46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRA  108 (179)
Q Consensus        46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a  108 (179)
                      .++++|+| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+   ++.++|.++|+++||++
T Consensus         5 ~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             ceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            45789999 99999999999999999999999999999999999843   78999999999999975

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=5.3e-14  Score=91.63  Aligned_cols=65  Identities=32%  Similarity=0.395  Sum_probs=58.8

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec-CCHHHHHHHHHhcCcceEEc
Q 030348           47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY-VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~-~~~~~i~~~i~~~G~~a~~~  111 (179)
                      ++++|.| ||+|++|+.+|+++|.+++||.+++||+.+++++|..+ ...++|.++|+++||.++..
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~~~   69 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCCBC
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCcccCC
Confidence            3578999 99999999999999999999999999999999999866 45789999999999987543

>d2raqa1 d.58.61.1 (A:3-95) Uncharacterized protein MTH889 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein MTH889
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.67  E-value=2.2  Score=27.03  Aligned_cols=67  Identities=21%  Similarity=0.285  Sum_probs=48.4

Q ss_pred             CcceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEE-----eCCccEE--EEEec-CCHHHHHHHHHhcCcceEEc
Q 030348           44 LSLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEV-----ELELEKV--TAVGY-VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        44 ~~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~v-----d~~~~~v--~V~g~-~~~~~i~~~i~~~G~~a~~~  111 (179)
                      ++.+++.|.| .-+-+ -.-.+-+.|.+++||..|++     |..+..+  +|.|. ++-++|.+.|++.|.-..-+
T Consensus         2 ~~iRRlVLDVlKPh~P-~i~e~A~~l~~~~gV~~VnitV~EiD~et~~i~itiEG~~idyd~i~~~IE~~Gg~IHSI   77 (93)
T d2raqa1           2 KGLIRIVLDILKPHEP-IIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSV   77 (93)
T ss_dssp             CSEEEEEEEEECCSCS-CHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEE
T ss_pred             CceEEEEEEeecCCCC-CHHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeEEEE
Confidence            4567788888 44444 55577788999999887764     4444444  45576 99999999999999876544

>d3bpda1 d.58.61.1 (A:1-91) Uncharacterized protein AF1549 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein AF1549
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.85  E-value=3.6  Score=25.93  Aligned_cols=66  Identities=20%  Similarity=0.260  Sum_probs=46.3

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEE-----eCCccEE--EEEec-CCHHHHHHHHHhcCcceEEc
Q 030348           45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEV-----ELELEKV--TAVGY-VDRNKVLKAVRRAGKRAEFW  111 (179)
Q Consensus        45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~v-----d~~~~~v--~V~g~-~~~~~i~~~i~~~G~~a~~~  111 (179)
                      ..+++.|.| .-+-+.-. .+-+.|.+++||..+++     |..+..+  +|.|. ++-++|.++|++.|.-..-+
T Consensus         3 ~irRlVLDVlKPh~p~~~-~~A~~l~~~~gV~~VnitV~EiD~~t~~i~ItiEG~~idyd~i~~~IE~~Gg~IHSI   77 (91)
T d3bpda1           3 GLRRLVLDVLKPHEPKTI-VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSV   77 (91)
T ss_dssp             SEEEEEEEEEEESCSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEE
T ss_pred             ceeEEEEEeecCCCCCHH-HHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeEEEE
Confidence            356777777 44444333 47778999999987764     3444443  45576 99999999999999866543