Citrus Sinensis ID: 030357

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MIIMESCSSKQIFQQLNSKKIDSHEDSTFSIDSSLEEDSTNSVSSSMSSSELVEDASSSTSSSCSPSSSSSNGGPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSKSYSPKAKATISKKSSIARGSFLSSLAKSTNQVV
Secondary Structure (PSIPRED)
cEEEEEcccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccHHHHccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cEEEcccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccHHHcHHHHccccccccHcHHHcccHHHHccccccccccHHHHccccHHHcccccccccccccccccccEccccccccccHHHHHcccccccc
Coil and Loop (DISEMBL)
miimescsSKQIFQQLNskkidshedstfsidssleedstnsvsssmssselvedassstssscspsssssnggplyeFSELMAQLPIKrglskfyqgksqsftslASVKNIEDLAKMNIKGSHYYRMKMkscksygggldighsksyspkakatiskkssiargSFLSSLAKSTNQVV
Flexible Loop (DISEMBL)
miimescssKQIFQQLNSKKIDSHEDSTFSIDSSLEEDSTNSVSSSMSSSELVEDASsstssscspsssssNGGPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSKSYSPKAKATiskkssiargsflsslakstnqvv
Low Complexity Region (SEG)
MIIMESCSSKQIFQQLNSKKIDSHEDSTFSIDssleedstnsvsssmssselvedassstssscspsssssNGGPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSKSYspkakatiskkssiaRGSFLSSLAKSTNQVV
Disordered region (IsUnstruct)
******************************************************************************FSELMAQLPIKRGLSKFYQGK*QSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKSYGGGL***************************************
Disordered Region (DISOPRED)
MII****SSK********************************************************************FSELMAQLPIKRGLSKFYQGKSQSFTS*******************************************************************KS*****
Disordered Region (DISEMBL)
MIIMESCSSKQIFQQLNSKK*****************************************************GPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSK*************SSIARGSFLS**********
Disordered Region (DISPRO)
*II**SCSSKQIFQQLNS*******************************************************GPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKSYGGGLD**************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIIMESCSSKQIFQQLNSKKIDSHEDSTFSIDSSLEEDSTNSVSSSMSSSELVEDASSSTSSSCSPSSSSSNGGPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSKSYSPKAKATISKKSSIARGSFLSSLAKSTNQVV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
225445063	184	PREDICTED: uncharacterized protein LOC10	0.810	0.788	0.532	2e-29
297738740	154	unnamed protein product [Vitis vinifera]	0.575	0.668	0.685	2e-28
351724793	181	uncharacterized protein LOC100526906 [Gl	0.642	0.635	0.650	9e-27
255546291	187	conserved hypothetical protein [Ricinus	0.804	0.770	0.632	2e-26
351724703	186	uncharacterized protein LOC100527399 [Gl	0.675	0.650	0.613	7e-26
147790298	201	hypothetical protein VITISV_011279 [Viti	0.703	0.626	0.598	4e-24
359482884	201	PREDICTED: uncharacterized protein LOC10	0.703	0.626	0.591	6e-24
449446540	192	PREDICTED: uncharacterized protein LOC10	0.966	0.901	0.494	6e-22
225429388	190	PREDICTED: uncharacterized protein LOC10	0.664	0.626	0.580	1e-21
357500997	151	hypothetical protein MTR_6g090460 [Medic	0.486	0.576	0.645	2e-21

>gi|225445063|ref|XP_002280262.1| PREDICTED: uncharacterized protein LOC100249186 [Vitis vinifera]

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/184 (53%), Positives = 117/184 (63%), Gaps = 39/184 (21%)

Query: 8   SSKQIFQQLNSKKIDS---HEDSTFSIDSSLEEDSTNSVSSSMSSSEL------------ 52
           ++KQ F  L  K ID+   H+ + + I    ++   NS + SM SS              
Sbjct: 4   TAKQSFDDLGFKGIDANGNHQHNQWLIMGGADD---NSDTLSMESSSFEDSENSLESSSS 60

Query: 53  ---VEDASSSTSSSCSPSSSSSNGGPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASV 109
               EDASSSTS    P S+    GPLYE SELMAQLPIKRGLSK++QGKSQSFTSLASV
Sbjct: 61  LDLTEDASSSTS----PLSN----GPLYELSELMAQLPIKRGLSKYFQGKSQSFTSLASV 112

Query: 110 KNIEDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSKSYSPKAKATISKKSSIARGSFLS 169
           K++EDLAK   KG+   R KMKSCKSYGGGLD+   K Y+P  KATISKK+S  RGS LS
Sbjct: 113 KSLEDLAK---KGTP-SRKKMKSCKSYGGGLDV--HKLYTP--KATISKKAS--RGSLLS 162

Query: 170 SLAK 173
           SL +
Sbjct: 163 SLGR 166

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738740|emb|CBI27985.3| unnamed protein product [Vitis vinifera]

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/121 (68%), Positives = 93/121 (76%), Gaps = 18/121 (14%)

Query: 53  VEDASSSTSSSCSPSSSSSNGGPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKNI 112
            EDASSSTS    P S+    GPLYE SELMAQLPIKRGLSK++QGKSQSFTSLASVK++
Sbjct: 34  TEDASSSTS----PLSN----GPLYELSELMAQLPIKRGLSKYFQGKSQSFTSLASVKSL 85

Query: 113 EDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSKSYSPKAKATISKKSSIARGSFLSSLA 172
           EDLAK   KG+   R KMKSCKSYGGGLD+   K Y+P  KATISKK+S  RGS LSSL 
Sbjct: 86  EDLAK---KGTP-SRKKMKSCKSYGGGLDV--HKLYTP--KATISKKAS--RGSLLSSLG 135

Query: 173 K 173
           +
Sbjct: 136 R 136

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724793|ref|NP_001235790.1| uncharacterized protein LOC100526906 [Glycine max] gi|255631121|gb|ACU15926.1| unknown [Glycine max]

 Score =  125 bits (313), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/123 (65%), Positives = 94/123 (76%), Gaps = 8/123 (6%)

Query: 51  ELVEDASSSTSSSCSPSSSSSNGGPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVK 110
           EL EDASSS++S  S SSS SNG PL+E SELM+QLPIKRGLS FYQGK+QSF+SLASV+
Sbjct: 49  ELAEDASSSSASYLSTSSSHSNG-PLFELSELMSQLPIKRGLSMFYQGKAQSFSSLASVE 107

Query: 111 NIEDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSKSYSPKAKATISKKSSIARGSFLSS 170
           +I DL K   K   +YR KMKSCKS+ GGLD  H  S++P  KATISKKSS  R +F+S 
Sbjct: 108 SIGDLPK---KKERFYRKKMKSCKSFAGGLDSSHRISFAP--KATISKKSS--RATFVSV 160

Query: 171 LAK 173
           L K
Sbjct: 161 LTK 163

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546291|ref|XP_002514205.1| conserved hypothetical protein [Ricinus communis] gi|223546661|gb|EEF48159.1| conserved hypothetical protein [Ricinus communis]

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/158 (63%), Positives = 114/158 (72%), Gaps = 14/158 (8%)

Query: 26  DSTFSIDSSLEEDSTNSV--SSSMSSSELVEDASSSTSSSCSP-SSSSSNGGPLYEFSEL 82
           +ST S + S+ EDS NS+   SS  S++L EDASSS SSS S   SS +N GPLYE SEL
Sbjct: 37  ESTSSGEYSMGEDSINSIVSRSSCCSTDLEEDASSSASSSASTLVSSHANDGPLYELSEL 96

Query: 83  MAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAKMNIKGSHYY-RMKMKSCKSYGGGLD 141
           MAQLPIKRGLSKFY+GKSQS+TSLASVK+IEDLAK   K   Y  R K+KSCKSY   LD
Sbjct: 97  MAQLPIKRGLSKFYKGKSQSYTSLASVKSIEDLAK---KVRPYNSRSKLKSCKSY-AVLD 152

Query: 142 IGHSKSYSPKAKATISKKSSIARGSFLSSLAKSTNQVV 179
             H KS+SP  KATISKK+S  RGSFLSS  K    +V
Sbjct: 153 -AH-KSFSP--KATISKKAS--RGSFLSSSGKRGCSLV 184

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724703|ref|NP_001235531.1| uncharacterized protein LOC100527399 [Glycine max] gi|255632262|gb|ACU16489.1| unknown [Glycine max]

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/137 (61%), Positives = 95/137 (69%), Gaps = 16/137 (11%)

Query: 41  NSVSSSMSSSELVEDASSSTSSSCSPSSSSSNGGPLYEFSELMAQLPIKRGLSKFYQGKS 100
           NSV  S SSSEL EDASS  S+S   SSSS + GPL+E SELM QLPIKRGLS FYQGK+
Sbjct: 44  NSVWPS-SSSELAEDASSYLSTS---SSSSHSNGPLFELSELMNQLPIKRGLSMFYQGKA 99

Query: 101 QSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSKSYSPKAKATISKKS 160
           QSF+SLASV++IEDL K N     +YR KMKSCKS+ GGLD    +  S   KATISKK+
Sbjct: 100 QSFSSLASVESIEDLPKKN---ERFYRKKMKSCKSFAGGLDSSCHRIISFTPKATISKKA 156

Query: 161 SIA---------RGSFL 168
           S A         RGSFL
Sbjct: 157 SRATFVSAVLTKRGSFL 173

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790298|emb|CAN69977.1| hypothetical protein VITISV_011279 [Vitis vinifera]

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/142 (59%), Positives = 100/142 (70%), Gaps = 16/142 (11%)

Query: 37  EDSTNSVSSSMSSSELVEDASSSTSSSCSPSSSSSNGGPLYEFSELMAQLPIKRGLSKFY 96
           EDS  S  SS SSS+LV+DASSS++S  S  S S + GPLYE SELMAQLPIKRGLSK+Y
Sbjct: 56  EDSITSHGSSASSSDLVDDASSSSTSYSS-VSPSHSSGPLYELSELMAQLPIKRGLSKYY 114

Query: 97  QGKSQSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSKSYSPKAKATI 156
           +GKSQSFTSL+SV++IEDLAK        YR KMK CKSYGGGLD    K+Y+   +A I
Sbjct: 115 EGKSQSFTSLSSVRSIEDLAKKESP----YRRKMKVCKSYGGGLDT--HKAYT-LPRAII 167

Query: 157 SKKSSIA--------RGSFLSS 170
           SKK   A        RGSF++S
Sbjct: 168 SKKRGSAASLSLLSRRGSFVNS 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482884|ref|XP_002283537.2| PREDICTED: uncharacterized protein LOC100249745 [Vitis vinifera]

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/142 (59%), Positives = 100/142 (70%), Gaps = 16/142 (11%)

Query: 37  EDSTNSVSSSMSSSELVEDASSSTSSSCSPSSSSSNGGPLYEFSELMAQLPIKRGLSKFY 96
           EDS  S  SS SSS+LV+DASSS++S  S  S S + GPLYE +ELMAQLPIKRGLSK+Y
Sbjct: 56  EDSITSHGSSASSSDLVDDASSSSTSYSS-VSPSHSSGPLYELAELMAQLPIKRGLSKYY 114

Query: 97  QGKSQSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSKSYSPKAKATI 156
           +GKSQSFTSL+SV++IEDLAK        YR KMK CKSYGGGLD    K+Y+   +A I
Sbjct: 115 EGKSQSFTSLSSVRSIEDLAKKESP----YRRKMKVCKSYGGGLDT--HKAYT-LPRAII 167

Query: 157 SKKSSIA--------RGSFLSS 170
           SKK   A        RGSF++S
Sbjct: 168 SKKRGSAASLSLLSRRGSFVNS 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446540|ref|XP_004141029.1| PREDICTED: uncharacterized protein LOC101219805 [Cucumis sativus] gi|449487977|ref|XP_004157895.1| PREDICTED: uncharacterized LOC101219805 [Cucumis sativus]

 Score =  109 bits (272), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/184 (49%), Positives = 118/184 (64%), Gaps = 11/184 (5%)

Query: 3   IMESCSSKQIFQQLNSKKIDSHEDSTFS-IDSSLEEDSTNSVSSSMSSSELVEDASSSTS 61
           I+E   +   F++LN   +++ ED       +S   DS++  S   S+SEL+EDASSS+ 
Sbjct: 7   ILEDFEAMDQFRKLNWVIMETREDEVLEEASTSSTIDSSSMNSIESSASELLEDASSSSL 66

Query: 62  SSCSPSSSSS---NGGPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAKM 118
           +S S SS S    + GPLYE SELMA LPIKRGLSKFY GKSQSFTSLASVK++EDLAK 
Sbjct: 67  TSNSSSSLSLSPSDDGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASVKSLEDLAKR 126

Query: 119 NIKGSHY--YRMKMKSCKSYGGGLDIGHSKS-YSPKAKATISKKSSIARGSFLSSLA-KS 174
               ++Y   R K+K CKSYGG L+   S + YSP  K  I+KK S    S LSS+  K 
Sbjct: 127 MNHNNNYNSQRKKIKCCKSYGGSLESQKSSNYYSP--KPLIAKKVSRP-SSLLSSVCTKR 183

Query: 175 TNQV 178
           +N++
Sbjct: 184 SNRL 187

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429388|ref|XP_002275139.1| PREDICTED: uncharacterized protein LOC100243997 [Vitis vinifera] gi|296081587|emb|CBI20592.3| unnamed protein product [Vitis vinifera]

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/131 (58%), Positives = 93/131 (70%), Gaps = 12/131 (9%)

Query: 39  STNSVSSSMSSSELVEDASSSTSSSCSPSSSSSNGGPLYEFSELMAQLPIKRGLSKFYQG 98
           ST+S+ S+ S S+L +DA+SS   S S  SSS   GPLYE S+LMA LPIKRGLSK++QG
Sbjct: 53  STSSIGST-SLSDLQDDATSSMPLSSS--SSSLVNGPLYELSDLMAILPIKRGLSKYFQG 109

Query: 99  KSQSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKSYGGGLDIGHSKSYSPKAKATISK 158
           KS+SFTSL++V  IEDLA+         R +MKSCKSYGGGLDI H  SY+P  K  + K
Sbjct: 110 KSKSFTSLSNVSCIEDLARRETP----LRRRMKSCKSYGGGLDI-HKSSYAP--KPILLK 162

Query: 159 KSSIARGSFLS 169
           KS  A+GSF S
Sbjct: 163 KS--AKGSFPS 171

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357500997|ref|XP_003620787.1| hypothetical protein MTR_6g090460 [Medicago truncatula] gi|355495802|gb|AES77005.1| hypothetical protein MTR_6g090460 [Medicago truncatula]

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/96 (64%), Positives = 70/96 (72%), Gaps = 9/96 (9%)

Query: 76  LYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAKMNIKGSHYYRMKMKSCKS 135
           L +FSELM  LP+KRGLS FYQGK+QSFTSLA V+NIEDL K +I     Y  +MKSC+S
Sbjct: 58  LCDFSELMNNLPMKRGLSMFYQGKAQSFTSLAEVENIEDLPKKSIS----YNKRMKSCRS 113

Query: 136 YGGGLDIGHSKSYSPKAKATISKKSSIARGSFLSSL 171
           YGGGLD  H   YSP  KATISKK+S  RG   SSL
Sbjct: 114 YGGGLD-NHRIWYSP--KATISKKAS--RGPLSSSL 144

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
TAIR|locus:2167101	172	OXS3 "AT5G56550" [Arabidopsis	0.424	0.441	0.558	1.4e-16
TAIR|locus:4010713911	155	AT4G26288 "AT4G26288" [Arabido	0.301	0.348	0.5	3.6e-09
TAIR|locus:2097760	156	AT3G03170 [Arabidopsis thalian	0.162	0.185	0.689	1.1e-05
TAIR|locus:2101089	270	AT3G43850 "AT3G43850" [Arabido	0.245	0.162	0.5	2.1e-05
TAIR|locus:2125269	214	AT4G31510 "AT4G31510" [Arabido	0.217	0.182	0.538	0.00016
TAIR|locus:504956449	264	AT5G21940 "AT5G21940" [Arabido	0.195	0.132	0.485	0.00033
TAIR|locus:2149413	240	AT5G24890 "AT5G24890" [Arabido	0.234	0.175	0.452	0.00035

TAIR|locus:2167101 OXS3 "AT5G56550" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 43/77 (55%), Positives = 55/77 (71%)

Query:    72 NGGPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAKMNIKGSHYYRMKMK 131
             + GPL + S+LM+ LPIKRGLSKFY+GKSQSFTSL +VK++EDL K   K S  Y  K K
Sbjct:    71 SNGPLEDLSDLMSHLPIKRGLSKFYEGKSQSFTSLGNVKSLEDLMKRGFK-SRNYGAKRK 129

Query:   132 SCKSYGGGLDIGHSKSY 148
             S +S GG LD  + + +
Sbjct:   130 SSRSTGGILDQSYKRVF 146

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0016607 "nuclear speck" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IMP

TAIR|locus:4010713911 AT4G26288 "AT4G26288" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 33/66 (50%), Positives = 46/66 (69%)

Query:    72 NGGPLYEFSELMAQLPI----KRGLSKFYQGKSQSFTSLASVKNIEDLAKMNIKGSHYYR 127
             + GP  + S+L++QLPI    K GLSK+Y+GKSQSFTSLA+V +++DL K   +GS    
Sbjct:    56 SNGPFDDLSDLISQLPIIQVKKGGLSKYYKGKSQSFTSLANVTSLQDLVK---RGS---- 108

Query:   128 MKMKSC 133
              + KSC
Sbjct:   109 -RTKSC 113

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2097760 AT3G03170 [Arabidopsis thaliana (taxid:3702)]

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 20/29 (68%), Positives = 24/29 (82%)

Query:    89 KRGLSKFYQGKSQSFTSLASVKNIEDLAK 117
             +RGLSK Y+GKSQSFT+LA    +EDLAK
Sbjct:    56 RRGLSKHYKGKSQSFTTLAEALTVEDLAK 84

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2101089 AT3G43850 "AT3G43850" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query:    74 GPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKN--IEDLAK 117
             GPL     L   LPIKR +SKFY+GKS+SF SL+   +  ++DL K
Sbjct:    50 GPLDMMESLEEALPIKRAISKFYKGKSKSFMSLSETSSLPVKDLTK 95

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2125269 AT4G31510 "AT4G31510" [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
 Identities = 21/39 (53%), Positives = 24/39 (61%)

Query:    80 SELMAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAKM 118
             S L   LPIKRGLS  Y GKS+SF +L    N  DL K+
Sbjct:    74 SSLEDSLPIKRGLSNHYIGKSKSFGNLMEASNTNDLVKV 112

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504956449 AT5G21940 "AT5G21940" [Arabidopsis thaliana (taxid:3702)]

 Score = 94 (38.1 bits), Expect = 0.00033, P = 0.00033
 Identities = 17/35 (48%), Positives = 25/35 (71%)

Query:    74 GPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLAS 108
             GPL     L   LP+++G+SK+Y GKS+SFT+L +
Sbjct:    73 GPLEMMESLEQVLPVRKGISKYYSGKSKSFTNLTA 107

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2149413 AT5G24890 "AT5G24890" [Arabidopsis thaliana (taxid:3702)]

 Score = 93 (37.8 bits), Expect = 0.00035, P = 0.00035
 Identities = 19/42 (45%), Positives = 28/42 (66%)

Query:    76 LYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKNIEDLAK 117
             L   S L   LP KRGLS  Y+GKS+SF +L  + +++++AK
Sbjct:    95 LASMSSLEDSLPSKRGLSNHYKGKSKSFGNLGEIGSVKEVAK 136


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.129   0.355    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      179       125   0.00091  102 3  11 23  0.40    31
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  507 (54 KB)
  Total size of DFA:  107 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.83u 0.14s 9.97t   Elapsed:  00:00:00
  Total cpu time:  9.83u 0.14s 9.97t   Elapsed:  00:00:00
  Start:  Fri May 10 21:35:53 2013   End:  Fri May 10 21:35:53 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	179
KOG4210	285	consensus Nuclear localization sequence binding pr	96.68

>KOG4210 consensus Nuclear localization sequence binding protein [Transcription]

Probab=96.68  E-value=0.00038  Score=60.59  Aligned_cols=54  Identities=28%  Similarity=0.204  Sum_probs=46.5

Q ss_pred             CCCcchHHHHHhcccccCcccccccccccccccccCCC-hhhhhhccccCCCCchhhhc
Q 030357           74 GPLYEFSELMAQLPIKRGLSKFYQGKSQSFTSLASVKN-IEDLAKMNIKGSHYYRMKMK  131 (179)
Q Consensus        74 GpL~~m~sL~~~LPiKRGLSkfY~GKSkSFtsLa~v~s-veDLaK~e~K~~~Py~kkrK  131 (179)
                      .+...|+.|++.||+|||++++|.||+++|++|+.+.. +.+..+.++    |.+.+|+
T Consensus       115 ~~~~~~S~~~~~~~sk~~~s~~f~~ks~~~~~l~~s~~~~~~~~~~~~----dl~~~~~  169 (285)
T KOG4210|consen  115 RVDARSSSLEDSLSSKGGLSVHFAGKSQFFAALEESGSKVLDGNKGEK----DLNTRRG  169 (285)
T ss_pred             cccchhhhhccccccccceeeccccHHHHHHHHHhhhccccccccccC----ccccccc
Confidence            57778999999999999999999999999999999987 788888777    6554443

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00