Citrus Sinensis ID: 030404

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTGGGGGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccEEEEccccccccccccccccccccHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccEEcccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHEcccccEEEccccEEEccEcccccccccccHHHHHHHHHHHHccEEEccHcccc
Coil and Loop (DISEMBL)
maqktekeetefkvpetltlcvnncgftgnpatnnmcqkcfnatatttasavagsstgggggggSGVAIIKFSsekslrsrpiirsgssdaagttgqnqeltDRREKEANVEKRVVNrcsgcrrkvgltgfrcrcgelfcgehrysdrhdcsydyksagrdaiarenpVIKAAKIVRV
Flexible Loop (DISEMBL)
maqktekeetefkvpetLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGsstggggggGSGVAIIKFSsekslrsrpiirsgssdaagttgqnqeltdrrekeanvekrvvnrcsgcrrkvgltgfrcRCGElfcgehrysdrhDCSYDYKSAgrdaiarenpvikaakivrv
Low Complexity Region (SEG)
MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNatatttasavagsstgggggggsgvaIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV
Disordered region (IsUnstruct)
*************VPETLTLCVNNCGFTGNPATNNMCQKCFNATAT*******************************************************************RVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIA**************
Disordered Region (DISOPRED)
********************CVNNCGFTGNPATNNMCQKCF******************************FSSEKSLRSRPIIR****************************RVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV
Disordered Region (DISEMBL)
*************VPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTGGGGGGGSGVAIIKFSSEKSLRSRPIIRSG*************************KRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV
Disordered Region (DISPRO)
****************TLTLCVNNCGFTGNPATNNMCQKCFNATATTT*******************************************************************VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKI*R*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTGGGGGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	178	2.2.26 [Sep-21-2011]
Q9LHJ8	160	Zinc finger A20 and AN1 d	yes	no	0.848	0.943	0.556	3e-45
Q84PD8	170	Zinc finger A20 and AN1 d	yes	no	0.898	0.941	0.494	2e-38
A3C039	164	Zinc finger A20 and AN1 d	no	no	0.904	0.981	0.497	6e-38
A2Z2J6	164	Zinc finger A20 and AN1 d	N/A	no	0.904	0.981	0.497	6e-38
Q852K5	160	Zinc finger A20 and AN1 d	no	no	0.882	0.981	0.403	5e-32
A3BDI8	171	Zinc finger A20 and AN1 d	no	no	0.893	0.929	0.403	2e-31
A2YEZ6	171	Zinc finger A20 and AN1 d	N/A	no	0.893	0.929	0.403	2e-31
Q7Y1W9	161	Zinc finger A20 and AN1 d	no	no	0.882	0.975	0.406	9e-31
Q6H7P8	173	Zinc finger A20 and AN1 d	no	no	0.887	0.913	0.390	2e-30
Q94B40	170	Zinc finger A20 and AN1 d	no	no	0.943	0.988	0.374	2e-26

>sp|Q9LHJ8|SAP5_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=2 SV=1

 Score =  181 bits (458), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/187 (55%), Positives = 121/187 (64%), Gaps = 36/187 (19%)

Query: 1   MAQKTEKEETEFKVPETLTLCVNNC-----GFTGNPATNNMCQKCFNATATTTASAVAGS 55
           MAQ+TEKEETEFKV ETLT           G T NPATNNMCQKCFNA+  + A+ V  S
Sbjct: 1   MAQRTEKEETEFKVLETLTTTTTTLCTNNCGVTANPATNNMCQKCFNASLVSAAAGVVES 60

Query: 56  STGGGGGGGSGVAIIKFSSEK-SLRSRP---IIRSGSSDAAGTTGQNQELTDRREKEANV 111
            +           I+K S+   +LRS P   +IR    DA     Q              
Sbjct: 61  GS-----------ILKRSARSVNLRSSPAKVVIRPREIDAVKKRDQ-------------- 95

Query: 112 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIK 171
             ++VNRCSGCR+KVGLTGFRCRCGELFC EHRYSDRHDCSYDYK+AGR+AIARENPV+K
Sbjct: 96  --QIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVK 153

Query: 172 AAKIVRV 178
           AAK+V+V
Sbjct: 154 AAKMVKV 160

May be involved in environmental stress response.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84PD8|SAP11_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1

 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/186 (49%), Positives = 112/186 (60%), Gaps = 26/186 (13%)

Query: 1   MAQKTEK--EETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTG 58
           MAQ+ +K  E TE + PE +TLC N+CGF GNPATNN+CQ CF A + +++S+ A +S  
Sbjct: 1   MAQREKKVEEPTELRAPE-MTLCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAAS-- 57

Query: 59  GGGGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRV--- 115
                          S  SL   P++         +      L   R     VE      
Sbjct: 58  --------------PSTTSLPVFPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKAS 103

Query: 116 ----VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIK 171
               VNRC  CRR+VGLTGFRCRCGEL+CG HRYSDRHDCS+DYKSA RDAIARENPV++
Sbjct: 104 RSSSVNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVR 163

Query: 172 AAKIVR 177
           AAKIVR
Sbjct: 164 AAKIVR 169

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A3C039|SAP1_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2

 Score =  156 bits (395), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/179 (49%), Positives = 108/179 (60%), Gaps = 18/179 (10%)

Query: 1   MAQ--KTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTG 58
           MAQ  K ++E TE + PE +TLC N+CGF GNPAT N+CQ CF A   +T+S  + SS  
Sbjct: 1   MAQRDKKDQEPTELRAPE-ITLCANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSSPV 59

Query: 59  GGGGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNR 118
                    A +    E      P +   +S  A       + +             VNR
Sbjct: 60  LDKQPPRPAAPL---VEPQAPLPPPVEEMASALATAPAPVAKTS------------AVNR 104

Query: 119 CSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 177
           CS CR++VGLTGFRCRCG LFCGEHRYSDRH CSYDYKSA RDAIAR+NPV++AAKIVR
Sbjct: 105 CSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 163

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2Z2J6|SAP1_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1

 Score =  156 bits (395), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/179 (49%), Positives = 108/179 (60%), Gaps = 18/179 (10%)

Query: 1   MAQ--KTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTG 58
           MAQ  K ++E TE + PE +TLC N+CGF GNPAT N+CQ CF A   +T+S  + SS  
Sbjct: 1   MAQRDKKDQEPTELRAPE-ITLCANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSSPV 59

Query: 59  GGGGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNR 118
                    A +    E      P +   +S  A       + +             VNR
Sbjct: 60  LDKQPPRPAAPL---VEPQAPLPPPVEEMASALATAPAPVAKTS------------AVNR 104

Query: 119 CSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 177
           CS CR++VGLTGFRCRCG LFCGEHRYSDRH CSYDYKSA RDAIAR+NPV++AAKIVR
Sbjct: 105 CSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 163

May be involved in environmental stress response.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q852K5|SAP6_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1

 Score =  137 bits (344), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 99/181 (54%), Gaps = 24/181 (13%)

Query: 1   MAQ---KTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSST 57
           MAQ   K E EET    PE   LCVNNCGF G+  T NMC KC+  T    A  VA    
Sbjct: 1   MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTVK--AKTVA---- 54

Query: 58  GGGGGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVN 117
                      +++     SL S P++   +   +G+    +++      E +  K   N
Sbjct: 55  ----------TVVEKKPLASLSSTPLVTEVTDGGSGSVADGKQVM-----EEDTPKPPSN 99

Query: 118 RCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 177
           RC  CR+KVGLTGF+CRCG  FC  HRY+D H C++DYK  GR+ IA++NP++KA KI +
Sbjct: 100 RCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITK 159

Query: 178 V 178
           +
Sbjct: 160 I 160

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A3BDI8|SAP8_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1

 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 103/186 (55%), Gaps = 27/186 (14%)

Query: 5   TEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNAT------ATTTASAVAGSSTG 58
            E +ET  + PE   LC+NNCGF G+ AT NMC KC          A   AS++     G
Sbjct: 1   MEHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNG 60

Query: 59  GGGG------GGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVE 112
           G  G      G + VA+ +    K+L ++P   +G S+      + +E            
Sbjct: 61  GDSGKEPIIAGHAEVAVAQVEV-KTLVAQPAEIAGPSEGVTVNPKGREGP---------- 109

Query: 113 KRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKA 172
               NRCS CR++VGLTGF CRCG L+C  HRYSD+HDC +DY++A RDAIA+ NPV+KA
Sbjct: 110 ----NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKA 165

Query: 173 AKIVRV 178
            K+ ++
Sbjct: 166 EKLDKI 171

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2

 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 103/186 (55%), Gaps = 27/186 (14%)

Query: 5   TEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNAT------ATTTASAVAGSSTG 58
            E +ET  + PE   LC+NNCGF G+ AT NMC KC          A   AS++     G
Sbjct: 1   MEHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNG 60

Query: 59  GGGG------GGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVE 112
           G  G      G + VA+ +    K+L ++P   +G S+      + +E            
Sbjct: 61  GDSGKEPIIAGHAEVAVAQVEV-KTLVAQPAEIAGPSEGVTVNPKGREGP---------- 109

Query: 113 KRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKA 172
               NRCS CR++VGLTGF CRCG L+C  HRYSD+HDC +DY++A RDAIA+ NPV+KA
Sbjct: 110 ----NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKA 165

Query: 173 AKIVRV 178
            K+ ++
Sbjct: 166 EKLDKI 171

May be involved in environmental stress response.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q7Y1W9|SAP9_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1

 Score =  132 bits (333), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 100/182 (54%), Gaps = 25/182 (13%)

Query: 1   MAQKTEKEETEFKV--PETLTLCVNNCGFTGNPATNNMCQKCFN--ATATTTASAVAGSS 56
           MAQ++ K E+E  V  PE   LCVNNCGF G+  TNNMC KC+      TT A+ V    
Sbjct: 1   MAQESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKK 60

Query: 57  TGGGGGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVV 116
                      A    SS K+    P+  +   +      ++++      K  +      
Sbjct: 61  -----------AFTPASSSKT----PLEPAKPDEVPAAAVEDKQAAQEPPKPPS------ 99

Query: 117 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIV 176
           NRC  CR+KVGLTGF+CRCG  FC  HRY++ HDC++DYK AGRD IA++NPV+ A KI 
Sbjct: 100 NRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKIN 159

Query: 177 RV 178
           ++
Sbjct: 160 KI 161

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6H7P8|SAP4_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1

 Score =  132 bits (331), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 29/187 (15%)

Query: 6   EKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNAT------ATTTASAVAGSSTGG 59
           E +E   + PE   LC+NNCGF G+ AT NMC KC          A   AS++     G 
Sbjct: 2   EHKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGC 61

Query: 60  GGG--------GGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANV 111
            GG        G + VA+ +  + K+L  +P      +D AGT+ +   +   +E     
Sbjct: 62  DGGKEHIVAASGSTAVAVAQVEA-KTLVVQP------TDVAGTSEEVAVVPKVKEGP--- 111

Query: 112 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIK 171
                NRC+ CR++VGLTGF CRCG ++C  HRYSD+H+C +DY++A RDAIA+ NPV+K
Sbjct: 112 -----NRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVK 166

Query: 172 AAKIVRV 178
           A K+ ++
Sbjct: 167 AEKLDKI 173

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q94B40|SAP6_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2

 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 3/171 (1%)

Query: 8   EETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTGGGGGGGSGV 67
           EE   + PE+  LCVNNCGF G+ AT N+C  C+           +   +          
Sbjct: 3   EEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSP 62

Query: 68  AIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVG 127
                S   S    P++++ S        + + +      E N ++R  NRC+ CR++VG
Sbjct: 63  PSSSSSEISSPIIPPLLKNPSVKLE--VPEKKAVISLPTTEQNQQQRP-NRCTTCRKRVG 119

Query: 128 LTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
           LTGF+CRCG +FCG HRY + H CSYD+KSAGR+ IA+ NP++KAAK+ ++
Sbjct: 120 LTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
356557142	161	PREDICTED: zinc finger A20 and AN1 domai	0.904	1.0	0.623	4e-55
224055247	181	predicted protein [Populus trichocarpa]	0.971	0.955	0.634	5e-55
449436277	159	PREDICTED: zinc finger A20 and AN1 domai	0.882	0.987	0.622	1e-53
224106053	179	predicted protein [Populus trichocarpa]	0.971	0.966	0.630	9e-53
359487271	172	PREDICTED: zinc finger A20 and AN1 domai	0.966	1.0	0.634	8e-51
88866527	188	stress-associated protein 1 [Solanum lyc	1.0	0.946	0.601	1e-50
358249158	164	zinc finger A20 and AN1 domain-containin	0.921	1.0	0.606	2e-49
449463761	169	PREDICTED: zinc finger A20 and AN1 domai	0.932	0.982	0.629	2e-49
18399690	160	zinc finger A20 and AN1 domain-containin	0.848	0.943	0.556	1e-43
297829802	160	hypothetical protein ARALYDRAFT_478622 [	0.842	0.937	0.547	5e-43

>gi|356557142|ref|XP_003546877.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Glycine max]

 Score =  219 bits (558), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 111/178 (62%), Positives = 130/178 (73%), Gaps = 17/178 (9%)

Query: 1   MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTGGG 60
           MAQKTEKEET+FKVPET+TLCVNNCG TGNPATNNMCQKCF A+  TT+           
Sbjct: 1   MAQKTEKEETDFKVPETITLCVNNCGVTGNPATNNMCQKCFTASTATTS----------- 49

Query: 61  GGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCS 120
           G GG+G+A    ++   + +RP  RS   + +       +     +   +  KRVVNRCS
Sbjct: 50  GAGGAGIA--SPATRSGVSARPQKRSFPEEPSPVA----DPPSSDQTTPSEAKRVVNRCS 103

Query: 121 GCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
           GCRRKVGLTGFRCRCGELFC EHRYSDRHDCSYDYK+AGR+AIARENPVI+AAKIV+V
Sbjct: 104 GCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVIRAAKIVKV 161

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055247|ref|XP_002298442.1| predicted protein [Populus trichocarpa] gi|118486081|gb|ABK94884.1| unknown [Populus trichocarpa] gi|222845700|gb|EEE83247.1| predicted protein [Populus trichocarpa]

 Score =  219 bits (557), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 118/186 (63%), Positives = 140/186 (75%), Gaps = 13/186 (6%)

Query: 1   MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTGGG 60
           MAQ+TEKEETE KVPE LTLC+NNCG TGNPATNNMCQKCFNA+ +T+  + + ++T   
Sbjct: 1   MAQRTEKEETECKVPENLTLCINNCGVTGNPATNNMCQKCFNASTSTSNPSSSTTTTTTT 60

Query: 61  G------GGGSGVAIIKFSSEKSLRSRPIIRSGSSDAA--GTTGQNQELTDRREKEANVE 112
                   G S   I+KF+SEKSLRS  I RS + D      T  ++E +D     ++V 
Sbjct: 61  ITFAATTNGVSTNEILKFTSEKSLRS-SISRSPAKDHQRQPKTASDKERSD----SSSVA 115

Query: 113 KRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKA 172
           K+ VNRCSGCRR+VGLTGFRCRCGELFC EHRYSDRHDCSYDYK+ GR+AIARENPV+KA
Sbjct: 116 KKEVNRCSGCRRRVGLTGFRCRCGELFCWEHRYSDRHDCSYDYKTVGREAIARENPVVKA 175

Query: 173 AKIVRV 178
           AKIVRV
Sbjct: 176 AKIVRV 181

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436277|ref|XP_004135919.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucumis sativus] gi|449489065|ref|XP_004158204.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucumis sativus]

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/180 (62%), Positives = 127/180 (70%), Gaps = 23/180 (12%)

Query: 1   MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTGGG 60
           MAQ+TEKEETEFKVPET+TLCVNNCG TGNP TNNMCQKCFNAT  T + A         
Sbjct: 1   MAQRTEKEETEFKVPETITLCVNNCGLTGNPTTNNMCQKCFNATTATASMA--------- 51

Query: 61  GGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTD--RREKEANVEKRVVNR 118
                    IKFS EKS RS     S S +      +++ +     R K     KR VNR
Sbjct: 52  ---------IKFSGEKSPRS---TTSRSPEKFRFVSESRRIITAADRPKPDESAKREVNR 99

Query: 119 CSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
           CSGCR++VGLTGFRCRCG+LFC EHRYSDRHDCS+DYK+AGR+AIARENPV+KAAKIVRV
Sbjct: 100 CSGCRKRVGLTGFRCRCGDLFCAEHRYSDRHDCSFDYKAAGREAIARENPVVKAAKIVRV 159

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106053|ref|XP_002314027.1| predicted protein [Populus trichocarpa] gi|222850435|gb|EEE87982.1| predicted protein [Populus trichocarpa]

 Score =  211 bits (537), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 116/184 (63%), Positives = 136/184 (73%), Gaps = 11/184 (5%)

Query: 1   MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGS----S 56
           MAQ+ EKEETEFKVPETLT C+NNCG TGNPATNNMCQKCFNA+ +T+ S+ + +    +
Sbjct: 1   MAQRAEKEETEFKVPETLTSCINNCGVTGNPATNNMCQKCFNASTSTSNSSSSSTATSMT 60

Query: 57  TGGGGGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGT--TGQNQELTDRREKEANVEKR 114
                   S   I+KF+ EKS RS  I RS   D   +  T  ++E    R    +V K+
Sbjct: 61  FAATATSVSNNEILKFTGEKSARS-SISRSLVKDPQKSPETASDKE----RSCAYHVAKK 115

Query: 115 VVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAK 174
            VNRCSGCRR+VGLTGFRCRCGELFC EHRYSDRHDCSYDYK+AGR+AIARENPV+KAAK
Sbjct: 116 EVNRCSGCRRRVGLTGFRCRCGELFCWEHRYSDRHDCSYDYKTAGREAIARENPVVKAAK 175

Query: 175 IVRV 178
           IVRV
Sbjct: 176 IVRV 179

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487271|ref|XP_003633555.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Vitis vinifera]

 Score =  204 bits (520), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 113/178 (63%), Positives = 129/178 (72%), Gaps = 6/178 (3%)

Query: 1   MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTGGG 60
           MAQKTEKEETEFKVPETL LCVNNCGFTGNPATNNMCQKCF+A+A+  A+A AG+     
Sbjct: 1   MAQKTEKEETEFKVPETLALCVNNCGFTGNPATNNMCQKCFSASASAAAAAAAGALKSSH 60

Query: 61  GGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCS 120
              G G A  + SS +S      +   S D          +     +E    KR VNRCS
Sbjct: 61  KVSG-GAADARSSSARSPERMDSLAETSLDRTKDAASAAAV-----EEVGKVKREVNRCS 114

Query: 121 GCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
           GCRRKVGLTGFRCRCG+LFC EHRY+DRH+CSYDYK+AGR+AIARENPV+KAAKIVRV
Sbjct: 115 GCRRKVGLTGFRCRCGDLFCAEHRYTDRHECSYDYKTAGREAIARENPVVKAAKIVRV 172

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|88866527|gb|ABD57310.1| stress-associated protein 1 [Solanum lycopersicum]

 Score =  204 bits (519), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/188 (60%), Positives = 134/188 (71%), Gaps = 10/188 (5%)

Query: 1   MAQKTEKEETEFK-VPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSS--- 56
           MAQ+TEKEETEFK VPET+TLC+NNCG TGNPATNNMCQKCFNAT   T+++ +  +   
Sbjct: 1   MAQRTEKEETEFKAVPETITLCINNCGVTGNPATNNMCQKCFNATTAATSTSSSSPTGTS 60

Query: 57  -TGGGGGGGSGVAIIKFSSEKSLRSRPIIRSG---SSDAAGTTGQNQELTDRREKEANVE 112
            T         V   K +   SLRS P  +S     S      G    + +  + +A++ 
Sbjct: 61  VTIPHNFAEKLVRSEKSARFSSLRSSPDRKSDLDRMSQDLKKVGDTMMVKEEDQLKASLP 120

Query: 113 --KRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVI 170
             KR VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYK+AGR+AIARENPV+
Sbjct: 121 PAKREVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKTAGREAIARENPVV 180

Query: 171 KAAKIVRV 178
           KAAKI++V
Sbjct: 181 KAAKIIKV 188

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249158|ref|NP_001240258.1| zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Glycine max] gi|300510880|gb|ADK25058.1| AN1-like transcription factor [Glycine max]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/178 (60%), Positives = 125/178 (70%), Gaps = 14/178 (7%)

Query: 1   MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTGGG 60
           MAQKTEKEET+FKVPET+TLCVNNCG TGNPATNNMCQKCF A  T+TA+          
Sbjct: 1   MAQKTEKEETDFKVPETITLCVNNCGVTGNPATNNMCQKCFTAFTTSTATTSGAGGA--- 57

Query: 61  GGGGSGVAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCS 120
                   I   ++   + +RP+ RS   + +             +   +  KRVVNRCS
Sbjct: 58  -------GIASPATRSGISARPLKRSFPEEPSPPADPPSSD----QTTPSEAKRVVNRCS 106

Query: 121 GCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
           GCRRKVGLTGFRCRCGELFC EHRYSDRHDCSYDYK+AGR+AIARENPVI+AAKIV+V
Sbjct: 107 GCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVIRAAKIVKV 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463761|ref|XP_004149600.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucumis sativus] gi|449532105|ref|XP_004173024.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucumis sativus]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/181 (62%), Positives = 127/181 (70%), Gaps = 15/181 (8%)

Query: 1   MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTGGG 60
           MAQ+TEKEETE KVPET+TLCVNNCGFTGNP TNNMCQKCFNAT  T  +    SS  G 
Sbjct: 1   MAQRTEKEETELKVPETITLCVNNCGFTGNPTTNNMCQKCFNATTATATTTATSSSNTGI 60

Query: 61  GGGGSGVAIIKFSSEKSLRSR---PIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVN 117
                     K S EKS RSR   P++     D++     +      R K     KR VN
Sbjct: 61  SSSR------KLSGEKSSRSRSRSPVLMDSVRDSSRNISMD------RFKSEESAKRQVN 108

Query: 118 RCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 177
           RCSGCR++VGLTGFRCRCGELFC EHRYSDRHDCS+DYK+AGRDAIARENPV+KA KIVR
Sbjct: 109 RCSGCRKRVGLTGFRCRCGELFCAEHRYSDRHDCSFDYKAAGRDAIARENPVVKAPKIVR 168

Query: 178 V 178
           V
Sbjct: 169 V 169

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18399690|ref|NP_566429.1| zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Arabidopsis thaliana] gi|75335009|sp|Q9LHJ8.1|SAP5_ARATH RecName: Full=Zinc finger A20 and AN1 domain-containing stress-associated protein 5; Short=AtSAP5 gi|12321951|gb|AAG51008.1|AC069474_7 unknown protein; 15087-14605 [Arabidopsis thaliana] gi|9294357|dbj|BAB02254.1| unnamed protein product [Arabidopsis thaliana] gi|21536983|gb|AAM61324.1| unknown [Arabidopsis thaliana] gi|32815927|gb|AAP88348.1| At3g12630 [Arabidopsis thaliana] gi|110736612|dbj|BAF00270.1| hypothetical protein [Arabidopsis thaliana] gi|332641705|gb|AEE75226.1| zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Arabidopsis thaliana]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/187 (55%), Positives = 121/187 (64%), Gaps = 36/187 (19%)

Query: 1   MAQKTEKEETEFKVPETLTLCVNNC-----GFTGNPATNNMCQKCFNATATTTASAVAGS 55
           MAQ+TEKEETEFKV ETLT           G T NPATNNMCQKCFNA+  + A+ V  S
Sbjct: 1   MAQRTEKEETEFKVLETLTTTTTTLCTNNCGVTANPATNNMCQKCFNASLVSAAAGVVES 60

Query: 56  STGGGGGGGSGVAIIKFSSEK-SLRSRP---IIRSGSSDAAGTTGQNQELTDRREKEANV 111
            +           I+K S+   +LRS P   +IR    DA     Q              
Sbjct: 61  GS-----------ILKRSARSVNLRSSPAKVVIRPREIDAVKKRDQ-------------- 95

Query: 112 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIK 171
             ++VNRCSGCR+KVGLTGFRCRCGELFC EHRYSDRHDCSYDYK+AGR+AIARENPV+K
Sbjct: 96  --QIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVK 153

Query: 172 AAKIVRV 178
           AAK+V+V
Sbjct: 154 AAKMVKV 160

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829802|ref|XP_002882783.1| hypothetical protein ARALYDRAFT_478622 [Arabidopsis lyrata subsp. lyrata] gi|297328623|gb|EFH59042.1| hypothetical protein ARALYDRAFT_478622 [Arabidopsis lyrata subsp. lyrata]

 Score =  179 bits (453), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/188 (54%), Positives = 121/188 (64%), Gaps = 38/188 (20%)

Query: 1   MAQKTEKEETEFKVPETLTLCVNNC------GFTGNPATNNMCQKCFNATATTTASAVAG 54
           MAQ+TEKEETEFKV +TLT            G T NPATNNMCQKCFNA+  + A+ V  
Sbjct: 1   MAQRTEKEETEFKVLDTLTTTTTTTLCTNNCGVTANPATNNMCQKCFNASLVSAAAGVVE 60

Query: 55  SSTGGGGGGGSGVAIIKFSSEK-SLRSRP---IIRSGSSDAAGTTGQNQELTDRREKEAN 110
           S +           I+K S+   +LRS P   +IR+   DA     Q             
Sbjct: 61  SGS-----------ILKRSARSVNLRSSPAKVVIRTREIDAVKRDQQ------------- 96

Query: 111 VEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVI 170
               +VNRCSGCR+KVGLTGFRCRCGELFC EHRYSDRHDCSYDYK+AGR+AIARENPV+
Sbjct: 97  ----IVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVV 152

Query: 171 KAAKIVRV 178
           KAAK+V+V
Sbjct: 153 KAAKMVKV 160

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
TAIR|locus:2101217	160	SAP5 "stress associated protei	0.410	0.456	0.805	2.3e-48
TAIR|locus:2083208	170	AT3G52800 [Arabidopsis thalian	0.943	0.988	0.374	5.6e-29
RGD|1310776	213	Zfand5 "zinc finger, AN1-type	0.578	0.483	0.462	7.6e-29
MGI|MGI:1278334	213	Zfand5 "zinc finger, AN1-type	0.578	0.483	0.453	1.6e-28
UNIPROTKB|E2RMV3	213	ZFAND5 "Uncharacterized protei	0.573	0.478	0.467	2e-28
UNIPROTKB|O76080	213	ZFAND5 "AN1-type zinc finger p	0.573	0.478	0.467	2e-28
UNIPROTKB|A4U9C9	213	LOC100737314 "Zinc finger prot	0.573	0.478	0.467	2e-28
UNIPROTKB|I3LS37	206	ZFAND5 "Uncharacterized protei	0.573	0.495	0.467	2e-28
UNIPROTKB|A7MBA8	213	ZFAND5 "ZFAND5 protein" [Bos t	0.573	0.478	0.467	2.5e-28
TAIR|locus:2049505	161	AT2G36320 [Arabidopsis thalian	0.348	0.385	0.580	3.2e-28

TAIR|locus:2101217 SAP5 "stress associated protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
 Identities = 62/77 (80%), Positives = 71/77 (92%)

Query:   105 REKEANVEKR---VVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRD 161
             RE +A V+KR   +VNRCSGCR+KVGLTGFRCRCGELFC EHRYSDRHDCSYDYK+AGR+
Sbjct:    85 REIDA-VKKRDQQIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGRE 143

Query:   162 AIARENPVIKAAKIVRV 178
             AIARENPV+KAAK+V+V
Sbjct:   144 AIARENPVVKAAKMVKV 160

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009414 "response to water deprivation" evidence=IMP

GO:0016567 "protein ubiquitination" evidence=IDA

GO:0051865 "protein autoubiquitination" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

TAIR|locus:2083208 AT3G52800 [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 64/171 (37%), Positives = 92/171 (53%)

Query:     8 EETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXX 67
             EE   + PE+  LCVNNCGF G+ AT N+C  C+                          
Sbjct:     3 EEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSP 62

Query:    68 XIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVG 127
                  S   S    P++++ S        + + +      E N ++R  NRC+ CR++VG
Sbjct:    63 PSSSSSEISSPIIPPLLKNPSVKLE--VPEKKAVISLPTTEQNQQQRP-NRCTTCRKRVG 119

Query:   128 LTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
             LTGF+CRCG +FCG HRY + H CSYD+KSAGR+ IA+ NP++KAAK+ ++
Sbjct:   120 LTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

RGD|1310776 Zfand5 "zinc finger, AN1-type domain 5" [Rattus norvegicus (taxid:10116)]

 Score = 252 (93.8 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
 Identities = 50/108 (46%), Positives = 64/108 (59%)

Query:    71 KFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTG 130
             K +S K+  S P++   S   +  +    E     EK   + K   NRC  CR+KVGLTG
Sbjct:   111 KITSPKTEVSEPVVTQPSPSVSQPSSSQSE-----EKAPELPKPKKNRCFMCRKKVGLTG 165

Query:   131 FRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
             F CRCG LFCG HRYSD+H+C YDYK+     I +ENPV+ A KI R+
Sbjct:   166 FDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213

GO:0001701 "in utero embryonic development" evidence=IEA;ISO

GO:0001944 "vasculature development" evidence=IEA;ISO

GO:0003016 "respiratory system process" evidence=IEA;ISO

GO:0003677 "DNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA;ISO

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA;ISO

GO:0048705 "skeletal system morphogenesis" evidence=IEA;ISO

GO:0048745 "smooth muscle tissue development" evidence=IEA;ISO

GO:0060324 "face development" evidence=IEA;ISO

MGI|MGI:1278334 Zfand5 "zinc finger, AN1-type domain 5" [Mus musculus (taxid:10090)]

 Score = 249 (92.7 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
 Identities = 49/108 (45%), Positives = 64/108 (59%)

Query:    71 KFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTG 130
             K ++ K+  S P++   S   +  +    E     EK   + K   NRC  CR+KVGLTG
Sbjct:   111 KITTPKTEVSEPVVTQPSPSVSQPSSSQSE-----EKAPELPKPKKNRCFMCRKKVGLTG 165

Query:   131 FRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
             F CRCG LFCG HRYSD+H+C YDYK+     I +ENPV+ A KI R+
Sbjct:   166 FDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0001944 "vasculature development" evidence=IMP

GO:0003016 "respiratory system process" evidence=IMP

GO:0003677 "DNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IMP

GO:0048705 "skeletal system morphogenesis" evidence=IMP

GO:0048745 "smooth muscle tissue development" evidence=IMP

GO:0060324 "face development" evidence=IMP

UNIPROTKB|E2RMV3 ZFAND5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 248 (92.4 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
 Identities = 51/109 (46%), Positives = 68/109 (62%)

Query:    71 KFSSEKSLRSRPIIRSGS-SDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLT 129
             K ++ K+  S P++   S S +  +T Q++E      K   + K   NRC  CR+KVGLT
Sbjct:   111 KITTPKTEVSEPVVTQPSPSVSQPSTSQSEE------KAPELPKPKKNRCFMCRKKVGLT 164

Query:   130 GFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
             GF CRCG LFCG HRYSD+H+C YDYK+     I +ENPV+ A KI R+
Sbjct:   165 GFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213

GO:0060324 "face development" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|O76080 ZFAND5 "AN1-type zinc finger protein 5" [Homo sapiens (taxid:9606)]

 Score = 248 (92.4 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
 Identities = 51/109 (46%), Positives = 68/109 (62%)

Query:    71 KFSSEKSLRSRPIIRSGS-SDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLT 129
             K ++ K+  S P++   S S +  +T Q++E      K   + K   NRC  CR+KVGLT
Sbjct:   111 KITTPKTEVSEPVVTQPSPSVSQPSTSQSEE------KAPELPKPKKNRCFMCRKKVGLT 164

Query:   130 GFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
             GF CRCG LFCG HRYSD+H+C YDYK+     I +ENPV+ A KI R+
Sbjct:   165 GFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0060324 "face development" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|A4U9C9 LOC100737314 "Zinc finger protein 216" [Sus scrofa (taxid:9823)]

 Score = 248 (92.4 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
 Identities = 51/109 (46%), Positives = 68/109 (62%)

Query:    71 KFSSEKSLRSRPIIRSGS-SDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLT 129
             K ++ K+  S P++   S S +  +T Q++E      K   + K   NRC  CR+KVGLT
Sbjct:   111 KITTPKTEVSEPVVTQPSPSVSQPSTSQSEE------KAPELPKPKKNRCFMCRKKVGLT 164

Query:   130 GFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
             GF CRCG LFCG HRYSD+H+C YDYK+     I +ENPV+ A KI R+
Sbjct:   165 GFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|I3LS37 ZFAND5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 248 (92.4 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
 Identities = 51/109 (46%), Positives = 68/109 (62%)

Query:    71 KFSSEKSLRSRPIIRSGS-SDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLT 129
             K ++ K+  S P++   S S +  +T Q++E      K   + K   NRC  CR+KVGLT
Sbjct:   104 KITTPKTEVSEPVVTQPSPSVSQPSTSQSEE------KAPELPKPKKNRCFMCRKKVGLT 157

Query:   130 GFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
             GF CRCG LFCG HRYSD+H+C YDYK+     I +ENPV+ A KI R+
Sbjct:   158 GFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 206

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|A7MBA8 ZFAND5 "ZFAND5 protein" [Bos taurus (taxid:9913)]

 Score = 247 (92.0 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
 Identities = 51/109 (46%), Positives = 68/109 (62%)

Query:    71 KFSSEKSLRSRPIIRSGS-SDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLT 129
             K ++ K+  S P++   S S +  +T Q++E      K   + K   NRC  CR+KVGLT
Sbjct:   111 KVTTPKTEVSEPVVTQPSPSVSQPSTSQSEE------KAPELPKPKKNRCFMCRKKVGLT 164

Query:   130 GFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 178
             GF CRCG LFCG HRYSD+H+C YDYK+     I +ENPV+ A KI R+
Sbjct:   165 GFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213

GO:0060324 "face development" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

TAIR|locus:2049505 AT2G36320 [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 36/62 (58%), Positives = 50/62 (80%)

Query:   117 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIV 176
             NRC+ CR++VGLTGF CRCG  FCG HRY + H C++D+KSAGR+ IA+ NP++ AAK+ 
Sbjct:   100 NRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQ 159

Query:   177 RV 178
             ++
Sbjct:   160 KI 161

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LHJ8	SAP5_ARATH	No assigned EC number	0.5561	0.8483	0.9437	yes	no
Q84PD8	SAP11_ORYSJ	No assigned EC number	0.4946	0.8988	0.9411	yes	no
Q5R7S6	ZFAN6_PONAB	No assigned EC number	0.3209	0.9606	0.8221	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	178
smart00154	39	smart00154, ZnF_AN1, AN1-like Zinc finger	4e-13
pfam01428	43	pfam01428, zf-AN1, AN1-like Zinc finger	5e-10
pfam01754	25	pfam01754, zf-A20, A20-like zinc finger	1e-06
smart00259	26	smart00259, ZnF_A20, A20-like zinc fingers	0.001

>gnl|CDD|197545 smart00154, ZnF_AN1, AN1-like Zinc finger

 Score = 60.1 bits (146), Expect = 4e-13
 Identities = 27/39 (69%), Positives = 30/39 (76%), Gaps = 1/39 (2%)

Query: 119 CSGCRRKVGLTGFRCR-CGELFCGEHRYSDRHDCSYDYK 156
           C  CR+KVGLTGF+CR CG LFCGEHR  + HDC  DYK
Sbjct: 1   CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK 39

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. Length = 39

>gnl|CDD|201791 pfam01428, zf-AN1, AN1-like Zinc finger

 Score = 52.1 bits (125), Expect = 5e-10
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 4/44 (9%)

Query: 119 CS--GCRRKVGLTGFRCR-CGELFCGEHRYSDRHDCSYDYKSAG 159
           CS  GC++K  L  F+CR CG  FC +HR  + H+C   YKS  
Sbjct: 1   CSFKGCKKKDFL-PFKCRFCGGTFCLKHRLPEDHNCPGLYKSKA 43

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Length = 43

>gnl|CDD|201955 pfam01754, zf-A20, A20-like zinc finger

 Score = 42.6 bits (101), Expect = 1e-06
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 20 LCVNNCGFTGNPATNNMCQKCFN 42
           C   CGF G+PAT  +C KC+ 
Sbjct: 3  KCTPGCGFYGSPATEGLCSKCYR 25

The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding Domain. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. Length = 25

>gnl|CDD|128555 smart00259, ZnF_A20, A20-like zinc fingers

 Score = 34.5 bits (80), Expect = 0.001
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)

Query: 20 LCV-NNCGFTGNPATNNMCQKCFN 42
           C    CGF GNPAT  +C KCF 
Sbjct: 3  KCRRPGCGFFGNPATEGLCSKCFK 26

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation. Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	178
KOG3173	167	consensus Predicted Zn-finger protein [General fun	100.0
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	99.54
PF01754	25	zf-A20: A20-like zinc finger; InterPro: IPR002653	99.49
smart00259	26	ZnF_A20 A20-like zinc fingers. A20- (an inhibitor	99.43
PF01428	43	zf-AN1: AN1-like Zinc finger; InterPro: IPR000058	99.08
COG3582	162	Predicted nucleic acid binding protein containing	96.82
KOG3183	250	consensus Predicted Zn-finger protein [General fun	96.47
PF01363	69	FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f	94.66
KOG3183	250	consensus Predicted Zn-finger protein [General fun	93.39
cd00065	57	FYVE FYVE domain; Zinc-binding domain; targets pro	92.65
smart00064	68	FYVE Protein present in Fab1, YOTB, Vac1, and EEA1	91.99
KOG1818	634	consensus Membrane trafficking and cell signaling	89.75
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	85.71
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	83.94

>KOG3173 consensus Predicted Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.2e-45  Score=300.68  Aligned_cols=164  Identities=39%  Similarity=0.757  Sum_probs=107.6

Q ss_pred             CCccccccccccCCCcccccccccCCCcCCccCCCchhhhhhhhhhhhccc-ccCC-CCCCCCCCCCCcccccccccccc
Q 030404            1 MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASA-VAGS-STGGGGGGGSGVAIIKFSSEKSL   78 (178)
Q Consensus         1 Ma~~~~~~~pe~~~p~~~~lC~ngCGFfGs~at~n~CSkCyr~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~   78 (178)
                      |+++.....+.   ++.+.||.|||||||+|+|+||||+||++++.++++. ...+ .+...+. ++   ...+..+...
T Consensus         1 M~~e~~~~~~~---~~~~~lc~~gCGf~G~p~~~n~CSkC~~e~~~~~~~~~~~~~~~~~~~~~-~~---~s~~~~~~~~   73 (167)
T KOG3173|consen    1 MASETNGSQTP---PSQDLLCVNGCGFYGSPATENLCSKCYRDHLLRQQQKQARASPPVESSLS-SP---RSVPSRDPPA   73 (167)
T ss_pred             CcccccCCCCC---CccccccccCccccCChhhccHHHHHHHHHHHHhhhccccccCccccccc-Cc---cccCcccccc
Confidence            77765553322   2245899999999999999999999999999877665 2211 1111100 00   0001000000


Q ss_pred             ccccccccCCCC-CCCCCCcccchhhhhhhhhhhccccCCccccccccccccceeeecCccccccCCCCCCCCCCccchH
Q 030404           79 RSRPIIRSGSSD-AAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKS  157 (178)
Q Consensus        79 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~  157 (178)
                        .........+ ......   +..  ...........++||+.|+|||||+||.||||++||+.|||||.|+|+||||.
T Consensus        74 --~~~~~~~~~~~~~~~~~---~s~--~~~~~~~~~~~~~rC~~C~kk~gltgf~CrCG~~fC~~HRy~e~H~C~fDyK~  146 (167)
T KOG3173|consen   74 --VSLESTTESELKLVSDT---PST--EEEDEESKPKKKKRCFKCRKKVGLTGFKCRCGNTFCGTHRYPEQHDCSFDYKQ  146 (167)
T ss_pred             --ccccccccccccccccC---Ccc--cccccccccccchhhhhhhhhhcccccccccCCcccccccCCccccccccHHH
Confidence              0000000000 000000   000  01112233456789999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHhCCcccccccccC
Q 030404          158 AGRDAIARENPVIKAAKIVRV  178 (178)
Q Consensus       158 ~~r~~l~k~NP~v~~~Kl~ki  178 (178)
                      +||+.|+++||+|+++||.||
T Consensus       147 ~gr~~i~k~nP~v~a~k~~ki  167 (167)
T KOG3173|consen  147 AGREKIAKANPVVKADKLQKI  167 (167)
T ss_pred             HHHHHHHHhCCeeeccccccC
Confidence            999999999999999999998

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=99.54  E-value=2.3e-15  Score=96.52  Aligned_cols=38  Identities=71%  Similarity=1.547  Sum_probs=36.8

Q ss_pred             cccccccccccceeee-cCccccccCCCCCCCCCCccch
Q 030404          119 CSGCRRKVGLTGFRCR-CGELFCGEHRYSDRHDCSYDYK  156 (178)
Q Consensus       119 C~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  156 (178)
                      |+.|+++++|++|+|+ |+++||..|||||.|+|++|||
T Consensus         1 C~~C~~~~~l~~f~C~~C~~~FC~~HR~~e~H~C~~~~k   39 (39)
T smart00154        1 CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK   39 (39)
T ss_pred             CcccCCcccccCeECCccCCccccccCCccccCCccccC
Confidence            7899999999999999 9999999999999999999996

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>PF01754 zf-A20: A20-like zinc finger; InterPro: IPR002653 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.49  E-value=9.4e-15  Score=85.97  Aligned_cols=24  Identities=58%  Similarity=1.432  Sum_probs=20.2

Q ss_pred             ccccccCCCcCCccCCCchhhhhh
Q 030404           19 TLCVNNCGFTGNPATNNMCQKCFN   42 (178)
Q Consensus        19 ~lC~ngCGFfGs~at~n~CSkCyr   42 (178)
                      .+|++|||||||++|+||||+|||
T Consensus         2 ~~C~~gCgf~Gs~~~~~~Cs~C~~   25 (25)
T PF01754_consen    2 SLCANGCGFYGSPATNGLCSKCYR   25 (25)
T ss_dssp             SB-TTTSSSB-BGGGTTS-HHHHH
T ss_pred             CcccCCCCCcccccccCcchhhcC
Confidence            789999999999999999999997

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the zinc finger domain found in A20. A20 is an inhibitor of cell death that inhibits NF-kappaB activation via the tumour necrosis factor receptor associated factor pathway []. The zinc finger domains appear to mediate self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding, 0008270 zinc ion binding; PDB: 2FIF_F 2FID_B 2C7N_C 2C7M_A 2L00_A 2KZY_A 2EQG_A 2EQE_A 3OJ3_J 3OJ4_C ....

>smart00259 ZnF_A20 A20-like zinc fingers

Probab=99.43  E-value=3.3e-14  Score=84.31  Aligned_cols=24  Identities=54%  Similarity=1.254  Sum_probs=23.0

Q ss_pred             cccc-ccCCCcCCccCCCchhhhhh
Q 030404           19 TLCV-NNCGFTGNPATNNMCQKCFN   42 (178)
Q Consensus        19 ~lC~-ngCGFfGs~at~n~CSkCyr   42 (178)
                      ++|. +||||||||+|+||||||||
T Consensus         2 ~~C~~~~CgF~G~~~t~~~CskCy~   26 (26)
T smart00259        2 IKCRRPGCGFFGNPATEGLCSKCFK   26 (26)
T ss_pred             CccccCCCCCcCChhhcccCHhhcC
Confidence            6899 99999999999999999996

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation.

>PF01428 zf-AN1: AN1-like Zinc finger; InterPro: IPR000058 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.08  E-value=3.4e-11  Score=78.07  Aligned_cols=38  Identities=42%  Similarity=0.919  Sum_probs=28.0

Q ss_pred             ccc--ccccccccceeee-cCccccccCCCCCCCCCCccchH
Q 030404          119 CSG--CRRKVGLTGFRCR-CGELFCGEHRYSDRHDCSYDYKS  157 (178)
Q Consensus       119 C~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  157 (178)
                      |..  |++++. ++|.|+ |+..||..||||+.|+|+++++.
T Consensus         1 C~~~~C~~~~~-~~~~C~~C~~~FC~~Hr~~e~H~C~~~~~~   41 (43)
T PF01428_consen    1 CSFPGCKKKDF-LPFKCKHCGKSFCLKHRLPEDHNCSKLQKK   41 (43)
T ss_dssp             -SSTTT--BCT-SHEE-TTTS-EE-TTTHSTTTCT-SSTTSC
T ss_pred             CccCcCcCccC-CCeECCCCCcccCccccCccccCCcchhhc
Confidence            444  998887 789999 99999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the AN1-type zinc finger domain, which has a dimetal (zinc)-bound alpha/beta fold. This domain was first identified as a zinc finger at the C terminus of AN1 Q91889 from SWISSPROT, a ubiquitin-like protein in Xenopus laevis []. The AN1-type zinc finger contains six conserved cysteines and two histidines that could potentially coordinate 2 zinc atoms. Certain stress-associated proteins (SAP) contain AN1 domain, often in combination with A20 zinc finger domains (SAP8) or C2H2 domains (SAP16) []. For example, the human protein Znf216 has an A20 zinc-finger at the N terminus and an AN1 zinc-finger at the C terminus, acting to negatively regulate the NFkappaB activation pathway and to interact with components of the immune response like RIP, IKKgamma and TRAF6. The interact of Znf216 with IKK-gamma and RIP is mediated by the A20 zinc-finger domain, while its interaction with TRAF6 is mediated by the AN1 zinc-finger domain; therefore, both zinc-finger domains are involved in regulating the immune response []. The AN1 zinc finger domain is also found in proteins containing a ubiquitin-like domain, which are involved in the ubiquitination pathway []. Proteins containing an AN1-type zinc finger include: Ascidian posterior end mark 6 (pem-6) protein []. Human AWP1 protein (associated with PRK1), which is expressed during early embryogenesis []. Human immunoglobulin mu binding protein 2 (SMUBP-2), mutations in which cause muscular atrophy with respiratory distress type 1 []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1WFP_A 1WYS_A 1WG2_A 1WFH_A 1X4W_A 1WFE_A 1WFL_A 1X4V_A.

>COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]

Probab=96.82  E-value=0.00056  Score=56.32  Aligned_cols=38  Identities=29%  Similarity=0.565  Sum_probs=30.7

Q ss_pred             ccccccccccccceeee-cCccccccCCCCCCCCCCccch
Q 030404          118 RCSGCRRKVGLTGFRCR-CGELFCGEHRYSDRHDCSYDYK  156 (178)
Q Consensus       118 rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  156 (178)
                      +|..|++..+|. ++|- |++.||+.||+++.|+|.+...
T Consensus        99 ~~~~~g~~s~l~-~~c~~c~g~fc~~h~lp~nhdc~~L~s  137 (162)
T COG3582          99 TPQCTGKGSTLA-GKCNYCTGYFCAEHRLPENHDCNGLGS  137 (162)
T ss_pred             cceeccCCcccc-ccccCCCCcceeceecccccccccHHH
Confidence            444556655555 8997 9999999999999999998854

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=96.47  E-value=0.001  Score=57.92  Aligned_cols=40  Identities=33%  Similarity=0.890  Sum_probs=34.8

Q ss_pred             Cccc--cccccccccceeee-cCccccccCCCCCCCCCCccchH
Q 030404          117 NRCS--GCRRKVGLTGFRCR-CGELFCGEHRYSDRHDCSYDYKS  157 (178)
Q Consensus       117 ~rC~--~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  157 (178)
                      ..|.  .|+ ++.++.|+|- |+.+||..||-.+.|.|.+.|..
T Consensus         9 kHCs~~~Ck-qlDFLPf~Cd~C~~~FC~eHrsye~H~Cp~~~~~   51 (250)
T KOG3183|consen    9 KHCSVPYCK-QLDFLPFKCDGCSGIFCLEHRSYESHHCPKGLRI   51 (250)
T ss_pred             cccCcchhh-hccccceeeCCccchhhhccchHhhcCCCccccc
Confidence            4677  776 6778999996 99999999999999999998764

>PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.66  E-value=0.019  Score=39.48  Aligned_cols=29  Identities=31%  Similarity=0.811  Sum_probs=17.5

Q ss_pred             cCCcccccccccccc--ceeee-cCccccccC
Q 030404          115 VVNRCSGCRRKVGLT--GFRCR-CGELFCGEH  143 (178)
Q Consensus       115 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  143 (178)
                      ....|..|+++.+|+  -..|| ||.+||+.+
T Consensus         8 ~~~~C~~C~~~F~~~~rrhhCr~CG~~vC~~C   39 (69)
T PF01363_consen    8 EASNCMICGKKFSLFRRRHHCRNCGRVVCSSC   39 (69)
T ss_dssp             G-SB-TTT--B-BSSS-EEE-TTT--EEECCC
T ss_pred             CCCcCcCcCCcCCCceeeEccCCCCCEECCch
Confidence            357999999999996  49999 999999754

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The FYVE zinc finger is named after four proteins that it has been found in: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two zinc ions []. The FYVE finger has eight potential zinc coordinating cysteine positions. Many members of this family also include two histidines in a motif R+HHC+XCG, where + represents a charged residue and X any residue. FYVE-type domains are divided into two known classes: FYVE domains that specifically bind to phosphatidylinositol 3-phosphate in lipid bilayers and FYVE-related domains of undetermined function []. Those that bind to phosphatidylinositol 3-phosphate are often found in proteins targeted to lipid membranes that are involved in regulating membrane traffic [, , ]. Most FYVE domains target proteins to endosomes by binding specifically to phosphatidylinositol-3-phosphate at the membrane surface. By contrast, the CARP2 FYVE-like domain is not optimized to bind to phosphoinositides or insert into lipid bilayers. FYVE domains are distinguished from other zinc fingers by three signature sequences: an N-terminal WxxD motif, a basic R(R/K)HHCR patch, and a C-terminal RVC motif. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0046872 metal ion binding; PDB: 1HYI_A 1JOC_B 1HYJ_A 1DVP_A 3ZYQ_A 4AVX_A 1VFY_A 3T7L_A 1X4U_A 1WFK_A ....

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=93.39  E-value=0.018  Score=50.34  Aligned_cols=41  Identities=34%  Similarity=0.867  Sum_probs=34.5

Q ss_pred             ccccCCccc--ccccccccc-ceeee-cCccccccCCCCCCCCCC
Q 030404          112 EKRVVNRCS--GCRRKVGLT-GFRCR-CGELFCGEHRYSDRHDCS  152 (178)
Q Consensus       112 ~~~~~~rC~--~C~kkvgl~-gf~Cr-Cg~~FC~~HRy~e~H~C~  152 (178)
                      .+...++|.  .|++++-+. .+.|+ ||..||-+||++-.|.|.
T Consensus        94 ~k~~t~kc~~~~c~k~~~~~~~~~c~~c~~~~c~khr~~~dhsc~  138 (250)
T KOG3183|consen   94 RKVFTNKCPVPRCKKTLTLANKITCSKCGRNFCLKHRHPLDHSCN  138 (250)
T ss_pred             cccccccCCchhhHHHHHHHHhhhhHhhcchhhhhccCCCCchhh
Confidence            345567776  688888775 69998 999999999999999998

>cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1;

Probab=92.65  E-value=0.052  Score=35.74  Aligned_cols=27  Identities=41%  Similarity=1.126  Sum_probs=23.5

Q ss_pred             Ccccccccccccc--ceeee-cCccccccC
Q 030404          117 NRCSGCRRKVGLT--GFRCR-CGELFCGEH  143 (178)
Q Consensus       117 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  143 (178)
                      ..|..|+++.++.  ...|| ||.+||+.+
T Consensus         3 ~~C~~C~~~F~~~~rk~~Cr~Cg~~~C~~C   32 (57)
T cd00065           3 SSCMGCGKPFTLTRRRHHCRNCGRIFCSKC   32 (57)
T ss_pred             CcCcccCccccCCccccccCcCcCCcChHH
Confidence            5799999999996  69998 999999854

>smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1

Probab=91.99  E-value=0.078  Score=36.26  Aligned_cols=29  Identities=41%  Similarity=1.129  Sum_probs=24.3

Q ss_pred             CCcccccccccccc--ceeee-cCccccccCC
Q 030404          116 VNRCSGCRRKVGLT--GFRCR-CGELFCGEHR  144 (178)
Q Consensus       116 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  144 (178)
                      ...|..|+++.+++  ...|| ||.+||+.+-
T Consensus        10 ~~~C~~C~~~F~~~~rk~hCr~CG~i~C~~C~   41 (68)
T smart00064       10 VSNCMGCGKEFNLTKRRHHCRNCGRIFCSKCS   41 (68)
T ss_pred             CCcCcccCccccCcccccccccCCCCcChHHc
Confidence            46899999999986  58898 9999997543

The FYVE zinc finger is named after four proteins where it was first found: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two Zn2+ ions. The FYVE finger has eight potential zinc coordinating cysteine positions. The FYVE finger is structurally related to the

>KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=89.75  E-value=0.13  Score=50.33  Aligned_cols=47  Identities=36%  Similarity=0.756  Sum_probs=36.4

Q ss_pred             ccCCccccccccccccc--eeee-cCccccccCC-----------CCCCCCCCccchHhhH
Q 030404          114 RVVNRCSGCRRKVGLTG--FRCR-CGELFCGEHR-----------YSDRHDCSYDYKSAGR  160 (178)
Q Consensus       114 ~~~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~HR-----------y~e~H~C~fDyk~~~r  160 (178)
                      .....|..|+.+.|+++  ..|| ||.+||+.|=           |-+.--|..||...-|
T Consensus       163 ~D~~~C~rCr~~F~~~~rkHHCr~CG~vFC~qcss~s~~lP~~Gi~~~VRVCd~C~E~l~~  223 (634)
T KOG1818|consen  163 IDSEECLRCRVKFGLTNRKHHCRNCGQVFCGQCSSKSLTLPKLGIEKPVRVCDSCYELLTR  223 (634)
T ss_pred             ccccccceeeeeeeeccccccccccchhhccCccccccCcccccccccceehhhhHHHhhh
Confidence            34679999999999985  8999 9999999874           3455667777764433

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=85.71  E-value=0.41  Score=28.18  Aligned_cols=22  Identities=32%  Similarity=0.690  Sum_probs=19.8

Q ss_pred             ccccccccccccceeee-cCccc
Q 030404          118 RCSGCRRKVGLTGFRCR-CGELF  139 (178)
Q Consensus       118 rC~~C~kkvgl~gf~Cr-Cg~~F  139 (178)
                      +|-.|++.|.+.--.|- ||+.|
T Consensus         2 ~CP~C~~~V~~~~~~Cp~CG~~F   24 (26)
T PF10571_consen    2 TCPECGAEVPESAKFCPHCGYDF   24 (26)
T ss_pred             cCCCCcCCchhhcCcCCCCCCCC
Confidence            68999999999989997 99887

Several members are annotated as putative helicases.

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=83.94  E-value=0.63  Score=30.18  Aligned_cols=24  Identities=33%  Similarity=0.919  Sum_probs=18.6

Q ss_pred             cCCccccccccc---cccceeee-cCcc
Q 030404          115 VVNRCSGCRRKV---GLTGFRCR-CGEL  138 (178)
Q Consensus       115 ~~~rC~~C~kkv---gl~gf~Cr-Cg~~  138 (178)
                      .+..|..|++.+   ++.|++|+ |+.+
T Consensus        10 ~~~~C~~C~~~i~g~~~~g~~C~~C~~~   37 (53)
T PF00130_consen   10 KPTYCDVCGKFIWGLGKQGYRCSWCGLV   37 (53)
T ss_dssp             STEB-TTSSSBECSSSSCEEEETTTT-E
T ss_pred             CCCCCcccCcccCCCCCCeEEECCCCCh
Confidence            567999999999   56799998 8765

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	178
1wfl_A	74	Solution Structure Of The Zf-An1 Domain From Mouse		5e-15
1wfh_A	64	Solution Structrue Of The Zf-An1 Domain From Arabid		3e-12
1wff_A	85	Solution Structure Of The Zf-An1 Domain From Mouse		5e-12
1wg2_A	64	Solution Structure Of Zf-An1 Domain From Arabidopsi		3e-11
1wfp_A	74	Solution Structure Of The Zf-an1 Domain From Arabio		4e-11

>pdb|1WFL|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Zinc Finger Protein 216 Length = 74

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 39/52 (75%)
Query: 106 EKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKS 157
           EK   + K   NRC  CR+KVGLTGF CRCG LFCG HRYSD+H+C YDYK+
Sbjct: 15  EKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKA 66

>pdb|1WFH|A Chain A, Solution Structrue Of The Zf-An1 Domain From Arabidopsis Thaliana At2g36320 Protein Length = 64

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 117 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAG 159
           NRC+ CR++VGLTGF CRCG  FCG HRY + H C++D+KSAG
Sbjct: 16  NRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAG 58

>pdb|1WFF|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Riken Cdna 2810002d23 Protein Length = 85

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 111 VEKRVVNRCSGCRRKVGL-TGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPV 169
            +K+++  C  C +K GL T F CRCG  FC  HRY++ H C+YDYKSAGR  +   NPV
Sbjct: 20  TKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPV 79

>pdb|1WG2|A Chain A, Solution Structure Of Zf-An1 Domain From Arabidopsis Thaliana Length = 64

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 114 RVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAG 159
           R  NRC  C +KVG+ GF+C+CG  FCG HRY ++H+CS+D+K  G
Sbjct: 13  RPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVG 58

>pdb|1WFP|A Chain A, Solution Structure Of The Zf-an1 Domain From Arabiopsis Thaliana F5o11.17 Protein Length = 74

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 110 NVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYK 156
           +  K    RC  C +KVG+TGF+CRCG  FCG HRY + H+C +D+K
Sbjct: 19  DPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFK 65

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	178
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	2e-29
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	1e-26
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	8e-26
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	2e-25
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	2e-23
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	2e-21
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	5e-08
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	5e-08
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	3e-04
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	4e-04

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 85

 Score =  103 bits (257), Expect = 2e-29
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 111 VEKRVVNRCSGCRRKVGL-TGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPV 169
            +K+++  C  C +K GL T F CRCG  FC  HRY++ H C+YDYKSAGR  +   NPV
Sbjct: 20  TKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPV 79

Query: 170 IKAA 173
              +
Sbjct: 80  SGPS 83

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 74

 Score = 95.4 bits (237), Expect = 1e-26
 Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 87  GSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYS 146
           GSS ++GT G      D      +  K    RC  C +KVG+TGF+CRCG  FCG HRY 
Sbjct: 1   GSSGSSGTRG-----GDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYP 55

Query: 147 DRHDCSYDYKSAGRDAIA 164
           + H+C +D+K       +
Sbjct: 56  ESHECQFDFKGVASGPSS 73

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 93.0 bits (231), Expect = 8e-26
 Identities = 25/59 (42%), Positives = 36/59 (61%)

Query: 106 EKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIA 164
               +   R  NRC  C +KVG+ GF+C+CG  FCG HRY ++H+CS+D+K  G    +
Sbjct: 5   SSGPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPSS 63

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 92.2 bits (229), Expect = 2e-25
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 112 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIA 164
             +  NRC+ CR++VGLTGF CRCG  FCG HRY + H C++D+KSAG    +
Sbjct: 11  PPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS 63

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 74

 Score = 87.3 bits (216), Expect = 2e-23
 Identities = 34/73 (46%), Positives = 42/73 (57%)

Query: 92  AGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDC 151
             +       +   EK   + K   NRC  CR+KVGLTGF CRCG LFCG HRYSD+H+C
Sbjct: 1   GSSGSSGPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNC 60

Query: 152 SYDYKSAGRDAIA 164
            YDYK+      +
Sbjct: 61  PYDYKAEASGPSS 73

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 67

 Score = 81.6 bits (201), Expect = 2e-21
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 103 DRREKEANVEKRVVNRCSGCRRKVGLTGFR---CRCGELFCGEHRYSDRHDCSYDYKSAG 159
                 +  +++   RC  C+ K+ L       CRCG +FC  HR  ++HDC++D+   G
Sbjct: 2   SSGSSGSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRG 61

Query: 160 RDAIA 164
               +
Sbjct: 62  SGPSS 66

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A Length = 62

 Score = 47.0 bits (111), Expect = 5e-08
 Identities = 18/57 (31%), Positives = 21/57 (36%)

Query: 9  ETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASAVAGSSTGGGGGGGS 65
            E        LC   CGF GNP TN MC  C+        ++   S  G   G  S
Sbjct: 4  AQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNS 60

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B Length = 74

 Score = 47.2 bits (111), Expect = 5e-08
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 5  TEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCF 41
           + E     V ++  LC   CG+ GNPA    C KC+
Sbjct: 3  LKSERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCW 39

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 63

 Score = 36.9 bits (85), Expect = 3e-04
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 112 EKRVVNRCS--GCRRKVGLTGFRCR-CGELFCGEHRYSDRHDCSYDYKSAGR 160
            K   N+C   GCR++  +    C  C   FC +HR+   HDCS +      
Sbjct: 8   RKIFTNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCSGEGHPTSS 58

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 86

 Score = 37.1 bits (85), Expect = 4e-04
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 103 DRREKEANVEKRVVNRCS--GCRRKVGLTGFRC-RCGELFCGEHRYSDRHDCSYDYKSAG 159
           +  ++    ++     CS  GC     L    C  C + FC  HR+   HDC     +  
Sbjct: 12  NVVKERPKTDEHKSYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKLEVAKP 70

Query: 160 RDAIARE 166
           R A  ++
Sbjct: 71  RMAATQK 77

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	178
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	99.95
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.92
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	99.91
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	99.9
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.9
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	99.9
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	99.72
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	99.64
3oj3_I	49	Tumor necrosis factor alpha-induced protein 3; ubi	99.53
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.32
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	99.28
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.23
2eqe_A	48	Tumor necrosis factor, alpha-induced protein 3; ZF	97.68
1vfy_A	73	Phosphatidylinositol-3-phosphate binding FYVE doma	94.4
2yw8_A	82	RUN and FYVE domain-containing protein 1; structur	93.81
1wfk_A	88	Zinc finger, FYVE domain containing 19; riken stru	93.45
1joc_A	125	EEA1, early endosomal autoantigen 1; FYVE domain,	93.45
1x4u_A	84	Zinc finger, FYVE domain containing 27 isoform B;	93.4
1z2q_A	84	LM5-1; membrane protein, FYVE domain, zinc-finger;	93.2
1dvp_A	220	HRS, hepatocyte growth factor-regulated tyrosine k	92.48
3t7l_A	90	Zinc finger FYVE domain-containing protein 16; str	91.98
3zyq_A	226	Hepatocyte growth factor-regulated tyrosine kinas	91.31
1y02_A	120	CARP2, FYVE-ring finger protein sakura; zinc-bindi	90.72
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	83.95
4b6d_A	61	RAC GTPase-activating protein 1; signaling protein	82.07
3mpx_A	434	FYVE, rhogef and PH domain-containing protein 5; s	81.19

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.95  E-value=2e-30  Score=190.39  Aligned_cols=61  Identities=48%  Similarity=1.074  Sum_probs=58.4

Q ss_pred             cccCCcccccccccccc-ceeeecCccccccCCCCCCCCCCccchHhhHHHHHHhCCccccc
Q 030404          113 KRVVNRCSGCRRKVGLT-GFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAA  173 (178)
Q Consensus       113 ~~~~~rC~~C~kkvgl~-gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~NP~v~~~  173 (178)
                      +..++||+.|+|||||+ +|+||||++||+.|||||+|+|+||||++||++|+|+||+|+++
T Consensus        22 k~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~   83 (85)
T 1wff_A           22 KKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             cccCccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence            55689999999999995 99999999999999999999999999999999999999999986

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.92  E-value=2e-27  Score=166.29  Aligned_cols=53  Identities=53%  Similarity=1.197  Sum_probs=50.1

Q ss_pred             ccccCCccccccccccccceeeecCccccccCCCCCCCCCCccchHhhHHHHH
Q 030404          112 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIA  164 (178)
Q Consensus       112 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~  164 (178)
                      ++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus        11 ~k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~   63 (64)
T 1wfh_A           11 PPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS   63 (64)
T ss_dssp             CCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred             CCCcCCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence            35678999999999999999999999999999999999999999999999875

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.91  E-value=1.5e-26  Score=161.89  Aligned_cols=51  Identities=49%  Similarity=1.230  Sum_probs=48.6

Q ss_pred             cccCCccccccccccccceeeecCccccccCCCCCCCCCCccchHhhHHHH
Q 030404          113 KRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAI  163 (178)
Q Consensus       113 ~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  163 (178)
                      +..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus        12 ~~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~   62 (64)
T 1wg2_A           12 VRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS   62 (64)
T ss_dssp             SCCSCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred             CCcCCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence            456899999999999999999999999999999999999999999999876

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.90  E-value=4.4e-25  Score=158.33  Aligned_cols=51  Identities=63%  Similarity=1.299  Sum_probs=47.7

Q ss_pred             ccccCCccccccccccccceeeecCccccccCCCCCCCCCCccchHhhHHH
Q 030404          112 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDA  162 (178)
Q Consensus       112 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~  162 (178)
                      .+..++||+.|+|||||++|.||||++||+.|||+|+|+|+||||++||++
T Consensus        21 ~k~~~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~   71 (74)
T 1wfl_A           21 PKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP   71 (74)
T ss_dssp             CCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred             CCCcCCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence            345689999999999999999999999999999999999999999999874

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.90  E-value=1.2e-25  Score=161.25  Aligned_cols=52  Identities=46%  Similarity=1.174  Sum_probs=49.0

Q ss_pred             ccccCCccccccccccccceeeecCccccccCCCCCCCCCCccchHhhHHHH
Q 030404          112 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAI  163 (178)
Q Consensus       112 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  163 (178)
                      ++..++||+.|+|+|||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus        21 ~k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~   72 (74)
T 1wfp_A           21 PKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS   72 (74)
T ss_dssp             TTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred             CcccCccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence            3567899999999999999999999999999999999999999999999876

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.90  E-value=8.8e-26  Score=159.34  Aligned_cols=52  Identities=35%  Similarity=0.803  Sum_probs=48.2

Q ss_pred             ccccCCccccccccccccc---eeeecCccccccCCCCCCCCCCccchHhhHHHH
Q 030404          112 EKRVVNRCSGCRRKVGLTG---FRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAI  163 (178)
Q Consensus       112 ~~~~~~rC~~C~kkvgl~g---f~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  163 (178)
                      +++.++||+.|+|||||++   |+||||++||+.|||||+|+|+||||++||+.|
T Consensus        11 ~~~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~   65 (67)
T 1x4w_A           11 KQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS   65 (67)
T ss_dssp             SCSCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred             CCccCCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence            3567899999999999995   999999999999999999999999999999765

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A

Probab=99.72  E-value=2.9e-18  Score=119.18  Aligned_cols=44  Identities=43%  Similarity=0.878  Sum_probs=36.4

Q ss_pred             CCccccccccccCCCcccccccccCCCcCCccCCCchhhhhhhhhhhhccc
Q 030404            1 MAQKTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNATATTTASA   51 (178)
Q Consensus         1 Ma~~~~~~~pe~~~p~~~~lC~ngCGFfGs~at~n~CSkCyr~~~~~~~~~   51 (178)
                      |++++.  +++  +|   +||+|||||||||+|+||||||||+++.+++++
T Consensus         3 M~~e~~--~~~--~~---~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~   46 (62)
T 2kzy_A            3 MAQETN--QTP--GP---MLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS   46 (62)
T ss_dssp             CCCCCC--CCS--CC---CBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHH
T ss_pred             hhhccc--CCC--cc---cchhhCCCCcCChhhcCcCHHHHHHHHHhhhcc
Confidence            886654  344  56   899999999999999999999999998765554

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B

Probab=99.64  E-value=4.2e-17  Score=116.59  Aligned_cols=31  Identities=35%  Similarity=0.849  Sum_probs=26.8

Q ss_pred             cccccccCCCcCCccCCCchhhhhhhhhhhh
Q 030404           18 LTLCVNNCGFTGNPATNNMCQKCFNATATTT   48 (178)
Q Consensus        18 ~~lC~ngCGFfGs~at~n~CSkCyr~~~~~~   48 (178)
                      ++||+|||||||||+|+||||||||+...+.
T Consensus        16 ~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k~   46 (74)
T 2c7n_A           16 DLLCKKGCGYYGNPAWQGFCSKCWREEYHKA   46 (74)
T ss_dssp             --CCTTCSSSCCCGGGTTCCHHHHHHHHHHH
T ss_pred             chhHHhCCCCCCChhhcCccHHHHHHHHHHH
Confidence            3899999999999999999999999986543

>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C

Probab=99.53  E-value=2e-15  Score=100.16  Aligned_cols=28  Identities=25%  Similarity=0.721  Sum_probs=26.6

Q ss_pred             cccc-ccCCCcCCccCCCchhhhhhhhhh
Q 030404           19 TLCV-NNCGFTGNPATNNMCQKCFNATAT   46 (178)
Q Consensus        19 ~lC~-ngCGFfGs~at~n~CSkCyr~~~~   46 (178)
                      .||+ |||||||||+|+|||||||||+..
T Consensus        19 ~lC~~ngCGFfG~p~t~n~CSkCyre~~e   47 (49)
T 3oj3_I           19 SKCRKAGCVYFGTPENKGFCTLCFIEYRE   47 (49)
T ss_dssp             CBCSSTTCSSBCBGGGTTBCHHHHHHHHH
T ss_pred             cccccCCCCCccCcccCCcchHHHHHHHH
Confidence            7999 999999999999999999999865

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.32  E-value=2.1e-13  Score=99.96  Aligned_cols=58  Identities=24%  Similarity=0.437  Sum_probs=48.4

Q ss_pred             cccCCcccc--ccccccccceeee-cCccccccCCCCCCCCCCccchHhhHHHHHHhCCcccccccccC
Q 030404          113 KRVVNRCSG--CRRKVGLTGFRCR-CGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV  178 (178)
Q Consensus       113 ~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~NP~v~~~Kl~ki  178 (178)
                      +..++||..  |+++ +|++|.|+ |+.+||..|||+++|+|+..       .+.+.++...+.++.+|
T Consensus        22 ~~~~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~~~   82 (86)
T 1wfe_A           22 EHKSYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVRSG   82 (86)
T ss_dssp             CSCCEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSSCS
T ss_pred             CCCCCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHHHH
Confidence            445789999  9998 78999999 99999999999999999975       34667777777776655

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.28  E-value=7.4e-13  Score=92.18  Aligned_cols=40  Identities=38%  Similarity=0.850  Sum_probs=36.7

Q ss_pred             cccCCcccc--ccccccccceeee-cCccccccCCCCCCCCCCc
Q 030404          113 KRVVNRCSG--CRRKVGLTGFRCR-CGELFCGEHRYSDRHDCSY  153 (178)
Q Consensus       113 ~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f  153 (178)
                      +...+||..  |+++ +|++|.|+ |+.+||..|||+|+|+|+-
T Consensus         9 k~~~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~~   51 (63)
T 1x4v_A            9 KIFTNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCSG   51 (63)
T ss_dssp             CTTCCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred             cccCCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCCC
Confidence            456799999  9998 89999999 9999999999999999973

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.23  E-value=1.5e-12  Score=93.35  Aligned_cols=42  Identities=36%  Similarity=0.797  Sum_probs=38.6

Q ss_pred             cCCcccc--ccccccccceeee-cCccccccCCCCCCCCCCccchH
Q 030404          115 VVNRCSG--CRRKVGLTGFRCR-CGELFCGEHRYSDRHDCSYDYKS  157 (178)
Q Consensus       115 ~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  157 (178)
                      ..+||..  |+++ ++++|+|+ |+.+||..|||++.|+|+++++.
T Consensus        13 ~g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~~   57 (75)
T 1wys_A           13 IGQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNVV   57 (75)
T ss_dssp             CCCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSSC
T ss_pred             cCCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCccc
Confidence            3689998  9987 79999999 99999999999999999999873

>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=97.68  E-value=1.8e-05  Score=51.91  Aligned_cols=28  Identities=25%  Similarity=0.730  Sum_probs=25.8

Q ss_pred             cccc-ccCCCcCCccCCCchhhhhhhhhh
Q 030404           19 TLCV-NNCGFTGNPATNNMCQKCFNATAT   46 (178)
Q Consensus        19 ~lC~-ngCGFfGs~at~n~CSkCyr~~~~   46 (178)
                      .+|. .||-|||+|.+.++|..||.++..
T Consensus        16 ~kCRk~GC~fFGTpen~GFCTlCf~eyre   44 (48)
T 2eqe_A           16 SKCRKAGCVYFGTPENKGFCTLCFIEYSG   44 (48)
T ss_dssp             SBCSSTTCCSBCCTTTTTCCHHHHHHHHS
T ss_pred             chhhhcCCCcccCcccCceeeeehhhhhc
Confidence            6894 999999999999999999999865

>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1

Probab=94.40  E-value=0.019  Score=39.62  Aligned_cols=27  Identities=44%  Similarity=1.102  Sum_probs=24.1

Q ss_pred             Ccccccccccccc--ceeee-cCccccccC
Q 030404          117 NRCSGCRRKVGLT--GFRCR-CGELFCGEH  143 (178)
Q Consensus       117 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  143 (178)
                      ..|..|+++.+++  -..|| ||.+||+.+
T Consensus        12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~C   41 (73)
T 1vfy_A           12 DACMICSKKFSLLNRKHHCRSCGGVFCQEH   41 (73)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred             CcccCCCCccCCccccccCCCCCEEEcccc
Confidence            5899999999987  49999 999999875

>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A

Probab=93.81  E-value=0.029  Score=39.46  Aligned_cols=28  Identities=29%  Similarity=1.030  Sum_probs=24.4

Q ss_pred             CCccccccccccccc--eeee-cCccccccC
Q 030404          116 VNRCSGCRRKVGLTG--FRCR-CGELFCGEH  143 (178)
Q Consensus       116 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  143 (178)
                      ...|..|+++.+++.  ..|| ||.+||+.+
T Consensus        19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   49 (82)
T 2yw8_A           19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC   49 (82)
T ss_dssp             CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred             CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence            468999999999874  8999 999999864

>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1

Probab=93.45  E-value=0.036  Score=39.77  Aligned_cols=29  Identities=38%  Similarity=0.984  Sum_probs=25.0

Q ss_pred             cCCccccccccccccc--eeee-cCccccccC
Q 030404          115 VVNRCSGCRRKVGLTG--FRCR-CGELFCGEH  143 (178)
Q Consensus       115 ~~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  143 (178)
                      ....|..|+++.+++.  ..|| ||.+||+.+
T Consensus         8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   39 (88)
T 1wfk_A            8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC   39 (88)
T ss_dssp             CCSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred             cCCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence            3468999999999874  8999 999999874

>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A

Probab=93.45  E-value=0.032  Score=42.33  Aligned_cols=28  Identities=39%  Similarity=1.051  Sum_probs=24.2

Q ss_pred             CCccccccccccccc--eeee-cCccccccC
Q 030404          116 VNRCSGCRRKVGLTG--FRCR-CGELFCGEH  143 (178)
Q Consensus       116 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  143 (178)
                      ...|..|+++.+++.  ..|| ||.+||+.+
T Consensus        69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C   99 (125)
T 1joc_A           69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC   99 (125)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence            468999999999864  8999 999999864

>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.40  E-value=0.042  Score=38.71  Aligned_cols=28  Identities=29%  Similarity=0.879  Sum_probs=24.5

Q ss_pred             CCccccccccccccc--eeee-cCccccccC
Q 030404          116 VNRCSGCRRKVGLTG--FRCR-CGELFCGEH  143 (178)
Q Consensus       116 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  143 (178)
                      ...|..|+++.+++.  -.|| ||.+||+..
T Consensus        14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   44 (84)
T 1x4u_A           14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC   44 (84)
T ss_dssp             CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred             CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence            468999999999874  8999 999999875

>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}

Probab=93.20  E-value=0.041  Score=38.86  Aligned_cols=28  Identities=36%  Similarity=0.910  Sum_probs=24.4

Q ss_pred             CCccccccccccccc--eeee-cCccccccC
Q 030404          116 VNRCSGCRRKVGLTG--FRCR-CGELFCGEH  143 (178)
Q Consensus       116 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  143 (178)
                      ...|..|+++.+++.  ..|| ||.+||+.+
T Consensus        21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   51 (84)
T 1z2q_A           21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDC   51 (84)
T ss_dssp             CCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred             CCCCcCcCCccccchhcccccCCCcEEChHH
Confidence            468999999999874  8999 999999864

>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1

Probab=92.48  E-value=0.05  Score=44.21  Aligned_cols=28  Identities=39%  Similarity=1.051  Sum_probs=24.5

Q ss_pred             CCccccccccccccc--eeee-cCccccccC
Q 030404          116 VNRCSGCRRKVGLTG--FRCR-CGELFCGEH  143 (178)
Q Consensus       116 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  143 (178)
                      ...|..|+++.+++.  ..|| ||.+||+.+
T Consensus       161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C  191 (220)
T 1dvp_A          161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC  191 (220)
T ss_dssp             CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred             CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence            369999999999874  9999 999999864

>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}

Probab=91.98  E-value=0.071  Score=38.18  Aligned_cols=28  Identities=39%  Similarity=1.028  Sum_probs=24.2

Q ss_pred             CCcccccccccccc--ceeee-cCccccccC
Q 030404          116 VNRCSGCRRKVGLT--GFRCR-CGELFCGEH  143 (178)
Q Consensus       116 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  143 (178)
                      ...|..|+++.+++  -..|| ||.+||+..
T Consensus        20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~C   50 (90)
T 3t7l_A           20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVC   50 (90)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCcCcCCCCcccchhhCccccCCCCEECCcc
Confidence            46899999999986  49999 999999763

>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*

Probab=91.31  E-value=0.09  Score=43.19  Aligned_cols=28  Identities=39%  Similarity=1.171  Sum_probs=24.5

Q ss_pred             CCcccccccccccc--ceeee-cCccccccC
Q 030404          116 VNRCSGCRRKVGLT--GFRCR-CGELFCGEH  143 (178)
Q Consensus       116 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  143 (178)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus       164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C  194 (226)
T 3zyq_A          164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKC  194 (226)
T ss_dssp             CSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred             CCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence            46899999999986  59999 999999864

>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1

Probab=90.72  E-value=0.093  Score=39.97  Aligned_cols=41  Identities=20%  Similarity=0.388  Sum_probs=28.7

Q ss_pred             CCcccccccccccc--ceeee-cCcccccc---CCCCCCCCCCccch
Q 030404          116 VNRCSGCRRKVGLT--GFRCR-CGELFCGE---HRYSDRHDCSYDYK  156 (178)
Q Consensus       116 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~---HRy~e~H~C~fDyk  156 (178)
                      ...|..|+++.+++  --.|| ||.+||+.   |+.+..--|..=|.
T Consensus        19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~   65 (120)
T 1y02_A           19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR   65 (120)
T ss_dssp             -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred             cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence            46899999999886  48999 99999875   46665556665554

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=83.95  E-value=0.44  Score=41.08  Aligned_cols=41  Identities=22%  Similarity=0.455  Sum_probs=27.5

Q ss_pred             cCCccccccccc-cc--cceeee-cCccccccCCCCCCCCCCccch
Q 030404          115 VVNRCSGCRRKV-GL--TGFRCR-CGELFCGEHRYSDRHDCSYDYK  156 (178)
Q Consensus       115 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  156 (178)
                      .+..|..|++.+ |+  .|++|| ||.++|..-.-.=. .|.-+.-
T Consensus       356 ~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~C~~~~~  400 (406)
T 2vrw_B          356 ETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-PCGRHGQ  400 (406)
T ss_dssp             SCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-CC-----
T ss_pred             CCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-CCCCCch
Confidence            578999999988 66  489999 99999976432212 3876643

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}

Probab=82.07  E-value=0.45  Score=31.89  Aligned_cols=24  Identities=21%  Similarity=0.783  Sum_probs=19.6

Q ss_pred             cCCccccccccccc--cceeee-cCcc
Q 030404          115 VVNRCSGCRRKVGL--TGFRCR-CGEL  138 (178)
Q Consensus       115 ~~~rC~~C~kkvgl--~gf~Cr-Cg~~  138 (178)
                      .+..|..|++++++  .|++|| |+.+
T Consensus        18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~~   44 (61)
T 4b6d_A           18 KPESCVPCGKRIKFGKLSLKCRDCRVV   44 (61)
T ss_dssp             SCEECTTTCCEECTTCEEEEESSSSCE
T ss_pred             CCcccccccCEEEEeeEeeECCCCCCe
Confidence            46799999999987  589999 8643

>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}

Probab=81.19  E-value=0.3  Score=42.25  Aligned_cols=28  Identities=32%  Similarity=0.830  Sum_probs=0.0

Q ss_pred             CCcccccccccccc--ceeee-cCccccccC
Q 030404          116 VNRCSGCRRKVGLT--GFRCR-CGELFCGEH  143 (178)
Q Consensus       116 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  143 (178)
                      ...|..|+++.+++  ...|| ||.+||+.+
T Consensus       375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~C  405 (434)
T 3mpx_A          375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNC  405 (434)
T ss_dssp             -------------------------------
T ss_pred             CCcCCCcCCCCCCcchhhhcccCcCEeehhh
Confidence            57899999999986  59999 999998653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	178
d1wffa_	85	g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog	2e-29
d1wfha_	64	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	5e-23
d1wfla_	74	g.80.1.1 (A:) Zinc finger A20 domain containing pr	2e-22
d1wfpa_	74	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	1e-21
d2c7na1	56	g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-b	3e-07
d1wfea_	86	g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mous	6e-04

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]} Length = 85

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  101 bits (254), Expect = 2e-29
 Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 106 EKEANVEKRVVNRCSGCRRKVGL-TGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIA 164
           +     +K+++  C  C +K GL T F CRCG  FC  HRY++ H C+YDYKSAGR  + 
Sbjct: 15  KAPLQTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLE 74

Query: 165 RENPVIKAA 173
             NPV   +
Sbjct: 75  EANPVSGPS 83

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 84.9 bits (210), Expect = 5e-23
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 112 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIA 164
             +  NRC+ CR++VGLTGF CRCG  FCG HRY + H C++D+KSAG    +
Sbjct: 11  PPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS 63

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 83.4 bits (206), Expect = 2e-22
 Identities = 39/74 (52%), Positives = 47/74 (63%), Gaps = 5/74 (6%)

Query: 87  GSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYS 146
           GSS ++G +    E     EK   + K   NRC  CR+KVGLTGF CRCG LFCG HRYS
Sbjct: 1   GSSGSSGPSSSQSE-----EKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYS 55

Query: 147 DRHDCSYDYKSAGR 160
           D+H+C YDYK+   
Sbjct: 56  DKHNCPYDYKAEAS 69

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 81.5 bits (201), Expect = 1e-21
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 87  GSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYS 146
           GSS ++GT G +              K    RC  C +KVG+TGF+CRCG  FCG HRY 
Sbjct: 1   GSSGSSGTRGGDSAAAPLDPP-----KSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYP 55

Query: 147 DRHDCSYDYKSAGRDAIA 164
           + H+C +D+K       +
Sbjct: 56  ESHECQFDFKGVASGPSS 73

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 3e-07
 Identities = 11/22 (50%), Positives = 13/22 (59%)

Query: 20 LCVNNCGFTGNPATNNMCQKCF 41
          LC   CG+ GNPA    C KC+
Sbjct: 1  LCKKGCGYYGNPAWQGFCSKCW 22

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 86

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.4 bits (81), Expect = 6e-04
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 87  GSSDAAGTTGQNQELTDRREKEANVEKRVVNRCS--GCRRKVGLTGFRC-RCGELFCGEH 143
           GSS ++G +    E+   +E+    E +    CS  GC     L    C  C + FC  H
Sbjct: 1   GSSGSSGCS----EVNVVKERPKTDEHKS-YSCSFKGCTDVE-LVAVICPYCEKNFCLRH 54

Query: 144 RYSDRHDCS 152
           R+   HDC 
Sbjct: 55  RHQSDHDCE 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	178
d1wffa_	85	ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus	99.93
d1wfha_	64	Zinc finger A20 and AN1 domains containing protein	99.91
d1wfla_	74	Zinc finger A20 domain containing protein 2 {Mouse	99.89
d1wfpa_	74	Zinc finger A20 and AN1 domains containing protein	99.88
d2c7na1	56	RabGEF1 (Rabex-5), ubiquitin-binding domain {Human	99.63
d1wfea_	86	AN1-type zinc finger protein 1 {Mouse (Mus musculu	98.13
d1wfka_	88	Zinc finger FYVE domain containing protein 19 {Mou	95.23
d1vfya_	67	vps27p protein {Baker's yeast (Saccharomyces cerev	94.13
d1joca1	64	Eea1 {Human (Homo sapiens) [TaxId: 9606]}	93.69
d1dvpa2	72	Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7	93.44
d1zbdb_	124	Effector domain of rabphilin-3a {Rat (Rattus norve	91.56
d1y02a2	51	Rififylin (FYVE-RING finger protein Sakura) {Human	90.87
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	82.03

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.1e-28  Score=179.43  Aligned_cols=61  Identities=49%  Similarity=1.084  Sum_probs=57.4

Q ss_pred             cccCCccccccccccc-cceeeecCccccccCCCCCCCCCCccchHhhHHHHHHhCCccccc
Q 030404          113 KRVVNRCSGCRRKVGL-TGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAA  173 (178)
Q Consensus       113 ~~~~~rC~~C~kkvgl-~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~NP~v~~~  173 (178)
                      +..++||+.|+|||+| ++|+||||++||+.|||||.|+|+||||+.||++|+++||+|.+.
T Consensus        22 k~~~~RC~~C~KKl~l~~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~~k~~L~k~NP~i~p~   83 (85)
T d1wffa_          22 KKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             cccCCcChhcCCeecCCcCeecCCCCEehhhcCCCcCcCCCcchHHHHHHHHHHHCCccCCC
Confidence            4567899999999999 589999999999999999999999999999999999999999874

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.91  E-value=2e-26  Score=159.62  Aligned_cols=52  Identities=54%  Similarity=1.213  Sum_probs=48.3

Q ss_pred             ccccCCccccccccccccceeeecCccccccCCCCCCCCCCccchHhhHHHH
Q 030404          112 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAI  163 (178)
Q Consensus       112 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  163 (178)
                      ++..++||..|+|||+|++|+||||++||+.|||||.|+|+||||++||..|
T Consensus        11 ~~~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~Gr~~~   62 (64)
T d1wfha_          11 PPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPS   62 (64)
T ss_dssp             CCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCC
T ss_pred             CCCCCCcChhhCCCccceeeeccCCCEehhhcCCCcCcCCCCcchhccCCCC
Confidence            3567899999999999999999999999999999999999999999998543

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=4.7e-25  Score=156.49  Aligned_cols=48  Identities=67%  Similarity=1.380  Sum_probs=45.1

Q ss_pred             cccCCccccccccccccceeeecCccccccCCCCCCCCCCccchHhhH
Q 030404          113 KRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGR  160 (178)
Q Consensus       113 ~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r  160 (178)
                      +..++||..|+|||+|++|+||||++||+.|||||.|+|+||||+.|.
T Consensus        22 k~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~g~   69 (74)
T d1wfla_          22 KPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS   69 (74)
T ss_dssp             CSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSS
T ss_pred             CCCCCcChhhCCcccceeeEccCCCEehhhcCCCcCcCCCCccccccc
Confidence            456899999999999999999999999999999999999999998764

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=1.3e-24  Score=154.16  Aligned_cols=50  Identities=48%  Similarity=1.218  Sum_probs=47.0

Q ss_pred             hccccCCccccccccccccceeeecCccccccCCCCCCCCCCccchHhhH
Q 030404          111 VEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGR  160 (178)
Q Consensus       111 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r  160 (178)
                      +++..++||+.|+|||+|++|.||||++||+.|||||.|+|+||||+.||
T Consensus        20 ~~k~kk~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~C~fDyK~~gr   69 (74)
T d1wfpa_          20 PPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAS   69 (74)
T ss_dssp             CTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCC
T ss_pred             CCCCCCCcChhcCCccCCCceecCCCChhhhccCCccCcCCCCcchhccc
Confidence            34567899999999999999999999999999999999999999999987

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.9e-17  Score=110.26  Aligned_cols=32  Identities=34%  Similarity=0.869  Sum_probs=29.4

Q ss_pred             cccccCCCcCCccCCCchhhhhhhhhhhhccc
Q 030404           20 LCVNNCGFTGNPATNNMCQKCFNATATTTASA   51 (178)
Q Consensus        20 lC~ngCGFfGs~at~n~CSkCyr~~~~~~~~~   51 (178)
                      ||.|||||||||+|+|||||||||+..++++.
T Consensus         1 lC~~gCGFyG~~~~~g~CSkCyr~~~~k~~q~   32 (56)
T d2c7na1           1 LCKKGCGYYGNPAWQGFCSKCWREEYHKARQK   32 (56)
T ss_dssp             CCTTCSSSCCCGGGTTCCHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCcccCCcchHHHHHHHHHHHHH
Confidence            79999999999999999999999998876654

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=2.9e-07  Score=65.59  Aligned_cols=39  Identities=36%  Similarity=0.716  Sum_probs=33.5

Q ss_pred             ccCCcccc--ccccccccceeee-cCccccccCCCCCCCCCCc
Q 030404          114 RVVNRCSG--CRRKVGLTGFRCR-CGELFCGEHRYSDRHDCSY  153 (178)
Q Consensus       114 ~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f  153 (178)
                      ....+|..  |++ +.++.|.|. |+..||..||+++.|.|.-
T Consensus        23 ~~~~~Cs~~~C~~-~~~lp~~C~~C~~~FC~~Hr~~e~H~C~~   64 (86)
T d1wfea_          23 HKSYSCSFKGCTD-VELVAVICPYCEKNFCLRHRHQSDHDCEK   64 (86)
T ss_dssp             SCCEECCSTTCCC-EESSCEECTTTCCEECGGGCSTGGGTCSS
T ss_pred             CccCcCCCCCCCC-cccCcccchhhCcchhhccCCccCCCCCC
Confidence            34568987  985 678999996 9999999999999999963

>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Zinc finger FYVE domain containing protein 19
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.23  E-value=0.004  Score=43.27  Aligned_cols=29  Identities=38%  Similarity=0.988  Sum_probs=25.5

Q ss_pred             cCCcccccccccccc--ceeee-cCccccccC
Q 030404          115 VVNRCSGCRRKVGLT--GFRCR-CGELFCGEH  143 (178)
Q Consensus       115 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  143 (178)
                      ..++|..|++..+++  -..|| ||.+||..+
T Consensus         8 ~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~C   39 (88)
T d1wfka_           8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC   39 (88)
T ss_dssp             CCSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred             ccCcCcccCchhccccccccccccChhhChHH
Confidence            468999999999986  48999 999999876

>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: vps27p protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.13  E-value=0.011  Score=38.84  Aligned_cols=27  Identities=44%  Similarity=1.102  Sum_probs=23.7

Q ss_pred             Ccccccccccccc--ceeee-cCccccccC
Q 030404          117 NRCSGCRRKVGLT--GFRCR-CGELFCGEH  143 (178)
Q Consensus       117 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  143 (178)
                      +.|..|+++.+|+  -..|| ||.+||+.+
T Consensus         6 ~~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   35 (67)
T d1vfya_           6 DACMICSKKFSLLNRKHHCRSCGGVFCQEH   35 (67)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred             cccccCCCcccCcccccccccCCCEecccc
Confidence            4599999999996  48999 999999876

>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Eea1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.69  E-value=0.014  Score=37.82  Aligned_cols=28  Identities=39%  Similarity=1.079  Sum_probs=24.3

Q ss_pred             CCcccccccccccc--ceeee-cCccccccC
Q 030404          116 VNRCSGCRRKVGLT--GFRCR-CGELFCGEH  143 (178)
Q Consensus       116 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  143 (178)
                      ...|..|+++.+++  -..|| ||.+||+..
T Consensus         8 ~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~C   38 (64)
T d1joca1           8 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC   38 (64)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCcCcCcCCcccCCccccchhhhCCeecccc
Confidence            46799999999997  48899 999999865

>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Hrs
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.44  E-value=0.018  Score=38.26  Aligned_cols=28  Identities=39%  Similarity=1.070  Sum_probs=24.7

Q ss_pred             Ccccccccccccc--ceeee-cCccccccCC
Q 030404          117 NRCSGCRRKVGLT--GFRCR-CGELFCGEHR  144 (178)
Q Consensus       117 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  144 (178)
                      +.|..|+++.+++  -..|| ||.+||+.+-
T Consensus        14 ~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~   44 (72)
T d1dvpa2          14 RVCHRCRVEFTFTNRKHHCRNCGQVFCGQCT   44 (72)
T ss_dssp             SBCTTTCCBCCSSSCCEECTTTCCEECSTTS
T ss_pred             CccccCCCcccCccccccccccCCeeChhhh
Confidence            5699999999996  48999 9999998874

>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Effector domain of rabphilin-3a
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.56  E-value=0.038  Score=39.73  Aligned_cols=32  Identities=28%  Similarity=0.659  Sum_probs=26.3

Q ss_pred             cccCCcccccccccccc---ceeee-cCccccccCC
Q 030404          113 KRVVNRCSGCRRKVGLT---GFRCR-CGELFCGEHR  144 (178)
Q Consensus       113 ~~~~~rC~~C~kkvgl~---gf~Cr-Cg~~FC~~HR  144 (178)
                      ....+.|..|++.++++   +..|| ||.+||..=+
T Consensus        45 ~~~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~   80 (124)
T d1zbdb_          45 GDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG   80 (124)
T ss_dssp             SCSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred             ccCCCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence            44578999999999863   57899 9999998854

>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Rififylin (FYVE-RING finger protein Sakura)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.87  E-value=0.042  Score=34.35  Aligned_cols=26  Identities=27%  Similarity=0.641  Sum_probs=22.6

Q ss_pred             cccccccccccc--ceeee-cCccccccC
Q 030404          118 RCSGCRRKVGLT--GFRCR-CGELFCGEH  143 (178)
Q Consensus       118 rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  143 (178)
                      -|..|+++.+++  -..|| ||.+||+..
T Consensus         2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   30 (51)
T d1y02a2           2 SCKSCGAHFANTARKQTCLDCKKNFCMTC   30 (51)
T ss_dssp             CCTTTCCCCSSGGGCEECTTTCCEECGGG
T ss_pred             CccccCCcccCCccCcccccCCcccCccc
Confidence            488999999996  48999 999999876

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=82.03  E-value=0.66  Score=29.36  Aligned_cols=42  Identities=21%  Similarity=0.348  Sum_probs=29.8

Q ss_pred             cCCcccccccccc-c--cceeee-cCccccccCCCCCCCCCCccch
Q 030404          115 VVNRCSGCRRKVG-L--TGFRCR-CGELFCGEHRYSDRHDCSYDYK  156 (178)
Q Consensus       115 ~~~rC~~C~kkvg-l--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  156 (178)
                      .+..|..|++.+- +  .||+|+ |+.++=....-.=...|..++.
T Consensus        18 ~~~~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~~~   63 (66)
T d1tbna_          18 SPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHT   63 (66)
T ss_dssp             SCCBCSSSCCBCCTTSSSCEEETTTCCEECTTTTTTSCCCSSCCCC
T ss_pred             CCcCCcCCCCcccCcccCccccCcccCeEChHHhccccccCCCCcc
Confidence            4578999999884 4  389998 9888765555444556766654