Citrus Sinensis ID: 030474

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDEDGRMEYAKYVNSSPYINCFLGRPPKYPQPIGKQQLFYHGGCSICYFLLQLSTI
cccEEEEEcccccccccccccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccc
cccEEEEEcccHHHHccccccHHHHHHHHHHHHccEEEcccccccHHHHHHHHHHHcccccccccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHccccccccHccccccccHHHHHHHHHHHHHHHHHHHHHcccccc
mrpqivlfgdsitqqsfgsagwGAALADAYCRKADVLLRGYGGYNTRWALFLLHhifpldnsnppvattiffgandaalfgrtserqhvpveeygDNLKIMVQHLKRLSPIMLVVlitpppvdedgrmeyakyvnsspyincflgrppkypqpigkqqlfyhggcsiCYFLLQLSTI
MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDEDGRMEYAKYVNSSPYINCFLGRPPKYPQPIGKQQLFYHGGCSICYFLLQLSTI
MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDEDGRMEYAKYVNSSPYINCFLGRPPKYPQPIGKQQLFYHGGCSICYFLLQLSTI
****IVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDEDGRMEYAKYVNSSPYINCFLGRPPKYPQPIGKQQLFYHGGCSICYFLLQL***
MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDEDGRMEYAKYVNSSPYINCFLGRPPKYPQPIGKQQLFYHGGCSICYFLLQLSTI
MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDEDGRMEYAKYVNSSPYINCFLGRPPKYPQPIGKQQLFYHGGCSICYFLLQLSTI
MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDEDGRMEYAKYVNSSPYINCFLGRPPKYPQPIGKQQLFYHGGCSICYFLLQLSTI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDEDGRMEYAKYVNSSPYINCFLGRPPKYPQPIGKQQLFYHGGCSICYFLLQLSTI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query177 2.2.26 [Sep-21-2011]
Q9FM04242 GDSL esterase/lipase At5g yes no 0.757 0.553 0.783 2e-59
Q6NMR9241 GDSL esterase/lipase At5g no no 0.932 0.684 0.463 5e-38
Q2TAA2248 Isoamyl acetate-hydrolyzi yes no 0.723 0.516 0.541 6e-30
Q9SRM5256 GDSL esterase/lipase CPRD no no 0.762 0.527 0.435 6e-28
Q711G3249 Isoamyl acetate-hydrolyzi yes no 0.666 0.473 0.535 9e-28
O80443 312 GDSL esterase/lipase At2g no no 0.700 0.397 0.467 9e-28
Q9DB29249 Isoamyl acetate-hydrolyzi yes no 0.666 0.473 0.519 1e-27
Q3SZ16249 Isoamyl acetate-hydrolyzi yes no 0.683 0.485 0.524 1e-27
Q503L4238 Isoamyl acetate-hydrolyzi yes no 0.672 0.5 0.491 1e-23
P41734238 Isoamyl acetate-hydrolyzi yes no 0.587 0.436 0.404 6e-14
>sp|Q9FM04|GDL88_ARATH GDSL esterase/lipase At5g62930 OS=Arabidopsis thaliana GN=At5g62930 PE=2 SV=3 Back     alignment and function desciption
 Score =  227 bits (579), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 105/134 (78%), Positives = 120/134 (89%)

Query: 1   MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLD 60
           MRP+IVLFGDSIT QSF S GWG+ALADAY RKADV++RGYGGYNTRWALFLLHHIFPL 
Sbjct: 1   MRPEIVLFGDSITAQSFRSGGWGSALADAYSRKADVVVRGYGGYNTRWALFLLHHIFPLG 60

Query: 61  NSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPP 120
           +S+PPVATTIFFGANDAAL GRTS+RQHVPVEEY DN++ +VQHLK+ SP ML+VLITPP
Sbjct: 61  SSSPPVATTIFFGANDAALKGRTSDRQHVPVEEYTDNVRKIVQHLKKCSPTMLIVLITPP 120

Query: 121 PVDEDGRMEYAKYV 134
           P+DE GR  YA+ +
Sbjct: 121 PIDEAGRQSYAESI 134

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q6NMR9|GDL84_ARATH GDSL esterase/lipase At5g45920 OS=Arabidopsis thaliana GN=At5g45920 PE=2 SV=1 Back     alignment and function description
>sp|Q2TAA2|IAH1_HUMAN Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Homo sapiens GN=IAH1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SRM5|CPR49_ARATH GDSL esterase/lipase CPRD49 OS=Arabidopsis thaliana GN=CPRD49 PE=2 SV=1 Back     alignment and function description
>sp|Q711G3|IAH1_RAT Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus GN=Iah1 PE=2 SV=2 Back     alignment and function description
>sp|O80443|GDL46_ARATH GDSL esterase/lipase At2g38180 OS=Arabidopsis thaliana GN=At2g38180 PE=2 SV=1 Back     alignment and function description
>sp|Q9DB29|IAH1_MOUSE Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Mus musculus GN=Iah1 PE=2 SV=1 Back     alignment and function description
>sp|Q3SZ16|IAH1_BOVIN Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Bos taurus GN=IAH1 PE=2 SV=1 Back     alignment and function description
>sp|Q503L4|IAH1_DANRE Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Danio rerio GN=iah1 PE=2 SV=2 Back     alignment and function description
>sp|P41734|IAH1_YEAST Isoamyl acetate-hydrolyzing esterase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IAH1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query177
15242002242 GDSL esterase/lipase [Arabidopsis thalia 0.757 0.553 0.783 1e-57
297793885242 GDSL-motif lipase/hydrolase family prote 0.853 0.623 0.703 1e-57
224119366242 predicted protein [Populus trichocarpa] 0.740 0.541 0.801 8e-57
449469014242 PREDICTED: GDSL esterase/lipase At5g6293 0.745 0.545 0.757 9e-55
225457013242 PREDICTED: GDSL esterase/lipase At5g6293 0.745 0.545 0.757 3e-54
223945583230 unknown [Zea mays] gi|414587916|tpg|DAA3 0.745 0.573 0.727 9e-53
226495487268 LOC100284574 [Zea mays] gi|195643134|gb| 0.745 0.492 0.727 1e-52
238005828223 unknown [Zea mays] gi|414587914|tpg|DAA3 0.745 0.591 0.727 1e-52
194697194268 unknown [Zea mays] gi|414587915|tpg|DAA3 0.745 0.492 0.727 2e-52
356513477242 PREDICTED: GDSL esterase/lipase At5g6293 0.762 0.557 0.681 2e-52
>gi|15242002|ref|NP_201098.1| GDSL esterase/lipase [Arabidopsis thaliana] gi|334302899|sp|Q9FM04.3|GDL88_ARATH RecName: Full=GDSL esterase/lipase At5g62930 gi|18087589|gb|AAL58925.1|AF462837_1 AT5g62930/MQB2_230 [Arabidopsis thaliana] gi|10177471|dbj|BAB10862.1| unnamed protein product [Arabidopsis thaliana] gi|21700821|gb|AAM70534.1| AT5g62930/MQB2_230 [Arabidopsis thaliana] gi|332010292|gb|AED97675.1| GDSL esterase/lipase [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  227 bits (579), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 105/134 (78%), Positives = 120/134 (89%)

Query: 1   MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLD 60
           MRP+IVLFGDSIT QSF S GWG+ALADAY RKADV++RGYGGYNTRWALFLLHHIFPL 
Sbjct: 1   MRPEIVLFGDSITAQSFRSGGWGSALADAYSRKADVVVRGYGGYNTRWALFLLHHIFPLG 60

Query: 61  NSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPP 120
           +S+PPVATTIFFGANDAAL GRTS+RQHVPVEEY DN++ +VQHLK+ SP ML+VLITPP
Sbjct: 61  SSSPPVATTIFFGANDAALKGRTSDRQHVPVEEYTDNVRKIVQHLKKCSPTMLIVLITPP 120

Query: 121 PVDEDGRMEYAKYV 134
           P+DE GR  YA+ +
Sbjct: 121 PIDEAGRQSYAESI 134

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297793885|ref|XP_002864827.1| GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata] gi|297310662|gb|EFH41086.1| GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224119366|ref|XP_002318054.1| predicted protein [Populus trichocarpa] gi|222858727|gb|EEE96274.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449469014|ref|XP_004152216.1| PREDICTED: GDSL esterase/lipase At5g62930-like [Cucumis sativus] gi|449484197|ref|XP_004156813.1| PREDICTED: GDSL esterase/lipase At5g62930-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|225457013|ref|XP_002282452.1| PREDICTED: GDSL esterase/lipase At5g62930 [Vitis vinifera] gi|297733770|emb|CBI15017.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|223945583|gb|ACN26875.1| unknown [Zea mays] gi|414587916|tpg|DAA38487.1| TPA: hypothetical protein ZEAMMB73_856407 [Zea mays] Back     alignment and taxonomy information
>gi|226495487|ref|NP_001150941.1| LOC100284574 [Zea mays] gi|195643134|gb|ACG41035.1| isoamyl acetate-hydrolyzing esterase [Zea mays] Back     alignment and taxonomy information
>gi|238005828|gb|ACR33949.1| unknown [Zea mays] gi|414587914|tpg|DAA38485.1| TPA: hypothetical protein ZEAMMB73_856407 [Zea mays] Back     alignment and taxonomy information
>gi|194697194|gb|ACF82681.1| unknown [Zea mays] gi|414587915|tpg|DAA38486.1| TPA: isoamyl acetate-hydrolyzing esterase [Zea mays] Back     alignment and taxonomy information
>gi|356513477|ref|XP_003525440.1| PREDICTED: GDSL esterase/lipase At5g62930-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query177
TAIR|locus:2170738242 AT5G62930 "AT5G62930" [Arabido 0.757 0.553 0.783 3.7e-55
TAIR|locus:2152395241 AT5G45920 "AT5G45920" [Arabido 0.836 0.614 0.5 9.2e-36
UNIPROTKB|Q2TAA2248 IAH1 "Isoamyl acetate-hydrolyz 0.683 0.487 0.564 4.9e-30
RGD|727866249 Iah1 "isoamyl acetate-hydrolyz 0.683 0.485 0.532 5.3e-30
UNIPROTKB|E2R7Q2249 IAH1 "Uncharacterized protein" 0.683 0.485 0.548 1.6e-29
UNIPROTKB|F1SA96249 IAH1 "Uncharacterized protein" 0.683 0.485 0.548 3.4e-29
UNIPROTKB|Q3SZ16249 IAH1 "Isoamyl acetate-hydrolyz 0.683 0.485 0.524 5e-28
MGI|MGI:1914982249 Iah1 "isoamyl acetate-hydrolyz 0.683 0.485 0.524 5e-28
TAIR|locus:2074688256 AT3G11210 "AT3G11210" [Arabido 0.762 0.527 0.435 2.8e-27
TAIR|locus:2042862 312 AT2G38180 "AT2G38180" [Arabido 0.700 0.397 0.467 3.5e-27
TAIR|locus:2170738 AT5G62930 "AT5G62930" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 105/134 (78%), Positives = 120/134 (89%)

Query:     1 MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLD 60
             MRP+IVLFGDSIT QSF S GWG+ALADAY RKADV++RGYGGYNTRWALFLLHHIFPL 
Sbjct:     1 MRPEIVLFGDSITAQSFRSGGWGSALADAYSRKADVVVRGYGGYNTRWALFLLHHIFPLG 60

Query:    61 NSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPP 120
             +S+PPVATTIFFGANDAAL GRTS+RQHVPVEEY DN++ +VQHLK+ SP ML+VLITPP
Sbjct:    61 SSSPPVATTIFFGANDAALKGRTSDRQHVPVEEYTDNVRKIVQHLKKCSPTMLIVLITPP 120

Query:   121 PVDEDGRMEYAKYV 134
             P+DE GR  YA+ +
Sbjct:   121 PIDEAGRQSYAESI 134
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016787 "hydrolase activity" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2152395 AT5G45920 "AT5G45920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q2TAA2 IAH1 "Isoamyl acetate-hydrolyzing esterase 1 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|727866 Iah1 "isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2R7Q2 IAH1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SA96 IAH1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZ16 IAH1 "Isoamyl acetate-hydrolyzing esterase 1 homolog" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1914982 Iah1 "isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
TAIR|locus:2074688 AT3G11210 "AT3G11210" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042862 AT2G38180 "AT2G38180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FM04GDL88_ARATH3, ., 1, ., 1, ., -0.78350.75700.5537yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1LOW CONFIDENCE prediction!
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AT5G62930
GDSL-motif lipase/hydrolase family protein; GDSL-motif lipase/hydrolase family protein; FUNCTIONS IN- hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN- lipid metabolic process; LOCATED IN- cellular_component unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Esterase, SGNH hydrolase-type, subgroup (InterPro-IPR013831), Lipase, GDSL (InterPro-IPR001087), Esterase, SGNH hydrolase-type (InterPro-IPR013830); BEST Arabidopsis thaliana protein match is- carboxylesterase/ hydrolase/ h [...] (242 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query177
cd01838199 cd01838, Isoamyl_acetate_hydrolase_like, Isoamyl-a 2e-62
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 2e-22
pfam13472174 pfam13472, Lipase_GDSL_2, GDSL-like Lipase/Acylhyd 1e-12
cd00229187 cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_h 7e-12
COG2755216 COG2755, TesA, Lysophospholipase L1 and related es 2e-06
cd01821198 cd01821, Rhamnogalacturan_acetylesterase_like, Rha 3e-06
cd01834191 cd01834, SGNH_hydrolase_like_2, SGNH_hydrolase sub 7e-06
cd01828169 cd01828, sialate_O-acetylesterase_like2, sialate_O 7e-05
>gnl|CDD|238876 cd01838, Isoamyl_acetate_hydrolase_like, Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information 
 Score =  191 bits (487), Expect = 2e-62
 Identities = 78/138 (56%), Positives = 94/138 (68%), Gaps = 5/138 (3%)

Query: 4   QIVLFGDSITQQSF--GSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDN 61
           +IVLFGDSITQ SF  G  G+GAALAD Y RK DV+ RG+ GYNTRWAL +L  IF  + 
Sbjct: 1   KIVLFGDSITQFSFDQGEFGFGAALADVYSRKLDVINRGFSGYNTRWALKVLPKIFLEEK 60

Query: 62  SNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPP 121
              P   TIFFGANDAAL G+    QHVP++EY +NL+ +V HLK LSP   V+LITPPP
Sbjct: 61  LAQPDLVTIFFGANDAALPGQP---QHVPLDEYKENLRKIVSHLKSLSPKTKVILITPPP 117

Query: 122 VDEDGRMEYAKYVNSSPY 139
           VDE+   +  +   S P 
Sbjct: 118 VDEEAWEKSLEDGGSQPG 135

SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 199
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information
>gnl|CDD|222156 pfam13472, Lipase_GDSL_2, GDSL-like Lipase/Acylhydrolase family Back     alignment and domain information
>gnl|CDD|238141 cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|225353 COG2755, TesA, Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|238859 cd01821, Rhamnogalacturan_acetylesterase_like, Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>gnl|CDD|238872 cd01834, SGNH_hydrolase_like_2, SGNH_hydrolase subfamily Back     alignment and domain information
>gnl|CDD|238866 cd01828, sialate_O-acetylesterase_like2, sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 177
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 99.97
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 99.95
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 99.94
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 99.94
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 99.93
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 99.93
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 99.93
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 99.92
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 99.92
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 99.91
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 99.91
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 99.91
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 99.91
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 99.91
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 99.9
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 99.9
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 99.9
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 99.89
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 99.89
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 99.89
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 99.86
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 99.81
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 99.81
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 99.78
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 99.77
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 99.76
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 99.7
COG2755216 TesA Lysophospholipase L1 and related esterases [A 99.66
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 99.6
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 99.54
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.42
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 99.33
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 99.04
COG2845354 Uncharacterized protein conserved in bacteria [Fun 98.76
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 98.5
KOG3670397 consensus Phospholipase [Lipid transport and metab 98.34
PF04311 327 DUF459: Protein of unknown function (DUF459); Inte 97.71
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 97.65
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 97.57
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 97.55
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 97.49
PF08885251 GSCFA: GSCFA family; InterPro: IPR014982 This grou 95.56
PF04914130 DltD_C: DltD C-terminal region; InterPro: IPR00699 91.68
cd02067119 B12-binding B12 binding domain (B12-BD). This doma 91.48
PF13380116 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 87.59
PLN03156351 GDSL esterase/lipase; Provisional 83.09
PF07611 345 DUF1574: Protein of unknown function (DUF1574); In 81.75
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information 
Probab=99.97  E-value=6.6e-31  Score=202.18  Aligned_cols=166  Identities=51%  Similarity=0.772  Sum_probs=142.3

Q ss_pred             CCceEEEEecccCccccCCCChHHHHHHHHcccCcEEEcccCCcchhhHHHhhcccCCCCCCCCCcEEEEEecccccccc
Q 030474            1 MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNSNPPVATTIFFGANDAALF   80 (177)
Q Consensus         1 ~~~~I~~~GDSit~gg~~~~~w~~~l~~~l~~~~~v~N~G~~G~ts~~~l~~l~~~~~~~~~~~pd~Vvi~~G~ND~~~~   80 (177)
                      |+|+|+.||||||+.++.+|||...|++.+.++.+|+++|.+|+||+++++.+.++++.+..-.|-.|+|.+|+||++..
T Consensus         5 ~rp~i~LFGdSItq~sF~~gGwGA~Lad~y~RkaDv~~RGysGynSRwALkvL~~ifp~~~s~~p~lvtVffGaNDs~l~   84 (245)
T KOG3035|consen    5 MRPRIVLFGDSITQFSFTDGGWGAALADLYSRKADVLLRGYSGYNSRWALKVLPEIFPKGSSIQPVLVTVFFGANDSCLP   84 (245)
T ss_pred             ccccEEEecchhhhhcccCCchhHHHHHHHHHhhhhhhcccccchhHHHHHHhhhhccccccCCceEEEEEecCccccCC
Confidence            78999999999999888999999999999999999999999999999999999999987666789999999999999998


Q ss_pred             CCCCCCccCCHHHHHHHHHHHHHHHHHhCCCCEEEEEcCCCCChhHHHHH-------------------------HHHhC
Q 030474           81 GRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDEDGRMEY-------------------------AKYVN  135 (177)
Q Consensus        81 ~~~~~~~~~~~~~~~~nl~~ii~~~r~~~p~~~vil~tp~p~~~~~~~~~-------------------------~a~~~  135 (177)
                      ......+++|.++|.+||++|++.++...|.++||++||||++++.|.++                         .|++.
T Consensus        85 ~~~~~~~hvPl~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~e~~~~~~~RtNe~~~~Ya~ac~~la~e~  164 (245)
T KOG3035|consen   85 EPSSLGQHVPLEEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQEPYVLGPERTNETVGTYAKACANLAQEI  164 (245)
T ss_pred             CCCCCCCccCHHHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhccchhccchhhhhHHHHHHHHHHHHHHHh
Confidence            76666789999999999999999999999999999999999999865322                         35677


Q ss_pred             CCceee--cccCCCCCC---CCCCCccceeecccchhhhhh
Q 030474          136 SSPYIN--CFLGRPPKY---PQPIGKQQLFYHGGCSICYFL  171 (177)
Q Consensus       136 ~vp~id--~~l~~~~~~---l~~dG~~~~~~~~~~~~~~~~  171 (177)
                      ++..+|  ..+....+|   +-.||     -|-..++|=++
T Consensus       165 ~l~~vdlws~~Q~~~dw~~~~ltDG-----LHlS~~G~~iv  200 (245)
T KOG3035|consen  165 GLYVVDLWSKMQESDDWQTSCLTDG-----LHLSPKGNKIV  200 (245)
T ss_pred             CCeeeeHHhhhhhcccHHHHHhccc-----eeeccccchhh
Confidence            899987  344444444   56778     66666665443

>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>PF04311 DUF459: Protein of unknown function (DUF459); InterPro: IPR007407 This is a putative periplasmic protein Back     alignment and domain information
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised Back     alignment and domain information
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine Back     alignment and domain information
>cd02067 B12-binding B12 binding domain (B12-BD) Back     alignment and domain information
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A Back     alignment and domain information
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information
>PF07611 DUF1574: Protein of unknown function (DUF1574); InterPro: IPR011468 This is a family of hypothetical proteins found in Leptospira interrogans and other bacteria Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query177
3mil_A240 Crystal Structure Of Isoamyl Acetate-Hydrolyzing Es 5e-15
1yzf_A195 Crystal Structure Of The LipaseACYLHYDROLASE FROM E 8e-05
>pdb|3MIL|A Chain A, Crystal Structure Of Isoamyl Acetate-Hydrolyzing Esterase From Saccharomyces Cerevisiae Length = 240 Back     alignment and structure 
Iteration: 1

 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 17/121 (14%)
Query: 4   QIVLFGDSITQQSFGSA---------GWGAALADAYCRKADVLLRGYGGYNTRWALFLLH 54
           + +LFGDSIT+ +F +            GAAL + Y RK D+L RG+ GY +RWAL +L 
Sbjct: 5   KFLLFGDSITEFAFNTRPIEDGKDQYALGAALVNEYTRKMDILQRGFKGYTSRWALKILP 64
Query: 55  HIFPLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLK--RLSPIM 112
            I  L + +  V  TIF GANDA   G     Q VP+ E+ DN++ MV  +K   + PI+
Sbjct: 65  EI--LKHESNIVMATIFLGANDACSAG----PQSVPLPEFIDNIRQMVSLMKSYHIRPII 118
Query: 113 L 113
           +
Sbjct: 119 I 119
>pdb|1YZF|A Chain A, Crystal Structure Of The LipaseACYLHYDROLASE FROM ENTEROCOCCUS Faecalis Length = 195 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query177
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 2e-37
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 3e-27
2hsj_A214 Putative platelet activating factor; structr genom 2e-25
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 4e-19
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 1e-16
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 2e-15
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 6e-15
1vjg_A218 Putative lipase from the G-D-S-L family; structura 9e-15
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 1e-14
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 6e-14
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 4e-12
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 3e-11
3bzw_A274 Putative lipase; protein structure initiative II, 6e-11
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 2e-09
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 9e-08
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 1e-07
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 3e-06
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 1e-05
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 2e-05
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Length = 240 Back     alignment and structure
 Score =  128 bits (322), Expect = 2e-37
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 17/139 (12%)

Query: 1   MRPQIVLFGDSITQQSFGS---------AGWGAALADAYCRKADVLLRGYGGYNTRWALF 51
              + +LFGDSIT+ +F +            GAAL + Y RK D+L RG+ GY +RWAL 
Sbjct: 2   DYEKFLLFGDSITEFAFNTRPIEDGKDQYALGAALVNEYTRKMDILQRGFKGYTSRWALK 61

Query: 52  LLHHIFPLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPI 111
           +L  I   +  +  V  TIF GANDA     ++  Q VP+ E+ DN++ MV  +K     
Sbjct: 62  ILPEILKHE--SNIVMATIFLGANDAC----SAGPQSVPLPEFIDNIRQMVSLMKSYHIR 115

Query: 112 MLVVLITPPPVDEDGRMEY 130
              ++I P  VD +   + 
Sbjct: 116 --PIIIGPGLVDREKWEKE 132
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Length = 195 Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Length = 214 Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Length = 216 Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Length = 232 Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Length = 233 Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 216 Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Length = 218 Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Length = 375 Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Length = 232 Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Length = 204 Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Length = 232 Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Length = 274 Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Length = 190 Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Length = 385 Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Length = 229 Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Length = 215 Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} Length = 185 Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Length = 341 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query177
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 99.93
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 99.93
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 99.93
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 99.92
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 99.92
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 99.91
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.91
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 99.91
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 99.9
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 99.9
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 99.9
2hsj_A214 Putative platelet activating factor; structr genom 99.89
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 99.89
1vjg_A218 Putative lipase from the G-D-S-L family; structura 99.88
3bzw_A274 Putative lipase; protein structure initiative II, 99.88
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 99.87
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 99.87
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 99.87
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 99.87
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 99.86
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 99.8
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 99.79
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 99.78
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 99.71
4i8i_A271 Hypothetical protein; 5-stranded beta sheet flanke 98.02
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 97.25
1tmy_A120 CHEY protein, TMY; chemotaxis, phosphoryl transfer 91.46
3kcn_A151 Adenylate cyclase homolog; SGX, PSI 2, structural 90.56
2qxy_A142 Response regulator; regulation of transcription, N 88.92
1zmb_A290 Acetylxylan esterase related enzyme; alpha-beta pr 88.46
3cu5_A141 Two component transcriptional regulator, ARAC FAM; 88.42
1srr_A124 SPO0F, sporulation response regulatory protein; as 88.16
1mvo_A136 PHOP response regulator; phosphate regulon, transc 86.91
3cfy_A137 Putative LUXO repressor protein; structural genomi 86.48
3nhm_A133 Response regulator; protein structure initiative I 86.43
3eod_A130 Protein HNR; response regulator, phosphoprotein, t 86.41
3f6c_A134 Positive transcription regulator EVGA; structural 86.37
3hzh_A157 Chemotaxis response regulator (CHEY-3); phosphatas 86.35
3gl9_A122 Response regulator; beta-sheet, surrounded by alph 84.71
3hdg_A137 Uncharacterized protein; two-component sensor acti 84.32
3hv2_A153 Response regulator/HD domain protein; PSI-2, NYSGX 83.55
4e7p_A150 Response regulator; DNA binding, cytosol, transcri 83.32
1dz3_A130 Stage 0 sporulation protein A; response regulator, 82.35
3i42_A127 Response regulator receiver domain protein (CHEY- 82.2
3bma_A407 D-alanyl-lipoteichoic acid synthetase; structural 82.09
2qr3_A140 Two-component system response regulator; structura 81.9
3rqi_A184 Response regulator protein; structural genomics, s 81.86
1kgs_A225 DRRD, DNA binding response regulator D; DNA-bindin 81.52
3kto_A136 Response regulator receiver protein; PSI-II,struct 81.19
2jba_A127 Phosphate regulon transcriptional regulatory PROT; 81.12
3eul_A152 Possible nitrate/nitrite response transcriptional 80.67
1qkk_A155 DCTD, C4-dicarboxylate transport transcriptional r 80.64
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
Probab=99.93  E-value=6.2e-26  Score=177.68  Aligned_cols=155  Identities=18%  Similarity=0.200  Sum_probs=125.2

Q ss_pred             CceEEEEecccCccccCC---------CChHHHHHHHHcccCcEEEcccCCcchh----------hHHHhhcccCCCCCC
Q 030474            2 RPQIVLFGDSITQQSFGS---------AGWGAALADAYCRKADVLLRGYGGYNTR----------WALFLLHHIFPLDNS   62 (177)
Q Consensus         2 ~~~I~~~GDSit~gg~~~---------~~w~~~l~~~l~~~~~v~N~G~~G~ts~----------~~l~~l~~~~~~~~~   62 (177)
                      .++|+|+|||||+ |++.         .+|+..|++.+..++.|+|.|++|.|+.          ..+.++++.+.   .
T Consensus        23 ~~~I~~lGDSit~-G~~~~~~~~~~~~~~w~~~l~~~l~~~~~v~N~g~~G~t~~~~~~~~~~~~~~~~~l~~~l~---~   98 (232)
T 3dci_A           23 MKTVLAFGDSLTW-GADPATGLRHPVEHRWPDVLEAELAGKAKVHPEGLGGRTTCYDDHAGPACRNGARALEVALS---C   98 (232)
T ss_dssp             CEEEEEEESHHHH-TBCTTTCCBCCGGGSHHHHHHHHHTTSEEEEEEECTTCBSSCCCCSSSSCCBHHHHHHHHHH---H
T ss_pred             CCEEEEEECcccc-CCCCCCcccCCcCCccHHHHHHHhCCCCeEEEcccCCccccccCcccccchhHHHHHHHHHh---h
Confidence            4689999999998 5542         3899999999977899999999999987          77888887664   3


Q ss_pred             CCC-cEEEEEeccccccccCCCCCCccCCHHHHHHHHHHHHHHHHHhC-----CCCEEEEEcCCCCChh-----------
Q 030474           63 NPP-VATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLS-----PIMLVVLITPPPVDED-----------  125 (177)
Q Consensus        63 ~~p-d~Vvi~~G~ND~~~~~~~~~~~~~~~~~~~~nl~~ii~~~r~~~-----p~~~vil~tp~p~~~~-----------  125 (177)
                      .+| |+|+|++|+||+....      ..++++|.+++++||+.+++..     |+++|++++|+|+.+.           
T Consensus        99 ~~p~d~VvI~~GtND~~~~~------~~~~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~~~~~~~~~~~~~~~  172 (232)
T 3dci_A           99 HMPLDLVIIMLGTNDIKPVH------GGRAEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPCVAGPGGEPAGGRDI  172 (232)
T ss_dssp             HCSCSEEEEECCTTTTSGGG------TSSHHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCCCCCTTSSCGGGCCH
T ss_pred             CCCCCEEEEEeccCCCcccc------CCCHHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCcCcccCcccccccHH
Confidence            577 9999999999998642      2489999999999999999987     8999999999986431           


Q ss_pred             -------HHHHHHHHhCCCceeecccCCCCCCCCCCCccceeecccchhhhhhhh
Q 030474          126 -------GRMEYAKYVNSSPYINCFLGRPPKYPQPIGKQQLFYHGGCSICYFLLQ  173 (177)
Q Consensus       126 -------~~~~~~a~~~~vp~id~~l~~~~~~l~~dG~~~~~~~~~~~~~~~~~~  173 (177)
                             ...+.+|++.+++|||..  .....+..||     .||+..+|-.+.+
T Consensus       173 ~~~~~~~~~~~~~a~~~~v~~iD~~--~~~~~~~~Dg-----vHpn~~G~~~~A~  220 (232)
T 3dci_A          173 EQSMRLAPLYRKLAAELGHHFFDAG--SVASASPVDG-----VHLDASATAAIGR  220 (232)
T ss_dssp             HHHTTHHHHHHHHHHHHTCEEEEGG--GTCCCCTTTS-----SSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCeEEcch--HhcCcccCCC-----CCcCHHHHHHHHH
Confidence                   123456778999999832  2223467899     8999999977654
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis} Back     alignment and structure
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y Back     alignment and structure
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica} Back     alignment and structure
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima} Back     alignment and structure
>1zmb_A Acetylxylan esterase related enzyme; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.61A {Clostridium acetobutylicum} SCOP: c.23.10.7 Back     alignment and structure
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg} Back     alignment and structure
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E Back     alignment and structure
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1 Back     alignment and structure
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus} Back     alignment and structure
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12} Back     alignment and structure
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12} Back     alignment and structure
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi} Back     alignment and structure
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C Back     alignment and structure
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0 Back     alignment and structure
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} Back     alignment and structure
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A Back     alignment and structure
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A* Back     alignment and structure
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0 Back     alignment and structure
>3bma_A D-alanyl-lipoteichoic acid synthetase; structural genomics, D-alanyl-lipoteichoic acid biosynthesis structure initiative, PSI-2; 2.24A {Streptococcus pneumoniae} Back     alignment and structure
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis} Back     alignment and structure
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei} Back     alignment and structure
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A* Back     alignment and structure
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0 Back     alignment and structure
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A Back     alignment and structure
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 177
d1k7ca_233 c.23.10.4 (A:) Rhamnogalacturonan acetylesterase { 7e-15
d3dc7a1207 c.23.10.9 (A:18-224) Uncharacterized protein Lp332 3e-11
d2o14a2208 c.23.10.8 (A:160-367) Hypothetical protein YxiM {B 2e-09
d1es9a_212 c.23.10.3 (A:) Platelet-activating factor acetylhy 2e-09
d3bzwa1248 c.23.10.9 (A:38-285) Uncharacterized protein BT296 2e-08
d1fxwf_212 c.23.10.3 (F:) Platelet-activating factor acetylhy 1e-05
d2hsja1211 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 6e-05
d1jrla_179 c.23.10.5 (A:) Thioesterase I, TAP {Escherichia co 1e-04
d1yzfa1195 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enteroco 2e-04
d1vjga_201 c.23.10.6 (A:) Hypothetical protein alr1529 {Nosto 2e-04
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Length = 233 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Rhamnogalacturonan acetylesterase
domain: Rhamnogalacturonan acetylesterase
species: Fungus (Aspergillus aculeatus) [TaxId: 5053]

 Score = 67.7 bits (164), Expect = 7e-15
 Identities = 23/168 (13%), Positives = 41/168 (24%), Gaps = 24/168 (14%)

Query: 5   IVLFGDSITQQ---SFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDN 61
           + L GDS   +     G+ GWG  LA      A V+     G + R            D 
Sbjct: 3   VYLAGDSTMAKNGGGSGTNGWGEYLASYL--SATVVNDAVAGRSARSYTREGRFENIADV 60

Query: 62  SNPPVATTIFFGANDAA-----------------LFGRTSERQHVPVEEYGDNLKIMVQH 104
                   + FG ND                   +     +  +  +  +   L+   + 
Sbjct: 61  VTAGDYVIVEFGHNDGGSLSTDNGRTDCSGTGAEVCYSVYDGVNETILTFPAYLENAAKL 120

Query: 105 LKRLSPIMLVVLITPPPVDEDGRMEYAKYVNSSPYINCFLGRPPKYPQ 152
               +    V+L +  P +      +                      
Sbjct: 121 FT--AKGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEY 166
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Length = 207 Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Length = 208 Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Length = 212 Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 248 Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Length = 212 Back     information, alignment and structure
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Length = 211 Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Length = 179 Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Length = 195 Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Length = 201 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query177
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 99.93
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 99.92
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 99.9
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 99.9
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 99.9
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 99.89
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 99.87
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 99.84
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 99.81
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 99.73
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.45
d1mvoa_121 PhoP receiver domain {Bacillus subtilis [TaxId: 14 88.94
d1krwa_123 NTRC receiver domain {Salmonella typhimurium [TaxI 87.58
d1qkka_140 Transcriptional regulatory protein DctD, receiver 87.08
d1ys7a2121 Transcriptional regulatory protein PrrA, N-termina 86.58
d1ny5a1137 Transcriptional activator sigm54 (NtrC1), N-termin 85.23
d1yioa2128 Response regulatory protein StyR, N-terminal domai 84.35
d1u0sy_118 CheY protein {Thermotoga maritima [TaxId: 2336]} 83.58
d1t2da1150 Lactate dehydrogenase {Malaria parasite (Plasmodiu 81.37
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 81.18
d2pl1a1119 PhoP receiver domain {Escherichia coli [TaxId: 562 81.06
d1peya_119 Sporulation response regulator Spo0F {Bacillus sub 80.66
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: TAP-like
domain: Thioesterase I, TAP
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=3.3e-26  Score=170.70  Aligned_cols=152  Identities=19%  Similarity=0.258  Sum_probs=124.8

Q ss_pred             ceEEEEecccCccccCC---CChHHHHHHHHcccCcEEEcccCCcchhhHHHhhcccCCCCCCCCCcEEEEEeccccccc
Q 030474            3 PQIVLFGDSITQQSFGS---AGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNSNPPVATTIFFGANDAAL   79 (177)
Q Consensus         3 ~~I~~~GDSit~gg~~~---~~w~~~l~~~l~~~~~v~N~G~~G~ts~~~l~~l~~~~~~~~~~~pd~Vvi~~G~ND~~~   79 (177)
                      -||+|+|||+|+ |++.   .+|+..|++.+..+++++|.|++|.|+.+++.|+++.+.   ..+||+|+|++|+||...
T Consensus         2 ~kIl~~GDSit~-G~g~~~~~~~~~~l~~~~~~~~~v~N~g~~G~tt~~~~~r~~~~~~---~~~pd~vii~~G~ND~~~   77 (179)
T d1jrla_           2 DTLLILGDSLSA-GYRMSASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLK---QHQPRWVLVELGGNDGLR   77 (179)
T ss_dssp             EEEEEEESHHHH-CTTSCGGGSHHHHHHHHC-CCEEEEECCCTTCCHHHHHHHHHHHHH---HHCCSEEEEECCTTTTTT
T ss_pred             CEEEEEeChhhh-CcCCCCCCCHHHHHHHHHcCCcEEEEecccccccchHHHHHHHhhh---cCCCcEEEEEEecccccc
Confidence            489999999997 5553   489999999887789999999999999999999988765   478999999999999764


Q ss_pred             cCCCCCCccCCHHHHHHHHHHHHHHHHHhCCCCEEEEEcCCCCChh---------HHHHHHHHhCCCceeecc---cCCC
Q 030474           80 FGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDED---------GRMEYAKYVNSSPYINCF---LGRP  147 (177)
Q Consensus        80 ~~~~~~~~~~~~~~~~~nl~~ii~~~r~~~p~~~vil~tp~p~~~~---------~~~~~~a~~~~vp~id~~---l~~~  147 (177)
                      .        .+++.+.++++++|+.+++.  +++|++++++|....         ...+.++++++++|++..   ....
T Consensus        78 ~--------~~~~~~~~~~~~~i~~~~~~--~~~vil~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~  147 (179)
T d1jrla_          78 G--------FQPQQTEQTLRQILQDVKAA--NAEPLLMQIRPPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEVYLK  147 (179)
T ss_dssp             T--------CCHHHHHHHHHHHHHHHHHT--TCEEEEECCCCCGGGCHHHHHHHHHHHHHHHHHTTCCEECCTHHHHHTC
T ss_pred             c--------cchhhhhhhHHHHHHHHHhc--cCcEEEEecccCccchhhHHHHHHHHHHHHHHHhCCceechhhhhhccC
Confidence            3        69999999999999999997  689999988765432         112456888999999622   2345


Q ss_pred             CCCCCCCCccceeecccchhhhhhhh
Q 030474          148 PKYPQPIGKQQLFYHGGCSICYFLLQ  173 (177)
Q Consensus       148 ~~~l~~dG~~~~~~~~~~~~~~~~~~  173 (177)
                      ++++..||     .||+..+|-.+.+
T Consensus       148 ~~~~~~Dg-----lHpn~~G~~~ia~  168 (179)
T d1jrla_         148 PQWMQDDG-----IHPNRDAQPFIAD  168 (179)
T ss_dssp             GGGBCTTS-----SSBCGGGHHHHHH
T ss_pred             hhhCCCCC-----CCCCHHHHHHHHH
Confidence            78888999     8999999987654
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]} Back     information, alignment and structure
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure