Citrus Sinensis ID: 030561

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
MAKFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVTPKLTANSSSSSLLSTRREALTVSIVTTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAIC
Secondary Structure (PSIPRED)
cccEEEEEEEEEcccccccccccEEEEcccccccccccccccEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccccccccccccEEEEEEcccccccccccEEEEEEEEEEEcccccEEEccccccccccccccEEEEcccccEEccEEEEEcc
Secondary Structure Prediction (SSPRO)
cccEEEEHHHHHccccccccccEEEEEcccccccccccccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHccccccccccccccEEEEEEEEccccccccccEEEEEEEEEEEEccccEEcccccccccccccccEEEEEccccEEcHHEHHHcc
Coil and Loop (DISEMBL)
MAKFLVSYTWIqgagqgrerdhtmircfapvrsvhafhnhtirfvtpkltansssssLLSTRREALTVSIVTTTLEILISSFSASSSAAAAAAAELLelpnsggvkaldlrlgrgpvpvdgdqvAIHYYGRLAakqgwrfdstydhkdqsgepipflfilgsgkvspnflvnaic
Flexible Loop (DISEMBL)
MAKFLVSYTWiqgagqgrerDHTMIRCFAPVRSVHAFHNHTIRfvtpkltansssssllstrrEALTVSIVTTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFIlgsgkvspnFLVNAIC
Low Complexity Region (SEG)
MAKFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVTPKLTANsssssllsTRREALTVSIVTTTLEILIssfsasssaaaaaaaELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAIC
Disordered region (IsUnstruct)
***FLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVT******************ALTVSIVTTTLEILISSFS*******AAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNA**
Disordered Region (DISOPRED)
**KFLVSYTWI***************CFAPVRSVH**********************************IVTTTLEIL*************************GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAIC
Disordered Region (DISEMBL)
MAKFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVTPKLT***********RREALTVSIVTTTLEILISSFS********AAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAIC
Disordered Region (DISPRO)
*AKFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVTPKLTA*****SLLSTRREALTVSIVTTTLEILISSFSASS********ELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAIC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAKFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVTPKLTANSSSSSLLSTRREALTVSIVTTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAIC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
O81864	229	Peptidyl-prolyl cis-trans	yes	no	0.794	0.606	0.5	1e-30
Q5RF88	457	Peptidyl-prolyl cis-trans	yes	no	0.417	0.159	0.353	6e-05
Q13451	457	Peptidyl-prolyl cis-trans	yes	no	0.428	0.164	0.345	6e-05
Q9XSH5	457	Peptidyl-prolyl cis-trans	N/A	no	0.405	0.155	0.35	0.0002
O22870	223	Peptidyl-prolyl cis-trans	no	no	0.651	0.511	0.286	0.0002
Q9XT11	457	Peptidyl-prolyl cis-trans	N/A	no	0.405	0.155	0.337	0.0003
Q9XSI2	457	Peptidyl-prolyl cis-trans	N/A	no	0.405	0.155	0.337	0.0003

>sp|O81864|FK171_ARATH Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-1 PE=2 SV=1

 Score =  132 bits (332), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/156 (50%), Positives = 103/156 (66%), Gaps = 17/156 (10%)

Query: 24  MIRCFAPVRSVHAFHNHTIRFVTPK------------LTANSSSSSLLSTRREALTVSIV 71
           MIRCFA    V A    T+ F +P              +++SSSS++ +  R ++++SI+
Sbjct: 1   MIRCFAWTPLVGAPLITTVHFTSPPSLRIFASRSSAPSSSSSSSSTVAAASRRSISLSII 60

Query: 72  TTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGR 131
             T     SS  +S   ++ A A+  E+PNSGGVKALDLR+G G VP++GDQ+ IHYYGR
Sbjct: 61  AVT-----SSVVSSFCFSSPALADFSEIPNSGGVKALDLRIGDGDVPIEGDQIEIHYYGR 115

Query: 132 LAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSP 167
           LAAKQGWRFDSTYDHKD +GE +PF F+LGS KV P
Sbjct: 116 LAAKQGWRFDSTYDHKDSNGEAVPFTFVLGSSKVIP 151

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 2EC: .EC: 1EC: .EC: 8

>sp|Q5RF88|FKBP5_PONAB Peptidyl-prolyl cis-trans isomerase FKBP5 OS=Pongo abelii GN=FKBP5 PE=2 SV=1

 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 9/82 (10%)

Query: 85  SSSAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST 143
           S +A  A   E +      GV  +  R+G G   P+ GD+V +HY G+L+   G +FDS+
Sbjct: 13  SPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSS 70

Query: 144 YDHKDQSGEPIPFLFILGSGKV 165
           +D  +      PF+F LG G+V
Sbjct: 71  HDRNE------PFVFSLGKGQV 86

Interacts with functionally mature heterooligomeric progesterone receptor complexes along with HSP90 and TEBP.

Pongo abelii (taxid: 9601)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q13451|FKBP5_HUMAN Peptidyl-prolyl cis-trans isomerase FKBP5 OS=Homo sapiens GN=FKBP5 PE=1 SV=2

 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 9/84 (10%)

Query: 83  SASSSAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFD 141
             S +A  A   E +      GV  +  R+G G   P+ GD+V +HY G+L+   G +FD
Sbjct: 11  EESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFD 68

Query: 142 STYDHKDQSGEPIPFLFILGSGKV 165
           S++D  +      PF+F LG G+V
Sbjct: 69  SSHDRNE------PFVFSLGKGQV 86

Interacts with functionally mature heterooligomeric progesterone receptor complexes along with HSP90 and TEBP.

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q9XSH5|FKBP5_SAIBB Peptidyl-prolyl cis-trans isomerase FKBP5 OS=Saimiri boliviensis boliviensis GN=FKBP5 PE=1 SV=1

 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 9/80 (11%)

Query: 87  SAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYD 145
           +A  A   E +      GV  +  R+G G   P+ GD+V +HY G+LA   G +FDS++D
Sbjct: 15  AATVAEQGEDVTSKKDRGVLKIVKRVGHGEETPMIGDRVYVHYNGKLA--NGKKFDSSHD 72

Query: 146 HKDQSGEPIPFLFILGSGKV 165
             +      PF+F +G G+V
Sbjct: 73  RNE------PFVFSIGKGQV 86

Interacts with functionally mature heterooligomeric progesterone receptor complexes along with HSP90 and TEBP (By similarity). Interacts with the glucocorticoid receptor and modulates its response to glucocorticoids.

Saimiri boliviensis boliviensis (taxid: 39432)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|O22870|FK163_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-3 PE=1 SV=2

 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 22/136 (16%)

Query: 43  RFVTPKLTANSSSSSLLSTRREALTVSIVTTTLEILISSFSASSSA----------AAAA 92
           R +  +    S   S LS+RREA+ + ++  +  + +SS +A ++            A  
Sbjct: 34  RVIASETREQSCKISNLSSRREAMLL-VLGVSGGLSMSSLAAYAAGLPPEDKPRLCEAEC 92

Query: 93  AAELLELP---NSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQ 149
             EL  +P      G++  D+++GRGP P  G QVA +Y   + +  G  FDS+ +    
Sbjct: 93  EKELENVPMVTTESGLQYKDIKVGRGPSPPVGFQVAANYVAMVPS--GQIFDSSLEKG-- 148

Query: 150 SGEPIPFLFILGSGKV 165
               +P+LF +GSG+V
Sbjct: 149 ----LPYLFRVGSGQV 160

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q9XT11|FKBP5_AOTNA Peptidyl-prolyl cis-trans isomerase FKBP5 OS=Aotus nancymaae GN=FKBP5 PE=2 SV=2

 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 9/80 (11%)

Query: 87  SAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYD 145
           +A  A   E +      GV  +  R+G G   P+ GD+V +HY G+L+   G +FDS++D
Sbjct: 15  TATVAEQGEDVTSKKDRGVLKIVKRVGHGEETPMIGDKVYVHYNGKLS--NGKKFDSSHD 72

Query: 146 HKDQSGEPIPFLFILGSGKV 165
             +      PF+F +G G+V
Sbjct: 73  RNE------PFVFSIGKGQV 86

Interacts with functionally mature heterooligomeric progesterone receptor complexes along with HSP90 and TEBP (By similarity). Interacts with the glucocorticoid receptor and modulates its response to glucocorticoids.

Aotus nancymaae (taxid: 37293)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q9XSI2|FKBP5_SAGOE Peptidyl-prolyl cis-trans isomerase FKBP5 OS=Saguinus oedipus GN=FKBP5 PE=2 SV=2

 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 9/80 (11%)

Query: 87  SAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYD 145
           +A  A   E +      GV  +  R+G G   P+ GD+V +HY G+L+   G +FDS++D
Sbjct: 15  AATVAEQGEDVTSKKDRGVLKIVKRVGHGEETPMIGDKVYVHYNGKLS--NGKKFDSSHD 72

Query: 146 HKDQSGEPIPFLFILGSGKV 165
             +      PF+F +G G+V
Sbjct: 73  RNE------PFVFSIGKGQV 86

Interacts with functionally mature heterooligomeric progesterone receptor complexes along with HSP90 and TEBP (By similarity). Interacts with the glucocorticoid receptor and modulates its response to glucocorticoids.

Saguinus oedipus (taxid: 9490)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
225423674	220	PREDICTED: probable FKBP-type peptidyl-p	0.771	0.613	0.585	8e-35
449522925	225	PREDICTED: peptidyl-prolyl cis-trans iso	0.571	0.444	0.619	2e-30
297800068	229	hypothetical protein ARALYDRAFT_492887 [	0.822	0.628	0.529	4e-30
449455431	225	PREDICTED: peptidyl-prolyl cis-trans iso	0.571	0.444	0.609	1e-29
15235203	229	FKBP-like peptidyl-prolyl cis-trans isom	0.794	0.606	0.5	5e-29
357136937	206	PREDICTED: FK506-binding protein 4-like	0.388	0.330	0.823	3e-28
356537045	232	PREDICTED: 39 kDa FK506-binding nuclear	0.588	0.443	0.563	8e-28
326488763	207	predicted protein [Hordeum vulgare subsp	0.4	0.338	0.8	1e-27
242064146	207	hypothetical protein SORBIDRAFT_04g00462	0.411	0.347	0.777	2e-27
413926453	209	putative FKBP-type peptidyl-prolyl cis-t	0.411	0.344	0.75	7e-27

>gi|225423674|ref|XP_002276516.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase 7, chloroplastic [Vitis vinifera] gi|297737981|emb|CBI27182.3| unnamed protein product [Vitis vinifera]

 Score =  151 bits (382), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/147 (58%), Positives = 104/147 (70%), Gaps = 12/147 (8%)

Query: 24  MIRCFAPVRSVHAFHNHTIRFVTPK----LTANSSSSSLLSTRREALTVSIVTTTLEILI 79
           +IR  AP  ++   H+ T RF  PK    + A SSS +  ST R AL++S++        
Sbjct: 3   IIRWCAPPPTLLLPHHPTARFSCPKPPSVVYAKSSSPASSSTTRRALSLSLI-------F 55

Query: 80  SSFSASS-SAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGW 138
           SSF+ S  S++ AA +E  EL  SGGVKALDLR G G VPVDGDQVA+HYYGRLAAKQGW
Sbjct: 56  SSFTCSYYSSSEAATSEFFELQGSGGVKALDLRTGSGEVPVDGDQVAVHYYGRLAAKQGW 115

Query: 139 RFDSTYDHKDQSGEPIPFLFILGSGKV 165
           RFDSTYDHKD++GEPIPF+F LGSGKV
Sbjct: 116 RFDSTYDHKDETGEPIPFVFTLGSGKV 142

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522925|ref|XP_004168476.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic-like [Cucumis sativus]

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/105 (61%), Positives = 83/105 (79%), Gaps = 5/105 (4%)

Query: 63  REALTVSIVTTTLEILISSFSASSSAAAA--AAAELLELPNSGGVKALDLRLGRGPVPVD 120
           R AL+ S + +T    IS+F +SS AA +  AA +  +LP+S GVKAL+LR+G G  P+D
Sbjct: 37  RRALSFSALISTA---ISTFPSSSFAAPSKSAAPDFFDLPDSAGVKALELRIGSGETPID 93

Query: 121 GDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV 165
           GDQV +HYYGRLAAKQGWRFD+TYDHKD++GEP+PF F+LGSGKV
Sbjct: 94  GDQVVVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFTFVLGSGKV 138

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800068|ref|XP_002867918.1| hypothetical protein ARALYDRAFT_492887 [Arabidopsis lyrata subsp. lyrata] gi|297313754|gb|EFH44177.1| hypothetical protein ARALYDRAFT_492887 [Arabidopsis lyrata subsp. lyrata]

 Score =  136 bits (342), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/151 (52%), Positives = 102/151 (67%), Gaps = 7/151 (4%)

Query: 24  MIRCFAPVRSVHAFHNHTIRFVTP---KLTANSSSSSLLSTRREALTVSIVTTTLEILI- 79
           MIRCFA +  + A    T+ F +P   ++ A+ S SS  S+   + TV+    ++ + I 
Sbjct: 1   MIRCFARIPLIGAPFISTVHFTSPPSIRIFASRSPSSSSSSSSSSSTVAASRRSISLTII 60

Query: 80  ---SSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQ 136
              SS  +S S ++ A AE  E+PNSGGVKALDLR G G VP++GDQ+ IHYYGRLAAKQ
Sbjct: 61  AVTSSVVSSVSFSSPALAEFSEIPNSGGVKALDLRTGDGEVPIEGDQIEIHYYGRLAAKQ 120

Query: 137 GWRFDSTYDHKDQSGEPIPFLFILGSGKVSP 167
           GWRFDSTYDHKD +GE +PF FILGS KV P
Sbjct: 121 GWRFDSTYDHKDSNGEAVPFTFILGSSKVIP 151

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455431|ref|XP_004145456.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic-like [Cucumis sativus]

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/105 (60%), Positives = 82/105 (78%), Gaps = 5/105 (4%)

Query: 63  REALTVSIVTTTLEILISSFSASSSAAAA--AAAELLELPNSGGVKALDLRLGRGPVPVD 120
           R AL+ S + +T    IS+F +SS AA +  AA +  +LP+S GVKAL+LR G G  P+D
Sbjct: 37  RRALSFSALISTA---ISTFPSSSFAAPSKSAAPDFFDLPDSAGVKALELRTGSGETPID 93

Query: 121 GDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV 165
           GDQV +HYYGRLAAKQGWRFD+TYDHKD++G+P+PF F+LGSGKV
Sbjct: 94  GDQVVVHYYGRLAAKQGWRFDTTYDHKDENGDPLPFTFVLGSGKV 138

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235203|ref|NP_193718.1| FKBP-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] gi|75100452|sp|O81864.1|FK171_ARATH RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic; Short=PPIase FKBP17-1; AltName: Full=FK506-binding protein 17-1; Short=AtFKBP17-1; AltName: Full=Immunophilin FKBP17-1; AltName: Full=Rotamase; Flags: Precursor gi|3250692|emb|CAA19700.1| putative protein [Arabidopsis thaliana] gi|6686800|emb|CAB64722.1| FKBP like protein [Arabidopsis thaliana] gi|7268779|emb|CAB78985.1| putative protein [Arabidopsis thaliana] gi|88196737|gb|ABD43011.1| At4g19830 [Arabidopsis thaliana] gi|332658831|gb|AEE84231.1| FKBP-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/156 (50%), Positives = 103/156 (66%), Gaps = 17/156 (10%)

Query: 24  MIRCFAPVRSVHAFHNHTIRFVTPK------------LTANSSSSSLLSTRREALTVSIV 71
           MIRCFA    V A    T+ F +P              +++SSSS++ +  R ++++SI+
Sbjct: 1   MIRCFAWTPLVGAPLITTVHFTSPPSLRIFASRSSAPSSSSSSSSTVAAASRRSISLSII 60

Query: 72  TTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGR 131
             T     SS  +S   ++ A A+  E+PNSGGVKALDLR+G G VP++GDQ+ IHYYGR
Sbjct: 61  AVT-----SSVVSSFCFSSPALADFSEIPNSGGVKALDLRIGDGDVPIEGDQIEIHYYGR 115

Query: 132 LAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSP 167
           LAAKQGWRFDSTYDHKD +GE +PF F+LGS KV P
Sbjct: 116 LAAKQGWRFDSTYDHKDSNGEAVPFTFVLGSSKVIP 151

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357136937|ref|XP_003570059.1| PREDICTED: FK506-binding protein 4-like [Brachypodium distachyon]

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 56/68 (82%), Positives = 64/68 (94%)

Query: 98  ELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFL 157
           E+P+SGGVKALDLR G G +PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKD+SG+P+PF+
Sbjct: 60  EIPSSGGVKALDLRDGSGEIPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDESGDPMPFV 119

Query: 158 FILGSGKV 165
           F +GSGKV
Sbjct: 120 FTIGSGKV 127

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537045|ref|XP_003537041.1| PREDICTED: 39 kDa FK506-binding nuclear protein-like [Glycine max]

 Score =  128 bits (322), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 80/110 (72%), Gaps = 7/110 (6%)

Query: 63  REALTVSIVTTTLEILISSFSASSSAAAAA-------AAELLELPNSGGVKALDLRLGRG 115
           R  L++S+++TT    I S    + ++++         ++  E+PNSGGVKAL+L  G G
Sbjct: 45  RRPLSLSLISTTFSAFIFSLPPPAPSSSSPFPSSKFPVSKFFEIPNSGGVKALELLDGSG 104

Query: 116 PVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV 165
            VP DGDQVAIHYYGRLAAKQGWRFDSTYDHKD +G+P PF+F+LGSGKV
Sbjct: 105 EVPSDGDQVAIHYYGRLAAKQGWRFDSTYDHKDNNGDPNPFVFVLGSGKV 154

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326488763|dbj|BAJ97993.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/70 (80%), Positives = 63/70 (90%)

Query: 98  ELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFL 157
           E+P+SGGVKAL+LR G G VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKD +G+PIPF+
Sbjct: 61  EIPSSGGVKALELREGSGEVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDATGDPIPFV 120

Query: 158 FILGSGKVSP 167
           F +GSG V P
Sbjct: 121 FTIGSGNVIP 130

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242064146|ref|XP_002453362.1| hypothetical protein SORBIDRAFT_04g004620 [Sorghum bicolor] gi|102139873|gb|ABF70026.1| peptidylprolyl isomerase, FKBP-type family protein [Musa acuminata] gi|241933193|gb|EES06338.1| hypothetical protein SORBIDRAFT_04g004620 [Sorghum bicolor]

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/72 (77%), Positives = 62/72 (86%)

Query: 98  ELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFL 157
           E+P SGGVKALDLR G G +PV GDQVAIHYYGRLAAKQGWRFDSTYDHKD +G+P+PF+
Sbjct: 61  EIPGSGGVKALDLRDGSGEIPVVGDQVAIHYYGRLAAKQGWRFDSTYDHKDDTGDPMPFV 120

Query: 158 FILGSGKVSPNF 169
           F LGSGKV P  
Sbjct: 121 FTLGSGKVIPGM 132

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413926453|gb|AFW66385.1| putative FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Zea mays]

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 54/72 (75%), Positives = 62/72 (86%)

Query: 98  ELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFL 157
           E+P SGGVKALDLR G G +P  GDQVA+HYYGRLAAKQGWRFDSTYDHKD++G+P+PF+
Sbjct: 63  EIPGSGGVKALDLREGSGEIPAVGDQVAVHYYGRLAAKQGWRFDSTYDHKDETGDPMPFV 122

Query: 158 FILGSGKVSPNF 169
           F LGSGKV P  
Sbjct: 123 FTLGSGKVIPGM 134

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
TAIR|locus:2134035	229	AT4G19830 "AT4G19830" [Arabido	0.794	0.606	0.448	1e-29
UNIPROTKB|Q6H6D3	213	P0669G09.14 "Peptidyl-prolyl c	0.577	0.474	0.556	2.8e-27
UNIPROTKB|Q74AS7	156	GSU2274 "Peptidyl-prolyl cis-t	0.342	0.384	0.397	1e-06
TIGR_CMR|GSU_2274	156	GSU_2274 "FKBP-type peptidyl-p	0.342	0.384	0.397	1e-06
DICTYBASE|DDB_G0295681	111	DDB_G0295681 "FKBP-type peptid	0.32	0.504	0.354	0.0001
UNIPROTKB|P73037	201	ytfC "Peptidyl-prolyl cis-tran	0.308	0.268	0.387	0.00014
UNIPROTKB|A8JEI4	181	FKB16-8 "Peptidyl-prolyl cis-t	0.382	0.370	0.36	0.00029
UNIPROTKB|Q8F361	129	fkpA "Peptidyl-prolyl cis-tran	0.28	0.379	0.385	0.00043
UNIPROTKB|Q7NMC5	161	glr0841 "Peptidyl-prolyl cis-t	0.32	0.347	0.390	0.00049

TAIR|locus:2134035 AT4G19830 "AT4G19830" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 70/156 (44%), Positives = 92/156 (58%)

Query:    24 MIRCFA--P------VRSVHAFHNHTIRFVTPKLTANXXXXXXXXT----RREALTVSIV 71
             MIRCFA  P      + +VH     ++R    + +A         T     R ++++SI+
Sbjct:     1 MIRCFAWTPLVGAPLITTVHFTSPPSLRIFASRSSAPSSSSSSSSTVAAASRRSISLSII 60

Query:    72 TTTLEILIXXXXXXXXXXXXXXXELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGR 131
               T  ++                +  E+PNSGGVKALDLR+G G VP++GDQ+ IHYYGR
Sbjct:    61 AVTSSVV-----SSFCFSSPALADFSEIPNSGGVKALDLRIGDGDVPIEGDQIEIHYYGR 115

Query:   132 LAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSP 167
             LAAKQGWRFDSTYDHKD +GE +PF F+LGS KV P
Sbjct:   116 LAAKQGWRFDSTYDHKDSNGEAVPFTFVLGSSKVIP 151

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IBA

GO:0005528 "FK506 binding" evidence=ISS;IBA

GO:0006457 "protein folding" evidence=IEA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0016020 "membrane" evidence=IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

UNIPROTKB|Q6H6D3 P0669G09.14 "Peptidyl-prolyl cis-trans isomerase" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 59/106 (55%), Positives = 69/106 (65%)

Query:    62 RREALTVSIVTTTLEILIXXXXXXXXXXXXXXXELLELPNSGGVKALDLRLGRGPVPVDG 121
             RR  L  S  +T     +                  E+P SGGVKALDLR G G VP DG
Sbjct:    36 RRHLLLASAAST-----LPAAAAAASASAAAAPSFAEIPGSGGVKALDLREGPGEVPADG 90

Query:   122 DQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSP 167
             DQVAIHYYGRLAAKQGWRFDSTYDHKD++G+P+PF+F +G+G V P
Sbjct:    91 DQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVFTVGAGNVIP 136

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|Q74AS7 GSU2274 "Peptidyl-prolyl cis-trans isomerase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 27/68 (39%), Positives = 39/68 (57%)

Query:   102 SGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILG 161
             + G+  +DL  G G  PV G  V +HY G L  + G +FDS+ D     GEP  F+F +G
Sbjct:    48 ASGLSYVDLAAGSGAAPVAGKPVKVHYTGWL--ENGTKFDSSVDR----GEP--FVFTIG 99

Query:   162 SGKVSPNF 169
             +G+V P +
Sbjct:   100 AGEVIPGW 107

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

TIGR_CMR|GSU_2274 GSU_2274 "FKBP-type peptidyl-prolyl cis-trans isomerase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 27/68 (39%), Positives = 39/68 (57%)

Query:   102 SGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILG 161
             + G+  +DL  G G  PV G  V +HY G L  + G +FDS+ D     GEP  F+F +G
Sbjct:    48 ASGLSYVDLAAGSGAAPVAGKPVKVHYTGWL--ENGTKFDSSVDR----GEP--FVFTIG 99

Query:   162 SGKVSPNF 169
             +G+V P +
Sbjct:   100 AGEVIPGW 107

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0006457 "protein folding" evidence=ISS

DICTYBASE|DDB_G0295681 DDB_G0295681 "FKBP-type peptidylprolyl cis-trans isomerase domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query:   104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSG 163
             G+ +  +R G G   + G+ V +HY G+L   +G +FDS+   +D+S    PF F+LG+ 
Sbjct:     3 GIVSKLIRQGTGKQALKGNLVTVHYTGKLDNNEGKKFDSS---RDRS---TPFSFVLGNS 56

Query:   164 KV 165
             +V
Sbjct:    57 QV 58

GO:0006457 "protein folding" evidence=IEA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0016020 "membrane" evidence=IBA

GO:0005528 "FK506 binding" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA;IBA

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IEA;IBA

GO:0016853 "isomerase activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|P73037 ytfC "Peptidyl-prolyl cis-trans isomerase" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)]

 Score = 104 (41.7 bits), Expect = 0.00014, P = 0.00014
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query:   104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSG 163
             G++ +D  +G GP P  G +V +HY GRL    G +FDS+ D         PF F +G G
Sbjct:    96 GLQYIDEVVGEGPSPTKGQKVEVHYTGRLT--DGTKFDSSVDRNK------PFTFTIGVG 147

Query:   164 KV 165
             +V
Sbjct:   148 QV 149

GO:0030288 "outer membrane-bounded periplasmic space" evidence=IDA

UNIPROTKB|A8JEI4 FKB16-8 "Peptidyl-prolyl cis-trans isomerase" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 101 (40.6 bits), Expect = 0.00029, P = 0.00029
 Identities = 27/75 (36%), Positives = 39/75 (52%)

Query:    95 ELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPI 154
             + + LP+  G+K L +R G G  P  GD V +H+ G     QG R D+T   +D+     
Sbjct:    23 DFVTLPS--GIKVLTIREGEGATPQPGDTVEVHWAGFTKGYQGKRIDNT-SVRDE----- 74

Query:   155 PFLFILGSGKVSPNF 169
             P+ F LGSG+    F
Sbjct:    75 PYEFKLGSGQAIKAF 89

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|Q8F361 fkpA "Peptidyl-prolyl cis-trans isomerase" [Leptospira interrogans serovar Lai str. 56601 (taxid:189518)]

 Score = 92 (37.4 bits), Expect = 0.00043, P = 0.00043
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query:   109 DLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV 165
             ++R+G G     G  V +HY G L    G +FDS+ D K+      PF F LG+G+V
Sbjct:    29 EIRIGTGKEAFSGSNVTVHYVGTLT--NGKKFDSSRDRKN------PFTFNLGAGEV 77

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|Q7NMC5 glr0841 "Peptidyl-prolyl cis-trans isomerase" [Gloeobacter violaceus PCC 7421 (taxid:251221)]

 Score = 98 (39.6 bits), Expect = 0.00049, P = 0.00049
 Identities = 25/64 (39%), Positives = 36/64 (56%)

Query:   102 SGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILG 161
             + G+K LD  +G G  P  G +V +HY G L  + G +FDS+ D     G+P  F F +G
Sbjct:    54 TSGLKYLDETVGNGASPQKGQRVTVHYTGTL--EDGKKFDSSRDR----GQP--FSFTIG 105

Query:   162 SGKV 165
              G+V
Sbjct:   106 VGQV 109


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.140   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      175       152   0.00073  105 3  11 22  0.44    31
                                                     30  0.40    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  144 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.33u 0.22s 11.55t   Elapsed:  00:00:01
  Total cpu time:  11.33u 0.22s 11.55t   Elapsed:  00:00:01
  Start:  Sat May 11 05:50:06 2013   End:  Sat May 11 05:50:07 2013

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	175
pfam00254	94	pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-t	3e-07
COG0545	205	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans	7e-07

>gnl|CDD|215821 pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-trans isomerase

 Score = 46.1 bits (110), Expect = 3e-07
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 8/52 (15%)

Query: 118 PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNF 169
              GD V +HY G+L  + G  FDS+ D         PF F LGSG+V P +
Sbjct: 5   AKKGDTVTVHYTGKL--EDGTVFDSSKDRGK------PFEFTLGSGQVIPGW 48

Length = 94

>gnl|CDD|223619 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 47.0 bits (112), Expect = 7e-07
 Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 15/85 (17%)

Query: 81  SFSASSSAAAAAAAE--LLELPNSGGVKAL-------DLRLGRGPVPVDGDQVAIHYYGR 131
           +  A  +AA AA  +  L +     GVK L        L+ G G  P  GD V +HY G 
Sbjct: 70  AKRAKDAAANAAEGKAFLEKNAKEKGVKTLPSGLQYKVLKAGDGAAPKKGDTVTVHYTGT 129

Query: 132 LAAKQGWRFDSTYDHKDQSGEPIPF 156
           L    G  FDS+YD     G+P  F
Sbjct: 130 LI--DGTVFDSSYD----RGQPAEF 148

Length = 205

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
KOG0544	108	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.69
COG0545	205	FkpA FKBP-type peptidyl-prolyl cis-trans isomerase	99.66
PRK11570	206	peptidyl-prolyl cis-trans isomerase; Provisional	99.5
KOG0549	188	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.48
KOG0552	226	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.41
PRK10902	269	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	99.34
TIGR03516	177	ppisom_GldI peptidyl-prolyl isomerase, gliding mot	99.31
PF00254	94	FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomer	98.97
PRK15095	156	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	98.92
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	97.78
TIGR00115	408	tig trigger factor. Trigger factor is a ribosome-a	97.12
PRK01490	435	tig trigger factor; Provisional	97.07
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	96.63
COG0544	441	Tig FKBP-type peptidyl-prolyl cis-trans isomerase	96.62
KOG0545	329	consensus Aryl-hydrocarbon receptor-interacting pr	95.39
COG1047	174	SlpA FKBP-type peptidyl-prolyl cis-trans isomerase	93.49

>KOG0544 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.69  E-value=6.6e-17  Score=120.98  Aligned_cols=63  Identities=35%  Similarity=0.637  Sum_probs=59.0

Q ss_pred             CeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       104 Gv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      |+.++++..|+|. .|+.||+|.+||+|.|.  ||++||||.+++.      ||.|++|.|+||+||||++.
T Consensus         2 Gv~~~~i~~Gdg~tfpK~Gqtvt~hYtg~L~--dG~kfDSs~dr~k------Pfkf~IGkgeVIkGwdegv~   65 (108)
T KOG0544|consen    2 GVEKQVISPGDGRTFPKKGQTVTVHYTGTLQ--DGKKFDSSRDRGK------PFKFKIGKGEVIKGWDEGVA   65 (108)
T ss_pred             CceeEEeeCCCCcccCCCCCEEEEEEEeEec--CCcEeecccccCC------CeeEEecCcceeechhhcch
Confidence            6899999999995 59999999999999999  6999999999864      99999999999999999975

>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

Probab=99.66  E-value=1.9e-16  Score=131.90  Aligned_cols=74  Identities=34%  Similarity=0.530  Sum_probs=64.4

Q ss_pred             HHHhcccceecCCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHh
Q 030561           89 AAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPN  168 (175)
Q Consensus        89 ~~~~~~~~~~l~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG  168 (175)
                      .++.+..+..  .++|++|++++.|+|+.|+.+|+|.|||+|+|.  ||++|||||+++    +  |+.|.||  +||+|
T Consensus        89 ~~~k~~~v~~--~~sgl~y~~~~~G~G~~~~~~~~V~vhY~G~l~--~G~vFDsS~~rg----~--p~~f~l~--~vI~G  156 (205)
T COG0545          89 KNAKEKGVKT--LPSGLQYKVLKAGDGAAPKKGDTVTVHYTGTLI--DGTVFDSSYDRG----Q--PAEFPLG--GVIPG  156 (205)
T ss_pred             hhcccCCceE--CCCCcEEEEEeccCCCCCCCCCEEEEEEEEecC--CCCccccccccC----C--CceeecC--Ceeeh
Confidence            3333444444  559999999999999999999999999999999  699999999986    3  9999997  99999


Q ss_pred             HHhhhc
Q 030561          169 FLVNAI  174 (175)
Q Consensus       169 ~eeALi  174 (175)
                      |++||.
T Consensus       157 w~egl~  162 (205)
T COG0545         157 WDEGLQ  162 (205)
T ss_pred             HHHHHh
Confidence            999984

>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.50  E-value=9.3e-14  Score=115.65  Aligned_cols=78  Identities=27%  Similarity=0.411  Sum_probs=69.0

Q ss_pred             cHHHHHhcccceecCCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCc
Q 030561           86 SSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV  165 (175)
Q Consensus        86 ~~~~~~~~~~~~~l~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqV  165 (175)
                      +.+.++.++++..+  ++|++|+++++|+|..|+.+|.|.|||+|++.  ||++|||||+++    +  |+.|.+|  ++
T Consensus        87 fl~~~~k~~gv~~t--~sGl~y~vi~~G~G~~p~~~d~V~v~Y~g~l~--dG~vfdss~~~g----~--P~~f~l~--~v  154 (206)
T PRK11570         87 FLEENAKKEGVNST--ESGLQFRVLTQGEGAIPARTDRVRVHYTGKLI--DGTVFDSSVARG----E--PAEFPVN--GV  154 (206)
T ss_pred             HHHHhhhcCCcEEC--CCCcEEEEEeCCCCCCCCCCCEEEEEEEEEEC--CCCEEEeccCCC----C--CeEEEee--ch
Confidence            66777778888765  49999999999999999999999999999998  699999999875    3  9999996  79


Q ss_pred             cHhHHhhhcC
Q 030561          166 SPNFLVNAIC  175 (175)
Q Consensus       166 IpG~eeALi~  175 (175)
                      |+||+++|.+
T Consensus       155 ipG~~eaL~~  164 (206)
T PRK11570        155 IPGWIEALTL  164 (206)
T ss_pred             hhHHHHHHcC
Confidence            9999999863

>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.48  E-value=1.2e-13  Score=113.66  Aligned_cols=66  Identities=29%  Similarity=0.513  Sum_probs=59.2

Q ss_pred             CCCCeEEEEeEcCCC--CCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          101 NSGGVKALDLRLGRG--PVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G--~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      +.+++++.++++-+.  .+.+.||+|.+||+|.+.  ||++|||||++++      |++|+||.|+||+|||++|+
T Consensus        66 ~~~~l~I~v~~~p~~C~~kak~GD~l~~HY~g~le--DGt~fdSS~~rg~------P~~f~LG~gqVIkG~Dqgl~  133 (188)
T KOG0549|consen   66 PDEELQIGVLKKPEECPEKAKKGDTLHVHYTGSLE--DGTKFDSSYSRGA------PFTFTLGTGQVIKGWDQGLL  133 (188)
T ss_pred             CCCceeEEEEECCccccccccCCCEEEEEEEEEec--CCCEEeeeccCCC------CEEEEeCCCceeccHhHHhh
Confidence            568899999988653  469999999999999998  7999999999964      99999999999999999985

>KOG0552 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.41  E-value=3.9e-13  Score=113.74  Aligned_cols=66  Identities=41%  Similarity=0.743  Sum_probs=62.0

Q ss_pred             CCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEE-EEeCCCCccHhHHhhh
Q 030561          100 PNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFL-FILGSGKVSPNFLVNA  173 (175)
Q Consensus       100 ~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~-F~LG~GqVIpG~eeAL  173 (175)
                      +.++||+|++++.|+|+.+..|+.|.+||+|++.. +|++||+++..+       |+. |.+|.++||+|||.++
T Consensus       117 tl~~Gl~y~D~~vG~G~~a~~G~rV~v~Y~Gkl~~-~GkvFd~~~~~k-------p~~~f~lg~g~VIkG~d~gv  183 (226)
T KOG0552|consen  117 TLPGGLRYEDLRVGSGPSAKKGKRVSVRYIGKLKG-NGKVFDSNFGGK-------PFKLFRLGSGEVIKGWDVGV  183 (226)
T ss_pred             ecCCCcEEEEEEecCCCCCCCCCEEEEEEEEEecC-CCeEeecccCCC-------CccccccCCCCCCchHHHhh
Confidence            45799999999999999999999999999999996 799999999875       899 9999999999999987

>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.34  E-value=4.5e-12  Score=109.57  Aligned_cols=77  Identities=29%  Similarity=0.418  Sum_probs=67.8

Q ss_pred             cHHHHHhcccceecCCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCc
Q 030561           86 SSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV  165 (175)
Q Consensus        86 ~~~~~~~~~~~~~l~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqV  165 (175)
                      |.+.++.+.++..  .++|++|+++++|+|..|+.||.|.|||.|++.  ||++||++++++    .  |+.|.++  ++
T Consensus       131 fl~~~~k~~gv~~--t~sGl~y~Vi~~G~G~~p~~gD~V~V~Y~g~l~--dG~vfdss~~~g----~--p~~f~l~--~v  198 (269)
T PRK10902        131 YREKFAKEKGVKT--TSTGLLYKVEKEGTGEAPKDSDTVVVNYKGTLI--DGKEFDNSYTRG----E--PLSFRLD--GV  198 (269)
T ss_pred             HHHHhccCCCcEE--CCCccEEEEEeCCCCCCCCCCCEEEEEEEEEeC--CCCEeeccccCC----C--ceEEecC--Cc
Confidence            5667777777776  459999999999999999999999999999998  699999999875    3  9999985  79


Q ss_pred             cHhHHhhhc
Q 030561          166 SPNFLVNAI  174 (175)
Q Consensus       166 IpG~eeALi  174 (175)
                      ||||+++|.
T Consensus       199 ipG~~EaL~  207 (269)
T PRK10902        199 IPGWTEGLK  207 (269)
T ss_pred             chHHHHHHh
Confidence            999999985

>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated

Probab=99.31  E-value=1e-11  Score=101.26  Aligned_cols=67  Identities=18%  Similarity=0.131  Sum_probs=60.0

Q ss_pred             cCCCCCeEEEEeEc--CCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561           99 LPNSGGVKALDLRL--GRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus        99 l~~~sGv~~~iLk~--G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .++++|+.|.++++  |+|..|+.||.|.+||++++.  ||++|+++++.+       |+.|.+|.+++|+||+++|.
T Consensus        65 ~~t~sGl~Y~v~~~~~g~g~~p~~gd~V~v~Y~~~~~--dG~v~~ss~~~~-------P~~f~vg~~~vi~Gl~e~L~  133 (177)
T TIGR03516        65 ETSQNGFWYYYNQKDTGEGTTPEFGDLVTFEYDIRAL--DGDVIYSEEELG-------PQTYKVDQQDLFSGLRDGLK  133 (177)
T ss_pred             eECCCccEEEEEEecCCCCCcCCCCCEEEEEEEEEeC--CCCEEEeCCCCC-------CEEEEeCCcchhHHHHHHHc
Confidence            55789999999977  667789999999999999999  699999998642       99999999999999999985

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.

>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5

Probab=98.97  E-value=1.5e-09  Score=77.91  Aligned_cols=50  Identities=52%  Similarity=0.872  Sum_probs=45.7

Q ss_pred             CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          117 VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       117 ~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      +|+.||.|.+||++++.  +|++|+++++.+    .  |+.|.+|.+++|+||+++|+
T Consensus         4 ~~~~gd~V~i~y~~~~~--~g~~~~~~~~~~----~--~~~~~~g~~~~i~g~e~al~   53 (94)
T PF00254_consen    4 TPKEGDTVTIHYTGRLE--DGKVFDSSYQEG----E--PFEFRLGSGQVIPGLEEALI   53 (94)
T ss_dssp             SBSTTSEEEEEEEEEET--TSEEEEETTTTT----S--EEEEETTSSSSSHHHHHHHT
T ss_pred             cCCCCCEEEEEEEEEEC--CCcEEEEeeecC----c--ceeeeeccCccccchhhhcc
Confidence            49999999999999998  699999998764    3  99999999999999999986

2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....

>PRK15095 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=98.92  E-value=2.6e-09  Score=85.49  Aligned_cols=50  Identities=26%  Similarity=0.400  Sum_probs=45.5

Q ss_pred             CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          117 VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       117 ~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      +++.||+|.+||++++.  ||++||||++.+    +  |+.|.+|.|++|+||+++|+
T Consensus         4 ~i~~~~~V~v~Y~~~~~--dG~v~dst~~~~----~--P~~f~~G~g~vi~gle~aL~   53 (156)
T PRK15095          4 SVQSNSAVLVHFTLKLD--DGSTAESTRNNG----K--PALFRLGDGSLSEGLEQQLL   53 (156)
T ss_pred             ccCCCCEEEEEEEEEeC--CCCEEEECCCCC----C--CEEEEeCCCCccHHHHHHHc
Confidence            57899999999999997  699999998754    3  99999999999999999986

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=97.78  E-value=7.3e-05  Score=68.15  Aligned_cols=60  Identities=30%  Similarity=0.423  Sum_probs=51.9

Q ss_pred             CCCeEEEEeEcCCC--CCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCC-CCccHhHHhhh
Q 030561          102 SGGVKALDLRLGRG--PVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGS-GKVSPNFLVNA  173 (175)
Q Consensus       102 ~sGv~~~iLk~G~G--~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~-GqVIpG~eeAL  173 (175)
                      +++|.++++++|.|  ..|.+|..|.|||.|++.  ++ +|+++.       .  .|.|.+|. ..||.|||.+|
T Consensus        83 Dg~iiKriir~G~gd~~~P~~g~~V~v~~~G~~~--~~-~f~~~~-------~--~fe~~~Ge~~~vi~Gle~al  145 (397)
T KOG0543|consen   83 DGGIIKRIIREGEGDYSRPNKGAVVKVHLEGELE--DG-VFDQRE-------L--RFEFGEGEDIDVIEGLEIAL  145 (397)
T ss_pred             CCceEEeeeecCCCCCCCCCCCcEEEEEEEEEEC--Cc-ceeccc-------c--ceEEecCCccchhHHHHHHH
Confidence            89999999999999  579999999999999998  35 777542       2  68899988 58999999987

>TIGR00115 tig trigger factor

Probab=97.12  E-value=0.0009  Score=60.02  Aligned_cols=48  Identities=29%  Similarity=0.507  Sum_probs=41.0

Q ss_pred             CCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          116 PVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       116 ~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .+++.||.|.++|+++.   +|+.|+++...        |+.|.+|.+.+++||+++|+
T Consensus       145 ~~~~~gD~V~v~~~~~~---dg~~~~~~~~~--------~~~~~lg~~~~~~~~ee~L~  192 (408)
T TIGR00115       145 RAAEKGDRVTIDFEGFI---DGEAFEGGKAE--------NFSLELGSGQFIPGFEEQLV  192 (408)
T ss_pred             cccCCCCEEEEEEEEEE---CCEECcCCCCC--------CeEEEECCCCcchhHHHHhC
Confidence            45789999999999976   48898876432        89999999999999999986

Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.

>PRK01490 tig trigger factor; Provisional

Probab=97.07  E-value=0.0011  Score=60.15  Aligned_cols=47  Identities=30%  Similarity=0.572  Sum_probs=40.5

Q ss_pred             CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          117 VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       117 ~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .++.||.|.++|.|+.   +|+.|+++...        ++.|.+|.+++++||+++|+
T Consensus       157 ~~~~gD~V~vd~~~~~---~g~~~~~~~~~--------~~~~~lg~~~~~~~fee~L~  203 (435)
T PRK01490        157 PAENGDRVTIDFVGSI---DGEEFEGGKAE--------DFSLELGSGRFIPGFEEQLV  203 (435)
T ss_pred             cCCCCCEEEEEEEEEE---CCEECcCCCCC--------ceEEEEcCCCcchhHHHHhC
Confidence            4789999999999997   48888865432        79999999999999999986

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=96.63  E-value=0.0018  Score=59.21  Aligned_cols=33  Identities=45%  Similarity=0.884  Sum_probs=30.1

Q ss_pred             EcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccc
Q 030561          111 RLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYD  145 (175)
Q Consensus       111 k~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d  145 (175)
                      ++|+|. .|..||.|.+||+|++.  ||+.||||.+
T Consensus         1 ~eg~g~~~p~~g~~v~~hytg~l~--dgt~fdss~d   34 (397)
T KOG0543|consen    1 KEGTGTETPMTGDKVEVHYTGTLL--DGTKFDSSRD   34 (397)
T ss_pred             CCCCCccCCCCCceeEEEEeEEec--CCeecccccC
Confidence            478896 49999999999999999  6999999988

>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]

Probab=96.62  E-value=0.0031  Score=58.31  Aligned_cols=46  Identities=30%  Similarity=0.570  Sum_probs=39.2

Q ss_pred             CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          118 PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       118 p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      ++.||.|+|.|.|+.   ||..|...-..        -|.|.||+|++||||+++||
T Consensus       158 a~~gD~v~IDf~g~i---Dg~~fegg~ae--------~~~l~lGs~~fipgFe~~Lv  203 (441)
T COG0544         158 AENGDRVTIDFEGSV---DGEEFEGGKAE--------NFSLELGSGRFIPGFEDQLV  203 (441)
T ss_pred             cccCCEEEEEEEEEE---cCeeccCcccc--------CeEEEEcCCCchhhHHhhhc
Confidence            889999999999975   58888754332        58999999999999999987

>KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones]

Probab=95.39  E-value=0.019  Score=50.62  Aligned_cols=67  Identities=22%  Similarity=0.251  Sum_probs=55.7

Q ss_pred             CCCCeEEEEeEcCCCC--CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhh
Q 030561          101 NSGGVKALDLRLGRGP--VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNA  173 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~--~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeAL  173 (175)
                      ...||+++++..|+|+  ...+|..|.+||.....+..++++|+|+..+    .  |....+|.-=-++-||.-|
T Consensus         8 ~~~gv~Kril~~G~g~l~e~~dGTrv~FHfrtl~~~e~~tviDDsRk~g----k--PmeiiiGkkFkL~VwE~il   76 (329)
T KOG0545|consen    8 NVEGVKKRILHGGTGELPEFIDGTRVIFHFRTLKCDEERTVIDDSRKVG----K--PMEIIIGKKFKLEVWEIIL   76 (329)
T ss_pred             cchhhhHhhccCCCccCccccCCceEEEEEEecccCcccccccchhhcC----C--CeEEeeccccccHHHHHHH
Confidence            5689999999999996  4789999999999987653578999998765    3  9999999876788887643

>COG1047 SlpA FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]

Probab=93.49  E-value=0.1  Score=43.08  Aligned_cols=27  Identities=30%  Similarity=0.412  Sum_probs=24.4

Q ss_pred             CCCCCCeEEEEEEEEEeCCCCcEEecccc
Q 030561          117 VPVDGDQVAIHYYGRLAAKQGWRFDSTYD  145 (175)
Q Consensus       117 ~p~~GD~V~VhYtG~L~~~dG~vFDSS~d  145 (175)
                      ++++||.|.+||++++.  ||++||+|.+
T Consensus         2 ~i~k~~~V~i~Y~~~~~--dg~v~Dtt~e   28 (174)
T COG1047           2 KIEKGDVVSLHYTLKVE--DGEVVDTTDE   28 (174)
T ss_pred             cccCCCEEEEEEEEEec--CCcEEEcccc
Confidence            47899999999999999  6999999965

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	175
1kt0_A	457	Structure Of The Large Fkbp-like Protein, Fkbp51, I		4e-05
1kt1_A	457	Structure Of The Large Fkbp-Like Protein, Fkbp51, I		5e-05
3o5e_A	144	Fk1 Domain Of Fkbp51, Crystal Form Vi Length = 144		5e-05
4drh_A	144	Co-crystal Structure Of The Ppiase Domain Of Fkbp51		6e-05
3o5d_A	264	Crystal Structure Of A Fragment Of Fkbp51 Comprisin		9e-05
3o5l_A	128	Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I Le		1e-04
3o5g_A	128	Fk1 Domain Of Fkbp51, Crystal Form I Length = 128		1e-04
2ki3_A	126	Structural And Biochemical Characterization Of Fk50		4e-04
3uf8_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		8e-04
4dz2_A	113	Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Is		8e-04
3vaw_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		8e-04
4ggq_C	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		8e-04

>pdb|1KT0|A Chain A, Structure Of The Large Fkbp-like Protein, Fkbp51, Involved In Steroid Receptor Complexes Length = 457

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGS 162
           GV  +  R+G G   P+ GD+V +HY G+L+   G +FDS++D  +      PF+F LG 
Sbjct: 32  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSSHDRNE------PFVFSLGK 83
Query: 163 GKV 165
           G+V
Sbjct: 84  GQV 86

>pdb|1KT1|A Chain A, Structure Of The Large Fkbp-Like Protein, Fkbp51, Involved In Steroid Receptor Complexes Length = 457

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGS 162
           GV  +  R+G G   P+ GD+V +HY G+LA   G +FDS++D  +      PF+F +G 
Sbjct: 32  GVLKIVKRVGHGEETPMIGDRVYVHYNGKLA--NGKKFDSSHDRNE------PFVFSIGK 83
Query: 163 GKV 165
           G+V
Sbjct: 84  GQV 86

>pdb|3O5E|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vi Length = 144

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGS 162
           GV  +  R+G G   P+ GD+V +HY G+L+   G +FDS++D  +      PF+F LG 
Sbjct: 36  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSSHDRNE------PFVFSLGK 87
Query: 163 GKV 165
           G+V
Sbjct: 88  GQV 90

>pdb|4DRH|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51, Rapamycin And The Frb Fragment Of Mtor At Low Ph Length = 144

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGS 162
           GV  +  R+G G   P+ GD+V +HY G+L+   G +FDS++D  +      PF+F LG 
Sbjct: 36  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSSHDRNE------PFVFSLGK 87
Query: 163 GKV 165
           G+V
Sbjct: 88  GQV 90

>pdb|3O5D|A Chain A, Crystal Structure Of A Fragment Of Fkbp51 Comprising The Fk1 And Fk2 Domains Length = 264

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGS 162
           GV  +  R+G G   P+ GD+V +HY G+L+   G +FDS++D  +      PF+F LG 
Sbjct: 36  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSSHDRNE------PFVFSLGK 87
Query: 163 GKV 165
           G+V
Sbjct: 88  GQV 90

>pdb|3O5L|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I Length = 128

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGS 162
           GV  +  R+G G   P+ GD+V +HY G+L+   G +FDS++D  +      PF+F LG 
Sbjct: 20  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSSHDRNE------PFVFSLGK 71
Query: 163 GKV 165
           G+V
Sbjct: 72  GQV 74

>pdb|3O5G|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form I Length = 128

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGS 162
           GV  +  R+G G   P+ GD+V +HY G+L+   G +FDS++D  +      PF+F LG 
Sbjct: 20  GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSSHDRNE------PFVFSLGK 71
Query: 163 GKV 165
           G+V
Sbjct: 72  GQV 74

>pdb|2KI3|A Chain A, Structural And Biochemical Characterization Of Fk506 Binding Domain From Plasmodium Vivax Length = 126

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 95  ELLELPNSGGVKALDLRLGRG---PVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSG 151
           E + L   GGV    LR G G     P  G++V +HY G+L +  G  FDS+ +      
Sbjct: 7   EQVHLTEDGGVVKTILRKGEGGEENAPKKGNEVTVHYVGKLES-SGKVFDSSRERN---- 61
Query: 152 EPIPFLFILGSGKV 165
             +PF F LG G+V
Sbjct: 62  --VPFKFHLGQGEV 73

>pdb|3UF8|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With A G95a Surface Mutation From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSG 163
           G+K  DL  G G     G  V++HY G L    G +FDS+ D  D      PF F+LG G
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLT--DGQKFDSSKDRND------PFAFVLGGG 156
Query: 164 KV 165
            V
Sbjct: 157 MV 158

>pdb|4DZ2|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation R92g From Burkholderia Pseudomallei Complexed With Fk506 Length = 113

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSG 163
           G+K  DL  G G     G  V++HY G L   Q  +FDS+ D  D      PF F+LG G
Sbjct: 9   GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQ--KFDSSKDRND------PFAFVLGGG 60
Query: 164 KV 165
            V
Sbjct: 61  MV 62

>pdb|3VAW|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation V3i From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSG 163
           G+K  DL  G G     G  V++HY G L    G +FDS+ D  D      PF F+LG G
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLT--DGQKFDSSKDRND------PFAFVLGGG 156
Query: 164 KV 165
            V
Sbjct: 157 MV 158

>pdb|4GGQ|C Chain C, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase From Burkholderia Pseudomallei Complexed With Cj40 Length = 209

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSG 163
           G+K  DL  G G     G  V++HY G L    G +FDS+ D  D      PF F+LG G
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLT--DGQKFDSSKDRND------PFAFVLGGG 156
Query: 164 KV 165
            V
Sbjct: 157 MV 158

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	175
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	8e-13
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	1e-11
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	4e-11
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	8e-11
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	9e-11
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	1e-10
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	1e-10
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	2e-10
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	3e-10
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	3e-10
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	8e-10
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	9e-10
2ppn_A	107	FK506-binding protein 1A; high resolution protein	1e-09
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	2e-09
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	2e-09
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	9e-04
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	3e-09
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	3e-09
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	3e-09
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	7e-09
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	1e-08
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	2e-08
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	2e-08
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	3e-08
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	3e-07
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	7e-07
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	2e-06
1ix5_A	151	FKBP; ppiase, isomerase; NMR {Methanothermococcust	1e-04
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	2e-04
3prb_A	231	FKBP-type peptidyl-prolyl CIS-trans isomerase; cha	4e-04
3pr9_A	157	FKBP-type peptidyl-prolyl CIS-trans isomerase; FKB	8e-04

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens} Length = 134

 Score = 61.1 bits (149), Expect = 8e-13
 Identities = 20/83 (24%), Positives = 28/83 (33%), Gaps = 7/83 (8%)

Query: 83  SASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDS 142
           +   S     +  +L++    GV    +R G G +      V + Y G L       FDS
Sbjct: 6   APGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYL-EHMDRPFDS 64

Query: 143 TYDHKDQSGEPIPFLFILGSGKV 165
            Y  K       P L  LG    
Sbjct: 65  NYFRKT------PRLMKLGEDIT 81

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A Length = 129

 Score = 57.7 bits (140), Expect = 1e-11
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 10/80 (12%)

Query: 89  AAAAAAELLELPNSGGVKALDLRLG---RGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYD 145
                 E +EL   GGV    L+ G      +P  G++V +HY G+L    G  FDS++D
Sbjct: 2   TTEQEFEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKL-ESTGKVFDSSFD 60

Query: 146 HKDQSGEPIPFLFILGSGKV 165
                    PF F L  G+V
Sbjct: 61  RNV------PFKFHLEQGEV 74

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A Length = 128

 Score = 56.5 bits (137), Expect = 4e-11
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)

Query: 86  SSAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTY 144
           + A      E +      GV  +  R+G G   P+ GD+V +HY G+L    G +FDS++
Sbjct: 2   APATVTEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKL--SNGKKFDSSH 59

Query: 145 DHKDQSGEPIPFLFILGSGKV 165
           D  +      PF+F LG G+V
Sbjct: 60  DRNE------PFVFSLGKGQV 74

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A Length = 144

 Score = 56.2 bits (136), Expect = 8e-11
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%)

Query: 84  ASSSAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDS 142
            S +A  A   E +      GV  +  R+G G   P+ GD+V +HY G+L    G +FDS
Sbjct: 16  ESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKL--SNGKKFDS 73

Query: 143 TYDHKDQSGEPIPFLFILGSGKV 165
           ++D  +      PF+F LG G+V
Sbjct: 74  SHDRNE------PFVFSLGKGQV 90

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A* Length = 133

 Score = 55.7 bits (135), Expect = 9e-11
 Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 15/89 (16%)

Query: 84  ASSSAAAAAAAELLELPNSGGVKAL-------DLRLGRGPVPVDGDQVAIHYYGRLAAKQ 136
            SS      ++ L+   +   V          DL  G G     G  V++HY G L    
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLT--D 59

Query: 137 GWRFDSTYDHKDQSGEPIPFLFILGSGKV 165
           G +FDS+ D  D      PF F+LG G V
Sbjct: 60  GQKFDSSKDRND------PFAFVLGGGMV 82

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A Length = 129

 Score = 55.5 bits (134), Expect = 1e-10
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 102 SGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILG 161
             G+   D  +G GP  V G  +  HY G+L  + G  FDS+Y+         P  F +G
Sbjct: 11  PSGLAFCDKVVGYGPEAVKGQLIKAHYVGKL--ENGKVFDSSYNRGK------PLTFRIG 62

Query: 162 SGKV 165
            G+V
Sbjct: 63  VGEV 66

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Length = 280

 Score = 57.2 bits (138), Expect = 1e-10
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 9/84 (10%)

Query: 83  SASSSAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFD 141
           S + SA        +      GV  +  R G G  +P+ GD+V +HY G L    G +FD
Sbjct: 31  SGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWL--LDGTKFD 88

Query: 142 STYDHKDQSGEPIPFLFILGSGKV 165
           S+ D KD       F F LG G+V
Sbjct: 89  SSLDRKD------KFSFDLGKGEV 106

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 1euv_B 3v60_A 3v61_A 3v62_A* Length = 209

 Score = 56.0 bits (135), Expect = 2e-10
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 12/88 (13%)

Query: 82  FSASSSAAAAAAAELLELPN----SGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQG 137
                +    A  E +          G+K  DL  G G     G  V++HY G L    G
Sbjct: 79  LDMEDNDIIEAHREQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWL--TDG 136

Query: 138 WRFDSTYDHKDQSGEPIPFLFILGSGKV 165
            +FDS+ D  D      PF F+LG G V
Sbjct: 137 QKFDSSKDRND------PFAFVLGGGMV 158

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457

 Score = 57.0 bits (137), Expect = 3e-10
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 9/82 (10%)

Query: 85  SSSAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST 143
           S +A  A   E +      GV  +  R+G G   P+ GD+V +HY G+L+   G +FDS+
Sbjct: 13  SPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSS 70

Query: 144 YDHKDQSGEPIPFLFILGSGKV 165
           +D  +      PF+F LG G+V
Sbjct: 71  HDRNE------PFVFSLGKGQV 86

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1 Length = 113

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 9/65 (13%)

Query: 102 SGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFIL 160
            G VK   +  G G   P  GD V IHY G L  + G +FDS+ D         PF   +
Sbjct: 5   EGNVKIDRISPGDGATFPKTGDLVTIHYTGTL--ENGQKFDSSVDRGS------PFQCNI 56

Query: 161 GSGKV 165
           G G+V
Sbjct: 57  GVGQV 61

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana} Length = 180

 Score = 54.1 bits (130), Expect = 8e-10
 Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 8/64 (12%)

Query: 103 GGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILG- 161
             V    ++ G G  P       +HY          +F+ T+  +       P   +LG 
Sbjct: 49  EKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNS-QHKFEDTWHEQQ------PIELVLGK 101

Query: 162 SGKV 165
             K 
Sbjct: 102 EKKE 105

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1 Length = 135

 Score = 53.1 bits (128), Expect = 9e-10
 Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 9/64 (14%)

Query: 103 GGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILG 161
           GGV  L  + G+G V P  G  V +HY G L  + G +FDS+ D  D       F F LG
Sbjct: 14  GGVLKLIKKEGQGVVKPTTGTTVKVHYVGTL--ENGTKFDSSRDRGD------QFSFNLG 65

Query: 162 SGKV 165
            G V
Sbjct: 66  RGNV 69

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ... Length = 107

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 9/63 (14%)

Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGS 162
           GV+   +  G G   P  G    +HY G L  + G +FDS+ D         PF F+LG 
Sbjct: 1   GVQVETISPGDGRTFPKRGQTCVVHYTGML--EDGKKFDSSRDRNK------PFKFMLGK 52

Query: 163 GKV 165
            +V
Sbjct: 53  QEV 55

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens} Length = 102

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)

Query: 113 GRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV 165
           G       GD + +HY G+L  + G  FDS+           PF+F LG+G+V
Sbjct: 1   GSPIKSRKGDVLHMHYTGKL--EDGTEFDSSLPQNQ------PFVFSLGTGQV 45

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 54.4 bits (131), Expect = 2e-09
 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 9/64 (14%)

Query: 103 GGVKALDLRLGRG-PVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILG 161
            G+K   L+ G G   P  GD+V +HY G L    G +FDS+ D  D       F F LG
Sbjct: 11  QGLKKKLLKEGEGWDTPEVGDEVEVHYTGTL--LDGKKFDSSRDRDD------TFKFKLG 62

Query: 162 SGKV 165
            G+V
Sbjct: 63  QGQV 66

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 37.9 bits (88), Expect = 9e-04
 Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 9/56 (16%)

Query: 113 GRGPVPVDGDQVAIHYYGRLAAKQGWRF-DSTYDHKDQSGEPIPFLFILGSGKVSP 167
                P +G  V +   G+L    G  F    +D ++      PF F      V  
Sbjct: 255 EGYERPNEGAVVTVKITGKLQ--DGTVFLKKGHDEQE------PFEFKTDEEAVIE 302

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 135

 Score = 51.9 bits (125), Expect = 3e-09
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 14/80 (17%)

Query: 88  AAAAAAAELLELPNSGGVKALDLRLGRGPV--PVDGDQVAIHYYGRLAAKQGWRFDSTYD 145
           ++ ++  E L++  +G ++   L  G      PV G  V +H    L  + G R      
Sbjct: 2   SSGSSGEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSL--ENGTRVQEEP- 58

Query: 146 HKDQSGEPIPFLFILGSGKV 165
                      +F LG   V
Sbjct: 59  ---------ELVFTLGDCDV 69

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A Length = 118

 Score = 51.5 bits (124), Expect = 3e-09
 Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 14/77 (18%)

Query: 91  AAAAELLELPNSGGVKALDLRLGRGPV--PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKD 148
            +  E L++  +G ++   L  G      PV G  V +H    L  + G R         
Sbjct: 1   GSPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSL--ENGTRVQEEP---- 54

Query: 149 QSGEPIPFLFILGSGKV 165
                   +F LG   V
Sbjct: 55  ------ELVFTLGDCDV 65

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens} Length = 157

 Score = 52.1 bits (125), Expect = 3e-09
 Identities = 20/83 (24%), Positives = 28/83 (33%), Gaps = 14/83 (16%)

Query: 85  SSSAAAAAAAELLELPNSGGVKALDLRLGRGPV--PVDGDQVAIHYYGRLAAKQGWRFDS 142
              A A A  E L++  +G ++   L  G      PV G  V +H    L  + G R   
Sbjct: 25  PEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSL--ENGTRVQE 82

Query: 143 TYDHKDQSGEPIPFLFILGSGKV 165
                         +F LG   V
Sbjct: 83  EP----------ELVFTLGDCDV 95

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia} Length = 130

 Score = 50.7 bits (122), Expect = 7e-09
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 9/65 (13%)

Query: 102 SGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFIL 160
           S  ++   L  G G   P  G +V +HY GR     G +FDS+           PF F L
Sbjct: 23  SAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRF--PDGKQFDSSRSRGK------PFQFTL 74

Query: 161 GSGKV 165
           G+G+V
Sbjct: 75  GAGEV 79

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens} Length = 125

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 7/66 (10%)

Query: 102 SGGVKALDLRLGR--GPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFI 159
              VK   L+           GD + +HY G L  K G  F ST+ H +  G+  P  F 
Sbjct: 11  EPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYL-EKDGSLFHSTHKHNN--GQ--PIWFT 65

Query: 160 LGSGKV 165
           LG  + 
Sbjct: 66  LGILEA 71

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} PDB: 1pbk_A* Length = 119

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 18/64 (28%), Positives = 23/64 (35%), Gaps = 4/64 (6%)

Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGE-PIPFLFILG 161
                 L+ G     P  GD V   Y G L    G  FD+      +  +   P  F +G
Sbjct: 5   KYTKSILKKGDKTNFPKKGDVVHCWYTGTL--PDGTVFDTNIQTSSKKKKNAKPLSFKVG 62

Query: 162 SGKV 165
            GKV
Sbjct: 63  VGKV 66

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A* Length = 213

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 24/80 (30%), Positives = 28/80 (35%), Gaps = 13/80 (16%)

Query: 84  ASSSAAAAAAAELLELPNSGGVKALD-------LRLGRGPVPVDGDQVAIHYYGRLAAKQ 136
            +        A L E  N  GV  L        +  G G  P   D V + Y GRL    
Sbjct: 80  KADENKVKGEAFLTENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLI--D 137

Query: 137 GWRFDSTYDHKDQSGEPIPF 156
           G  FDST       G+P  F
Sbjct: 138 GTVFDSTEKT----GKPATF 153

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A Length = 224

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 84  ASSSAAAAAAAELLELPNSGGVKALD-------LRLGRGPVPVDGDQVAIHYYGRLAAKQ 136
            ++   A       +     GVK          +  G+G  P D D V ++Y G L    
Sbjct: 95  DAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLI--D 152

Query: 137 GWRFDSTYDHKDQSGEPIPF 156
           G  FD++Y      GEP+ F
Sbjct: 153 GKEFDNSYTR----GEPLSF 168

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} Length = 338

 Score = 48.1 bits (114), Expect = 3e-07
 Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 9/96 (9%)

Query: 71  VTTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYG 130
           + T    ++ S  +             E+ +   V    ++ G G  P       +HY  
Sbjct: 18  IVTEGSAVVHSEPSQEGNVPPKVDSEAEVLD-EKVSKQIIKEGHGSKPSKYSTCFLHYRA 76

Query: 131 RLAAKQGWRFDSTYDHKDQSGEPIPFLFILG-SGKV 165
                   +F+ T+  +       P   +LG   K 
Sbjct: 77  WTKN-SQHKFEDTWHEQQ------PIELVLGKEKKE 105

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1 Length = 167

 Score = 45.8 bits (109), Expect = 7e-07
 Identities = 17/76 (22%), Positives = 25/76 (32%), Gaps = 14/76 (18%)

Query: 89  AAAAAAELLELPNSGGVKALD-------LRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRF 140
                  + +         L        +  G G   P   D+  +HY GRL    G  F
Sbjct: 16  KRVGRLFMEQKAAQPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLR--DGTVF 73

Query: 141 DSTYDHKDQSGEPIPF 156
           DS+ +     G+P  F
Sbjct: 74  DSSRER----GKPTTF 85

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} Length = 219

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 26/108 (24%), Positives = 36/108 (33%), Gaps = 25/108 (23%)

Query: 65  ALTVSIVTTTLEILISSFSASSSAAAAAAAE---------LLELPNSGGVKALD------ 109
           AL    +   L    ++ + + +A   A  E         +       GVK L       
Sbjct: 63  ALKQERIDQILREHDAAIAQAETAGTDAPTEAALKAERTFMAGEKAKPGVKELADGILMT 122

Query: 110 -LRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPF 156
            L  G GP P    +V + Y GRL    G  FD        S +P  F
Sbjct: 123 ELTPGTGPKPDANGRVEVRYVGRLP--DGKIFDQ-------STQPQWF 161

>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1 Length = 151

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 9/57 (15%)

Query: 120 DGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPI-------PFLFILGSGKVSPNF 169
            G ++ + Y G+L    G  FD++ +   +            P  F++G G++   F
Sbjct: 4   KGVKIKVDYIGKLE--SGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGF 58

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli} Length = 169

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 8/50 (16%)

Query: 120 DGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNF 169
               V +H+  +L    G   +ST ++        P LF LG   +S   
Sbjct: 27  SNSAVLVHFTLKLD--DGTTAESTRNNGK------PALFRLGDASLSEGL 68

>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A Length = 231

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 10/57 (17%)

Query: 120 DGDQVAIHYYGRLAAKQGWRFDSTYDHK-------DQSGEPIPFLFILGSGKVSPNF 169
            G  V I Y G +    G  FD+T +         + +    P     G G+V P  
Sbjct: 4   KGKMVKISYDGYV---DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGL 57

>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} PDB: 3pra_A Length = 157

 Score = 37.0 bits (86), Expect = 8e-04
 Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 10/57 (17%)

Query: 120 DGDQVAIHYYGRLAAKQGWRFDSTYD-------HKDQSGEPIPFLFILGSGKVSPNF 169
            G  V I Y G +    G  FD+T +         + +    P     G G+V P  
Sbjct: 4   KGKMVKISYDGYV---DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGL 57

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	175
2lkn_A	165	AH receptor-interacting protein; FKBP-type domain,	99.69
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	99.58
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	99.55
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	99.55
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	99.54
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.54
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	99.54
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.54
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	99.54
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	99.53
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	99.52
2ppn_A	107	FK506-binding protein 1A; high resolution protein	99.52
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	99.5
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	99.48
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	99.47
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	99.47
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	99.45
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	99.45
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	99.44
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	99.42
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	99.39
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	99.39
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	99.38
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	99.37
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	99.35
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	99.26
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	99.22
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	99.17
1p5q_A	336	FKBP52, FK506-binding protein 4; isomerase; 2.80A	98.96
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	98.96
1hxv_A	113	Trigger factor; FKBP fold, ppiase, chaperone; NMR	98.96
2kr7_A	151	FKBP-type peptidyl-prolyl CIS-trans isomerase SLY;	98.93
3pr9_A	157	FKBP-type peptidyl-prolyl CIS-trans isomerase; FKB	98.92
1ix5_A	151	FKBP; ppiase, isomerase; NMR {Methanothermococcust	98.84
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	98.8
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	98.27
1w26_A	432	Trigger factor, TF; chaperone, protein folding, ri	98.14
1t11_A	392	Trigger factor, TF; helix-turn-helix, four-helix-b	98.07
3prb_A	231	FKBP-type peptidyl-prolyl CIS-trans isomerase; cha	97.6
2k8i_A	171	SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase,	95.05
3cgm_A	158	SLYD, peptidyl-prolyl CIS-trans isomerase; chapero	93.72
3gty_X	433	Trigger factor, TF; chaperone-client complex, cell	93.02

>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}

Probab=99.69  E-value=1.1e-17  Score=133.97  Aligned_cols=69  Identities=20%  Similarity=0.328  Sum_probs=61.7

Q ss_pred             CCCCCeEEEEeEcCCCCC--CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          100 PNSGGVKALDLRLGRGPV--PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       100 ~~~sGv~~~iLk~G~G~~--p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      ..++||+|+++++|+|..  +.+||+|.|||+|++.|.||++||||++++.      |+.|.+|.++||+|||+||.
T Consensus         7 ~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~------P~~f~lG~g~vI~Gwd~gl~   77 (165)
T 2lkn_A            7 LREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGK------PMELIIGKKFKLPVWETIVC   77 (165)
T ss_dssp             HHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTC------CEEEESSSSCSCSHHHHHHT
T ss_pred             ccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCC------CEEEEecCCCccHHHHHHHh
Confidence            357999999999999975  4689999999999997446999999999853      99999999999999999985

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}

Probab=99.58  E-value=1.4e-15  Score=116.26  Aligned_cols=77  Identities=25%  Similarity=0.344  Sum_probs=63.9

Q ss_pred             HhcccceecCCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHH
Q 030561           91 AAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFL  170 (175)
Q Consensus        91 ~~~~~~~~l~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~e  170 (175)
                      ..+++..+++.++|++|+++++|+|..+..||.|.+||++++.+ +|++||++++++    +  |+.|.+|.+++|+||+
T Consensus        14 ~~~~~~~~v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~-~G~~fdss~~~~----~--p~~f~lG~g~~i~G~e   86 (134)
T 3b7x_A           14 RLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEH-MDRPFDSNYFRK----T--PRLMKLGEDITLWGME   86 (134)
T ss_dssp             HHTTTCEESSSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTT-CSSCSEEC-------------CEEC-CCCCCHHHH
T ss_pred             HhccccceeeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECC-CCeEEEecCCCC----C--CEEEEcCCcchhHHHH
Confidence            34678889999999999999999999999999999999999985 699999998764    2  9999999999999999


Q ss_pred             hhhc
Q 030561          171 VNAI  174 (175)
Q Consensus       171 eALi  174 (175)
                      ++|.
T Consensus        87 ~aL~   90 (134)
T 3b7x_A           87 LGLL   90 (134)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9985

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}

Probab=99.55  E-value=1.4e-14  Score=108.71  Aligned_cols=74  Identities=27%  Similarity=0.295  Sum_probs=64.2

Q ss_pred             ceecCCCCCeEEEEeEcCC--CCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhh
Q 030561           96 LLELPNSGGVKALDLRLGR--GPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNA  173 (175)
Q Consensus        96 ~~~l~~~sGv~~~iLk~G~--G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeAL  173 (175)
                      +..+.+++|++|+++++|+  |.+++.||.|.+||++++.+ ||++||++++.+.  +.  |+.|.+|.+++|+||+++|
T Consensus         5 ~~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~-dG~~fdss~~~~~--~~--p~~f~lG~~~~i~G~e~~l   79 (125)
T 4dip_A            5 MGALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEK-DGSLFHSTHKHNN--GQ--PIWFTLGILEALKGWDQGL   79 (125)
T ss_dssp             CGGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETT-TCCEEEEHHHHTT--TC--CEEEETTSCSSCHHHHHHS
T ss_pred             CceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECC-CCcEEEEcccCCC--Cc--CEEEEeCCCChhHHHHHHH
Confidence            4455688999999999998  78899999999999999984 6999999986321  13  9999999999999999998


Q ss_pred             c
Q 030561          174 I  174 (175)
Q Consensus       174 i  174 (175)
                      .
T Consensus        80 ~   80 (125)
T 4dip_A           80 K   80 (125)
T ss_dssp             T
T ss_pred             h
Confidence            5

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1

Probab=99.55  E-value=1.4e-14  Score=106.75  Aligned_cols=66  Identities=38%  Similarity=0.600  Sum_probs=60.7

Q ss_pred             CCCCeEEEEeEcCCCCC-CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          101 NSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~~-p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .++|++|+++++|+|.. ++.||.|.+||++++.  ||++||++++++    .  |+.|.+|.+++|+||+++|.
T Consensus         4 ~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~--dG~~~d~s~~~~----~--p~~f~lG~~~~i~g~e~~l~   70 (113)
T 1yat_A            4 IEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLE--NGQKFDSSVDRG----S--PFQCNIGVGQVIKGWDVGIP   70 (113)
T ss_dssp             CGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEET--TSCEEEESTTTT----C--CEEEETTSSSSCHHHHHHGG
T ss_pred             CCCCeEEEEEECCCCcccCCCCCEEEEEEEEEEC--CCCEEEecCCCC----C--cEEEEeCCCCccHHHHHHHh
Confidence            45899999999999998 9999999999999997  799999998753    2  99999999999999999985

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1

Probab=99.54  E-value=1.5e-14  Score=110.71  Aligned_cols=72  Identities=36%  Similarity=0.631  Sum_probs=64.1

Q ss_pred             cceecC--CCCCeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHh
Q 030561           95 ELLELP--NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLV  171 (175)
Q Consensus        95 ~~~~l~--~~sGv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~ee  171 (175)
                      +..+++  .++|++|+++++|+|. .|+.||.|.+||++++.  ||++||++++++.      |+.|.+|.+++|+||++
T Consensus         4 ~~~dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~--dG~~fdss~~~~~------p~~f~lG~~~vi~G~e~   75 (135)
T 1r9h_A            4 EKIDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLE--NGTKFDSSRDRGD------QFSFNLGRGNVIKGWDL   75 (135)
T ss_dssp             -CEECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEET--TSCEEEEHHHHTS------CEEEETTTTSSCHHHHH
T ss_pred             cceecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEEC--CCCEEEecCcCCC------CEEEEeCCCCccHHHHH
Confidence            345677  8999999999999997 69999999999999997  6999999987642      99999999999999999


Q ss_pred             hhc
Q 030561          172 NAI  174 (175)
Q Consensus       172 ALi  174 (175)
                      +|.
T Consensus        76 ~l~   78 (135)
T 1r9h_A           76 GVA   78 (135)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            985

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A

Probab=99.54  E-value=1.9e-14  Score=108.87  Aligned_cols=71  Identities=35%  Similarity=0.677  Sum_probs=63.6

Q ss_pred             ceecC--CCCCeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhh
Q 030561           96 LLELP--NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVN  172 (175)
Q Consensus        96 ~~~l~--~~sGv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeA  172 (175)
                      ..++.  .++|+.++++++|+|. .|+.||.|.+||++++.  ||++||++++++.      |+.|.+|.+++|+||+++
T Consensus        10 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~--dG~~fdss~~~~~------p~~f~lG~g~~i~G~e~~   81 (128)
T 3o5q_A           10 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSSHDRNE------PFVFSLGKGQVIKAWDIG   81 (128)
T ss_dssp             CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEET--TSCEEEEHHHHTS------CEEEETTSSSSCHHHHHH
T ss_pred             cceecccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEEC--CCCEEEecCCCCC------CEEEEECCCCccHHHHHH
Confidence            34454  7899999999999997 69999999999999998  6999999987643      999999999999999999


Q ss_pred             hc
Q 030561          173 AI  174 (175)
Q Consensus       173 Li  174 (175)
                      |.
T Consensus        82 l~   83 (128)
T 3o5q_A           82 VA   83 (128)
T ss_dssp             HT
T ss_pred             Hh
Confidence            85

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*

Probab=99.54  E-value=2e-14  Score=110.12  Aligned_cols=67  Identities=36%  Similarity=0.630  Sum_probs=61.8

Q ss_pred             CCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          100 PNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       100 ~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      +.++|++|+++++|+|..++.||.|.+||++++.  ||++||++++++    +  |+.|.+|.+++|+||+++|+
T Consensus        25 ~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~--dG~~fdss~~~~----~--p~~f~lG~g~vi~G~eeaL~   91 (133)
T 2y78_A           25 TTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLT--DGQKFDSSKDRN----D--PFAFVLGGGMVIKGWDEGVQ   91 (133)
T ss_dssp             ECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEET--TSCEEEETTTTT----C--CEEEETTSSSSCHHHHHHST
T ss_pred             ECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEEC--CCCEEeccCcCC----C--CEEEEeCCCChhHHHHHHHc
Confidence            3669999999999999999999999999999996  799999999764    2  99999999999999999986

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A

Probab=99.54  E-value=2e-14  Score=111.16  Aligned_cols=72  Identities=35%  Similarity=0.675  Sum_probs=64.8

Q ss_pred             cceecC--CCCCeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHh
Q 030561           95 ELLELP--NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLV  171 (175)
Q Consensus        95 ~~~~l~--~~sGv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~ee  171 (175)
                      +..|++  .++|+.++++++|+|. .|+.||.|.|||+|++.  ||++||++++++.      |+.|.+|.+++|+||++
T Consensus        25 ~~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~--dG~~fdss~~~~~------p~~f~lG~g~~i~G~e~   96 (144)
T 3o5e_A           25 QGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSSHDRNE------PFVFSLGKGQVIKAWDI   96 (144)
T ss_dssp             HCEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECT--TSCEEEESGGGTS------CEEEETTSSSSCHHHHH
T ss_pred             ccccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEEC--CCCEEEeecccCC------CeEEEeCCCcccHHHHH
Confidence            345565  7999999999999997 69999999999999998  6999999998753      99999999999999999


Q ss_pred             hhc
Q 030561          172 NAI  174 (175)
Q Consensus       172 ALi  174 (175)
                      +|.
T Consensus        97 ~l~   99 (144)
T 3o5e_A           97 GVA   99 (144)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            986

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A

Probab=99.54  E-value=1.1e-14  Score=110.27  Aligned_cols=66  Identities=32%  Similarity=0.618  Sum_probs=60.8

Q ss_pred             CCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          101 NSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .++|++|+++++|+|..++.||.|.+||++++.  ||++||++++++    +  |+.|.+|.+++|+||+++|+
T Consensus        10 ~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~--dG~~fdss~~~~----~--p~~f~lG~~~~i~G~~~~L~   75 (129)
T 1u79_A           10 SPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLE--NGKVFDSSYNRG----K--PLTFRIGVGEVIKGWDQGIL   75 (129)
T ss_dssp             CTTSCEEEEEECCSSCBCCTTCEEEEEEEEECT--TSCEEEEHHHHT----S--CEEEETTSSSSCHHHHHHHH
T ss_pred             CCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEEC--CCCEEEecCCCC----C--CEEEEeCCCCccHHHHHHhc
Confidence            559999999999999999999999999999997  699999999754    2  99999999999999999984

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*

Probab=99.53  E-value=2.4e-14  Score=106.22  Aligned_cols=72  Identities=25%  Similarity=0.371  Sum_probs=60.6

Q ss_pred             CCCCeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCC-CCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          101 NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKD-QSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~-~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .|+|+.++++++|+|. .|+.||.|.+||++++.  ||++||+|++... ..+...|+.|.+|.+++|+||+++|.
T Consensus         2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~--dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~   75 (119)
T 3kz7_A            2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLP--DGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALL   75 (119)
T ss_dssp             CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECT--TSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHT
T ss_pred             CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEEC--CCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHh
Confidence            4699999999999996 59999999999999997  6999999986410 00112399999999999999999985

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}

Probab=99.52  E-value=1.6e-14  Score=110.15  Aligned_cols=71  Identities=32%  Similarity=0.533  Sum_probs=63.5

Q ss_pred             ceecCCCCCeEEE--EeEcCCCCC-CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhh
Q 030561           96 LLELPNSGGVKAL--DLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVN  172 (175)
Q Consensus        96 ~~~l~~~sGv~~~--iLk~G~G~~-p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeA  172 (175)
                      +...+.++|++|+  ++++|+|.. ++.||.|.+||++++.  ||++||++++++    .  |+.|.+|.+++|+||+++
T Consensus        15 ~~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~--dG~~fdss~~~~----~--p~~f~lG~g~vi~G~e~a   86 (130)
T 2lgo_A           15 QTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFP--DGKQFDSSRSRG----K--PFQFTLGAGEVIKGWDQG   86 (130)
T ss_dssp             SSCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECT--TSCEEECTTTTT----C--CEEEETTSTTSCHHHHHH
T ss_pred             ccceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEEC--CCCEEEccCcCC----C--CEEEEeCCCCccHHHHHH
Confidence            3445578999999  999999998 9999999999999986  699999999764    3  999999999999999999


Q ss_pred             hc
Q 030561          173 AI  174 (175)
Q Consensus       173 Li  174 (175)
                      |.
T Consensus        87 L~   88 (130)
T 2lgo_A           87 VA   88 (130)
T ss_dssp             HH
T ss_pred             Hh
Confidence            85

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...

Probab=99.52  E-value=2.8e-14  Score=103.93  Aligned_cols=63  Identities=33%  Similarity=0.627  Sum_probs=58.4

Q ss_pred             CeEEEEeEcCCCCC-CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          104 GVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       104 Gv~~~iLk~G~G~~-p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      |++|+++++|+|.. ++.||.|.+||++++.  ||++||++++++    +  |+.|.+|.+++|+||+++|.
T Consensus         1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~--dG~~~d~s~~~~----~--p~~f~lG~~~~i~g~~~~l~   64 (107)
T 2ppn_A            1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLE--DGKKFDSSRDRN----K--PFKFMLGKQEVIRGWEEGVA   64 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEET--TSCEEEEHHHHT----S--CEEEETTSCCSCHHHHHHHT
T ss_pred             CcEEEEEECcCCCcCCCCCCEEEEEEEEEEC--CCCEEEecCCCC----C--CEEEEeCCCChHHHHHHHHh
Confidence            78999999999987 9999999999999998  699999998764    2  99999999999999999985

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}

Probab=99.50  E-value=6.6e-14  Score=112.37  Aligned_cols=67  Identities=18%  Similarity=0.338  Sum_probs=61.6

Q ss_pred             CCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCC-CccHhHHhhhc
Q 030561          101 NSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSG-KVSPNFLVNAI  174 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~G-qVIpG~eeALi  174 (175)
                      .++|+.|+++++|+|..|+.||.|.|||+|++.+ +|++||+||+++    .  |+.|.+|.+ ++|+||+++|.
T Consensus        47 ~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~-dG~~fdss~~~~----~--p~~f~lG~g~~vi~G~eeaL~  114 (180)
T 2f4e_A           47 LDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKN-SQHKFEDTWHEQ----Q--PIELVLGKEKKELAGLAIGVA  114 (180)
T ss_dssp             EETTEEEEEEECCBSCCBCTTCEEEEEEEEEETT-TCCEEEETTTTT----C--CEEEETTSCCGGGHHHHHHHT
T ss_pred             CCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECC-CCcEEeccCccC----C--CEEEEeCCCCchhHHHHHHHh
Confidence            4489999999999999999999999999999985 699999999764    3  999999999 99999999986

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1

Probab=99.48  E-value=4.8e-14  Score=112.43  Aligned_cols=77  Identities=25%  Similarity=0.350  Sum_probs=66.0

Q ss_pred             cHHHHHhcccceecCCCCCeEEEEeEcCCCCC-CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCC
Q 030561           86 SSAAAAAAAELLELPNSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGK  164 (175)
Q Consensus        86 ~~~~~~~~~~~~~l~~~sGv~~~iLk~G~G~~-p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~Gq  164 (175)
                      +.+.++...++..  .++|++|+++++|+|.. |..||.|.|||+|++.  ||++||++++++    .  |+.|.+  ++
T Consensus        22 ~l~~~~~~~~~~~--~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~--dG~~fdss~~~g----~--p~~f~l--g~   89 (167)
T 1jvw_A           22 FMEQKAAQPDAVK--LPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLR--DGTVFDSSRERG----K--PTTFRP--NE   89 (167)
T ss_dssp             HHHHHHHSTTEEE--CTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECT--TSCEEEEHHHHT----S--CEEECG--GG
T ss_pred             HHHhcccCCCcEE--CCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEEC--CCCEEeeccccC----C--CEEEEe--Cc
Confidence            4555565666665  45999999999999998 9999999999999998  699999999764    2  999999  48


Q ss_pred             ccHhHHhhhc
Q 030561          165 VSPNFLVNAI  174 (175)
Q Consensus       165 VIpG~eeALi  174 (175)
                      +|+||+++|.
T Consensus        90 vI~G~eeaL~   99 (167)
T 1jvw_A           90 VIKGWTEALQ   99 (167)
T ss_dssp             SCHHHHHHHT
T ss_pred             hhHHHHHHHc
Confidence            9999999985

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*

Probab=99.47  E-value=1.1e-13  Score=113.67  Aligned_cols=69  Identities=36%  Similarity=0.621  Sum_probs=63.5

Q ss_pred             ecCCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561           98 ELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus        98 ~l~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      ..+.++|++|+++++|+|..|+.||.|.+||+|++.  ||++||++++++.      |+.|.+|.+++|+||+++|.
T Consensus        99 ~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~--dG~~fdss~~~~~------P~~f~lG~g~vi~G~eeaL~  167 (209)
T 3uf8_A           99 VVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLT--DGQKFDSSKDRND------PFAFVLGGGMVIKGWDEGVQ  167 (209)
T ss_dssp             CEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEET--TSCEEEESGGGTC------CEEEETTSSSSCHHHHHHHT
T ss_pred             ccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEEC--CCCEEEEccccCC------CEEEEeCCCccchhHHHHHh
Confidence            455789999999999999999999999999999997  6999999998653      99999999999999999985

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*

Probab=99.47  E-value=9.4e-14  Score=114.73  Aligned_cols=77  Identities=25%  Similarity=0.349  Sum_probs=66.7

Q ss_pred             cHHHHHhcccceecCCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCc
Q 030561           86 SSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV  165 (175)
Q Consensus        86 ~~~~~~~~~~~~~l~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqV  165 (175)
                      +.+.++.+.++..  .++|++|+++++|+|..|+.||.|.|||+|++.  ||++||++++++    .  |+.|.+  +++
T Consensus        91 ~l~~~~~~~~v~~--~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~--dG~vfdss~~~g----~--p~~f~l--g~v  158 (213)
T 1fd9_A           91 FLTENKNKPGVVV--LPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLI--DGTVFDSTEKTG----K--PATFQV--SQV  158 (213)
T ss_dssp             HHHHHHHSTTEEE--CTTSCEEEEEECCCSCCCCTTCEEEEEEEEEET--TSCEEEEHHHHC----S--CEEEEG--GGS
T ss_pred             HHHHhcccCCcEE--CCCccEEEEEecCCCccCCCCCEEEEEEEEEEC--CCCEEeeccccC----C--CEEEEc--Cch
Confidence            4555666666655  569999999999999999999999999999998  699999999864    3  999999  489


Q ss_pred             cHhHHhhhc
Q 030561          166 SPNFLVNAI  174 (175)
Q Consensus       166 IpG~eeALi  174 (175)
                      |+||+++|.
T Consensus       159 I~G~eeaL~  167 (213)
T 1fd9_A          159 IPGWTEALQ  167 (213)
T ss_dssp             CHHHHHHHT
T ss_pred             hhHHHHHHc
Confidence            999999985

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A

Probab=99.45  E-value=2.5e-13  Score=113.00  Aligned_cols=77  Identities=29%  Similarity=0.453  Sum_probs=67.1

Q ss_pred             cHHHHHhcccceecCCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCc
Q 030561           86 SSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV  165 (175)
Q Consensus        86 ~~~~~~~~~~~~~l~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqV  165 (175)
                      +.+.+..++++..  .++|++|+++++|+|..|+.||.|.|||+|++.  ||++||++++++    .  |+.|.+  +++
T Consensus       106 fl~~~~~~~~v~~--~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~--dG~vfdss~~~g----~--p~~f~l--g~v  173 (224)
T 1q6h_A          106 YREKFAKEKGVKT--SSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLI--DGKEFDNSYTRG----E--PLSFRL--DGV  173 (224)
T ss_dssp             HHHHHHHSTTEEE--CTTSCEEEEEECCSSCCCCTTCEEEEEEEEEET--TSCEEEEGGGGT----S--CEEEEG--GGS
T ss_pred             HHHHhCcCCCeEE--CCCceEEEEEecccCccccCCCEEEEEEEEEeC--CCCEEeeccccC----C--CEEEEc--CCc
Confidence            5555666677765  469999999999999999999999999999998  699999999864    3  999999  489


Q ss_pred             cHhHHhhhc
Q 030561          166 SPNFLVNAI  174 (175)
Q Consensus       166 IpG~eeALi  174 (175)
                      |+||+++|.
T Consensus       174 I~G~eeaL~  182 (224)
T 1q6h_A          174 IPGWTEGLK  182 (224)
T ss_dssp             CHHHHHHGG
T ss_pred             chhHHHHHc
Confidence            999999985

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A

Probab=99.45  E-value=2.9e-13  Score=102.20  Aligned_cols=69  Identities=35%  Similarity=0.640  Sum_probs=56.9

Q ss_pred             cCCCCCeEEEEeEcC---CCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561           99 LPNSGGVKALDLRLG---RGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus        99 l~~~sGv~~~iLk~G---~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      ++.++.+.++++++|   +|..++.||.|.+||+++++. ||++||++++++    .  |+.|.+|.+++|+||+++|+
T Consensus        12 ~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~-dG~~fd~s~~~~----~--p~~f~lG~g~~i~g~e~~l~   83 (129)
T 2vn1_A           12 LTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLES-TGKVFDSSFDRN----V--PFKFHLEQGEVIKGWDICVS   83 (129)
T ss_dssp             CSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETT-TCCEEEEGGGTT----C--CEEEETTSSSSCHHHHHHHT
T ss_pred             ECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECC-CCeEEEecCCCC----c--cEEEEeCCCCcCHHHHHHHh
Confidence            334444555789966   467899999999999999932 799999999764    2  99999999999999999985

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0

Probab=99.44  E-value=2e-13  Score=113.57  Aligned_cols=75  Identities=29%  Similarity=0.462  Sum_probs=66.5

Q ss_pred             ccHHHHHhcccceecCCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCC
Q 030561           85 SSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGK  164 (175)
Q Consensus        85 ~~~~~~~~~~~~~~l~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~Gq  164 (175)
                      .+.+.++.+.++.+++  +|++|+++++|+|+.|..||.|.|||+|++.  ||++||+|   +    .  |+.|.+|  +
T Consensus       101 ~fl~~n~~~~gv~~~~--sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~--dG~vfDss---~----~--P~~f~lG--~  165 (219)
T 3oe2_A          101 TFMAGEKAKPGVKELA--DGILMTELTPGTGPKPDANGRVEVRYVGRLP--DGKIFDQS---T----Q--PQWFRLD--S  165 (219)
T ss_dssp             HHHHHHHTSTTCEECG--GGCEEEEEECCCSCCCCTTSEEEEEEEEECT--TSCEEEEC---S----S--CEEEEGG--G
T ss_pred             HHHHHhccCCCcEECC--CCeEEEEEecCCCccCCCCCEEEEEEEEEEC--CCCEeecc---C----C--cEEEEec--c
Confidence            3567777777777654  9999999999999999999999999999998  69999999   2    2  9999997  8


Q ss_pred             ccHhHHhhhc
Q 030561          165 VSPNFLVNAI  174 (175)
Q Consensus       165 VIpG~eeALi  174 (175)
                      +|+||+++|.
T Consensus       166 vI~G~eeaL~  175 (219)
T 3oe2_A          166 VISGWTSALQ  175 (219)
T ss_dssp             SCHHHHHHHT
T ss_pred             hhHHHHHHHh
Confidence            9999999985

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A

Probab=99.42  E-value=4.7e-13  Score=99.60  Aligned_cols=70  Identities=24%  Similarity=0.359  Sum_probs=61.6

Q ss_pred             cccceecCCCCCeEEEEeEcCCCC--CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHH
Q 030561           93 AAELLELPNSGGVKALDLRLGRGP--VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFL  170 (175)
Q Consensus        93 ~~~~~~l~~~sGv~~~iLk~G~G~--~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~e  170 (175)
                      +.+..+++.+++++|+++++|+|.  .|+.||.|.+||++++.  ||++|+++    .      |+.|.+|.+++|+||+
T Consensus         3 ~~~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~--dG~~~ds~----~------p~~f~lG~~~~i~g~e   70 (118)
T 2awg_A            3 PEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLE--NGTRVQEE----P------ELVFTLGDCDVIQALD   70 (118)
T ss_dssp             TTCEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECT--TSCEEEEE----E------EEEEETTSSCSCHHHH
T ss_pred             cccceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEEC--CCCEEECC----C------CEEEEECCCChhHHHH
Confidence            355677777666999999999997  79999999999999997  69999973    1      9999999999999999


Q ss_pred             hhhc
Q 030561          171 VNAI  174 (175)
Q Consensus       171 eALi  174 (175)
                      ++|.
T Consensus        71 ~~l~   74 (118)
T 2awg_A           71 LSVP   74 (118)
T ss_dssp             HHGG
T ss_pred             HHHh
Confidence            9985

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}

Probab=99.39  E-value=3.5e-13  Score=114.05  Aligned_cols=67  Identities=18%  Similarity=0.338  Sum_probs=61.5

Q ss_pred             CCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCC-CccHhHHhhhc
Q 030561          101 NSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSG-KVSPNFLVNAI  174 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~G-qVIpG~eeALi  174 (175)
                      .++|+.++++++|+|..|..||.|.|||+|++.+ +|++||++++++    .  |+.|.+|.| ++|+||+++|.
T Consensus        47 ~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~-~g~~fd~~~~~~----~--~~~~~lg~~~~~i~g~e~~l~  114 (338)
T 2if4_A           47 LDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKN-SQHKFEDTWHEQ----Q--PIELVLGKEKKELAGLAIGVA  114 (338)
T ss_dssp             EETTEEEEEEECCBSCCCCTTCEEEEEEEEEETT-TCCCCEEHHHHT----C--CEEEETTSCCGGGHHHHHHHH
T ss_pred             CCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcC-CCcEeecccCCC----C--CeEEEcCCCCcccHHHHHHHh
Confidence            4689999999999999999999999999999985 699999998764    3  999999999 99999999985

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=99.39  E-value=1.1e-12  Score=111.64  Aligned_cols=71  Identities=35%  Similarity=0.579  Sum_probs=64.4

Q ss_pred             ceecC--CCCCeEEEEeEcCCCCC-CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhh
Q 030561           96 LLELP--NSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVN  172 (175)
Q Consensus        96 ~~~l~--~~sGv~~~iLk~G~G~~-p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeA  172 (175)
                      -.+++  .++|++|+++++|+|.. |+.||.|.|||+|++.  ||++||++++++    .  |+.|.+|.+++|+||+++
T Consensus        42 ~~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~--dG~~fdss~~~~----~--p~~f~lG~g~vi~G~e~a  113 (280)
T 1q1c_A           42 GVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLL--DGTKFDSSLDRK----D--KFSFDLGKGEVIKAWDIA  113 (280)
T ss_dssp             CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEET--TSCEEEESTTSS----S--CEEEETTTTSSCHHHHHH
T ss_pred             ccccccCCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEEC--CCCEEEecccCC----C--CEEEEECCcChhHHHHHH
Confidence            34676  78999999999999987 9999999999999997  699999999764    2  999999999999999999


Q ss_pred             hc
Q 030561          173 AI  174 (175)
Q Consensus       173 Li  174 (175)
                      |.
T Consensus       114 L~  115 (280)
T 1q1c_A          114 IA  115 (280)
T ss_dssp             HT
T ss_pred             Hh
Confidence            85

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=6.4e-13  Score=101.53  Aligned_cols=71  Identities=24%  Similarity=0.361  Sum_probs=62.7

Q ss_pred             hcccceecCCCCCeEEEEeEcCCCC--CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhH
Q 030561           92 AAAELLELPNSGGVKALDLRLGRGP--VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNF  169 (175)
Q Consensus        92 ~~~~~~~l~~~sGv~~~iLk~G~G~--~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~  169 (175)
                      ...+..+++.+++++|+++++|+|.  .++.||.|.+||++++.  ||++||++        .  |+.|.+|.+++|+||
T Consensus         6 ~~~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~--dG~~fds~--------~--p~~f~lG~g~~i~G~   73 (135)
T 2d9f_A            6 SGEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLE--NGTRVQEE--------P--ELVFTLGDCDVIQAL   73 (135)
T ss_dssp             CCSSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEES--SSCEEEEE--------E--EEEEETTSCCSCTTT
T ss_pred             CcccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEEC--CCCEEecC--------C--CEEEEeCCCChhHHH
Confidence            3566777877666999999999997  79999999999999997  69999972        1  999999999999999


Q ss_pred             Hhhhc
Q 030561          170 LVNAI  174 (175)
Q Consensus       170 eeALi  174 (175)
                      +++|.
T Consensus        74 e~~L~   78 (135)
T 2d9f_A           74 DLSVP   78 (135)
T ss_dssp             TTTGG
T ss_pred             HHHHh
Confidence            99985

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}

Probab=99.37  E-value=1e-12  Score=103.87  Aligned_cols=66  Identities=24%  Similarity=0.365  Sum_probs=56.8

Q ss_pred             eecCCCCCeEEEEeEcCCCC--CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561           97 LELPNSGGVKALDLRLGRGP--VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus        97 ~~l~~~sGv~~~iLk~G~G~--~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .+++.++.++|+++++|+|.  .|+.||.|.|||+|++.  ||++||++    .      |+.|.+|.+++|+||+++|.
T Consensus        37 ~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~--dG~~fds~----~------p~~f~lG~g~vi~G~eeaL~  104 (157)
T 2jwx_A           37 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLE--NGTRVQEE----P------ELVFTLGDCDVIQALDLSVP  104 (157)
T ss_dssp             EESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECT--TSCEEEEE----E------EEEEETTTTSSCHHHHHHTT
T ss_pred             ceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEEC--CCCEeecC----C------CEEEEeCCCChhHHHHHHHc
Confidence            34544333589999999997  89999999999999997  69999983    1      99999999999999999985

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=99.35  E-value=4.1e-13  Score=118.11  Aligned_cols=70  Identities=37%  Similarity=0.703  Sum_probs=42.0

Q ss_pred             eecC--CCCCeEEEEeEcCCCCC-CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhh
Q 030561           97 LELP--NSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNA  173 (175)
Q Consensus        97 ~~l~--~~sGv~~~iLk~G~G~~-p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeAL  173 (175)
                      .+++  .++|++++++++|+|.. |+.||.|.|||+|++.  ||++||+|++++    .  |+.|.+|.+++|+||+++|
T Consensus        23 ~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~--~g~~~dss~~~~----~--p~~~~~g~~~~i~g~~~~l   94 (457)
T 1kt0_A           23 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSSHDRN----E--PFVFSLGKGQVIKAWDIGV   94 (457)
T ss_dssp             ----------CEEEC--------CCCBTCEEEEEEEEEC-------CBC------------CEEEETTSTTSCHHHHHHH
T ss_pred             ccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEEC--CCCEEeccCCCC----C--CeEEEeCCcchhhHHHHHH
Confidence            4666  78999999999999987 9999999999999996  799999999764    3  9999999999999999998


Q ss_pred             c
Q 030561          174 I  174 (175)
Q Consensus       174 i  174 (175)
                      +
T Consensus        95 ~   95 (457)
T 1kt0_A           95 A   95 (457)
T ss_dssp             T
T ss_pred             h
Confidence            5

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=99.26  E-value=1.7e-11  Score=106.70  Aligned_cols=70  Identities=23%  Similarity=0.308  Sum_probs=62.3

Q ss_pred             eecCCCCCeEEEEeEcCCC-CCCCCCCeEEEEEEEEEeCCCCcEEeccc-ccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561           97 LELPNSGGVKALDLRLGRG-PVPVDGDQVAIHYYGRLAAKQGWRFDSTY-DHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus        97 ~~l~~~sGv~~~iLk~G~G-~~p~~GD~V~VhYtG~L~~~dG~vFDSS~-d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .+++.++++.++++++|+| ..|+.||.|.+||+|++.  ||++||++. +++    +  |+.|.+|.+++|+|||++|+
T Consensus       238 ~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~--dG~~fd~~~~~~~----~--p~~f~~G~g~~i~G~e~~l~  309 (356)
T 3jxv_A          238 TEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQ--DGTVFLKKGHDEQ----E--PFEFKTDEEAVIEGLDRAVL  309 (356)
T ss_dssp             EEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEES--SSCEEEEESCTTS----C--CCEEETTTTSSCHHHHHHHT
T ss_pred             cccccccceeEEeeecccccCCCCCCCEEEEEEEEEEC--CCCEEeeccccCC----c--CEEEEECCCccchHHHHHHh
Confidence            4566788999999999999 679999999999999998  699999984 332    3  99999999999999999986

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=99.22  E-value=1e-12  Score=114.29  Aligned_cols=67  Identities=37%  Similarity=0.592  Sum_probs=0.0

Q ss_pred             CCCCCeEEEEeEcCCC-CCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          100 PNSGGVKALDLRLGRG-PVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       100 ~~~sGv~~~iLk~G~G-~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .+++|++|+++++|+| ..|+.||.|.+||+|++.  ||++||+|++++.      |+.|.+|.+++|+||+++|.
T Consensus         8 ~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~--dG~~fdss~~~~~------p~~~~lG~g~~i~g~e~~l~   75 (356)
T 3jxv_A            8 IGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLL--DGKKFDSSRDRDD------TFKFKLGQGQVIKGWDQGIK   75 (356)
T ss_dssp             ----------------------------------------------------------------------------
T ss_pred             ECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEEC--CCCEEEEcccCCC------cEEEEeCCCccchHHHHHHh
Confidence            3679999999999999 579999999999999998  6999999998642      99999999999999999985

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}

Probab=99.17  E-value=4.6e-11  Score=86.24  Aligned_cols=52  Identities=33%  Similarity=0.626  Sum_probs=46.9

Q ss_pred             CCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          115 GPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       115 G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      |.+++.||.|.+||++++.  ||++||++++++    .  |+.|.+|.+++|+||+++|+
T Consensus         3 g~~~~~gd~V~v~y~~~~~--dG~~~d~s~~~~----~--p~~f~lG~~~~i~g~~~~l~   54 (102)
T 2pbc_A            3 PIKSRKGDVLHMHYTGKLE--DGTEFDSSLPQN----Q--PFVFSLGTGQVIKGWDQGLL   54 (102)
T ss_dssp             CCCCCTTCEEEEEEEEECT--TSCEEEESTTTT----C--CEEEETTSSSSCHHHHTTST
T ss_pred             CCcCCCCCEEEEEEEEEEC--CCCEEEeCCCCC----C--CEEEEeCCCCccHHHHHHHh
Confidence            4679999999999999986  799999999764    2  99999999999999999986

>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A

Probab=98.96  E-value=1.5e-09  Score=91.41  Aligned_cols=68  Identities=19%  Similarity=0.254  Sum_probs=55.8

Q ss_pred             cccceecCCCCCeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCC---ccHh
Q 030561           93 AAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGK---VSPN  168 (175)
Q Consensus        93 ~~~~~~l~~~sGv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~Gq---VIpG  168 (175)
                      .....+++.++||+++++++|+|. .|..||.|.|||+|++ +  |++||++           |+.|.+|.|+   +++|
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~--g~~fd~~-----------~~~f~lG~g~~~~~~~~   80 (336)
T 1p5q_A           15 VPRGSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-K--DKLFDQR-----------ELRFEIGEGENLDLPYG   80 (336)
T ss_dssp             -------CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-T--TEEEEEE-----------EEEEETTCGGGGTCCHH
T ss_pred             cccceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-C--CEEEecC-----------CeEEEeCCCCccccchH
Confidence            345667789999999999999998 6999999999999998 4  9999975           7999999886   5999


Q ss_pred             HHhhhc
Q 030561          169 FLVNAI  174 (175)
Q Consensus       169 ~eeALi  174 (175)
                      |+++|.
T Consensus        81 ~e~al~   86 (336)
T 1p5q_A           81 LERAIQ   86 (336)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            999985

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}

Probab=98.96  E-value=5.9e-10  Score=89.28  Aligned_cols=50  Identities=24%  Similarity=0.357  Sum_probs=45.9

Q ss_pred             CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          117 VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       117 ~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      ++++||.|.+||++++.  ||++||+|++++.      |+.|.+|.+++|||||++|+
T Consensus        24 ~i~~gd~V~v~Y~g~l~--dG~vfDss~~~~~------P~~f~lG~g~vipG~eeaL~   73 (169)
T 4dt4_A           24 SVQSNSAVLVHFTLKLD--DGTTAESTRNNGK------PALFRLGDASLSEGLEQHLL   73 (169)
T ss_dssp             SCCTTCEEEEEEEEEET--TSCEEEEHHHHTS------CEEEETTSSSSCHHHHHHHT
T ss_pred             cCCCCCEEEEEEEEEEC--CCCEEEecCCCCC------CEEEEECCCCccHHHHHHHc
Confidence            68999999999999997  6999999997642      99999999999999999986

>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1

Probab=98.96  E-value=5.2e-10  Score=83.53  Aligned_cols=49  Identities=18%  Similarity=0.300  Sum_probs=42.9

Q ss_pred             CCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          115 GPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       115 G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      +.++++||.|.+||+|++ |  |++||+++.      .  |+.|.+|.+++||||+++|+
T Consensus        27 ~~~~~~gD~V~v~Y~g~~-d--G~~fdss~~------~--p~~f~lG~g~vi~G~ee~L~   75 (113)
T 1hxv_A           27 DKKLANGDIAIIDFTGIV-D--NKKLASASA------Q--NYELTIGSNSFIKGFETGLI   75 (113)
T ss_dssp             --CCCSSEEEEEEEEEEE-T--TEECSTTCC------S--EEEEEETSSCSCTTHHHHHH
T ss_pred             CCCCCCCCEEEEEEEEEE-C--CEEcccCCc------c--CEEEEECCCChhHHHHHHHC
Confidence            567899999999999998 4  999999962      2  99999999999999999986

>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}

Probab=98.93  E-value=1.8e-09  Score=84.31  Aligned_cols=51  Identities=18%  Similarity=0.284  Sum_probs=45.6

Q ss_pred             CCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          116 PVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       116 ~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .+++.||.|.+||++++.. +|++||+|++..       |+.|.+|.+++||||+++|+
T Consensus         5 ~~i~~gd~V~v~Y~g~~~~-dG~~fdss~~~~-------p~~f~~G~g~vipg~e~aL~   55 (151)
T 2kr7_A            5 DLESIKQAALIEYEVREQG-SSIVLDSNISKE-------PLEFIIGTNQIIAGLEKAVL   55 (151)
T ss_dssp             CCTTSCCEEEEEEEEEESS-CSCEEEESTTTC-------CEEEETTCCCSCHHHHHHHT
T ss_pred             cCCCCCCEEEEEEEEEECC-CCCEEEeCCCCc-------CEEEEECCCCccHHHHHHHc
Confidence            4588999999999999873 599999998752       99999999999999999986

>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A

Probab=98.92  E-value=1.1e-09  Score=86.49  Aligned_cols=54  Identities=26%  Similarity=0.346  Sum_probs=44.1

Q ss_pred             CCCCCeEEEEEEEEEeCCCCcEEecccccC-------CCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          118 PVDGDQVAIHYYGRLAAKQGWRFDSTYDHK-------DQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       118 p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~-------~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      +++||.|.+||+|++ +  |++||+|++..       ...+.+.|+.|.+|.+++|||||++|+
T Consensus         2 i~~Gd~V~v~Y~g~l-d--G~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~   62 (157)
T 3pr9_A            2 VEKGKMVKISYDGYV-D--GKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAIL   62 (157)
T ss_dssp             CCTTCEEEEEEEEEE-T--TEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHH
T ss_pred             CCCCCEEEEEEEEEE-C--CEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHc
Confidence            678999999999999 5  99999998630       001112399999999999999999985

>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1

Probab=98.84  E-value=1.3e-09  Score=85.16  Aligned_cols=56  Identities=23%  Similarity=0.479  Sum_probs=44.2

Q ss_pred             CCCCCCeEEEEEEEEEeCCCCcEEeccccc-----C--CCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          117 VPVDGDQVAIHYYGRLAAKQGWRFDSTYDH-----K--DQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       117 ~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~-----~--~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      ++++||.|.+||+|++.  ||++||+|++.     +  .....+.|+.|.+|.+++|+|||++|+
T Consensus         1 ~i~~gd~V~v~Y~g~~~--dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~   63 (151)
T 1ix5_A            1 MVDKGVKIKVDYIGKLE--SGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVL   63 (151)
T ss_dssp             CCCTTCEEEECCEECCT--TSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHH
T ss_pred             CCCCCCEEEEEEEEEEC--CCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHc
Confidence            36799999999999986  79999999741     0  000011299999999999999999985

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=98.80  E-value=1.1e-08  Score=86.89  Aligned_cols=60  Identities=22%  Similarity=0.319  Sum_probs=54.4

Q ss_pred             CCCCeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCC---ccHhHHhhhc
Q 030561          101 NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGK---VSPNFLVNAI  174 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~Gq---VIpG~eeALi  174 (175)
                      .++++.++++++|+|. .|+.||.|.+||+|++   ||++||+   .        |+.|.+|.|+   +|+|||++|+
T Consensus       166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~---dG~~fd~---~--------~~~f~lG~g~~~~~i~G~e~~l~  229 (280)
T 1q1c_A          166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY---KDKLFDQ---R--------ELRFEIGEGENLDLPYGLERAIQ  229 (280)
T ss_dssp             CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE---TTEEEEE---E--------EEEEETTCGGGGTCCHHHHHHHT
T ss_pred             cccceeEEeeecccccccccCCceEEEEEEEEe---CCEEEec---C--------CeEEEecCCcccccchhHHHHHh
Confidence            7889999999999998 5999999999999997   3999996   1        8999999987   5999999985

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=98.27  E-value=2e-06  Score=75.40  Aligned_cols=63  Identities=30%  Similarity=0.464  Sum_probs=54.1

Q ss_pred             ecCCCCCeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCC---CccHhHHhhh
Q 030561           98 ELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSG---KVSPNFLVNA  173 (175)
Q Consensus        98 ~l~~~sGv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~G---qVIpG~eeAL  173 (175)
                      +++.++++.++++++|+|. .|..||.|.+||+|++ +  |++||+.           ++.|.+|.|   ++++||++||
T Consensus       141 ~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~--g~~f~~~-----------~~~f~~g~g~~~~v~~~~e~al  206 (457)
T 1kt0_A          141 DLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-G--GRMFDCR-----------DVAFTVGEGEDHDIPIGIDKAL  206 (457)
T ss_dssp             ETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-T--TEEEEEE-----------EEEEETTCGGGGTCCHHHHHHH
T ss_pred             cccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-C--CeEEecC-----------ceEEEeCCCccccCChHHHHHH
Confidence            4557789999999999985 5999999999999998 4  8999962           689999976   5899999998


Q ss_pred             c
Q 030561          174 I  174 (175)
Q Consensus       174 i  174 (175)
                      .
T Consensus       207 ~  207 (457)
T 1kt0_A          207 E  207 (457)
T ss_dssp             T
T ss_pred             H
Confidence            5

>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5

Probab=98.14  E-value=1.6e-06  Score=77.62  Aligned_cols=49  Identities=22%  Similarity=0.443  Sum_probs=43.5

Q ss_pred             CCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          115 GPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       115 G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      +.+++.||.|.+||+|+.   ||+.|++++.      .  |+.|.+|.|++||||+++|+
T Consensus       155 ~~~~~~gD~V~i~y~g~~---dG~~fd~~~~------~--~~~~~lG~g~~ipgfee~L~  203 (432)
T 1w26_A          155 DGAVEAEDRVTIDFTGSV---DGEEFEGGKA------S--DFVLAMGQGRMIPGFEDGIK  203 (432)
T ss_dssp             SSCCCTTCEEEECEEEES---SSCBCSSCCC------S--SEEEETTSCCSCTTHHHHSS
T ss_pred             CCCCCCCCEEEEEEEEee---CCeEccCCCc------c--ceEEEeCCCCcchHHHHHhC
Confidence            456899999999999993   6999999873      2  99999999999999999986

>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A

Probab=98.07  E-value=1.8e-06  Score=76.43  Aligned_cols=48  Identities=23%  Similarity=0.542  Sum_probs=42.3

Q ss_pred             CCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          116 PVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       116 ~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .+++.||.|.+||+|+.   ||+.|+++...        |+.|.+|.|++||||+++|+
T Consensus       159 ~~~~~gD~V~i~y~g~~---dG~~fd~~~~~--------~~~~~lG~g~~ipgfee~L~  206 (392)
T 1t11_A          159 EAAENGKRVSIDFVGSI---DGVEFEGGKAE--------NFPLEMGAGRMIPGFEDGIV  206 (392)
T ss_dssp             CCCCTTCEEEEEEEEES---SSSCCTTCEEE--------EEEEETTSCCBSTTSGGGTT
T ss_pred             CCCCCCCEEEEEEEEEE---CCEEccCCCcc--------ceEEEecCCCcchhHHHHhC
Confidence            46889999999999993   59999988432        99999999999999999986

>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A

Probab=97.60  E-value=4.4e-05  Score=63.71  Aligned_cols=56  Identities=20%  Similarity=0.210  Sum_probs=35.0

Q ss_pred             CCCCCeEEEEEEEEEeCCCC-cEEeccc--ccC--CCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          118 PVDGDQVAIHYYGRLAAKQG-WRFDSTY--DHK--DQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       118 p~~GD~V~VhYtG~L~~~dG-~vFDSS~--d~~--~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      +++||.|.+||+|++...-= +- ...-  +.+  +..+.+.|+.|.+|.|++|||||++|+
T Consensus         2 i~~Gd~V~v~Y~g~ldG~vfDss-~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~   62 (231)
T 3prb_A            2 VEKGKMVKISYDGYVDGKLFDTT-NEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAIL   62 (231)
T ss_dssp             CCTTCEEEEEEEEEETTEEEEES-CHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHH
T ss_pred             CCCCCEEEEEEEEEECCEEEEec-cchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHc
Confidence            67899999999999910000 00 0000  000  001112399999999999999999985

>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}

Probab=95.05  E-value=0.018  Score=45.54  Aligned_cols=26  Identities=19%  Similarity=0.121  Sum_probs=23.8

Q ss_pred             CCCCCeEEEEEEEEEeCCCCcEEecccc
Q 030561          118 PVDGDQVAIHYYGRLAAKQGWRFDSTYD  145 (175)
Q Consensus       118 p~~GD~V~VhYtG~L~~~dG~vFDSS~d  145 (175)
                      +++||.|.+||++++.  +|++||+|++
T Consensus         3 i~~gd~V~v~Y~g~~~--dG~~fdss~~   28 (171)
T 2k8i_A            3 VAKDLVVSLAYQVRTE--DGVLVDESPV   28 (171)
T ss_dssp             CCTTEEEEEEEEEEET--TSCEEEECCS
T ss_pred             CCCCCEEEEEEEEEEC--CCCEEeeccC
Confidence            6799999999999987  6999999986

>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*

Probab=93.72  E-value=0.04  Score=42.88  Aligned_cols=24  Identities=21%  Similarity=0.165  Sum_probs=21.7

Q ss_pred             CCCCCeEEEEEEEEEeCCCCcEEeccc
Q 030561          118 PVDGDQVAIHYYGRLAAKQGWRFDSTY  144 (175)
Q Consensus       118 p~~GD~V~VhYtG~L~~~dG~vFDSS~  144 (175)
                      +++||.|.+||+++ .  ||++||+|+
T Consensus         3 i~~gd~V~v~Y~g~-~--dG~~fdss~   26 (158)
T 3cgm_A            3 VGQDKVVTIRYTLQ-V--EGEVLDQGE   26 (158)
T ss_dssp             CCTTEEEEEEEEEE-E--TTEEEEEEE
T ss_pred             CCCCCEEEEEEEEE-E--CCEEEEeeE
Confidence            67899999999999 6  799999984

>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A

Probab=93.02  E-value=0.058  Score=48.09  Aligned_cols=44  Identities=11%  Similarity=0.180  Sum_probs=35.8

Q ss_pred             CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          117 VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       117 ~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .++.||.|.++|+|+ .  ||..|+++...        ++.+.+|.++  + |+++|+
T Consensus       154 ~a~~gD~V~id~~~~-~--dG~~~~~~~~~--------~~~l~~g~~~--~-fe~~li  197 (433)
T 3gty_X          154 PAEAGDLVRVNMEVY-N--EEGKKLTSREY--------EYVISEDEDR--P-FVKDLV  197 (433)
T ss_dssp             CCCTTSEEEEEEEEE-C--TTSCEEEEEEE--------EEECCSSCCC--T-THHHHT
T ss_pred             ccCCCCEEEEEEEEE-E--CCEECcCCCCC--------CeEEEecCCc--h-HHHHhC
Confidence            578999999999998 3  69999976432        7888899887  4 888875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	175
d1ix5a_	151	d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcu	4e-06
d1kt1a3	115	d.26.1.1 (A:139-253) FKBP51, N-terminal domains {M	4e-05
d1yata_	113	d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeas	1e-04
d1q1ca1	120	d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Hu	1e-04
d1r9ha_	118	d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabd	1e-04
d1pbka_	116	d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId:	3e-04
d1kt1a2	111	d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Mo	7e-04
d1q1ca2	117	d.26.1.1 (A:141-257) FKBP52, N-terminal domains {H	0.001

>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]} Length = 151

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Archaeal FKBP
species: Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]

 Score = 42.1 bits (98), Expect = 4e-06
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 9/57 (15%)

Query: 120 DGDQVAIHYYGRLAAKQGWRFDSTYDHK-------DQSGEPIPFLFILGSGKVSPNF 169
            G ++ + Y G+L  + G  FD++ +             E  P  F++G G++   F
Sbjct: 4   KGVKIKVDYIGKL--ESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGF 58

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 115

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 38.9 bits (90), Expect = 4e-05
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 98  ELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIP 155
           +L   GG+     R G G   P +G +V IH  GR   +     D  +   +     IP
Sbjct: 3   DLLEDGGIIRRTKRRGEGYSNPNEGARVQIHLEGRCGGRVFDCRDVAFTVGEGEDHDIP 61

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 113

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%)

Query: 94  AELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQ 149
           +E++E    G VK   +  G G   P  GD V IHY G    + G +FDS+ D    
Sbjct: 1   SEVIE----GNVKIDRISPGDGATFPKTGDLVTIHYTGT--LENGQKFDSSVDRGSP 51

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 1e-04
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 103 GGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQ 149
            GV  +  R G G  +P+ GD+V +HY G L    G +FDS+ D KD+
Sbjct: 11  EGVLKVIKREGTGTEMPMIGDRVFVHYTGWLL--DGTKFDSSLDRKDK 56

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]} Length = 118

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 37.8 bits (87), Expect = 1e-04
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 103 GGVKALDLRLGRG-PVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQ 149
           GGV  L  + G+G   P  G  V +HY G L  + G +FDS+ D  DQ
Sbjct: 10  GGVLKLIKKEGQGVVKPTTGTTVKVHYVGTL--ENGTKFDSSRDRGDQ 55

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]} Length = 116

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 3e-04
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 110 LRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYD---HKDQSGEPIPF 156
           L+ G     P  GD V   Y G L  + G  FD+       K ++ +P+ F
Sbjct: 8   LKKGDKTNFPKKGDVVHCWYTGTL--QDGTVFDTNIQTSAKKKKNAKPLSF 56

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 111

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 35.5 bits (81), Expect = 7e-04
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 9/68 (13%)

Query: 103 GGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILG 161
            GV  +  R+G G   P+ GD+V +HY G+LA   G +FDS++D  +       F+F +G
Sbjct: 4   RGVLKIVKRVGHGEETPMIGDRVYVHYNGKLA--NGKKFDSSHDRNEP------FVFSIG 55

Query: 162 SGKVSPNF 169
            G+V   +
Sbjct: 56  KGQVIKAW 63

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.001
 Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 8/55 (14%)

Query: 103 GGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPF 156
           GG+       G G   P +G  V +         +G+  D  +D ++   E    
Sbjct: 8   GGIIRRIQTRGEGYAKPNEGAIVEVAL-------EGYYKDKLFDQRELRFEIGEG 55

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	175
d1q1ca1	120	FKBP52, N-terminal domains {Human (Homo sapiens) [	99.57
d1u79a_	125	FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId:	99.57
d1q6ha_	210	Peptidyl-prolyl cis-trans isomerase FkpA {Escheric	99.56
d1r9ha_	118	FKB-6, N-terminal domain {Caenorhabditis elegans [	99.55
d1fd9a_	204	Macrophage infectivity potentiator protein (MIP) {	99.52
d1yata_	113	Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyc	99.52
d2ppna1	107	FK-506 binding protein (FKBP12), an immunophilin {	99.52
d1kt1a2	111	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.48
d1pbka_	116	FKBP25 {Human (Homo sapiens) [TaxId: 9606]}	99.48
d1jvwa_	160	Macrophage infectivity potentiator protein (MIP) {	99.33
d1kt1a3	115	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.13
d1ix5a_	151	Archaeal FKBP {Archaeon Methanococcus thermolithot	98.87
d1q1ca2	117	FKBP52, N-terminal domains {Human (Homo sapiens) [	98.85
d1hxva_	85	Trigger factor PPIase domain {Mycoplasma genitaliu	98.4
d1l1pa_	106	Trigger factor PPIase domain {Escherichia coli [Ta	97.18
d1t11a3	113	Trigger factor PPIase domain {Vibrio cholerae [Tax	97.16

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=5.2e-15  Score=110.04  Aligned_cols=69  Identities=38%  Similarity=0.617  Sum_probs=62.4

Q ss_pred             ecC--CCCCeEEEEeEcCCCCC-CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561           98 ELP--NSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus        98 ~l~--~~sGv~~~iLk~G~G~~-p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      |++  .++||.++++++|+|.. |..||.|.+||++++.  ||++||||++++.      |+.|.+|.+++|+||+++|.
T Consensus         4 d~t~~~d~gv~~~i~~~G~G~~~P~~gd~V~v~y~~~l~--dG~~fdss~~~~~------p~~f~~g~~~~i~G~~~~l~   75 (120)
T d1q1ca1           4 DISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLL--DGTKFDSSLDRKD------KFSFDLGKGEVIKAWDIAIA   75 (120)
T ss_dssp             ECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEET--TSCEEEESTTSSS------CEEEETTTTSSCHHHHHHHT
T ss_pred             eccCCCCCCEEEEEEEcccCCcCCCCCCEEEEEEEEEEc--CCCEEEecccccc------ceeeecCCCceeeeeeeeec
Confidence            444  47999999999999965 8999999999999998  6999999998753      99999999999999999985

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.57  E-value=1.7e-15  Score=112.44  Aligned_cols=65  Identities=32%  Similarity=0.610  Sum_probs=61.2

Q ss_pred             CCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhh
Q 030561          101 NSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNA  173 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeAL  173 (175)
                      +++||+|+++++|+|++|+.||+|.|||++++.  ||++||+|++.+.      |+.|.+|.+.+|+||++++
T Consensus         6 ~psGl~y~~~~~G~G~~p~~gd~V~v~y~g~l~--~G~~fdss~~~~~------p~~~~~g~~~~i~g~~~~i   70 (125)
T d1u79a_           6 SPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLE--NGKVFDSSYNRGK------PLTFRIGVGEVIKGWDQGI   70 (125)
T ss_dssp             CTTSCEEEEEECCSSCBCCTTCEEEEEEEEECT--TSCEEEEHHHHTS------CEEEETTSSSSCHHHHHHH
T ss_pred             CCCCCEEEEEEeccCCCCCCCCEEEEEEEeeec--CCcEEecccccCc------ceeEecCccccccchhhhc
Confidence            679999999999999999999999999999998  6999999998753      9999999999999999987

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=5.1e-15  Score=119.28  Aligned_cols=77  Identities=27%  Similarity=0.437  Sum_probs=67.3

Q ss_pred             cHHHHHhcccceecCCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCc
Q 030561           86 SSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV  165 (175)
Q Consensus        86 ~~~~~~~~~~~~~l~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqV  165 (175)
                      +.+.++.+.++..+  ++|++|+++++|+|+.|..||.|.|||+|++.  ||++||+|++++.      |+.|.+|  ++
T Consensus        92 ~l~~~~~~~~v~~~--~sGl~y~v~~~G~G~~p~~gd~v~v~y~g~l~--dG~~fd~s~~~~~------p~~~~~~--~v  159 (210)
T d1q6ha_          92 YREKFAKEKGVKTS--STGLVYQVVEAGKGEAPKDSDTVVVNYKGTLI--DGKEFDNSYTRGE------PLSFRLD--GV  159 (210)
T ss_dssp             HHHHHHHSTTEEEC--TTSCEEEEEECCSSCCCCTTCEEEEEEEEEET--TSCEEEEGGGGTS------CEEEEGG--GS
T ss_pred             HHHhhcccCceEEc--cCceEEEEeeCCCCCCCCCCceEEEEEEEEEc--CCCEEeecccCCC------cceeccC--cc
Confidence            45556666666654  59999999999999999999999999999999  6999999998753      9999996  79


Q ss_pred             cHhHHhhhc
Q 030561          166 SPNFLVNAI  174 (175)
Q Consensus       166 IpG~eeALi  174 (175)
                      |+||+++|.
T Consensus       160 i~g~~e~l~  168 (210)
T d1q6ha_         160 IPGWTEGLK  168 (210)
T ss_dssp             CHHHHHHGG
T ss_pred             chhHHHHHh
Confidence            999999985

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.55  E-value=4.8e-15  Score=109.81  Aligned_cols=66  Identities=38%  Similarity=0.638  Sum_probs=61.1

Q ss_pred             CCCCeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          101 NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .++||.|+++++|+|. .|..||.|.+||++++.  ||++||+|++++.      |+.|.+|.+++|+||+++|.
T Consensus         8 ~d~Gl~~~il~~G~G~~~p~~gd~V~v~y~~~l~--dG~v~dss~~~~~------p~~f~~g~~~vi~G~~~~l~   74 (118)
T d1r9ha_           8 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLE--NGTKFDSSRDRGD------QFSFNLGRGNVIKGWDLGVA   74 (118)
T ss_dssp             CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEET--TSCEEEEHHHHTS------CEEEETTTTSSCHHHHHHHT
T ss_pred             CCCCEEEEEEECcCCCCCCCCCCEEEEEEEEEEc--CCCEEEEccccce------eeeeeccCcceeeeeeeeee
Confidence            5799999999999996 59999999999999998  6999999998753      99999999999999999985

>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Legionella pneumophila [TaxId: 446]

Probab=99.52  E-value=9.6e-15  Score=117.04  Aligned_cols=77  Identities=26%  Similarity=0.376  Sum_probs=66.7

Q ss_pred             cHHHHHhcccceecCCCCCeEEEEeEcCCCCCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCc
Q 030561           86 SSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV  165 (175)
Q Consensus        86 ~~~~~~~~~~~~~l~~~sGv~~~iLk~G~G~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqV  165 (175)
                      +.+.+...+++.++  ++|++|+++++|+|..|..||+|.|||+|++.  ||++||+|++++.      |+.|.+|  ++
T Consensus        83 fl~~~~~~~~v~~~--~sGl~y~v~~~G~G~~p~~~d~v~v~y~g~l~--dg~~f~~s~~~~~------p~~~~~~--~~  150 (204)
T d1fd9a_          83 FLTENKNKPGVVVL--PSGLQYKVINSGNGVKPGKSDTVTVEYTGRLI--DGTVFDSTEKTGK------PATFQVS--QV  150 (204)
T ss_dssp             HHHHHHHSTTEEEC--TTSCEEEEEECCCSCCCCTTCEEEEEEEEEET--TSCEEEEHHHHCS------CEEEEGG--GS
T ss_pred             HHHhcccCCceEEe--cCccEEEEeecCCCcccCCCCEEEEEEEEEEC--CCCEecccccCCC------CceecCC--cc
Confidence            56666666666554  59999999999999999999999999999999  6999999998753      9998875  79


Q ss_pred             cHhHHhhhc
Q 030561          166 SPNFLVNAI  174 (175)
Q Consensus       166 IpG~eeALi  174 (175)
                      |+||+++|.
T Consensus       151 i~G~~e~l~  159 (204)
T d1fd9a_         151 IPGWTEALQ  159 (204)
T ss_dssp             CHHHHHHHT
T ss_pred             chhHHHHhc
Confidence            999999985

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=1.4e-14  Score=105.93  Aligned_cols=66  Identities=38%  Similarity=0.601  Sum_probs=60.9

Q ss_pred             CCCCeEEEEeEcCCCCC-CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          101 NSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~~-p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .++|++++++++|+|.+ |+.||.|.+||++++.  ||++||+++++..      |+.|.++.+++|+||+++|.
T Consensus         4 ~d~gl~~~~l~~G~G~~~P~~gd~V~v~y~~~~~--dG~~~ds~~~~~~------~~~~~~~~~~~i~G~~~~l~   70 (113)
T d1yata_           4 IEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLE--NGQKFDSSVDRGS------PFQCNIGVGQVIKGWDVGIP   70 (113)
T ss_dssp             CGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEET--TSCEEEESTTTTC------CEEEETTSSSSCHHHHHHGG
T ss_pred             ccCCcEEEEEECccCCcCCCCCCEEEEEEEEEEe--cCcEEeccccCCc------eEeeeeccCceeeehhhhcc
Confidence            46899999999999976 8999999999999998  6999999998753      99999999999999999985

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.2e-14  Score=105.58  Aligned_cols=63  Identities=33%  Similarity=0.623  Sum_probs=58.4

Q ss_pred             CeEEEEeEcCCCCC-CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          104 GVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       104 Gv~~~iLk~G~G~~-p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      |++|+++++|+|.+ |+.||.|.+||++++.  ||++||+|++++.      |+.|.+|.+++|+||+++|.
T Consensus         1 Gv~~~~l~~G~G~~~p~~gd~V~v~y~g~l~--dG~~~d~s~~~~~------p~~~~~g~~~~i~G~~~~l~   64 (107)
T d2ppna1           1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLE--DGKKFDSSRDRNK------PFKFMLGKQEVIRGWEEGVA   64 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEET--TSCEEEEHHHHTS------CEEEETTSCCSCHHHHHHHT
T ss_pred             CcEEEEEECcCCccCCCCCCEEEEEEEEEec--CCeEEEeeeccce------eeeEeeCcchhheeehhhhc
Confidence            79999999999976 8999999999999998  6999999998753      99999999999999999984

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.48  E-value=6.9e-15  Score=107.61  Aligned_cols=66  Identities=38%  Similarity=0.732  Sum_probs=46.5

Q ss_pred             CCCCeEEEEeEcCCCCC-CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          101 NSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~~-p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .++|+.++++++|+|.. |..||.|.+||++++.  ||++||+|++++.      |+.|.+|.+++|+||+++|.
T Consensus         2 ~d~Gi~~~i~~~G~g~~~P~~gd~V~v~y~~~l~--dG~~~dss~~~~~------p~~f~lg~~~~i~G~~~~l~   68 (111)
T d1kt1a2           2 KDRGVLKIVKRVGHGEETPMIGDRVYVHYNGKLA--NGKKFDSSHDRNE------PFVFSIGKGQVIKAWDIGVA   68 (111)
T ss_dssp             CSCSCEEEC----CCSCCCCTTCEEEEECCCCSC--C------------------CEEEETTSSSSCHHHHHSTT
T ss_pred             CCCCeEEEEEEcccCCcCCCCCCEEEEEEEEEEC--CCCEEEEEEecce------eeeeecCCCcEEeeeeeeeh
Confidence            46899999999999965 8999999999999998  6999999998753      99999999999999999985

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=7.4e-14  Score=102.47  Aligned_cols=69  Identities=26%  Similarity=0.389  Sum_probs=58.3

Q ss_pred             CeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCC-CCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKD-QSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       104 Gv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~-~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      ++.++++++|+|. .|+.||.|.|||++++.  ||++||+|++... .....+|+.|.+|.+++|+||+++|.
T Consensus         2 ~~~k~vl~~G~G~~~P~~gd~V~v~y~~~l~--dG~~fdss~~~~~~~~~~~~p~~f~lg~~~~i~Gl~~~v~   72 (116)
T d1pbka_           2 KYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQ--DGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALL   72 (116)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEECT--TSCEEEECCCSSCCTTTSSCCEEEETTTTSSCHHHHHHHT
T ss_pred             cceEEEEecCCCCCCCCCCCEEEEEEEEEEC--CCCEeecccccccccccCCCceeeeecccccccchheech
Confidence            4789999999996 59999999999999998  6999999986421 11123499999999999999999985

>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.33  E-value=6.8e-13  Score=102.88  Aligned_cols=76  Identities=25%  Similarity=0.394  Sum_probs=62.5

Q ss_pred             HHHHHhcccceecCCCCCeEEEEeEcCCCCC-CCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCc
Q 030561           87 SAAAAAAAELLELPNSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKV  165 (175)
Q Consensus        87 ~~~~~~~~~~~~l~~~sGv~~~iLk~G~G~~-p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqV  165 (175)
                      .+.+....++..+  ++||.|+++++|+|.. |..||+|.|||+|++.  ||++||++++...      |+  .++.+++
T Consensus        20 ~~~~~~~~~~~~~--~sGl~y~il~~G~G~~~P~~gd~V~v~Y~g~l~--dG~~fds~~~~~~------p~--~~~~~~~   87 (160)
T d1jvwa_          20 MEQKAAQPDAVKL--PSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLR--DGTVFDSSRERGK------PT--TFRPNEV   87 (160)
T ss_dssp             HHHHHHSTTEEEC--TTSCEEEEEECCCCSBCCCTTCCEEEEEEEECT--TSCEEEEHHHHTS------CE--EECGGGS
T ss_pred             HHHhccCCCCEEC--CCCCEEEEEECcccccCCCCCcceEEEEEEEEc--cCCeeeeeccccC------cc--ccCcccc
Confidence            3445556666554  6999999999999975 8999999999999998  6999999987642      75  4566799


Q ss_pred             cHhHHhhhc
Q 030561          166 SPNFLVNAI  174 (175)
Q Consensus       166 IpG~eeALi  174 (175)
                      |+||+++|.
T Consensus        88 i~G~~e~l~   96 (160)
T d1jvwa_          88 IKGWTEALQ   96 (160)
T ss_dssp             CHHHHHHHT
T ss_pred             chhHHHHhc
Confidence            999999984

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.13  E-value=7.8e-11  Score=85.20  Aligned_cols=64  Identities=28%  Similarity=0.405  Sum_probs=53.7

Q ss_pred             eecCCCCCeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCC---CCccHhHHhh
Q 030561           97 LELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGS---GKVSPNFLVN  172 (175)
Q Consensus        97 ~~l~~~sGv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~---GqVIpG~eeA  172 (175)
                      .+++.++||.++++++|+|. .|+.||+|.+||++++   +|++|+++           ++.|.++.   +++|+||+++
T Consensus         2 e~~~~D~gi~k~il~~G~G~~~p~~gd~V~v~y~g~~---~g~~~~~~-----------~~~~~~~~~~~~~vi~G~~~~   67 (115)
T d1kt1a3           2 EDLLEDGGIIRRTKRRGEGYSNPNEGARVQIHLEGRC---GGRVFDCR-----------DVAFTVGEGEDHDIPIGIDKA   67 (115)
T ss_dssp             EETTSSSSEEEEEEECCCCSSCCCTTCEEEEEEEEEE---TTEEEEEE-----------EEEEETTCGGGGTCCHHHHHH
T ss_pred             CccccCCCEEEEEEEeecCCCCCCCCCEEEEEEEEEe---CCcccccc-----------ccCceeeeccccccCchhHhh
Confidence            46788999999999999995 7999999999999996   37888753           45666664   4699999999


Q ss_pred             hc
Q 030561          173 AI  174 (175)
Q Consensus       173 Li  174 (175)
                      |.
T Consensus        68 l~   69 (115)
T d1kt1a3          68 LE   69 (115)
T ss_dssp             HT
T ss_pred             hc
Confidence            85

>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Archaeal FKBP
species: Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]

Probab=98.87  E-value=3.8e-10  Score=86.44  Aligned_cols=55  Identities=24%  Similarity=0.474  Sum_probs=45.5

Q ss_pred             CCCCCeEEEEEEEEEeCCCCcEEecccccC-------CCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          118 PVDGDQVAIHYYGRLAAKQGWRFDSTYDHK-------DQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       118 p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~-------~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      +++||.|.+||++++.  ||++||||++..       .....+.|+.|.+|.|++|||||++|+
T Consensus         2 v~~G~~V~v~Y~~~~~--~G~~fdsT~e~~~~~~~~~~~~~~~~P~~f~~G~g~~ipglE~al~   63 (151)
T d1ix5a_           2 VDKGVKIKVDYIGKLE--SGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVL   63 (151)
T ss_dssp             CCTTCEEEECCEECCT--TSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHH
T ss_pred             ccCCCEEEEEEEEEEC--CCCEEEeCchHhcccccccccccCCCCEEEEecCCCccHHHHHHHH
Confidence            6799999999999997  799999998531       011234499999999999999999985

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=4.7e-09  Score=75.90  Aligned_cols=60  Identities=20%  Similarity=0.257  Sum_probs=48.2

Q ss_pred             CCCCeEEEEeEcCCCC-CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCC---CCccHhHHhhhc
Q 030561          101 NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGS---GKVSPNFLVNAI  174 (175)
Q Consensus       101 ~~sGv~~~iLk~G~G~-~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~---GqVIpG~eeALi  174 (175)
                      .++||.++++++|+|. .|..||.|.|||++++.  +| .|+++           +..|..+.   .++|+||+++|.
T Consensus         6 ~D~gi~~~il~~G~G~~~p~~gd~V~v~y~g~~~--~~-~~~~~-----------~~~~~~~~~~~~~~i~Gl~~~l~   69 (117)
T d1q1ca2           6 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYK--DK-LFDQR-----------ELRFEIGEGENLDLPYGLERAIQ   69 (117)
T ss_dssp             CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEET--TE-EEEEE-----------EEEEETTCGGGGTCCHHHHHHHT
T ss_pred             CCCCEEEEEEeeecCCCCCCCCCEEEEEEEEEeC--CC-cEeec-----------cccceeeecceeeeCcHHHHhhh
Confidence            5799999999999995 69999999999999997  45 56654           33444443   479999999985

>d1hxva_ d.26.1.1 (A:) Trigger factor PPIase domain {Mycoplasma genitalium [TaxId: 2097]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Mycoplasma genitalium [TaxId: 2097]

Probab=98.40  E-value=1.2e-07  Score=65.45  Aligned_cols=47  Identities=19%  Similarity=0.321  Sum_probs=41.1

Q ss_pred             CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          117 VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       117 ~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      ++.+||.|.|+|+|++   ||+.|+++...        .+.|.+|.+++||||+++|+
T Consensus         1 k~a~GD~V~idy~g~~---dG~~~~~~~~~--------~~~~~lg~~~~ipgf~~~l~   47 (85)
T d1hxva_           1 KLANGDIAIIDFTGIV---DNKKLASASAQ--------NYELTIGSNSFIKGFETGLI   47 (85)
T ss_dssp             CCCSSEEEEEEEEEEE---TTEECSTTCCS--------EEEEEETSSCSCTTHHHHHH
T ss_pred             CCCCCCEEEEEEEEEE---CCEEccccccc--------CCCEEECCcccCchHHHHhc
Confidence            4679999999999996   49999987543        68899999999999999986

>d1l1pa_ d.26.1.1 (A:) Trigger factor PPIase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=7.4e-05  Score=53.13  Aligned_cols=48  Identities=23%  Similarity=0.449  Sum_probs=39.9

Q ss_pred             CCCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          116 PVPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       116 ~~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      .+++.||.|.|+|+|+.   ||+.++.....        -+.|.+|.+.+++||+++|+
T Consensus        13 r~a~~GD~v~id~~~~~---dG~~~~~~~~~--------~~~~~lg~~~~~~gf~~~L~   60 (106)
T d1l1pa_          13 GAVEAEDRVTIDFTGSV---DGEEFEGGKAS--------DFVLAMGQGRMIPGFEDGIK   60 (106)
T ss_dssp             SSCCTTEEEEEEEECCS---SSSCCSTTEEE--------EEEEEETTSCCCTTHHHHTT
T ss_pred             ccccCCCEEEEEEEEEE---CCEECCCCccc--------ceEEEecCCCccchHHHHhc
Confidence            45789999999999975   48888754322        58899999999999999986

>d1t11a3 d.26.1.1 (A:135-247) Trigger factor PPIase domain {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Vibrio cholerae [TaxId: 666]

Probab=97.16  E-value=0.00011  Score=52.53  Aligned_cols=47  Identities=23%  Similarity=0.557  Sum_probs=39.6

Q ss_pred             CCCCCCeEEEEEEEEEeCCCCcEEecccccCCCCCCCcCEEEEeCCCCccHhHHhhhc
Q 030561          117 VPVDGDQVAIHYYGRLAAKQGWRFDSTYDHKDQSGEPIPFLFILGSGKVSPNFLVNAI  174 (175)
Q Consensus       117 ~p~~GD~V~VhYtG~L~~~dG~vFDSS~d~~~~~G~~~P~~F~LG~GqVIpG~eeALi  174 (175)
                      +++.||.|.|+|.+++   ||+.|+..-..        .+.|.+|.++.++||+++|+
T Consensus        23 ~a~~gD~v~id~~~~~---dG~~~~~~~~~--------~~~~~lg~~~~~~~f~~~L~   69 (113)
T d1t11a3          23 AAENGKRVSIDFVGSI---DGVEFEGGKAE--------NFPLEMGAGRMIPGFEDGIV   69 (113)
T ss_dssp             CCCTTCEEEEEEEEES---SSSCCTTCEEE--------EEEEETTSCCBSTTSGGGTT
T ss_pred             cccCCCEEEEEEEEEE---CCEEccCCccc--------eEEEEeccccccccHHHhhc
Confidence            4789999999999996   48888754322        68899999999999999986