Citrus Sinensis ID: 030661

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170---
MDVPLPLEKLSLESKTQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTGKKQNYIFPPCSASVELSCMSVSLCLIYLIFHKYSCIYETDKHITSY
ccccccHHHHccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccHHHHHHHHHHHHcccccEEEEcccccccccccHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHccccEEEEEEEccccccccccccccccc
ccccccHHHHHHHcccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEEccccccccccccccHHHHHHHHHHHHccccEEEEcccHHHcccHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHccccHHHEEHHHHccccEEEEccccEccc
mdvplpleklslesktqGKTYVVLVAtgsfnpptfMHLRMFELARDTlnsegycviggymspvndaykkrglisAEHRINLCNlackssdfimvdpweanqsgyqRTLTVLSRVKNFLIEAGlistgkkqnyifppcsasveLSCMSVSLCLIYLIFHKYSciyetdkhitsy
mdvplpleklslesktqgKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGlistgkkqnyiFPPCSASVELSCMSVSLCLIYLIFHKYSCIYETDKHITSY
MDVPLPLEKLSLESKTQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTGKKQNYIFPPCSASVELSCMSVSLCLIYLIFHKYSCIYETDKHITSY
******************KTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTGKKQNYIFPPCSASVELSCMSVSLCLIYLIFHKYSCIYETD******
*DVPLPL***************VLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEA*********NYIFPPCSASVELSCMSVSLCLIYLIFHKYSCIYET*******
MDVPLPLEKLSLESKTQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTGKKQNYIFPPCSASVELSCMSVSLCLIYLIFHKYSCIYETDKHITSY
*DVPLPLEKLSLESKTQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAG***********FPPCSASVELSCMSVSLCLIYLIFHKYSCIYETDKHIT**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDVPLPLEKLSLESKTQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTGKKQNYIFPPCSASVELSCMSVSLCLIYLIFHKYSCIYETDKHITSY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query173 2.2.26 [Sep-21-2011]
A4IH61 307 Nicotinamide mononucleoti no no 0.578 0.325 0.514 4e-25
P53204395 Nicotinamide-nucleotide a yes no 0.722 0.316 0.445 3e-24
Q9BZQ4 307 Nicotinamide mononucleoti yes no 0.578 0.325 0.504 6e-24
Q8BNJ3 307 Nicotinamide mononucleoti yes no 0.578 0.325 0.504 6e-24
Q5RBL5 307 Nicotinamide mononucleoti yes no 0.578 0.325 0.504 6e-24
Q0HA29 307 Nicotinamide mononucleoti yes no 0.578 0.325 0.504 6e-24
Q0VC59 307 Nicotinamide mononucleoti yes no 0.578 0.325 0.504 7e-24
Q9HAN9 279 Nicotinamide mononucleoti no no 0.537 0.333 0.563 2e-23
Q0VD50 281 Nicotinamide mononucleoti no no 0.537 0.330 0.574 3e-23
Q96T66252 Nicotinamide mononucleoti no no 0.578 0.396 0.504 5e-23
>sp|A4IH61|NMNA2_XENTR Nicotinamide mononucleotide adenylyltransferase 2 OS=Xenopus tropicalis GN=nmnat2 PE=2 SV=1 Back     alignment and function desciption
 Score =  114 bits (284), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 75/101 (74%), Gaps = 1/101 (0%)

Query: 19  KTYVVLVATGSFNPPTFMHLRMFELARDTLNSEG-YCVIGGYMSPVNDAYKKRGLISAEH 77
           KT+V+L+A GSFNP T  H++MFE ARD L+  G + VIGG +SPV+D+Y K+GL+S+ H
Sbjct: 6   KTHVILLACGSFNPITKGHIQMFERARDYLHKTGKFIVIGGIISPVHDSYGKQGLVSSRH 65

Query: 78  RINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFL 118
           R+N+C LA ++SD+I VDPWE  Q  +Q T +VL   ++ +
Sbjct: 66  RLNMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLM 106
Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate.
Xenopus tropicalis (taxid: 8364)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 1EC: 8
>sp|P53204|NMA2_YEAST Nicotinamide-nucleotide adenylyltransferase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NMA2 PE=1 SV=1 Back     alignment and function description
>sp|Q9BZQ4|NMNA2_HUMAN Nicotinamide mononucleotide adenylyltransferase 2 OS=Homo sapiens GN=NMNAT2 PE=1 SV=1 Back     alignment and function description
>sp|Q8BNJ3|NMNA2_MOUSE Nicotinamide mononucleotide adenylyltransferase 2 OS=Mus musculus GN=Nmnat2 PE=2 SV=1 Back     alignment and function description
>sp|Q5RBL5|NMNA2_PONAB Nicotinamide mononucleotide adenylyltransferase 2 OS=Pongo abelii GN=NMNAT2 PE=2 SV=1 Back     alignment and function description
>sp|Q0HA29|NMNA2_RAT Nicotinamide mononucleotide adenylyltransferase 2 OS=Rattus norvegicus GN=Nmnat2 PE=2 SV=1 Back     alignment and function description
>sp|Q0VC59|NMNA2_BOVIN Nicotinamide mononucleotide adenylyltransferase 2 OS=Bos taurus GN=NMNAT2 PE=2 SV=1 Back     alignment and function description
>sp|Q9HAN9|NMNA1_HUMAN Nicotinamide mononucleotide adenylyltransferase 1 OS=Homo sapiens GN=NMNAT1 PE=1 SV=1 Back     alignment and function description
>sp|Q0VD50|NMNA1_BOVIN Nicotinamide mononucleotide adenylyltransferase 1 OS=Bos taurus GN=NMNAT1 PE=2 SV=1 Back     alignment and function description
>sp|Q96T66|NMNA3_HUMAN Nicotinamide mononucleotide adenylyltransferase 3 OS=Homo sapiens GN=NMNAT3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query173
359494376254 PREDICTED: nicotinamide mononucleotide a 0.716 0.488 0.774 1e-52
296089926249 unnamed protein product [Vitis vinifera] 0.716 0.497 0.774 2e-52
356552585245 PREDICTED: nicotinamide mononucleotide a 0.722 0.510 0.746 2e-52
356563422245 PREDICTED: nicotinamide mononucleotide a 0.722 0.510 0.738 3e-52
357495089251 Nicotinamide mononucleotide adenylyltran 0.722 0.498 0.731 7e-52
388514509197 unknown [Medicago truncatula] 0.722 0.634 0.731 5e-51
297796461238 hypothetical protein ARALYDRAFT_495663 [ 0.682 0.495 0.796 3e-50
42568561238 nicotinamide mononucleotide adenylyltran 0.682 0.495 0.788 3e-50
357455741236 Nicotinamide mononucleotide adenylyltran 0.624 0.457 0.814 1e-46
115449565 315 Os02g0814900 [Oryza sativa Japonica Grou 0.734 0.403 0.643 1e-43
>gi|359494376|ref|XP_002268571.2| PREDICTED: nicotinamide mononucleotide adenylyltransferase 1-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  210 bits (535), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 103/133 (77%), Positives = 110/133 (82%), Gaps = 9/133 (6%)

Query: 1   MDVPLPLEKLSLES---------KTQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSE 51
           MD+PLPLEKLSLES           + K YV LVATGSFNPPT MHLRMFELARD L SE
Sbjct: 6   MDIPLPLEKLSLESIDEDRSLETTNREKMYVALVATGSFNPPTNMHLRMFELARDALRSE 65

Query: 52  GYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVL 111
           GYCVIGGYMSPVNDAYKKRGLISAEHRI +C+LACKSS+FIMVDPWEANQS +QRTLTVL
Sbjct: 66  GYCVIGGYMSPVNDAYKKRGLISAEHRIQMCDLACKSSEFIMVDPWEANQSTFQRTLTVL 125

Query: 112 SRVKNFLIEAGLI 124
           SR+K  L E GLI
Sbjct: 126 SRIKCSLCENGLI 138

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296089926|emb|CBI39745.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356552585|ref|XP_003544646.1| PREDICTED: nicotinamide mononucleotide adenylyltransferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356563422|ref|XP_003549962.1| PREDICTED: nicotinamide mononucleotide adenylyltransferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357495089|ref|XP_003617833.1| Nicotinamide mononucleotide adenylyltransferase [Medicago truncatula] gi|355519168|gb|AET00792.1| Nicotinamide mononucleotide adenylyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388514509|gb|AFK45316.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|297796461|ref|XP_002866115.1| hypothetical protein ARALYDRAFT_495663 [Arabidopsis lyrata subsp. lyrata] gi|297311950|gb|EFH42374.1| hypothetical protein ARALYDRAFT_495663 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42568561|ref|NP_200392.3| nicotinamide mononucleotide adenylyltransferase [Arabidopsis thaliana] gi|332009299|gb|AED96682.1| nicotinamide mononucleotide adenylyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357455741|ref|XP_003598151.1| Nicotinamide mononucleotide adenylyltransferase [Medicago truncatula] gi|355487199|gb|AES68402.1| Nicotinamide mononucleotide adenylyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|115449565|ref|NP_001048497.1| Os02g0814900 [Oryza sativa Japonica Group] gi|113538028|dbj|BAF10411.1| Os02g0814900 [Oryza sativa Japonica Group] gi|125584131|gb|EAZ25062.1| hypothetical protein OsJ_08854 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query173
SGD|S000003242395 NMA2 "Nicotinic acid mononucle 0.739 0.324 0.443 1.2e-24
UNIPROTKB|E1C0M1252 E1C0M1 "Uncharacterized protei 0.537 0.369 0.585 1.4e-23
UNIPROTKB|F1NH63229 F1NH63 "Uncharacterized protei 0.537 0.406 0.585 1.4e-23
UNIPROTKB|D4AAS6 285 Nmnat1 "Protein Nmnat1" [Rattu 0.537 0.326 0.606 3.8e-23
UNIPROTKB|Q0VC59 307 NMNAT2 "Nicotinamide mononucle 0.578 0.325 0.504 4.8e-23
UNIPROTKB|J9NZG3 307 NMNAT2 "Uncharacterized protei 0.578 0.325 0.504 4.8e-23
UNIPROTKB|J9P463 307 NMNAT2 "Uncharacterized protei 0.578 0.325 0.504 4.8e-23
UNIPROTKB|Q9BZQ4 307 NMNAT2 "Nicotinamide mononucle 0.578 0.325 0.504 4.8e-23
MGI|MGI:2444155 307 Nmnat2 "nicotinamide nucleotid 0.578 0.325 0.504 4.8e-23
RGD|1307331 307 Nmnat2 "nicotinamide nucleotid 0.578 0.325 0.504 4.8e-23
SGD|S000003242 NMA2 "Nicotinic acid mononucleotide adenylyltransferase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 59/133 (44%), Positives = 88/133 (66%)

Query:     2 DVPLPLEKLSLESKTQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEG-YCVIGGYM 60
             D   P+ +L+ + +   K  +++VA GSF+P T++HLRMFE+A D +N +  + V+GGY 
Sbjct:   140 DYEFPVHRLTKKLQDPEKLPLIIVACGSFSPITYLHLRMFEMALDDINEQTRFEVVGGYF 199

Query:    61 SPVNDAYKKRGLISAEHRINLCNLAC-KSSDFIMVDPWEANQSGYQRTLTVLSRVKNFL- 118
             SPV+D Y+KRGL  A HR+ +C LAC ++S ++MVD WE+ QS Y RT  VL    + + 
Sbjct:   200 SPVSDNYQKRGLAPAYHRVRMCELACERTSSWLMVDAWESLQSSYTRTAKVLDHFNHEIN 259

Query:   119 IEAGLIST--GKK 129
             I+ G I T  G+K
Sbjct:   260 IKRGGIMTVDGEK 272
GO:0005634 "nucleus" evidence=IEA;IDA
GO:0005524 "ATP binding" evidence=IEA
GO:0009435 "NAD biosynthetic process" evidence=IEA;ISA;IDA
GO:0003824 "catalytic activity" evidence=IEA
GO:0009058 "biosynthetic process" evidence=IEA
GO:0016779 "nucleotidyltransferase activity" evidence=IEA
GO:0000309 "nicotinamide-nucleotide adenylyltransferase activity" evidence=IEA;ISA;IDA
GO:0019363 "pyridine nucleotide biosynthetic process" evidence=IEA
GO:0000166 "nucleotide binding" evidence=IEA
GO:0016740 "transferase activity" evidence=IEA
UNIPROTKB|E1C0M1 E1C0M1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NH63 F1NH63 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|D4AAS6 Nmnat1 "Protein Nmnat1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VC59 NMNAT2 "Nicotinamide mononucleotide adenylyltransferase 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J9NZG3 NMNAT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9P463 NMNAT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BZQ4 NMNAT2 "Nicotinamide mononucleotide adenylyltransferase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2444155 Nmnat2 "nicotinamide nucleotide adenylyltransferase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1307331 Nmnat2 "nicotinamide nucleotide adenylyltransferase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.70.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh2_kg.8__1479__AT5G55810.1
annotation not avaliable (238 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
fgenesh2_kg.1__4517__AT1G55090.1
annotation not avaliable (725 aa)
     •• 0.729
fgenesh2_kg.6__2041__AT5G20070.1
annotation not avaliable (438 aa)
     •• 0.678
fgenesh2_kg.5__44__AT2G01350.1
annotation not avaliable (348 aa)
     •• 0.572
Al_scaffold_0007_328
annotation not avaliable (535 aa)
•    •• 0.520
fgenesh1_pg.C_scaffold_3002016
annotation not avaliable (504 aa)
     •• 0.511
fgenesh2_kg.4__272__AT2G23420.1
annotation not avaliable (563 aa)
•    •• 0.496
fgenesh2_kg.7__2831__AT4G14930.1
annotation not avaliable (316 aa)
     •  0.411
fgenesh2_kg.1__2871__AT1G24290.1
annotation not avaliable (525 aa)
    •   0.411

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query173
PLN02945236 PLN02945, PLN02945, nicotinamide-nucleotide adenyl 2e-82
cd09286225 cd09286, NMNAT_Eukarya, Nicotinamide/nicotinate mo 7e-53
TIGR00482193 TIGR00482, TIGR00482, nicotinate (nicotinamide) nu 6e-20
COG1057197 COG1057, NadD, Nicotinic acid mononucleotide adeny 2e-15
pfam01467148 pfam01467, CTP_transf_2, Cytidylyltransferase 2e-15
cd02165192 cd02165, NMNAT, Nicotinamide/nicotinate mononucleo 2e-10
cd02039143 cd02039, cytidylyltransferase_like, Cytidylyltrans 4e-06
PRK00071203 PRK00071, nadD, nicotinic acid mononucleotide aden 1e-05
>gnl|CDD|178531 PLN02945, PLN02945, nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase Back     alignment and domain information 
 Score =  243 bits (621), Expect = 2e-82
 Identities = 94/129 (72%), Positives = 103/129 (79%), Gaps = 1/129 (0%)

Query: 1   MDVPLPLEKLSLES-KTQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGY 59
           MDVPLP EKLS  +  T  +T VVLVATGSFNPPT+MHLRMFELARD L SEGY V+GGY
Sbjct: 1   MDVPLPTEKLSCGANSTGPRTRVVLVATGSFNPPTYMHLRMFELARDALMSEGYHVLGGY 60

Query: 60  MSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLI 119
           MSPVNDAYKK+GL SAEHRI +C LAC+ SDFIMVDPWEA QS YQRTLTVL+RV+  L 
Sbjct: 61  MSPVNDAYKKKGLASAEHRIQMCQLACEDSDFIMVDPWEARQSTYQRTLTVLARVETSLN 120

Query: 120 EAGLISTGK 128
             GL S   
Sbjct: 121 NNGLASEES 129

Length = 236
>gnl|CDD|185681 cd09286, NMNAT_Eukarya, Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic Back     alignment and domain information
>gnl|CDD|232994 TIGR00482, TIGR00482, nicotinate (nicotinamide) nucleotide adenylyltransferase Back     alignment and domain information
>gnl|CDD|223985 COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|216517 pfam01467, CTP_transf_2, Cytidylyltransferase Back     alignment and domain information
>gnl|CDD|185680 cd02165, NMNAT, Nicotinamide/nicotinate mononucleotide adenylyltransferase Back     alignment and domain information
>gnl|CDD|185678 cd02039, cytidylyltransferase_like, Cytidylyltransferase-like domain Back     alignment and domain information
>gnl|CDD|234611 PRK00071, nadD, nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 173
PLN02945236 nicotinamide-nucleotide adenylyltransferase/nicoti 100.0
COG1057197 NadD Nicotinic acid mononucleotide adenylyltransfe 100.0
PRK06973243 nicotinic acid mononucleotide adenylyltransferase; 100.0
TIGR00482193 nicotinate (nicotinamide) nucleotide adenylyltrans 100.0
PRK00071203 nadD nicotinic acid mononucleotide adenylyltransfe 100.0
PRK08887174 nicotinic acid mononucleotide adenylyltransferase; 100.0
PRK07152 342 nadD putative nicotinate-nucleotide adenylyltransf 100.0
cd02165192 NMNAT Nicotinamide/nicotinate mononucleotide adeny 100.0
cd09286225 NMNAT_Eukarya Nicotinamide/nicotinate mononucleoti 99.98
TIGR01510155 coaD_prev_kdtB pantetheine-phosphate adenylyltrans 99.93
PF01467157 CTP_transf_2: Cytidylyltransferase; InterPro: IPR0 99.91
cd02163153 PPAT Phosphopantetheine adenylyltransferase. Phosp 99.91
PRK00168159 coaD phosphopantetheine adenylyltransferase; Provi 99.89
KOG3199234 consensus Nicotinamide mononucleotide adenylyl tra 99.85
cd02039143 cytidylyltransferase_like Cytidylyltransferase-lik 99.79
cd02167158 NMNAT_NadR Nicotinamide/nicotinate mononucleotide 99.77
PRK13964140 coaD phosphopantetheine adenylyltransferase; Provi 99.73
TIGR01526 325 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltr 99.68
cd02166163 NMNAT_Archaea Nicotinamide/nicotinate mononucleoti 99.68
TIGR01527165 arch_NMN_Atrans nicotinamide-nucleotide adenylyltr 99.66
COG0669159 CoaD Phosphopantetheine adenylyltransferase [Coenz 99.64
cd02168181 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide 99.63
PRK01153174 nicotinamide-nucleotide adenylyltransferase; Provi 99.62
PRK05379 340 bifunctional nicotinamide mononucleotide adenylylt 99.58
TIGR0012566 cyt_tran_rel cytidyltransferase-related domain. Pr 99.58
cd02170136 cytidylyltransferase cytidylyltransferase. The cyt 99.5
PRK08099 399 bifunctional DNA-binding transcriptional repressor 99.49
cd02169297 Citrate_lyase_ligase Citrate lyase ligase. Citrate 99.45
cd02164143 PPAT_CoAS phosphopantetheine adenylyltransferase d 99.44
PRK00777153 phosphopantetheine adenylyltransferase; Provisiona 99.4
TIGR00124332 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP 99.39
smart00764182 Citrate_ly_lig Citrate lyase ligase C-terminal dom 99.35
cd02156105 nt_trans nucleotidyl transferase superfamily. nt_t 99.31
TIGR00339383 sopT ATP sulphurylase. Members of this family also 99.29
cd02171129 G3P_Cytidylyltransferase glycerol-3-phosphate cyti 99.28
cd02174150 CCT CTP:phosphocholine cytidylyltransferase. CTP:p 99.17
PRK13671 298 hypothetical protein; Provisional 99.14
PRK13793196 nicotinamide-nucleotide adenylyltransferase; Provi 99.14
cd02173152 ECT CTP:phosphoethanolamine cytidylyltransferase ( 99.09
PLN02406 418 ethanolamine-phosphate cytidylyltransferase 99.05
PTZ00308353 ethanolamine-phosphate cytidylyltransferase; Provi 98.94
COG1056172 NadR Nicotinamide mononucleotide adenylyltransfera 98.87
cd02064180 FAD_synthetase_N FAD synthetase, N-terminal domain 98.84
TIGR01518125 g3p_cytidyltrns glycerol-3-phosphate cytidylyltran 98.51
PLN02388177 phosphopantetheine adenylyltransferase 98.45
cd02172144 RfaE_N N-terminal domain of RfaE. RfaE is a protei 98.44
COG0615140 TagD Cytidylyltransferase [Cell envelope biogenesi 98.33
COG1019158 Predicted nucleotidyltransferase [General function 98.33
TIGR02199144 rfaE_dom_II rfaE bifunctional protein, domain II. 98.3
PRK01170 322 phosphopantetheine adenylyltransferase/unknown dom 98.25
PTZ00308 353 ethanolamine-phosphate cytidylyltransferase; Provi 98.16
PF08218182 Citrate_ly_lig: Citrate lyase ligase C-terminal do 97.95
PLN02413 294 choline-phosphate cytidylyltransferase 97.93
PRK11316473 bifunctional heptose 7-phosphate kinase/heptose 1- 97.57
KOG3351293 consensus Predicted nucleotidyltransferase [Genera 97.21
PRK05627 305 bifunctional riboflavin kinase/FMN adenylyltransfe 97.05
PRK07143 279 hypothetical protein; Provisional 97.03
PRK13670 388 hypothetical protein; Provisional 96.98
PLN02406418 ethanolamine-phosphate cytidylyltransferase 96.96
PF05636 388 HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPr 96.83
PF06574157 FAD_syn: FAD synthetase; InterPro: IPR015864 Ribof 96.73
COG3053352 CitC Citrate lyase synthetase [Energy production a 96.64
TIGR00083 288 ribF riboflavin kinase/FMN adenylyltransferase. mu 96.32
COG2046397 MET3 ATP sulfurylase (sulfate adenylyltransferase) 96.15
PF01747215 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002 96.01
cd00517353 ATPS ATP-sulfurylase. ATP-sulfurylase (ATPS), also 95.52
COG1323 358 Predicted nucleotidyltransferase [General function 95.37
KOG2803 358 consensus Choline phosphate cytidylyltransferase/P 94.8
PRK04149391 sat sulfate adenylyltransferase; Reviewed 94.22
PRK05537 568 bifunctional sulfate adenylyltransferase subunit 1 93.23
COG0196 304 RibF FAD synthase [Coenzyme metabolism] 93.06
KOG2804 348 consensus Phosphorylcholine transferase/cholinepho 92.84
KOG2803358 consensus Choline phosphate cytidylyltransferase/P 88.97
COG2870467 RfaE ADP-heptose synthase, bifunctional sugar kina 88.21
PLN02660 284 pantoate--beta-alanine ligase 87.82
cd00560 277 PanC Pantoate-beta-alanine ligase. PanC Pantoate-b 85.85
PRK00380 281 panC pantoate--beta-alanine ligase; Reviewed 83.04
TIGR00018 282 panC pantoate--beta-alanine ligase. This family is 81.82
>PLN02945 nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase Back     alignment and domain information 
Probab=100.00  E-value=1.9e-39  Score=270.02  Aligned_cols=147  Identities=64%  Similarity=0.911  Sum_probs=137.4

Q ss_pred             CCCCCChhhhhcccc-cCCcceEEEEecCcCChhhHHHHHHHHHHHHhhCCCcEEEEecccCCCCcccccCCCCCHHHHH
Q 030661            1 MDVPLPLEKLSLESK-TQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRI   79 (173)
Q Consensus         1 ~~~~~p~~~~~~~~~-~~~~~~ii~lfGGSFdP~H~GHl~ia~~a~~~l~ld~v~vvp~~~~P~k~~~~K~~~~s~~~Rl   79 (173)
                      ||+|+|+++|+..++ .+++..++++|||||||||+||+.+|+.|.+.+++|++++||++.+|.++++.|+..+++++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~v~i~GGSFdP~H~gHl~ia~~a~~~l~~d~~~~v~~~~~P~~~~~~k~~~~~~~~Rl   80 (236)
T PLN02945          1 MDVPLPTEKLSCGANSTGPRTRVVLVATGSFNPPTYMHLRMFELARDALMSEGYHVLGGYMSPVNDAYKKKGLASAEHRI   80 (236)
T ss_pred             CCCCchHHHHhhhhcCccCCceEEEEEcCCCCCCcHHHHHHHHHHHHHHhhcCcEEEEEEECCCCcccccCCCCCHHHHH
Confidence            899999999999996 6788899999999999999999999999999999999999999999998888888889999999


Q ss_pred             HHHHHHhcCCCCeEEeeccccCCcccchHHHHHHHHHHc--------C---------CcccCCccc---hH----HHhcC
Q 030661           80 NLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFL--------I---------EAGLISTGK---KQ----NYIFP  135 (173)
Q Consensus        80 ~Ml~lai~~~~~i~v~~~E~~~~~~syT~~TL~~lk~~~--------p---------~D~l~~l~~---W~----e~L~~  135 (173)
                      +|+++|+++++++.|++||+++++++||++||++++++|        |         +|++.+|++   |+    ++|++
T Consensus        81 ~Ml~lai~~~~~~~V~~~E~~~~~~syT~dtL~~l~~~~~~~~~~~~~~~~~~fiiG~D~l~~l~~~~~W~~~~~~~l~~  160 (236)
T PLN02945         81 QMCQLACEDSDFIMVDPWEARQSTYQRTLTVLARVETSLNNNGLASEESVRVMLLCGSDLLESFSTPGVWIPDQVRTICR  160 (236)
T ss_pred             HHHHHHhcCCCCeEecHHHhCCCCCccHHHHHHHHHHHhccccccCCCCceEEEEechhHHHhcCCCCcCCHHHHHHHHH
Confidence            999999999999999999999999999999999999987        3         799999997   87    45999


Q ss_pred             CccEEEEecCCc
Q 030661          136 PCSASVELSCMS  147 (173)
Q Consensus       136 ~~~~vV~~r~~~  147 (173)
                      .|+|+|+.|.-.
T Consensus       161 ~~~~vV~~R~g~  172 (236)
T PLN02945        161 DYGVVCIRREGQ  172 (236)
T ss_pred             hCCEEEEeCCCC
Confidence            999999999753

>COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>PRK06973 nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>TIGR00482 nicotinate (nicotinamide) nucleotide adenylyltransferase Back     alignment and domain information
>PRK00071 nadD nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PRK08887 nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated Back     alignment and domain information
>cd02165 NMNAT Nicotinamide/nicotinate mononucleotide adenylyltransferase Back     alignment and domain information
>cd09286 NMNAT_Eukarya Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic Back     alignment and domain information
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase, bacterial Back     alignment and domain information
>PF01467 CTP_transf_2: Cytidylyltransferase; InterPro: IPR004820 This family includes []: Cholinephosphate cytidyltransferase (P49585 from SWISSPROT) Back     alignment and domain information
>cd02163 PPAT Phosphopantetheine adenylyltransferase Back     alignment and domain information
>PRK00168 coaD phosphopantetheine adenylyltransferase; Provisional Back     alignment and domain information
>KOG3199 consensus Nicotinamide mononucleotide adenylyl transferase [Coenzyme transport and metabolism] Back     alignment and domain information
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain Back     alignment and domain information
>cd02167 NMNAT_NadR Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional NadR-like proteins Back     alignment and domain information
>PRK13964 coaD phosphopantetheine adenylyltransferase; Provisional Back     alignment and domain information
>TIGR01526 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltransferase, NadR type Back     alignment and domain information
>cd02166 NMNAT_Archaea Nicotinamide/nicotinate mononucleotide adenylyltransferase, archaeal Back     alignment and domain information
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase Back     alignment and domain information
>COG0669 CoaD Phosphopantetheine adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>cd02168 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional proteins, also containing a Nudix hydrolase domain Back     alignment and domain information
>PRK01153 nicotinamide-nucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PRK05379 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; Provisional Back     alignment and domain information
>TIGR00125 cyt_tran_rel cytidyltransferase-related domain Back     alignment and domain information
>cd02170 cytidylyltransferase cytidylyltransferase Back     alignment and domain information
>PRK08099 bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase; Provisional Back     alignment and domain information
>cd02169 Citrate_lyase_ligase Citrate lyase ligase Back     alignment and domain information
>cd02164 PPAT_CoAS phosphopantetheine adenylyltransferase domain of eukaryotic and archaeal bifunctional enzymes Back     alignment and domain information
>PRK00777 phosphopantetheine adenylyltransferase; Provisional Back     alignment and domain information
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase Back     alignment and domain information
>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain Back     alignment and domain information
>cd02156 nt_trans nucleotidyl transferase superfamily Back     alignment and domain information
>TIGR00339 sopT ATP sulphurylase Back     alignment and domain information
>cd02171 G3P_Cytidylyltransferase glycerol-3-phosphate cytidylyltransferase Back     alignment and domain information
>cd02174 CCT CTP:phosphocholine cytidylyltransferase Back     alignment and domain information
>PRK13671 hypothetical protein; Provisional Back     alignment and domain information
>PRK13793 nicotinamide-nucleotide adenylyltransferase; Provisional Back     alignment and domain information
>cd02173 ECT CTP:phosphoethanolamine cytidylyltransferase (ECT) Back     alignment and domain information
>PLN02406 ethanolamine-phosphate cytidylyltransferase Back     alignment and domain information
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional Back     alignment and domain information
>COG1056 NadR Nicotinamide mononucleotide adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme Back     alignment and domain information
>TIGR01518 g3p_cytidyltrns glycerol-3-phosphate cytidylyltransferase Back     alignment and domain information
>PLN02388 phosphopantetheine adenylyltransferase Back     alignment and domain information
>cd02172 RfaE_N N-terminal domain of RfaE Back     alignment and domain information
>COG0615 TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism] Back     alignment and domain information
>COG1019 Predicted nucleotidyltransferase [General function prediction only] Back     alignment and domain information
>TIGR02199 rfaE_dom_II rfaE bifunctional protein, domain II Back     alignment and domain information
>PRK01170 phosphopantetheine adenylyltransferase/unknown domain fusion protein; Provisional Back     alignment and domain information
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional Back     alignment and domain information
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6 Back     alignment and domain information
>PLN02413 choline-phosphate cytidylyltransferase Back     alignment and domain information
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional Back     alignment and domain information
>KOG3351 consensus Predicted nucleotidyltransferase [General function prediction only] Back     alignment and domain information
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed Back     alignment and domain information
>PRK07143 hypothetical protein; Provisional Back     alignment and domain information
>PRK13670 hypothetical protein; Provisional Back     alignment and domain information
>PLN02406 ethanolamine-phosphate cytidylyltransferase Back     alignment and domain information
>PF05636 HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPro: IPR008513 This family consists of several bacterial proteins of unknown function Back     alignment and domain information
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2 Back     alignment and domain information
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion] Back     alignment and domain information
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase Back     alignment and domain information
>COG2046 MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01747 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002650 This entry consists of sulphate adenylyltransferase or ATP-sulfurylase (2 Back     alignment and domain information
>cd00517 ATPS ATP-sulfurylase Back     alignment and domain information
>COG1323 Predicted nucleotidyltransferase [General function prediction only] Back     alignment and domain information
>KOG2803 consensus Choline phosphate cytidylyltransferase/Predicted CDP-ethanolamine synthase [Lipid transport and metabolism] Back     alignment and domain information
>PRK04149 sat sulfate adenylyltransferase; Reviewed Back     alignment and domain information
>PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated Back     alignment and domain information
>COG0196 RibF FAD synthase [Coenzyme metabolism] Back     alignment and domain information
>KOG2804 consensus Phosphorylcholine transferase/cholinephosphate cytidylyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG2803 consensus Choline phosphate cytidylyltransferase/Predicted CDP-ethanolamine synthase [Lipid transport and metabolism] Back     alignment and domain information
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PLN02660 pantoate--beta-alanine ligase Back     alignment and domain information
>cd00560 PanC Pantoate-beta-alanine ligase Back     alignment and domain information
>PRK00380 panC pantoate--beta-alanine ligase; Reviewed Back     alignment and domain information
>TIGR00018 panC pantoate--beta-alanine ligase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query173
1kqn_A 279 Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE CO 1e-24
1kku_A 279 Crystal Structure Of Nuclear Human Nicotinamide Mon 1e-24
1nup_A252 Crystal Structure Of Human Cytosolic NmnNAMN ADENYL 4e-24
1gzu_A 290 Crystal Structure Of Human Nicotinamide Mononucleot 3e-23
3f3m_A168 Six Crystal Structures Of Two Phosphopantetheine Ad 3e-04
>pdb|1KQN|A Chain A, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED With Nad Length = 279 Back     alignment and structure 
Iteration: 1

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 19  KTYVVLVATGSFNPPTFMHLRMFELARDTLNSEG-YCVIGGYMSPVNDAYKKRGLISAEH 77
           KT VVL+A GSFNP T MHLR+FELA+D +N  G Y V+ G +SPV DAYKK+GLI A H
Sbjct: 6   KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYH 65
Query: 78  RINLCNLACKSSDFIMVDPWEANQSGYQRTLTVL 111
           R+ +  LA K+S ++ VD WE+ Q  ++ TL VL
Sbjct: 66  RVIMAELATKNSKWVEVDTWESLQKEWKETLKVL 99
>pdb|1KKU|A Chain A, Crystal Structure Of Nuclear Human Nicotinamide Mononucleotide Adenylyltransferase Length = 279 Back     alignment and structure
>pdb|1NUP|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN ADENYLYLTRANSFERASE Complex With Nmn Length = 252 Back     alignment and structure
>pdb|1GZU|A Chain A, Crystal Structure Of Human Nicotinamide Mononucleotide Adenylyltransferase In Complex With Nmn Length = 290 Back     alignment and structure
>pdb|3F3M|A Chain A, Six Crystal Structures Of Two Phosphopantetheine Adenylyltransferases Reveal An Alternative Ligand Binding Mode And An Associated Structural Change Length = 168 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query173
1nup_A252 FKSG76; NAD biosynthesis, mitochondria, pyridine a 7e-40
1kqn_A 279 Nmnat, nicotinamide mononucleotide adenylyl transf 9e-35
1k4m_A213 NAMN adenylyltransferase; nucleotidyltransferase; 5e-07
1yum_A242 'probable nicotinate-nucleotide adenylyltransferas 7e-07
2h29_A189 Probable nicotinate-nucleotide adenylyltransferase 3e-06
1kam_A194 Deamido-NAD(+), nicotinate-nucleotide adenylyltran 6e-06
3h05_A177 Uncharacterized protein VPA0413; nucleotidylyl, tr 2e-05
2qtr_A189 Nicotinate (nicotinamide) nucleotide adenylyltran; 2e-05
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A* Length = 252 Back     alignment and structure
 Score =  134 bits (339), Expect = 7e-40
 Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 2/141 (1%)

Query: 17  QGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEG-YCVIGGYMSPVNDAYKKRGLISA 75
           + +  VVL+A GSFNP T MHLRMFE+ARD L+  G Y VI G +SPVND Y K+ L ++
Sbjct: 2   KSRIPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAAS 61

Query: 76  EHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEA-GLISTGKKQNYIF 134
            HR+ +  LA ++SD+I VDPWE+ Q+ +  T+ VL    + L+ +   +        +F
Sbjct: 62  HHRVAMARLALQTSDWIRVDPWESEQAQWMETVKVLRHHHSKLLRSPPQMEGPDHGKALF 121

Query: 135 PPCSASVELSCMSVSLCLIYL 155
              +A  EL  +  +  L   
Sbjct: 122 STPAAVPELKLLCGADVLKTF 142
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A* Length = 279 Back     alignment and structure
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A* Length = 213 Back     alignment and structure
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A* Length = 242 Back     alignment and structure
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A* Length = 189 Back     alignment and structure
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A* Length = 194 Back     alignment and structure
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus} Length = 177 Back     alignment and structure
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A* Length = 189 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query173
3h05_A177 Uncharacterized protein VPA0413; nucleotidylyl, tr 100.0
1yum_A242 'probable nicotinate-nucleotide adenylyltransferas 99.98
2h29_A189 Probable nicotinate-nucleotide adenylyltransferase 99.97
1kam_A194 Deamido-NAD(+), nicotinate-nucleotide adenylyltran 99.97
1k4m_A213 NAMN adenylyltransferase; nucleotidyltransferase; 99.97
1nup_A252 FKSG76; NAD biosynthesis, mitochondria, pyridine a 99.96
2qtr_A189 Nicotinate (nicotinamide) nucleotide adenylyltran; 99.96
1kqn_A279 Nmnat, nicotinamide mononucleotide adenylyl transf 99.96
3f3m_A168 Phosphopantetheine adenylyltransferase; PPAT, coen 99.9
1vlh_A173 Phosphopantetheine adenylyltransferase; TM0741, st 99.89
3nbk_A177 Phosphopantetheine adenylyltransferase; PPAT, PHP; 99.87
3nd5_A171 Phosphopantetheine adenylyltransferase; PPAT, coen 99.86
1qjc_A158 Phosphopantetheine adenylyltransferase; coenzyme A 99.84
1o6b_A169 Phosphopantetheine adenylyltransferase; structural 99.83
1od6_A160 PPAT, phosphopantetheine adenylyltransferase; coen 99.83
4f3r_A162 Phosphopantetheine adenylyltransferase; phosphopan 99.82
3k9w_A187 Phosphopantetheine adenylyltransferase; niaid, ssg 99.81
1f9a_A168 Hypothetical protein MJ0541; alpha/beta, transfera 99.76
3nv7_A157 Phosphopantetheine adenylyltransferase; helicobact 99.75
1ej2_A181 Nicotinamide mononucleotide adenylyltransferase; d 99.71
1coz_A129 Protein (glycerol-3-phosphate cytidylyltransferase 99.71
2b7l_A132 Glycerol-3-phosphate cytidylyltransferase; rossman 99.71
3do8_A148 Phosphopantetheine adenylyltransferase; protein wi 99.7
2qjt_B 352 Nicotinamide-nucleotide adenylyltransferase; two i 99.69
1lw7_A 365 Transcriptional regulator NADR; NMN, NMN adenylyl 99.68
1jhd_A396 Sulfate adenylyltransferase; sulfurylase, APS, che 99.68
2qjo_A 341 Bifunctional NMN adenylyltransferase/nudix hydrol; 99.65
1v47_A349 ATP sulfurylase; product binding complex, zinc, ri 99.63
3hl4_A236 Choline-phosphate cytidylyltransferase A; rossmann 99.29
3glv_A143 Lipopolysaccharide core biosynthesis protein; stru 99.1
3elb_A341 Ethanolamine-phosphate cytidylyltransferase; kenne 99.04
3elb_A 341 Ethanolamine-phosphate cytidylyltransferase; kenne 99.04
2x0k_A 338 Riboflavin biosynthesis protein RIBF; riboflavin k 98.25
1r6x_A395 ATP:sulfate adenylyltransferase; APS kinase-like d 97.69
3gmi_A 357 UPF0348 protein MJ0951; protein with unknown funct 97.59
1g8f_A 511 Sulfate adenylyltransferase; alpha-beta protein, b 97.55
1mrz_A 293 Riboflavin kinase/FMN adenylyltransferase; rossman 97.49
3op1_A 308 Macrolide-efflux protein; structural genomics, PSI 97.32
2ejc_A 280 Pantoate--beta-alanine ligase; X-RAY diffraction, 96.48
2gks_A 546 Bifunctional SAT/APS kinase; transferase, sulfuryl 96.19
1m8p_A 573 Sulfate adenylyltransferase; rossmann fold, phosph 96.13
3cr8_A 552 Sulfate adenylyltranferase, adenylylsulfate kinase 93.66
3ag6_A 283 Pantothenate synthetase; ATP-dependent enzyme, ATP 90.02
1v8f_A 276 Pantoate-beta-alanine ligase; rossmann fold, dimer 89.15
1x6v_B630 Bifunctional 3'-phosphoadenosine 5'- phosphosulfat 87.93
3cov_A 301 Pantothenate synthetase; pantothenate biosynthesis 87.65
3inn_A 314 Pantothenate synthetase; ssgcid, SBRI, UW, decode, 87.04
3uk2_A 283 Pantothenate synthetase; AMP, structural genomics, 82.92
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus} Back     alignment and structure
Probab=100.00  E-value=9.2e-36  Score=237.28  Aligned_cols=131  Identities=13%  Similarity=0.115  Sum_probs=108.1

Q ss_pred             cceEEEEecCcCChhhHHHHHHHHHHHHhhCCCcEEEEecccCCCCcccccCCCCCHHHHHHHHHHHhcCCC--CeEEee
Q 030661           19 KTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSD--FIMVDP   96 (173)
Q Consensus        19 ~~~ii~lfGGSFdP~H~GHl~ia~~a~~~l~ld~v~vvp~~~~P~k~~~~K~~~~s~~~Rl~Ml~lai~~~~--~i~v~~   96 (173)
                      |+++ ++|||||||||+||+.+++ |++.+  |+|+|+|+..+|.     |++.+++++|++|+++|+++++  ++.|++
T Consensus         1 M~~i-gi~gGsFdPih~GHl~i~~-a~~~~--d~v~~~p~~~~~~-----k~~~~~~~~R~~m~~~a~~~~~~~~~~v~~   71 (177)
T 3h05_A            1 MKKI-AIFGSAFNPPSLGHKSVIE-SLSHF--DLVLLEPSIAHAW-----GKNMLDYPIRCKLVDAFIKDMGLSNVQRSD   71 (177)
T ss_dssp             CCEE-EEEEECCSSCCHHHHHHHT-TCTTS--SEEEEEECC------------CCCHHHHHHHHHHHHHHHCCTTEEECC
T ss_pred             CcEE-EEEEeccchhhHHHHHHHH-HHHHC--CEEEEEECCCCCC-----CCCCCCHHHHHHHHHHHHhcCCCCcEEEEe
Confidence            3455 4679999999999999998 77766  9999999986654     3568999999999999999874  899999


Q ss_pred             cccc--CCc-ccchHHHHHHHHHHcC---------CcccCCccchH--HHhcCCccEEEEecCCchHHHHHHHHHH
Q 030661           97 WEAN--QSG-YQRTLTVLSRVKNFLI---------EAGLISTGKKQ--NYIFPPCSASVELSCMSVSLCLIYLIFH  158 (173)
Q Consensus        97 ~E~~--~~~-~syT~~TL~~lk~~~p---------~D~l~~l~~W~--e~L~~~~~~vV~~r~~~~~~~~~~~~~~  158 (173)
                      +|.+  +++ +|||++||++|+++||         +|++.+|++|+  ++|+++|+++|+.|...+|.+.|-..+.
T Consensus        72 ~E~~l~~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~l~~~~~~vv~~r~~~iSST~IR~~i~  147 (177)
T 3h05_A           72 LEQALYQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITERWTVMACPEKVKIRSTDIRNALI  147 (177)
T ss_dssp             HHHHHC----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHSEEEECCCSSCCCHHHHHHHHH
T ss_pred             hhhhcccCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcccchhHHHHHHhCCEEEEcCCCCCcHHHHHHHHH
Confidence            9987  666 9999999999999998         79999999999  9999999999999977777777665554
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A* Back     alignment and structure
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A* Back     alignment and structure
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A* Back     alignment and structure
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A* Back     alignment and structure
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A* Back     alignment and structure
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A* Back     alignment and structure
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A* Back     alignment and structure
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0 Back     alignment and structure
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3 Back     alignment and structure
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A* Back     alignment and structure
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A* Back     alignment and structure
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A Back     alignment and structure
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3 Back     alignment and structure
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3 Back     alignment and structure
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii} Back     alignment and structure
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A* Back     alignment and structure
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3 Back     alignment and structure
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A* Back     alignment and structure
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A* Back     alignment and structure
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A* Back     alignment and structure
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus} Back     alignment and structure
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus} Back     alignment and structure
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B Back     alignment and structure
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1 Back     alignment and structure
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP} Back     alignment and structure
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus} Back     alignment and structure
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1} Back     alignment and structure
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens} Back     alignment and structure
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens} Back     alignment and structure
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes} Back     alignment and structure
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii} Back     alignment and structure
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A* Back     alignment and structure
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A Back     alignment and structure
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae} Back     alignment and structure
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima} Back     alignment and structure
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus} Back     alignment and structure
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A* Back     alignment and structure
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans} Back     alignment and structure
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A* Back     alignment and structure
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A Back     alignment and structure
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A* Back     alignment and structure
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ... Back     alignment and structure
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis} Back     alignment and structure
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 173
d1kr2a_ 271 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 2e-28
d1nuua_233 c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransfera 9e-22
d1kama_189 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 4e-07
d1k4ma_213 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 7e-07
d1jhda2223 c.26.1.5 (A:174-396) ATP sulfurylase catalytic dom 8e-06
d1qjca_157 c.26.1.3 (A:) Phosphopantetheine adenylyltransfera 0.004
>d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 271 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 2e-28
 Identities = 55/118 (46%), Positives = 72/118 (61%), Gaps = 1/118 (0%)

Query: 19  KTYVVLVATGSFNPPTFMHLRMFELARDTLNSEG-YCVIGGYMSPVNDAYKKRGLISAEH 77
           KT VVL+A GSFNP T MHLR+FELA+D +N  G Y V+ G +SPV DAYKK+GLI A H
Sbjct: 2   KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYH 61

Query: 78  RINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTGKKQNYIFP 135
           R+ +  LA K+S ++ VD WE+ Q  ++ TL VL   +  L  +             P
Sbjct: 62  RVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERP 119
>d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]} Length = 233 Back     information, alignment and structure
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Length = 189 Back     information, alignment and structure
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]} Length = 213 Back     information, alignment and structure
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]} Length = 223 Back     information, alignment and structure
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]} Length = 157 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query173
d1nuua_233 Cytosolic NMN/NAMN adenylyltransferase {Human (Hom 99.98
d1kr2a_271 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.97
d1k4ma_213 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.94
d1jhda2223 ATP sulfurylase catalytic domain {Sulfur-oxidizing 99.94
d1kama_189 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.92
d1qjca_157 Phosphopantetheine adenylyltransferase {Escherichi 99.75
d1ej2a_167 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.75
d1od6a_160 Phosphopantetheine adenylyltransferase {Thermus th 99.74
d1o6ba_163 Phosphopantetheine adenylyltransferase {Bacillus s 99.73
d1f9aa_164 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.71
d1lw7a1163 Transcriptional regulator NadR, NMN-adenylyltransf 99.59
d1vlha_157 Phosphopantetheine adenylyltransferase {Thermotoga 99.57
d1tfua_157 Phosphopantetheine adenylyltransferase {Mycobacter 99.57
d1coza_126 CTP:glycerol-3-phosphate cytidylyltransferase {Bac 99.29
d1mrza2157 FMN adenylyltransferase domain of bifunctional FAD 97.0
d1g8fa2221 ATP sulfurylase catalytic domain {Baker's yeast (S 96.5
d1v47a2214 ATP sulfurylase catalytic domain {Thermus thermoph 95.72
d1x6va2235 ATP sulfurylase catalytic domain {Human (Homo sapi 94.83
d1v8fa_ 276 Pantothenate synthetase (Pantoate-beta-alanine lig 83.41
>d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Cytosolic NMN/NAMN adenylyltransferase
species: Human (Homo sapiens), FKSG76 [TaxId: 9606]

Probab=99.98  E-value=1.6e-33  Score=227.33  Aligned_cols=127  Identities=41%  Similarity=0.608  Sum_probs=114.4

Q ss_pred             cceEEEEecCcCChhhHHHHHHHHHHHHhhCCCcEE-EEecccCCCCcccccCCCCCHHHHHHHHHHHhcCCCCeEEeec
Q 030661           19 KTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYC-VIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPW   97 (173)
Q Consensus        19 ~~~ii~lfGGSFdP~H~GHl~ia~~a~~~l~ld~v~-vvp~~~~P~k~~~~K~~~~s~~~Rl~Ml~lai~~~~~i~v~~~   97 (173)
                      |.+++++|||||||||+||+.|++.|++++++++++ ++++..+|.++++.++..+++++|++|+++|+++++++.|+++
T Consensus         2 ~~p~vl~~~GSFdP~H~GHl~i~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~R~~M~~la~~~~~~~~v~~~   81 (233)
T d1nuua_           2 RIPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPW   81 (233)
T ss_dssp             CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHSSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCH
T ss_pred             CCCEEEEEeeeeCccHHHHHHHHHHHHHHhCcccceeeeeEEEccCCCCcccCccCCHHHHHHHHHHHHhccCCEEEehH
Confidence            568899999999999999999999999999877754 5556677777766678899999999999999999999999999


Q ss_pred             cccCCcccchHHHHHHHHHHc---------------------C---------CcccCCccchH-------HHhcCCccEE
Q 030661           98 EANQSGYQRTLTVLSRVKNFL---------------------I---------EAGLISTGKKQ-------NYIFPPCSAS  140 (173)
Q Consensus        98 E~~~~~~syT~~TL~~lk~~~---------------------p---------~D~l~~l~~W~-------e~L~~~~~~v  140 (173)
                      |..+++++||++||++|+++|                     |         +|++.+|++|+       ++|++.|+++
T Consensus        82 e~~~~~~s~ti~tl~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fiiG~D~l~~~~~wk~~~~~~~~~il~~~~~i  161 (233)
T d1nuua_          82 ESEQAQWMETVKVLRHHHSKLLRSPPQMEGPDHGKALFSTPAAVPELKLLCGADVLKTFQTPNLWKDAHIQEIVEKFGLV  161 (233)
T ss_dssp             HHHSSSCCCHHHHHHHHHHHHC--------------------CCCEEEEEEEHHHHHHTTSTTTSCHHHHHHHHHHTCEE
T ss_pred             HHhCCCCccHHHHHHHHHHHhcccccccccccccchhccccCCCccEEEEEccchhhhcchhhhhcchhHHHHHhhCcEE
Confidence            999999999999999999986                     2         79999999995       7899999999


Q ss_pred             EEecC
Q 030661          141 VELSC  145 (173)
Q Consensus       141 V~~r~  145 (173)
                      |+.|.
T Consensus       162 v~~R~  166 (233)
T d1nuua_         162 CVGRV  166 (233)
T ss_dssp             EECCT
T ss_pred             EEeCC
Confidence            99996
>d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]} Back     information, alignment and structure
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1coza_ c.26.1.2 (A:) CTP:glycerol-3-phosphate cytidylyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure