Citrus Sinensis ID: 030706

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170---
Protein Sequence
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSDLHSSS
Secondary Structure (PSIPRED)
ccccccccEEEEEEcccccHHHHcccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEEEEccccccEEcccccccccccccccccccHccccHHcccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEEccccccc
Coil and Loop (DISEMBL)
masnaaincsiidfssknhqliftslpiphcrygsstvrfRRNCFSlrasksyhspiiradssssssssssvkrepmlppynvlitgsTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFgeqhvwgtkcdvsegnEVADLVAFAQKNLKYVDIWVFMSDLHSSS
Flexible Loop (DISEMBL)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLrasksyhspiiradssssssssssvkrepmlppyNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSDLHSSS
Low Complexity Region (SEG)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADssssssssssVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSDLHSSS
Disordered region (IsUnstruct)
*****AINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRA******************************PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMS******
Disordered Region (DISOPRED)
******I*CSIIDFSSKNHQLIFTSLPIPHCRYG****R****CFSLRASKSY****************************NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSDLH***
Disordered Region (DISEMBL)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPI******************PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSDLHSSS
Disordered Region (DISPRO)
**SNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSP********************MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSD*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSDLHSSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	173	2.2.26 [Sep-21-2011]
Q8LEU3	348	Chlorophyll(ide) b reduct	yes	no	0.780	0.387	0.608	1e-43
Q84ST4	343	Chlorophyll(ide) b reduct	yes	no	0.606	0.306	0.663	6e-38
Q5N800	504	Probable chlorophyll(ide)	no	no	0.491	0.168	0.43	2e-14
Q93ZA0	496	Probable chlorophyll(ide)	no	no	0.491	0.171	0.42	3e-14
Q9BTZ2	278	Dehydrogenase/reductase S	yes	no	0.595	0.370	0.377	4e-08
Q5RCF8	278	Dehydrogenase/reductase S	yes	no	0.595	0.370	0.377	4e-08
Q13268	258	Dehydrogenase/reductase S	no	no	0.549	0.368	0.350	3e-07
O34782	263	Uncharacterized oxidoredu	yes	no	0.468	0.307	0.413	3e-07
Q6PKH6	230	Dehydrogenase/reductase S	no	no	0.549	0.413	0.357	7e-07
Q8WNV7	279	Dehydrogenase/reductase S	yes	no	0.612	0.379	0.360	8e-07

>sp|Q8LEU3|NOL_ARATH Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1

 Score =  175 bits (444), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/143 (60%), Positives = 104/143 (72%), Gaps = 8/143 (5%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE HVWGTKCDV+
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVWGTKCDVT 139

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           EG +V +LVA++QKNLKY+DIW+
Sbjct: 140 EGKDVRELVAYSQKNLKYIDIWI 162

Required for chlorophyll b degradation. Chlorophyll b, chlorophyllide b, pheophorbide b and pheophytin b can be used as substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 9EC: 4

>sp|Q84ST4|NOL_ORYSJ Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1

 Score =  156 bits (394), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 71/107 (66%), Positives = 85/107 (79%), Gaps = 2/107 (1%)

Query: 58  IRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
           IRA++       +  +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV
Sbjct: 53  IRAEAVPGGGGVA--RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERV 110

Query: 118 DSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           +SAV  L++EFGEQHVWG  CDV EG +V  LV FA+  +KY+DIW+
Sbjct: 111 ESAVTDLKKEFGEQHVWGIVCDVREGKDVKALVDFARDKMKYIDIWI 157

Required for chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q5N800|NYC1_ORYSJ Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 55/100 (55%), Gaps = 15/100 (15%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE--------- 130
           P NV+ITGST+G+G ALA+EFL +GD V+I SRS E V   +  L E   E         
Sbjct: 170 PRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQEGLSVAKKKQ 229

Query: 131 ------QHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
                   V GT CDV +  +V  LV FA+  L  +DIW+
Sbjct: 230 REILLHAKVVGTSCDVCKPEDVKKLVNFAKDELGSIDIWI 269

Required for proper chloroplast degradation. Involved in chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q93ZA0|NYC1_ARATH Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1

 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 15/100 (15%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL--------------- 124
           P NV+ITGST+G+G ALA+EFL +GD VI+ SRS+E VD  V+ L               
Sbjct: 161 PRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESA 220

Query: 125 REEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           R++  +  V G  CDV +  +V  L  FA K L  ++IW+
Sbjct: 221 RKKLSDAKVVGIACDVCKPEDVEKLSNFAVKELGSINIWI 260

Involved in chlorophyll b degradation.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3

 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 3/106 (2%)

Query: 59  RADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
           RA +S   +SS   +R+P L     L+T ST GIG+A+A+   + G +V++ SR  + VD
Sbjct: 12  RAWNSVRMASSGMTRRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVD 70

Query: 119 SAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
            AV +L+ E     V GT C V +  +   LVA A K    +DI V
Sbjct: 71  QAVATLQGE--GLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILV 114

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 3/106 (2%)

Query: 59  RADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
           RA +S   +SS   +R+P L     L+T ST GIG+A+A+   + G +V++ SR  + VD
Sbjct: 12  RAWNSVRMASSGMTRRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVD 70

Query: 119 SAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
            AV +L+ E     V GT C V +  +   LVA A K    +DI V
Sbjct: 71  QAVATLQGE--GLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILV 114

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q13268|DHRS2_HUMAN Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 68  SSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           SS+ + R+ +L     ++TGST GIG+A+A+   + G +V+I SR  + VD A+  L+ E
Sbjct: 2   SSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGE 61

Query: 128 FGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
                V G  C V +  +   LVA A ++   VD  V
Sbjct: 62  --GLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLV 96

Displays NADPH-dependent dicarbonyl reductase activity in vitro with 3,4-Hexanedione, 2,3-Heptanedione and 1-Phenyl-1,2-propanedione as substrates. No reductase activity is displayed in vitro with steroids, retinoids and sugars as substrates. May inhibit cell replication.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O34782|YVRD_BACSU Uncharacterized oxidoreductase YvrD OS=Bacillus subtilis (strain 168) GN=yvrD PE=3 SV=1

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITGST GIG A AK FL+ G  VI+  R  E VD  ++ L    G   V G   D+S+
Sbjct: 10  VLITGSTSGIGKAAAKSFLQEGAAVIVNGRKQETVDRTIEELS---GYGTVHGAAADLSK 66

Query: 143 GNEVADLVAFAQKNLKYVDIWVFMSDL 169
            +E A   AF +K  +  DI + +++L
Sbjct: 67  TDEAA---AFIEKVNEIGDIDILVNNL 90

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6PKH6|DR4L2_HUMAN Dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L2 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 67  SSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           +SS   +R+P+      L+T ST GIG+A+A+   +   +V++ SR  + VD AV +L+ 
Sbjct: 18  ASSRMTRRDPLTNKV-ALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVATLQG 76

Query: 127 EFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           E     V GT C V +  +   LVA A K    +DI V
Sbjct: 77  E--GLSVTGTVCHVGKAEDRERLVAMAVKLHGGIDILV 112

Probable oxidoreductase.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=2

 Score = 53.1 bits (126), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)

Query: 57  IIRADSSSSSS---SSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
           ++RA S +  S   +S+ V+R   L     L+T ST GIG A+A+   + G +V++ SR 
Sbjct: 7   LLRACSQTWKSVRMASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK 66

Query: 114 AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
            E VD  V +L+ E     V GT C V +  +   LVA A      VDI V
Sbjct: 67  QENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILV 115

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	173
255546781	325	short-chain dehydrogenase, putative [Ric	0.601	0.32	0.836	3e-46
10178029	341	unnamed protein product [Arabidopsis tha	0.780	0.395	0.608	5e-42
18414726	348	chlorophyll(ide) b reductase NOL [Arabid	0.780	0.387	0.608	6e-42
449446317	352	PREDICTED: chlorophyll(ide) b reductase	0.531	0.261	0.815	5e-41
297806477	349	short-chain dehydrogenase/reductase fami	0.774	0.383	0.627	9e-41
224097534	370	predicted protein [Populus trichocarpa]	0.583	0.272	0.664	1e-39
356556680	349	PREDICTED: chlorophyll(ide) b reductase	0.658	0.326	0.658	2e-39
225424993	345	PREDICTED: chlorophyll(ide) b reductase	0.578	0.289	0.73	2e-38
357115706	554	PREDICTED: chlorophyll(ide) b reductase	0.641	0.200	0.639	2e-36
75298085	343	RecName: Full=Chlorophyll(ide) b reducta	0.606	0.306	0.663	3e-36

>gi|255546781|ref|XP_002514449.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223546445|gb|EEF47945.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  189 bits (481), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 87/104 (83%), Positives = 96/104 (92%)

Query: 66  SSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
           S SSSSV REPM+ PYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV+SAVQ+LR
Sbjct: 58  SQSSSSVNREPMVSPYNVLITGSTKGIGYALAKEFLKAGDNVMICSRSAERVESAVQNLR 117

Query: 126 EEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSDL 169
           EEFGEQHVWGTKCDV EG +V DLVAF+Q+NLKY+DIWVF  D+
Sbjct: 118 EEFGEQHVWGTKCDVREGQDVKDLVAFSQENLKYIDIWVFNLDV 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10178029|dbj|BAB11512.1| unnamed protein product [Arabidopsis thaliana]

 Score =  175 bits (444), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 87/143 (60%), Positives = 104/143 (72%), Gaps = 8/143 (5%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE HVWGTKCDV+
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVWGTKCDVT 139

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           EG +V +LVA++QKNLKY+DIW+
Sbjct: 140 EGKDVRELVAYSQKNLKYIDIWI 162

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414726|ref|NP_568145.1| chlorophyll(ide) b reductase NOL [Arabidopsis thaliana] gi|75301367|sp|Q8LEU3.1|NOL_ARATH RecName: Full=Chlorophyll(ide) b reductase NOL, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1-LIKE; Short=AtNOL; Short=Protein NYC1-LIKE; AltName: Full=Short-chain dehydrogenase/reductase NOL; Flags: Precursor gi|21553369|gb|AAM62462.1| unknown [Arabidopsis thaliana] gi|94442407|gb|ABF18991.1| At5g04900 [Arabidopsis thaliana] gi|134254417|dbj|BAF49742.1| short-chain dehydrogenase/reductase AtNOL1 [Arabidopsis thaliana] gi|332003419|gb|AED90802.1| chlorophyll(ide) b reductase NOL [Arabidopsis thaliana]

 Score =  175 bits (444), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 87/143 (60%), Positives = 104/143 (72%), Gaps = 8/143 (5%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE HVWGTKCDV+
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVWGTKCDVT 139

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           EG +V +LVA++QKNLKY+DIW+
Sbjct: 140 EGKDVRELVAYSQKNLKYIDIWI 162

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446317|ref|XP_004140918.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Cucumis sativus] gi|449494121|ref|XP_004159455.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Cucumis sativus]

 Score =  172 bits (435), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 75/92 (81%), Positives = 86/92 (93%)

Query: 73  KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           ++EPM+PPYNVLITGSTKGIGYALA++FLK GDNV+ICSRSAERV+S+VQSLREEFGEQ 
Sbjct: 75  QKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQR 134

Query: 133 VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           VWGTKCDV EG +V +LVAF QKNLKYVDIW+
Sbjct: 135 VWGTKCDVREGEDVKNLVAFLQKNLKYVDIWI 166

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806477|ref|XP_002871122.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316959|gb|EFH47381.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  171 bits (433), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 91/145 (62%), Positives = 106/145 (73%), Gaps = 11/145 (7%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSL-RASKSYHSPIIRADSSSSSSSSSSVKREPMLPP 80
           T LP   P CR    T RF      + R + S   P      S++  +  S KREPM PP
Sbjct: 26  TQLPFLSPLCRRRLLTERFGLATIVVTRQNLSVTPP------SAAMEARISGKREPMTPP 79

Query: 81  YNVLITGSTKG-IGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
           YNVLITGSTKG IGYALA+EFLKAGDNV+ICSRSAERV+SAVQSL+EEFGE HVWGTKCD
Sbjct: 80  YNVLITGSTKGFIGYALAREFLKAGDNVVICSRSAERVESAVQSLKEEFGE-HVWGTKCD 138

Query: 140 VSEGNEVADLVAFAQKNLKYVDIWV 164
           V EG +V +LVA++QKNLKY+DIW+
Sbjct: 139 VREGKDVRELVAYSQKNLKYIDIWI 163

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097534|ref|XP_002310976.1| predicted protein [Populus trichocarpa] gi|222850796|gb|EEE88343.1| predicted protein [Populus trichocarpa]

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 95/125 (76%), Gaps = 24/125 (19%)

Query: 64  SSSSSSSSVKREPMLPPYNVLITGSTK--------GIGYALAKEFLKAGDNVIICSRSAE 115
           + +SSSS++ REPMLPP+N+LITGSTK        GIGYALAKEFLKAGDNVIICSRSAE
Sbjct: 73  AQTSSSSALSREPMLPPFNILITGSTKELVDAFNPGIGYALAKEFLKAGDNVIICSRSAE 132

Query: 116 RVDSAVQSLREEFGEQHVW----------------GTKCDVSEGNEVADLVAFAQKNLKY 159
           RV+SAVQSLREEFGEQ VW                GTKCDV EG +V DLVAFAQ++LKY
Sbjct: 133 RVESAVQSLREEFGEQRVWLSILHTSGYESVPPLQGTKCDVREGKDVKDLVAFAQESLKY 192

Query: 160 VDIWV 164
           +DIW+
Sbjct: 193 IDIWI 197

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556680|ref|XP_003546651.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Glycine max]

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/123 (65%), Positives = 95/123 (77%), Gaps = 9/123 (7%)

Query: 43  NCFSLRAS-KSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFL 101
           N  S+ AS K+  SPI  A +S         K EPMLPP+NVLITGSTKGIGYALAKEFL
Sbjct: 49  NTLSVSASRKNSTSPIFLATASG--------KSEPMLPPFNVLITGSTKGIGYALAKEFL 100

Query: 102 KAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161
           KAGDNV+ICSRS ERV +AVQ+LR EFGEQHVWGTKCDV    +V +LV+FAQ+ +KY+D
Sbjct: 101 KAGDNVLICSRSDERVKTAVQNLRVEFGEQHVWGTKCDVKNAEDVKNLVSFAQEKMKYID 160

Query: 162 IWV 164
           IW+
Sbjct: 161 IWI 163

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424993|ref|XP_002266979.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic [Vitis vinifera] gi|297738201|emb|CBI27402.3| unnamed protein product [Vitis vinifera]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/100 (73%), Positives = 87/100 (87%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           + S+ +S    PMLPPYNVLITGSTKGIG+ALA+EFLKAGDNVII SRSAERV+S+V+SL
Sbjct: 60  TPSAQASNDSAPMLPPYNVLITGSTKGIGFALAREFLKAGDNVIISSRSAERVESSVESL 119

Query: 125 REEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           R EFG+ HVWGT CDV +G +V DLVAFAQ+NLKY+DIW+
Sbjct: 120 RREFGKHHVWGTTCDVRKGEDVKDLVAFAQENLKYIDIWI 159

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357115706|ref|XP_003559627.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Brachypodium distachyon]

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/111 (63%), Positives = 86/111 (77%)

Query: 54  HSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
           H  + R  + + S      +R+PM+PPYNVLITGSTKGIGYALAK+FL AGDNVIICSRS
Sbjct: 46  HRELARIQAEAISGGGGVARRDPMVPPYNVLITGSTKGIGYALAKKFLMAGDNVIICSRS 105

Query: 114 AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           AERV+SA   L++EFGEQHVWGT CDV EG +V  LV +A+  L+Y+DIWV
Sbjct: 106 AERVESATNDLKKEFGEQHVWGTVCDVREGKDVKALVDYARGKLQYIDIWV 156

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75298085|sp|Q84ST4.1|NOL_ORYSJ RecName: Full=Chlorophyll(ide) b reductase NOL, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1-LIKE; Short=OsNOL; Short=Protein NYC1-LIKE; AltName: Full=Short-chain dehydrogenase/reductase NOL; Flags: Precursor gi|29244639|gb|AAO73232.1| putative oxidoreductase protein [Oryza sativa Japonica Group] gi|50582763|gb|AAT78833.1| putative short chain dehydrogenase (having alternative splicing products) [Oryza sativa Japonica Group] gi|134254415|dbj|BAF49741.1| short-chain dehydrogenase/reductase NOL1 [Oryza sativa Japonica Group] gi|218193420|gb|EEC75847.1| hypothetical protein OsI_12846 [Oryza sativa Indica Group] gi|222625482|gb|EEE59614.1| hypothetical protein OsJ_11943 [Oryza sativa Japonica Group]

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 71/107 (66%), Positives = 85/107 (79%), Gaps = 2/107 (1%)

Query: 58  IRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
           IRA++       +  +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV
Sbjct: 53  IRAEAVPGGGGVA--RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERV 110

Query: 118 DSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           +SAV  L++EFGEQHVWG  CDV EG +V  LV FA+  +KY+DIW+
Sbjct: 111 ESAVTDLKKEFGEQHVWGIVCDVREGKDVKALVDFARDKMKYIDIWI 157

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	173
TAIR|locus:2175254	348	NOL "NYC1-like" [Arabidopsis t	0.526	0.261	0.815	7.8e-39
UNIPROTKB|Q84ST4	343	NOL "Chlorophyll(ide) b reduct	0.531	0.268	0.739	4.6e-34
UNIPROTKB|Q5N800	504	NYC1 "Probable chlorophyll(ide	0.491	0.168	0.44	2.2e-12
TAIR|locus:2119330	496	NYC1 "NON-YELLOW COLORING 1" [	0.491	0.171	0.42	4.4e-12
WB|WBGene00000976	257	dhs-13 [Caenorhabditis elegans	0.456	0.307	0.419	4.4e-10
UNIPROTKB|F5GWZ1	155	DHRS4 "Dehydrogenase/reductase	0.514	0.574	0.380	1.6e-08
UNIPROTKB|H7BYG2	170	DHRS4 "Dehydrogenase/reductase	0.514	0.523	0.380	1.6e-08
UNIPROTKB|F1PEY9	283	LOC490617 "Uncharacterized pro	0.491	0.300	0.390	1.8e-08
UNIPROTKB|Q9BTZ2	278	DHRS4 "Dehydrogenase/reductase	0.514	0.320	0.380	4.9e-08
UNIPROTKB|E9PFL3	192	DHRS4L2 "Dehydrogenase/reducta	0.514	0.463	0.369	6.8e-08

TAIR|locus:2175254 NOL "NYC1-like" [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 75/92 (81%), Positives = 88/92 (95%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             KREPM PPYN+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE H
Sbjct:    72 KREPMTPPYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-H 130

Query:   133 VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             VWGTKCDV+EG +V +LVA++QKNLKY+DIW+
Sbjct:   131 VWGTKCDVTEGKDVRELVAYSQKNLKYIDIWI 162

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=TAS

GO:0015996 "chlorophyll catabolic process" evidence=IDA

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q84ST4 NOL "Chlorophyll(ide) b reductase NOL, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 68/92 (73%), Positives = 79/92 (85%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV+SAV  L++EFGEQH
Sbjct:    66 RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQH 125

Query:   133 VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             VWG  CDV EG +V  LV FA+  +KY+DIW+
Sbjct:   126 VWGIVCDVREGKDVKALVDFARDKMKYIDIWI 157

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

UNIPROTKB|Q5N800 NYC1 "Probable chlorophyll(ide) b reductase NYC1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 174 (66.3 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 44/100 (44%), Positives = 56/100 (56%)

Query:    80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-------- 131
             P NV+ITGST+G+G ALA+EFL +GD V+I SRS E V   +  L E   E         
Sbjct:   170 PRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQEGLSVAKKKQ 229

Query:   132 -----H--VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
                  H  V GT CDV +  +V  LV FA+  L  +DIW+
Sbjct:   230 REILLHAKVVGTSCDVCKPEDVKKLVNFAKDELGSIDIWI 269

GO:0009536 "plastid" evidence=IDA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=IDA

GO:0042170 "plastid membrane" evidence=RCA

TAIR|locus:2119330 NYC1 "NON-YELLOW COLORING 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 4.4e-12, P = 4.4e-12
 Identities = 42/100 (42%), Positives = 58/100 (58%)

Query:    80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL--------------- 124
             P NV+ITGST+G+G ALA+EFL +GD VI+ SRS+E VD  V+ L               
Sbjct:   161 PRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESA 220

Query:   125 REEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             R++  +  V G  CDV +  +V  L  FA K L  ++IW+
Sbjct:   221 RKKLSDAKVVGIACDVCKPEDVEKLSNFAVKELGSINIWI 260

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IC

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

WB|WBGene00000976 dhs-13 [Caenorhabditis elegans (taxid:6239)]

 Score = 146 (56.5 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 34/81 (41%), Positives = 47/81 (58%)

Query:    84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
             L+T STKGIG+A+AK+   AG +V++CSR  E VD AV +LR E  + H  GT   V   
Sbjct:    15 LVTASTKGIGFAIAKQLGAAGASVVVCSRKKENVDEAVAALRLENIDAH--GTTAHVGNK 72

Query:   144 NEVADLVAFAQKNLKYVDIWV 164
             ++   L+ F       +DI V
Sbjct:    73 SDRTKLIDFTLDRFTKLDILV 93

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008667 "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity" evidence=IEA

GO:0009239 "enterobactin biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|F5GWZ1 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E G   
Sbjct:    26 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE-GLS- 82

Query:   133 VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             V GT C V +  +   LVA A K    +DI V
Sbjct:    83 VTGTVCHVGKAEDRERLVATAVKLHGGIDILV 114

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|H7BYG2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E G   
Sbjct:     8 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE-GLS- 64

Query:   133 VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             V GT C V +  +   LVA A K    +DI V
Sbjct:    65 VTGTVCHVGKAEDRERLVATAVKLHGGIDILV 96

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1PEY9 LOC490617 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 133 (51.9 bits), Expect = 1.8e-08, P = 1.8e-08
 Identities = 34/87 (39%), Positives = 52/87 (59%)

Query:    84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
             +ITGSTKGIG+A+A+   + G +V++ SR    VD AV +L+ E G   V GT C V + 
Sbjct:    42 VITGSTKGIGFAIARRLARDGAHVVVSSRKQHNVDRAVAALQGE-GLS-VTGTVCHVGKA 99

Query:   144 NEVADLVAFAQKNLKYVDIWVFMSDLH 170
              +   LVA A ++   VD  V ++ ++
Sbjct:   100 EDRERLVATALEHYGGVDFLVCVAGVN 126

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q9BTZ2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 129 (50.5 bits), Expect = 4.9e-08, P = 4.9e-08
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E G   
Sbjct:    26 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE-GLS- 82

Query:   133 VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             V GT C V +  +   LVA A K    +DI V
Sbjct:    83 VTGTVCHVGKAEDRERLVATAVKLHGGIDILV 114

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0005739 "mitochondrion" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IDA;TAS

GO:0006066 "alcohol metabolic process" evidence=IDA

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0042180 "cellular ketone metabolic process" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=IDA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IDA

GO:0000253 "3-keto sterol reductase activity" evidence=IDA

GO:0018455 "alcohol dehydrogenase [NAD(P)+

GO:0051262 "protein tetramerization" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0005102 "receptor binding" evidence=IPI

UNIPROTKB|E9PFL3 DHRS4L2 "Dehydrogenase/reductase SDR family member 4-like 2" [Homo sapiens (taxid:9606)]

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 34/92 (36%), Positives = 51/92 (55%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             +R+P+      L+T ST GIG+A+A+   +   +V++ SR  + VD AV +L+ E G   
Sbjct:    26 RRDPLTNKV-ALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVATLQGE-GLS- 82

Query:   133 VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             V GT C V +  +   LVA A K    +DI V
Sbjct:    83 VTGTVCHVGKAEDRERLVAMAVKLHGGIDILV 114

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G04900	short-chain dehydrogenase/reductase (SDR) family protein; short-chain dehydrogenase/reductase (SDR) family protein; FUNCTIONS IN- oxidoreductase activity, binding, catalytic activity; INVOLVED IN- metabolic process; LOCATED IN- chloroplast; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- NAD(P)-binding (InterPro-IPR016040), Glucose/ribitol dehydrogenase (InterPro-IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro-IPR002198); BEST Arabidopsis thaliana protein match is- short-chain dehydrogenase/reductase (SDR) family protein [...] (348 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	ATCLH1	ATCLH1 (ARABIDOPSIS THALIANA CORONATINE-INDUCED PROTEIN 1); chlorophyllase; Chlorophyllase is t [...] (324 aa)						•	•		0.950
	G4	G4; chlorophyll synthetase; Encodes a protein with chlorophyll synthase activity. This enzyme h [...] (387 aa)				•		•			0.925
	AT5G49000	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (372 aa)							•		0.925
	CH1	CH1 (CHLORINA 1); chlorophyllide a oxygenase; Encodes chlorophyllide a oxygenase which c [...] (536 aa)				•		•			0.910
	CLH2	ATCLH2; chlorophyllase; Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. [...] (318 aa)						•			0.899
	AT5G16960	NADP-dependent oxidoreductase, putative; NADP-dependent oxidoreductase, putative; FUNCTIONS IN- [...] (346 aa)							•		0.718
	AT4G33360	terpene cyclase/mutase-related; terpene cyclase/mutase-related; FUNCTIONS IN- coenzyme binding, [...] (344 aa)							•		0.718
	AT2G43420	3-beta hydroxysteroid dehydrogenase/isomerase family protein; 3-beta hydroxysteroid dehydrogena [...] (561 aa)							•		0.718
	AT4G13250	short-chain dehydrogenase/reductase (SDR) family protein; short-chain dehydrogenase/reductase ( [...] (496 aa)			•	•	•		•	•	0.669
	ACD2	ACD2 (ACCELERATED CELL DEATH 2); red chlorophyll catabolite reductase; Mutants have spontaneous [...] (319 aa)				•	•		•		0.656

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	173
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-19
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-15
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-14
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-14
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-14
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-14
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	6e-14
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	8e-14
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	8e-14
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-13
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-13
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-13
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	6e-13
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	7e-13
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	8e-13
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-12
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-12
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-12
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-12
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-12
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-12
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	3e-12
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	4e-12
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	4e-12
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-12
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	4e-12
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	5e-12
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	5e-12
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-11
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-11
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-11
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-11
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-10
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-10
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	2e-10
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-10
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	3e-10
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-10
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	4e-10
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	4e-10
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	8e-10
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-09
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	1e-09
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-09
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-09
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-09
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	3e-09
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	3e-09
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	4e-09
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	6e-09
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	8e-09
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	1e-08
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-08
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-08
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-08
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-08
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-08
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-08
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-08
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-08
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-08
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-08
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	5e-08
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	5e-08
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	6e-08
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	7e-08
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	8e-08
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-07
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-07
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-07
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-07
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	2e-07
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	3e-07
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	3e-07
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	3e-07
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-07
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	6e-07
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	6e-07
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	7e-07
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-07
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	8e-07
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	9e-07
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	9e-07
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-06
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-06
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-06
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-06
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-06
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-06
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-06
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-06
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-06
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-06
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	3e-06
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	3e-06
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-06
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-06
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	5e-06
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	5e-06
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	5e-06
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	6e-06
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	7e-06
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	7e-06
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	7e-06
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	9e-06
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	9e-06
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	1e-05
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-05
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-05
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-05
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	1e-05
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-05
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-05
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-05
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	2e-05
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-05
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-05
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	3e-05
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	3e-05
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-05
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	4e-05
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	5e-05
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	5e-05
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	5e-05
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	5e-05
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	5e-05
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-05
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	7e-05
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	7e-05
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	7e-05
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	8e-05
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	9e-05
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-04
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-04
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	1e-04
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-04
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-04
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-04
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-04
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-04
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	2e-04
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	3e-04
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-04
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	3e-04
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	5e-04
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	5e-04
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	5e-04
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	5e-04
cd01078	194	cd01078, NAD_bind_H4MPT_DH, NADP binding domain of	5e-04
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	6e-04
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	6e-04
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	6e-04
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	6e-04
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	6e-04
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	7e-04
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	8e-04
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	8e-04
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	9e-04
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	0.001
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	0.001
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	0.001
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	0.001
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	0.001
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	0.001
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	0.001
pfam08659	181	pfam08659, KR, KR domain	0.001
TIGR01915	219	TIGR01915, npdG, NADPH-dependent F420 reductase	0.002
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	0.002
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	0.002
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	0.002
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	0.002
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	0.003
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	0.003
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	0.003
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	0.003
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	0.004

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 80.0 bits (198), Expect = 7e-19
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG++ GIG A+A+   + G  V++  R+ E +        E  G   V   + DVS+
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA--IEALGGNAV-AVQADVSD 57

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V  LV  A +    +DI V
Sbjct: 58  EEDVEALVEEALEEFGRLDILV 79

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 71.4 bits (175), Expect = 2e-15
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWG 135
            L     L+TG++ GIG A+A+   + G   V+   RS E    A+ +  +E G      
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 136 TKCDVSEGNE-VADLVAFAQKNLKYVDIWV 164
              DVS+  E V  LVA A++    +DI V
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILV 91

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 68.6 bits (169), Expect = 1e-14
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 2/83 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             L+TG+++GIG A+A      G  V+I   + E  ++    LR   GE  V     DVS
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARV--LVFDVS 64

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   V  L+  A +    +DI V
Sbjct: 65  DEAAVRALIEAAVEAFGALDILV 87

Length = 246

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 68.5 bits (168), Expect = 2e-14
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             L+T ++ GIG A+A+   + G  V IC+R+ E ++ A   LR       V     D++
Sbjct: 3   VALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAG--VLAVVADLT 60

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +  ++  LV  A      VDI V
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILV 83

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 68.0 bits (167), Expect = 3e-14
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+  GIG  +A    K G  V+I   + E   +A ++L++  G+    G   DV++
Sbjct: 7   ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK--AIGVAMDVTD 64

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              +   + +A +    VDI V
Sbjct: 65  EEAINAGIDYAVETFGGVDILV 86

Length = 258

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 67.6 bits (166), Expect = 3e-14
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ--HVWGTKCDV 140
            L+TG+++GIG A+A +  K G  VII  RS+E      + + EE         G  CDV
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE---EGAEEVVEELKAYGVKALGVVCDV 57

Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
           S+  +V  +V   ++ L  +DI V
Sbjct: 58  SDREDVKAVVEEIEEELGPIDILV 81

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 6e-14
 Identities = 30/82 (36%), Positives = 44/82 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG + GIG A  +  L+AG +V IC R  ER+ SA   LRE+F    +   +CDV +
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLD 70

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +VA   A  +     VD+ V
Sbjct: 71  EADVAAFAAAVEARFGGVDMLV 92

Length = 265

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 66.9 bits (164), Expect = 8e-14
 Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 76  PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVW 134
             +     LITG++ GIG  LAK+  + G N+I+ +R  +++++  + L ++ G E  V 
Sbjct: 2   GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEV- 60

Query: 135 GTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
               D+S+   +  L    ++    +D+ V
Sbjct: 61  -IPADLSDPEALERLEDELKERGGPIDVLV 89

Length = 265

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 66.2 bits (162), Expect = 8e-14
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 6/82 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG T GIG ALA++FL+AG+ VII  R  ER+  A + L              DV +
Sbjct: 8   VLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHTIV------LDVGD 61

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V  L          +DI +
Sbjct: 62  AESVEALAEALLSEYPNLDILI 83

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 66.1 bits (162), Expect = 1e-13
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
             ITG   GIG A+AK F + G +V I  R  E +++A + +    G +     +CDV +
Sbjct: 6   AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGR-AHPIQCDVRD 64

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V   V    K    +DI +
Sbjct: 65  PEAVEAAVDETLKEFGKIDILI 86

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 65.6 bits (160), Expect = 2e-13
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+T GIG A+A+   K G  V +C+R  E + + V+ LRE   E    G  CDV   
Sbjct: 7   LVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVE--ADGRTCDVRSV 64

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E+  LVA A      +D+ V
Sbjct: 65  PEIEALVAAAVARYGPIDVLV 85

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 64.5 bits (158), Expect = 4e-13
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+++GIG A+A      G  V +  RS E     V+ ++      +    + DVS+
Sbjct: 3   ALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKA--LGGNAAALEADVSD 60

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V  LV   +     VDI V
Sbjct: 61  REAVEALVEKVEAEFGPVDILV 82

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 64.2 bits (157), Expect = 6e-13
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            VLITG++ GIG A A+ F KAG  +I+  R AER+      L  +F  + V   + DVS
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVK-VLPLQLDVS 60

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   +   +    +  + +DI V
Sbjct: 61  DRESIEAALENLPEEFRDIDILV 83

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 62.6 bits (153), Expect = 7e-13
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRS--AERVDSAVQSLREEFGEQHVWGTKCD 139
           VLITG T G+G ALA+     G  ++++ SR   A      V  L     E  V    CD
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVA--ACD 60

Query: 140 VSEGNEVADLVAFAQKNLKYVDI 162
           V++ + +A L+A     L  +D 
Sbjct: 61  VADRDALAALLAALPAALGPLDG 83

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 64.2 bits (157), Expect = 8e-13
 Identities = 25/80 (31%), Positives = 38/80 (47%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+ITG+  GIG   A+E  K G +VII  R+ E+ + A   +++E G   V   + D+S 
Sbjct: 4   VVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDLSS 63

Query: 143 GNEVADLVAFAQKNLKYVDI 162
              V             +DI
Sbjct: 64  LASVRQFAEEFLARFPRLDI 83

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 63.4 bits (155), Expect = 1e-12
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE--FGEQHVWGTKCDV 140
           VLITG + GIG ALAKE +K G NVII +RS  +++ AV+ +  E     Q V     D+
Sbjct: 4   VLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISADL 63

Query: 141 SEGNEVADLVAFAQKNLKYVDI 162
           S+  EV    A A +     D+
Sbjct: 64  SDYEEVEQAFAQAVEKGGPPDL 85

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 1e-12
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG   GIG A+A+ F +AG  V +C  S    ++A+ +         V  T  DV++
Sbjct: 14  VLVTGGASGIGRAIAEAFAEAGARVHVCDVS----EAALAATAARLPGAKVTATVADVAD 69

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V  +   A +    +D+ V
Sbjct: 70  PAQVERVFDTAVERFGGLDVLV 91

Length = 264

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 1e-12
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            LITG +KGIG+A+A+  L  G  V I +R  + ++ A   L     + +V G   DV +
Sbjct: 9   ALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN---KGNVLGLAADVRD 65

Query: 143 GNEVADLVA 151
             +V   V 
Sbjct: 66  EADVQRAVD 74

Length = 237

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 62.9 bits (154), Expect = 2e-12
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG++ GIG  +A+ F   G  V++  R+ E  +     +              DVS+
Sbjct: 8   AIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL---AGGRAIAVAADVSD 64

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V   VA A +    VDI V
Sbjct: 65  EADVEAAVAAALERFGSVDILV 86

Length = 251

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+  GIG A+A+    AG NV++     E  ++A +   +  G   V     DV++
Sbjct: 4   ALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGS--VIYLPADVTK 61

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            +E+AD++A A      +DI V
Sbjct: 62  EDEIADMIAAAAAEFGGLDILV 83

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT 136
            L     LITG++ GIG A A+   +AG  V++ +R  ER    +++L +E G       
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREER----LEALADEIGAGAALAL 58

Query: 137 KCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             DV++   V   +    +    +DI V
Sbjct: 59  ALDVTDRAAVEAAIEALPEEFGRIDILV 86

Length = 246

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 3e-12
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 83  VLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           VL+T +   GIG A A+  L+ G  V+I      R+      L  E G   V    CDV+
Sbjct: 20  VLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVT 79

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
              +V  L+  A + L  +D+ V
Sbjct: 80  SEAQVDALIDAAVERLGRLDVLV 102

Length = 262

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 62.2 bits (152), Expect = 4e-12
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG + GIG ALA      G  VI  +R+ ++++S    L  +  E      + DV++
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNPDKLESL-GELLNDNLE----VLELDVTD 57

Query: 143 GNEVADLVAFAQKNLKYVDI 162
              +   V    +    +D+
Sbjct: 58  EESIKAAVKEVIERFGRIDV 77

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 62.1 bits (151), Expect = 4e-12
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG TKGIGYA+ +E    G  V  C+R+ + +D  +   RE+     V G+ CDVS 
Sbjct: 9   ALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREK--GFKVEGSVCDVSS 66

Query: 143 GNE 145
            +E
Sbjct: 67  RSE 69

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 61.9 bits (151), Expect = 4e-12
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+ +GIG A+A      G  VI+     +   +  + +    G+      + DV +
Sbjct: 9   ALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGK--ARARQVDVRD 66

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              +   VA   ++   +DI V
Sbjct: 67  RAALKAAVAAGVEDFGRLDILV 88

Length = 251

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 61.9 bits (151), Expect = 4e-12
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             +ITG   GIG A AK  LK G  V I  R+      A   L+    +      +CDV+
Sbjct: 2   VAIITGGASGIGLATAKLLLKKGAKVAILDRNENP--GAAAELQAINPKVKATFVQCDVT 59

Query: 142 EGNEVADLVAFAQKNLKYVDI 162
              ++A     A +    VDI
Sbjct: 60  SWEQLAAAFKKAIEKFGRVDI 80

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 61.7 bits (150), Expect = 5e-12
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +LITG   GIG ALAK FL+ G+ VIIC R+ ER+  A     E   E       CDV++
Sbjct: 8   ILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEV------CDVAD 61

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            +   +LV + +K    +++ +
Sbjct: 62  RDSRRELVEWLKKEYPNLNVLI 83

Length = 245

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 5e-12
 Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           LITG++ GIG+A+AK + KAG  ++    + E VD  + + RE   E H  G  CDV++ 
Sbjct: 14  LITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAH--GYVCDVTDE 71

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
           + V  +V+  +K +  +DI V
Sbjct: 72  DGVQAMVSQIEKEVGVIDILV 92

Length = 265

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 60.6 bits (147), Expect = 1e-11
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+++GIG A A+     G  V IC+R   R+ +A     E      V G   DV +
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG-----VLGLAGDVRD 57

Query: 143 GNEVADLVA 151
             +V   V 
Sbjct: 58  EADVRRAVD 66

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 60.5 bits (147), Expect = 1e-11
 Identities = 31/81 (38%), Positives = 49/81 (60%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           LITG++KGIG A+A+EFL  G +V+I +R A+ +  A   L EEF E+ V G   DVS+ 
Sbjct: 13  LITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDD 72

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            +   ++ + + +   + I V
Sbjct: 73  EDRRAILDWVEDHWDGLHILV 93

Length = 257

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           L+TGST GIG  +A+    AG N+++     A  +++    L  + G + V     D+S+
Sbjct: 6   LVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVK-VLYHGADLSK 64

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              + D+VA+AQ+    VDI V
Sbjct: 65  PAAIEDMVAYAQRQFGGVDILV 86

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            VLITG++ GIG A A +  +AG  V + +R+ E +D  V  +R + G  H +   CD++
Sbjct: 373 VVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAY--TCDLT 430

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   V   V        +VD  V
Sbjct: 431 DSAAVDHTVKDILAEHGHVDYLV 453

Length = 657

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 58.1 bits (141), Expect = 1e-10
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             ++TG ++GIG A+A+   +AG +V I   SA R +   + L +++G +     KCDVS
Sbjct: 10  VAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVK-TKAYKCDVS 68

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
               V       QK+   +DI +
Sbjct: 69  SQESVEKTFKQIQKDFGKIDILI 91

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             L+TG+++GIG+ +A    +AG N++I SR+ E+ + A Q L E+ G        CDVS
Sbjct: 7   VALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEA-QQLIEKEG-VEATAFTCDVS 64

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   +   V   +++   +DI V
Sbjct: 65  DEEAIKAAVEAIEEDFGKIDILV 87

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 2e-10
 Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 3/84 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           NVL+T S++GIG+ +A+E LK G  V+I SR+ E ++ A++ L+ E+GE  V+  K D+S
Sbjct: 2   NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELK-EYGE--VYAVKADLS 58

Query: 142 EGNEVADLVAFAQKNLKYVDIWVF 165
           + +++ +LV  A + L  +D  V+
Sbjct: 59  DKDDLKNLVKEAWELLGGIDALVW 82

Length = 259

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+ITG++ GIG A A  F + G  V++ +RSAE +    + +RE  GE        DV++
Sbjct: 3   VVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGE--AIAVVADVAD 60

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V      A +    +D WV
Sbjct: 61  AAQVERAADTAVERFGRIDTWV 82

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 11/87 (12%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKC---- 138
           V+ITG++ GIG  LA    + G  +++ +R  ER++       E                
Sbjct: 6   VIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLEL------GAPSPHVVP 59

Query: 139 -DVSEGNEVADLVAFAQKNLKYVDIWV 164
            D+S+  +   +V  A K    +DI +
Sbjct: 60  LDMSDLEDAEQVVEEALKLFGGLDILI 86

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 56.5 bits (137), Expect = 3e-10
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 3/84 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV 140
             L+TG+ +GIG+ + ++  K+G   VI+ +R  ER  +AV+ LR E     V   + DV
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEG--LSVRFHQLDV 59

Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
           ++   +     F ++    +DI V
Sbjct: 60  TDDASIEAAADFVEEKYGGLDILV 83

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 4e-10
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+ITG + G+G A+AK F + G NV+I  R+ E+++ A   + E+F  Q V   + DV  
Sbjct: 4   VIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI-EQFPGQ-VLTVQMDVRN 61

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V  +V    +    +D  +
Sbjct: 62  PEDVQKMVEQIDEKFGRIDALI 83

Length = 252

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 4e-10
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+ITG+++GIG ALA    +AG  +++ +R+  R+ S  Q L +  GE  V     DVS+
Sbjct: 4   VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVV--PTDVSD 61

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                 L+  A      +DI V
Sbjct: 62  AEACERLIEAAVARFGGIDILV 83

Length = 263

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 56.1 bits (136), Expect = 8e-10
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 76  PMLPPYN---VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
            ML P     V+ITG++ G+G A A+ F + G  V++ +R  E +++    +R   GE  
Sbjct: 1   MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGE-- 58

Query: 133 VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
                 DV++   V      A++ L  +D WV
Sbjct: 59  ALAVVADVADAEAVQAAADRAEEELGPIDTWV 90

Length = 334

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 55.2 bits (133), Expect = 1e-09
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+T ST GIG A+A+   + G +V++ SR  + VD AV +L+ E     V GT C V + 
Sbjct: 14  LVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLS--VTGTVCHVGKA 71

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            +   LVA A      VDI V
Sbjct: 72  EDRERLVATAVNLHGGVDILV 92

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 12/70 (17%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVS 141
           VL+TG T+GIG  +A+ FL AG  V++C R A E VD        EF          DV 
Sbjct: 9   VLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPA----EF-------HAADVR 57

Query: 142 EGNEVADLVA 151
           + ++VA LV 
Sbjct: 58  DPDQVAALVD 67

Length = 252

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             LITG T+GIG A+A+ FL+ G  V +   SAE  + A     +E  E+ V+  KCDV 
Sbjct: 9   VALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE--NEA-----KELREKGVFTIKCDVG 61

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
             ++V       +K    VD+ V
Sbjct: 62  NRDQVKKSKEVVEKEFGRVDVLV 84

Length = 255

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG+ +GIGYA+A+   +AG  V    R+ E++   V  LR           K DV++
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRY--GYPFATYKLDVAD 58

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V ++V   ++    +D+ V
Sbjct: 59  SAAVDEVVQRLEREYGPIDVLV 80

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 9/85 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW-GTKCDVS 141
            L+TG+  GIG A AK     G  V++     E  ++A      E G      G  CDV+
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAA----AELGGPDRALGVACDVT 480

Query: 142 EGNEVADLVAFAQKNLKY--VDIWV 164
           +   V    AF +  L +  VDI V
Sbjct: 481 DEAAVQA--AFEEAALAFGGVDIVV 503

Length = 681

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 54.0 bits (131), Expect = 3e-09
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDV 140
             L+TG+++GIG A+A+     G NV+I  + S    ++ V  +    G+      + DV
Sbjct: 7   VALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALA--VQGDV 64

Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
           S+   V   V  A+     VDI V
Sbjct: 65  SDAESVERAVDEAKAEFGGVDILV 88

Length = 248

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 3e-09
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 4/73 (5%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           NV++ G T GI   +A+ F +AG NV + SRS E+VD+AV  L++   E    G   DV 
Sbjct: 11  NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPE--GLGVSADVR 68

Query: 142 EGNEVADLVAFAQ 154
           +   V    AFAQ
Sbjct: 69  DYAAVE--AAFAQ 79

Length = 264

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDV 140
             L+TG++ GIG A+A     AG NV++  RS  +  +  V+ ++   G+      + DV
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGK--AIAVQADV 62

Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
           S+  +V  L   A K    +DI V
Sbjct: 63  SKEEDVVALFQSAIKEFGTLDILV 86

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 4e-09
 Identities = 23/83 (27%), Positives = 40/83 (48%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             L+TG+ +GIG A+A+ F + G  V +    A   + A  ++  +     V     DV+
Sbjct: 9   VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT 68

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   VA  VA A++    +D+ V
Sbjct: 69  DAASVAAAVAAAEEAFGPLDVLV 91

Length = 260

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 6e-09
 Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+ +G+G A A+   +AG  V      A        +L    G  H      D+++
Sbjct: 10  ALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAH--AIAADLAD 67

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V      A   L  +D  V
Sbjct: 68  PASVQRFFDAAAAALGGLDGLV 89

Length = 250

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 52.7 bits (127), Expect = 8e-09
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ--HVWGTKCDV 140
           VLITG++ GIG ALA+EF KAG NV + +R  +R+D     L+ E       V     DV
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLD----ELKAELLNPNPSVEVEILDV 56

Query: 141 SEGNEVADLVAFAQKNLKYVDIWVF 165
           ++      ++A  +  L  +D+ + 
Sbjct: 57  TDEERNQLVIAELEAELGGLDLVII 81

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           N+LITGS +GIG+ LA    + G  +II   +AER + AV  LR+E  + H      +V+
Sbjct: 11  NILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAH--AAPFNVT 68

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
              EV   +   +K++  +D+ +
Sbjct: 69  HKQEVEAAIEHIEKDIGPIDVLI 91

Length = 254

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 52.1 bits (125), Expect = 1e-08
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG ++GIG  +A+ FL+AG  VII +R AE    A + L   +GE        D+S 
Sbjct: 9   VLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL-SAYGECI--AIPADLSS 65

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              +  LVA   +    +D+ V
Sbjct: 66  EEGIEALVARVAERSDRLDVLV 87

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 2/88 (2%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT 136
           +      LITG++ GIG A A  F KAG ++ + +RS + +++    LR    +   +  
Sbjct: 3   LNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAY-- 60

Query: 137 KCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             D+S    +A  +A   +     D+ +
Sbjct: 61  SIDLSNPEAIAPGIAELLEQFGCPDVLI 88

Length = 241

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            L+TG+ +G+G A+A    +AG +V++      E  +  V+++            + DV+
Sbjct: 9   ALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQA--VQADVT 66

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   +   VA A +    +DI V
Sbjct: 67  DKAALEAAVAAAVERFGRIDILV 89

Length = 249

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG ++G+G  +A+   +AG  V++ +R AE ++ A   L E  G   +W    DV++ 
Sbjct: 16  LVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHL-EALGIDALW-IAADVADE 73

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            ++  L     +   +VDI V
Sbjct: 74  ADIERLAEETLERFGHVDILV 94

Length = 259

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 51.9 bits (125), Expect = 2e-08
 Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 12/87 (13%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT-----K 137
           VLITG   GIG  LA EF K G  V+I       +D   +   E        G      K
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVI-------LDINEKGAEETANNVRKAGGKVHYYK 54

Query: 138 CDVSEGNEVADLVAFAQKNLKYVDIWV 164
           CDVS+  EV +     +K +  V I +
Sbjct: 55  CDVSKREEVYEAAKKIKKEVGDVTILI 81

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 4/73 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG ++G+G A+A+ F + G  V++    +E    A ++L +E G++ +   + DV++
Sbjct: 8   VLVTGGSRGLGAAIARAFAREGARVVVNYHQSE---DAAEALADELGDRAI-ALQADVTD 63

Query: 143 GNEVADLVAFAQK 155
             +V  + A A +
Sbjct: 64  REQVQAMFATATE 76

Length = 253

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG+++G+G A+A+ F + G  V++    +   +SA +++  E GE+     + DV +
Sbjct: 3   VLVTGASRGLGAAIARSFAREGARVVVNYYRST--ESA-EAVAAEAGER-AIAIQADVRD 58

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            ++V  ++  A+ +   VD  V
Sbjct: 59  RDQVQAMIEEAKNHFGPVDTIV 80

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG++KGIG A A+ F   G ++ + +R A+ +++    LR   G   V     D+S 
Sbjct: 10  VLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG-VDVAVHALDLSS 68

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                 L A A      +DI V
Sbjct: 69  PEAREQLAAEA----GDIDILV 86

Length = 259

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 3e-08
 Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TGS++GIGYALA+   +AG  VI+  R   ++ +A +SL+ +    H      DV++ 
Sbjct: 14  LVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHA--LAFDVTDH 71

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
           + V   +   +  +  +DI V
Sbjct: 72  DAVRAAIDAFEAEIGPIDILV 92

Length = 255

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.2 bits (123), Expect = 3e-08
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           N LITG+ +GIG A+A    K G NV + +R+ E +  AV    E +G + V  T  DVS
Sbjct: 9   NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLK-AVAEEVEAYGVKVVIAT-ADVS 66

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +  EV   +   +  L  +DI +
Sbjct: 67  DYEEVTAAIEQLKNELGSIDILI 89

Length = 239

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.6 bits (122), Expect = 5e-08
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT--KCDV 140
            ++TG++ GIG A+A+   K G  V+I   + +  + A Q L EE  E+       K DV
Sbjct: 8   AIVTGASGGIGRAIAELLAKEGAKVVI---AYDINEEAAQELLEEIKEEGGDAIAVKADV 64

Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
           S   +V +LV    +    +DI V
Sbjct: 65  SSEEDVENLVEQIVEKFGKIDILV 88

Length = 247

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 5e-08
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG--EQHVWGTKCDVS 141
           L+TGS +G+G+ +A+    AG +V++  R+A  +++AV +LR   G  E   +    D++
Sbjct: 15  LVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF----DIA 70

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   VA   A        +DI V
Sbjct: 71  DEEAVAAAFARIDAEHGRLDILV 93

Length = 256

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 5e-08
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +L+TG++ GIG A A++F + G  V+  +R  + +D+    +    G+       CD+S+
Sbjct: 43  ILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMA--VPCDLSD 100

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            + V  LVA  +K +  VDI +
Sbjct: 101 LDAVDALVADVEKRIGGVDILI 122

Length = 293

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 6e-08
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+ G + GIG ALA+ F   G  V I SRS +R+ +A ++L        V     D+++ 
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDE 57

Query: 144 NEVADLVA 151
             V    A
Sbjct: 58  AAVDAFFA 65

Length = 230

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 50.3 bits (120), Expect = 7e-08
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 2/83 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             ++TG   GIG A+A    KAG +V+I    +E  ++   ++++  G+    G +C+V+
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAI--GLECNVT 58

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
              ++  +V         + I V
Sbjct: 59  SEQDLEAVVKATVSQFGGITILV 81

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 50.3 bits (121), Expect = 8e-08
 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 5/88 (5%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT 136
           M      LITG + G G ALA+  L AG  V+   RS      A     E          
Sbjct: 1   MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEA----ARADF-EALHPDRALAR 55

Query: 137 KCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             DV++ + +  +VA A+     +D+ V
Sbjct: 56  LLDVTDFDAIDAVVADAEATFGPIDVLV 83

Length = 277

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 49.8 bits (119), Expect = 1e-07
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 62  SSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           ++SSS+SS   +R   L     L+TG   GIG ++ + F K G  V I     +  D   
Sbjct: 3   TASSSASSLPSQR---LLGKVALVTGGATGIGESIVRLFHKHGAKVCI----VDLQDDLG 55

Query: 122 QSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           Q++ +  G E +V    CDV+  ++V+  V F       +DI V
Sbjct: 56  QNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMV 99

Length = 280

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            L+TG+ K IG A+A+     G  V++  +RS          L            + D+S
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNS--AVLVQADLS 60

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +    ADLVA A +     D+ V
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLV 83

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+  GIG A+A+ +L  G  V+I      R   A   +              DV+ 
Sbjct: 9   ALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG-----PAAIAVSLDVTR 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            + +  +VA A +    +DI  
Sbjct: 64  QDSIDRIVAAAVERFGGIDILF 85

Length = 257

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 8/72 (11%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD--- 139
            LITG T GIG   A++FL  G  V I  R    +++A    R E GE      + D   
Sbjct: 9   ALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAA----RAELGES-ALVIRADAGD 63

Query: 140 VSEGNEVADLVA 151
           V+    +A  +A
Sbjct: 64  VAAQKALAQALA 75

Length = 249

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQHVWGTKCDV 140
           V++TGS +GIG A+A    K G  V++ ++  +R +   ++L+   E G + + G   DV
Sbjct: 9   VVVTGSGRGIGRAIAVRLAKEGSLVVVNAK--KRAEEMNETLKMVKENGGEGI-GVLADV 65

Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
           S       L           DI V
Sbjct: 66  STREGCETLAKATIDRYGVADILV 89

Length = 252

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG+T G G  + + F++ G  VI   R  ER    +Q L++E G+  ++  + DV  
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDN-LYIAQLDVRN 57

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              + +++A      + +D+ V
Sbjct: 58  RAAIEEMLASLPAEWRNIDVLV 79

Length = 248

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 21/71 (29%), Positives = 36/71 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG   GIG  +A   + AG  V+I  R+ +++ +A + +    G   V     DV++
Sbjct: 10  YLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD 69

Query: 143 GNEVADLVAFA 153
            ++VA  V  A
Sbjct: 70  EDQVARAVDAA 80

Length = 276

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 7/67 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKC---D 139
            ++TG+T GIG A A+E  K G NVI+ SR+ E++D+  + + E++G +    TK    D
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVE----TKTIAAD 59

Query: 140 VSEGNEV 146
            S G+++
Sbjct: 60  FSAGDDI 66

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +LITG+   IG A  K  L AG  +I+   +A  ++   + L   +  + +   + D++ 
Sbjct: 5   ILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIA-LELDITS 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              + +L+    +    +DI +
Sbjct: 64  KESIKELIESYLEKFGRIDILI 85

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG+  GIG A  + F +AGD V++    A+R     +   +  G  H      DVS+
Sbjct: 8   VLVTGAAGGIGRAACQRFARAGDQVVV----ADRNVERARERADSLGPDHH-ALAMDVSD 62

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             ++ +      +    +D+ V
Sbjct: 63  EAQIREGFEQLHREFGRIDVLV 84

Length = 520

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 47.5 bits (113), Expect = 6e-07
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 7/71 (9%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTK---CD 139
           V++TG ++GIG  + + F++ G  V+ C+R     ++A Q+L  E         K   CD
Sbjct: 12  VIVTGGSRGIGRGIVRAFVENGAKVVFCARG----EAAGQALESELNRAGPGSCKFVPCD 67

Query: 140 VSEGNEVADLV 150
           V++  ++  L+
Sbjct: 68  VTKEEDIKTLI 78

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 47.4 bits (113), Expect = 6e-07
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG   GIG A+AK     G  V++     E    A +      G     G +CDV+ 
Sbjct: 4   ALVTGGASGIGLAIAKRLAAEGAAVVVADIDPE---IAEKVAEAAQGGPRALGVQCDVTS 60

Query: 143 GNEVADLVAFAQKNLKY--VDIWV 164
             +V    AF Q  L++  +DI V
Sbjct: 61  EAQVQS--AFEQAVLEFGGLDIVV 82

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 47.1 bits (112), Expect = 7e-07
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG++ GIG A A+     G  V I +R  +R+++    L  E G+  V     DV++ 
Sbjct: 7   LVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLEL--DVTDE 64

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            +V   V    + L  +DI V
Sbjct: 65  QQVDAAVERTVEALGRLDILV 85

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.3 bits (113), Expect = 8e-07
 Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           ++ITG  +G+G A+A+   + G  + +   + E+++ AV        E  V G   +V++
Sbjct: 8   IVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE--VRGYAANVTD 65

Query: 143 GNEVADLVAFAQKNLKYVD 161
             +V    A   ++   ++
Sbjct: 66  EEDVEATFAQIAEDFGQLN 84

Length = 253

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 8e-07
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVS 141
           V+ITG + G+G A+A  F K    V+I  RS E   +   + +++  GE      K DV+
Sbjct: 10  VVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIA--VKGDVT 67

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
             ++V +L+  A K    +D+ +
Sbjct: 68  VESDVVNLIQTAVKEFGTLDVMI 90

Length = 261

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 47.1 bits (112), Expect = 9e-07
 Identities = 18/79 (22%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG++ GIG A+A+  ++ G  V+ C+R  +++++     +   G   ++  +CD+S  
Sbjct: 10  LVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSA-GYPTLFPYQCDLSNE 68

Query: 144 NEVADLVAFAQKNLKYVDI 162
            ++  + +  +   + VD+
Sbjct: 69  EQILSMFSAIRTQHQGVDV 87

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 9e-07
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%)

Query: 78  LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTK 137
           L    V+ITG++ GIG A A+ F + G  +++ +R  E + +  +  R    E  V  T 
Sbjct: 5   LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPT- 63

Query: 138 CDVSEGNEVADLVAFAQKNLKYVDIWV 164
            DV++ ++V  L   A      +D+WV
Sbjct: 64  -DVTDADQVKALATQAASFGGRIDVWV 89

Length = 330

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG   GIG+A+A+ F   G  V +  RS +  + A Q L       +  G  CDVS+
Sbjct: 18  AVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGG-----NAKGLVCDVSD 72

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V   VA        +DI V
Sbjct: 73  SQSVEAAVAAVISAFGRIDILV 94

Length = 255

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           +ITG   GIG A A+ F K G  V+I    A+  D A Q++  E G+  +    CDV+  
Sbjct: 8   IITGGASGIGEATARLFAKHGARVVI----ADIDDDAGQAVAAELGDPDISFVHCDVTVE 63

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            +V   V  A      +DI  
Sbjct: 64  ADVRAAVDTAVARFGRLDIMF 84

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
            +LITG++ G+G  +A+EF   G ++ +C+R  +R++     L+ E   ++
Sbjct: 4   KILITGASSGLGAGMAREFAAKGRDLALCARRTDRLE----ELKAELLARY 50

Length = 248

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 6/101 (5%)

Query: 65  SSSSSSSVKREPMLP-PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123
           S  +S++    P+   P  V ITG  +GIG A+A  F  AGD ++I  R AE      + 
Sbjct: 253 SGPASTAQAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAE----GAKK 308

Query: 124 LREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           L E  G++H+   + D+++   V    A  Q     +D+ V
Sbjct: 309 LAEALGDEHL-SVQADITDEAAVESAFAQIQARWGRLDVLV 348

Length = 520

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH-VWGTKCDVSE 142
           +ITG++ GIG A AK F + G  V++ +R    +D  V  +R E GE   + G   DV +
Sbjct: 10  IITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG---DVRD 66

Query: 143 GNEVADLVAFAQKNLKYVDI 162
                 LVA A +    +DI
Sbjct: 67  EAYAKALVALAVERFGGLDI 86

Length = 254

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWG 135
            LP    L+TGS++GIG   AK    AG +V++  R  A R +  V  +    G     G
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVG 62

Query: 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
              D+++   VA L+  A++    +D  V
Sbjct: 63  A--DLTDEESVAALMDTAREEFGGLDALV 89

Length = 248

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+  GIG ALA+ FL AGD V+     A  + +   +L    G+       CD+++
Sbjct: 5   ALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL----GDARFVPVACDLTD 60

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              +A  +A A      VD+ V
Sbjct: 61  AASLAAALANAAAERGPVDVLV 82

Length = 257

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG+ +GIG A+A+     G N+++   + E    +      E G  +      DV++
Sbjct: 5   AIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAG-YNAVAVGADVTD 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            ++V  L+  A +     D+ V
Sbjct: 64  KDDVEALIDQAVEKFGSFDVMV 85

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           ++TG   G+G A  +  L  G  V+I        +             +      DV+  
Sbjct: 6   VVTGGASGLGLATVERLLAQGAKVVILDLPNSPGE------TVAKLGDNCRFVPVDVTSE 59

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            +V   +A A+     +DI V
Sbjct: 60  KDVKAALALAKAKFGRLDIVV 80

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG    +G A+AKE  +AG  V I  R+ E+ ++ V  ++   GE      K DV +
Sbjct: 13  AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE--ALAVKADVLD 70

Length = 278

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+ITG+  GIG   A+E  + G  VI+  R   + + A   +R +     V     D++ 
Sbjct: 4   VIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLAS 63

Query: 143 GNEVADLVAFAQK 155
              +    AFA +
Sbjct: 64  LKSIR---AFAAE 73

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 45.2 bits (107), Expect = 3e-06
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           ++TG+ +G+G A+A  F +AG +V+I +R+  ++D   + +R      HV     D++  
Sbjct: 14  VVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHV--VAADLAHP 71

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
              A L   A +    +DI V
Sbjct: 72  EATAGLAGQAVEAFGRLDIVV 92

Length = 263

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGD-NVIICSRS---AERVDSAVQSLREEFGEQHVWGTKC 138
            LITG   G+G ALA+   + G   +++ SRS   A    + +  L        V    C
Sbjct: 3   YLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTV--VAC 60

Query: 139 DVSEGNEVADLVA 151
           DV++ + +A ++A
Sbjct: 61  DVADRDALAAVLA 73

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 45.2 bits (107), Expect = 4e-06
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           +ITG++ GIG A A    + G  V +    AE V   V  ++   G+   +    D+S+ 
Sbjct: 10  VITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGGKAKAY--HVDISDE 66

Query: 144 NEVADLVAFAQKNLKYVDI 162
            +V D  +  ++    VD+
Sbjct: 67  QQVKDFASEIKEQFGRVDV 85

Length = 272

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 45.0 bits (107), Expect = 5e-06
 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 5/59 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            LITG   G+G AL + F+  G  V +  RSAE+    V  LR +FG+  V G + DV 
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEK----VAELRADFGD-AVVGVEGDVR 60

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG   GIG A A  F + G  V++  R A   +  V  +RE  GE       CDV+  
Sbjct: 11  LVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALF--VACDVTRD 68

Query: 144 NEVADLVA 151
            EV  LV 
Sbjct: 69  AEVKALVE 76

Length = 253

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score = 45.1 bits (107), Expect = 5e-06
 Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 15/120 (12%)

Query: 36  STVRFRRNCFSLRASKSYHSPIIRADSSSS-----SSSSSSVKREPMLPPYNVLI----T 86
           S+ R R +  S   S S  S I  A ++ +     +S  +       +    VLI    +
Sbjct: 3   SSSRLRSSSASSLLSSSSSSSISPALAARAQGSRRASQVAGAAAAAAVEKKKVLIVNTNS 62

Query: 87  GSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE------QHVWGTKCDV 140
           G    IG+ LAKE +KAG  V + +R  E      +     F E      + VWG   DV
Sbjct: 63  GGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADV 122

Length = 378

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            L+TG T+G+G A+A+ F + G   ++IC R+AE+ ++    L     +      + D+S
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVF--VQADLS 66

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +  +   +VA A +    +D  V
Sbjct: 67  DVEDCRRVVAAADEAFGRLDALV 89

Length = 260

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 7e-06
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
            VL+TG++ GIG ALA+    AG  +++  R+AE++++    L   +  +H W
Sbjct: 7   RVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL--PYPGRHRW 57

Length = 263

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 44.6 bits (105), Expect = 7e-06
 Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           +ITG   GIG A   EF + G  V++       +  AV  LR E  + H  G  CDV   
Sbjct: 10  VITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVH--GVMCDVRHR 67

Query: 144 NEVADLVAFAQKNLKYVDI 162
            EV  L   A + L +VD+
Sbjct: 68  EEVTHLADEAFRLLGHVDV 86

Length = 275

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 44.1 bits (104), Expect = 7e-06
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG   GIG  +  +FL+AGD V+      ER     ++        +++    DV++
Sbjct: 4   AIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGP-----NLFFVHGDVAD 58

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V  +V    + L  +D+ V
Sbjct: 59  ETLVKFVVYAMLEKLGRIDVLV 80

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 9e-06
 Identities = 17/83 (20%), Positives = 34/83 (40%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++ G  + +G  L     + G  V +   ++E+  +  Q +  E+GE   +G   D + 
Sbjct: 5   AVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS 64

Query: 143 GNEVADLVAFAQKNLKYVDIWVF 165
              V  L     +    VD+ V+
Sbjct: 65  EQSVLALSRGVDEIFGRVDLLVY 87

Length = 259

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 44.1 bits (104), Expect = 9e-06
 Identities = 16/44 (36%), Positives = 28/44 (63%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             T S+KGIG+ +A+   +AG +VI+ SR+ E +  A + ++ E
Sbjct: 12  FTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE 55

Length = 263

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            V I G ++G+GYA+A   LK G  V I SR+  ++    ++L +     +V G   DVS
Sbjct: 7   KVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVG---DVS 63

Query: 142 EGNEVADLVAFAQKNLKYVD 161
                 +++  A K L  +D
Sbjct: 64  STESARNVIEKAAKVLNAID 83

Length = 238

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +LITG+ + IG ALA   L  G  VI+  R+      A+  LR    +      + D S 
Sbjct: 5   ILITGAGQRIGLALAWHLLAQGQPVIVSYRT-HY--PAIDGLR----QAGAQCIQADFST 57

Query: 143 GNEVADLVAFAQK 155
               A ++AF  +
Sbjct: 58  N---AGIMAFIDE 67

Length = 236

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 43.7 bits (103), Expect = 1e-05
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           +ITG+  GIG  +A  F  AG +V++   +A+  +  V  +++  G+   +  +CD++  
Sbjct: 15  IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AFACRCDITSE 72

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E++ L  FA   L  VDI V
Sbjct: 73  QELSALADFALSKLGKVDILV 93

Length = 255

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 11/82 (13%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +++TG + GIG A+ KE L  G NV+                  +   ++      DVS 
Sbjct: 12  IIVTGGSSGIGLAIVKELLANGANVVNADIHG-----------GDGQHENYQFVPTDVSS 60

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             EV   VA   +    +D  V
Sbjct: 61  AEEVNHTVAEIIEKFGRIDGLV 82

Length = 266

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 9/89 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------RVDSAVQSLREEFGEQHVWG 135
           + ITG+++GIG A+A +  + G NV+I +++AE        + +A + +    G      
Sbjct: 6   LFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGG--KALP 63

Query: 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
              D+ + ++V   V  A +    +DI V
Sbjct: 64  CIVDIRDEDQVRAAVEKAVEKFGGIDILV 92

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 10/92 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA--------VQSLREEFGEQHV- 133
             +TG+++GIG A+A    KAG  V++ +++A   D+         ++   EE       
Sbjct: 6   AFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGGQ 65

Query: 134 -WGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
                 DV + ++V  LV         +DI V
Sbjct: 66  ALPIVVDVRDEDQVRALVEATVDQFGRLDILV 97

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 8/74 (10%)

Query: 84  LITGSTKGIGYALAKEFLKAGD-NVIICSRS-----AERVDSAVQSLREEFGEQHVWGTK 137
           L+TG   GIG ALA+   +     +++  RS      E     + +L             
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLY--IS 266

Query: 138 CDVSEGNEVADLVA 151
            DV++   V  L+ 
Sbjct: 267 ADVTDAAAVRRLLE 280

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 11/83 (13%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            V +TG+ +GIGYA+A  F++AG  VI   ++    +           +        DVS
Sbjct: 10  TVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE-----------DYPFATFVLDVS 58

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   VA +          +D+ V
Sbjct: 59  DAAAVAQVCQRLLAETGPLDVLV 81

Length = 252

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 13/85 (15%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVS 141
            L+TG TKGIG A     L+AG  V+  +RS  + +   V+ +              D++
Sbjct: 12  ALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVA------------ADLT 59

Query: 142 EGNEVADLVAFAQKNLKYVDIWVFM 166
                A +     + L  VDI V +
Sbjct: 60  TAEGCAAVARAVLERLGGVDILVHV 84

Length = 260

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            V+ITG+  G+G A+A  + + G  + +   + E  +  ++ LRE  G+      +CDV 
Sbjct: 2   RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFY--QRCDVR 59

Query: 142 EGNEVADLVAFAQ---KNLKYVDIWV 164
              + + L A AQ   +    +D+ V
Sbjct: 60  ---DYSQLTALAQACEEKWGGIDVIV 82

Length = 270

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 8/67 (11%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLI G+++GIG    +++   G  VI  +R A     A+ +L+    E        DV++
Sbjct: 4   VLIVGASRGIGREFVRQYRADGWRVIATARDAA----ALAALQALGAEALA----LDVAD 55

Query: 143 GNEVADL 149
              VA L
Sbjct: 56  PASVAGL 62

Length = 222

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           L+TG+++GIG A+AK   + G +V++  + S    +  V  +    G+      + DVS+
Sbjct: 7   LVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGK--AIAVQADVSD 64

Query: 143 GNEVADLVAFAQKNLKYVDIWVF 165
            ++VA L   A+K    VDI V 
Sbjct: 65  PSQVARLFDAAEKAFGGVDILVN 87

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 14/49 (28%), Positives = 23/49 (46%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             +ITG T  +G A+A+   +AG  V    R+ E+ D   + +    G 
Sbjct: 7   VAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGR 55

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 18/40 (45%), Positives = 23/40 (57%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
           VLITG+T GIG  LA ++ K G  VI C R+   +D    
Sbjct: 4   VLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT 43

Length = 240

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V++TG+  GIG   A  F + G  V+         +   + +R      H +  + DVS+
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAY--RVDVSD 375

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            + +     + +      DI V
Sbjct: 376 ADAMEAFAEWVRAEHGVPDIVV 397

Length = 582

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 42.2 bits (100), Expect = 4e-05
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 7/67 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS- 141
            LITG   GIG AL + FL  G  V +  RSAE+    + SLR+ FG+ HV   + DV+ 
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLERSAEK----LASLRQRFGD-HVLVVEGDVTS 63

Query: 142 -EGNEVA 147
              N+ A
Sbjct: 64  YADNQRA 70

Length = 263

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 42.2 bits (99), Expect = 4e-05
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           ++TG+  GIG  +A E  +AG  V I   + +  ++    + +  G+    G   DV+  
Sbjct: 11  VVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGK--AIGVAMDVTNE 68

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
           + V   +    +    VDI V
Sbjct: 69  DAVNAGIDKVAERFGSVDILV 89

Length = 262

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 42.0 bits (99), Expect = 5e-05
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+ +GIG+A+AK  ++ G  V I   + E   +A   L ++ G+      K DVS+ 
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGK--AIAVKADVSDR 63

Query: 144 NEVADLVAFAQKNL 157
           ++V   V       
Sbjct: 64  DQVFAAVRQVVDTF 77

Length = 256

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 6/82 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+++GIG  +A+   + G  V +  R+ E + +             V     D  +
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALS------ASGGDVEAVPYDARD 56

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +   LV   +     +D+ V
Sbjct: 57  PEDARALVDALRDRFGRIDVLV 78

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 23/85 (27%), Positives = 44/85 (51%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT 136
           ML    +LITG+   IG AL K  L+AG  VI      E ++  ++SL +EF  + +   
Sbjct: 1   MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLV 60

Query: 137 KCDVSEGNEVADLVAFAQKNLKYVD 161
           + D+++   + + ++ + +    +D
Sbjct: 61  ELDITDQESLEEFLSKSAEKYGKID 85

Length = 256

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 41.9 bits (98), Expect = 5e-05
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF--GEQHVWGTKCDVS 141
           LITG++ GIG  +A  +++AG  V I +R  +    A++ L +E       V    CDVS
Sbjct: 13  LITGASTGIGKRVALAYVEAGAQVAIAARHLD----ALEKLADEIGTSGGKVVPVCCDVS 68

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +  +V  ++      L  +DI V
Sbjct: 69  QHQQVTSMLDQVTAELGGIDIAV 91

Length = 253

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            LITG+++GIG A+A+E L     +++  R AER+D     L
Sbjct: 6   ALITGASRGIGAAIARE-LAPTHTLLLGGRPAERLDELAAEL 46

Length = 227

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.5 bits (98), Expect = 6e-05
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG  +GIG  +A+    AG ++ I  R  +   +A Q      G + V     DV++ 
Sbjct: 6   LVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE-VIFFPADVADL 64

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
           +    ++  AQ     +D  V
Sbjct: 65  SAHEAMLDAAQAAWGRIDCLV 85

Length = 256

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 7e-05
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG++ G+G   A+   +AG  V++ SR  ER+      +  E G  HV     DV++ 
Sbjct: 13  LVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV--VSLDVTDY 70

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
             +   VA A+     +DI V
Sbjct: 71  QSIKAAVAHAETEAGTIDILV 91

Length = 258

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 41.4 bits (98), Expect = 7e-05
 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 9/89 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------RVDSAVQSLREEFGEQHVWG 135
           + ITG+++GIG A+A    + G N++I +++AE        + +A + + E  G Q +  
Sbjct: 9   LFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEI-EAAGGQALP- 66

Query: 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
              DV + ++VA  VA A +    +DI V
Sbjct: 67  LVGDVRDEDQVAAAVAKAVERFGGIDICV 95

Length = 273

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 7e-05
 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 6/82 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V ITG  +GIG A A+     G  V I              L        V G   DV++
Sbjct: 8   VAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGL------VVGGPLDVTD 61

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
               A  +   + +L  +D+ V
Sbjct: 62  PASFAAFLDAVEADLGPIDVLV 83

Length = 273

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 41.3 bits (97), Expect = 8e-05
 Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNV-IICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           ++TG+++GIG A+A E    G ++ I      ++    V  +         +    D+ E
Sbjct: 5   IVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQ--ADIGE 62

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            ++   L+  A ++   +D  V
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLV 84

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 41.1 bits (97), Expect = 9e-05
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 9/78 (11%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDN--VIICSRSAERVDSAVQSLREEF--GEQHVWGTKC 138
           +++TG+++GIG ALA+E LK G    V++ +RS E     +Q L+EE   G +     K 
Sbjct: 2   IILTGASRGIGRALAEELLKRGSPSVVVLLARSEE----PLQELKEELRPGLRVTTV-KA 56

Query: 139 DVSEGNEVADLVAFAQKN 156
           D+S+   V  L+   +K 
Sbjct: 57  DLSDAAGVEQLLEAIRKL 74

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVI 108
            VLITG+  GIG A A+ FL  G  V 
Sbjct: 7   TVLITGAASGIGLAQARAFLAQGAQVY 33

Length = 235

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
            ITG+++G G A  +  L+ GD V+  +R    +      L E++G++ +     DV++ 
Sbjct: 7   FITGASRGFGRAWTEAALERGDRVVATARDTATLA----DLAEKYGDR-LLPLALDVTDR 61

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
             V   V  A ++   +DI V
Sbjct: 62  AAVFAAVETAVEHFGRLDIVV 82

Length = 275

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           ++TG+  G G  +A+ F + G  V+I   +A+      + +  + GE  +   + DV++ 
Sbjct: 9   IVTGAGSGFGEGIARRFAQEGARVVIADINAD----GAERVAADIGEAAIA-IQADVTKR 63

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            +V  +V  A      +DI V
Sbjct: 64  ADVEAMVEAALSKFGRLDILV 84

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG  +GIG  +A+   K G  V +   + E      + +  + G + V   K DVS+ 
Sbjct: 4   LVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEI-NQAGGKAV-AYKLDVSDK 61

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
           ++V   +  A +     D+ V
Sbjct: 62  DQVFSAIDQAAEKFGGFDVMV 82

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
             +TG   GIG   A+     G +V++   + E  ++    +  +FG       K DV++
Sbjct: 417 AFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD 476

Query: 143 GNEVADLVAFAQKNLKY--VDIWVFMSDLHSSS 173
              V    AFA   L Y  VDI V  + + +SS
Sbjct: 477 EQAVK--AAFADVALAYGGVDIVVNNAGIATSS 507

Length = 676

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 8/83 (9%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            VLITG + GIG ALA  F  AG  V   +R AE V        E          + DV+
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV--------EALAAAGFTAVQLDVN 54

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +G  +A L    +     +D+ +
Sbjct: 55  DGAALARLAEELEAEHGGLDVLI 77

Length = 274

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 14/32 (43%), Positives = 24/32 (75%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114
           V+ITG+++G+G A+A + L+ G +VI  SR+ 
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRTE 35

Length = 251

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 40.3 bits (94), Expect = 2e-04
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           ++ITG+  GIG+  A+ F   G +VI+  R+  R  +AV  + EE+ +  V     D++ 
Sbjct: 4   IIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDLAS 63

Query: 143 GNEVADLV-AFAQKNL 157
              V     AF  KN 
Sbjct: 64  LRSVQRFAEAFKAKNS 79

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
            L+TG+ KGIG A  K   KAG  V+  SR+   +DS V+
Sbjct: 10  ALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVR 49

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
            ITG++ G G  + +  L  GD V    R  +    A+  L+  +G++ +W  + DV++ 
Sbjct: 6   FITGASSGFGRGMTERLLARGDRVAATVRRPD----ALDDLKARYGDR-LWVLQLDVTDS 60

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
             V  +V  A   L  +D+ V
Sbjct: 61  AAVRAVVDRAFAALGRIDVVV 81

Length = 276

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW-GTKC-DVS 141
           L+TG+ +GIG A+A+E L  G  VI    S    D A     EE+G        K  DV+
Sbjct: 6   LVTGAKRGIGSAIARELLNDGYRVIATYFSGN--DCAKD-WFEEYGFTEDQVRLKELDVT 62

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +  E A+ +A  ++    VDI V
Sbjct: 63  DTEECAEALAEIEEEEGPVDILV 85

Length = 245

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 10/76 (13%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
               LI G+++G+G  L    L+ G  V    R  ++ D+A+Q+L     E+        
Sbjct: 1   KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ-DTALQALPGVHIEK-------- 51

Query: 140 VSEGNEVADLVAFAQK 155
             + N+ A L    Q+
Sbjct: 52  -LDMNDPASLDQLLQR 66

Length = 225

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
            ++ITG T  IG AL +    AG  V++ SR   + 
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKA 36

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 9/82 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V++TG+ +GIG A+A+  L+AG  VI        +      LR          T  DV++
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRL---------TPLDVAD 51

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V ++ +        +D  V
Sbjct: 52  AAAVREVCSRLLAEHGPIDALV 73

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG  +G+G A A+  +  G  V++     E   +A   L +     H+     DV++
Sbjct: 8   AIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFHL-----DVTD 62

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            +    +V  A++    +D+ V
Sbjct: 63  EDGWTAVVDTAREAFGRLDVLV 84

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
           +LITG T  IG AL +   K G  V I +RS    
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPG 35

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 39.1 bits (92), Expect = 5e-04
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 87  GSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEV 146
                I +A+AK   + G  V++ +        AV  L +E     +     DV+   ++
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVI---PLDVTSDEDI 59

Query: 147 ADLVAFAQKNLKYVDIWVF 165
            +L    +++   +D  V 
Sbjct: 60  DELFEKVKEDGGKIDFLVH 78

Length = 239

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE-EFGEQHVWGTKCDVS 141
            +ITGS+ GIG   A  F + G  + +  R AER++   QS  +    E+ +     D++
Sbjct: 6   AIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADLT 65

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           E      +++        +DI V
Sbjct: 66  EEEGQDRIISTTLAKFGRLDILV 88

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+ G++ GIG A A E   AG  V + +R  E+ +  V  +R + GE        DV++
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGE--AVAFPLDVTD 70

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            + V   VA A++ L  +++ V
Sbjct: 71  PDSVKSFVAQAEEALGEIEVLV 92

Length = 274

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 13/45 (28%), Positives = 27/45 (60%)

Query: 76  PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120
             L    +L+TG+++G+G  +AK +  AG  VI+ +R  ++++  
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKV 46

Length = 239

>gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 16/49 (32%), Positives = 22/49 (44%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             ++ G T  +G   A    + G  V++  R  ER   A  SLR  FGE
Sbjct: 30  TAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE 78

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 13/86 (15%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKC----- 138
           LITG+ +GIG  +A+ F + G N+I+   S E     ++ L +E   +   G +C     
Sbjct: 10  LITGALQGIGEGIARVFARHGANLILLDISPE-----IEKLADELCGR---GHRCTAVVA 61

Query: 139 DVSEGNEVADLVAFAQKNLKYVDIWV 164
           DV +   VA  +  A++    +DI V
Sbjct: 62  DVRDPASVAAAIKRAKEKEGRIDILV 87

Length = 263

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+++GIG A+AK   + G +VI+ SR  +   +   ++    G+       C + E 
Sbjct: 12  LVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALA--CHIGEM 69

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            ++  L A  ++    +DI V
Sbjct: 70  EQIDALFAHIRERHGRLDILV 90

Length = 252

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 75  EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHV 133
             M  P   L+TG+ + IG A+A +    G +V +  +RS +  ++    +R        
Sbjct: 4   MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVA 63

Query: 134 WGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
              + D+++  EV  LVA A   L  + + V
Sbjct: 64  --LQADLADEAEVRALVARASAALGPITLLV 92

Length = 258

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 25/76 (32%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERV------------------------ 117
           VLITG+++GIG  L ++ L  G+N +I   R                             
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 118 DSAVQSLREEFGEQHV 133
             + +++ E  G+  +
Sbjct: 61  AESAEAVAERLGDAGL 76

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 38.3 bits (89), Expect = 6e-04
 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 11/83 (13%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            LI G+T GIG ALA+     G  +++  R A     A+  L  E G             
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDA----GALAGLAAEVGALAR-----PADV 51

Query: 143 GNEVADLVAFAQKNLKYVDIWVF 165
             E+   V    + L  +D+ V+
Sbjct: 52  AAELE--VWALAQELGPLDLLVY 72

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           LITG+  GIG A A    K G  V +  R+  R + A + +  E G Q+++    D+S+ 
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDP 64

Query: 144 NEVADLV-AFAQK 155
            +V + V  F ++
Sbjct: 65  KQVWEFVEEFKEE 77

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 85  ITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGN 144
           ITG+  G G A A+     G  +++     + +D AV  LR +  E  V G + DVS+  
Sbjct: 11  ITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAE--VLGVRTDVSDAA 68

Query: 145 EV-----ADLVAFAQKNL 157
           +V     A L  F   +L
Sbjct: 69  QVEALADAALERFGAVHL 86

Length = 287

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS-AVQSLREEFGEQHVWGTKCDVS 141
             + G+  G+G A+A+ F   G +V + +R   ++++  V  +R+  G         D  
Sbjct: 2   AAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVP--TDAR 59

Query: 142 EGNEVADLVAFAQKNLKYVDIWVF 165
           + +EV  L    ++ +  +++ V+
Sbjct: 60  DEDEVIALFDLIEEEIGPLEVLVY 83

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 9e-04
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           ++TG+++GIG A+A+     G  V +  + SA   D  V  +    G       + DV++
Sbjct: 9   IVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGR--AIAVQADVAD 66

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V  L   A+     +D+ V
Sbjct: 67  AAAVTRLFDAAETAFGRIDVLV 88

Length = 245

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 38.3 bits (89), Expect = 0.001
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 13/83 (15%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             ++TG ++GIG A+     + G NVI      E   + V               K DVS
Sbjct: 8   VAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK-EPSYNDVDYF------------KVDVS 54

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
              +V   + +       +DI V
Sbjct: 55  NKEQVIKGIDYVISKYGRIDILV 77

Length = 258

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 7/68 (10%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           ++TG ++G+G ALA++ L+ G  V+  +RS         SL    GE+     + D+S+ 
Sbjct: 5   IVTGHSRGLGAALAEQLLQPGIAVLGVARSRH------PSLAAAAGERLAE-VELDLSDA 57

Query: 144 NEVADLVA 151
              A  +A
Sbjct: 58  AAAAAWLA 65

Length = 243

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           LITGS +GIG A A+ +++ G  V I   + E   +    +              DV++ 
Sbjct: 7   LITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEI-----GPAACAISLDVTDQ 61

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
             +   VA        +DI V
Sbjct: 62  ASIDRCVAALVDRWGSIDILV 82

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT--KCDV 140
            L+TG ++GIG A+A    + G +V+I  R +     A   +  E  E        + DV
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKS---KDAAAEVAAEIEELGGKAVVVRADV 57

Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
           S+  +V ++ A  ++    +D+ V
Sbjct: 58  SQPQDVEEMFAAVKERFGRLDVLV 81

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 79  PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            P  V ITG++ GIG ALA+E+ + G  + + +R  + + +    L +
Sbjct: 1   MPLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK 48

Length = 257

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT----KC 138
           +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  W       C
Sbjct: 7   ILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTC 66

Query: 139 DVSEGNEVADLVA 151
                 ++A  +A
Sbjct: 67  TSENCQQLAQRIA 79

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFG 129
           ++I+G T+GIG A+  EF ++G N+     S  E  +   + L +++G
Sbjct: 11  LVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG 58

Length = 260

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 37.1 bits (87), Expect = 0.001
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQ--HVWGTKCD 139
            L+TG   G+G  LA+   + G  ++++ SRS    D   ++L  E   +   V    CD
Sbjct: 3   YLVTGGLGGLGLELARWLAERGARHLVLLSRSGA-PDPEAEALLAELEARGAEVTVVACD 61

Query: 140 VSEGNEVADLVA 151
           VS+ + V  L+A
Sbjct: 62  VSDRDAVRALLA 73

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|233635 TIGR01915, npdG, NADPH-dependent F420 reductase

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 17/51 (33%), Positives = 23/51 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           + + G T   G  LA    KAG+ +II SR  E+ + A     EE G    
Sbjct: 3   IAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGS 53

This model represents a subset of a parent family described by pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase [Energy metabolism, Electron transport]. Length = 219

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 17/32 (53%), Positives = 21/32 (65%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114
           VL+TG+TKGIG AL+      G  VI  +RSA
Sbjct: 6   VLVTGATKGIGLALSLRLANLGHQVIGIARSA 37

Length = 234

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           ++TG  KGIG A+     + G  V+I  + S E  ++ V  L +E  +  V+  + DVS+
Sbjct: 10  IVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHD--VYAVQADVSK 67

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +   LV  A  +   VDI V
Sbjct: 68  VEDANRLVEEAVNHFGKVDILV 89

Length = 247

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119
           +LITG T  IG AL     K G  V I +R   +   
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ 37

Length = 297

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 9/73 (12%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            +L+TG    IG  L +  L AG +V    R  + +D              V     D++
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD---------PLLSGVEFVVLDLT 52

Query: 142 EGNEVADLVAFAQ 154
           + + V +L     
Sbjct: 53  DRDLVDELAKGVP 65

Length = 314

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+++G   G+G  LA    +AG +V++ +R+AER+D     + +  G + +     D+++
Sbjct: 8   VVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-GRRALA-VPTDITD 65

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            ++ A+LVA A +    VD  V
Sbjct: 66  EDQCANLVALALERFGRVDALV 87

Length = 258

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 36.7 bits (85), Expect = 0.003
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           + ITGS+ G+G A A+  L  G  V++ +RS +R  +  ++         + G    ++E
Sbjct: 10  IFITGSSDGLGLAAARTLLHQGHEVVLHARSQKRA-ADAKAACPG-AAGVLIGDLSSLAE 67

Query: 143 GNEVADLV 150
             ++AD V
Sbjct: 68  TRKLADQV 75

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            L+TGS++GIG A+A    + G D  +  +RS +  +   + +     +      K +V 
Sbjct: 7   ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALA--VKANVG 64

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +  ++ ++ A   +    +D++V
Sbjct: 65  DVEKIKEMFAQIDEEFGRLDVFV 87

Length = 250

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
            +LI G+T  I  A A+ +  AG  + + +R  ER++     LR
Sbjct: 3   KILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLR 46

Length = 243

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 36.5 bits (85), Expect = 0.004
 Identities = 14/51 (27%), Positives = 22/51 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VL+TG+T  I   + ++ LKAG  V    RS  +       L+       +
Sbjct: 2   VLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRL 52

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	173
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.87
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.86
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.86
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.83
KOG1208	314	consensus Dehydrogenases with different specificit	99.83
PRK05854	313	short chain dehydrogenase; Provisional	99.83
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.81
KOG0725	270	consensus Reductases with broad range of substrate	99.8
PRK07062	265	short chain dehydrogenase; Provisional	99.8
PRK06720	169	hypothetical protein; Provisional	99.78
PRK08339	263	short chain dehydrogenase; Provisional	99.78
PRK07063	260	short chain dehydrogenase; Provisional	99.78
PRK07478	254	short chain dehydrogenase; Provisional	99.78
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK06197	306	short chain dehydrogenase; Provisional	99.78
PRK08862	227	short chain dehydrogenase; Provisional	99.78
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.78
PRK05867	253	short chain dehydrogenase; Provisional	99.78
PRK05876	275	short chain dehydrogenase; Provisional	99.77
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK06139	330	short chain dehydrogenase; Provisional	99.77
PRK05866	293	short chain dehydrogenase; Provisional	99.77
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.77
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK08589	272	short chain dehydrogenase; Validated	99.77
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK07791	286	short chain dehydrogenase; Provisional	99.77
PRK08303	305	short chain dehydrogenase; Provisional	99.76
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PLN02253	280	xanthoxin dehydrogenase	99.75
PRK07109	334	short chain dehydrogenase; Provisional	99.75
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.75
PRK09186	256	flagellin modification protein A; Provisional	99.75
PRK05872	296	short chain dehydrogenase; Provisional	99.75
PRK08265	261	short chain dehydrogenase; Provisional	99.75
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK05599	246	hypothetical protein; Provisional	99.75
PRK06114	254	short chain dehydrogenase; Provisional	99.74
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK06194	287	hypothetical protein; Provisional	99.74
PRK08251	248	short chain dehydrogenase; Provisional	99.74
PRK07890	258	short chain dehydrogenase; Provisional	99.74
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.74
PRK09242	257	tropinone reductase; Provisional	99.74
PRK07831	262	short chain dehydrogenase; Provisional	99.73
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.73
PRK06172	253	short chain dehydrogenase; Provisional	99.73
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.73
PRK05717	255	oxidoreductase; Validated	99.73
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.73
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.73
PRK06128	300	oxidoreductase; Provisional	99.73
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.73
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.73
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.73
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.73
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.73
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.72
PRK08643	256	acetoin reductase; Validated	99.72
PRK07035	252	short chain dehydrogenase; Provisional	99.72
PRK07814	263	short chain dehydrogenase; Provisional	99.72
PRK06196	315	oxidoreductase; Provisional	99.72
PRK07825	273	short chain dehydrogenase; Provisional	99.72
PRK07774	250	short chain dehydrogenase; Provisional	99.72
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.72
PRK08628	258	short chain dehydrogenase; Provisional	99.72
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.72
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.72
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.71
PRK08278	273	short chain dehydrogenase; Provisional	99.71
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.71
PRK07024	257	short chain dehydrogenase; Provisional	99.71
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK07677	252	short chain dehydrogenase; Provisional	99.71
PRK06138	252	short chain dehydrogenase; Provisional	99.71
PRK07576	264	short chain dehydrogenase; Provisional	99.71
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.7
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.7
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.7
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.7
PRK12939	250	short chain dehydrogenase; Provisional	99.7
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.7
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK05875	276	short chain dehydrogenase; Provisional	99.69
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.69
PRK06701	290	short chain dehydrogenase; Provisional	99.69
PRK07856	252	short chain dehydrogenase; Provisional	99.69
PRK12937	245	short chain dehydrogenase; Provisional	99.69
PRK07454	241	short chain dehydrogenase; Provisional	99.69
PRK07067	257	sorbitol dehydrogenase; Provisional	99.69
PRK08226	263	short chain dehydrogenase; Provisional	99.69
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.69
PRK06398	258	aldose dehydrogenase; Validated	99.69
PRK06914	280	short chain dehydrogenase; Provisional	99.68
PRK06484	520	short chain dehydrogenase; Validated	99.68
PRK07904	253	short chain dehydrogenase; Provisional	99.68
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.68
PRK06949	258	short chain dehydrogenase; Provisional	99.68
PRK09134	258	short chain dehydrogenase; Provisional	99.68
PRK12743	256	oxidoreductase; Provisional	99.67
PRK09072	263	short chain dehydrogenase; Provisional	99.67
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.67
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK07985	294	oxidoreductase; Provisional	99.67
PRK05855	582	short chain dehydrogenase; Validated	99.67
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK06182	273	short chain dehydrogenase; Validated	99.67
PRK06179	270	short chain dehydrogenase; Provisional	99.67
PRK06500	249	short chain dehydrogenase; Provisional	99.67
PRK12747	252	short chain dehydrogenase; Provisional	99.67
PRK09135	249	pteridine reductase; Provisional	99.67
PLN02780	320	ketoreductase/ oxidoreductase	99.67
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.67
PRK05650	270	short chain dehydrogenase; Provisional	99.67
PRK07832	272	short chain dehydrogenase; Provisional	99.66
PRK06484	520	short chain dehydrogenase; Validated	99.66
PRK06940	275	short chain dehydrogenase; Provisional	99.66
PRK06180	277	short chain dehydrogenase; Provisional	99.66
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.66
PRK06483	236	dihydromonapterin reductase; Provisional	99.66
PRK12744	257	short chain dehydrogenase; Provisional	99.66
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.66
PRK06125	259	short chain dehydrogenase; Provisional	99.66
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.65
PRK07806	248	short chain dehydrogenase; Provisional	99.65
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.65
PRK05993	277	short chain dehydrogenase; Provisional	99.65
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.65
PRK06841	255	short chain dehydrogenase; Provisional	99.65
PRK08267	260	short chain dehydrogenase; Provisional	99.65
PRK06057	255	short chain dehydrogenase; Provisional	99.65
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.65
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.65
PRK12828	239	short chain dehydrogenase; Provisional	99.65
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.65
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.65
PRK07201	657	short chain dehydrogenase; Provisional	99.65
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.65
PRK07775	274	short chain dehydrogenase; Provisional	99.65
PRK06123	248	short chain dehydrogenase; Provisional	99.65
PRK06523	260	short chain dehydrogenase; Provisional	99.64
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.64
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.64
PLN00015	308	protochlorophyllide reductase	99.64
PRK06198	260	short chain dehydrogenase; Provisional	99.64
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.64
PRK07069	251	short chain dehydrogenase; Validated	99.64
COG1028	251	FabG Dehydrogenases with different specificities (	99.64
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.64
PRK06181	263	short chain dehydrogenase; Provisional	99.64
PRK08263	275	short chain dehydrogenase; Provisional	99.64
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.64
PRK07326	237	short chain dehydrogenase; Provisional	99.64
PRK08703	239	short chain dehydrogenase; Provisional	99.63
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.63
PRK12746	254	short chain dehydrogenase; Provisional	99.63
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.63
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
PRK07074	257	short chain dehydrogenase; Provisional	99.63
PRK05693	274	short chain dehydrogenase; Provisional	99.62
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
PRK12829	264	short chain dehydrogenase; Provisional	99.62
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.61
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.61
PRK06482	276	short chain dehydrogenase; Provisional	99.61
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.61
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
PRK10538	248	malonic semialdehyde reductase; Provisional	99.6
PRK12827	249	short chain dehydrogenase; Provisional	99.59
PRK07102	243	short chain dehydrogenase; Provisional	99.59
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.59
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.59
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.58
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.58
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.58
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
PRK08324	681	short chain dehydrogenase; Validated	99.57
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.57
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.56
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.55
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.52
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.52
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.51
PRK09291	257	short chain dehydrogenase; Provisional	99.51
PRK12742	237	oxidoreductase; Provisional	99.5
PRK07060	245	short chain dehydrogenase; Provisional	99.5
PRK12367	245	short chain dehydrogenase; Provisional	99.49
PRK06101	240	short chain dehydrogenase; Provisional	99.49
PRK08177	225	short chain dehydrogenase; Provisional	99.49
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.48
PRK05884	223	short chain dehydrogenase; Provisional	99.48
PRK08264	238	short chain dehydrogenase; Validated	99.48
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.48
PRK07023	243	short chain dehydrogenase; Provisional	99.47
PRK07041	230	short chain dehydrogenase; Provisional	99.47
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.47
PRK06924	251	short chain dehydrogenase; Provisional	99.46
PRK07577	234	short chain dehydrogenase; Provisional	99.46
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.45
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.44
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.43
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.43
PRK08017	256	oxidoreductase; Provisional	99.43
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.42
PLN03209	576	translocon at the inner envelope of chloroplast su	99.4
PRK06953	222	short chain dehydrogenase; Provisional	99.39
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.38
PRK08219	227	short chain dehydrogenase; Provisional	99.37
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.36
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.36
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.35
PLN02240	352	UDP-glucose 4-epimerase	99.32
PRK07578	199	short chain dehydrogenase; Provisional	99.32
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.31
PLN02653	340	GDP-mannose 4,6-dehydratase	99.3
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.3
PRK08309	177	short chain dehydrogenase; Provisional	99.29
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.29
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.29
PLN02572	442	UDP-sulfoquinovose synthase	99.27
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.26
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.24
PLN02650	351	dihydroflavonol-4-reductase	99.2
PLN02214	342	cinnamoyl-CoA reductase	99.2
PLN00198	338	anthocyanidin reductase; Provisional	99.2
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.19
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.18
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.17
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.13
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.12
PLN02686	367	cinnamoyl-CoA reductase	99.11
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.11
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.07
PLN02427	386	UDP-apiose/xylose synthase	99.07
PLN02583	297	cinnamoyl-CoA reductase	99.04
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.04
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.04
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	99.02
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.02
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.99
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.99
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.98
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.97
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.92
CHL00194	317	ycf39 Ycf39; Provisional	98.91
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.91
PLN02260	668	probable rhamnose biosynthetic enzyme	98.83
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.83
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.82
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.81
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.79
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.79
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.76
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.76
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.76
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.75
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.74
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	98.74
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.73
PRK05865	854	hypothetical protein; Provisional	98.68
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.66
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.64
PLN02206	442	UDP-glucuronate decarboxylase	98.61
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.61
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.59
PRK07201	657	short chain dehydrogenase; Provisional	98.58
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.57
PLN02996	491	fatty acyl-CoA reductase	98.56
PLN02778	298	3,5-epimerase/4-reductase	98.52
PLN02503	605	fatty acyl-CoA reductase 2	98.5
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.49
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.49
PRK12320	699	hypothetical protein; Provisional	98.46
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.46
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.43
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.43
PRK09620	229	hypothetical protein; Provisional	98.42
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.41
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.4
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.39
PLN00016	378	RNA-binding protein; Provisional	98.34
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.32
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.29
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.29
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.23
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	98.19
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.17
PLN02260	668	probable rhamnose biosynthetic enzyme	98.16
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.15
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.15
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.13
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.09
PRK14982	340	acyl-ACP reductase; Provisional	98.07
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.04
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.03
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.98
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.91
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	97.89
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.86
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	97.83
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.79
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	97.79
PRK06849	389	hypothetical protein; Provisional	97.77
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.71
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.7
COG2910	211	Putative NADH-flavin reductase [General function p	97.68
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.55
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.54
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.53
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.44
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.43
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.42
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.39
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.39
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.39
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.38
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.37
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.37
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.36
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.34
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.33
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.33
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.33
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.33
COG3268	382	Uncharacterized conserved protein [Function unknow	97.32
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.32
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.32
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.28
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.27
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.26
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.24
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.24
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.2
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.17
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.16
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.16
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.15
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.14
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.12
PTZ00325	321	malate dehydrogenase; Provisional	97.11
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.08
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.08
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.08
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.06
PLN00106	323	malate dehydrogenase	97.01
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.01
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.98
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.98
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.95
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.94
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.94
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.93
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.93
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.92
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.91
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.91
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.91
PRK09496	453	trkA potassium transporter peripheral membrane com	96.88
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.88
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.88
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	96.86
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.83
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.83
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.78
PLN00203	519	glutamyl-tRNA reductase	96.78
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.78
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	96.77
PRK08223	287	hypothetical protein; Validated	96.75
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.75
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.73
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.72
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.72
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.71
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.68
PRK08328	231	hypothetical protein; Provisional	96.68
PRK05086	312	malate dehydrogenase; Provisional	96.67
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.65
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.64
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.63
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.61
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.61
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.6
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	96.52
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.51
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.5
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.5
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.44
PRK08655	437	prephenate dehydrogenase; Provisional	96.43
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.42
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.42
PRK04148	134	hypothetical protein; Provisional	96.41
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	96.39
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.39
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.36
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.33
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.31
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.31
PLN02740	381	Alcohol dehydrogenase-like	96.29
PRK09496	453	trkA potassium transporter peripheral membrane com	96.28
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.27
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.25
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.25
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.23
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.21
PRK14851	679	hypothetical protein; Provisional	96.2
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.19
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.18
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.17
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.17
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	96.16
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.14
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.14
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.13
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.13
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.11
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.11
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.1
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.08
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.07
PTZ00354	334	alcohol dehydrogenase; Provisional	96.06
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.04
PTZ00117	319	malate dehydrogenase; Provisional	95.98
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.98
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.98
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.98
PLN02827	378	Alcohol dehydrogenase-like	95.97
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.97
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.97
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.96
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.94
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.92
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.91
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.89
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.87
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.87
PRK07877	722	hypothetical protein; Provisional	95.86
PRK13771	334	putative alcohol dehydrogenase; Provisional	95.85
PRK13243	333	glyoxylate reductase; Reviewed	95.82
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.8
PRK07411	390	hypothetical protein; Validated	95.79
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.79
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.79
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.76
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.76
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.75
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.75
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.74
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.72
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.71
PRK12480	330	D-lactate dehydrogenase; Provisional	95.7
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.7
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.69
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.68
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	95.66
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.66
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	95.63
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.6
PRK14852	989	hypothetical protein; Provisional	95.58
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	95.57
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.55
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.54
PLN02602	350	lactate dehydrogenase	95.53
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.52
PRK06487	317	glycerate dehydrogenase; Provisional	95.5
PLN03139	386	formate dehydrogenase; Provisional	95.49
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.49
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.48
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	95.47
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.43
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.42
PRK06223	307	malate dehydrogenase; Reviewed	95.42
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.42
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.4
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.4
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	95.4
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.38
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	95.36
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.35
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.32
PRK14968	188	putative methyltransferase; Provisional	95.28
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.27
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.26
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.2
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.18
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	95.18
PLN02494	477	adenosylhomocysteinase	95.17
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.16
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.14
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.13
PF03808	172	Glyco_tran_WecB: Glycosyl transferase WecB/TagA/Cp	95.13
PLN02928	347	oxidoreductase family protein	95.13
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	95.11

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.87  E-value=1.7e-21  Score=151.80  Aligned_cols=96  Identities=31%  Similarity=0.423  Sum_probs=88.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+.+|+++||||++|||.++|+.|++.|++++++.|....++...+++.+.....+++++++||+|.++++++++.+.+
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            44789999999999999999999999999999999999999999888888876653599999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      +||++|+||||||+..
T Consensus        88 ~fg~vDvLVNNAG~~~  103 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISL  103 (282)
T ss_pred             hcCCCCEEEecCcccc
Confidence            9999999999999875

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.86  E-value=5.2e-21  Score=148.00  Aligned_cols=94  Identities=23%  Similarity=0.357  Sum_probs=88.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ++.+++++||||++|||+++|+.|+++|++|+++.|+.++++++.++++...+. .+.++.+|++++++++++.+++.+.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v-~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGV-EVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCc-eEEEEECcCCChhHHHHHHHHHHhc
Confidence            467899999999999999999999999999999999999999999999988754 7999999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      .+.||+||||||+..
T Consensus        82 ~~~IdvLVNNAG~g~   96 (265)
T COG0300          82 GGPIDVLVNNAGFGT   96 (265)
T ss_pred             CCcccEEEECCCcCC
Confidence            999999999999875

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.86  E-value=5.7e-21  Score=144.66  Aligned_cols=91  Identities=25%  Similarity=0.371  Sum_probs=84.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++||||++|||.++|+.|++.|++|++++|+.+.++++..++.+    ..+..+.+||+|.++++.+++.+.++|
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~~   79 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEEF   79 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence            5679999999999999999999999999999999999999888888754    258899999999999999999999999


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      |+||+||||||+...
T Consensus        80 g~iDiLvNNAGl~~g   94 (246)
T COG4221          80 GRIDILVNNAGLALG   94 (246)
T ss_pred             CcccEEEecCCCCcC
Confidence            999999999998753

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.83  E-value=7.5e-20  Score=142.01  Aligned_cols=96  Identities=26%  Similarity=0.386  Sum_probs=88.7

Q ss_pred             CCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        74 ~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +..+..|+++|||||++|||+++|.+|+++|+++++.|.+.+..++..+++.+. +  +++.+.||++|.+++.++.+++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g--~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G--EAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C--ceeEEEecCCCHHHHHHHHHHH
Confidence            334588999999999999999999999999999999999999999999988876 3  6999999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCCC
Q 030706          154 QKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~~  172 (173)
                      ++++|.+|+||||||+...
T Consensus       109 k~e~G~V~ILVNNAGI~~~  127 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVTG  127 (300)
T ss_pred             HHhcCCceEEEeccccccC
Confidence            9999999999999999864

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.83  E-value=1e-19  Score=144.89  Aligned_cols=101  Identities=22%  Similarity=0.303  Sum_probs=92.5

Q ss_pred             CCCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        73 ~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .....+.+++++|||+++|||+++|+.|+.+|++|++.+|+.+..++..+++.......++.++++|+++.++|.++.++
T Consensus        28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~  107 (314)
T KOG1208|consen   28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE  107 (314)
T ss_pred             eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence            34455788999999999999999999999999999999999999999999998866666899999999999999999999


Q ss_pred             HHHhcCCccEEEEcccCCCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHSSS  173 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~~s  173 (173)
                      +++.++++|+||||||+..++
T Consensus       108 ~~~~~~~ldvLInNAGV~~~~  128 (314)
T KOG1208|consen  108 FKKKEGPLDVLINNAGVMAPP  128 (314)
T ss_pred             HHhcCCCccEEEeCcccccCC
Confidence            999999999999999998753

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2e-19  Score=143.59  Aligned_cols=96  Identities=22%  Similarity=0.319  Sum_probs=86.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++....++.++.++.+|++|.++++++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999988888888887655444688999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .++++|+||||||+..
T Consensus        90 ~~~~iD~li~nAG~~~  105 (313)
T PRK05854         90 EGRPIHLLINNAGVMT  105 (313)
T ss_pred             hCCCccEEEECCcccc
Confidence            9999999999999864

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.81  E-value=1.8e-19  Score=132.89  Aligned_cols=90  Identities=31%  Similarity=0.554  Sum_probs=81.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.|.++|||||++|||++++++|.+.|.+|++++|+++.+++..++.    +  .++...||+.|.++.+++++.++++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p--~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----P--EIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----c--chheeeecccchhhHHHHHHHHHhh
Confidence            367899999999999999999999999999999999998887766543    2  4778899999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      |..+++||||||+..+
T Consensus        76 ~P~lNvliNNAGIqr~   91 (245)
T COG3967          76 YPNLNVLINNAGIQRN   91 (245)
T ss_pred             CCchheeeecccccch
Confidence            9999999999999864

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.80  E-value=1e-18  Score=136.84  Aligned_cols=97  Identities=34%  Similarity=0.403  Sum_probs=87.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..+.||+++|||+++|||+++|+.|++.|++|++++|+.+..++...++..... ..++..+.||+++++++++++++..
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            458999999999999999999999999999999999999998888887765432 3479999999999999999999999


Q ss_pred             Hh-cCCccEEEEcccCCCC
Q 030706          155 KN-LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~-~g~id~lVn~AG~~~~  172 (173)
                      ++ +|+||+||||||....
T Consensus        84 ~~~~GkidiLvnnag~~~~  102 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGL  102 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCC
Confidence            98 7999999999998763

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.7e-18  Score=134.50  Aligned_cols=95  Identities=33%  Similarity=0.492  Sum_probs=85.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++...++..++.++.+|++|.++++++++++.+.
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999999998888877777766544447888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        85 ~g~id~li~~Ag~~~   99 (265)
T PRK07062         85 FGGVDMLVNNAGQGR   99 (265)
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999854

>PRK06720 hypothetical protein; Provisional

Probab=99.78  E-value=6e-18  Score=123.99  Aligned_cols=93  Identities=18%  Similarity=0.253  Sum_probs=82.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||++|||+++++.|++.|++|++++++.+..++..+++... +. ++.++.+|+++.++++++++++.+.
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL-GG-EALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999887776666666533 32 4778899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|++|||||+..
T Consensus        91 ~G~iDilVnnAG~~~  105 (169)
T PRK06720         91 FSRIDMLFQNAGLYK  105 (169)
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999875

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.5e-18  Score=132.54  Aligned_cols=93  Identities=26%  Similarity=0.358  Sum_probs=81.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++....+. ++.++.+|++|+++++++++++. +
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNV-DVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEecCCCHHHHHHHHHHHH-h
Confidence            378999999999999999999999999999999999988877777776554332 68889999999999999999985 6


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        83 ~g~iD~lv~nag~~~   97 (263)
T PRK08339         83 IGEPDIFFFSTGGPK   97 (263)
T ss_pred             hCCCcEEEECCCCCC
Confidence            899999999999753

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.3e-18  Score=131.45  Aligned_cols=94  Identities=26%  Similarity=0.397  Sum_probs=83.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++.......++.++.+|++|+++++++++++.+.+
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999999999988888777777653223368899999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        85 g~id~li~~ag~~~   98 (260)
T PRK07063         85 GPLDVLVNNAGINV   98 (260)
T ss_pred             CCCcEEEECCCcCC
Confidence            99999999999753

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.9e-18  Score=131.24  Aligned_cols=93  Identities=29%  Similarity=0.346  Sum_probs=83.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||++|||++++++|+++|++|++++|+++..++..+++.....  ++.++.+|++|+++++++++++.++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGG--EAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999998888777777665432  5888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        81 ~~~id~li~~ag~~~   95 (254)
T PRK07478         81 FGGLDIAFNNAGTLG   95 (254)
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999853

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=2.4e-18  Score=133.24  Aligned_cols=91  Identities=18%  Similarity=0.291  Sum_probs=77.0

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        76 ~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .++++|+++||||+  +|||++++++|+++|++|++++|+. ..++..+++.   . .++.++++|++|+++++++++++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV---D-EEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc---c-CceeEEeCCCCCHHHHHHHHHHH
Confidence            34789999999999  8999999999999999999999973 3333333332   2 25788999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+++|++|+||||||+..
T Consensus        78 ~~~~g~iD~lv~nAg~~~   95 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAK   95 (252)
T ss_pred             HHHhCCCCEEEEcccccc
Confidence            999999999999999864

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.78  E-value=6e-18  Score=134.42  Aligned_cols=96  Identities=16%  Similarity=0.228  Sum_probs=84.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++....+..++.++.+|++|.++++++++++.+
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            34788999999999999999999999999999999999887777666666543334688899999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .++++|+||||||+..
T Consensus        92 ~~~~iD~li~nAg~~~  107 (306)
T PRK06197         92 AYPRIDLLINNAGVMY  107 (306)
T ss_pred             hCCCCCEEEECCcccc
Confidence            9999999999999754

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.9e-18  Score=129.89  Aligned_cols=92  Identities=13%  Similarity=0.208  Sum_probs=82.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.....  ++..+.+|++|+++++++++++.+.
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTD--NVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--CeEEEEccCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999888887777765432  4778899999999999999999999


Q ss_pred             cC-CccEEEEcccCC
Q 030706          157 LK-YVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g-~id~lVn~AG~~  170 (173)
                      +| +||+||||||..
T Consensus        80 ~g~~iD~li~nag~~   94 (227)
T PRK08862         80 FNRAPDVLVNNWTSS   94 (227)
T ss_pred             hCCCCCEEEECCccC
Confidence            98 999999999854

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.78  E-value=1.7e-18  Score=129.54  Aligned_cols=95  Identities=25%  Similarity=0.330  Sum_probs=84.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.||++++||+.||||++++++|++.|..+.+++.+.+. .+..++|++..+..++.|++|||++..++++.++++.+.
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999887777766665 345667777777789999999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      ||.||++||+||+.-.
T Consensus        81 fg~iDIlINgAGi~~d   96 (261)
T KOG4169|consen   81 FGTIDILINGAGILDD   96 (261)
T ss_pred             hCceEEEEcccccccc
Confidence            9999999999999743

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.78  E-value=6.4e-18  Score=130.59  Aligned_cols=93  Identities=26%  Similarity=0.372  Sum_probs=83.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++....  .++.++.+|++|+++++++++++.+.
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999888777777766543  25888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        84 ~g~id~lv~~ag~~~   98 (253)
T PRK05867         84 LGGIDIAVCNAGIIT   98 (253)
T ss_pred             hCCCCEEEECCCCCC
Confidence            999999999999864

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.6e-18  Score=132.51  Aligned_cols=92  Identities=33%  Similarity=0.469  Sum_probs=82.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... + .++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-G-FDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999988877777776543 2 258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        82 g~id~li~nAg~~~   95 (275)
T PRK05876         82 GHVDVVFSNAGIVV   95 (275)
T ss_pred             CCCCEEEECCCcCC
Confidence            99999999999854

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=5e-18  Score=132.96  Aligned_cols=93  Identities=19%  Similarity=0.290  Sum_probs=76.8

Q ss_pred             CCCCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        76 ~~~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .++++|++|||||++  |||+++|+.|+++|++|++++|+....+. .+++....+.  ..++++|++|.++++++++++
T Consensus         3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~--~~~~~~Dv~d~~~v~~~~~~~   79 (271)
T PRK06505          3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS--DFVLPCDVEDIASVDAVFEAL   79 (271)
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC--ceEEeCCCCCHHHHHHHHHHH
Confidence            457899999999996  99999999999999999999987543322 3444333232  356899999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+++|++|+||||||+..
T Consensus        80 ~~~~g~iD~lVnnAG~~~   97 (271)
T PRK06505         80 EKKWGKLDFVVHAIGFSD   97 (271)
T ss_pred             HHHhCCCCEEEECCccCC
Confidence            999999999999999864

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.77  E-value=8e-18  Score=135.40  Aligned_cols=93  Identities=26%  Similarity=0.378  Sum_probs=83.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.....  ++.++.+|++|.++++++++++.+.
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~--~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGA--EVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999999888888777765422  5888899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|++|||||+..
T Consensus        82 ~g~iD~lVnnAG~~~   96 (330)
T PRK06139         82 GGRIDVWVNNVGVGA   96 (330)
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999754

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.2e-17  Score=132.24  Aligned_cols=95  Identities=27%  Similarity=0.404  Sum_probs=84.1

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..++.+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.....  ++.++.+|++|.++++++++++.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~  112 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGG--DAMAVPCDLSDLDAVDALVADVE  112 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHH
Confidence            4557889999999999999999999999999999999998887777776654322  57889999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus       113 ~~~g~id~li~~AG~~~  129 (293)
T PRK05866        113 KRIGGVDILINNAGRSI  129 (293)
T ss_pred             HHcCCCCEEEECCCCCC
Confidence            99999999999999864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.77  E-value=7.9e-18  Score=130.71  Aligned_cols=93  Identities=19%  Similarity=0.355  Sum_probs=80.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+++|+++||||++|||+++++.|++.|++|+++++ +.+..+...+++....+. ++.++.+|++|+++++++++++.+
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGI-KAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            378999999999999999999999999999998875 455566666666544333 688999999999999999999999


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                      .+|++|+||||||+.
T Consensus        84 ~~g~id~lv~nAg~~   98 (260)
T PRK08416         84 DFDRVDFFISNAIIS   98 (260)
T ss_pred             hcCCccEEEECcccc
Confidence            999999999999875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=8.8e-18  Score=130.51  Aligned_cols=93  Identities=17%  Similarity=0.185  Sum_probs=76.5

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        76 ~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ..+++|++|||||+  +|||++++++|+++|++|++++|+.+.. +..+++.+..+  .+.++.+|++|+++++++++++
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEELD--APIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhhc--cceEEecCcCCHHHHHHHHHHH
Confidence            34789999999998  5999999999999999999999976432 22333433322  3567899999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.+|++|+||||||+..
T Consensus        83 ~~~~g~ld~lv~nAg~~~  100 (258)
T PRK07533         83 AEEWGRLDFLLHSIAFAP  100 (258)
T ss_pred             HHHcCCCCEEEEcCccCC
Confidence            999999999999999853

>PRK08589 short chain dehydrogenase; Validated

Probab=99.77  E-value=1e-17  Score=131.07  Aligned_cols=91  Identities=23%  Similarity=0.357  Sum_probs=81.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||++|||+++++.|+++|++|++++|+ +..++..+++.+. + .++.++.+|++|+++++++++++.+.+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-G-GKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-C-CeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999998 6666766666543 2 258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        81 g~id~li~~Ag~~~   94 (272)
T PRK08589         81 GRVDVLFNNAGVDN   94 (272)
T ss_pred             CCcCEEEECCCCCC
Confidence            99999999999864

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=6.8e-18  Score=131.70  Aligned_cols=91  Identities=20%  Similarity=0.339  Sum_probs=77.5

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +++|+++||||++  |||+++++.|+++|++|++++|+. ..++..+++....+  .+.++.+|++|+++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG--SDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccC--CceEeecCCCCHHHHHHHHHHHHh
Confidence            6789999999986  999999999999999999999873 44455556654433  356789999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        81 ~~g~iD~linnAg~~~   96 (262)
T PRK07984         81 VWPKFDGFVHSIGFAP   96 (262)
T ss_pred             hcCCCCEEEECCccCC
Confidence            9999999999999753

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.77  E-value=8.9e-18  Score=132.47  Aligned_cols=93  Identities=23%  Similarity=0.312  Sum_probs=80.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh---------hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVA  147 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~  147 (173)
                      ++++|++|||||++|||+++++.|++.|++|++++++.         +..++..+++... + .++.++.+|++|+++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-G-GEAVANGDDIADWDGAA   80 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-C-CceEEEeCCCCCHHHHH
Confidence            36789999999999999999999999999999998765         5566666666543 2 25788899999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccCCC
Q 030706          148 DLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       148 ~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++++++.+.+|++|+||||||+..
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~  104 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILR  104 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCC
Confidence            999999999999999999999864

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.2e-17  Score=133.05  Aligned_cols=91  Identities=24%  Similarity=0.275  Sum_probs=77.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh----------hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----------ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEV  146 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v  146 (173)
                      .+++|+++||||++|||+++++.|++.|++|++++|+.          +..++..+++... +. ++.++.+|++|++++
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA-GG-RGIAVQVDHLVPEQV   82 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc-CC-ceEEEEcCCCCHHHH
Confidence            36799999999999999999999999999999999973          3344445555433 32 577899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcc-cC
Q 030706          147 ADLVAFAQKNLKYVDIWVFMS-DL  169 (173)
Q Consensus       147 ~~~~~~~~~~~g~id~lVn~A-G~  169 (173)
                      +++++++.+.+|+||+||||| |+
T Consensus        83 ~~~~~~~~~~~g~iDilVnnA~g~  106 (305)
T PRK08303         83 RALVERIDREQGRLDILVNDIWGG  106 (305)
T ss_pred             HHHHHHHHHHcCCccEEEECCccc
Confidence            999999999999999999999 85

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=1.2e-17  Score=130.07  Aligned_cols=91  Identities=22%  Similarity=0.336  Sum_probs=76.3

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +++|+++||||  ++|||+++|+.|+++|++|++++|+. ..++..+++....+.  ...+++|++|+++++++++++.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS--ELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC--ceEEECCCCCHHHHHHHHHHHHH
Confidence            67899999997  67999999999999999999988763 334445555443332  45789999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      ++|++|+||||||+..
T Consensus        81 ~~g~iD~lVnnAG~~~   96 (261)
T PRK08690         81 HWDGLDGLVHSIGFAP   96 (261)
T ss_pred             HhCCCcEEEECCccCC
Confidence            9999999999999864

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=1.7e-17  Score=130.18  Aligned_cols=91  Identities=22%  Similarity=0.345  Sum_probs=75.9

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+|++|||||+  +|||+++++.|+++|++|++++|+.+ .++..+++....+. . .++++|++|.++++++++++.+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHHH
Confidence            578999999997  89999999999999999999999853 23334444433333 3 5689999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      ++|++|+||||||+..
T Consensus        80 ~~g~iDilVnnAG~~~   95 (274)
T PRK08415         80 DLGKIDFIVHSVAFAP   95 (274)
T ss_pred             HcCCCCEEEECCccCc
Confidence            9999999999999853

>PLN02253 xanthoxin dehydrogenase

Probab=99.75  E-value=2.9e-17  Score=128.66  Aligned_cols=93  Identities=29%  Similarity=0.394  Sum_probs=80.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+.+|+++||||++|||++++++|+++|++|++++++.+..++..+++.   ...++.++++|++|.++++++++++.+
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            34779999999999999999999999999999999998766665555542   123688999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        91 ~~g~id~li~~Ag~~~  106 (280)
T PLN02253         91 KFGTLDIMVNNAGLTG  106 (280)
T ss_pred             HhCCCCEEEECCCcCC
Confidence            9999999999999863

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.6e-17  Score=132.59  Aligned_cols=93  Identities=25%  Similarity=0.413  Sum_probs=83.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.  ++.++.+|++|+++++++++++.+.
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~--~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGG--EALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC--cEEEEEecCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999998888877777765432  5888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|++|||||+..
T Consensus        83 ~g~iD~lInnAg~~~   97 (334)
T PRK07109         83 LGPIDTWVNNAMVTV   97 (334)
T ss_pred             CCCCCEEEECCCcCC
Confidence            999999999999753

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=1.6e-17  Score=129.16  Aligned_cols=94  Identities=14%  Similarity=0.262  Sum_probs=76.1

Q ss_pred             CCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.+|+++||||+  +|||+++++.|+++|++|++++|+... ++..+++.+.....++.++++|++|+++++++++++.
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK   82 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            3678999999997  899999999999999999999875322 1222333332222368889999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +++|++|+||||||+..
T Consensus        83 ~~~g~ld~lv~nag~~~   99 (257)
T PRK08594         83 EEVGVIHGVAHCIAFAN   99 (257)
T ss_pred             HhCCCccEEEECcccCC
Confidence            99999999999999753

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.75  E-value=2.1e-17  Score=127.87  Aligned_cols=91  Identities=18%  Similarity=0.264  Sum_probs=77.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||++|||++++++|+++|++|++++|+..  ++..+++... + .++.++.+|++|+++++++++++.+.
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL-G-RKFHFITADLIQQKDIDSIVSQAVEV   80 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc-C-CeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999988642  2333334332 2 36888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        81 ~g~iD~lv~~ag~~~   95 (251)
T PRK12481         81 MGHIDILINNAGIIR   95 (251)
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999864

>PRK09186 flagellin modification protein A; Provisional

Probab=99.75  E-value=2.4e-17  Score=127.19  Aligned_cols=94  Identities=26%  Similarity=0.322  Sum_probs=82.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      |+++|+++||||++|||+++++.|+++|++|++++|+.+..++...++....+...+.++.+|++|+++++++++++.+.
T Consensus         1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998887777777654433335667799999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ++++|+||||||..
T Consensus        81 ~~~id~vi~~A~~~   94 (256)
T PRK09186         81 YGKIDGAVNCAYPR   94 (256)
T ss_pred             cCCccEEEECCccc
Confidence            99999999999753

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.1e-17  Score=129.96  Aligned_cols=92  Identities=20%  Similarity=0.277  Sum_probs=80.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++..   ..++..+.+|++|.++++++++++.+.
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998877766665532   235777889999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        83 ~g~id~vI~nAG~~~   97 (296)
T PRK05872         83 FGGIDVVVANAGIAS   97 (296)
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999853

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.4e-17  Score=127.28  Aligned_cols=89  Identities=25%  Similarity=0.289  Sum_probs=78.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..++..+++    + .++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----G-ERARFIATDITDDAAIERAVATVVARF   78 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999999999877665554443    2 268889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        79 g~id~lv~~ag~~~   92 (261)
T PRK08265         79 GRVDILVNLACTYL   92 (261)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999753

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=2.4e-17  Score=128.23  Aligned_cols=91  Identities=22%  Similarity=0.283  Sum_probs=76.2

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +++|+++||||++  |||+++++.|+++|++|++++|+. ..++..+++....+.  ..++++|++|+++++++++++.+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~--~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC--NFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC--ceEEEccCCCHHHHHHHHHHHHH
Confidence            6789999999997  999999999999999999999874 334445555444332  34678999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      ++|++|+||||||+..
T Consensus        83 ~~g~iDilVnnag~~~   98 (260)
T PRK06603         83 KWGSFDFLLHGMAFAD   98 (260)
T ss_pred             HcCCccEEEEccccCC
Confidence            9999999999999753

>PRK05599 hypothetical protein; Provisional

Probab=99.75  E-value=2.5e-17  Score=127.14  Aligned_cols=89  Identities=20%  Similarity=0.256  Sum_probs=79.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |+++||||++|||++++++|+ +|++|++++|+.+.+++..+++.+.++. .+.++.+|++|+++++++++++.+.+|++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGAT-SVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCC-ceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999 5999999999998888888887654332 57889999999999999999999999999


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |++|||||+..
T Consensus        79 d~lv~nag~~~   89 (246)
T PRK05599         79 SLAVVAFGILG   89 (246)
T ss_pred             CEEEEecCcCC
Confidence            99999999864

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.74  E-value=4.7e-17  Score=125.88  Aligned_cols=93  Identities=18%  Similarity=0.284  Sum_probs=80.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+ ..++..+++... + .++.++.+|++|+++++++++++.+
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-G-RRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999998754 345555666543 2 2578889999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        83 ~~g~id~li~~ag~~~   98 (254)
T PRK06114         83 ELGALTLAVNAAGIAN   98 (254)
T ss_pred             HcCCCCEEEECCCCCC
Confidence            9999999999999864

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=4.1e-17  Score=129.88  Aligned_cols=94  Identities=22%  Similarity=0.293  Sum_probs=80.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..+++|+++||||++|||++++++|+++|++|+++++.. +..++..+++... + .++.++.+|++|.++++++++++.
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-g-~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-G-AKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-C-CeEEEEeCCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998753 4455666666543 3 268899999999999999999999


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                      + +|++|+||||||+..+
T Consensus        86 ~-~g~iD~li~nAG~~~~  102 (306)
T PRK07792         86 G-LGGLDIVVNNAGITRD  102 (306)
T ss_pred             H-hCCCCEEEECCCCCCC
Confidence            8 9999999999998653

>PRK06194 hypothetical protein; Provisional

Probab=99.74  E-value=4.1e-17  Score=128.15  Aligned_cols=92  Identities=25%  Similarity=0.378  Sum_probs=81.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++... + .++.++.+|++|.++++++++++.+.+
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-G-AEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56799999999999999999999999999999999887777766666543 2 268889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        82 g~id~vi~~Ag~~~   95 (287)
T PRK06194         82 GAVHLLFNNAGVGA   95 (287)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999865

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5.6e-17  Score=124.72  Aligned_cols=92  Identities=23%  Similarity=0.411  Sum_probs=82.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++...++....++.++.++.+|++|+++++++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999998887777766665443447899999999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|++|||||+..
T Consensus        82 id~vi~~ag~~~   93 (248)
T PRK08251         82 LDRVIVNAGIGK   93 (248)
T ss_pred             CCEEEECCCcCC
Confidence            999999999864

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.74  E-value=4.7e-17  Score=125.71  Aligned_cols=92  Identities=26%  Similarity=0.380  Sum_probs=81.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||++|||++++++|+++|++|++++|+++..++...++....  .++.++.+|++|+++++++++++.+.+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLG--RRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhC--CceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999999877777666665432  258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||...
T Consensus        81 g~~d~vi~~ag~~~   94 (258)
T PRK07890         81 GRVDALVNNAFRVP   94 (258)
T ss_pred             CCccEEEECCccCC
Confidence            99999999999753

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.74  E-value=5.8e-17  Score=125.23  Aligned_cols=93  Identities=30%  Similarity=0.457  Sum_probs=82.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+..++..+++....  .++.++.+|++|+++++++++++.+.
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG--IKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999999887777777765432  25788899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        84 ~~~id~vi~~ag~~~   98 (254)
T PRK08085         84 IGPIDVLINNAGIQR   98 (254)
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999753

>PRK09242 tropinone reductase; Provisional

Probab=99.74  E-value=8.1e-17  Score=124.61  Aligned_cols=94  Identities=34%  Similarity=0.520  Sum_probs=84.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|+++|||+++|||+++++.|+++|++|++++|+.+..++..+++....+..++.++.+|++++++++++++++.+.
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999998887777777765543447889999999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ++++|+||||||+.
T Consensus        86 ~g~id~li~~ag~~   99 (257)
T PRK09242         86 WDGLHILVNNAGGN   99 (257)
T ss_pred             cCCCCEEEECCCCC
Confidence            99999999999974

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.1e-16  Score=124.24  Aligned_cols=96  Identities=29%  Similarity=0.407  Sum_probs=83.8

Q ss_pred             CCCCCCEEEEEcCCc-hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTK-GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..+.+|+++||||+| |||+++++.|+++|++|++++|+.+..++..+++....+..++.++++|++++++++++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            346789999999985 9999999999999999999999888777777777654443368889999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus        93 ~~~g~id~li~~ag~~~  109 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGG  109 (262)
T ss_pred             HHcCCCCEEEECCCCCC
Confidence            99999999999999753

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=4.2e-17  Score=127.80  Aligned_cols=91  Identities=20%  Similarity=0.337  Sum_probs=75.4

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+|++|||||+  +|||+++|+.|+++|++|++++|+.. ..+..+++.+..+.  ...+++|++|+++++++++++.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~--~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGA--FVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCC--ceEEecCCCCHHHHHHHHHHHHH
Confidence            678999999997  89999999999999999999988632 23334444433332  55689999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      ++|++|+||||||+..
T Consensus        85 ~~g~iD~lv~nAG~~~  100 (272)
T PRK08159         85 KWGKLDFVVHAIGFSD  100 (272)
T ss_pred             hcCCCcEEEECCcccC
Confidence            9999999999999863

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.73  E-value=4.3e-17  Score=118.14  Aligned_cols=89  Identities=31%  Similarity=0.456  Sum_probs=79.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC--hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS--AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      |+++||||++|||++++++|+++|+ .|++++|+  .+..++...++...+  .++.++++|++++++++++++++.+.+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG--AKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT--SEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence            6899999999999999999999965 78889998  566677777776443  479999999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        79 ~~ld~li~~ag~~~   92 (167)
T PF00106_consen   79 GPLDILINNAGIFS   92 (167)
T ss_dssp             SSESEEEEECSCTT
T ss_pred             cccccccccccccc
Confidence            99999999999876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.73  E-value=8.3e-17  Score=124.20  Aligned_cols=93  Identities=27%  Similarity=0.366  Sum_probs=82.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++... + .++.++.+|++|.++++++++++.+.
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA-G-GEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999988777777666543 2 25888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        82 ~g~id~li~~ag~~~   96 (253)
T PRK06172         82 YGRLDYAFNNAGIEI   96 (253)
T ss_pred             hCCCCEEEECCCCCC
Confidence            999999999999753

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.73  E-value=5.6e-17  Score=125.96  Aligned_cols=89  Identities=31%  Similarity=0.390  Sum_probs=78.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++    +. ++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~   77 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----GD-HVLVVEGDVTSYADNQRAVDQTVDA   77 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-cceEEEccCCCHHHHHHHHHHHHHh
Confidence            367899999999999999999999999999999999887665544433    22 5788899999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      +|++|+||||||+.
T Consensus        78 ~g~id~li~~ag~~   91 (263)
T PRK06200         78 FGKLDCFVGNAGIW   91 (263)
T ss_pred             cCCCCEEEECCCCc
Confidence            99999999999975

>PRK05717 oxidoreductase; Validated

Probab=99.73  E-value=6.2e-17  Score=125.19  Aligned_cols=92  Identities=25%  Similarity=0.365  Sum_probs=79.2

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..++++|+++||||++|||++++++|+++|++|++++++.+..++..+++    + .++.++.+|++|.++++++++++.
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~~~~~~~~~~   79 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----G-ENAWFIAMDVADEAQVAAGVAEVL   79 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----C-CceEEEEccCCCHHHHHHHHHHHH
Confidence            45588999999999999999999999999999999998876554443322    2 257889999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus        80 ~~~g~id~li~~ag~~~   96 (255)
T PRK05717         80 GQFGRLDALVCNAAIAD   96 (255)
T ss_pred             HHhCCCCEEEECCCccc
Confidence            99999999999999864

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.73  E-value=8.3e-17  Score=125.24  Aligned_cols=94  Identities=32%  Similarity=0.485  Sum_probs=83.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+.+... + .++.++.+|++|+++++++++++.+
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL-G-IEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3478899999999999999999999999999999999988777776666543 2 2588899999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .++++|+||||||+..
T Consensus        84 ~~~~id~li~~ag~~~   99 (265)
T PRK07097         84 EVGVIDILVNNAGIIK   99 (265)
T ss_pred             hCCCCCEEEECCCCCC
Confidence            9999999999999864

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.73  E-value=5.9e-17  Score=129.64  Aligned_cols=92  Identities=24%  Similarity=0.231  Sum_probs=80.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++...  ..++.++.+|++|.++++++++++.+.+
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            56899999999999999999999999999999999988777776666422  2358889999999999999999988877


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        82 ~~iD~li~nAg~~~   95 (322)
T PRK07453         82 KPLDALVCNAAVYM   95 (322)
T ss_pred             CCccEEEECCcccC
Confidence            89999999999753

>PRK06128 oxidoreductase; Provisional

Probab=99.73  E-value=3.1e-16  Score=124.40  Aligned_cols=92  Identities=28%  Similarity=0.342  Sum_probs=77.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.+|++|||||++|||+++++.|+++|++|++++++.+  ..++..+.+... +. ++.++.+|++|.++++++++++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GR-KAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-CC-eEEEEecCCCCHHHHHHHHHHHH
Confidence            478899999999999999999999999999999887543  334444444433 32 68889999999999999999999


Q ss_pred             HhcCCccEEEEcccCC
Q 030706          155 KNLKYVDIWVFMSDLH  170 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~  170 (173)
                      +.+|++|+||||||+.
T Consensus       130 ~~~g~iD~lV~nAg~~  145 (300)
T PRK06128        130 KELGGLDILVNIAGKQ  145 (300)
T ss_pred             HHhCCCCEEEECCccc
Confidence            9999999999999975

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.73  E-value=1.3e-16  Score=123.34  Aligned_cols=95  Identities=26%  Similarity=0.380  Sum_probs=83.9

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +..+++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|++++.++++++.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~   83 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-GG-AAEALAFDIADEEAVAAAFARID   83 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEccCCCHHHHHHHHHHHH
Confidence            44578999999999999999999999999999999999987777776666543 22 58889999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.++++|+||||||...
T Consensus        84 ~~~~~id~vi~~ag~~~  100 (256)
T PRK06124         84 AEHGRLDILVNNVGARD  100 (256)
T ss_pred             HhcCCCCEEEECCCCCC
Confidence            99999999999999754

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.73  E-value=3.4e-17  Score=120.09  Aligned_cols=93  Identities=22%  Similarity=0.298  Sum_probs=82.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ++..|+++||||++|||++++..|++.|++|++.+++....++....|...   .+...+.|||++.++++..+++..+.
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHHHHHHHHHHHh
Confidence            367799999999999999999999999999999999888777777666432   24567899999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|++++||||||++.+
T Consensus        88 ~g~psvlVncAGItrD  103 (256)
T KOG1200|consen   88 LGTPSVLVNCAGITRD  103 (256)
T ss_pred             cCCCcEEEEcCccccc
Confidence            9999999999999865

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.73  E-value=6.2e-17  Score=125.82  Aligned_cols=92  Identities=22%  Similarity=0.346  Sum_probs=76.5

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChh--hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           78 LPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        78 ~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +.+|+++||||+  +|||++++++|+++|++|++++++.+  ..++..+++.+...  ++.++.+|++|+++++++++++
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN--PSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccC--cceEeecCcCCHHHHHHHHHHH
Confidence            678999999986  89999999999999999998876543  33444555544322  4678899999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+++|++|+||||||+..
T Consensus        82 ~~~~g~iD~lv~nag~~~   99 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAG   99 (258)
T ss_pred             HHHcCCCCEEEEcccccC
Confidence            999999999999999863

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.73  E-value=1.1e-16  Score=123.68  Aligned_cols=92  Identities=29%  Similarity=0.469  Sum_probs=82.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||++|||++++++|+++|++|++++|+++..++..+.+... + .++.++.+|++|+++++++++++.+.+
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-G-LSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-ceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            67999999999999999999999999999999999988777766666543 2 258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||...
T Consensus        86 ~~~d~li~~ag~~~   99 (255)
T PRK07523         86 GPIDILVNNAGMQF   99 (255)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.73  E-value=9.5e-17  Score=125.63  Aligned_cols=92  Identities=24%  Similarity=0.311  Sum_probs=82.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++... +. ++.++++|++|+++++++++++.+.
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GG-EALAVKADVLDKESLEQARQQILED   84 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999987777777766543 22 6889999999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ++++|+||||||+.
T Consensus        85 ~g~id~li~~ag~~   98 (278)
T PRK08277         85 FGPCDILINGAGGN   98 (278)
T ss_pred             cCCCCEEEECCCCC
Confidence            99999999999965

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=6e-17  Score=125.73  Aligned_cols=89  Identities=17%  Similarity=0.227  Sum_probs=74.7

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           78 LPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        78 ~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +.+|+++|||+  ++|||+++++.|+++|++|++++|+.  +..++    +....+. ++.++.+|++|+++++++++++
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~----~~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~   79 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTER----IAKRLPE-PAPVLELDVTNEEHLASLADRV   79 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHH----HHHhcCC-CCcEEeCCCCCHHHHHHHHHHH
Confidence            67899999999  89999999999999999999999764  22233    2222222 4678899999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.+|++|+||||||+..
T Consensus        80 ~~~~g~iD~li~nAG~~~   97 (256)
T PRK07889         80 REHVDGLDGVVHSIGFAP   97 (256)
T ss_pred             HHHcCCCcEEEEcccccc
Confidence            999999999999999863

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.72  E-value=8.7e-17  Score=124.91  Aligned_cols=88  Identities=24%  Similarity=0.351  Sum_probs=76.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||++|||+++++.|+++|++|++++|+.+..++...    ..+. ++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----AHGD-AVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hcCC-ceEEEEeccCCHHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999999998766554332    2232 58889999999999999999999999


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      |++|+||||||+.
T Consensus        78 g~id~li~~Ag~~   90 (262)
T TIGR03325        78 GKIDCLIPNAGIW   90 (262)
T ss_pred             CCCCEEEECCCCC
Confidence            9999999999975

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08643 acetoin reductase; Validated

Probab=99.72  E-value=1.1e-16  Score=123.79  Aligned_cols=90  Identities=26%  Similarity=0.391  Sum_probs=80.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|+++||||++|||+++++.|+++|++|++++|+.+..++...++... + .++.++++|++|+++++++++++.+.+++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-G-GKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999987777776666543 2 25888999999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||+..
T Consensus        80 id~vi~~ag~~~   91 (256)
T PRK08643         80 LNVVVNNAGVAP   91 (256)
T ss_pred             CCEEEECCCCCC
Confidence            999999999854

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.3e-16  Score=123.07  Aligned_cols=92  Identities=25%  Similarity=0.368  Sum_probs=82.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++.....  ++.++++|+++.++++++++++.+.
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGG--KAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47789999999999999999999999999999999998877777777654322  5788899999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ++++|+||||||..
T Consensus        83 ~~~id~li~~ag~~   96 (252)
T PRK07035         83 HGRLDILVNNAAAN   96 (252)
T ss_pred             cCCCCEEEECCCcC
Confidence            99999999999964

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.4e-16  Score=123.89  Aligned_cols=92  Identities=25%  Similarity=0.382  Sum_probs=81.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++... + .++.++.+|++++++++++++++.+.+
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA-G-RRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999987777766666543 2 258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||...
T Consensus        86 ~~id~vi~~Ag~~~   99 (263)
T PRK07814         86 GRLDIVVNNVGGTM   99 (263)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999753

>PRK06196 oxidoreductase; Provisional

Probab=99.72  E-value=9.2e-17  Score=128.21  Aligned_cols=89  Identities=18%  Similarity=0.259  Sum_probs=78.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++.      .+.++.+|++|.++++++++++.+.
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999877666555542      2678899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        97 ~~~iD~li~nAg~~~  111 (315)
T PRK06196         97 GRRIDILINNAGVMA  111 (315)
T ss_pred             CCCCCEEEECCCCCC
Confidence            999999999999753

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.1e-16  Score=125.02  Aligned_cols=88  Identities=25%  Similarity=0.309  Sum_probs=78.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++++++||||+||||+++++.|+++|++|++++|+++..++...++.      ++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEADL   76 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHHHc
Confidence            568999999999999999999999999999999998877666544432      36788999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        77 ~~id~li~~ag~~~   90 (273)
T PRK07825         77 GPIDVLVNNAGVMP   90 (273)
T ss_pred             CCCCEEEECCCcCC
Confidence            99999999999864

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.7e-16  Score=122.08  Aligned_cols=93  Identities=18%  Similarity=0.309  Sum_probs=80.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||+||||.+++++|+++|++|++++|+.+..++..+++... + .++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-G-GTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999877666666655443 2 24778899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        81 ~~~id~vi~~ag~~~   95 (250)
T PRK07774         81 FGGIDYLVNNAAIYG   95 (250)
T ss_pred             hCCCCEEEECCCCcC
Confidence            999999999999853

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.72  E-value=1.7e-16  Score=122.98  Aligned_cols=92  Identities=23%  Similarity=0.319  Sum_probs=79.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||++++++|+++|++|++++|+ +..++..+.+... + .++.++.+|+++.++++++++++.+.
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-G-RKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999997 4455554444433 2 25888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|++|||||...
T Consensus        89 ~g~id~li~~ag~~~  103 (258)
T PRK06935         89 FGKIDILVNNAGTIR  103 (258)
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999754

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.5e-16  Score=123.12  Aligned_cols=93  Identities=22%  Similarity=0.228  Sum_probs=80.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.. +..+++.....  ++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQP--RAEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999987665 55555544322  588999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .++++|+||||||...
T Consensus        80 ~~~~id~vi~~ag~~~   95 (258)
T PRK08628         80 KFGRIDGLVNNAGVND   95 (258)
T ss_pred             hcCCCCEEEECCcccC
Confidence            9999999999999753

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.72  E-value=2.1e-16  Score=122.34  Aligned_cols=92  Identities=18%  Similarity=0.325  Sum_probs=81.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|++|||||+++||.+++++|+++|++|++++|+....++..+++....+..++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999988777776666655443236889999999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|++|||||...
T Consensus        82 id~vv~~ag~~~   93 (259)
T PRK12384         82 VDLLVYNAGIAK   93 (259)
T ss_pred             CCEEEECCCcCC
Confidence            999999999764

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.72  E-value=1.1e-16  Score=127.89  Aligned_cols=91  Identities=22%  Similarity=0.242  Sum_probs=79.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .+|+++||||++|||+++++.|+++| ++|++++|+.+..++..+++...  ..++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP--KDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            37899999999999999999999999 99999999988777666665422  2357888999999999999999998889


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        80 ~~iD~lI~nAG~~~   93 (314)
T TIGR01289        80 RPLDALVCNAAVYF   93 (314)
T ss_pred             CCCCEEEECCCccc
Confidence            99999999999853

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.71  E-value=1.7e-16  Score=122.98  Aligned_cols=90  Identities=21%  Similarity=0.279  Sum_probs=77.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||++|||++++++|+++|++|++++|+.. .++..+++... + .++.++.+|++|.++++++++++.+.+
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA-G-GEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc-C-CeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999753 33444444432 2 258889999999999999999999999


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      +++|+||||||..
T Consensus        83 ~~id~lv~nAg~~   95 (260)
T PRK12823         83 GRIDVLINNVGGT   95 (260)
T ss_pred             CCCeEEEECCccc
Confidence            9999999999964

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.1e-16  Score=123.71  Aligned_cols=93  Identities=28%  Similarity=0.415  Sum_probs=78.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-------HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADL  149 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~  149 (173)
                      ++.+|+++||||++|||.+++++|+++|++|++++|+.+.       .++..+++... +. ++.++.+|+++.++++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~-~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GG-QALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CC-ceEEEEecCCCHHHHHHH
Confidence            3678999999999999999999999999999999997542       23334444432 32 688899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccCCC
Q 030706          150 VAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       150 ~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++++.+.+|++|+||||||+..
T Consensus        81 ~~~~~~~~g~id~li~~ag~~~  102 (273)
T PRK08278         81 VAKAVERFGGIDICVNNASAIN  102 (273)
T ss_pred             HHHHHHHhCCCCEEEECCCCcC
Confidence            9999999999999999999854

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.71  E-value=1.4e-16  Score=123.63  Aligned_cols=86  Identities=37%  Similarity=0.608  Sum_probs=77.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||++|||++++++|+++|++|++++|+++..++..+++... +  ++.++.+|++|+++++++++++.+.+|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~--~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-G--EVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C--CceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999999999988877777776543 2  478899999999999999999999999999


Q ss_pred             EEEEcccCC
Q 030706          162 IWVFMSDLH  170 (173)
Q Consensus       162 ~lVn~AG~~  170 (173)
                      +||||||+.
T Consensus        79 ~li~naG~~   87 (259)
T PRK08340         79 ALVWNAGNV   87 (259)
T ss_pred             EEEECCCCC
Confidence            999999975

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.4e-16  Score=123.51  Aligned_cols=89  Identities=24%  Similarity=0.353  Sum_probs=77.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++...  . ++.++.+|++|+++++++++++.+.+|.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999987766655544321  1 6889999999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||+..
T Consensus        79 id~lv~~ag~~~   90 (257)
T PRK07024         79 PDVVIANAGISV   90 (257)
T ss_pred             CCEEEECCCcCC
Confidence            999999999754

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=1.3e-16  Score=124.21  Aligned_cols=91  Identities=22%  Similarity=0.335  Sum_probs=73.6

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +++|+++||||  ++|||+++++.|+++|++|+++++... .++..+++.+..+.  ..++.+|++|+++++++++++.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS--DLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCC--cceeeccCCCHHHHHHHHHHHHH
Confidence            67899999996  689999999999999999999876422 22333344333332  34678999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      ++|++|+||||||+..
T Consensus        81 ~~g~iD~lvnnAG~~~   96 (260)
T PRK06997         81 HWDGLDGLVHSIGFAP   96 (260)
T ss_pred             HhCCCcEEEEccccCC
Confidence            9999999999999864

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.1e-16  Score=121.98  Aligned_cols=89  Identities=26%  Similarity=0.405  Sum_probs=78.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|+++||||++|||+++++.|+++|++|++++|+.+..++..+++... + .++.++.+|++|+++++++++++.+.+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-P-GQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999987777666666543 2 26889999999999999999999999999


Q ss_pred             ccEEEEcccCC
Q 030706          160 VDIWVFMSDLH  170 (173)
Q Consensus       160 id~lVn~AG~~  170 (173)
                      +|+||||||..
T Consensus        79 id~lI~~ag~~   89 (252)
T PRK07677         79 IDALINNAAGN   89 (252)
T ss_pred             ccEEEECCCCC
Confidence            99999999964

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.8e-16  Score=120.86  Aligned_cols=91  Identities=26%  Similarity=0.423  Sum_probs=80.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+..++..+++.  .+ .++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AG-GRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cC-CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999999877666555554  22 368899999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||...
T Consensus        80 ~~id~vi~~ag~~~   93 (252)
T PRK06138         80 GRLDVLVNNAGFGC   93 (252)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999754

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.6e-16  Score=121.77  Aligned_cols=92  Identities=30%  Similarity=0.393  Sum_probs=80.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.+.
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGP--EGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC--ceEEEECCCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999998777666666654422  4778899999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ++++|+||||||..
T Consensus        84 ~~~iD~vi~~ag~~   97 (264)
T PRK07576         84 FGPIDVLVSGAAGN   97 (264)
T ss_pred             cCCCCEEEECCCCC
Confidence            99999999999864

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.70  E-value=3.3e-16  Score=121.12  Aligned_cols=92  Identities=23%  Similarity=0.362  Sum_probs=82.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++||||++|+||+++++.|+++|++|++++|+++..++..+++... + .++.++++|++|.++++++++++.+.+
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA-G-GKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-C-ceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999988777777777543 3 258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||...
T Consensus        83 ~~~d~vi~~ag~~~   96 (262)
T PRK13394         83 GSVDILVSNAGIQI   96 (262)
T ss_pred             CCCCEEEECCccCC
Confidence            99999999999864

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.70  E-value=3.3e-16  Score=120.39  Aligned_cols=90  Identities=23%  Similarity=0.342  Sum_probs=76.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||++|||.+++++|+++|++|++++|+..  ++..+.+... + .++.++.+|+++.++++++++++.+.+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL-G-RRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc-C-CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999998652  2333334332 2 258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        79 ~~~d~li~~ag~~~   92 (248)
T TIGR01832        79 GHIDILVNNAGIIR   92 (248)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=3.4e-16  Score=120.21  Aligned_cols=90  Identities=27%  Similarity=0.401  Sum_probs=80.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++||||+|+||.+++++|+++|++|++++|+.+..++....+..  + .++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--G-GRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--C-CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999999999998777666665543  2 368899999999999999999999999


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      +++|+||||||..
T Consensus        80 ~~~d~vi~~ag~~   92 (251)
T PRK07231         80 GSVDILVNNAGTT   92 (251)
T ss_pred             CCCCEEEECCCCC
Confidence            9999999999974

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.70  E-value=4.6e-16  Score=120.34  Aligned_cols=92  Identities=28%  Similarity=0.469  Sum_probs=81.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+..++...++... +. ++.++.+|++|.++++++++.+.+.+
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GG-QAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999887777766666543 22 57888999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|++|||||+..
T Consensus        87 ~~~d~li~~ag~~~  100 (255)
T PRK06113         87 GKVDILVNNAGGGG  100 (255)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999754

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.70  E-value=4e-16  Score=120.28  Aligned_cols=93  Identities=26%  Similarity=0.387  Sum_probs=82.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      |+++|+++|||++++||.+++++|+++|++|++++|+.+..++...++....  .++.++.+|++|+++++++++++.+.
T Consensus         1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (258)
T PRK12429          1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG--GKAIGVAMDVTDEEAINAGIDYAVET   78 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999887777666665432  26888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++.+|+||||||...
T Consensus        79 ~~~~d~vi~~a~~~~   93 (258)
T PRK12429         79 FGGVDILVNNAGIQH   93 (258)
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999754

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.4e-16  Score=119.07  Aligned_cols=93  Identities=20%  Similarity=0.244  Sum_probs=82.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++|||++|+||+++++.|+++|++|++++|+++..++..++++...  .++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG--GRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999887777766665432  25888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||...
T Consensus        82 ~~~id~vi~~ag~~~   96 (250)
T PRK12939         82 LGGLDGLVNNAGITN   96 (250)
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.70  E-value=3.7e-16  Score=120.88  Aligned_cols=91  Identities=18%  Similarity=0.257  Sum_probs=76.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|+++|||+++|||++++++|++.|++|+++++...  ++..+++... + .++.++++|++|.++++++++++.++
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL-G-RRFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            477999999999999999999999999999998887542  3334444432 2 25888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        83 ~~~~D~li~~Ag~~~   97 (253)
T PRK08993         83 FGHIDILVNNAGLIR   97 (253)
T ss_pred             hCCCCEEEECCCCCC
Confidence            999999999999854

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=3.7e-16  Score=120.17  Aligned_cols=92  Identities=20%  Similarity=0.378  Sum_probs=79.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEE-EecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.+|+++||||++|||++++++|+++|++|++ ..|+.+..++..++++.. + .++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-G-RKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999876 477777766666666543 2 26888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||...
T Consensus        80 ~~~id~vi~~ag~~~   94 (250)
T PRK08063         80 FGRLDVFVNNAASGV   94 (250)
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999753

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6.1e-16  Score=120.85  Aligned_cols=93  Identities=24%  Similarity=0.292  Sum_probs=81.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++||||++|+||.+++++|+++|++|++++|+.+..++..+++.......++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999887776666665543222368888999999999999999999999


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      +++|+||||||..
T Consensus        85 ~~~d~li~~ag~~   97 (276)
T PRK05875         85 GRLHGVVHCAGGS   97 (276)
T ss_pred             CCCCEEEECCCcc
Confidence            9999999999965

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=5.9e-16  Score=119.91  Aligned_cols=92  Identities=25%  Similarity=0.378  Sum_probs=80.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.+..+...+++... + .++.++.+|++|+++++++++++.+.
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~-~~~~~~~~Dl~d~~~i~~~~~~~~~~   86 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-G-IDALWIAADVADEADIERLAEETLER   86 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999887766666665443 2 25788999999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ++++|++|||||..
T Consensus        87 ~~~id~vi~~ag~~  100 (259)
T PRK08213         87 FGHVDILVNNAGAT  100 (259)
T ss_pred             hCCCCEEEECCCCC
Confidence            99999999999975

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.5e-15  Score=119.98  Aligned_cols=93  Identities=28%  Similarity=0.307  Sum_probs=78.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.+. .+.....+... + .++.++.+|++|.++++++++++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~i~  119 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE-G-VKCLLIPGDVSDEAFCKDAVEETV  119 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-C-CeEEEEEccCCCHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999997533 33444444322 3 368889999999999999999999


Q ss_pred             HhcCCccEEEEcccCC
Q 030706          155 KNLKYVDIWVFMSDLH  170 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~  170 (173)
                      +.++++|+||||||..
T Consensus       120 ~~~~~iD~lI~~Ag~~  135 (290)
T PRK06701        120 RELGRLDILVNNAAFQ  135 (290)
T ss_pred             HHcCCCCEEEECCccc
Confidence            9999999999999975

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.1e-16  Score=120.40  Aligned_cols=85  Identities=32%  Similarity=0.411  Sum_probs=74.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||++|||+++++.|+++|++|++++|+.+.        . ..+ .++.++.+|++++++++++++++.+.
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~-~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   72 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------T-VDG-RPAEFHAADVRDPDQVAALVDAIVER   72 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------h-hcC-CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999998643        0 112 25788999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        73 ~~~id~vi~~ag~~~   87 (252)
T PRK07856         73 HGRLDVLVNNAGGSP   87 (252)
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999754

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.69  E-value=8.4e-16  Score=117.77  Aligned_cols=93  Identities=22%  Similarity=0.349  Sum_probs=78.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ++++|+++||||++|||++++++|+++|++|+++.++.+ ..++..+++... + .++.++.+|++|.++++++++++.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-G-GRAIAVQADVADAAAVTRLFDAAET   79 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999988877543 344444555432 3 3688999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .++++|+||||||+..
T Consensus        80 ~~~~id~vi~~ag~~~   95 (245)
T PRK12937         80 AFGRIDVLVNNAGVMP   95 (245)
T ss_pred             HcCCCCEEEECCCCCC
Confidence            9999999999999754

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6.8e-16  Score=118.27  Aligned_cols=91  Identities=25%  Similarity=0.325  Sum_probs=79.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++|+++||||+++||+.+++.|+++|++|++++|+.+..++..+.+... + .++.++.+|++|++++.++++++.+.++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST-G-VKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC-C-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4589999999999999999999999999999999987776666665543 2 2588899999999999999999999999


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||...
T Consensus        83 ~id~lv~~ag~~~   95 (241)
T PRK07454         83 CPDVLINNAGMAY   95 (241)
T ss_pred             CCCEEEECCCccC
Confidence            9999999999753

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.69  E-value=5.1e-16  Score=120.13  Aligned_cols=89  Identities=27%  Similarity=0.387  Sum_probs=78.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++|||+++|||+++++.|+++|++|++++|+.+..++..+++    . .++.++.+|++|+++++++++++.+.+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI----G-PAAIAVSLDVTRQDSIDRIVAAAVERF   78 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh----C-CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999887766554443    2 257888999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||...
T Consensus        79 ~~id~li~~ag~~~   92 (257)
T PRK07067         79 GGIDILFNNAALFD   92 (257)
T ss_pred             CCCCEEEECCCcCC
Confidence            99999999999753

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.69  E-value=7.7e-16  Score=119.43  Aligned_cols=91  Identities=27%  Similarity=0.384  Sum_probs=77.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++||||++|||++++++|+++|++|++++|+.. ..+..+++... + .++.++.+|++++++++++++++.+.+
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR-G-HRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-C-CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999864 33444444332 2 257889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        81 ~~id~vi~~ag~~~   94 (263)
T PRK08226         81 GRIDILVNNAGVCR   94 (263)
T ss_pred             CCCCEEEECCCcCC
Confidence            99999999999753

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.69  E-value=8.7e-16  Score=119.17  Aligned_cols=93  Identities=27%  Similarity=0.418  Sum_probs=79.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++|+++||||++|||+++++.|+++|++|+++.|+. +..+...+++... + .++.++.+|++|.++++++++++.+.
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-G-GEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-C-CeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999988854 3445555555443 2 36888999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      ++++|+||||||+..+
T Consensus        83 ~g~id~lv~~ag~~~~   98 (261)
T PRK08936         83 FGTLDVMINNAGIENA   98 (261)
T ss_pred             cCCCCEEEECCCCCCC
Confidence            9999999999998643

>PRK06398 aldose dehydrogenase; Validated

Probab=99.69  E-value=3.3e-16  Score=121.64  Aligned_cols=81  Identities=26%  Similarity=0.320  Sum_probs=73.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||++|||++++++|+++|++|++++|+....             .++.++.+|++|+++++++++++.+.+
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~~~   70 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-------------NDVDYFKVDVSNKEQVIKGIDYVISKY   70 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-------------CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            6789999999999999999999999999999999976431             147788999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        71 ~~id~li~~Ag~~~   84 (258)
T PRK06398         71 GRIDILVNNAGIES   84 (258)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999853

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.68  E-value=5.7e-16  Score=121.25  Aligned_cols=92  Identities=20%  Similarity=0.273  Sum_probs=79.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+|+++||||+|+||.++++.|+++|++|++++|+.+..++..+++.....+.++.++.+|++|++++++ ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            5789999999999999999999999999999999987776665555443322368899999999999999 999999999


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|++|||||...
T Consensus        81 ~id~vv~~ag~~~   93 (280)
T PRK06914         81 RIDLLVNNAGYAN   93 (280)
T ss_pred             CeeEEEECCcccc
Confidence            9999999999765

>PRK06484 short chain dehydrogenase; Validated

Probab=99.68  E-value=9.6e-16  Score=129.79  Aligned_cols=89  Identities=29%  Similarity=0.442  Sum_probs=78.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ...+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++..+.+|++|+++++++++++.+.
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GD-EHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceeEEEccCCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999999999999887766555433    22 5777899999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      +|++|+||||||+.
T Consensus       341 ~g~id~li~nAg~~  354 (520)
T PRK06484        341 WGRLDVLVNNAGIA  354 (520)
T ss_pred             cCCCCEEEECCCCc
Confidence            99999999999986

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.68  E-value=6.3e-16  Score=119.86  Aligned_cols=92  Identities=21%  Similarity=0.268  Sum_probs=79.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      -.+|+++||||++|||++++++|+++| ++|++++|+.+. .++..+++..... .++.++.+|++|+++++++++++.+
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGA-SSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCC-CceEEEEecCCChHHHHHHHHHHHh
Confidence            357899999999999999999999995 899999998875 7777777765433 2688999999999999999999886


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                       +|++|++|||+|+..
T Consensus        85 -~g~id~li~~ag~~~   99 (253)
T PRK07904         85 -GGDVDVAIVAFGLLG   99 (253)
T ss_pred             -cCCCCEEEEeeecCC
Confidence             589999999999864

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=1.1e-15  Score=117.04  Aligned_cols=92  Identities=29%  Similarity=0.389  Sum_probs=81.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+++++|||++++||.+++++|+++|++|++++|+.+..++...++... + .++.++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY-G-VKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-C-CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999999999999999999999987777766666433 3 368889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||...
T Consensus        83 ~~id~vi~~ag~~~   96 (239)
T PRK07666         83 GSIDILINNAGISK   96 (239)
T ss_pred             CCccEEEEcCcccc
Confidence            99999999999754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.68  E-value=8.3e-16  Score=118.04  Aligned_cols=92  Identities=14%  Similarity=0.210  Sum_probs=76.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++|+++|||+++|||++++++|+++|++|++.. ++....++..+++... + .++.++.+|++|.++++++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-G-FDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4579999999999999999999999999988854 4444444445555433 2 25778899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        79 ~~~id~li~~ag~~~   93 (246)
T PRK12938         79 VGEIDVLVNNAGITR   93 (246)
T ss_pred             hCCCCEEEECCCCCC
Confidence            999999999999864

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.5e-15  Score=117.37  Aligned_cols=92  Identities=27%  Similarity=0.376  Sum_probs=81.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++||||+||||+++++.|+++|++|++++|+.+..++...++.....  ++.++.+|++++++++++++++.+.+
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGG--AAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            6789999999999999999999999999999999998877777666644322  57889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|++|||||+..
T Consensus        85 ~~~d~li~~ag~~~   98 (258)
T PRK06949         85 GTIDILVNNSGVST   98 (258)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999753

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.4e-15  Score=117.82  Aligned_cols=92  Identities=24%  Similarity=0.356  Sum_probs=76.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ..+|+++||||++|||++++++|+++|++|+++.+. .+..+....++... + .++.++.+|++|.++++++++++.+.
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-G-RRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999887764 44455555555433 2 25888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        85 ~~~iD~vi~~ag~~~   99 (258)
T PRK09134         85 LGPITLLVNNASLFE   99 (258)
T ss_pred             cCCCCEEEECCcCCC
Confidence            999999999999754

>PRK12743 oxidoreductase; Provisional

Probab=99.67  E-value=1.1e-15  Score=118.38  Aligned_cols=90  Identities=21%  Similarity=0.196  Sum_probs=77.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      +|+++||||++|||++++++|+++|++|+++++ +.+..+...+++... + .++.++.+|++|.++++++++++.+.++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-G-VRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-C-CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999998865 445555555555543 2 2688899999999999999999999999


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||...
T Consensus        80 ~id~li~~ag~~~   92 (256)
T PRK12743         80 RIDVLVNNAGAMT   92 (256)
T ss_pred             CCCEEEECCCCCC
Confidence            9999999999754

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.2e-15  Score=118.53  Aligned_cols=90  Identities=22%  Similarity=0.371  Sum_probs=78.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++++++||||++|||++++++|+++|++|++++|+.+..++...++ . .+ .++.++.+|++|.++++++++.+.+ +
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~-~~~~~~~~D~~d~~~~~~~~~~~~~-~   78 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-YP-GRHRWVVADLTSEAGREAVLARARE-M   78 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-cC-CceEEEEccCCCHHHHHHHHHHHHh-c
Confidence            57899999999999999999999999999999999988777766665 2 23 3688899999999999999999876 8


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        79 ~~id~lv~~ag~~~   92 (263)
T PRK09072         79 GGINVLINNAGVNH   92 (263)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999754

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.67  E-value=1.1e-15  Score=133.29  Aligned_cols=95  Identities=22%  Similarity=0.310  Sum_probs=83.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+..+...+++....+..++..+.+|++|+++++++++++.+.
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999998877776666654434335788999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus       491 ~g~iDilV~nAG~~~  505 (676)
T TIGR02632       491 YGGVDIVVNNAGIAT  505 (676)
T ss_pred             cCCCcEEEECCCCCC
Confidence            999999999999864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=1.4e-15  Score=116.85  Aligned_cols=92  Identities=20%  Similarity=0.325  Sum_probs=81.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++++++|||+++|||.++++.|+++|++|++++|+.+..++..+++... + .++.++.+|+++.++++++++++.+.+
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-G-TEVRGYAANVTDEEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999987777766666543 2 258889999999999999999999888


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        81 ~~id~vi~~ag~~~   94 (253)
T PRK08217         81 GQLNGLINNAGILR   94 (253)
T ss_pred             CCCCEEEECCCccC
Confidence            99999999999753

>PRK07985 oxidoreductase; Provisional

Probab=99.67  E-value=9.8e-16  Score=121.33  Aligned_cols=92  Identities=26%  Similarity=0.308  Sum_probs=76.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+++|++|||||++|||++++++|+++|++|++++++.  +..++..+.+... +. ++.++.+|++|+++++++++++.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC-GR-KAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc-CC-eEEEEEccCCCHHHHHHHHHHHH
Confidence            47889999999999999999999999999999988753  2334443333322 32 57889999999999999999999


Q ss_pred             HhcCCccEEEEcccCC
Q 030706          155 KNLKYVDIWVFMSDLH  170 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~  170 (173)
                      +.+|++|++|||||+.
T Consensus       124 ~~~g~id~lv~~Ag~~  139 (294)
T PRK07985        124 KALGGLDIMALVAGKQ  139 (294)
T ss_pred             HHhCCCCEEEECCCCC
Confidence            9999999999999974

>PRK05855 short chain dehydrogenase; Validated

Probab=99.67  E-value=9.5e-16  Score=130.64  Aligned_cols=93  Identities=18%  Similarity=0.264  Sum_probs=83.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.++++|||||++|||++++++|+++|++|++++|+.+..++..+++...+.  ++.++.+|++|.++++++++++.+.
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGA--VAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            46678999999999999999999999999999999998887777777654432  5889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus       390 ~g~id~lv~~Ag~~~  404 (582)
T PRK05855        390 HGVPDIVVNNAGIGM  404 (582)
T ss_pred             cCCCcEEEECCccCC
Confidence            999999999999864

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=1e-15  Score=118.41  Aligned_cols=88  Identities=34%  Similarity=0.498  Sum_probs=74.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ++.+|+++||||++|||+++++.|+++|++|++++++.+..   .+++...    ++.++.+|++|+++++++++++.+.
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVVEKE   76 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999887654322   2223221    3678899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        77 ~~~id~li~~ag~~~   91 (255)
T PRK06463         77 FGRVDVLVNNAGIMY   91 (255)
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999853

>PRK06182 short chain dehydrogenase; Validated

Probab=99.67  E-value=7.6e-16  Score=120.31  Aligned_cols=85  Identities=21%  Similarity=0.246  Sum_probs=74.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++|+++|||++||||+++++.|+++|++|++++|+.+.+++..    .  .  .+.++.+|++|.++++++++++.+.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~--~--~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S--L--GVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h--C--CCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999876654322    1  1  367889999999999999999999999


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||+..
T Consensus        74 ~id~li~~ag~~~   86 (273)
T PRK06182         74 RIDVLVNNAGYGS   86 (273)
T ss_pred             CCCEEEECCCcCC
Confidence            9999999999864

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.67  E-value=5.5e-16  Score=120.75  Aligned_cols=84  Identities=25%  Similarity=0.238  Sum_probs=73.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .++++++||||+||||++++++|+++|++|++++|+.+..+.          ..++.++++|++|+++++++++++.+.+
T Consensus         2 ~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~   71 (270)
T PRK06179          2 SNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARA   71 (270)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999998654321          1247788999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        72 g~~d~li~~ag~~~   85 (270)
T PRK06179         72 GRIDVLVNNAGVGL   85 (270)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999854

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.5e-15  Score=116.61  Aligned_cols=89  Identities=26%  Similarity=0.368  Sum_probs=77.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||+++||.+++++|+++|++|++++|+.+..++..+++    +. ++.++++|++|.+++..+++++.+.+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GE-SALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----CC-ceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999876555444333    32 57889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||...
T Consensus        79 ~~id~vi~~ag~~~   92 (249)
T PRK06500         79 GRLDAVFINAGVAK   92 (249)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999754

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.3e-15  Score=117.44  Aligned_cols=93  Identities=23%  Similarity=0.314  Sum_probs=75.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      |+++|+++||||++|||+++++.|++.|++|++++ ++.+..++...++.....  ++..+.+|+++.++++.+++++.+
T Consensus         1 ~~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   78 (252)
T PRK12747          1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG--SAFSIGANLESLHGVEALYSSLDN   78 (252)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCC--ceEEEecccCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999998875 555666666666654322  477889999999999999988775


Q ss_pred             h----cC--CccEEEEcccCCC
Q 030706          156 N----LK--YVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~----~g--~id~lVn~AG~~~  171 (173)
                      .    +|  ++|+||||||+..
T Consensus        79 ~~~~~~g~~~id~lv~~Ag~~~  100 (252)
T PRK12747         79 ELQNRTGSTKFDILINNAGIGP  100 (252)
T ss_pred             HhhhhcCCCCCCEEEECCCcCC
Confidence            3    34  8999999999753

>PRK09135 pteridine reductase; Provisional

Probab=99.67  E-value=2.1e-15  Score=115.60  Aligned_cols=93  Identities=22%  Similarity=0.212  Sum_probs=77.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.++++|||||+|+||++++++|+++|++|++++|+. +..+.....+....+. .+.++.+|++|.++++++++++.+.
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPG-SAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999864 3344444444433232 5788899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||...
T Consensus        83 ~~~~d~vi~~ag~~~   97 (249)
T PRK09135         83 FGRLDALVNNASSFY   97 (249)
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999754

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.67  E-value=9.1e-16  Score=123.01  Aligned_cols=92  Identities=17%  Similarity=0.316  Sum_probs=74.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..|++++||||++|||++++++|+++|++|++++|+++.+++..+++...++..++..+.+|+++  ++.+.++++.+.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            34899999999999999999999999999999999999988888888766544468888999985  2334444444444


Q ss_pred             C--CccEEEEcccCCC
Q 030706          158 K--YVDIWVFMSDLHS  171 (173)
Q Consensus       158 g--~id~lVn~AG~~~  171 (173)
                      +  .+|+||||||+..
T Consensus       129 ~~~didilVnnAG~~~  144 (320)
T PLN02780        129 EGLDVGVLINNVGVSY  144 (320)
T ss_pred             cCCCccEEEEecCcCC
Confidence            4  4669999999864

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.67  E-value=5.7e-16  Score=123.24  Aligned_cols=94  Identities=19%  Similarity=0.206  Sum_probs=74.4

Q ss_pred             CCCCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHH--------hCC---ceEEEEEeeC--
Q 030706           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE--------FGE---QHVWGTKCDV--  140 (173)
Q Consensus        76 ~~~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~~---~~~~~~~~Dv--  140 (173)
                      +.++||++||||+  ++|||+++|+.|++.|++|++ +|+.+.++.....+...        ...   .....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            3488999999999  799999999999999999998 77777776666555421        001   0145678898  


Q ss_pred             CC------------------HHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          141 SE------------------GNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       141 ~~------------------~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      ++                  +++++++++++.+.+|++|+||||||+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~  131 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANG  131 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCcc
Confidence            43                  4489999999999999999999999864

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.4e-15  Score=118.70  Aligned_cols=89  Identities=24%  Similarity=0.384  Sum_probs=79.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |+++||||+||||++++++|+++|++|++++|+.+..++...++.....  ++.++.+|++|+++++++++++.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGG--DGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999999999999998887777777765422  58889999999999999999999999999


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+||||||+..
T Consensus        79 d~lI~~ag~~~   89 (270)
T PRK05650         79 DVIVNNAGVAS   89 (270)
T ss_pred             CEEEECCCCCC
Confidence            99999999864

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.5e-15  Score=118.65  Aligned_cols=89  Identities=21%  Similarity=0.275  Sum_probs=77.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |+++||||++|||+++++.|+++|++|++++|+.+..++..+++...... .+.++.+|++|+++++++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGT-VPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC-cceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            47999999999999999999999999999999987777777776654332 35667899999999999999999999999


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+||||||+.
T Consensus        80 d~lv~~ag~~   89 (272)
T PRK07832         80 DVVMNIAGIS   89 (272)
T ss_pred             CEEEECCCCC
Confidence            9999999975

>PRK06484 short chain dehydrogenase; Validated

Probab=99.66  E-value=1.1e-15  Score=129.49  Aligned_cols=88  Identities=27%  Similarity=0.439  Sum_probs=78.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+|+++|||+++|||+++++.|+++|++|++++|+.+.+++...++    +. ++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GP-DHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999887766555443    22 57789999999999999999999999


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      |++|+||||||+.
T Consensus        78 g~iD~li~nag~~   90 (520)
T PRK06484         78 GRIDVLVNNAGVT   90 (520)
T ss_pred             CCCCEEEECCCcC
Confidence            9999999999984

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.4e-15  Score=119.26  Aligned_cols=87  Identities=31%  Similarity=0.415  Sum_probs=74.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+..++..+++... + .++.++.+|++|+++++++++++ +++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA-G-FDVSTQEVDVSSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence            589999998 699999999996 8999999999887777666666543 2 26888999999999999999988 56899


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||+..
T Consensus        77 id~li~nAG~~~   88 (275)
T PRK06940         77 VTGLVHTAGVSP   88 (275)
T ss_pred             CCEEEECCCcCC
Confidence            999999999863

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.5e-15  Score=119.01  Aligned_cols=89  Identities=25%  Similarity=0.232  Sum_probs=76.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++||||+||||++++++|+++|++|++++|+.+..+....    ..+ .++.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~----~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~   76 (277)
T PRK06180          2 SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LHP-DRALARLLDVTDFDAIDAVVADAEATF   76 (277)
T ss_pred             CCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh----hcC-CCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999998766543322    222 257888999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        77 ~~~d~vv~~ag~~~   90 (277)
T PRK06180         77 GPIDVLVNNAGYGH   90 (277)
T ss_pred             CCCCEEEECCCccC
Confidence            99999999999854

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.66  E-value=2.1e-15  Score=115.88  Aligned_cols=92  Identities=25%  Similarity=0.407  Sum_probs=80.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||+++||.+++++|+++|++|++++|+.+..++...++... + .++.++.+|++|.++++++++++.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-G-GNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999987776666666543 2 258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|++|||||...
T Consensus        79 ~~~d~vi~~ag~~~   92 (250)
T TIGR03206        79 GPVDVLVNNAGWDK   92 (250)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999753

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.66  E-value=1e-15  Score=117.08  Aligned_cols=84  Identities=23%  Similarity=0.285  Sum_probs=72.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|++|||||++|||++++++|+++|++|++++|+.+...   +.+...    .+.++.+|++|+++++++++++.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            579999999999999999999999999999999865432   223221    2567899999999999999999999999


Q ss_pred             ccEEEEcccCC
Q 030706          160 VDIWVFMSDLH  170 (173)
Q Consensus       160 id~lVn~AG~~  170 (173)
                      +|++|||||+.
T Consensus        75 id~lv~~ag~~   85 (236)
T PRK06483         75 LRAIIHNASDW   85 (236)
T ss_pred             ccEEEECCccc
Confidence            99999999975

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2e-15  Score=116.86  Aligned_cols=93  Identities=18%  Similarity=0.248  Sum_probs=75.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh----hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .+++|+++|||+++|||+++++.|+++|++|++++++.    +..++..+++... + .++.++++|++|++++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-G-AKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-C-CcEEEEecCcCCHHHHHHHHHH
Confidence            36789999999999999999999999999977766432    2333444444332 2 2588899999999999999999


Q ss_pred             HHHhcCCccEEEEcccCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~  171 (173)
                      +.+.++++|+||||||+..
T Consensus        83 ~~~~~~~id~li~~ag~~~  101 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVL  101 (257)
T ss_pred             HHHhhCCCCEEEECCcccC
Confidence            9999999999999999753

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.66  E-value=2.2e-15  Score=115.61  Aligned_cols=93  Identities=22%  Similarity=0.321  Sum_probs=81.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ++.+|+++||||+|+||.+++++|+++|++|++++|+.+...+....+.....  ++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG--KARARQVDVRDRAALKAAVAAGVED   80 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEECCCCCHHHHHHHHHHHHHH
Confidence            36689999999999999999999999999999999998776666666654322  5888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++.+|+||||+|...
T Consensus        81 ~~~~d~vi~~ag~~~   95 (251)
T PRK12826         81 FGRLDILVANAGIFP   95 (251)
T ss_pred             hCCCCEEEECCCCCC
Confidence            999999999998765

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.5e-15  Score=116.42  Aligned_cols=89  Identities=30%  Similarity=0.357  Sum_probs=77.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++|||+++|||+++++.|+++|++|++++|+.+..++..+++....+. ++.++.+|++|++++++++++    +
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~----~   79 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGV-DVAVHALDLSSPEAREQLAAE----A   79 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEecCCCHHHHHHHHHH----h
Confidence            67899999999999999999999999999999999988777777777654443 688899999999999888754    5


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        80 g~id~lv~~ag~~~   93 (259)
T PRK06125         80 GDIDILVNNAGAIP   93 (259)
T ss_pred             CCCCEEEECCCCCC
Confidence            89999999999864

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.65  E-value=1.5e-15  Score=118.35  Aligned_cols=90  Identities=17%  Similarity=0.228  Sum_probs=72.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHH----HHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEV----ADLVAFAQK  155 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v----~~~~~~~~~  155 (173)
                      ++++||||++|||+++++.|+++|++|+++++ +.+..++..+++....+. ++.++.+|++|++++    +++++++.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPN-SAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCC-ceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            58999999999999999999999999999875 455666666666443333 577789999999865    556666677


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        81 ~~g~iD~lv~nAG~~~   96 (267)
T TIGR02685        81 AFGRCDVLVNNASAFY   96 (267)
T ss_pred             ccCCceEEEECCccCC
Confidence            8899999999999754

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.4e-15  Score=114.78  Aligned_cols=91  Identities=27%  Similarity=0.406  Sum_probs=77.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++|+++||||+||||+++++.|+++|++|++++|+.+ ..+....++... + .++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-G-GRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999999998753 344444455433 2 25788999999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ++.+|+||||||..
T Consensus        82 ~~~~d~vi~~ag~~   95 (248)
T PRK07806         82 FGGLDALVLNASGG   95 (248)
T ss_pred             CCCCcEEEECCCCC
Confidence            99999999999864

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.65  E-value=3.2e-15  Score=114.86  Aligned_cols=92  Identities=30%  Similarity=0.433  Sum_probs=77.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++|+++||||++|||.+++++|+++|++|+++.+ +++..++..+++... + .++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-G-HDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999987654 445555555555432 2 26889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||...
T Consensus        82 ~~~id~vi~~ag~~~   96 (247)
T PRK12935         82 FGKVDILVNNAGITR   96 (247)
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999854

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.7e-15  Score=118.80  Aligned_cols=85  Identities=25%  Similarity=0.236  Sum_probs=73.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  157 (173)
                      .+|+++||||+||||+++++.|+++|++|++++|+.+.+++.    ...    .+.++.+|++|.++++++++++.+.+ 
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l----~~~----~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL----EAE----GLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHC----CceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999987665433    221    36778999999999999999987766 


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        75 g~id~li~~Ag~~~   88 (277)
T PRK05993         75 GRLDALFNNGAYGQ   88 (277)
T ss_pred             CCccEEEECCCcCC
Confidence            68999999999764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=2.5e-15  Score=115.66  Aligned_cols=94  Identities=19%  Similarity=0.277  Sum_probs=80.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC--CHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS--EGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~--~~~~v~~~~~~~~  154 (173)
                      .+++|+++|||++++||.+++++|++.|++|++++|+.+..++..+++...... ++.++.+|++  ++++++++++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGP-QPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEecccCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988777777776654332 5667777875  8899999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.++++|+||||||...
T Consensus        88 ~~~~~id~vi~~Ag~~~  104 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLG  104 (247)
T ss_pred             HHhCCCCEEEECCcccC
Confidence            99999999999999753

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.3e-15  Score=115.31  Aligned_cols=91  Identities=29%  Similarity=0.363  Sum_probs=76.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +++.+|+++||||++|||.++++.|+++|++|++++|+.+. .+...++.   + .++.++.+|++++++++++++++.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~---~-~~~~~~~~Dl~~~~~~~~~~~~~~~   85 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL---G-GNAKGLVCDVSDSQSVEAAVAAVIS   85 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh---C-CceEEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998653 22222221   2 2567889999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .++++|+||||||+..
T Consensus        86 ~~~~~d~vi~~ag~~~  101 (255)
T PRK06841         86 AFGRIDILVNSAGVAL  101 (255)
T ss_pred             HhCCCCEEEECCCCCC
Confidence            9999999999999854

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2.4e-15  Score=116.51  Aligned_cols=87  Identities=20%  Similarity=0.200  Sum_probs=75.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh-cCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN-LKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~  159 (173)
                      |+++||||++|||++++++|+++|++|++++|+.+..++....+.    +.++.++++|++|.++++++++++.+. +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999998877666544432    236889999999999999999998776 789


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||+..
T Consensus        78 id~vi~~ag~~~   89 (260)
T PRK08267         78 LDVLFNNAGILR   89 (260)
T ss_pred             CCEEEECCCCCC
Confidence            999999999864

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.9e-15  Score=116.86  Aligned_cols=87  Identities=25%  Similarity=0.308  Sum_probs=75.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||++|||.+++++|+++|++|++++|+....++..+++    .   ..++++|++|+++++++++++.+.+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~---~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----G---GLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----C---CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999876655444332    1   2467899999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||...
T Consensus        78 ~~id~vi~~ag~~~   91 (255)
T PRK06057         78 GSVDIAFNNAGISP   91 (255)
T ss_pred             CCCCEEEECCCcCC
Confidence            99999999999753

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=2.6e-15  Score=116.35  Aligned_cols=92  Identities=22%  Similarity=0.336  Sum_probs=74.8

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecC-----------hhhHHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706           78 LPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRS-----------AERVDSAVQSLREEFGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        78 ~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~  144 (173)
                      +++|+++||||+  +|||+++|++|+++|++|+++++.           .+...+..+++... + .++.++.+|++|.+
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-~~~~~~~~D~~~~~   81 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-G-VKVSSMELDLTQND   81 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHH
Confidence            789999999998  499999999999999999987642           12222333334332 3 36889999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++++++++.+.+|++|+||||||+..
T Consensus        82 ~i~~~~~~~~~~~g~id~li~~ag~~~  108 (256)
T PRK12859         82 APKELLNKVTEQLGYPHILVNNAAYST  108 (256)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCC
Confidence            999999999999999999999999754

>TIGR02415 23BDH acetoin reductases

Probab=99.65  E-value=2.9e-15  Score=115.43  Aligned_cols=89  Identities=22%  Similarity=0.332  Sum_probs=78.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |+++|||++++||.+++++|++.|++|++++|+.+..++..+++... + .++.++.+|++|+++++++++++.+.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-G-GKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999877766666666543 2 268889999999999999999999999999


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+||||||+..
T Consensus        79 d~vi~~ag~~~   89 (254)
T TIGR02415        79 DVMVNNAGVAP   89 (254)
T ss_pred             CEEEECCCcCC
Confidence            99999999854

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3e-15  Score=113.98  Aligned_cols=91  Identities=19%  Similarity=0.201  Sum_probs=78.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++|||++|+||++++++|+++|++|++++|+.+...+...++...    .+.++.+|++|.++++++++++.+.
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~   79 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAARRAVDEVNRQ   79 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc----CceEEEeecCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999887666655555432    3566789999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+|||++|...
T Consensus        80 ~~~~d~vi~~ag~~~   94 (239)
T PRK12828         80 FGRLDALVNIAGAFV   94 (239)
T ss_pred             hCCcCEEEECCcccC
Confidence            999999999999753

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.65  E-value=1e-15  Score=110.63  Aligned_cols=90  Identities=23%  Similarity=0.285  Sum_probs=81.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.+|-+.+||||.+|+|++.++.|+++|+.|++.|....+..+..+++    ++ ++.|...|+++++++...+...+.+
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel----g~-~~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL----GG-KVVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh----CC-ceEEeccccCcHHHHHHHHHHHHhh
Confidence            356789999999999999999999999999999999877777766665    33 6999999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ||++|.+|||||+..
T Consensus        81 fgrld~~vncagia~   95 (260)
T KOG1199|consen   81 FGRLDALVNCAGIAY   95 (260)
T ss_pred             ccceeeeeeccceee
Confidence            999999999999864

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.65  E-value=4e-15  Score=113.87  Aligned_cols=89  Identities=28%  Similarity=0.359  Sum_probs=77.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||+|+||++++++|+++|+.|++.+++.+..++....+    +. ++.++.+|++|.++++++++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----GE-RVKIFPANLSDRDEVKALGQKAEADL   78 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CC-ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999988876665544332    22 57788999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||...
T Consensus        79 ~~id~vi~~ag~~~   92 (245)
T PRK12936         79 EGVDILVNNAGITK   92 (245)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2.5e-15  Score=130.44  Aligned_cols=92  Identities=28%  Similarity=0.329  Sum_probs=82.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++....  .++.++.+|++|.++++++++++.+.
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG--GTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4778999999999999999999999999999999999888777777765432  25888999999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      +|++|+||||||+.
T Consensus       446 ~g~id~li~~Ag~~  459 (657)
T PRK07201        446 HGHVDYLVNNAGRS  459 (657)
T ss_pred             cCCCCEEEECCCCC
Confidence            99999999999975

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=3e-15  Score=115.83  Aligned_cols=92  Identities=16%  Similarity=0.209  Sum_probs=75.1

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecCh-----------hhHHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706           78 LPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSA-----------ERVDSAVQSLREEFGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        78 ~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~-----------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~  144 (173)
                      +++|++|||||++  |||.+++++|+++|++|++++|++           ........++.. .+ .++.++.+|+++++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~   80 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-YG-VRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh-cC-CeEEEEECCCCCHH
Confidence            5789999999994  999999999999999999999872           111122333332 23 26889999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++++++++.+.++++|+||||||+..
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~~  107 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYST  107 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCC
Confidence            999999999999999999999999853

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.65  E-value=4.7e-15  Score=116.07  Aligned_cols=92  Identities=26%  Similarity=0.340  Sum_probs=79.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++||||+++||++++++|+++|++|++++|+.+..++...++... +. ++.++.+|++|+++++++++++.+.+
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-GG-EAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            55689999999999999999999999999999999877666655555433 22 58888999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        86 ~~id~vi~~Ag~~~   99 (274)
T PRK07775         86 GEIEVLVSGAGDTY   99 (274)
T ss_pred             CCCCEEEECCCcCC
Confidence            99999999999864

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.7e-15  Score=114.48  Aligned_cols=90  Identities=23%  Similarity=0.329  Sum_probs=75.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      +|++|||||+++||.+++++|+++|++|+++++ +++..++....+... + .++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-G-GEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC-C-CcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999988874 444444444445432 2 2578899999999999999999999999


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||...
T Consensus        80 ~id~li~~ag~~~   92 (248)
T PRK06123         80 RLDALVNNAGILE   92 (248)
T ss_pred             CCCEEEECCCCCC
Confidence            9999999999864

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.5e-15  Score=116.37  Aligned_cols=83  Identities=29%  Similarity=0.306  Sum_probs=73.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+..          .. .++.++.+|++|+++++++++++.+.
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------LP-EGVEFVAADLTTAEGCAAVARAVLER   74 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------cC-CceeEEecCCCCHHHHHHHHHHHHHH
Confidence            37789999999999999999999999999999999975421          11 25788999999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ++++|+||||||+.
T Consensus        75 ~~~id~vi~~ag~~   88 (260)
T PRK06523         75 LGGVDILVHVLGGS   88 (260)
T ss_pred             cCCCCEEEECCccc
Confidence            99999999999964

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.64  E-value=3e-15  Score=116.01  Aligned_cols=89  Identities=17%  Similarity=0.248  Sum_probs=77.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHH----cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           82 NVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++||||++|||++++++|++    .|++|++++|+.+.+++..+++....+..++.++.+|++|.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999988888887777653333368889999999999999999998887


Q ss_pred             CCc----cEEEEcccCC
Q 030706          158 KYV----DIWVFMSDLH  170 (173)
Q Consensus       158 g~i----d~lVn~AG~~  170 (173)
                      |.+    |+||||||+.
T Consensus        82 g~~~~~~~~lv~nAG~~   98 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTL   98 (256)
T ss_pred             ccCCCceEEEEeCCccc
Confidence            653    6999999975

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.64  E-value=4.8e-15  Score=114.35  Aligned_cols=90  Identities=26%  Similarity=0.305  Sum_probs=75.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .|+++|||+++|||.+++++|+++|++|++++|+. +..++..+.+... + .++.++.+|++|+++++++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL-G-VEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-C-CceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999864 3334444444332 2 2688999999999999999999999999


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|++|||||+..
T Consensus        80 ~id~vi~~ag~~~   92 (256)
T PRK12745         80 RIDCLVNNAGVGV   92 (256)
T ss_pred             CCCEEEECCccCC
Confidence            9999999999753

>PLN00015 protochlorophyllide reductase

Probab=99.64  E-value=1.5e-15  Score=120.92  Aligned_cols=86  Identities=21%  Similarity=0.283  Sum_probs=74.8

Q ss_pred             EEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706           84 LITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI  162 (173)
Q Consensus        84 lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  162 (173)
                      |||||++|||+++++.|+++| ++|++++|+.+..++...++...  ..++.++.+|++|.++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 99999999987776666665422  235888899999999999999999988899999


Q ss_pred             EEEcccCCC
Q 030706          163 WVFMSDLHS  171 (173)
Q Consensus       163 lVn~AG~~~  171 (173)
                      ||||||+..
T Consensus        79 lInnAG~~~   87 (308)
T PLN00015         79 LVCNAAVYL   87 (308)
T ss_pred             EEECCCcCC
Confidence            999999853

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.6e-15  Score=115.41  Aligned_cols=93  Identities=28%  Similarity=0.434  Sum_probs=80.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ++++|+++|||++++||..++++|+++|++ |++++|+.+..+....++... + .++.++.+|++++++++++++.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-G-AKAVFVQADLSDVEDCRRVVAAADE   80 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc-C-CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999998 999999877666665555432 3 2688889999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .++++|+||||||...
T Consensus        81 ~~g~id~li~~ag~~~   96 (260)
T PRK06198         81 AFGRLDALVNAAGLTD   96 (260)
T ss_pred             HhCCCCEEEECCCcCC
Confidence            9999999999999754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.64  E-value=2.4e-15  Score=116.94  Aligned_cols=84  Identities=26%  Similarity=0.296  Sum_probs=74.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|+++|||+++|||++++++|+++|++|++++++....+           ..++.++.+|++|+++++++++++.+.
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEK   74 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999998765431           125778899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        75 ~g~id~li~~Ag~~~   89 (266)
T PRK06171         75 FGRIDGLVNNAGINI   89 (266)
T ss_pred             cCCCCEEEECCcccC
Confidence            999999999999753

>PRK07069 short chain dehydrogenase; Validated

Probab=99.64  E-value=4.4e-15  Score=114.17  Aligned_cols=89  Identities=22%  Similarity=0.356  Sum_probs=75.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      ++||||++|||+++++.|+++|++|++++|+ .+..++..+++....+...+.++.+|++|.++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 555666665555443333466788999999999999999999999999


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +||||||...
T Consensus        82 ~vi~~ag~~~   91 (251)
T PRK07069         82 VLVNNAGVGS   91 (251)
T ss_pred             EEEECCCcCC
Confidence            9999999764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.64  E-value=4.5e-15  Score=114.28  Aligned_cols=94  Identities=28%  Similarity=0.448  Sum_probs=76.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFA  153 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~  153 (173)
                      ++.+|+++|||+++|||+++++.|+++|++|+++.+..+.  .+...+... ......+.+..+|+++ .++++.+++.+
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999998888877553  333333332 1110257888899998 99999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.+|++|+||||||+..
T Consensus        81 ~~~~g~id~lvnnAg~~~   98 (251)
T COG1028          81 EEEFGRIDILVNNAGIAG   98 (251)
T ss_pred             HHHcCCCCEEEECCCCCC
Confidence            999999999999999875

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.64  E-value=5.4e-15  Score=112.93  Aligned_cols=93  Identities=26%  Similarity=0.330  Sum_probs=80.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ++.+|+++|||++|+||..+++.|+++|++|++++|+++..+....++....  .++.++.+|++|++++.++++++.+.
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG--GEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999877766666555432  25888899999999999999999988


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++.+|++|||||...
T Consensus        80 ~~~id~vi~~ag~~~   94 (246)
T PRK05653         80 FGALDILVNNAGITR   94 (246)
T ss_pred             hCCCCEEEECCCcCC
Confidence            999999999998754

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.64  E-value=4.4e-15  Score=115.16  Aligned_cols=90  Identities=29%  Similarity=0.423  Sum_probs=79.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +++++||||+||||+++++.|+++|++|++++|+....++..+++... +. ++.++.+|++|.++++++++++.+.+++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH-GG-EALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999987777666666543 32 6888899999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||...
T Consensus        79 id~vi~~ag~~~   90 (263)
T PRK06181         79 IDILVNNAGITM   90 (263)
T ss_pred             CCEEEECCCccc
Confidence            999999999754

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.1e-15  Score=117.03  Aligned_cols=88  Identities=23%  Similarity=0.301  Sum_probs=76.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+|+++||||+||||++++++|+++|++|++++|+.+..++..+.+    +. .+.++++|++|+++++++++++.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----GD-RLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----cC-CeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999877655443322    22 578889999999999999999999999


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||+..
T Consensus        77 ~~d~vi~~ag~~~   89 (275)
T PRK08263         77 RLDIVVNNAGYGL   89 (275)
T ss_pred             CCCEEEECCCCcc
Confidence            9999999999864

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.64  E-value=4.4e-15  Score=114.28  Aligned_cols=89  Identities=21%  Similarity=0.398  Sum_probs=73.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ++++|+++||||++|||+++++.|+++|++|+++.+ +.+..+....+    .+ .++.++.+|++|+++++++++++.+
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~----~~-~~~~~~~~D~~~~~~~~~~~~~~~~   76 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADE----LG-DRAIALQADVTDREQVQAMFATATE   76 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH----hC-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            567899999999999999999999999999988765 34333333222    22 2588899999999999999999999


Q ss_pred             hcCC-ccEEEEcccCC
Q 030706          156 NLKY-VDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~-id~lVn~AG~~  170 (173)
                      .+|. +|++|||||+.
T Consensus        77 ~~g~~id~li~~ag~~   92 (253)
T PRK08642         77 HFGKPITTVVNNALAD   92 (253)
T ss_pred             HhCCCCeEEEECCCcc
Confidence            9987 99999999874

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.64  E-value=5.9e-15  Score=112.61  Aligned_cols=91  Identities=27%  Similarity=0.420  Sum_probs=80.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+++++||||+|+||.+++++|+++|++|++++|+++..++..+++...   .++.++.+|++|.++++.+++++.+.+
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            56799999999999999999999999999999999987777666666533   258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||+|...
T Consensus        81 ~~~d~vi~~ag~~~   94 (237)
T PRK07326         81 GGLDVLIANAGVGH   94 (237)
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999998753

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.63  E-value=5.4e-15  Score=113.24  Aligned_cols=92  Identities=21%  Similarity=0.352  Sum_probs=79.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC--HHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE--GNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~  155 (173)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..++..+++..... ..+.++.+|+++  .++++++++++.+
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGH-PEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCC-CCcceEEeeecccchHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999998887777776654332 246778999975  6788999999998


Q ss_pred             hc-CCccEEEEcccCC
Q 030706          156 NL-KYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~-g~id~lVn~AG~~  170 (173)
                      .+ +++|+||||||..
T Consensus        83 ~~~~~id~vi~~ag~~   98 (239)
T PRK08703         83 ATQGKLDGIVHCAGYF   98 (239)
T ss_pred             HhCCCCCEEEEecccc
Confidence            88 8999999999975

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.63  E-value=6.6e-15  Score=113.15  Aligned_cols=90  Identities=26%  Similarity=0.272  Sum_probs=76.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .|+++||||++|||.++++.|+++|++|+++. ++.+..++...++... + .++.++.+|++|.++++++++++.+.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA-G-GRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-C-CcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999998765 5555555555555443 2 2688999999999999999999999999


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||+..
T Consensus        80 ~id~li~~ag~~~   92 (248)
T PRK06947         80 RLDALVNNAGIVA   92 (248)
T ss_pred             CCCEEEECCccCC
Confidence            9999999999763

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.63  E-value=7.1e-15  Score=113.38  Aligned_cols=92  Identities=25%  Similarity=0.394  Sum_probs=76.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++++++|||++||||.+++++|+++|++|+++ .|+.+..++....+... + .++.++.+|++|++++.++++++.+.
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-G-GKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-C-CcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            567999999999999999999999999998775 67766666655555432 2 25888999999999999999999887


Q ss_pred             c------CCccEEEEcccCCC
Q 030706          157 L------KYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~------g~id~lVn~AG~~~  171 (173)
                      +      +++|++|||||...
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~  102 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGT  102 (254)
T ss_pred             hccccCCCCccEEEECCCCCC
Confidence            7      57999999999754

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.63  E-value=8e-15  Score=112.02  Aligned_cols=89  Identities=25%  Similarity=0.259  Sum_probs=75.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      |++||||+++|||++++++|+++|++|+++.| +.+..++...++... + .++.++.+|++|+++++++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-G-FDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-C-CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999888 544444444444332 2 25888999999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||...
T Consensus        79 id~vi~~ag~~~   90 (242)
T TIGR01829        79 IDVLVNNAGITR   90 (242)
T ss_pred             CcEEEECCCCCC
Confidence            999999999764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=6.8e-15  Score=112.63  Aligned_cols=91  Identities=29%  Similarity=0.433  Sum_probs=79.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.+|+++||||+++||.++++.|++.|++|+++ +|+.+..++....+... + .++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-G-GDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            567899999999999999999999999999998 89877766666665542 2 36888999999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ++++|+||||+|..
T Consensus        81 ~~~id~vi~~ag~~   94 (247)
T PRK05565         81 FGKIDILVNNAGIS   94 (247)
T ss_pred             hCCCCEEEECCCcC
Confidence            99999999999976

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.63  E-value=8.7e-15  Score=113.15  Aligned_cols=88  Identities=28%  Similarity=0.404  Sum_probs=77.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|+++||||+++||++++++|+++|++|++++|+.+..+...+.+.    +.++.++.+|+.|.+++.++++++.+.+++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999998877666555542    225888999999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|++|||+|...
T Consensus        78 ~d~vi~~ag~~~   89 (257)
T PRK07074         78 VDVLVANAGAAR   89 (257)
T ss_pred             CCEEEECCCCCC
Confidence            999999999864

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.62  E-value=5e-15  Score=115.73  Aligned_cols=83  Identities=30%  Similarity=0.364  Sum_probs=72.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |++|||||+||||++++++|+++|++|++++|+.+..++.    ..  .  .+.++.+|++|.++++++++++.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~--~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AA--A--GFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH--C--CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999987654432    11  1  35678999999999999999999999999


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+||||||+..
T Consensus        74 d~vi~~ag~~~   84 (274)
T PRK05693         74 DVLINNAGYGA   84 (274)
T ss_pred             CEEEECCCCCC
Confidence            99999999753

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.62  E-value=1.3e-14  Score=110.91  Aligned_cols=93  Identities=29%  Similarity=0.381  Sum_probs=77.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ++.+|+++|||++|+||.+++++|+++|++|+++.++... .+....++... + .++.++.+|+++.+++.++++++.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-G-GKALAVQGDVSDAESVERAVDEAKA   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999888876543 34444444332 2 3688889999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .++++|+||||||...
T Consensus        80 ~~~~id~vi~~ag~~~   95 (248)
T PRK05557         80 EFGGVDILVNNAGITR   95 (248)
T ss_pred             HcCCCCEEEECCCcCC
Confidence            9999999999999754

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.62  E-value=8.6e-15  Score=113.32  Aligned_cols=90  Identities=28%  Similarity=0.399  Sum_probs=77.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ++++|+++||||+|+||+.++++|+++|++|++++|+.+..++..++..    ..++.++.+|++|+++++.+++++.+.
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999998766554443332    225788899999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ++++|+||||||..
T Consensus        84 ~~~~d~vi~~ag~~   97 (264)
T PRK12829         84 FGGLDVLVNNAGIA   97 (264)
T ss_pred             hCCCCEEEECCCCC
Confidence            99999999999986

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.61  E-value=7.1e-15  Score=114.86  Aligned_cols=89  Identities=29%  Similarity=0.396  Sum_probs=76.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc--
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL--  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--  157 (173)
                      |+.++||||+.|||++.+++|+++|.+|++++|+.++++...+++.+.++ ..+..+.+|+++.+.+   .+.+.+..  
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~---ye~i~~~l~~  124 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEV---YEKLLEKLAG  124 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchh---HHHHHHHhcC
Confidence            48999999999999999999999999999999999999999999999877 4899999999988763   33333333  


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      ..|-+||||+|..++
T Consensus       125 ~~VgILVNNvG~~~~  139 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYD  139 (312)
T ss_pred             CceEEEEecccccCC
Confidence            257789999999874

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.61  E-value=1.1e-14  Score=111.60  Aligned_cols=88  Identities=19%  Similarity=0.287  Sum_probs=75.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      |+++||||+|+||++++++|+++|++|+++ .|+.+..++...++... + .++.++.+|++|+++++++++++.+.+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-G-GKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-C-CeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999874 56666666666655443 2 25888999999999999999999999999


Q ss_pred             ccEEEEcccCC
Q 030706          160 VDIWVFMSDLH  170 (173)
Q Consensus       160 id~lVn~AG~~  170 (173)
                      +|+||||||..
T Consensus        80 id~vi~~ag~~   90 (247)
T PRK09730         80 LAALVNNAGIL   90 (247)
T ss_pred             CCEEEECCCCC
Confidence            99999999975

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.61  E-value=9.1e-15  Score=114.31  Aligned_cols=87  Identities=24%  Similarity=0.411  Sum_probs=75.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      .|++|||||+||||++++++|+++|++|++++|+.+..++..+.    .+. ++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~----~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR----YGD-RLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccC-ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999987665443332    222 5888999999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||+..
T Consensus        77 id~vi~~ag~~~   88 (276)
T PRK06482         77 IDVVVSNAGYGL   88 (276)
T ss_pred             CCEEEECCCCCC
Confidence            999999999864

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.61  E-value=1.5e-14  Score=111.39  Aligned_cols=90  Identities=28%  Similarity=0.406  Sum_probs=78.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|++||||++|+||++++++|+++|++|++++|+.+..+....++... + .++.++.+|++|.++++++++++.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-G-GSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999987766666555432 2 26888999999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||+..
T Consensus        79 ~d~vi~~a~~~~   90 (255)
T TIGR01963        79 LDILVNNAGIQH   90 (255)
T ss_pred             CCEEEECCCCCC
Confidence            999999999754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.61  E-value=2.5e-14  Score=109.97  Aligned_cols=92  Identities=28%  Similarity=0.382  Sum_probs=75.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.++++|||||+++||++++++|+++|++|++..++ .+...+....+... +. ++.++.+|++++++++++++++.+.
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-GG-EGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-CC-eeEEEEeccCCHHHHHHHHHHHHHH
Confidence            568999999999999999999999999999887754 33344444444332 22 5778899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        82 ~~~~d~vi~~ag~~~   96 (252)
T PRK06077         82 YGVADILVNNAGLGL   96 (252)
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999744

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.60  E-value=1.5e-14  Score=111.51  Aligned_cols=85  Identities=26%  Similarity=0.479  Sum_probs=74.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      ++++||||+||||.++++.|+++|++|++++|+.+.+++....+    + .++.++.+|++|.++++++++++.+.++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----G-DNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----c-cceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999887655544332    2 258889999999999999999999999999


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+||||||+.
T Consensus        76 d~vi~~ag~~   85 (248)
T PRK10538         76 DVLVNNAGLA   85 (248)
T ss_pred             CEEEECCCcc
Confidence            9999999975

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.8e-14  Score=109.34  Aligned_cols=92  Identities=23%  Similarity=0.340  Sum_probs=75.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC----hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +.+++++||||+||||+++++.|+++|++|+++++.    .+..++...++... + .++.++.+|++|.++++++++++
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-G-GKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHHHHHHHHH
Confidence            567899999999999999999999999999987653    33333333444332 2 26888999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.++++|+||||||+..
T Consensus        82 ~~~~~~~d~vi~~ag~~~   99 (249)
T PRK12827         82 VEEFGRLDILVNNAGIAT   99 (249)
T ss_pred             HHHhCCCCEEEECCCCCC
Confidence            999999999999999865

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.6e-14  Score=109.72  Aligned_cols=87  Identities=22%  Similarity=0.286  Sum_probs=74.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |+++||||++|||+++++.|+++|++|++++|+++..++..+++....+ .++.++.+|++|+++++++++++.+   .+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA-VAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcC-CeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            6899999999999999999999999999999998877776666655433 3789999999999999999988754   46


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |++|||||...
T Consensus        78 d~vv~~ag~~~   88 (243)
T PRK07102         78 DIVLIAVGTLG   88 (243)
T ss_pred             CEEEECCcCCC
Confidence            99999999754

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.59  E-value=1.1e-14  Score=108.36  Aligned_cols=85  Identities=33%  Similarity=0.378  Sum_probs=73.3

Q ss_pred             CCCEEEEEcCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH-h
Q 030706           79 PPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK-N  156 (173)
Q Consensus        79 ~~k~~lItGa~-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~  156 (173)
                      +.|.++|||++ ||||.+++++|.+.|+.|+.+.|..+...++..+    .   .+..+.+||++++++..+..++.+ .
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~----~---gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ----F---GLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh----h---CCeeEEeccCChHHHHHHHHHHhhCC
Confidence            45789999865 8999999999999999999999988776554332    1   377889999999999999999988 7


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      +|.+|.|+||||..
T Consensus        79 ~Gkld~L~NNAG~~   92 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQS   92 (289)
T ss_pred             CCceEEEEcCCCCC
Confidence            89999999999975

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.59  E-value=1.5e-14  Score=107.03  Aligned_cols=88  Identities=26%  Similarity=0.423  Sum_probs=68.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh---hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA---ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +||||||.||||..++++|+++| .+|++++|+.   ...++..++++.. + .++.++.+|++|+++++++++++.+.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-g-~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-G-ARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-T--EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-C-CceeeeccCccCHHHHHHHHHHHHhcc
Confidence            79999999999999999999998 5899999983   2344567777665 3 379999999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      ++|++|||+||+..
T Consensus        80 ~~i~gVih~ag~~~   93 (181)
T PF08659_consen   80 GPIDGVIHAAGVLA   93 (181)
T ss_dssp             S-EEEEEE------
T ss_pred             CCcceeeeeeeeec
Confidence            99999999999864

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.58  E-value=3.5e-14  Score=108.55  Aligned_cols=87  Identities=21%  Similarity=0.280  Sum_probs=74.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      ++||||++|||+++++.|+++|++|+++++. .+..++..+++... + .++.++.+|++|.++++++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-G-GNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-C-CeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999998865 34455555555543 2 2688999999999999999999999999999


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      ++|||||+..
T Consensus        79 ~li~~ag~~~   88 (239)
T TIGR01831        79 GVVLNAGITR   88 (239)
T ss_pred             EEEECCCCCC
Confidence            9999999864

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.58  E-value=3e-14  Score=109.67  Aligned_cols=84  Identities=26%  Similarity=0.303  Sum_probs=73.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++|||++++||.+++++|+++|++|++++|+.         +.. .+ .++.++++|++|+++++++++++.+.
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ-ED-YPFATFVLDVSDAAAVAQVCQRLLAE   73 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh-cC-CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999875         111 12 25888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        74 ~~~id~vi~~ag~~~   88 (252)
T PRK08220         74 TGPLDVLVNAAGILR   88 (252)
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999754

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.58  E-value=4.2e-14  Score=108.22  Aligned_cols=89  Identities=28%  Similarity=0.312  Sum_probs=73.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      |+++|||++++||++++++|+++|++|++++|+.. ..++....+..  ...++.++.+|++|.++++++++++.+.+++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999853 12222222211  1236888999999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||...
T Consensus        81 id~vi~~ag~~~   92 (245)
T PRK12824         81 VDILVNNAGITR   92 (245)
T ss_pred             CCEEEECCCCCC
Confidence            999999999753

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=6.3e-14  Score=107.07  Aligned_cols=92  Identities=26%  Similarity=0.413  Sum_probs=74.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.+|++|||||+|+||.+++++|+++|++|+++.++... .+.....+... + .++.++.+|++|.++++++++++.+.
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-G-RRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-C-CceEEEECCcCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999998887765443 33333333332 2 25888999999999999999999988


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++.+|++|||||...
T Consensus        82 ~~~id~vi~~ag~~~   96 (249)
T PRK12825         82 FGRIDILVNNAGIFE   96 (249)
T ss_pred             cCCCCEEEECCccCC
Confidence            999999999999654

>PRK08324 short chain dehydrogenase; Validated

Probab=99.57  E-value=3.8e-14  Score=123.88  Aligned_cols=92  Identities=27%  Similarity=0.340  Sum_probs=81.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.||+++||||+||||+++++.|+++|++|++++|+.+..+....++...   .++.++.+|++|+++++++++++.+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999987776666655432   25888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus       496 ~g~iDvvI~~AG~~~  510 (681)
T PRK08324        496 FGGVDIVVSNAGIAI  510 (681)
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999754

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=6.3e-14  Score=107.01  Aligned_cols=90  Identities=29%  Similarity=0.341  Sum_probs=77.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++|||++++||.++++.|+++|++|++++|+++..+...+.+... +  ++.++.+|+++.++++++++++.+.+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-G--NIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C--CeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999887665554444322 2  47888999999999999999998888


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      +.+|.+|+|+|..
T Consensus        80 ~~id~ii~~ag~~   92 (238)
T PRK05786         80 NAIDGLVVTVGGY   92 (238)
T ss_pred             CCCCEEEEcCCCc
Confidence            9999999999864

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.57  E-value=3.2e-14  Score=108.33  Aligned_cols=94  Identities=18%  Similarity=0.218  Sum_probs=85.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-----CEEEEEecChhhHHHHHHHHHHHhC--CceEEEEEeeCCCHHHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG-----DNVIICSRSAERVDSAVQSLREEFG--EQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G-----~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      ..|+++|||+++|||+++|.+|++..     .++++++|+.++.++.+..+.+-++  ..++.++.+|+++..++.++..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            35899999999999999999999864     2578899999999999999998777  4578999999999999999999


Q ss_pred             HHHHhcCCccEEEEcccCCCC
Q 030706          152 FAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       152 ~~~~~~g~id~lVn~AG~~~~  172 (173)
                      ++.++|.++|.+..|||++..
T Consensus        82 di~~rf~~ld~iylNAg~~~~  102 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPN  102 (341)
T ss_pred             HHHHHhhhccEEEEccccCCC
Confidence            999999999999999998753

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.56  E-value=5.6e-14  Score=113.90  Aligned_cols=92  Identities=18%  Similarity=0.228  Sum_probs=72.7

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHcCCEEEEEecChhhHH------------HHHHHHHHHhCCceEEEEEeeCCCH
Q 030706           78 LPPYNVLITGSTKGIGYA--LAKEFLKAGDNVIICSRSAERVD------------SAVQSLREEFGEQHVWGTKCDVSEG  143 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~a--ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dv~~~  143 (173)
                      ..+|++||||+++|||.+  +++.| +.|++|+++++..+..+            ...+.+. ..+. .+..+.+|+++.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~-~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGL-YAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCC-ceEEEEcCCCCH
Confidence            346999999999999999  89999 99999888885432211            1222332 2232 477889999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcccCCCC
Q 030706          144 NEVADLVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       144 ~~v~~~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      ++++++++++.+.+|+||+||||+|...+
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r  144 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRR  144 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCC
Confidence            99999999999999999999999998743

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.55  E-value=3.9e-14  Score=108.82  Aligned_cols=83  Identities=30%  Similarity=0.539  Sum_probs=74.9

Q ss_pred             cCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-CCccEE
Q 030706           87 GST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-KYVDIW  163 (173)
Q Consensus        87 Ga~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~l  163 (173)
                      |++  +|||+++|+.|+++|++|++++|+.+..++..+++.+..+. +  ++.+|++++++++++++++.+.+ |+||+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~-~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA-E--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS-E--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC-c--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  99999999999999999999999999887888888877664 4  48999999999999999999999 999999


Q ss_pred             EEcccCCCC
Q 030706          164 VFMSDLHSS  172 (173)
Q Consensus       164 Vn~AG~~~~  172 (173)
                      |||+|...+
T Consensus        78 V~~a~~~~~   86 (241)
T PF13561_consen   78 VNNAGISPP   86 (241)
T ss_dssp             EEEEESCTG
T ss_pred             Eeccccccc
Confidence            999998753

...

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=8.6e-14  Score=116.16  Aligned_cols=90  Identities=21%  Similarity=0.287  Sum_probs=73.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++|||+++|||++++++|+++|++|+++++....  +...++....+   ..++.+|++|.++++++++++.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRVG---GTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHcC---CeEEEEeCCCHHHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999885321  11222222222   346789999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus       282 ~g~id~vi~~AG~~~  296 (450)
T PRK08261        282 HGGLDIVVHNAGITR  296 (450)
T ss_pred             CCCCCEEEECCCcCC
Confidence            999999999999864

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.52  E-value=3.1e-14  Score=113.12  Aligned_cols=94  Identities=18%  Similarity=0.260  Sum_probs=62.5

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHH---------HHhCC----ceEEEEEeeC
Q 030706           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR---------EEFGE----QHVWGTKCDV  140 (173)
Q Consensus        76 ~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~---------~~~~~----~~~~~~~~Dv  140 (173)
                      ..++||++||||++  +|||+++|+.|+++|++|++.++.+ .++.......         ...+.    .++..+..|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            34789999999996  9999999999999999999987542 0100000000         00000    0011112233


Q ss_pred             CCH------------------HHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          141 SEG------------------NEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       141 ~~~------------------~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      ++.                  ++++++++++.+++|++|+||||||+.
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~  130 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANS  130 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcC
Confidence            222                  468999999999999999999999874

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.52  E-value=2.3e-13  Score=103.62  Aligned_cols=87  Identities=34%  Similarity=0.550  Sum_probs=73.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +||||++++||..++++|+++|++|++++|+. +..+.....+... + .++.++.+|++|+++++++++++.+.++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY-G-VKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-C-CceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999998875 3444444445433 2 2588899999999999999999999999999


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +||||||...
T Consensus        79 ~vi~~ag~~~   88 (239)
T TIGR01830        79 ILVNNAGITR   88 (239)
T ss_pred             EEEECCCCCC
Confidence            9999999754

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.51  E-value=3.6e-13  Score=101.24  Aligned_cols=93  Identities=24%  Similarity=0.391  Sum_probs=82.2

Q ss_pred             CCCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .++||++||+|-  ..+|++.||+.|.++|+++.+++.++ ++++.++++.+..+.  ...++|||++.++++++|+++.
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s--~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS--DLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC--CeEEecCCCCHHHHHHHHHHHH
Confidence            489999999995  47999999999999999999999887 677777777766554  5678999999999999999999


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                      +++|.+|+|||+-|+..+
T Consensus        80 ~~~g~lD~lVHsIaFa~k   97 (259)
T COG0623          80 KKWGKLDGLVHSIAFAPK   97 (259)
T ss_pred             HhhCcccEEEEEeccCCh
Confidence            999999999999988763

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.51  E-value=2.8e-13  Score=104.57  Aligned_cols=84  Identities=23%  Similarity=0.284  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|++|||||+||||++++++|++.|++|++++|+.+..++........ +. ++.++.+|++|+++++++++      ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-GL-ALRVEKLDLTDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cceEEEeeCCCHHHHHHHhc------CC
Confidence            578999999999999999999999999999999876665554444332 22 58888999999998877653      37


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||+..
T Consensus        74 id~vi~~ag~~~   85 (257)
T PRK09291         74 VDVLLNNAGIGE   85 (257)
T ss_pred             CCEEEECCCcCC
Confidence            999999999754

>PRK12742 oxidoreductase; Provisional

Probab=99.50  E-value=2.9e-13  Score=103.23  Aligned_cols=83  Identities=24%  Similarity=0.380  Sum_probs=64.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++|++|||||++|||+++++.|+++|++|+++++. .+..++...    ..   .+.++.+|++|.+++.++++    .
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----~~---~~~~~~~D~~~~~~~~~~~~----~   72 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ----ET---GATAVQTDSADRDAVIDVVR----K   72 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH----Hh---CCeEEecCCCCHHHHHHHHH----H
Confidence            678999999999999999999999999999888764 333333222    21   24567899999998877664    3


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        73 ~~~id~li~~ag~~~   87 (237)
T PRK12742         73 SGALDILVVNAGIAV   87 (237)
T ss_pred             hCCCcEEEECCCCCC
Confidence            578999999999753

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.50  E-value=4.1e-13  Score=102.80  Aligned_cols=84  Identities=24%  Similarity=0.273  Sum_probs=69.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++|||++++||.++++.|+++|++|++++|+.+..++....+       .+.++.+|+++.++++++++.    
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~----   74 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA----   74 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH----
Confidence            367899999999999999999999999999999999876654433221       245678999999988887765    


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||...
T Consensus        75 ~~~~d~vi~~ag~~~   89 (245)
T PRK07060         75 AGAFDGLVNCAGIAS   89 (245)
T ss_pred             hCCCCEEEECCCCCC
Confidence            578999999999754

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.5e-13  Score=106.38  Aligned_cols=81  Identities=21%  Similarity=0.251  Sum_probs=62.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+.....+   .. .. ..  ..++.+|++|.+++++       
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~-~~--~~~~~~D~~~~~~~~~-------   75 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE-SP--NEWIKWECGKEESLDK-------   75 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc-CC--CeEEEeeCCCHHHHHH-------
Confidence            34678999999999999999999999999999999997622111   11 11 11  2567899999987654       


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                      .++++|+||||||+.
T Consensus        76 ~~~~iDilVnnAG~~   90 (245)
T PRK12367         76 QLASLDVLILNHGIN   90 (245)
T ss_pred             hcCCCCEEEECCccC
Confidence            357899999999975

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.8e-13  Score=105.01  Aligned_cols=81  Identities=27%  Similarity=0.435  Sum_probs=67.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      ++++||||++|||++++++|+++|++|++++|+.+..++..+    ..  .++.++.+|++|.++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~D~~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QS--ANIFTLAFDVTDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hc--CCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence            689999999999999999999999999999998766544322    21  2478889999999999999887642   47


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |++|||||..
T Consensus        73 d~~i~~ag~~   82 (240)
T PRK06101         73 ELWIFNAGDC   82 (240)
T ss_pred             CEEEEcCccc
Confidence            9999999864

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.3e-13  Score=103.42  Aligned_cols=82  Identities=22%  Similarity=0.331  Sum_probs=68.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |+++|||+++|||.+++++|+++|++|++++|+++..++. .++    .  ++.++.+|++|+++++++++++.+  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~----~--~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL----P--GVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc----c--ccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            6899999999999999999999999999999987654432 111    1  466778999999999999988754  489


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+||||||+..
T Consensus        73 d~vi~~ag~~~   83 (225)
T PRK08177         73 DLLFVNAGISG   83 (225)
T ss_pred             CEEEEcCcccC
Confidence            99999999863

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.48  E-value=6.4e-13  Score=96.02  Aligned_cols=89  Identities=25%  Similarity=0.329  Sum_probs=72.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH---HHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA---VQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      |+++||||++|||.+++++|+++|+ .|++++|+.+..+..   ..++... + .++.++.+|++++++++++++++.+.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL-G-AEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999996 688888876543322   2333322 2 36888899999999999999999988


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        79 ~~~id~li~~ag~~~   93 (180)
T smart00822       79 LGPLRGVIHAAGVLD   93 (180)
T ss_pred             cCCeeEEEEccccCC
Confidence            999999999999753

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.48  E-value=3.5e-13  Score=102.63  Aligned_cols=78  Identities=21%  Similarity=0.358  Sum_probs=65.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .++||||++|||+++++.|+++|++|++++|+.+..++..+++       .+.++.+|++|+++++++++++.+   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence            4899999999999999999999999999999877665544332       245778999999999999887643   699


Q ss_pred             EEEEcccC
Q 030706          162 IWVFMSDL  169 (173)
Q Consensus       162 ~lVn~AG~  169 (173)
                      +||||||.
T Consensus        72 ~lv~~ag~   79 (223)
T PRK05884         72 TIVNVPAP   79 (223)
T ss_pred             EEEECCCc
Confidence            99999985

>PRK08264 short chain dehydrogenase; Validated

Probab=99.48  E-value=5e-13  Score=102.11  Aligned_cols=80  Identities=29%  Similarity=0.388  Sum_probs=68.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+.+|+++||||+|+||++++++|+++|+ +|++++|+.+..++        .+ .++.++.+|++|.++++++++.   
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~-~~~~~~~~D~~~~~~~~~~~~~---   70 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LG-PRVVPLQLDVTDPASVAAAAEA---   70 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cC-CceEEEEecCCCHHHHHHHHHh---
Confidence            36789999999999999999999999998 99999998765432        22 2588899999999998887764   


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                       ++++|+||||||+
T Consensus        71 -~~~id~vi~~ag~   83 (238)
T PRK08264         71 -ASDVTILVNNAGI   83 (238)
T ss_pred             -cCCCCEEEECCCc
Confidence             4689999999998

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.48  E-value=3.7e-13  Score=100.99  Aligned_cols=92  Identities=26%  Similarity=0.395  Sum_probs=71.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-CCEEE-EEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKA-GDNVI-ICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~-G~~V~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ..|.++||||++|||+.++++|.+. |-.++ .+.|+++...+..+.+..  ...+++.+++||++.++++.+++++.+-
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~--~d~rvHii~Ldvt~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSK--SDSRVHIIQLDVTCDESIDNFVQEVEKI   79 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhc--cCCceEEEEEecccHHHHHHHHHHHHhh
Confidence            3467999999999999999999976 55554 455667765222222211  2348999999999999999999999887


Q ss_pred             --cCCccEEEEcccCCCC
Q 030706          157 --LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 --~g~id~lVn~AG~~~~  172 (173)
                        ..++|+||||||+..+
T Consensus        80 Vg~~GlnlLinNaGi~~~   97 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGIALS   97 (249)
T ss_pred             cccCCceEEEeccceeee
Confidence              4689999999998753

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.47  E-value=5.2e-13  Score=102.45  Aligned_cols=83  Identities=20%  Similarity=0.267  Sum_probs=67.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH-HHHhc---
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF-AQKNL---  157 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-~~~~~---  157 (173)
                      +++||||+||||++++++|+++|++|++++|+.+..  .    ....+ .++.++.+|++|.+++++++++ +.+.+   
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   75 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAAAG-ERLAEVELDLSDAAAAAAWLAGDLLAAFVDG   75 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhccC-CeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence            799999999999999999999999999999976431  1    11122 3688899999999999998877 55544   


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|++|||||+..
T Consensus        76 ~~~~~~v~~ag~~~   89 (243)
T PRK07023         76 ASRVLLINNAGTVE   89 (243)
T ss_pred             CCceEEEEcCcccC
Confidence            47999999999864

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.47  E-value=5.5e-13  Score=101.36  Aligned_cols=81  Identities=31%  Similarity=0.428  Sum_probs=68.2

Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEE
Q 030706           84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIW  163 (173)
Q Consensus        84 lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l  163 (173)
                      +|||+++|||++++++|+++|++|++++|+.+..++...++..  + .++.++.+|++|++++++++++    ++++|+|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~----~~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--G-APVRTAALDITDEAAVDAFFAE----AGPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--C-CceEEEEccCCCHHHHHHHHHh----cCCCCEE
Confidence            6999999999999999999999999999987766665555431  2 3588899999999999888875    4789999


Q ss_pred             EEcccCCC
Q 030706          164 VFMSDLHS  171 (173)
Q Consensus       164 Vn~AG~~~  171 (173)
                      |||||+..
T Consensus        74 i~~ag~~~   81 (230)
T PRK07041         74 VITAADTP   81 (230)
T ss_pred             EECCCCCC
Confidence            99999854

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.47  E-value=6.7e-13  Score=103.99  Aligned_cols=91  Identities=24%  Similarity=0.248  Sum_probs=77.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+|.++|||+.+|+|+.+|++|.+.|.+|++.+..++..+....+..    ..+...+++||+++++++++.+.+.+..
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999999987777666655543    3478888999999999999998888766


Q ss_pred             --CCccEEEEcccCCCC
Q 030706          158 --KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 --g~id~lVn~AG~~~~  172 (173)
                        .++.+||||||+...
T Consensus       103 ~~~gLwglVNNAGi~~~  119 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGF  119 (322)
T ss_pred             ccccceeEEeccccccc
Confidence              359999999998643

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.46  E-value=8.8e-13  Score=101.48  Aligned_cols=86  Identities=22%  Similarity=0.349  Sum_probs=68.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      |+++||||+||||++++++|+++|++|++++|+. +..++    +....+ .++.++.+|++|.++++++++++.+.++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTK----LAEQYN-SNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHH----HHhccC-CceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999999999999976 32222    222222 25888999999999999999998877653


Q ss_pred             --cc--EEEEcccCCC
Q 030706          160 --VD--IWVFMSDLHS  171 (173)
Q Consensus       160 --id--~lVn~AG~~~  171 (173)
                        ++  ++|||||...
T Consensus        77 ~~~~~~~~v~~ag~~~   92 (251)
T PRK06924         77 DNVSSIHLINNAGMVA   92 (251)
T ss_pred             ccCCceEEEEcceecc
Confidence              22  8999999753

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.46  E-value=8.3e-13  Score=100.54  Aligned_cols=79  Identities=32%  Similarity=0.307  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+|+++||||+++||++++++|+++|++|++++|+.+..          ..   ..++.+|++|.++++++++++.+.+ 
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~~---~~~~~~D~~~~~~~~~~~~~~~~~~-   67 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------FP---GELFACDLADIEQTAATLAQINEIH-   67 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------cC---ceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence            578999999999999999999999999999999976430          11   2367899999999999999988876 


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||+..
T Consensus        68 ~~d~vi~~ag~~~   80 (234)
T PRK07577         68 PVDAIVNNVGIAL   80 (234)
T ss_pred             CCcEEEECCCCCC
Confidence            6899999999864

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.45  E-value=6.9e-13  Score=103.83  Aligned_cols=92  Identities=24%  Similarity=0.270  Sum_probs=85.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      +.++||||++|||+++|..+..+|++|.++.|+..++.++.+++........+.+..+|+.|.+++..+++++.+..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            68999999999999999999999999999999999999999999877665458899999999999999999999999999


Q ss_pred             cEEEEcccCCCC
Q 030706          161 DIWVFMSDLHSS  172 (173)
Q Consensus       161 d~lVn~AG~~~~  172 (173)
                      |.+|+|||+.-+
T Consensus       114 d~l~~cAG~~v~  125 (331)
T KOG1210|consen  114 DNLFCCAGVAVP  125 (331)
T ss_pred             ceEEEecCcccc
Confidence            999999998643

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.44  E-value=3.2e-13  Score=97.78  Aligned_cols=85  Identities=25%  Similarity=0.243  Sum_probs=71.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.|+.+++||+..|||+++++.|++.|++|+.+.|+++.+..++++-    +. .+..+..|+++++.+++.+    ..
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----p~-~I~Pi~~Dls~wea~~~~l----~~   74 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----PS-LIIPIVGDLSAWEALFKLL----VP   74 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----Cc-ceeeeEecccHHHHHHHhh----cc
Confidence            478999999999999999999999999999999999998877766542    32 4888899999877666554    34


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      .+.+|+||||||+.
T Consensus        75 v~pidgLVNNAgvA   88 (245)
T KOG1207|consen   75 VFPIDGLVNNAGVA   88 (245)
T ss_pred             cCchhhhhccchhh
Confidence            47899999999985

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.43  E-value=1.2e-12  Score=107.74  Aligned_cols=82  Identities=24%  Similarity=0.379  Sum_probs=65.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||+||||+++++.|+++|++|++++|+.+..++..   ... . ..+..+.+|++|++++++.       
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~-~-~~v~~v~~Dvsd~~~v~~~-------  242 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE-D-LPVKTLHWQVGQEAALAEL-------  242 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc-C-CCeEEEEeeCCCHHHHHHH-------
Confidence            467899999999999999999999999999999999876543221   111 1 1366788999999877654       


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ++++|+||||||+.
T Consensus       243 l~~IDiLInnAGi~  256 (406)
T PRK07424        243 LEKVDILIINHGIN  256 (406)
T ss_pred             hCCCCEEEECCCcC
Confidence            35899999999975

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.43  E-value=7.6e-13  Score=100.89  Aligned_cols=76  Identities=26%  Similarity=0.303  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++|||+++|||++++++|+++|++|++++|+....      .    . .++.++.+|++++      ++++.+.+
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~----~-~~~~~~~~D~~~~------~~~~~~~~   65 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L----S-GNFHFLQLDLSDD------LEPLFDWV   65 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c----C-CcEEEEECChHHH------HHHHHHhh
Confidence            6789999999999999999999999999999999875321      0    1 2578889999887      45555667


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      +++|+||||||+.
T Consensus        66 ~~id~lv~~ag~~   78 (235)
T PRK06550         66 PSVDILCNTAGIL   78 (235)
T ss_pred             CCCCEEEECCCCC
Confidence            8999999999975

>PRK08017 oxidoreductase; Provisional

Probab=99.43  E-value=2e-12  Score=99.66  Aligned_cols=83  Identities=20%  Similarity=0.190  Sum_probs=69.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-CC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-KY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~  159 (173)
                      |+++||||+|+||+++++.|+++|++|++++|+.+..+..    ...    .+..+.+|++|.++++.+++.+.+.. +.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~~----~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NSL----GFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----HhC----CCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999987665432    111    35678999999999999999887654 78


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|++|||||+..
T Consensus        75 ~~~ii~~ag~~~   86 (256)
T PRK08017         75 LYGLFNNAGFGV   86 (256)
T ss_pred             CeEEEECCCCCC
Confidence            999999999754

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.42  E-value=1.6e-12  Score=125.12  Aligned_cols=91  Identities=21%  Similarity=0.238  Sum_probs=72.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChh-----------------------------------------
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAE-----------------------------------------  115 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~-----------------------------------------  115 (173)
                      -+++++|||||++|||++++++|+++ |++|++++|+..                                         
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            46899999999999999999999998 699999999820                                         


Q ss_pred             ------hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          116 ------RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       116 ------~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                            ...+..+.+.. .+ .++.++.+||+|.++++++++++.+. ++||+||||||+..
T Consensus      2075 ~~~~~~ei~~~la~l~~-~G-~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~ 2133 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKA-AG-ASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA 2133 (2582)
T ss_pred             ccchhHHHHHHHHHHHh-cC-CcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC
Confidence                  00111222222 23 26889999999999999999999877 68999999999865

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.40  E-value=3.7e-12  Score=108.09  Aligned_cols=89  Identities=22%  Similarity=0.281  Sum_probs=71.6

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh----C---CceEEEEEeeCCCHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF----G---EQHVWGTKCDVSEGNEVA  147 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~---~~~~~~~~~Dv~~~~~v~  147 (173)
                      ..+.+||+++||||+|+||++++++|++.|++|++++|+.+..+....++....    +   ..++.++.+|++|.++++
T Consensus        75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~  154 (576)
T PLN03209         75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG  154 (576)
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence            345678999999999999999999999999999999999887766655543210    1   125888999999998876


Q ss_pred             HHHHHHHHhcCCccEEEEcccCC
Q 030706          148 DLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       148 ~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      +.       ++++|+||||+|..
T Consensus       155 ~a-------LggiDiVVn~AG~~  170 (576)
T PLN03209        155 PA-------LGNASVVICCIGAS  170 (576)
T ss_pred             HH-------hcCCCEEEEccccc
Confidence            53       46899999999975

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.39  E-value=2.9e-12  Score=97.15  Aligned_cols=80  Identities=24%  Similarity=0.324  Sum_probs=66.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |+++|||++++||++++++|+++|++|++++|+.+..++.    ...    .+.++.+|+++.++++++++++..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~----~~~----~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL----QAL----GAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH----Hhc----cceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            6899999999999999999999999999999987654432    221    245789999999999998877632  479


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |++|||+|..
T Consensus        72 d~vi~~ag~~   81 (222)
T PRK06953         72 DAAVYVAGVY   81 (222)
T ss_pred             CEEEECCCcc
Confidence            9999999986

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.38  E-value=4.2e-12  Score=101.53  Aligned_cols=85  Identities=13%  Similarity=0.030  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+|++|||||+|+||.++++.|+++|++|+++.|+....+.....+.......++.++.+|++|.++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4689999999999999999999999999999988876543332222111111358889999999998888774       


Q ss_pred             CccEEEEcccCC
Q 030706          159 YVDIWVFMSDLH  170 (173)
Q Consensus       159 ~id~lVn~AG~~  170 (173)
                      ++|+||||||..
T Consensus        77 ~~d~vih~A~~~   88 (325)
T PLN02989         77 GCETVFHTASPV   88 (325)
T ss_pred             CCCEEEEeCCCC
Confidence            589999999964

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.37  E-value=5.6e-12  Score=95.36  Aligned_cols=81  Identities=25%  Similarity=0.377  Sum_probs=66.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      .|+++||||+|+||+++++.|+++ ++|++++|+.+..++..+.    ..  .+.++.+|++|+++++++++++    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAE----LP--GATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHH----hc--cceEEecCCCCHHHHHHHHHhc----CC
Confidence            478999999999999999999999 9999999987654433222    12  3678899999999988877653    58


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+|||+||...
T Consensus        72 id~vi~~ag~~~   83 (227)
T PRK08219         72 LDVLVHNAGVAD   83 (227)
T ss_pred             CCEEEECCCcCC
Confidence            999999999754

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.36  E-value=5.7e-12  Score=101.15  Aligned_cols=83  Identities=24%  Similarity=0.246  Sum_probs=65.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ++++|+++||||+|+||.++++.|+++|  ++|++++|+..........+    ...++.++.+|++|.+++.++++   
T Consensus         1 ~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~---   73 (324)
T TIGR03589         1 MFNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR---   73 (324)
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh---
Confidence            3578999999999999999999999986  78999998765433322222    12358889999999998887764   


Q ss_pred             HhcCCccEEEEcccCC
Q 030706          155 KNLKYVDIWVFMSDLH  170 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~  170 (173)
                          ++|+|||+||..
T Consensus        74 ----~iD~Vih~Ag~~   85 (324)
T TIGR03589        74 ----GVDYVVHAAALK   85 (324)
T ss_pred             ----cCCEEEECcccC
Confidence                589999999974

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.36  E-value=5.8e-12  Score=96.09  Aligned_cols=77  Identities=25%  Similarity=0.343  Sum_probs=60.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++++||||++|||++++++|+++|  ..|++.+|+....          ....++.++++|++|.++++++.    +.++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~~~~~~~~----~~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDEAEIKQLS----EQFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCHHHHHHHH----HhcC
Confidence            479999999999999999999985  5676666654321          11236888999999999988753    4568


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||+..
T Consensus        67 ~id~li~~aG~~~   79 (235)
T PRK09009         67 QLDWLINCVGMLH   79 (235)
T ss_pred             CCCEEEECCcccc
Confidence            9999999999874

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.35  E-value=7.6e-12  Score=101.19  Aligned_cols=85  Identities=18%  Similarity=0.113  Sum_probs=67.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||+|+||.++++.|+++|++|++++|+..........+..  . .++.++.+|++|.+++.+++++.    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--A-KKIEDHFGDIRDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--c-CCceEEEccCCCHHHHHHHHhhc----
Confidence            5678999999999999999999999999999999876544333222221  1 24677899999999999988764    


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       ++|+|||+||..
T Consensus        75 -~~d~vih~A~~~   86 (349)
T TIGR02622        75 -KPEIVFHLAAQP   86 (349)
T ss_pred             -CCCEEEECCccc
Confidence             689999999853

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.32  E-value=2.2e-11  Score=98.27  Aligned_cols=89  Identities=19%  Similarity=0.244  Sum_probs=67.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ++.+|+++||||+|+||.+++++|+++|++|+++++...........+....  ...++.++.+|++|++++++++++. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            5778999999999999999999999999999999875432222222222211  1125778899999999998887653 


Q ss_pred             HhcCCccEEEEcccCC
Q 030706          155 KNLKYVDIWVFMSDLH  170 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~  170 (173)
                          .+|+|||+||..
T Consensus        81 ----~~d~vih~a~~~   92 (352)
T PLN02240         81 ----RFDAVIHFAGLK   92 (352)
T ss_pred             ----CCCEEEEccccC
Confidence                799999999864

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.32  E-value=1e-11  Score=92.59  Aligned_cols=66  Identities=24%  Similarity=0.342  Sum_probs=57.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++|||+++|||+++++.|+++ ++|++++|+..                   .+++|++|++++++++++    ++++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~id   57 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKVD   57 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCCC
Confidence            6999999999999999999999 99999998642                   257899999999988765    47899


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +||||||+..
T Consensus        58 ~lv~~ag~~~   67 (199)
T PRK07578         58 AVVSAAGKVH   67 (199)
T ss_pred             EEEECCCCCC
Confidence            9999999754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.31  E-value=1.3e-11  Score=99.50  Aligned_cols=86  Identities=16%  Similarity=0.105  Sum_probs=65.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHHHHHHHh---CCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV-DSAVQSLREEF---GEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      |++|||||+|+||.+++++|++.|++|++++|+.+.. ......+....   ...++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            5899999999999999999999999999999875421 11111111100   0125788999999999998888764   


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                        ++|+|||+|+...
T Consensus        78 --~~d~ViH~Aa~~~   90 (343)
T TIGR01472        78 --KPTEIYNLAAQSH   90 (343)
T ss_pred             --CCCEEEECCcccc
Confidence              5899999999753

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.30  E-value=1.4e-11  Score=99.13  Aligned_cols=90  Identities=17%  Similarity=0.056  Sum_probs=68.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHHHHHH--HhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV-DSAVQSLRE--EFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .+++|++|||||+|+||.+++++|+++|++|++++|..... ....+.+..  .....++.++.+|++|.++++++++.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            35678999999999999999999999999999998865321 111222211  001125788999999999999988765


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                           .+|+|||+||...
T Consensus        83 -----~~d~Vih~A~~~~   95 (340)
T PLN02653         83 -----KPDEVYNLAAQSH   95 (340)
T ss_pred             -----CCCEEEECCcccc
Confidence                 5999999999753

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.30  E-value=2.8e-11  Score=96.74  Aligned_cols=86  Identities=16%  Similarity=0.043  Sum_probs=66.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..||+++||||+|+||.+++++|+++|++|+++.|+....+.............++.++.+|++|.++++++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            45789999999999999999999999999999988765443322221111112357889999999998887775      


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       .+|+|||+||..
T Consensus        77 -~~d~vih~A~~~   88 (322)
T PLN02986         77 -GCDAVFHTASPV   88 (322)
T ss_pred             -CCCEEEEeCCCc
Confidence             489999999864

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.29  E-value=8.3e-11  Score=86.78  Aligned_cols=85  Identities=12%  Similarity=0.106  Sum_probs=70.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+ |+|.++++.|++.|++|++++|+.+..+.....+..  . .++.++.+|++|+++++++++++.+.+|++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~-~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--P-ESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--C-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            68999998 677789999999999999999987766555443422  2 2588889999999999999999999999999


Q ss_pred             EEEEcccCC
Q 030706          162 IWVFMSDLH  170 (173)
Q Consensus       162 ~lVn~AG~~  170 (173)
                      ++|+.+-+.
T Consensus        78 ~lv~~vh~~   86 (177)
T PRK08309         78 LAVAWIHSS   86 (177)
T ss_pred             EEEEecccc
Confidence            999876443

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.29  E-value=2.1e-11  Score=102.15  Aligned_cols=90  Identities=29%  Similarity=0.335  Sum_probs=80.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .++.||+++||||+|.||.++++++++.+ .++++.++++.+......++...++..++.++-+||.|.+.++.++++. 
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence            45799999999999999999999999998 6899999999998888888888777668999999999999999998765 


Q ss_pred             HhcCCccEEEEcccCC
Q 030706          155 KNLKYVDIWVFMSDLH  170 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~  170 (173)
                          ++|+|+|+|+.=
T Consensus       325 ----kvd~VfHAAA~K  336 (588)
T COG1086         325 ----KVDIVFHAAALK  336 (588)
T ss_pred             ----CCceEEEhhhhc
Confidence                799999999863

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.29  E-value=7.4e-11  Score=97.10  Aligned_cols=90  Identities=19%  Similarity=0.210  Sum_probs=68.4

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH--HHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS--AVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      ..+..+++++||||+|+||+++++.|+++|++|++++|+....+.  ...++.....  ++.++.+|++|.++++++++.
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~v~~v~~Dl~d~~~l~~~~~~  132 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELP--GAEVVFGDVTDADSLRKVLFS  132 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcC--CceEEEeeCCCHHHHHHHHHH
Confidence            344677899999999999999999999999999999998654321  1111111112  478889999999999988865


Q ss_pred             HHHhcCCccEEEEcccC
Q 030706          153 AQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~  169 (173)
                      .   .+++|+||||+|.
T Consensus       133 ~---~~~~D~Vi~~aa~  146 (390)
T PLN02657        133 E---GDPVDVVVSCLAS  146 (390)
T ss_pred             h---CCCCcEEEECCcc
Confidence            3   1279999999874

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.27  E-value=6.2e-11  Score=99.01  Aligned_cols=88  Identities=17%  Similarity=0.150  Sum_probs=65.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh---h----H---------HHHHHHHHHHhCCceEEEEEeeC
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE---R----V---------DSAVQSLREEFGEQHVWGTKCDV  140 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~---~----~---------~~~~~~l~~~~~~~~~~~~~~Dv  140 (173)
                      .+++|++|||||+|+||.+++++|+++|++|+++++...   .    .         .+....+..... .++.++.+|+
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~v~~v~~Dl  122 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSG-KEIELYVGDI  122 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhC-CcceEEECCC
Confidence            367789999999999999999999999999999874211   0    0         011111111111 2588899999


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          141 SEGNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       141 ~~~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      +|.+.+++++++.     ++|+|||+|+..
T Consensus       123 ~d~~~v~~~l~~~-----~~D~ViHlAa~~  147 (442)
T PLN02572        123 CDFEFLSEAFKSF-----EPDAVVHFGEQR  147 (442)
T ss_pred             CCHHHHHHHHHhC-----CCCEEEECCCcc
Confidence            9999999888764     699999999753

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.26  E-value=4.8e-11  Score=95.08  Aligned_cols=84  Identities=17%  Similarity=0.092  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHH-hCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ++|+++||||+|+||.+++++|+++|++|++++|+....... ..+... ....++.++.+|++|.+.++++++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence            468999999999999999999999999999999876543222 122111 111257889999999988877764      


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       .+|+|||+||..
T Consensus        76 -~~d~Vih~A~~~   87 (322)
T PLN02662         76 -GCEGVFHTASPF   87 (322)
T ss_pred             -CCCEEEEeCCcc
Confidence             589999999864

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.24  E-value=9.3e-11  Score=94.99  Aligned_cols=84  Identities=19%  Similarity=0.144  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..++++|||||+|+||.+++++|+++|++|++++|+.+..+.....+..   ..++.++.+|++|.+.+.++++      
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~------   78 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK------   78 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc------
Confidence            4567899999999999999999999999999999876554443333321   2358889999999988877763      


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                       .+|+|||+||...
T Consensus        79 -~~d~Vih~A~~~~   91 (353)
T PLN02896         79 -GCDGVFHVAASME   91 (353)
T ss_pred             -CCCEEEECCcccc
Confidence             4899999999753

>PLN02650 dihydroflavonol-4-reductase

Probab=99.20  E-value=1.6e-10  Score=93.53  Aligned_cols=85  Identities=18%  Similarity=0.089  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ..|++|||||+|+||.+++++|+++|++|++++|+.+..+.....+.......++.++.+|++|.+.++++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4578999999999999999999999999999998765544332221111111257888999999988887764       


Q ss_pred             CccEEEEcccCC
Q 030706          159 YVDIWVFMSDLH  170 (173)
Q Consensus       159 ~id~lVn~AG~~  170 (173)
                      .+|+|||+|+..
T Consensus        77 ~~d~ViH~A~~~   88 (351)
T PLN02650         77 GCTGVFHVATPM   88 (351)
T ss_pred             CCCEEEEeCCCC
Confidence            489999999864

>PLN02214 cinnamoyl-CoA reductase

Probab=99.20  E-value=2.2e-10  Score=92.59  Aligned_cols=84  Identities=17%  Similarity=0.146  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-VQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.+..... ...+..  ...++.++.+|++|.+++.++++     
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-----
Confidence            4578999999999999999999999999999999976542221 122221  11257888999999998887764     


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                        ++|+|||+||..
T Consensus        81 --~~d~Vih~A~~~   92 (342)
T PLN02214         81 --GCDGVFHTASPV   92 (342)
T ss_pred             --cCCEEEEecCCC
Confidence              589999999864

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.20  E-value=1.7e-10  Score=92.82  Aligned_cols=85  Identities=16%  Similarity=0.093  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+++++||||+|+||.+++++|+++|++|+++.|+.+...... .+.......++.++.+|++|.+++.++++      
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRALQELGDLKIFGADLTDEESFEAPIA------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence            44789999999999999999999999999998888764432221 11111111247888999999988877664      


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       ++|+|||+||..
T Consensus        80 -~~d~vih~A~~~   91 (338)
T PLN00198         80 -GCDLVFHVATPV   91 (338)
T ss_pred             -cCCEEEEeCCCC
Confidence             589999999853

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.19  E-value=1.3e-10  Score=92.28  Aligned_cols=84  Identities=18%  Similarity=0.121  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH--HHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA--VQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++.++||||+|.||..+++.|+++||+|..+.|+++..+..  ..++.  ....+...+..|+.|+++++++++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~--~a~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLE--GAKERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcc--cCcccceEEeccccccchHHHHHh-----
Confidence            578999999999999999999999999999999998774332  33332  223368899999999999998886     


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                        +.|+|+|.|....
T Consensus        78 --gcdgVfH~Asp~~   90 (327)
T KOG1502|consen   78 --GCDGVFHTASPVD   90 (327)
T ss_pred             --CCCEEEEeCccCC
Confidence              5899999986543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.18  E-value=4.8e-11  Score=93.79  Aligned_cols=82  Identities=24%  Similarity=0.381  Sum_probs=61.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceE----EEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHV----WGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~----~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +|||||+|.||.+++++|++.+ .+|+++++++..+-+...++....+..++    ..+.+|++|.+.+++++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            6999999999999999999998 68999999999988888888655443223    34578999999999988765    


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                       ++|+|+|.|++
T Consensus        77 -~pdiVfHaAA~   87 (293)
T PF02719_consen   77 -KPDIVFHAAAL   87 (293)
T ss_dssp             -T-SEEEE----
T ss_pred             -CCCEEEEChhc
Confidence             89999999986

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.17  E-value=2.7e-10  Score=91.43  Aligned_cols=84  Identities=19%  Similarity=0.287  Sum_probs=63.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+|+||.++++.|+++|++|+++++...........+....+ .++.++.+|++|.+++.++++.     .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG-KHPTFVEGDIRNEALLTEILHD-----HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcC-CCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence            589999999999999999999999999987653332222222222222 2467788999999998887754     3699


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +|||+||...
T Consensus        76 ~vvh~a~~~~   85 (338)
T PRK10675         76 TVIHFAGLKA   85 (338)
T ss_pred             EEEECCcccc
Confidence            9999998753

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.13  E-value=5.9e-10  Score=90.26  Aligned_cols=88  Identities=20%  Similarity=0.183  Sum_probs=65.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC---CceEEEEEeeCCCHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG---EQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      ..+.+|+++||||+|.||..++++|+++|++|++++|...........+....+   ..++.++.+|+.|.+.+.++++ 
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence            346778999999999999999999999999999999865332222222211111   1257889999999888777664 


Q ss_pred             HHHhcCCccEEEEcccCC
Q 030706          153 AQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~  170 (173)
                            .+|+|||.|+..
T Consensus        90 ------~~d~ViHlAa~~  101 (348)
T PRK15181         90 ------NVDYVLHQAALG  101 (348)
T ss_pred             ------CCCEEEECcccc
Confidence                  489999999864

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.12  E-value=1.9e-10  Score=88.05  Aligned_cols=76  Identities=20%  Similarity=0.239  Sum_probs=60.3

Q ss_pred             EEEEEcC-CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           82 NVLITGS-TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        82 ~~lItGa-~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      +=.||.. +||||+++|+.|+++|++|+++++...        +..      .....+|+++.++++++++++.+.+|++
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~------~~~~~~Dv~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP------EPHPNLSIREIETTKDLLITLKELVQEH   81 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc------ccCCcceeecHHHHHHHHHHHHHHcCCC
Confidence            4456664 789999999999999999999876311        100      0013589999999999999999999999


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+||||||+..
T Consensus        82 DiLVnnAgv~d   92 (227)
T TIGR02114        82 DILIHSMAVSD   92 (227)
T ss_pred             CEEEECCEecc
Confidence            99999999753

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.11  E-value=9.2e-10  Score=89.89  Aligned_cols=86  Identities=15%  Similarity=0.183  Sum_probs=64.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh----CCceEEEEEeeCCCHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF----GEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      ..++|++|||||+|+||.++++.|+++|++|+++.|+.+..+.. .++....    ....+.++.+|++|.+++.++++.
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            36689999999999999999999999999999888876544333 2222111    012477889999999998887753


Q ss_pred             HHHhcCCccEEEEcccCC
Q 030706          153 AQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~  170 (173)
                             +|.+||.|++.
T Consensus       129 -------~d~V~hlA~~~  139 (367)
T PLN02686        129 -------CAGVFHTSAFV  139 (367)
T ss_pred             -------ccEEEecCeee
Confidence                   57777777653

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.11  E-value=3.8e-10  Score=91.25  Aligned_cols=84  Identities=18%  Similarity=0.211  Sum_probs=60.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEE-EEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      |++|||||+|+||.++++.|.++|+.++ ++++.... .. ...+.......++.++.+|++|.+++++++++.     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GN-LMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cc-hhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            5799999999999999999999998744 55554321 11 111111111124778899999999998888752     6


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+|||+||...
T Consensus        75 ~D~Vih~A~~~~   86 (355)
T PRK10217         75 PDCVMHLAAESH   86 (355)
T ss_pred             CCEEEECCcccC
Confidence            999999999753

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.07  E-value=9.2e-10  Score=86.85  Aligned_cols=86  Identities=21%  Similarity=0.298  Sum_probs=69.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++++|||||+|.||.+++.+|.+.|+.|+++|.-..........++...+ ..++.+++.|+.|.+.++++|++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            57899999999999999999999999999998644333333444433322 237999999999999999999886     


Q ss_pred             CccEEEEcccCC
Q 030706          159 YVDIWVFMSDLH  170 (173)
Q Consensus       159 ~id~lVn~AG~~  170 (173)
                      .+|.|+|-|+..
T Consensus        77 ~fd~V~Hfa~~~   88 (343)
T KOG1371|consen   77 KFDAVMHFAALA   88 (343)
T ss_pred             CCceEEeehhhh
Confidence            699999998864

>PLN02427 UDP-apiose/xylose synthase

Probab=99.07  E-value=9.3e-10  Score=90.19  Aligned_cols=86  Identities=9%  Similarity=0.253  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.++++||||+|.||..+++.|+++ |++|++++|+.+.............. .++.++.+|++|.+.++++++     
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~-~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWS-GRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCC-CCeEEEEcCCCChHHHHHHhh-----
Confidence            44568999999999999999999998 58999999875443222111000011 258889999999988877664     


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                        .+|+|||+|+...
T Consensus        86 --~~d~ViHlAa~~~   98 (386)
T PLN02427         86 --MADLTINLAAICT   98 (386)
T ss_pred             --cCCEEEEcccccC
Confidence              4799999998643

>PLN02583 cinnamoyl-CoA reductase

Probab=99.04  E-value=3.1e-09  Score=84.22  Aligned_cols=82  Identities=15%  Similarity=0.157  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ++|+++||||+|+||.+++++|+++|++|+++.|+...  ..+....+... + .++.++.+|++|.+++.+++.     
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE-E-ERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC-C-CceEEEEecCCCHHHHHHHHc-----
Confidence            46899999999999999999999999999999986422  22222222111 1 257888999999988866553     


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                        ..|+++|.++.
T Consensus        78 --~~d~v~~~~~~   88 (297)
T PLN02583         78 --GCSGLFCCFDP   88 (297)
T ss_pred             --CCCEEEEeCcc
Confidence              57888886653

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.04  E-value=1.4e-09  Score=86.04  Aligned_cols=82  Identities=18%  Similarity=0.183  Sum_probs=60.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      +++||||+|+||.+++++|++.|  ++|+++++.... ..+....+.   ...++.++.+|++|++++.++++..     
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~-----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTEH-----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence            38999999999999999999987  789888764211 111111221   1125778899999999998887653     


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+|||+||...
T Consensus        73 ~~d~vi~~a~~~~   85 (317)
T TIGR01181        73 QPDAVVHFAAESH   85 (317)
T ss_pred             CCCEEEEcccccC
Confidence            6999999998753

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.04  E-value=1.5e-09  Score=86.15  Aligned_cols=81  Identities=17%  Similarity=0.249  Sum_probs=61.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+|+||..+++.|+++|++|+++++...........+... +  ++.++.+|+++.++++++++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-T--RVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-c--ceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            3799999999999999999999999998876433222222222111 1  467788999999999888764     4799


Q ss_pred             EEEEcccCC
Q 030706          162 IWVFMSDLH  170 (173)
Q Consensus       162 ~lVn~AG~~  170 (173)
                      ++|||||..
T Consensus        73 ~vv~~ag~~   81 (328)
T TIGR01179        73 AVIHFAGLI   81 (328)
T ss_pred             EEEECcccc
Confidence            999999975

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=99.02  E-value=1.6e-09  Score=89.15  Aligned_cols=79  Identities=27%  Similarity=0.377  Sum_probs=61.8

Q ss_pred             CCCCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC
Q 030706           77 MLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV  140 (173)
Q Consensus        77 ~~~~k~~lItGa----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv  140 (173)
                      .+.||++|||||                +|++|+++|+.|+++|++|++++++.+ .+         ... .  ...+|+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~~-~--~~~~dv  251 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TPA-G--VKRIDV  251 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CCC-C--cEEEcc
Confidence            478999999999                566999999999999999999988652 11         011 1  236799


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          141 SEGNEVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       141 ~~~~~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++.+++.+.++   +.++.+|++|||||+..
T Consensus       252 ~~~~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        252 ESAQEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             CCHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence            98888776665   55789999999999853

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.02  E-value=2.5e-09  Score=86.38  Aligned_cols=82  Identities=16%  Similarity=0.229  Sum_probs=58.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      ++|||||+|+||.+++++|+++|+. |+.+++......  ...+.......++.++.+|++|.+++++++++.     ++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN--LESLADVSDSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch--HHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            5899999999999999999999975 555554321100  111111111225778899999999999888752     79


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+|||+||..
T Consensus        75 d~vih~A~~~   84 (352)
T PRK10084         75 DAVMHLAAES   84 (352)
T ss_pred             CEEEECCccc
Confidence            9999999975

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.99  E-value=4.5e-09  Score=81.28  Aligned_cols=81  Identities=17%  Similarity=0.303  Sum_probs=59.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~  156 (173)
                      ..+++++||||+|+||+.+++.|++.|++|+++.|+.+.......    . . .++.++.+|++|. +.+   .+.+.  
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~-~-~~~~~~~~Dl~d~~~~l---~~~~~--   83 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q-D-PSLQIVRADVTEGSDKL---VEAIG--   83 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c-C-CceEEEEeeCCCCHHHH---HHHhh--
Confidence            446799999999999999999999999999999998765432211    1 1 2578889999983 322   22220  


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                       .++|+||+|+|..
T Consensus        84 -~~~d~vi~~~g~~   96 (251)
T PLN00141         84 -DDSDAVICATGFR   96 (251)
T ss_pred             -cCCCEEEECCCCC
Confidence             2699999999874

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.99  E-value=2.5e-09  Score=83.75  Aligned_cols=77  Identities=19%  Similarity=0.230  Sum_probs=63.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      ++|||||+|-||.+++.+|++.|++|+++|.-...-.+.+...       .+.+++.|+.|.+.++++|++.     +||
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~id   69 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KID   69 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CCC
Confidence            6899999999999999999999999999997544333333221       1568899999999999998875     899


Q ss_pred             EEEEcccCC
Q 030706          162 IWVFMSDLH  170 (173)
Q Consensus       162 ~lVn~AG~~  170 (173)
                      .|||.||..
T Consensus        70 aViHFAa~~   78 (329)
T COG1087          70 AVVHFAASI   78 (329)
T ss_pred             EEEECcccc
Confidence            999999864

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.98  E-value=6.2e-09  Score=76.45  Aligned_cols=72  Identities=24%  Similarity=0.291  Sum_probs=62.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI  162 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  162 (173)
                      ++|+||+|.+|+.++++|+++|++|+++.|++++.++          ..++.++.+|+.|++++.+.++       +.|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            6899999999999999999999999999999887654          1368999999999988877664       6899


Q ss_pred             EEEcccCCC
Q 030706          163 WVFMSDLHS  171 (173)
Q Consensus       163 lVn~AG~~~  171 (173)
                      +|+++|...
T Consensus        64 vi~~~~~~~   72 (183)
T PF13460_consen   64 VIHAAGPPP   72 (183)
T ss_dssp             EEECCHSTT
T ss_pred             hhhhhhhhc
Confidence            999997543

...

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.97  E-value=8.8e-09  Score=78.16  Aligned_cols=76  Identities=30%  Similarity=0.435  Sum_probs=63.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI  162 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  162 (173)
                      +|||||+|.||.+++++|.++|+.|+.+.+............       ++.++.+|+.|.+.++++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-------~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-------NVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-------TEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-------eEEEEEeecccccccccccccc-----CceE
Confidence            699999999999999999999999888887765432222111       4888999999999999999876     7999


Q ss_pred             EEEcccCC
Q 030706          163 WVFMSDLH  170 (173)
Q Consensus       163 lVn~AG~~  170 (173)
                      |||+||..
T Consensus        69 vi~~a~~~   76 (236)
T PF01370_consen   69 VIHLAAFS   76 (236)
T ss_dssp             EEEEBSSS
T ss_pred             EEEeeccc
Confidence            99999875

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.92  E-value=8.5e-09  Score=81.70  Aligned_cols=82  Identities=16%  Similarity=0.244  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecCh---hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSA---ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.++..+++...++  .+.+..+|+++.++++..++  
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~--~~~~~~~d~~~~~~~~~~~~--  198 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP--ECIVNVYDLNDTEKLKAEIA--  198 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC--CceeEEechhhhhHHHhhhc--
Confidence            57899999999 69999999999999985 99999986   566666666644333  34555678887776655443  


Q ss_pred             HHhcCCccEEEEcccC
Q 030706          154 QKNLKYVDIWVFMSDL  169 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~  169 (173)
                           ..|+||||.-+
T Consensus       199 -----~~DilINaTp~  209 (289)
T PRK12548        199 -----SSDILVNATLV  209 (289)
T ss_pred             -----cCCEEEEeCCC
Confidence                 46999998643

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.91  E-value=8e-09  Score=82.59  Aligned_cols=73  Identities=19%  Similarity=0.156  Sum_probs=58.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+|.||.+++++|.++|++|.+++|+.+....    +..    ..+.++.+|++|++++.++++       ++|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~----~~v~~v~~Dl~d~~~l~~al~-------g~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE----WGAELVYGDLSLPETLPPSFK-------GVT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh----cCCEEEECCCCCHHHHHHHHC-------CCC
Confidence            69999999999999999999999999999998654321    111    147788999999988877664       589


Q ss_pred             EEEEcccC
Q 030706          162 IWVFMSDL  169 (173)
Q Consensus       162 ~lVn~AG~  169 (173)
                      +|||+++.
T Consensus        67 ~Vi~~~~~   74 (317)
T CHL00194         67 AIIDASTS   74 (317)
T ss_pred             EEEECCCC
Confidence            99998764

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.91  E-value=3.7e-09  Score=84.10  Aligned_cols=75  Identities=21%  Similarity=0.236  Sum_probs=60.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      ++++||||+|+||..+++.|+++|++|++++|+.+....    +.    ...+.++.+|++|.+++.++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~----~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE----GLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc----cCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            368999999999999999999999999999997654321    11    1147788999999998877664       57


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+|||+|+..
T Consensus        66 d~vi~~a~~~   75 (328)
T TIGR03466        66 RALFHVAADY   75 (328)
T ss_pred             CEEEEeceec
Confidence            9999999753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.83  E-value=2.6e-08  Score=87.18  Aligned_cols=87  Identities=16%  Similarity=0.211  Sum_probs=62.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .++|++|||||+|.||.++++.|+++  |++|+++++.... ... ..+.......++.++.+|++|.+.+.+++..   
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~-~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNL-KNLNPSKSSPNFKFVKGDIASADLVNYLLIT---   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chh-hhhhhcccCCCeEEEECCCCChHHHHHHHhh---
Confidence            45689999999999999999999998  5789988874311 111 1111111122588899999999887765532   


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                        .++|+|||+|+...
T Consensus        79 --~~~D~ViHlAa~~~   92 (668)
T PLN02260         79 --EGIDTIMHFAAQTH   92 (668)
T ss_pred             --cCCCEEEECCCccC
Confidence              37999999999754

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.83  E-value=1.1e-08  Score=81.17  Aligned_cols=65  Identities=25%  Similarity=0.302  Sum_probs=54.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      ++|||||+|.||.++++.|.++| +|+.++|...                   .+..|++|.+.+++++++.     ++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999 7888887421                   2356999999998887753     689


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +|||+|+...
T Consensus        57 ~Vih~Aa~~~   66 (299)
T PRK09987         57 VIVNAAAHTA   66 (299)
T ss_pred             EEEECCccCC
Confidence            9999999764

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.82  E-value=2.3e-08  Score=81.78  Aligned_cols=82  Identities=13%  Similarity=0.001  Sum_probs=60.8

Q ss_pred             CCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        74 ~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ..++-.+|+++||||+|.||.++++.|.++|++|++++|.....      +... . ..+.++.+|++|.+.+..+++  
T Consensus        15 ~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~-~-~~~~~~~~Dl~d~~~~~~~~~--   84 (370)
T PLN02695         15 PYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED-M-FCHEFHLVDLRVMENCLKVTK--   84 (370)
T ss_pred             CCCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc-c-ccceEEECCCCCHHHHHHHHh--
Confidence            33445678999999999999999999999999999999864321      0000 0 024567889999887666542  


Q ss_pred             HHhcCCccEEEEcccCC
Q 030706          154 QKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~  170 (173)
                           .+|+|||+|+..
T Consensus        85 -----~~D~Vih~Aa~~   96 (370)
T PLN02695         85 -----GVDHVFNLAADM   96 (370)
T ss_pred             -----CCCEEEEccccc
Confidence                 589999999754

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.81  E-value=3.8e-08  Score=79.50  Aligned_cols=77  Identities=19%  Similarity=0.192  Sum_probs=57.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC-CHHHHHHHHHHHHHhcC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS-EGNEVADLVAFAQKNLK  158 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g  158 (173)
                      ++++||||+|.||..++++|++. |++|++++|+.....    .+.   ....+.++.+|+. +.+.+.++++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~---~~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLV---NHPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hhc---cCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            46999999999999999999986 699999998654322    111   1125888899998 6665544432       


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+|||+|+...
T Consensus        68 ~~d~ViH~aa~~~   80 (347)
T PRK11908         68 KCDVILPLVAIAT   80 (347)
T ss_pred             CCCEEEECcccCC
Confidence            5899999998643

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.79  E-value=1.4e-07  Score=70.42  Aligned_cols=83  Identities=23%  Similarity=0.278  Sum_probs=64.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++++++|+||+|++|+.+++.|++.|++|++++|+.++.++..+.+....+   .....+|+.+.+++.+.++     
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~-----   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG---EGVGAVETSDDAARAAAIK-----   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC---CcEEEeeCCCHHHHHHHHh-----
Confidence            36789999999999999999999999999999999998887777766654332   2344568888887766653     


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                        ..|+||++...
T Consensus        97 --~~diVi~at~~  107 (194)
T cd01078          97 --GADVVFAAGAA  107 (194)
T ss_pred             --cCCEEEECCCC
Confidence              57888886543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.79  E-value=2.2e-08  Score=79.04  Aligned_cols=76  Identities=18%  Similarity=0.271  Sum_probs=58.2

Q ss_pred             EEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           84 LITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        84 lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      |||||+|.||.+++++|+++|  ++|.++++......  ...+... +  ...++.+|++|.++++++++       +.|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~-~--~~~~~~~Di~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS-G--VKEYIQGDITDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc-c--ceeEEEeccccHHHHHHHhc-------CCc
Confidence            699999999999999999999  78988887654321  1111111 1  23388999999999988875       579


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +|||.|+...
T Consensus        69 ~V~H~Aa~~~   78 (280)
T PF01073_consen   69 VVFHTAAPVP   78 (280)
T ss_pred             eEEEeCcccc
Confidence            9999998754

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.76  E-value=4.9e-08  Score=85.47  Aligned_cols=80  Identities=19%  Similarity=0.208  Sum_probs=60.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHH-HHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNE-VADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~  155 (173)
                      ..+++++||||+|.||.+++++|+++ |++|++++|.......    +.   ...++.++.+|++|.+. +++++     
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~---~~~~~~~~~gDl~d~~~~l~~~l-----  380 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FL---GHPRFHFVEGDISIHSEWIEYHI-----  380 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hc---CCCceEEEeccccCcHHHHHHHh-----
Confidence            45788999999999999999999986 7999999987643211    11   11257888999998654 33333     


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                        ..+|+|||+||...
T Consensus       381 --~~~D~ViHlAa~~~  394 (660)
T PRK08125        381 --KKCDVVLPLVAIAT  394 (660)
T ss_pred             --cCCCEEEECccccC
Confidence              25899999998754

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.76  E-value=5.4e-08  Score=79.98  Aligned_cols=79  Identities=25%  Similarity=0.294  Sum_probs=60.5

Q ss_pred             CCCCCEEEEEcC---------------Cch-HHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC
Q 030706           77 MLPPYNVLITGS---------------TKG-IGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV  140 (173)
Q Consensus        77 ~~~~k~~lItGa---------------~~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv  140 (173)
                      .+.||+++||||               ++| +|.++++.|..+|++|+++++.....          .+. .+  ..+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~~-~~--~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TPP-GV--KSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CCC-Cc--EEEEe
Confidence            378999999999               556 99999999999999999988654321          111 12  45799


Q ss_pred             CCHHHH-HHHHHHHHHhcCCccEEEEcccCCC
Q 030706          141 SEGNEV-ADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       141 ~~~~~v-~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++.+++ ++++++   .++.+|++|+|||+..
T Consensus       249 ~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd  277 (390)
T TIGR00521       249 STAEEMLEAALNE---LAKDFDIFISAAAVAD  277 (390)
T ss_pred             ccHHHHHHHHHHh---hcccCCEEEEcccccc
Confidence            998888 556544   3478999999999863

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.76  E-value=3.6e-08  Score=78.22  Aligned_cols=76  Identities=13%  Similarity=0.131  Sum_probs=52.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH--hcCCc
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK--NLKYV  160 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~i  160 (173)
                      ++||||+|.||.+++++|++.|++++++.++....... .           .+..+|+.|..+.+.+++.+.+  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V-----------NLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H-----------hhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999998766655543321110 0           1124577776666666655542  34679


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+|||+||..
T Consensus        70 d~Vih~A~~~   79 (308)
T PRK11150         70 EAIFHEGACS   79 (308)
T ss_pred             cEEEECceec
Confidence            9999999854

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.75  E-value=1.7e-09  Score=81.43  Aligned_cols=92  Identities=17%  Similarity=0.226  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+|++|+||+++|||..++..+..++-......++....+  .+.+.-.++ ........|+++..-++++++..++++
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~   80 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKG   80 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcC
Confidence            35789999999999999988888877744333332221111  122222223 234556678999999999999999999


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      |..|++|||||..++
T Consensus        81 gkr~iiI~NAG~lgd   95 (253)
T KOG1204|consen   81 GKRDIIIHNAGSLGD   95 (253)
T ss_pred             CceeEEEecCCCccc
Confidence            999999999998875

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.74  E-value=9.3e-08  Score=76.91  Aligned_cols=86  Identities=26%  Similarity=0.226  Sum_probs=57.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhH---HHHHHHHHHHh------CCceEEEEEeeCCCHHH-H-HH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERV---DSAVQSLREEF------GEQHVWGTKCDVSEGNE-V-AD  148 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~---~~~~~~l~~~~------~~~~~~~~~~Dv~~~~~-v-~~  148 (173)
                      +++||||+|+||.++++.|+++|  ++|+++.|+.+..   +...+.+....      ...++.++.+|++++.. + ..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            47999999999999999999998  7899999976422   12222222111      00268889999986531 0 11


Q ss_pred             HHHHHHHhcCCccEEEEcccCC
Q 030706          149 LVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       149 ~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      .+.++   ...+|+||||||..
T Consensus        81 ~~~~~---~~~~d~vih~a~~~   99 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALV   99 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEe
Confidence            11222   14699999999864

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.74  E-value=4.4e-08  Score=76.71  Aligned_cols=82  Identities=17%  Similarity=0.184  Sum_probs=62.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.+|||||+|+||.++++.+..+.  .+|+.+|.-.  ...+.    +.......++.|++.||+|.+.+.+++++.   
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~----l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~---   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLEN----LADVEDSPRYRFVQGDICDRELVDRLFKEY---   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHH----HHhhhcCCCceEEeccccCHHHHHHHHHhc---
Confidence            468999999999999999999876  4577777522  11222    222223357999999999999999988764   


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                        .+|++||-|+-++
T Consensus        74 --~~D~VvhfAAESH   86 (340)
T COG1088          74 --QPDAVVHFAAESH   86 (340)
T ss_pred             --CCCeEEEechhcc
Confidence              7999999987553

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.73  E-value=4e-08  Score=77.00  Aligned_cols=60  Identities=22%  Similarity=0.319  Sum_probs=52.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI  162 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  162 (173)
                      ++||||+|+||.+++++|.+.|++|++++|.                       .+|+.+.++++++++..     .+|+
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d~   53 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPDA   53 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCCE
Confidence            7999999999999999999999999998874                       36999999988887653     6899


Q ss_pred             EEEcccCC
Q 030706          163 WVFMSDLH  170 (173)
Q Consensus       163 lVn~AG~~  170 (173)
                      |||+||..
T Consensus        54 vi~~a~~~   61 (287)
T TIGR01214        54 VVNTAAYT   61 (287)
T ss_pred             EEECCccc
Confidence            99999864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK05865 hypothetical protein; Provisional

Probab=98.68  E-value=1.4e-07  Score=84.13  Aligned_cols=71  Identities=15%  Similarity=0.213  Sum_probs=58.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+|+||.++++.|+++|++|++++|+....      +    . .++.++.+|++|.+++.++++       .+|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~----~-~~v~~v~gDL~D~~~l~~al~-------~vD   63 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W----P-SSADFIAADIRDATAVESAMT-------GAD   63 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c----c-cCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            589999999999999999999999999999874321      1    1 147788999999998887764       489


Q ss_pred             EEEEcccCC
Q 030706          162 IWVFMSDLH  170 (173)
Q Consensus       162 ~lVn~AG~~  170 (173)
                      +|||+|+..
T Consensus        64 ~VVHlAa~~   72 (854)
T PRK05865         64 VVAHCAWVR   72 (854)
T ss_pred             EEEECCCcc
Confidence            999999864

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.66  E-value=7e-08  Score=76.23  Aligned_cols=75  Identities=24%  Similarity=0.268  Sum_probs=58.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .+||||++|.||.+++++|.++|++|+.++|.........         ..+.++.+|+++.+.+.++++..     . |
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-d   66 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-D   66 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-C
Confidence            3899999999999999999999999999999765432221         14678889999885555544321     1 9


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      .+||+|+...
T Consensus        67 ~vih~aa~~~   76 (314)
T COG0451          67 AVIHLAAQSS   76 (314)
T ss_pred             EEEEccccCc
Confidence            9999999865

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.64  E-value=8.8e-08  Score=75.77  Aligned_cols=62  Identities=31%  Similarity=0.402  Sum_probs=48.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      ++||||++|.||.++.+.|.+.|+.|+.++|.                       .+|++|.+.+.+++++.     ++|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~pd   53 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KPD   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------S
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CCC
Confidence            68999999999999999999999999988775                       57999999999998876     699


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +|||+||+..
T Consensus        54 ~Vin~aa~~~   63 (286)
T PF04321_consen   54 VVINCAAYTN   63 (286)
T ss_dssp             EEEE------
T ss_pred             eEeccceeec
Confidence            9999999863

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.61  E-value=2.8e-07  Score=77.20  Aligned_cols=79  Identities=20%  Similarity=0.205  Sum_probs=56.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .+++++|||||+|.||..++++|+++|++|+++++......+.   +.......++.++..|+.+..     +       
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~~~~~~i~~D~~~~~-----l-------  181 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSNPNFELIRHDVVEPI-----L-------  181 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccCCceEEEECCccChh-----h-------
Confidence            3668999999999999999999999999999998753221111   111112235777788886652     1       


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      ..+|+|||+|+...
T Consensus       182 ~~~D~ViHlAa~~~  195 (442)
T PLN02206        182 LEVDQIYHLACPAS  195 (442)
T ss_pred             cCCCEEEEeeeecc
Confidence            25899999998653

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.61  E-value=2e-07  Score=73.90  Aligned_cols=76  Identities=12%  Similarity=0.130  Sum_probs=54.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +|||||+|.||.++++.|.+.|+ .|+++++..... . ..++    .   ...+..|+.+.+.++.+.+.   .++.+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~----~---~~~~~~d~~~~~~~~~~~~~---~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNL----A---DLVIADYIDKEDFLDRLEKG---AFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhh----h---heeeeccCcchhHHHHHHhh---ccCCCC
Confidence            58999999999999999999997 788887754321 1 1111    1   12356788887776665543   346899


Q ss_pred             EEEEcccCC
Q 030706          162 IWVFMSDLH  170 (173)
Q Consensus       162 ~lVn~AG~~  170 (173)
                      +|||+||..
T Consensus        69 ~vvh~A~~~   77 (314)
T TIGR02197        69 AIFHQGACS   77 (314)
T ss_pred             EEEECcccc
Confidence            999999864

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.59  E-value=8.3e-07  Score=74.21  Aligned_cols=78  Identities=22%  Similarity=0.252  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ..++++||||+|.||..++++|+++|++|+++++......+....+   ....++.++..|+.+..     +       .
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~-----~-------~  183 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI-----L-------L  183 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc-----c-------c
Confidence            4568999999999999999999999999999998532211111111   12225777788886542     1       2


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+|||+|+...
T Consensus       184 ~~D~ViHlAa~~~  196 (436)
T PLN02166        184 EVDQIYHLACPAS  196 (436)
T ss_pred             CCCEEEECceecc
Confidence            5899999998643

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.58  E-value=4.1e-07  Score=79.32  Aligned_cols=83  Identities=20%  Similarity=0.214  Sum_probs=57.4

Q ss_pred             EEEEEcCCchHHHHHHHHHH--HcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHH--HHHHHHHHHhc
Q 030706           82 NVLITGSTKGIGYALAKEFL--KAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEV--ADLVAFAQKNL  157 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v--~~~~~~~~~~~  157 (173)
                      ++|||||+|.||.++++.|+  ..|++|++++|+... .. ...+....+..++.++.+|++|++..  ...++++    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SR-LEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HH-HHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  478999999996432 11 12222222223688899999985310  1122222    


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      .++|+|||+||..
T Consensus        76 ~~~D~Vih~Aa~~   88 (657)
T PRK07201         76 GDIDHVVHLAAIY   88 (657)
T ss_pred             cCCCEEEECceee
Confidence            4799999999864

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.57  E-value=9.6e-08  Score=75.04  Aligned_cols=75  Identities=15%  Similarity=0.153  Sum_probs=59.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC-cc
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY-VD  161 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~-id  161 (173)
                      ++||||+|.||..++++|.+.|++|.++.|+++....         .  .+..+.+|+.|++++..+++.. +.+.. +|
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~--~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d   69 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------P--NEKHVKFDWLDEDTWDNPFSSD-DGMEPEIS   69 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------C--CCccccccCCCHHHHHHHHhcc-cCcCCcee
Confidence            7999999999999999999999999999998764310         1  2455678999999998888653 33344 89


Q ss_pred             EEEEcccC
Q 030706          162 IWVFMSDL  169 (173)
Q Consensus       162 ~lVn~AG~  169 (173)
                      .++++++.
T Consensus        70 ~v~~~~~~   77 (285)
T TIGR03649        70 AVYLVAPP   77 (285)
T ss_pred             EEEEeCCC
Confidence            99888764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02996 fatty acyl-CoA reductase

Probab=98.56  E-value=5.9e-07  Score=76.17  Aligned_cols=87  Identities=20%  Similarity=0.291  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEecChhh---HHHHHHHH---------HHHhC-------CceEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAER---VDSAVQSL---------REEFG-------EQHVWG  135 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~l---------~~~~~-------~~~~~~  135 (173)
                      +.+|+++||||+|.||..+++.|++.+   .+|+++.|....   .+....++         ....+       ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            789999999999999999999999864   478888886431   11111111         11111       136899


Q ss_pred             EEeeCCC-------HHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          136 TKCDVSE-------GNEVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       136 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +..|+++       .+.++.+++       .+|+|||+|+...
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~  124 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTN  124 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccC
Confidence            9999984       333444432       5899999998753

>PLN02778 3,5-epimerase/4-reductase

Probab=98.52  E-value=8.1e-07  Score=70.63  Aligned_cols=60  Identities=17%  Similarity=0.062  Sum_probs=45.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      +++|||||+|.||..+++.|.++|++|+...                          .|+.|.+.+...++..     ++
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~~-----~~   58 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDAV-----KP   58 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHhc-----CC
Confidence            5799999999999999999999999886421                          2344555555544432     68


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+|||+||...
T Consensus        59 D~ViH~Aa~~~   69 (298)
T PLN02778         59 THVFNAAGVTG   69 (298)
T ss_pred             CEEEECCcccC
Confidence            99999999764

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.50  E-value=1.2e-06  Score=75.69  Aligned_cols=87  Identities=20%  Similarity=0.286  Sum_probs=59.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEecChhh--H-HHHHHHH---------HHHhC-------CceEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAER--V-DSAVQSL---------REEFG-------EQHVWG  135 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l---------~~~~~-------~~~~~~  135 (173)
                      +.+|+++||||+|.||..++++|++.+   .+|+++.|....  . +....++         .+..+       ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            589999999999999999999999865   378998885422  1 1221121         11112       236889


Q ss_pred             EEeeCCCHH------HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          136 TKCDVSEGN------EVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       136 ~~~Dv~~~~------~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +..|++++.      ..+.+.       ..+|+|||+|+...
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~-------~~vDiVIH~AA~v~  231 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA-------KEVDVIINSAANTT  231 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH-------hcCCEEEECccccc
Confidence            999999872      333222       15899999998753

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.49  E-value=4.1e-07  Score=71.35  Aligned_cols=60  Identities=20%  Similarity=0.340  Sum_probs=53.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI  162 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  162 (173)
                      +||||++|-+|.++++.|. .+..|+.+++..                       +|++|.+.+.+++.+.     ++|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence            8999999999999999999 668999887742                       7999999999999887     8999


Q ss_pred             EEEcccCCC
Q 030706          163 WVFMSDLHS  171 (173)
Q Consensus       163 lVn~AG~~~  171 (173)
                      |||+|++..
T Consensus        54 VIn~AAyt~   62 (281)
T COG1091          54 VINAAAYTA   62 (281)
T ss_pred             EEECccccc
Confidence            999999763

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.49  E-value=1.8e-07  Score=73.84  Aligned_cols=60  Identities=12%  Similarity=0.185  Sum_probs=49.5

Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEE
Q 030706           84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIW  163 (173)
Q Consensus        84 lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l  163 (173)
                      |||||+|.||..+++.|.+.|+.|+++.+.                      ..+|++|.++++++++..     ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            699999999999999999999887765421                      147999999888887653     68999


Q ss_pred             EEcccCC
Q 030706          164 VFMSDLH  170 (173)
Q Consensus       164 Vn~AG~~  170 (173)
                      ||+|+..
T Consensus        54 ih~A~~~   60 (306)
T PLN02725         54 ILAAAKV   60 (306)
T ss_pred             EEeeeee
Confidence            9999864

>PRK12320 hypothetical protein; Provisional

Probab=98.46  E-value=9.5e-07  Score=77.39  Aligned_cols=70  Identities=14%  Similarity=0.238  Sum_probs=54.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+|.||..+++.|.++|++|+++++.....           ....+.++.+|++|.. +.+++       .++|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-----------~~~~ve~v~~Dl~d~~-l~~al-------~~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-----------LDPRVDYVCASLRNPV-LQELA-------GEAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-----------ccCCceEEEccCCCHH-HHHHh-------cCCC
Confidence            599999999999999999999999999999864321           0124778899999873 33332       2589


Q ss_pred             EEEEcccCC
Q 030706          162 IWVFMSDLH  170 (173)
Q Consensus       162 ~lVn~AG~~  170 (173)
                      +|||+|++.
T Consensus        63 ~VIHLAa~~   71 (699)
T PRK12320         63 AVIHLAPVD   71 (699)
T ss_pred             EEEEcCccC
Confidence            999999864

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.46  E-value=1.4e-06  Score=72.94  Aligned_cols=77  Identities=27%  Similarity=0.298  Sum_probs=57.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.+|+++|+|+++ +|.++++.|++.|++|++++++. +..++...++...    .+.++..|..+            +.
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~------------~~   65 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPE------------EF   65 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcch------------hH
Confidence            6789999999877 99999999999999999999875 3344444444322    24566777765            12


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      .+.+|+||+++|+..
T Consensus        66 ~~~~d~vv~~~g~~~   80 (450)
T PRK14106         66 LEGVDLVVVSPGVPL   80 (450)
T ss_pred             hhcCCEEEECCCCCC
Confidence            357999999999854

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.43  E-value=1.5e-06  Score=71.46  Aligned_cols=75  Identities=21%  Similarity=0.366  Sum_probs=57.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC-C-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           83 VLITGSTKGIGYALAKEFLKAG-D-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G-~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |+|.|+ |.+|..+++.|++.+ . +|++.+|+.+++++..+++    ...++.++++|+.|.++++++++       ..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~   68 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC   68 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence            689999 999999999999987 4 8999999998877776654    22369999999999999888764       45


Q ss_pred             cEEEEcccC
Q 030706          161 DIWVFMSDL  169 (173)
Q Consensus       161 d~lVn~AG~  169 (173)
                      |+|||++|-
T Consensus        69 dvVin~~gp   77 (386)
T PF03435_consen   69 DVVINCAGP   77 (386)
T ss_dssp             SEEEE-SSG
T ss_pred             CEEEECCcc
Confidence            999999985

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.43  E-value=1.3e-06  Score=71.50  Aligned_cols=76  Identities=21%  Similarity=0.390  Sum_probs=62.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +++||.|+ |++|+.+|..|+++| .+|++.+|+.++..+.....    .. ++...++|+.|.+.+.+++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~----~~-~v~~~~vD~~d~~al~~li~~-------   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI----GG-KVEALQVDAADVDALVALIKD-------   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc----cc-cceeEEecccChHHHHHHHhc-------
Confidence            56889888 999999999999999 89999999987765554332    22 688999999999988888764       


Q ss_pred             ccEEEEcccC
Q 030706          160 VDIWVFMSDL  169 (173)
Q Consensus       160 id~lVn~AG~  169 (173)
                      .|+|||++..
T Consensus        69 ~d~VIn~~p~   78 (389)
T COG1748          69 FDLVINAAPP   78 (389)
T ss_pred             CCEEEEeCCc
Confidence            3999998764

>PRK09620 hypothetical protein; Provisional

Probab=98.42  E-value=6.9e-07  Score=68.53  Aligned_cols=82  Identities=17%  Similarity=0.157  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCC----------------chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC
Q 030706           78 LPPYNVLITGST----------------KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS  141 (173)
Q Consensus        78 ~~~k~~lItGa~----------------~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (173)
                      +.||.+|||+|.                |.||.++|++|+++|++|++++........   .+   .....+..+..|  
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~---~~~~~~~~V~s~--   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI---NNQLELHPFEGI--   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc---CCceeEEEEecH--
Confidence            468999999886                999999999999999999988763221100   00   001123333332  


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          142 EGNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       142 ~~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                        .++...+.++.+. ..+|++||+|++.
T Consensus        73 --~d~~~~l~~~~~~-~~~D~VIH~AAvs   98 (229)
T PRK09620         73 --IDLQDKMKSIITH-EKVDAVIMAAAGS   98 (229)
T ss_pred             --HHHHHHHHHHhcc-cCCCEEEECcccc
Confidence              2222233333221 2689999999984

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.41  E-value=4e-07  Score=69.96  Aligned_cols=60  Identities=17%  Similarity=0.117  Sum_probs=48.7

Q ss_pred             HHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706           96 LAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus        96 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++.|+++|++|++++|+.+..+     +        ..++++|++|.++++++++++.   +++|+||||||+..
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC
Confidence            47889999999999999875431     1        2356899999999999988763   68999999999753

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.40  E-value=1.6e-06  Score=67.13  Aligned_cols=84  Identities=18%  Similarity=0.235  Sum_probs=46.7

Q ss_pred             EEcCCchHHHHHHHHHHHcCC--EEEEEecChhh---HHHHHHHHHH-----Hh---CCceEEEEEeeCCCHHH-H-HHH
Q 030706           85 ITGSTKGIGYALAKEFLKAGD--NVIICSRSAER---VDSAVQSLRE-----EF---GEQHVWGTKCDVSEGNE-V-ADL  149 (173)
Q Consensus        85 ItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~---~~~~~~~l~~-----~~---~~~~~~~~~~Dv~~~~~-v-~~~  149 (173)
                      |||++|.||..+.++|++.+.  +|+++.|....   .+...+.+..     ..   ...++.++..|++++.- + +..
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999885  99999997532   2222121111     11   12479999999998641 1 111


Q ss_pred             HHHHHHhcCCccEEEEcccCCC
Q 030706          150 VAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       150 ~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++++.+   .+|+|||||+...
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~   99 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVN   99 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-S
T ss_pred             hhcccc---ccceeeecchhhh
Confidence            222222   5899999998653

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.39  E-value=2.8e-06  Score=64.87  Aligned_cols=75  Identities=21%  Similarity=0.259  Sum_probs=57.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI  162 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  162 (173)
                      ++|+||+|.+|+.+++.|++.|++|.++.|+...  +...+++.. +   +..+.+|+.|.+++.++++       ++|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~-g---~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL-G---AEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT-T---TEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc-c---ceEeecccCCHHHHHHHHc-------CCce
Confidence            6899999999999999999999999999998732  233444433 2   4566999999998887774       7899


Q ss_pred             EEEcccCC
Q 030706          163 WVFMSDLH  170 (173)
Q Consensus       163 lVn~AG~~  170 (173)
                      ||.+.+..
T Consensus        68 v~~~~~~~   75 (233)
T PF05368_consen   68 VFSVTPPS   75 (233)
T ss_dssp             EEEESSCS
T ss_pred             EEeecCcc
Confidence            99887754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PLN00016 RNA-binding protein; Provisional

Probab=98.34  E-value=1.4e-06  Score=71.33  Aligned_cols=82  Identities=28%  Similarity=0.241  Sum_probs=55.2

Q ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----HHHHHHhCCceEEEEEeeCCCHHHHHHHH
Q 030706           79 PPYNVLIT----GSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV----QSLREEFGEQHVWGTKCDVSEGNEVADLV  150 (173)
Q Consensus        79 ~~k~~lIt----Ga~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~  150 (173)
                      ..++++||    ||+|.||..+++.|+++|++|++++|+........    ..+..... ..+.++.+|+.|   ++.++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS-AGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh-cCceEEEecHHH---HHhhh
Confidence            34789999    99999999999999999999999999865422110    00111101 136777888765   33332


Q ss_pred             HHHHHhcCCccEEEEcccC
Q 030706          151 AFAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       151 ~~~~~~~g~id~lVn~AG~  169 (173)
                      .     ...+|+||+++|.
T Consensus       127 ~-----~~~~d~Vi~~~~~  140 (378)
T PLN00016        127 A-----GAGFDVVYDNNGK  140 (378)
T ss_pred             c-----cCCccEEEeCCCC
Confidence            1     1368999998763

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.32  E-value=5.3e-06  Score=58.48  Aligned_cols=77  Identities=19%  Similarity=0.300  Sum_probs=56.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+++++++|.|+ ||.|++++..|.+.|++ |+++.|+.++++++.+.+    +...+.++  ++.+..   ...     
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~--~~~~~~---~~~-----   73 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAI--PLEDLE---EAL-----   73 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEE--EGGGHC---HHH-----
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----Ccccccee--eHHHHH---HHH-----
Confidence            478999999997 89999999999999975 999999998888777766    22134443  333322   222     


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                        ...|++||+.+..
T Consensus        74 --~~~DivI~aT~~~   86 (135)
T PF01488_consen   74 --QEADIVINATPSG   86 (135)
T ss_dssp             --HTESEEEE-SSTT
T ss_pred             --hhCCeEEEecCCC
Confidence              2689999997764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.29  E-value=1.1e-06  Score=68.80  Aligned_cols=68  Identities=25%  Similarity=0.189  Sum_probs=47.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI  162 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  162 (173)
                      +|||||+|.||..+++.|++.|++|++++|+........        .  ..  ..|+.. +.       ..+.+..+|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~--~~--~~~~~~-~~-------~~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------W--EG--YKPWAP-LA-------ESEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------c--ee--eecccc-cc-------hhhhcCCCCE
Confidence            589999999999999999999999999999875432110        0  01  112221 11       1233457999


Q ss_pred             EEEcccCC
Q 030706          163 WVFMSDLH  170 (173)
Q Consensus       163 lVn~AG~~  170 (173)
                      |||+||..
T Consensus        61 Vvh~a~~~   68 (292)
T TIGR01777        61 VINLAGEP   68 (292)
T ss_pred             EEECCCCC
Confidence            99999864

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.29  E-value=5.3e-06  Score=63.66  Aligned_cols=76  Identities=20%  Similarity=0.215  Sum_probs=49.6

Q ss_pred             EEEEEcCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           82 NVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        82 ~~lItGa~-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      +=.||+.+ |+||+++++.|+++|++|+++++.....        .... ..+.++.++     ..+++.+.+.+.++.+
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~~~-~~v~~i~v~-----s~~~m~~~l~~~~~~~   82 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PEPH-PNLSIIEIE-----NVDDLLETLEPLVKDH   82 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CCCC-CCeEEEEEe-----cHHHHHHHHHHHhcCC
Confidence            55777755 5599999999999999999998754210        0001 135555432     2233334444445679


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+||||||+..
T Consensus        83 DivIh~AAvsd   93 (229)
T PRK06732         83 DVLIHSMAVSD   93 (229)
T ss_pred             CEEEeCCccCC
Confidence            99999999864

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.23  E-value=7.5e-06  Score=63.42  Aligned_cols=72  Identities=25%  Similarity=0.276  Sum_probs=59.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .++||||+|.+|.+++++|.++|++|.+..|+++......         ..+.+...|+.+++.+...++       ++|
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~~   65 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GVD   65 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence            5899999999999999999999999999999987765543         147788889999988877664       567


Q ss_pred             EEEEcccC
Q 030706          162 IWVFMSDL  169 (173)
Q Consensus       162 ~lVn~AG~  169 (173)
                      .+++..+.
T Consensus        66 ~~~~i~~~   73 (275)
T COG0702          66 GVLLISGL   73 (275)
T ss_pred             EEEEEecc
Confidence            77666654

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=98.19  E-value=6.3e-06  Score=66.91  Aligned_cols=82  Identities=15%  Similarity=0.160  Sum_probs=58.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .++.+++||||+|.+|++++..|.+.+  .+|.+.|...... ....+.... ...++.++++|+.|..++.+.++    
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~-~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~----   75 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQS-NLPAELTGF-RSGRVTVILGDLLDANSISNAFQ----   75 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccc-ccchhhhcc-cCCceeEEecchhhhhhhhhhcc----
Confidence            456799999999999999999999998  7899988765311 111111111 12368899999999888877764    


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                         +. .+||+|+.
T Consensus        76 ---~~-~Vvh~aa~   85 (361)
T KOG1430|consen   76 ---GA-VVVHCAAS   85 (361)
T ss_pred             ---Cc-eEEEeccc
Confidence               44 56666654

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.17  E-value=2.2e-06  Score=66.70  Aligned_cols=35  Identities=40%  Similarity=0.558  Sum_probs=32.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      ++||||+|.||++++..|.+.|+.|+++.|++...
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~   35 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKA   35 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcch
Confidence            58999999999999999999999999999987653

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.16  E-value=9.2e-06  Score=71.31  Aligned_cols=61  Identities=18%  Similarity=0.057  Sum_probs=48.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      .+++|||||+|.||.++++.|.++|++|..                          ...|++|.+.+.+++++.     +
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------------~~~~l~d~~~v~~~i~~~-----~  428 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------------GKGRLEDRSSLLADIRNV-----K  428 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------------eccccccHHHHHHHHHhh-----C
Confidence            347999999999999999999999987621                          123677888877776654     6


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+|||+|+...
T Consensus       429 pd~Vih~Aa~~~  440 (668)
T PLN02260        429 PTHVFNAAGVTG  440 (668)
T ss_pred             CCEEEECCcccC
Confidence            899999999763

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.15  E-value=1.1e-05  Score=64.87  Aligned_cols=82  Identities=13%  Similarity=0.201  Sum_probs=68.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHH----cCCEEEEEecChhhHHHHHHHHHHHhCC--ceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSAVQSLREEFGE--QHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~----~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      -++|-||+|.-|..+++++..    .|..+.+.+|+++++++..+.+.+..+.  .+...+.+|++|++++.++..+   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence            479999999999999999998    6789999999999999998888776532  1233778999999999998864   


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                          -.+||||+|-.
T Consensus        84 ----~~vivN~vGPy   94 (423)
T KOG2733|consen   84 ----ARVIVNCVGPY   94 (423)
T ss_pred             ----hEEEEeccccc
Confidence                57899999854

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.15  E-value=2.2e-05  Score=63.62  Aligned_cols=83  Identities=25%  Similarity=0.309  Sum_probs=56.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChh--h-HHHHHHHHH-----HHhCCceEEEEEeeCCCH------HH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAE--R-VDSAVQSLR-----EEFGEQHVWGTKCDVSEG------NE  145 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~--~-~~~~~~~l~-----~~~~~~~~~~~~~Dv~~~------~~  145 (173)
                      +++++|||+|.||..+..+|+.+- ++|++..|-.+  . .+.+.+.+.     +.....++..+..|++.+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999888764 79999988443  1 222222222     112235899999999833      33


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccCC
Q 030706          146 VADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       146 v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      ++.+.       +.+|.+||||+..
T Consensus        81 ~~~La-------~~vD~I~H~gA~V   98 (382)
T COG3320          81 WQELA-------ENVDLIIHNAALV   98 (382)
T ss_pred             HHHHh-------hhcceEEecchhh
Confidence            33333       3689999999864

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.13  E-value=5.9e-06  Score=64.64  Aligned_cols=86  Identities=19%  Similarity=0.151  Sum_probs=65.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHH--HhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +|++||||-+|--|..+++.|++.|+.|..+.|.........-.|..  ...+.+++++.+|++|...+.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            68999999999999999999999999999998864322111001111  112346889999999999999999987    


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       ++|-+.|-|+-.
T Consensus        78 -~PdEIYNLaAQS   89 (345)
T COG1089          78 -QPDEIYNLAAQS   89 (345)
T ss_pred             -Cchhheeccccc
Confidence             788888877644

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.09  E-value=2.9e-05  Score=57.69  Aligned_cols=77  Identities=25%  Similarity=0.289  Sum_probs=46.7

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC
Q 030706           78 LPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS  141 (173)
Q Consensus        78 ~~~k~~lItGa----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (173)
                      |.||.+|||+|                +|-+|.++|+.+..+|++|+++..... ...         +. .+..+  ++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------p~-~~~~i--~v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------PP-GVKVI--RVE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------T-TEEEE--E-S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------cc-cceEE--Eec
Confidence            46888888887                468999999999999999999887632 110         11 34443  455


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          142 EGNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       142 ~~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      +.+++.+.+.   +.+..-|++|++|++.
T Consensus        68 sa~em~~~~~---~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   68 SAEEMLEAVK---ELLPSADIIIMAAAVS   93 (185)
T ss_dssp             SHHHHHHHHH---HHGGGGSEEEE-SB--
T ss_pred             chhhhhhhhc---cccCcceeEEEecchh
Confidence            5555554444   4444559999999875

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.07  E-value=2.1e-05  Score=63.66  Aligned_cols=74  Identities=22%  Similarity=0.338  Sum_probs=53.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-C-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKA-G-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.+|+++||||+|.||..++++|+++ | .++++++|+.+.+.....++.           ..|+.   +++       
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-----------~~~i~---~l~-------  210 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-----------GGKIL---SLE-------  210 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-----------cccHH---hHH-------
Confidence            478999999999999999999999864 5 589999998776655544331           11222   122       


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+...|++|+.++...
T Consensus       211 ~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        211 EALPEADIVVWVASMPK  227 (340)
T ss_pred             HHHccCCEEEECCcCCc
Confidence            22346899999998743

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.04  E-value=1.2e-05  Score=67.17  Aligned_cols=79  Identities=27%  Similarity=0.263  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++|||+++ +|.++++.|++.|++|++.+++........+++... +   +.++..+  +...+   .+      
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~-g---~~~~~~~--~~~~~---~~------   66 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE-G---IKVICGS--HPLEL---LD------   66 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc-C---CEEEeCC--CCHHH---hc------
Confidence            5789999999976 999999999999999999998654433344445432 2   2222111  11111   11      


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      ..+|+||+++|+...
T Consensus        67 ~~~d~vV~s~gi~~~   81 (447)
T PRK02472         67 EDFDLMVKNPGIPYT   81 (447)
T ss_pred             CcCCEEEECCCCCCC
Confidence            148999999998654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.03  E-value=2.3e-05  Score=61.33  Aligned_cols=65  Identities=22%  Similarity=0.245  Sum_probs=46.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG  143 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~  143 (173)
                      ...+++.++||||+|+||.+++..|..+|+.|+++|.....-++....+   .+..++..+.-|+..+
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~---~~~~~fel~~hdv~~p   87 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW---IGHPNFELIRHDVVEP   87 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh---ccCcceeEEEeechhH
Confidence            3356789999999999999999999999999999987543322222222   2333566667777654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.98  E-value=6.8e-05  Score=53.54  Aligned_cols=75  Identities=23%  Similarity=0.327  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++++++|+|+ |++|.++++.|.+.| .+|++++|+.+..++..+++...       .+..+..+.+++          
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~----------   78 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-------GIAIAYLDLEEL----------   78 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-------ccceeecchhhc----------
Confidence            55788999997 899999999999996 78999999987776665554321       012333333322          


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ....|+||++....
T Consensus        79 ~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 LAEADLIINTTPVG   92 (155)
T ss_pred             cccCCEEEeCcCCC
Confidence            24789999987653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.91  E-value=0.0001  Score=57.85  Aligned_cols=75  Identities=29%  Similarity=0.413  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++... +  .+.....|     +.         ..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~-~--~~~~~~~~-----~~---------~~  176 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY-G--EIQAFSMD-----EL---------PL  176 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc-C--ceEEechh-----hh---------cc
Confidence            45789999998 69999999999999999999999988877776665432 1  12222111     10         12


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      ...|+|||+.+..
T Consensus       177 ~~~DivInatp~g  189 (270)
T TIGR00507       177 HRVDLIINATSAG  189 (270)
T ss_pred             cCccEEEECCCCC
Confidence            3689999998764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=97.89  E-value=4.3e-05  Score=60.03  Aligned_cols=84  Identities=18%  Similarity=0.172  Sum_probs=65.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ..+|-++-|-||+|.+|+.++.+|++.|..|++-.|..+..   ...++-.+.-.++.++..|+.|+++++++++.    
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~---~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~----  130 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD---PRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH----  130 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc---hhheeecccccceeeeccCCCCHHHHHHHHHh----
Confidence            36788899999999999999999999999999999865432   12222222223699999999999999998863    


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                         -++|||--|--
T Consensus       131 ---sNVVINLIGrd  141 (391)
T KOG2865|consen  131 ---SNVVINLIGRD  141 (391)
T ss_pred             ---CcEEEEeeccc
Confidence               57888877743

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.86  E-value=0.00012  Score=57.69  Aligned_cols=48  Identities=25%  Similarity=0.387  Sum_probs=41.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR  125 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~  125 (173)
                      .+.+|+++|+|+ ||+|++++..|...| .+|++++|+.++.++..+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            367899999997 899999999999999 799999999888777666553

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=97.83  E-value=5.8e-05  Score=63.15  Aligned_cols=93  Identities=17%  Similarity=0.201  Sum_probs=58.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEecChh--hHHH---------HHHHHHHHhCC--ceEEEEEeeCC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAE--RVDS---------AVQSLREEFGE--QHVWGTKCDVS  141 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G---~~V~~~~r~~~--~~~~---------~~~~l~~~~~~--~~~~~~~~Dv~  141 (173)
                      +.+|+++||||+|++|+-+.++|++.-   .+++++-|...  ..++         ..+.+.+..+.  .++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            689999999999999999999999853   37888877431  1111         12222222222  36788888987


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          142 EGNEVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       142 ~~~~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++---.--+.- .-...+|++||+|+-..
T Consensus        90 ~~~LGis~~D~~-~l~~eV~ivih~AAtvr  118 (467)
T KOG1221|consen   90 EPDLGISESDLR-TLADEVNIVIHSAATVR  118 (467)
T ss_pred             CcccCCChHHHH-HHHhcCCEEEEeeeeec
Confidence            654211111110 11237999999998643

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.79  E-value=0.00011  Score=63.12  Aligned_cols=47  Identities=28%  Similarity=0.378  Sum_probs=40.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l  124 (173)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            367899999999 69999999999999999999999887776665543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=97.79  E-value=0.00021  Score=67.42  Aligned_cols=88  Identities=19%  Similarity=0.242  Sum_probs=57.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC----CEEEEEecChhhHHHHHHHHHHH---hC------CceEEEEEeeCCCHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAG----DNVIICSRSAERVDSAVQSLREE---FG------EQHVWGTKCDVSEGNEV  146 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~---~~------~~~~~~~~~Dv~~~~~v  146 (173)
                      .++++|||++|.||..+++.|++.+    .+|+++.|....... .+.+...   ++      ..++.++..|++++.--
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            5789999999999999999999887    789998887533221 1222110   10      12588899999754210


Q ss_pred             --HHHHHHHHHhcCCccEEEEcccCCC
Q 030706          147 --ADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       147 --~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                        ...++++.   ..+|++||||+...
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~ 1073 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVH 1073 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEec
Confidence              11222222   36899999998643

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK06849 hypothetical protein; Provisional

Probab=97.77  E-value=0.00043  Score=57.01  Aligned_cols=83  Identities=16%  Similarity=0.180  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ...|++||||++..+|+.+++.|.+.|++|++++.++..........     . ....+...-.+.+...+.+.++.++.
T Consensus         2 ~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-----d-~~~~~p~p~~d~~~~~~~L~~i~~~~   75 (389)
T PRK06849          2 NTKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-----D-GFYTIPSPRWDPDAYIQALLSIVQRE   75 (389)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-----h-heEEeCCCCCCHHHHHHHHHHHHHHc
Confidence            34689999999999999999999999999999998764432111111     1 22222112234444444444455554


Q ss_pred             CCccEEEEcc
Q 030706          158 KYVDIWVFMS  167 (173)
Q Consensus       158 g~id~lVn~A  167 (173)
                       ++|+||...
T Consensus        76 -~id~vIP~~   84 (389)
T PRK06849         76 -NIDLLIPTC   84 (389)
T ss_pred             -CCCEEEECC
Confidence             489998754

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.71  E-value=0.00012  Score=66.69  Aligned_cols=96  Identities=21%  Similarity=0.300  Sum_probs=71.7

Q ss_pred             CCCCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHH---HHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD---SAVQSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        73 ~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      .+..+-..|.|+|+||-||.|+.++.+|..+|+ .+++++|+.-+..   ..+..+... + .++..-..||+..+....
T Consensus      1761 ~rt~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~-G-VqV~vsT~nitt~~ga~~ 1838 (2376)
T KOG1202|consen 1761 PRTYCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR-G-VQVQVSTSNITTAEGARG 1838 (2376)
T ss_pred             chhhcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc-C-eEEEEecccchhhhhHHH
Confidence            345566789999999999999999999999997 5888888764322   234444443 2 246666678888888888


Q ss_pred             HHHHHHHhcCCccEEEEcccCCC
Q 030706          149 LVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       149 ~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++++. .++|.+-+++|-|.+..
T Consensus      1839 Li~~s-~kl~~vGGiFnLA~VLR 1860 (2376)
T KOG1202|consen 1839 LIEES-NKLGPVGGIFNLAAVLR 1860 (2376)
T ss_pred             HHHHh-hhcccccchhhHHHHHH
Confidence            88775 45688999999887653

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.70  E-value=0.00047  Score=54.62  Aligned_cols=50  Identities=24%  Similarity=0.337  Sum_probs=42.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF  128 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~  128 (173)
                      +.+|.++|.|+ ||.|++++..|+..|. +|++++|+.++.+...+.+....
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            56789999986 7899999999999996 89999999988888877775543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.68  E-value=0.00023  Score=52.55  Aligned_cols=72  Identities=22%  Similarity=0.185  Sum_probs=58.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .+-|.|++|-.|..+.++..++|+.|+.+.|++.+....          ..+..++.||.|++++.+.+       -+.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l-------~g~D   64 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDL-------AGHD   64 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhh-------cCCc
Confidence            477889999999999999999999999999998764321          14667889999998875544       2689


Q ss_pred             EEEEcccCC
Q 030706          162 IWVFMSDLH  170 (173)
Q Consensus       162 ~lVn~AG~~  170 (173)
                      +||..-|..
T Consensus        65 aVIsA~~~~   73 (211)
T COG2910          65 AVISAFGAG   73 (211)
T ss_pred             eEEEeccCC
Confidence            999877665

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.55  E-value=0.00073  Score=53.57  Aligned_cols=81  Identities=23%  Similarity=0.296  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..++.++|+|+++++|.+++..+...|++|++++++.+..+..    .. .+. .   ..+|..+.+..+.+.+...  .
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~-~~~-~---~~~~~~~~~~~~~~~~~~~--~  233 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KE-LGA-D---YVIDYRKEDFVREVRELTG--K  233 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-cCC-C---eEEecCChHHHHHHHHHhC--C
Confidence            3578999999999999999999999999999998887654332    11 121 1   1246666655555544332  1


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|+++|.
T Consensus       234 ~~~d~~i~~~g~  245 (342)
T cd08266         234 RGVDVVVEHVGA  245 (342)
T ss_pred             CCCcEEEECCcH
Confidence            369999999874

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.54  E-value=0.00067  Score=54.48  Aligned_cols=81  Identities=16%  Similarity=0.142  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|.+++|+|++|++|..++..+...|++|+.+.+++++.+...+.+    +...+    .|..+.+++.+.+.+.. . 
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l----Ga~~v----i~~~~~~~~~~~i~~~~-~-  219 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL----GFDDA----FNYKEEPDLDAALKRYF-P-  219 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCcee----EEcCCcccHHHHHHHhC-C-
Confidence            35789999999999999988877778999999888776544332212    22111    23332223333333322 1 


Q ss_pred             CCccEEEEccc
Q 030706          158 KYVDIWVFMSD  168 (173)
Q Consensus       158 g~id~lVn~AG  168 (173)
                      +++|+++++.|
T Consensus       220 ~gvd~v~d~~g  230 (338)
T cd08295         220 NGIDIYFDNVG  230 (338)
T ss_pred             CCcEEEEECCC
Confidence            46899988876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.53  E-value=0.0016  Score=52.84  Aligned_cols=81  Identities=28%  Similarity=0.370  Sum_probs=56.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh---------------------hhHHHHHHHHHHHhCCceEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---------------------ERVDSAVQSLREEFGEQHVWG  135 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~  135 (173)
                      +.+++++|.|+ ||+|..+++.|+..|. ++.++|++.                     .+.+.+.+.+.+..+..++..
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~  100 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP  100 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence            67788999986 7899999999999995 899998863                     234444566666656556667


Q ss_pred             EEeeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          136 TKCDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       136 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      +..|++. +.+++++       ...|++|.+.
T Consensus       101 ~~~~~~~-~~~~~~~-------~~~DlVid~~  124 (338)
T PRK12475        101 VVTDVTV-EELEELV-------KEVDLIIDAT  124 (338)
T ss_pred             EeccCCH-HHHHHHh-------cCCCEEEEcC
Confidence            7667653 3333332       3567777664

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.44  E-value=0.0012  Score=52.37  Aligned_cols=39  Identities=31%  Similarity=0.424  Sum_probs=34.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      .+.+++|+|+++++|+++++.+...|++|+++.++++..
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~  200 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKL  200 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH
Confidence            467899999999999999999999999999988876543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.43  E-value=0.00059  Score=53.56  Aligned_cols=81  Identities=20%  Similarity=0.179  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+++++|+|+++++|.++++.+...|.+|++++++.+..+.. .   . .+...    .+|..+.+..+.+.+.. . .
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~-~g~~~----~~~~~~~~~~~~~~~~~-~-~  211 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-R---Q-AGADA----VFNYRAEDLADRILAAT-A-G  211 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---H-cCCCE----EEeCCCcCHHHHHHHHc-C-C
Confidence            3578999999999999999999999999999999877554333 1   1 12111    24555554444433222 1 2


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      ..+|.+++++|.
T Consensus       212 ~~~d~vi~~~~~  223 (325)
T cd08253         212 QGVDVIIEVLAN  223 (325)
T ss_pred             CceEEEEECCch
Confidence            369999998764

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.42  E-value=0.0013  Score=55.46  Aligned_cols=77  Identities=25%  Similarity=0.289  Sum_probs=52.6

Q ss_pred             CCCCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC
Q 030706           77 MLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV  140 (173)
Q Consensus        77 ~~~~k~~lItGa----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv  140 (173)
                      .+.||.+|||+|                +|-+|+++|+.+..+|++|+++.-... .       .  .+. .+.++  ++
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~--~p~-~v~~i--~V  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A--DPQ-GVKVI--HV  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C--CCC-CceEE--Ee
Confidence            489999999998                367999999999999999998874321 0       0  111 24444  34


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          141 SEGNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       141 ~~~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      ...   +++.+.+.+.+. .|++|.+|++.
T Consensus       320 ~ta---~eM~~av~~~~~-~Di~I~aAAVa  345 (475)
T PRK13982        320 ESA---RQMLAAVEAALP-ADIAIFAAAVA  345 (475)
T ss_pred             cCH---HHHHHHHHhhCC-CCEEEEecccc
Confidence            334   444444444444 69999999875

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.39  E-value=0.00028  Score=53.03  Aligned_cols=47  Identities=28%  Similarity=0.438  Sum_probs=39.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~  123 (173)
                      ..+.||+++|+|.+ .+|+.+++.|.+.|++|++.+++.+..++..+.
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            34789999999985 899999999999999999999987665554443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.39  E-value=0.0018  Score=53.55  Aligned_cols=48  Identities=25%  Similarity=0.370  Sum_probs=41.4

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~  122 (173)
                      ..+.+..+++|+||+|++|+-+++.|.++|..|.++-|+.+..++...
T Consensus        74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            345667899999999999999999999999999999999877666544

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.39  E-value=0.0018  Score=51.25  Aligned_cols=47  Identities=17%  Similarity=0.290  Sum_probs=40.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLR  125 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~  125 (173)
                      +.+|.++|.|+ ||.+++++..|++.|. +|+++.|+.++.+++.+++.
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            56888999976 8999999999999995 79999999888877766553

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.38  E-value=0.0023  Score=52.63  Aligned_cols=76  Identities=26%  Similarity=0.295  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.++.++|.|+ |.+|+..++.+...|++|++++++.+..+....    .++. .   +..+..+.+.+.+.+       
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~----~~g~-~---v~~~~~~~~~l~~~l-------  228 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDA----EFGG-R---IHTRYSNAYEIEDAV-------  228 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----hcCc-e---eEeccCCHHHHHHHH-------
Confidence            35567888877 789999999999999999999998766544322    2222 1   223445555444333       


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      ...|++|+++++
T Consensus       229 ~~aDvVI~a~~~  240 (370)
T TIGR00518       229 KRADLLIGAVLI  240 (370)
T ss_pred             ccCCEEEEcccc
Confidence            357999998855

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.37  E-value=0.0028  Score=50.25  Aligned_cols=49  Identities=16%  Similarity=0.298  Sum_probs=41.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREE  127 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~  127 (173)
                      ..+|.++|.|+ ||-+++++..|++.|+ +|++++|+.++.+++.+.+...
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~  174 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence            55789999987 7999999999999995 7999999998888877766443

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.37  E-value=0.0032  Score=47.36  Aligned_cols=81  Identities=28%  Similarity=0.336  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+++++|.| .||+|..+++.|+..|. ++.++|.+.                   .+.+...+.+.+..+..++..+.
T Consensus        19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            6778889988 57999999999999995 899998762                   23444555665555544455444


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      .++.+ +.+.++       +...|++|.+.
T Consensus        98 ~~i~~-~~~~~~-------~~~~D~Vi~~~  119 (202)
T TIGR02356        98 ERVTA-ENLELL-------INNVDLVLDCT  119 (202)
T ss_pred             hcCCH-HHHHHH-------HhCCCEEEECC
Confidence            44432 222222       23578887765

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.36  E-value=0.0031  Score=44.73  Aligned_cols=77  Identities=21%  Similarity=0.280  Sum_probs=55.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .+.|+|++|.+|..++..|...+  .+++++|++++..+....++....  ...+.....   .+.++           +
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence            57899999999999999999987  579999999887777777776532  211222222   33332           2


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      ..-|++|..||....
T Consensus        68 ~~aDivvitag~~~~   82 (141)
T PF00056_consen   68 KDADIVVITAGVPRK   82 (141)
T ss_dssp             TTESEEEETTSTSSS
T ss_pred             ccccEEEEecccccc
Confidence            368999999998643

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.34  E-value=0.00037  Score=56.28  Aligned_cols=79  Identities=18%  Similarity=0.261  Sum_probs=47.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-------CEEEEEecChhh--HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG-------DNVIICSRSAER--VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G-------~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .++|||++|.+|..++..|+..+       ..|+++++++..  ++....++.+.     ...+..|+....++      
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-----~~~~~~~~~~~~~~------   72 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-----AFPLLKSVVATTDP------   72 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-----cccccCCceecCCH------
Confidence            58999999999999999999855       489999996531  22111111110     00111133222222      


Q ss_pred             HHHhcCCccEEEEcccCCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~~  172 (173)
                       .+.+...|+||+.||+..+
T Consensus        73 -~~~l~~aDiVI~tAG~~~~   91 (325)
T cd01336          73 -EEAFKDVDVAILVGAMPRK   91 (325)
T ss_pred             -HHHhCCCCEEEEeCCcCCC
Confidence             2233479999999998653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.33  E-value=0.0014  Score=51.83  Aligned_cols=49  Identities=27%  Similarity=0.394  Sum_probs=42.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREE  127 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~  127 (173)
                      ..++.++|.|+ ||-+++++..|++.| .+|+++.|+.++.+++.+.+.+.
T Consensus       124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~  173 (283)
T COG0169         124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL  173 (283)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence            46889999986 689999999999999 58999999999988888777654

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.33  E-value=0.0014  Score=53.12  Aligned_cols=81  Identities=14%  Similarity=0.125  Sum_probs=50.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..|.+++|+|++|++|...+......|++|+.+++++++.+....+    .+...    ..|..+.+++.+.+.+..  .
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~----lGa~~----vi~~~~~~~~~~~i~~~~--~  226 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK----LGFDE----AFNYKEEPDLDAALKRYF--P  226 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh----cCCCE----EEECCCcccHHHHHHHHC--C
Confidence            3578999999999999998877777899999888877654332212    22211    123332223333333322  1


Q ss_pred             CCccEEEEccc
Q 030706          158 KYVDIWVFMSD  168 (173)
Q Consensus       158 g~id~lVn~AG  168 (173)
                      +++|+++.+.|
T Consensus       227 ~gvD~v~d~vG  237 (348)
T PLN03154        227 EGIDIYFDNVG  237 (348)
T ss_pred             CCcEEEEECCC
Confidence            36899998876

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.33  E-value=0.0021  Score=50.31  Aligned_cols=81  Identities=21%  Similarity=0.243  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+++++|+|+++++|++++..+...|++|++++++.+..+.. .++    +. .   ..+|..+.+..+++.+.. . .
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g~-~---~~~~~~~~~~~~~~~~~~-~-~  206 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL----GA-D---VAINYRTEDFAEEVKEAT-G-G  206 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc----CC-C---EEEeCCchhHHHHHHHHh-C-C
Confidence            3578999999999999999999999999999998876554332 221    21 1   123444443333333221 1 2


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|+++|.
T Consensus       207 ~~~d~vi~~~g~  218 (323)
T cd05276         207 RGVDVILDMVGG  218 (323)
T ss_pred             CCeEEEEECCch
Confidence            469999998774

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.33  E-value=0.001  Score=56.37  Aligned_cols=45  Identities=24%  Similarity=0.409  Sum_probs=38.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~  122 (173)
                      .+.+++++|+|+ ||+|++++..|++.|++|++++|+.++.++..+
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~  373 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS  373 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            357889999996 799999999999999999999998776655443

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.32  E-value=0.00091  Score=53.60  Aligned_cols=76  Identities=17%  Similarity=0.190  Sum_probs=58.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      ..++|-|++|.-|.-++++|+.+|.+..+.+|+..+++.....|-.     ....+.+++  ++.+++..       .+.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~-----~~~~~p~~~--p~~~~~~~-------~~~   72 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP-----EAAVFPLGV--PAALEAMA-------SRT   72 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc-----cccccCCCC--HHHHHHHH-------hcc
Confidence            5689999999999999999999999999999999988877776632     233344443  55555444       368


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      ++|+||+|-.
T Consensus        73 ~VVlncvGPy   82 (382)
T COG3268          73 QVVLNCVGPY   82 (382)
T ss_pred             eEEEeccccc
Confidence            9999999954

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.32  E-value=0.001  Score=53.05  Aligned_cols=79  Identities=13%  Similarity=0.100  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .|.+++|+|++|++|..++..+...|++|+.+.+++++.+.. .+    .+...    ..|..+.+.+.+.+.+..  .+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~----lGa~~----vi~~~~~~~~~~~~~~~~--~~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KK----LGFDV----AFNYKTVKSLEETLKKAS--PD  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH----cCCCE----EEeccccccHHHHHHHhC--CC
Confidence            578999999999999998877777899999998877654333 22    22211    123333333444443332  13


Q ss_pred             CccEEEEccc
Q 030706          159 YVDIWVFMSD  168 (173)
Q Consensus       159 ~id~lVn~AG  168 (173)
                      ++|+++.+.|
T Consensus       207 gvdvv~d~~G  216 (325)
T TIGR02825       207 GYDCYFDNVG  216 (325)
T ss_pred             CeEEEEECCC
Confidence            6899998876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.32  E-value=0.0016  Score=52.54  Aligned_cols=76  Identities=22%  Similarity=0.274  Sum_probs=47.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-C
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-K  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g  158 (173)
                      |.++||+||+||+|...+......|++++++..+.++.+ .+.   +.+.. .+    .|..+.+    +.+++.+.. |
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~---~lGAd-~v----i~y~~~~----~~~~v~~~t~g  209 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK---ELGAD-HV----INYREED----FVEQVRELTGG  209 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH---hcCCC-EE----EcCCccc----HHHHHHHHcCC
Confidence            899999999999998877777777877666666554433 322   22222 22    2344433    333333333 2


Q ss_pred             -CccEEEEccc
Q 030706          159 -YVDIWVFMSD  168 (173)
Q Consensus       159 -~id~lVn~AG  168 (173)
                       ++|+++...|
T Consensus       210 ~gvDvv~D~vG  220 (326)
T COG0604         210 KGVDVVLDTVG  220 (326)
T ss_pred             CCceEEEECCC
Confidence             5899998776

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.28  E-value=0.0019  Score=53.82  Aligned_cols=76  Identities=17%  Similarity=0.253  Sum_probs=53.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+.+++++|.|+ ||+|..+++.|...| .+++++.|+.++.+....++    +.  ...     ...+++       .+
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~----~~--~~~-----~~~~~l-------~~  238 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF----RN--ASA-----HYLSEL-------PQ  238 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh----cC--CeE-----ecHHHH-------HH
Confidence            377899999997 899999999999999 47999999987766655443    21  111     111222       22


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .....|+|||+.+-..
T Consensus       239 ~l~~aDiVI~aT~a~~  254 (414)
T PRK13940        239 LIKKADIIIAAVNVLE  254 (414)
T ss_pred             HhccCCEEEECcCCCC
Confidence            3346899999987644

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.27  E-value=0.005  Score=50.03  Aligned_cols=81  Identities=30%  Similarity=0.348  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh---------------------hhHHHHHHHHHHHhCCceEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---------------------ERVDSAVQSLREEFGEQHVWG  135 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~  135 (173)
                      +..++++|.|+ ||+|..+++.|+..|. ++.++|.+.                     .+.+...+.+.+..+..++..
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            66778999987 7999999999999995 899998862                     223333455555445445666


Q ss_pred             EEeeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          136 TKCDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       136 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      +..|++. +.+..++       ...|++|.+.
T Consensus       101 ~~~~~~~-~~~~~~~-------~~~DlVid~~  124 (339)
T PRK07688        101 IVQDVTA-EELEELV-------TGVDLIIDAT  124 (339)
T ss_pred             EeccCCH-HHHHHHH-------cCCCEEEEcC
Confidence            6666643 2333332       2467777654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.26  E-value=0.0012  Score=51.63  Aligned_cols=72  Identities=18%  Similarity=0.233  Sum_probs=51.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .++|+||++- |+.+++.|.+.|++|+.+.+++...+...    . .+   ...+..+.-|.+++.+++.+.     ++|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~-~g---~~~v~~g~l~~~~l~~~l~~~-----~i~   67 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----I-HQ---ALTVHTGALDPQELREFLKRH-----SID   67 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----c-cC---CceEEECCCCHHHHHHHHHhc-----CCC
Confidence            6899999998 99999999999999999888775432211    1 11   123445666777776666542     799


Q ss_pred             EEEEcc
Q 030706          162 IWVFMS  167 (173)
Q Consensus       162 ~lVn~A  167 (173)
                      +||+.+
T Consensus        68 ~VIDAt   73 (256)
T TIGR00715        68 ILVDAT   73 (256)
T ss_pred             EEEEcC
Confidence            999865

This enzyme was found to be a monomer by gel filtration.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.24  E-value=0.0046  Score=50.90  Aligned_cols=82  Identities=29%  Similarity=0.307  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC-------------------hhhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+++++|.|+ ||+|..+++.|+..|. ++.++|.+                   ..+.+...+.+.+..+..++..+.
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            56777888865 7999999999999995 89999886                   344555666666655544455554


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMSD  168 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG  168 (173)
                      ..+.+ +.+..++       ...|+||++..
T Consensus       212 ~~~~~-~~~~~~~-------~~~D~Vv~~~d  234 (376)
T PRK08762        212 ERVTS-DNVEALL-------QDVDVVVDGAD  234 (376)
T ss_pred             ccCCh-HHHHHHH-------hCCCEEEECCC
Confidence            44432 2333322       25788887753

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.24  E-value=0.0016  Score=52.24  Aligned_cols=78  Identities=15%  Similarity=0.098  Sum_probs=49.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      .+++|+|++|++|.+++......|+ +|+.+++++++.+...+++    +...+    .|..+ +++.+.+.++..  ++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l----Ga~~v----i~~~~-~~~~~~i~~~~~--~g  224 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL----GFDAA----INYKT-DNVAERLRELCP--EG  224 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc----CCcEE----EECCC-CCHHHHHHHHCC--CC
Confidence            7999999999999998877777898 7999988776544333222    32121    23333 223333333321  46


Q ss_pred             ccEEEEcccC
Q 030706          160 VDIWVFMSDL  169 (173)
Q Consensus       160 id~lVn~AG~  169 (173)
                      +|++|++.|.
T Consensus       225 vd~vid~~g~  234 (345)
T cd08293         225 VDVYFDNVGG  234 (345)
T ss_pred             ceEEEECCCc
Confidence            8999988763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.20  E-value=0.0075  Score=46.17  Aligned_cols=82  Identities=18%  Similarity=0.272  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecC-------------------hhhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +..++++|.| .||+|..+++.|+..| .++.++|.+                   ..+.+...+.+.+..+..++..+.
T Consensus        19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            6677899988 5799999999999999 478887542                   123445566666665655666666


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMSD  168 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG  168 (173)
                      .+++ .+.+.+++       ...|++|.+..
T Consensus        98 ~~i~-~~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          98 ERLD-AENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             ceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence            6663 33333332       35788887754

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.17  E-value=0.0038  Score=49.91  Aligned_cols=75  Identities=19%  Similarity=0.316  Sum_probs=52.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhC--CceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFG--EQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .+.|.|+ |++|.+++..|+..|  .+|++++++++..+....++.+...  ........   .+.++           .
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-----------l   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-----------C   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-----------h
Confidence            5778886 899999999999999  5899999998888777777755421  11122211   22221           1


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      ...|++|+++|...
T Consensus        67 ~~aDIVIitag~~~   80 (306)
T cd05291          67 KDADIVVITAGAPQ   80 (306)
T ss_pred             CCCCEEEEccCCCC
Confidence            37899999999854

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.16  E-value=0.0062  Score=52.00  Aligned_cols=85  Identities=22%  Similarity=0.204  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-------------H
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-------------N  144 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-------------~  144 (173)
                      ..+.+++|.|+ |.+|+..+..+...|++|+++|+++++.+... ++    +.   .++..|..+.             +
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-sl----GA---~~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SM----GA---EFLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----CC---eEEEeccccccccccchhhhcchh
Confidence            45788999986 68999999999899999999999887654332 22    32   2223333221             1


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ..++..+.+.+..+..|++|+++|+-.
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCc
Confidence            122222222333357999999999743

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.16  E-value=0.0051  Score=50.14  Aligned_cols=80  Identities=23%  Similarity=0.250  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|+.+||.||+||+|.+.+.-....|+..+++.++.+.. ++.++    .+...    .+|..+++-++.+-+..   .
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~----lGAd~----vvdy~~~~~~e~~kk~~---~  223 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKK----LGADE----VVDYKDENVVELIKKYT---G  223 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHH----cCCcE----eecCCCHHHHHHHHhhc---C
Confidence            4678999999999999988776666785555555554443 22222    23312    34777744333332211   5


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|+|+-|.|-
T Consensus       224 ~~~DvVlD~vg~  235 (347)
T KOG1198|consen  224 KGVDVVLDCVGG  235 (347)
T ss_pred             CCccEEEECCCC
Confidence            689999999886

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.15  E-value=0.011  Score=45.89  Aligned_cols=82  Identities=21%  Similarity=0.268  Sum_probs=53.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEE
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGT  136 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (173)
                      .+..++++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+...+.+.+..+..++..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            367788999988 899999999999999 5788887532                   2333445556655555455555


Q ss_pred             EeeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          137 KCDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       137 ~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ...+++ +.+..++       ...|+||.+.
T Consensus       108 ~~~i~~-~~~~~~~-------~~~DiVi~~~  130 (245)
T PRK05690        108 NARLDD-DELAALI-------AGHDLVLDCT  130 (245)
T ss_pred             eccCCH-HHHHHHH-------hcCCEEEecC
Confidence            554542 2222222       3567777664

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.14  E-value=0.0028  Score=48.51  Aligned_cols=79  Identities=27%  Similarity=0.286  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+.+++|+|+++ +|++++..+...|.+|++++++++..+..    ... +...    .+|..+.+..+.+.   ....
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~-g~~~----~~~~~~~~~~~~~~---~~~~  199 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA----KEL-GADH----VIDYKEEDLEEELR---LTGG  199 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH----HHh-CCce----eccCCcCCHHHHHH---HhcC
Confidence            4578999999988 99999988888899999999886553332    222 2111    12443333333333   2233


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +.+|++|+++|.
T Consensus       200 ~~~d~vi~~~~~  211 (271)
T cd05188         200 GGADVVIDAVGG  211 (271)
T ss_pred             CCCCEEEECCCC
Confidence            579999999875

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.12  E-value=0.004  Score=49.41  Aligned_cols=41  Identities=24%  Similarity=0.387  Sum_probs=36.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      ..+.|++++|.|. |++|+++++.|...|++|++.+|+.+..
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~  187 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL  187 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            3578999999998 6799999999999999999999987654

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.11  E-value=0.0022  Score=51.70  Aligned_cols=81  Identities=12%  Similarity=0.174  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ++.+.+.|+|++|.||..++..|+..+  .+++++|+..  .+....++.....  .  ....+.+|..++.+.+     
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~--~--~~v~~~td~~~~~~~l-----   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT--P--AKVTGYADGELWEKAL-----   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc--C--ceEEEecCCCchHHHh-----
Confidence            455689999999999999999999766  5899999932  2222223332211  1  1233555544322222     


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                        ...|+||++||...
T Consensus        75 --~gaDvVVitaG~~~   88 (321)
T PTZ00325         75 --RGADLVLICAGVPR   88 (321)
T ss_pred             --CCCCEEEECCCCCC
Confidence              37899999999854

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.08  E-value=0.0064  Score=52.59  Aligned_cols=80  Identities=19%  Similarity=0.274  Sum_probs=59.2

Q ss_pred             CCCCCEEEEEcCC-chHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHH
Q 030706           77 MLPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        77 ~~~~k~~lItGa~-~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      ...++++||||++ +.||.+++..|+..|++|+++..+- +.-.+..+.|-..+  .+..++.+..+..+..+|+++++-
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            4678999999987 6799999999999999999886543 22233333333322  223578888999999999999988


Q ss_pred             HHHh
Q 030706          153 AQKN  156 (173)
Q Consensus       153 ~~~~  156 (173)
                      |..+
T Consensus       473 Ig~e  476 (866)
T COG4982         473 IGDE  476 (866)
T ss_pred             hccc
Confidence            7643

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.08  E-value=0.012  Score=44.70  Aligned_cols=80  Identities=23%  Similarity=0.278  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh------------------hhHHHHHHHHHHHhCCceEEEEEe
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA------------------ERVDSAVQSLREEFGEQHVWGTKC  138 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~  138 (173)
                      +..++++|.|+ ||+|..+++.|+..|. +++++|.+.                  .+.+...+.+.+..+..++..+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            56778899885 7999999999999995 698988762                  234444555555555445555555


Q ss_pred             eCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 030706          139 DVSEGNEVADLVAFAQKNLKYVDIWVFM  166 (173)
Q Consensus       139 Dv~~~~~v~~~~~~~~~~~g~id~lVn~  166 (173)
                      .+++ +.+.+++       ...|++|.+
T Consensus       105 ~i~~-~~~~~~~-------~~~DvVI~a  124 (212)
T PRK08644        105 KIDE-DNIEELF-------KDCDIVVEA  124 (212)
T ss_pred             ecCH-HHHHHHH-------cCCCEEEEC
Confidence            5543 2222222       356777765

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.08  E-value=0.0046  Score=49.09  Aligned_cols=47  Identities=15%  Similarity=0.220  Sum_probs=37.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChh---hHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAE---RVDSAVQSLR  125 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~l~  125 (173)
                      +.+|+++|.|+ ||-+++++..|+..|. +|+++.|+.+   +.+++.+.+.
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            57889999997 5669999999999995 8999999853   5555555543

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.06  E-value=0.0034  Score=49.74  Aligned_cols=40  Identities=23%  Similarity=0.371  Sum_probs=35.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      ..+.||.++|.|.++-.|+.++..|.+.|++|+++.+...
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~  194 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ  194 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence            3578999999999888999999999999999999988443

>PLN00106 malate dehydrogenase

Probab=97.01  E-value=0.002  Score=51.98  Aligned_cols=81  Identities=14%  Similarity=0.197  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ..+++.|+|++|.+|..++..|+..+  .+++++|.++  .+....++......  .  ...++++.+++.+.       
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~--~--~i~~~~~~~d~~~~-------   83 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTP--A--QVRGFLGDDQLGDA-------   83 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcC--c--eEEEEeCCCCHHHH-------
Confidence            34689999999999999999999776  4799999877  22212233322111  1  12244333333332       


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +...|++|+.||+..+
T Consensus        84 l~~aDiVVitAG~~~~   99 (323)
T PLN00106         84 LKGADLVIIPAGVPRK   99 (323)
T ss_pred             cCCCCEEEEeCCCCCC
Confidence            3479999999998654

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.01  E-value=0.027  Score=39.36  Aligned_cols=80  Identities=23%  Similarity=0.361  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC-------------------hhhHHHHHHHHHHHhCCceEEEEEee
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQHVWGTKCD  139 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D  139 (173)
                      .++++|.|+ |++|..+++.|+..|. ++.++|.+                   ..+.+...+.+.+..+..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            356788775 6999999999999995 78888763                   12345556666666666678887777


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706          140 VSEGNEVADLVAFAQKNLKYVDIWVFMSD  168 (173)
Q Consensus       140 v~~~~~v~~~~~~~~~~~g~id~lVn~AG  168 (173)
                      + +.+...+++       ...|++|.+..
T Consensus        81 ~-~~~~~~~~~-------~~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELL-------KDYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHH-------HTSSEEEEESS
T ss_pred             c-ccccccccc-------cCCCEEEEecC
Confidence            7 334444444       25788887643

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.98  E-value=0.0062  Score=50.90  Aligned_cols=45  Identities=24%  Similarity=0.448  Sum_probs=37.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS  123 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~  123 (173)
                      +.+++++|.|+ |.+|..+++.|...|+ +|++++|+.+..+....+
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            67899999986 8999999999999996 899999988776555443

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.98  E-value=0.015  Score=47.63  Aligned_cols=81  Identities=17%  Similarity=0.156  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+++++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+...+.+.+..+..++..+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            66788999987 799999999999999 5888887642                   24455666677666665666666


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..++.. ....++       ...|+||.+.
T Consensus       105 ~~i~~~-~~~~~~-------~~~DvVvd~~  126 (355)
T PRK05597        105 RRLTWS-NALDEL-------RDADVILDGS  126 (355)
T ss_pred             eecCHH-HHHHHH-------hCCCEEEECC
Confidence            666532 222222       2578888765

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.95  E-value=0.017  Score=42.41  Aligned_cols=75  Identities=24%  Similarity=0.287  Sum_probs=47.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh------------------hhHHHHHHHHHHHhCCceEEEEEeeCCCH
Q 030706           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSA------------------ERVDSAVQSLREEFGEQHVWGTKCDVSEG  143 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~  143 (173)
                      ++|.|+ ||+|..+++.|+..|. +++++|.+.                  .+.+...+.+.+..+..++..+...+.. 
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~-   79 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE-   79 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh-
Confidence            567774 8999999999999995 699998764                  2233344555555555456555555533 


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEc
Q 030706          144 NEVADLVAFAQKNLKYVDIWVFM  166 (173)
Q Consensus       144 ~~v~~~~~~~~~~~g~id~lVn~  166 (173)
                      +.+.+++       ...|++|.+
T Consensus        80 ~~~~~~l-------~~~DlVi~~   95 (174)
T cd01487          80 NNLEGLF-------GDCDIVVEA   95 (174)
T ss_pred             hhHHHHh-------cCCCEEEEC
Confidence            2222222       356777765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.94  E-value=0.0071  Score=47.46  Aligned_cols=81  Identities=22%  Similarity=0.209  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+++++|+|+++++|.+++..+...|++|+++.++.+..+.. .+    .+. ..   ..+..+.+..+.+.+. .. .
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~----~g~-~~---~~~~~~~~~~~~~~~~-~~-~  206 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EA----LGA-DI---AINYREEDFVEVVKAE-TG-G  206 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH----cCC-cE---EEecCchhHHHHHHHH-cC-C
Confidence            3578999999999999999998888999999998876554322 21    221 11   1233333333332222 11 1


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|+++|.
T Consensus       207 ~~~d~~i~~~~~  218 (325)
T TIGR02824       207 KGVDVILDIVGG  218 (325)
T ss_pred             CCeEEEEECCch
Confidence            359999998763

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.94  E-value=0.0072  Score=50.44  Aligned_cols=44  Identities=27%  Similarity=0.521  Sum_probs=37.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQ  122 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~  122 (173)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++|+.+..++...
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~  222 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAK  222 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence            67899999997 999999999999999 789999998876554444

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.93  E-value=0.007  Score=49.01  Aligned_cols=74  Identities=22%  Similarity=0.291  Sum_probs=48.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|+.++|+|.+ |+|...++.....|++|+.+++++++.+...+ +    +..  .  ..|-+|.+.++.+-+      
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l----GAd--~--~i~~~~~~~~~~~~~------  228 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L----GAD--H--VINSSDSDALEAVKE------  228 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h----CCc--E--EEEcCCchhhHHhHh------
Confidence            468999999998 99976666555589999999999887654332 2    221  1  123334444444332      


Q ss_pred             CCccEEEEccc
Q 030706          158 KYVDIWVFMSD  168 (173)
Q Consensus       158 g~id~lVn~AG  168 (173)
                       .+|++|++++
T Consensus       229 -~~d~ii~tv~  238 (339)
T COG1064         229 -IADAIIDTVG  238 (339)
T ss_pred             -hCcEEEECCC
Confidence             1788888776

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.93  E-value=0.023  Score=40.07  Aligned_cols=77  Identities=23%  Similarity=0.284  Sum_probs=49.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      ++|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+...+.+.+..+..++..+..++.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~   80 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE   80 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence            677776 8999999999999995 788887541                   2334445556655555456666555543


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccc
Q 030706          143 GNEVADLVAFAQKNLKYVDIWVFMSD  168 (173)
Q Consensus       143 ~~~v~~~~~~~~~~~g~id~lVn~AG  168 (173)
                      ...        .+.+...|++|.+..
T Consensus        81 ~~~--------~~~~~~~diVi~~~d   98 (143)
T cd01483          81 DNL--------DDFLDGVDLVIDAID   98 (143)
T ss_pred             hhH--------HHHhcCCCEEEECCC
Confidence            321        222346788887654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.92  E-value=0.0062  Score=46.60  Aligned_cols=74  Identities=22%  Similarity=0.387  Sum_probs=52.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .++|.|+ |-+|+.+|+.|.+.|++|++++++++..++....   .   .....+.+|-+|++.++++      .....|
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---~---~~~~~v~gd~t~~~~L~~a------gi~~aD   68 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---E---LDTHVVIGDATDEDVLEEA------GIDDAD   68 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---h---cceEEEEecCCCHHHHHhc------CCCcCC
Confidence            4566665 6899999999999999999999998876553321   1   1367778898888876654      112567


Q ss_pred             EEEEccc
Q 030706          162 IWVFMSD  168 (173)
Q Consensus       162 ~lVn~AG  168 (173)
                      ++|...|
T Consensus        69 ~vva~t~   75 (225)
T COG0569          69 AVVAATG   75 (225)
T ss_pred             EEEEeeC
Confidence            7765544

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.91  E-value=0.0083  Score=47.62  Aligned_cols=41  Identities=22%  Similarity=0.333  Sum_probs=34.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..|.+++|+|++|++|.+++......|++|+.+.+++++.+
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~  182 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVA  182 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            35789999999999999988877778999999888776543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.91  E-value=0.01  Score=47.15  Aligned_cols=79  Identities=15%  Similarity=0.164  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+.+++|.|+++++|.+++..+...|++|+.+.++.+..+...+.    .+...    ..|..+.+..+++. +.. . +
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~----~g~~~----~~~~~~~~~~~~v~-~~~-~-~  213 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEE----LGFDA----AINYKTPDLAEALK-EAA-P-D  213 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh----cCCce----EEecCChhHHHHHH-Hhc-c-C
Confidence            578999999999999999988888999999998877554332211    12111    12333333223222 222 1 4


Q ss_pred             CccEEEEccc
Q 030706          159 YVDIWVFMSD  168 (173)
Q Consensus       159 ~id~lVn~AG  168 (173)
                      .+|++|+++|
T Consensus       214 ~~d~vi~~~g  223 (329)
T cd05288         214 GIDVYFDNVG  223 (329)
T ss_pred             CceEEEEcch
Confidence            6899998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd00704 MDH Malate dehydrogenase

Probab=96.91  E-value=0.0041  Score=50.21  Aligned_cols=75  Identities=17%  Similarity=0.226  Sum_probs=48.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-C------EEEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHH--HHH--H
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG-D------NVIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGN--EVA--D  148 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G-~------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~--~v~--~  148 (173)
                      .+.|+|++|.+|..++..|+..| +      .++++|+++  +..                .....|+.|..  ...  .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~----------------~g~~~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL----------------EGVVMELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc----------------ceeeeehhhhcccccCCcE
Confidence            57899999999999999999876 2      499999876  322                22234444431  000  0


Q ss_pred             HHHHHHHhcCCccEEEEcccCCCC
Q 030706          149 LVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       149 ~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      +.....+.+...|++|+.||...+
T Consensus        66 i~~~~~~~~~~aDiVVitAG~~~~   89 (323)
T cd00704          66 ITTDPEEAFKDVDVAILVGAFPRK   89 (323)
T ss_pred             EecChHHHhCCCCEEEEeCCCCCC
Confidence            001223344579999999998653

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.88  E-value=0.0069  Score=50.69  Aligned_cols=59  Identities=20%  Similarity=0.369  Sum_probs=42.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      .++|.|+ |.+|+.+++.|.+.|..|++++++++..+...+..       .+.++..|.++.+.+++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-------~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-------DVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-------CEEEEEeCCCCHHHHHH
Confidence            5788887 89999999999999999999999887655433211       24455566666554443

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.88  E-value=0.0055  Score=49.44  Aligned_cols=76  Identities=14%  Similarity=0.251  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .+++++|+|+ |++|...+..+...|+ +|+++++++++.+.. .+    .+...    ..|..+. ++.+    +.+..
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~----lGa~~----vi~~~~~-~~~~----~~~~~  233 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-RE----MGADK----LVNPQND-DLDH----YKAEK  233 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HH----cCCcE----EecCCcc-cHHH----HhccC
Confidence            5789999986 8999998887777897 688899887665432 22    23211    1243332 2222    22233


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      |.+|++|.++|.
T Consensus       234 g~~D~vid~~G~  245 (343)
T PRK09880        234 GYFDVSFEVSGH  245 (343)
T ss_pred             CCCCEEEECCCC
Confidence            569999999884

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.88  E-value=0.0062  Score=56.02  Aligned_cols=77  Identities=21%  Similarity=0.241  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CE-------------EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG-DN-------------VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G-~~-------------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~  144 (173)
                      ..|.++|.|+ |.||...++.|++.. +.             |++++++.+..++..+.+    .  ++..+++|++|.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~--~~~~v~lDv~D~e  640 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----E--NAEAVQLDVSDSE  640 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----C--CCceEEeecCCHH
Confidence            3678999996 899999999998863 33             788888876665544432    2  3567899999998


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~  169 (173)
                      ++.++++       .+|+||++...
T Consensus       641 ~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        641 SLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHhhc-------CCCEEEECCCc
Confidence            8776654       48999998653

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=96.86  E-value=0.0034  Score=48.03  Aligned_cols=62  Identities=18%  Similarity=0.232  Sum_probs=45.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.++|||++|-+|.+|.+.+.++|.   +.++.+.                       -.+|+++.++++++|+..    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-----------------------kd~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-----------------------KDADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-----------------------ccccccchHHHHHHHhcc----
Confidence            6799999999999999999998874   2222211                       157899999999998775    


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       ++-.||+.|+..
T Consensus        55 -kPthVIhlAAmV   66 (315)
T KOG1431|consen   55 -KPTHVIHLAAMV   66 (315)
T ss_pred             -CCceeeehHhhh
Confidence             455566666543

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.83  E-value=0.024  Score=42.60  Aligned_cols=35  Identities=29%  Similarity=0.414  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~  113 (173)
                      +..++++|.|+ ||+|..++..|+..|. +++++|.+
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            56778999987 7899999999999996 79999876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.83  E-value=0.0095  Score=46.79  Aligned_cols=41  Identities=34%  Similarity=0.454  Sum_probs=35.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..+++++|+|+++++|.+++..+...|++|++++++.+..+
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~  183 (328)
T cd08268         143 RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD  183 (328)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            35789999999999999999999999999999988765544

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.78  E-value=0.012  Score=47.20  Aligned_cols=45  Identities=27%  Similarity=0.425  Sum_probs=37.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQS  123 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~  123 (173)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++...+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~  221 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE  221 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence            57889999987 899999999999877 5799999988776555444

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN00203 glutamyl-tRNA reductase

Probab=96.78  E-value=0.011  Score=50.63  Aligned_cols=46  Identities=26%  Similarity=0.452  Sum_probs=39.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l  124 (173)
                      +.++.++|.|+ |.+|..+++.|...|. +|+++.|+.+..+....++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            67899999998 9999999999999996 7999999987776655443

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.78  E-value=0.028  Score=46.23  Aligned_cols=81  Identities=21%  Similarity=0.318  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecC-------------------hhhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+.+++|.|+ ||+|..+++.|+..| .+++++|.+                   ..+.+...+.+.+..+..++..+.
T Consensus        39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~  117 (370)
T PRK05600         39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR  117 (370)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence            66778888876 699999999999999 589998875                   123444555566555554566665


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..++ .+.+.+++       ...|+||.+.
T Consensus       118 ~~i~-~~~~~~~~-------~~~DlVid~~  139 (370)
T PRK05600        118 ERLT-AENAVELL-------NGVDLVLDGS  139 (370)
T ss_pred             eecC-HHHHHHHH-------hCCCEEEECC
Confidence            5554 22333332       2578887764

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=96.77  E-value=0.0073  Score=46.84  Aligned_cols=74  Identities=24%  Similarity=0.245  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HHHH----HHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-VQSL----REEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~l----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ..|++||||-+|-=|..+++.|+..|+.|-.+-|........ ++.+    ....+ ......-.|++|...+.++++.+
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~-~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNG-ASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhccc-ceeEEeeccccchHHHHHHHhcc
Confidence            347999999999999999999999999998776654333211 1222    11112 35667778999999999999887

>PRK08223 hypothetical protein; Validated

Probab=96.75  E-value=0.02  Score=45.37  Aligned_cols=81  Identities=16%  Similarity=0.190  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +....++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+...+.+.+..+..++..+.
T Consensus        25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            56778888876 699999999999999 5888887641                   23344455666655655666666


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..++.. .+.+++       ...|+||.+.
T Consensus       104 ~~l~~~-n~~~ll-------~~~DlVvD~~  125 (287)
T PRK08223        104 EGIGKE-NADAFL-------DGVDVYVDGL  125 (287)
T ss_pred             cccCcc-CHHHHH-------hCCCEEEECC
Confidence            566532 233333       2568877654

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.75  E-value=0.043  Score=41.61  Aligned_cols=42  Identities=33%  Similarity=0.507  Sum_probs=36.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~  123 (173)
                      ++.|.||+|.+|.+++..|++.|++|++.+|+++..+.....
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            478999999999999999999999999999988776655443

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.73  E-value=0.029  Score=47.93  Aligned_cols=81  Identities=22%  Similarity=0.203  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC-------------CHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS-------------EGN  144 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-------------~~~  144 (173)
                      ..+.+++|.|+ |.+|...+..+...|+.|++++++.+..+... .+    +   ..++..|..             ..+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~l----G---a~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SM----G---AEFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----C---CeEEeccccccccccccceeecCHH
Confidence            44578999985 89999999999999999999999887543322 12    2   223344432             133


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcc
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..++..+.+.+.....|++|+++
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~Ta  255 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTA  255 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECc
Confidence            44444455555567899999999

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.72  E-value=0.034  Score=43.03  Aligned_cols=81  Identities=26%  Similarity=0.313  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+.+++|.|+ ||+|..+++.|+..| .+++++|.+.                   .+.+...+.+.+..+..++..+.
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            66778888875 699999999999999 5888887642                   12344455566555554555554


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..+++ +.+.+++       ...|++|.+.
T Consensus       101 ~~i~~-~~~~~~~-------~~~DlVvd~~  122 (240)
T TIGR02355       101 AKLDD-AELAALI-------AEHDIVVDCT  122 (240)
T ss_pred             ccCCH-HHHHHHh-------hcCCEEEEcC
Confidence            33432 2233322       3567777654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.72  E-value=0.0092  Score=40.30  Aligned_cols=58  Identities=24%  Similarity=0.340  Sum_probs=40.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHH
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADL  149 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~  149 (173)
                      ++|.|. |.+|+.+++.|.+.+.+|++++.+++..+...+.        .+.++.+|.++++.++++
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~--------~~~~i~gd~~~~~~l~~a   58 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE--------GVEVIYGDATDPEVLERA   58 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT--------TSEEEES-TTSHHHHHHT
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc--------ccccccccchhhhHHhhc
Confidence            467776 5799999999999777999999998765444321        144666777777766543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.71  E-value=0.012  Score=46.84  Aligned_cols=39  Identities=28%  Similarity=0.408  Sum_probs=34.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~  116 (173)
                      .+.+++++|.|. |++|+.++..|...|++|++++|+.+.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            357899999997 679999999999999999999998654

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.68  E-value=0.026  Score=45.40  Aligned_cols=78  Identities=14%  Similarity=0.184  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHhCC-ceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .++.+.|+|+ |.+|..++..|+..|.  .++++|++++.++....++.....- .++... .  .+.+           
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~-----------   69 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYS-----------   69 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHH-----------
Confidence            3568999998 9999999999999884  7999999888877777777654221 122221 1  2222           


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+..-|++|..||...
T Consensus        70 ~~~~adivIitag~~~   85 (315)
T PRK00066         70 DCKDADLVVITAGAPQ   85 (315)
T ss_pred             HhCCCCEEEEecCCCC
Confidence            1236899999998854

>PRK08328 hypothetical protein; Provisional

Probab=96.68  E-value=0.041  Score=42.23  Aligned_cols=35  Identities=23%  Similarity=0.415  Sum_probs=29.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~  113 (173)
                      +.+++++|.|+ ||+|.++++.|+..| .+++++|.+
T Consensus        25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            56778888875 699999999999999 578888754

>PRK05086 malate dehydrogenase; Provisional

Probab=96.67  E-value=0.0026  Score=51.10  Aligned_cols=35  Identities=26%  Similarity=0.362  Sum_probs=28.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH-c--CCEEEEEecChh
Q 030706           81 YNVLITGSTKGIGYALAKEFLK-A--GDNVIICSRSAE  115 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~-~--G~~V~~~~r~~~  115 (173)
                      +.++|.|++|++|.+++..|.. .  +..+++.++++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            3689999999999999998855 2  357888888743

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.65  E-value=0.0084  Score=43.87  Aligned_cols=43  Identities=21%  Similarity=0.393  Sum_probs=36.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      .+.+|+++|.|++.-+|..+++.|.++|++|+++.|+.+.+.+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~   83 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE   83 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH
Confidence            4889999999996667999999999999999999998654433

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.64  E-value=0.026  Score=47.82  Aligned_cols=77  Identities=17%  Similarity=0.155  Sum_probs=50.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.++.++|.|+ |++|.++|+.|.+.|++|+++++... ......+.+++. +   +.++..+-..             .
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~-g---v~~~~~~~~~-------------~   75 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL-G---ATVRLGPGPT-------------L   75 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc-C---CEEEECCCcc-------------c
Confidence            56789999986 77999999999999999999986543 222333444432 1   3333222111             0


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      ....|.||...|+.+.
T Consensus        76 ~~~~D~Vv~s~Gi~~~   91 (480)
T PRK01438         76 PEDTDLVVTSPGWRPD   91 (480)
T ss_pred             cCCCCEEEECCCcCCC
Confidence            1257899998888653

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.63  E-value=0.025  Score=45.46  Aligned_cols=77  Identities=17%  Similarity=0.269  Sum_probs=49.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      ++|.|+ ||+|-++++.|+..| .++.++|.+.                   .+.+...+.+.+..+..++..+..++.+
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~   80 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD   80 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence            677775 899999999999999 5788887531                   2333445555555555566666667765


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          143 GNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       143 ~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      .....++       +...|+||++.
T Consensus        81 ~~~~~~f-------~~~~DvVv~a~   98 (312)
T cd01489          81 PDFNVEF-------FKQFDLVFNAL   98 (312)
T ss_pred             ccchHHH-------HhcCCEEEECC
Confidence            3211222       23678888764

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.61  E-value=0.032  Score=42.92  Aligned_cols=82  Identities=18%  Similarity=0.204  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+.+++|.|. ||+|..+++.|+..| .+++++|.+.                   .+.+.+.+.+.+..+..++..+.
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            55677888875 699999999999999 5888887542                   13344455555555554566555


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..++ ++....++.      ...|++|.+.
T Consensus        88 ~~i~-~~~~~~l~~------~~~D~Vvdai  110 (231)
T cd00755          88 EFLT-PDNSEDLLG------GDPDFVVDAI  110 (231)
T ss_pred             eecC-HhHHHHHhc------CCCCEEEEcC
Confidence            5554 233333331      2578888764

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.61  E-value=0.038  Score=43.44  Aligned_cols=83  Identities=14%  Similarity=0.208  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+..++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+.+.+.+....+..++..+.
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            56778888875 699999999999999 6888887641                   11223344444444544454442


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMSD  168 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG  168 (173)
                       +.-+++.+..++.      ...|+||.+.+
T Consensus       107 -~~i~~e~~~~ll~------~~~D~VIdaiD  130 (268)
T PRK15116        107 -DFITPDNVAEYMS------AGFSYVIDAID  130 (268)
T ss_pred             -cccChhhHHHHhc------CCCCEEEEcCC
Confidence             2223444444331      25788887754

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.60  E-value=0.038  Score=39.92  Aligned_cols=85  Identities=21%  Similarity=0.222  Sum_probs=55.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH-------HHHhCCceEEEEEeeCCCHHHHHHHHHH--
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL-------REEFGEQHVWGTKCDVSEGNEVADLVAF--  152 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l-------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~--  152 (173)
                      ++-+.|- |-+|..+++.|++.|++|++.+|++++.++..+.-       .+...  ....+..=+.+.+++++++..  
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~--~~dvvi~~v~~~~~v~~v~~~~~   79 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAE--QADVVILCVPDDDAVEAVLFGEN   79 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHH--HBSEEEE-SSSHHHHHHHHHCTT
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhh--cccceEeecccchhhhhhhhhhH
Confidence            5666665 78999999999999999999999987776654321       10000  123334457888888888887  


Q ss_pred             HHHhcCCccEEEEcccC
Q 030706          153 AQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~  169 (173)
                      +......=.++|++.-+
T Consensus        80 i~~~l~~g~iiid~sT~   96 (163)
T PF03446_consen   80 ILAGLRPGKIIIDMSTI   96 (163)
T ss_dssp             HGGGS-TTEEEEE-SS-
T ss_pred             HhhccccceEEEecCCc
Confidence            66665555667765543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=96.52  E-value=0.0023  Score=50.32  Aligned_cols=84  Identities=15%  Similarity=0.127  Sum_probs=59.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|.++||||.|.||...+..++..-  .+.+.++.-.-...  ...++..-...+..+++.|+.+...+..++..     
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----   78 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----   78 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhccCCCceEeeccccchHHHHhhhcc-----
Confidence            3889999999999999999998863  56666554211111  22222222345799999999999988877654     


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      ..+|.|||-|+..
T Consensus        79 ~~id~vihfaa~t   91 (331)
T KOG0747|consen   79 EEIDTVIHFAAQT   91 (331)
T ss_pred             CchhhhhhhHhhh
Confidence            3799999988754

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.51  E-value=0.0051  Score=38.72  Aligned_cols=33  Identities=30%  Similarity=0.335  Sum_probs=21.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HcCCEEEEEecC
Q 030706           81 YNVLITGSTKGIGYALAKEFL-KAGDNVIICSRS  113 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~-~~G~~V~~~~r~  113 (173)
                      |++||+|+++|.|++..-.++ ..|++.+.+...
T Consensus        40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            899999999999999444444 457777766643

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.50  E-value=0.02  Score=45.19  Aligned_cols=79  Identities=18%  Similarity=0.161  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+..++|+|+++++|.+++..+...|++|+.++++.+..+.. .+    .+. ..   ..|..+.+..+.+.+. . ...
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~----~g~-~~---~~~~~~~~~~~~~~~~-~-~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RA----LGA-DV---AVDYTRPDWPDQVREA-L-GGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH----cCC-CE---EEecCCccHHHHHHHH-c-CCC
Confidence            467899999999999999888888899999998877654332 22    221 11   1244443333332221 1 112


Q ss_pred             CccEEEEccc
Q 030706          159 YVDIWVFMSD  168 (173)
Q Consensus       159 ~id~lVn~AG  168 (173)
                      .+|+++++.|
T Consensus       211 ~~d~vl~~~g  220 (324)
T cd08244         211 GVTVVLDGVG  220 (324)
T ss_pred             CceEEEECCC
Confidence            5899998865

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.50  E-value=0.025  Score=46.90  Aligned_cols=42  Identities=19%  Similarity=0.226  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSAERVDSA  120 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~  120 (173)
                      .|.+++|.|++|++|...+..+...|+   +|+++++++++.+..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            467899999999999987776555543   799999988765543

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.44  E-value=0.031  Score=45.59  Aligned_cols=80  Identities=15%  Similarity=0.149  Sum_probs=50.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~  155 (173)
                      ..|.+++|+|+ |+||...+..+...|+ +|+++++++++.+.. .++    +...    ..|..+ .+++.+.+.++..
T Consensus       184 ~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~----Ga~~----~i~~~~~~~~~~~~v~~~~~  253 (368)
T TIGR02818       184 EEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL----GATD----CVNPNDYDKPIQEVIVEITD  253 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh----CCCe----EEcccccchhHHHHHHHHhC
Confidence            35789999975 8999998887777898 799998887664433 222    2211    224332 2233333333322


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +.+|++|.++|.
T Consensus       254 --~g~d~vid~~G~  265 (368)
T TIGR02818       254 --GGVDYSFECIGN  265 (368)
T ss_pred             --CCCCEEEECCCC
Confidence              368999998874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.43  E-value=0.06  Score=45.27  Aligned_cols=38  Identities=26%  Similarity=0.422  Sum_probs=33.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      ++.|.||.|+||.++++.|.+.|++|++.+|+++...+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~   39 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE   39 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence            58899999999999999999999999999998765433

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.42  E-value=0.016  Score=46.42  Aligned_cols=79  Identities=20%  Similarity=0.200  Sum_probs=49.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ..|.+++|+|+ |++|..++..+...|++ |+++++++++.+.. .++    +...    .+|..+.+ .+++.+ ... 
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~----ga~~----~i~~~~~~-~~~~~~-~~~-  228 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL----GADF----VINSGQDD-VQEIRE-LTS-  228 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh----CCCE----EEcCCcch-HHHHHH-HhC-
Confidence            35789999986 89999998888888988 99988877654332 222    2211    23444433 333322 111 


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      ...+|++|.+.|.
T Consensus       229 ~~~~d~vid~~g~  241 (339)
T cd08239         229 GAGADVAIECSGN  241 (339)
T ss_pred             CCCCCEEEECCCC
Confidence            1268999988764

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.42  E-value=0.058  Score=41.58  Aligned_cols=78  Identities=19%  Similarity=0.269  Sum_probs=49.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      ++|.| .||+|-++++.|+..| .++.++|.+.                   .+.+.+.+.+.+..+..++..+..++.+
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            56666 6799999999999999 5788887642                   1233334455555555567777767754


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          143 GNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       143 ~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      .+....      +-+.++|++|++.
T Consensus        81 ~~~~~~------~f~~~~DvVi~a~   99 (234)
T cd01484          81 EQDFND------TFFEQFHIIVNAL   99 (234)
T ss_pred             hhhchH------HHHhCCCEEEECC
Confidence            332211      1234689888763

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK04148 hypothetical protein; Provisional

Probab=96.41  E-value=0.012  Score=41.45  Aligned_cols=56  Identities=18%  Similarity=0.186  Sum_probs=40.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~  144 (173)
                      +++.+++.|.+  .|.+++..|.+.|++|+++|.++...+...+.        .+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCCCC
Confidence            34678999976  67788999999999999999998765444222        2455566665543

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=96.39  E-value=0.029  Score=36.13  Aligned_cols=35  Identities=29%  Similarity=0.577  Sum_probs=30.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEec
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSR  112 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r  112 (173)
                      .+.+|+++|.|. |+.|+.++..|.+. +.+|.+.+|
T Consensus        20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            377899999998 99999999999998 578888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.39  E-value=0.075  Score=39.84  Aligned_cols=81  Identities=20%  Similarity=0.287  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh---------------------hhHHHHHHHHHHHhCCceEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA---------------------ERVDSAVQSLREEFGEQHVWG  135 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~  135 (173)
                      +...+++|.|++ |+|..+++.|+..| .++.++|.+.                     .+.+...+.+++..+..++..
T Consensus        17 L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            556778888765 69999999999999 4788887541                     122334455666556555665


Q ss_pred             EEeeCCC-HHHHHHHHHHHHHhcCCccEEEEc
Q 030706          136 TKCDVSE-GNEVADLVAFAQKNLKYVDIWVFM  166 (173)
Q Consensus       136 ~~~Dv~~-~~~v~~~~~~~~~~~g~id~lVn~  166 (173)
                      +..++.+ .+...+++       ...|++|.+
T Consensus        96 ~~~~~~~~~~~~~~~~-------~~~dvVi~~  120 (198)
T cd01485          96 VEEDSLSNDSNIEEYL-------QKFTLVIAT  120 (198)
T ss_pred             EecccccchhhHHHHH-------hCCCEEEEC
Confidence            5555542 22222222       357888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.36  E-value=0.053  Score=37.46  Aligned_cols=81  Identities=23%  Similarity=0.353  Sum_probs=53.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-cCCEEE-EEecChh-hH----H-------------HHHHHHHHHhCCceEEEEEeeCC
Q 030706           82 NVLITGSTKGIGYALAKEFLK-AGDNVI-ICSRSAE-RV----D-------------SAVQSLREEFGEQHVWGTKCDVS  141 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~-~G~~V~-~~~r~~~-~~----~-------------~~~~~l~~~~~~~~~~~~~~Dv~  141 (173)
                      .+.|.|++|-+|+.+++.+.+ .+.+++ .++++.+ ..    .             ...+++... .  .   +.+|++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-~--D---VvIDfT   75 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-A--D---VVIDFT   75 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH----S---EEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-C--C---EEEEcC
Confidence            588999999999999999999 577755 4566551 00    0             011222111 1  1   456999


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          142 EGNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       142 ~~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      .++.+...++.+.+.  ++.+|+-..|..
T Consensus        76 ~p~~~~~~~~~~~~~--g~~~ViGTTG~~  102 (124)
T PF01113_consen   76 NPDAVYDNLEYALKH--GVPLVIGTTGFS  102 (124)
T ss_dssp             -HHHHHHHHHHHHHH--T-EEEEE-SSSH
T ss_pred             ChHHhHHHHHHHHhC--CCCEEEECCCCC
Confidence            999999999888877  788888777763

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.33  E-value=0.043  Score=46.04  Aligned_cols=78  Identities=15%  Similarity=0.195  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++|+|.+ ++|.++++.|+++|+.|++.+......  ...+++....  .+.++..+.. ..    .+       
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~--gi~~~~g~~~-~~----~~-------   65 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFD--GLVFYTGRLK-DA----LD-------   65 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccC--CcEEEeCCCC-HH----HH-------
Confidence            457899999975 899999999999999999998765431  1223332111  2333322211 11    11       


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      ...|.||...|+...
T Consensus        66 ~~~d~vv~spgi~~~   80 (445)
T PRK04308         66 NGFDILALSPGISER   80 (445)
T ss_pred             hCCCEEEECCCCCCC
Confidence            257999999998754

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.31  E-value=0.041  Score=43.17  Aligned_cols=40  Identities=35%  Similarity=0.428  Sum_probs=34.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      ..+.+++|.|+++++|.+++......|++|+.+..+++..
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  180 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA  180 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            3578999999999999999888888899999888876553

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.31  E-value=0.059  Score=40.37  Aligned_cols=80  Identities=24%  Similarity=0.371  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +..++++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+...+.+++..+..++..+.
T Consensus        19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            56678888875 669999999999999 4788887541                   12344455566666654555554


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..+.+  ...++       +.+.|++|.+.
T Consensus        98 ~~~~~--~~~~~-------~~~~dvVi~~~  118 (197)
T cd01492          98 DDISE--KPEEF-------FSQFDVVVATE  118 (197)
T ss_pred             cCccc--cHHHH-------HhCCCEEEECC
Confidence            44431  11122       23578887654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PLN02740 Alcohol dehydrogenase-like

Probab=96.29  E-value=0.035  Score=45.48  Aligned_cols=80  Identities=16%  Similarity=0.141  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~  155 (173)
                      ..|.+++|.|+ |+||...+..+...|+ +|+++++++++.+.. .+    .+...    .+|..+. +++.+.+.++..
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~----~Ga~~----~i~~~~~~~~~~~~v~~~~~  266 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KE----MGITD----FINPKDSDKPVHERIREMTG  266 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HH----cCCcE----EEecccccchHHHHHHHHhC
Confidence            45789999985 8999998888778898 699998887664433 22    22211    1243332 123333333322


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +.+|++|.++|.
T Consensus       267 --~g~dvvid~~G~  278 (381)
T PLN02740        267 --GGVDYSFECAGN  278 (381)
T ss_pred             --CCCCEEEECCCC
Confidence              269999999884

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.28  E-value=0.025  Score=47.31  Aligned_cols=63  Identities=27%  Similarity=0.365  Sum_probs=46.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVA  147 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~  147 (173)
                      ...+.++|.|+ |.+|+.+++.|.+.|.+|++++++++..+...++    +.  .+.++..|.++.+.++
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~--~~~~i~gd~~~~~~L~  291 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LP--NTLVLHGDGTDQELLE  291 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CC--CCeEEECCCCCHHHHH
Confidence            44678999998 8999999999999999999999988765544332    11  2445566777666544

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.27  E-value=0.021  Score=42.15  Aligned_cols=43  Identities=28%  Similarity=0.477  Sum_probs=33.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR  125 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~  125 (173)
                      ++.|.|+ |-+|..++..++..|++|.+.+++++.++...+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            3567776 899999999999999999999999887766555444

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.25  E-value=0.032  Score=46.66  Aligned_cols=40  Identities=18%  Similarity=0.267  Sum_probs=35.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      .+.|++++|.|. |.||+.++..+...|++|+++++++...
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            478999999996 6899999999999999999999887553

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.25  E-value=0.03  Score=44.49  Aligned_cols=41  Identities=27%  Similarity=0.234  Sum_probs=34.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..+..++|.|+++++|.+++......|++|+.+.++++..+
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~  178 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE  178 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence            45789999999999999988888888999999888765543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.23  E-value=0.028  Score=45.81  Aligned_cols=80  Identities=16%  Similarity=0.184  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~  155 (173)
                      ..|.+++|.|+ |++|...+..+...|+ +|+++++++++.+.. .+    .+...    ..|..+. +++.+.+.++..
T Consensus       185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~----lGa~~----~i~~~~~~~~~~~~v~~~~~  254 (368)
T cd08300         185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KK----FGATD----CVNPKDHDKPIQQVLVEMTD  254 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HH----cCCCE----EEcccccchHHHHHHHHHhC
Confidence            35789999975 8999998888888898 699999887765432 22    22211    1243332 234444444332


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +++|++|.+.|-
T Consensus       255 --~g~d~vid~~g~  266 (368)
T cd08300         255 --GGVDYTFECIGN  266 (368)
T ss_pred             --CCCcEEEECCCC
Confidence              369999998773

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.21  E-value=0.034  Score=43.41  Aligned_cols=45  Identities=16%  Similarity=0.324  Sum_probs=37.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC----CEEEEEecChhhHHHHHHHHHHH
Q 030706           83 VLITGSTKGIGYALAKEFLKAG----DNVIICSRSAERVDSAVQSLREE  127 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~  127 (173)
                      +.|.|++|.+|..++..|+..|    .+|++.|.+++.++....++...
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~   49 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDA   49 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHh
Confidence            3688998899999999999988    68999999887777766666543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK14851 hypothetical protein; Provisional

Probab=96.20  E-value=0.072  Score=47.24  Aligned_cols=81  Identities=12%  Similarity=0.105  Sum_probs=55.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+.+++|.| .||+|..+++.|+..| .++.++|.+.                   .+.+...+.+.+..+..++..+.
T Consensus        41 L~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~  119 (679)
T PRK14851         41 LAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP  119 (679)
T ss_pred             HhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence            6778899998 5799999999999999 5788876531                   22333445555555655677777


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..++ .+.+..+++       ++|+||.+.
T Consensus       120 ~~i~-~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        120 AGIN-ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             cCCC-hHHHHHHHh-------CCCEEEECC
Confidence            7775 344444443       578888765

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.19  E-value=0.018  Score=46.58  Aligned_cols=76  Identities=16%  Similarity=0.170  Sum_probs=48.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC-C------EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHH--HHH--H
Q 030706           83 VLITGSTKGIGYALAKEFLKAG-D------NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVA--DLV--A  151 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G-~------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~--~~~--~  151 (173)
                      +.|+|++|.+|..++..|+..| +      .++++|+++...              .......|+.|.....  ...  .
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~~   67 (324)
T TIGR01758         2 VVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPTH   67 (324)
T ss_pred             EEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceeccC
Confidence            7899999999999999999866 2      599999865320              1222344555444110  000  0


Q ss_pred             HHHHhcCCccEEEEcccCCCC
Q 030706          152 FAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       152 ~~~~~~g~id~lVn~AG~~~~  172 (173)
                      ...+.+...|++|+.||...+
T Consensus        68 ~~~~~~~~aDiVVitAG~~~~   88 (324)
T TIGR01758        68 DPAVAFTDVDVAILVGAFPRK   88 (324)
T ss_pred             ChHHHhCCCCEEEEcCCCCCC
Confidence            113444679999999998643

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.18  E-value=0.037  Score=44.78  Aligned_cols=35  Identities=26%  Similarity=0.296  Sum_probs=29.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      ..+++++|+|+ |++|...+..+...|++|++++++
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            36789999985 999999887777779999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.17  E-value=0.072  Score=43.02  Aligned_cols=40  Identities=18%  Similarity=0.288  Sum_probs=33.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..|.+++|.|+ |++|...+..+...|++|+++++++++.+
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~  204 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLE  204 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            35789999999 99999988888888999999988876654

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.17  E-value=0.084  Score=42.60  Aligned_cols=40  Identities=15%  Similarity=0.228  Sum_probs=33.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERV  117 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~  117 (173)
                      |...+.+.|.| +|.+|..++..++..| ..|+++|.+++..
T Consensus         3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~   43 (321)
T PTZ00082          3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIP   43 (321)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchh
Confidence            34557889999 5889999999999999 4899999988754

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=96.16  E-value=0.054  Score=47.42  Aligned_cols=89  Identities=17%  Similarity=0.300  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh----------------------hhHHHHHHHHHHHhCCceEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA----------------------ERVDSAVQSLREEFGEQHVW  134 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~----------------------~~~~~~~~~l~~~~~~~~~~  134 (173)
                      +...+++|.|+ ||+|-.+++.|+..| .+++++|.+.                      .+.+.+.+.+.+..+..++.
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~  414 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT  414 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence            35678888886 699999999999999 5788887521                      12334455666666665666


Q ss_pred             EEEeeC------CCHH---HHHHHHHHHHHhcCCccEEEEcc
Q 030706          135 GTKCDV------SEGN---EVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       135 ~~~~Dv------~~~~---~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      .+...|      -+++   .+.+-++.+.+.+...|+||.+.
T Consensus       415 ~~~~~Ipm~Gh~i~~~~~~~~~~d~~~l~~Li~~~DvV~d~t  456 (664)
T TIGR01381       415 GHRLTVPMPGHPIDEKDVPELEKDIARLEQLIKDHDVVFLLL  456 (664)
T ss_pred             EeeeeeccccccCCchhhhhccccHHHHHHHHhhCCEEEECC
Confidence            666553      1222   22222222333334568887764

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.14  E-value=0.044  Score=43.77  Aligned_cols=38  Identities=21%  Similarity=0.194  Sum_probs=32.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      ..+++++|.|+++++|.+++......|++|+++.++.+
T Consensus       145 ~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         145 QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            35789999999999999998888888999888877653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.14  E-value=0.057  Score=42.74  Aligned_cols=41  Identities=29%  Similarity=0.386  Sum_probs=34.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      .+.+++|.|+++++|.+++......|++|+++.+++++.+.
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  186 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADY  186 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence            35799999999999999988888889999999888765433

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.13  E-value=0.058  Score=43.09  Aligned_cols=57  Identities=19%  Similarity=0.380  Sum_probs=38.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh---------------------hhHHHHHHHHHHHhCCceEEEEEeeC
Q 030706           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSA---------------------ERVDSAVQSLREEFGEQHVWGTKCDV  140 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv  140 (173)
                      ++|.|+ ||+|-.+++.|+..| .+++++|.+.                     .+.+.+.+.+.+..+..++..+...|
T Consensus         2 VLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~I   80 (307)
T cd01486           2 CLLLGA-GTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLSI   80 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeeec
Confidence            566665 699999999999999 5788876421                     12334555666666655666665444

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.13  E-value=0.027  Score=41.38  Aligned_cols=41  Identities=32%  Similarity=0.246  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      ..+.|+++.|.|. |.||+++++.+...|.+|+..++.....
T Consensus        32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~   72 (178)
T PF02826_consen   32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE   72 (178)
T ss_dssp             S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred             cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh
Confidence            3488999999985 7999999999999999999999987653

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.11  E-value=0.046  Score=42.57  Aligned_cols=41  Identities=27%  Similarity=0.352  Sum_probs=34.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..+.+++|.|+++++|.+++......|++|++++++++..+
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  175 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE  175 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            35789999999999999999888888999999887766543

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.11  E-value=0.046  Score=43.21  Aligned_cols=40  Identities=23%  Similarity=0.174  Sum_probs=34.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      .|.+++|.|+++++|.+++......|++|+++..+.+..+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~  178 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVA  178 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence            5789999999999999998888888999998887765533

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.10  E-value=0.041  Score=43.02  Aligned_cols=41  Identities=29%  Similarity=0.436  Sum_probs=34.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..+..++|+|+++++|.+++..+...|+.|+.++++.+..+
T Consensus       138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (323)
T cd08241         138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA  178 (323)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence            35789999999999999999988889999999988765433

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.08  E-value=0.049  Score=44.34  Aligned_cols=38  Identities=24%  Similarity=0.248  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      .|++++|.|+ |++|..++..+...|++|++++.+.++.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~  220 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKE  220 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchh
Confidence            5788999765 8999998887777899988887765543

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.07  E-value=0.075  Score=42.29  Aligned_cols=77  Identities=19%  Similarity=0.164  Sum_probs=45.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      .+++++||+|++|...+......|++|+++++++++.+...    + .+...  +  .|..+.+..++ +.+.... .++
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~----~-~g~~~--~--i~~~~~~~~~~-v~~~~~~-~~~  213 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK----K-IGAEY--V--LNSSDPDFLED-LKELIAK-LNA  213 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-cCCcE--E--EECCCccHHHH-HHHHhCC-CCC
Confidence            44555699999999988766667999999988776543332    1 23211  1  23333322222 2222111 258


Q ss_pred             cEEEEccc
Q 030706          161 DIWVFMSD  168 (173)
Q Consensus       161 d~lVn~AG  168 (173)
                      |++|++.|
T Consensus       214 d~vid~~g  221 (324)
T cd08291         214 TIFFDAVG  221 (324)
T ss_pred             cEEEECCC
Confidence            99998876

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.06  E-value=0.075  Score=42.04  Aligned_cols=40  Identities=38%  Similarity=0.449  Sum_probs=33.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      .+..++|.|+++++|.+++..+...|++++++.++++..+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  179 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVD  179 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5789999999999999999988889999888887765433

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.04  E-value=0.042  Score=45.73  Aligned_cols=46  Identities=28%  Similarity=0.496  Sum_probs=40.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l  124 (173)
                      +.+++++|.|+ |-+|.-++++|.++| .+|+++.|+.++.+++..++
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~  222 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL  222 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            78999999997 579999999999999 68999999998888777665

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.98  E-value=0.087  Score=42.45  Aligned_cols=39  Identities=15%  Similarity=0.211  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVD  118 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~  118 (173)
                      ..+.+.|.|+ |.+|..++..++..| ..|+++|.+++..+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~   43 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQ   43 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccch
Confidence            4567899997 889999999999988 78999999876544

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.98  E-value=0.043  Score=43.80  Aligned_cols=43  Identities=16%  Similarity=0.221  Sum_probs=37.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..+.||++.|.|.++-+|+.++..|.++|++|.++++.....+
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~  197 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK  197 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            3578999999999999999999999999999999987655433

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.98  E-value=0.068  Score=43.49  Aligned_cols=80  Identities=19%  Similarity=0.175  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~  155 (173)
                      ..|.+++|.|+ |++|...+..+...|+ +|+++++++++.+.+ ++    .+...    ..|..+. +.+.+.+.++..
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~----~Ga~~----~i~~~~~~~~~~~~v~~~~~  255 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KK----FGVTE----FVNPKDHDKPVQEVIAEMTG  255 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH----cCCce----EEcccccchhHHHHHHHHhC
Confidence            35789999985 8999998887777898 799998887654432 22    23211    1233321 234444444332


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +.+|++|.+.|.
T Consensus       256 --~~~d~vid~~G~  267 (369)
T cd08301         256 --GGVDYSFECTGN  267 (369)
T ss_pred             --CCCCEEEECCCC
Confidence              368999998764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.98  E-value=0.072  Score=43.56  Aligned_cols=79  Identities=15%  Similarity=0.207  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHHh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQKN  156 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~  156 (173)
                      .+.+++|.| .+++|.+++..+...|+ +|++++++.++.+.. .++    +...    ..+..+. ++....+.+... 
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~l----Ga~~----~i~~~~~~~~~~~~v~~~~~-  258 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KEL----GATE----CINPQDYKKPIQEVLTEMTD-  258 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc----CCce----EecccccchhHHHHHHHHhC-
Confidence            467899996 58999999888888898 799998877654433 222    2111    1222221 122333333322 


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                       +.+|++|++.|.
T Consensus       259 -~~~d~vld~~g~  270 (373)
T cd08299         259 -GGVDFSFEVIGR  270 (373)
T ss_pred             -CCCeEEEECCCC
Confidence             469999998773

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PLN02827 Alcohol dehydrogenase-like

Probab=95.97  E-value=0.069  Score=43.81  Aligned_cols=80  Identities=15%  Similarity=0.154  Sum_probs=49.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~  155 (173)
                      ..|.+++|.|+ |++|..++......|+ .|+++++++++.+.. .+    .+...+    .|..+. +++.+.+.++..
T Consensus       192 ~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~----lGa~~~----i~~~~~~~~~~~~v~~~~~  261 (378)
T PLN02827        192 SKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KT----FGVTDF----INPNDLSEPIQQVIKRMTG  261 (378)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HH----cCCcEE----EcccccchHHHHHHHHHhC
Confidence            45889999985 8999998887777897 477777776554322 22    232111    233321 234444443322


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +.+|++|.++|.
T Consensus       262 --~g~d~vid~~G~  273 (378)
T PLN02827        262 --GGADYSFECVGD  273 (378)
T ss_pred             --CCCCEEEECCCC
Confidence              369999999884

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.97  E-value=0.069  Score=43.84  Aligned_cols=37  Identities=27%  Similarity=0.254  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~  116 (173)
                      .|.+++|.|+ |++|...+......|++|++++.+.+.
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~  214 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK  214 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence            5788999876 899999888777789999988876543

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.97  E-value=0.033  Score=39.51  Aligned_cols=43  Identities=23%  Similarity=0.333  Sum_probs=37.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      .++||.++|.|.+.-+|+.++..|.++|++|.+++++...+++
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            4889999999999999999999999999999999875544443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.96  E-value=0.048  Score=41.77  Aligned_cols=36  Identities=25%  Similarity=0.528  Sum_probs=32.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEecC
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRS  113 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~---~V~~~~r~  113 (173)
                      .+++++++|.|+ |+.|.+++..|.+.|.   +|++++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            377889999997 8999999999999995   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.94  E-value=0.061  Score=42.42  Aligned_cols=40  Identities=23%  Similarity=0.185  Sum_probs=34.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      ..+.+++|.|+++++|.+++..+...|++|+++.++.+..
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~  176 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQV  176 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHH
Confidence            3577999999999999999998888999999888876553

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.92  E-value=0.13  Score=37.61  Aligned_cols=79  Identities=14%  Similarity=0.072  Sum_probs=55.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc--
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL--  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--  157 (173)
                      ...++|-||-|.+|.++++.|-.+++-|.-+|..+...           .. .-+.+..|-+=.|+-+.+++++.+.+  
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~-----------Ad-~sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ-----------AD-SSILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc-----------cc-ceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            35689999999999999999999999998887654321           11 12233444443455566777776665  


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      .++|.+++-||-.
T Consensus        71 ekvDav~CVAGGW   83 (236)
T KOG4022|consen   71 EKVDAVFCVAGGW   83 (236)
T ss_pred             cccceEEEeeccc
Confidence            3799999988754

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.91  E-value=0.12  Score=41.49  Aligned_cols=78  Identities=12%  Similarity=0.141  Sum_probs=52.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCc-eEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQ-HVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+.|+|+ |.+|..++..|+..|  ..++++|.+.+.++....++....+-. ......  -.|.++           +
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~~-----------~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYSV-----------T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHHH-----------h
Confidence            36888996 999999999999887  479999998877766666666543110 011111  122221           2


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      ..-|++|.+||....
T Consensus        70 ~~adivvitaG~~~k   84 (312)
T cd05293          70 ANSKVVIVTAGARQN   84 (312)
T ss_pred             CCCCEEEECCCCCCC
Confidence            368999999998653

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.89  E-value=0.046  Score=44.57  Aligned_cols=79  Identities=20%  Similarity=0.244  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ..+.+++|.|+ |++|...+..+...|+ +|+++++++++.+-. .+    .+...    .+|..+.+..++ +.+..  
T Consensus       190 ~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~----~Ga~~----~i~~~~~~~~~~-i~~~~--  256 (371)
T cd08281         190 RPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RE----LGATA----TVNAGDPNAVEQ-VRELT--  256 (371)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HH----cCCce----EeCCCchhHHHH-HHHHh--
Confidence            35789999985 8999988877777898 688888877654322 22    22211    224333332222 22221  


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      .+.+|++|.+.|.
T Consensus       257 ~~g~d~vid~~G~  269 (371)
T cd08281         257 GGGVDYAFEMAGS  269 (371)
T ss_pred             CCCCCEEEECCCC
Confidence            1368999988763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.87  E-value=0.19  Score=37.82  Aligned_cols=36  Identities=25%  Similarity=0.332  Sum_probs=32.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      +++|.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            78999999998 7899999999999999999998653

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.87  E-value=0.11  Score=41.66  Aligned_cols=35  Identities=23%  Similarity=0.284  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      .|.+++|+|+++++|.+++......|++|+++.++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            38899999999999999998888889998887754

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK07877 hypothetical protein; Provisional

Probab=95.86  E-value=0.093  Score=46.82  Aligned_cols=80  Identities=15%  Similarity=0.132  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecCh------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSA------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +..++|+|.|. | +|..++..|+..|  .+++++|.+.                  .+.+...+.+.+..+..++..+.
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~  182 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT  182 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence            57789999999 4 9999999999998  4888887631                  23344455566655665777777


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..++ .+.++++++       +.|+||.|.
T Consensus       183 ~~i~-~~n~~~~l~-------~~DlVvD~~  204 (722)
T PRK07877        183 DGLT-EDNVDAFLD-------GLDVVVEEC  204 (722)
T ss_pred             ccCC-HHHHHHHhc-------CCCEEEECC
Confidence            7776 455555543       578888764

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=95.85  E-value=0.094  Score=41.75  Aligned_cols=41  Identities=24%  Similarity=0.322  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      .+.+++|.|+++.+|.+++..+...|++|+.++++.+..+.
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~  202 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKI  202 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            46789999999999999998888889999998887766543

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.82  E-value=0.094  Score=42.53  Aligned_cols=38  Identities=24%  Similarity=0.218  Sum_probs=34.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      .+.||++.|.|. |.||+.+++.|...|.+|+..+++..
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            488999999997 89999999999999999999998653

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.80  E-value=0.037  Score=43.92  Aligned_cols=41  Identities=20%  Similarity=0.302  Sum_probs=36.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      .+.||+++|.|.+.-+|+.++..|..+|++|+++.+....+
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l  195 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDM  195 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            48899999999999999999999999999999998865433

>PRK07411 hypothetical protein; Validated

Probab=95.79  E-value=0.15  Score=42.34  Aligned_cols=82  Identities=23%  Similarity=0.201  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +...+++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+...+.+.+..+..++..+.
T Consensus        36 L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~  114 (390)
T PRK07411         36 LKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE  114 (390)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence            56678888876 699999999999999 5788887531                   23344556666666655666666


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMSD  168 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG  168 (173)
                      ..++.. ...+++       ...|+||.+..
T Consensus       115 ~~~~~~-~~~~~~-------~~~D~Vvd~~d  137 (390)
T PRK07411        115 TRLSSE-NALDIL-------APYDVVVDGTD  137 (390)
T ss_pred             cccCHH-hHHHHH-------hCCCEEEECCC
Confidence            556543 222222       35788887753

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.79  E-value=0.044  Score=44.46  Aligned_cols=80  Identities=19%  Similarity=0.191  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ..+.+++|.|+ |++|...+......|++ |+++++++++.+.. ++    .+...    ..|..+.+..+.+ .+... 
T Consensus       175 ~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~----~Ga~~----~i~~~~~~~~~~i-~~~~~-  242 (358)
T TIGR03451       175 KRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-RE----FGATH----TVNSSGTDPVEAI-RALTG-  242 (358)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH----cCCce----EEcCCCcCHHHHH-HHHhC-
Confidence            35789999975 99999988877778984 88888877654332 22    22211    1243333222222 22211 


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      ...+|++|.+.|.
T Consensus       243 ~~g~d~vid~~g~  255 (358)
T TIGR03451       243 GFGADVVIDAVGR  255 (358)
T ss_pred             CCCCCEEEECCCC
Confidence            1258999998874

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.79  E-value=0.091  Score=42.27  Aligned_cols=80  Identities=23%  Similarity=0.265  Sum_probs=52.8

Q ss_pred             CCCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC-CHHHHHHHHH
Q 030706           74 REPMLPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS-EGNEVADLVA  151 (173)
Q Consensus        74 ~~~~~~~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~v~~~~~  151 (173)
                      ...+..|+.+-|+|+.| ||. ++-++++ .|++|+++++...+-++..+.|    +..  .  -+|.+ |++.++++.+
T Consensus       176 ~~g~~pG~~vgI~GlGG-LGh-~aVq~AKAMG~rV~vis~~~~kkeea~~~L----GAd--~--fv~~~~d~d~~~~~~~  245 (360)
T KOG0023|consen  176 RSGLGPGKWVGIVGLGG-LGH-MAVQYAKAMGMRVTVISTSSKKKEEAIKSL----GAD--V--FVDSTEDPDIMKAIMK  245 (360)
T ss_pred             HcCCCCCcEEEEecCcc-cch-HHHHHHHHhCcEEEEEeCCchhHHHHHHhc----Ccc--e--eEEecCCHHHHHHHHH
Confidence            33445899999999887 995 4555554 5999999999876666665554    221  1  23666 7777666654


Q ss_pred             HHHHhcCCccEEEEc
Q 030706          152 FAQKNLKYVDIWVFM  166 (173)
Q Consensus       152 ~~~~~~g~id~lVn~  166 (173)
                      ..   .+.+|.++|-
T Consensus       246 ~~---dg~~~~v~~~  257 (360)
T KOG0023|consen  246 TT---DGGIDTVSNL  257 (360)
T ss_pred             hh---cCcceeeeec
Confidence            33   2566777654

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.76  E-value=0.094  Score=41.04  Aligned_cols=38  Identities=26%  Similarity=0.343  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERV  117 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~  117 (173)
                      .+++++|.|+ |+||...+..+...|++ |+++++++++.
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            6789999986 89999988877778986 88887776554

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.76  E-value=0.091  Score=42.73  Aligned_cols=80  Identities=15%  Similarity=0.182  Sum_probs=48.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~  155 (173)
                      ..|.+++|.| .|++|...+......|+ +|+.+++++++.+.. .++    +...+    .|..+. +.+.+.+.+...
T Consensus       183 ~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~----ga~~~----i~~~~~~~~~~~~~~~~~~  252 (365)
T cd08277         183 EPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEF----GATDF----INPKDSDKPVSEVIREMTG  252 (365)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc----CCCcE----eccccccchHHHHHHHHhC
Confidence            4578999997 58999998887777898 798898876654332 222    22111    122221 122233333322


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +.+|++|.+.|.
T Consensus       253 --~g~d~vid~~g~  264 (365)
T cd08277         253 --GGVDYSFECTGN  264 (365)
T ss_pred             --CCCCEEEECCCC
Confidence              468999998773

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.75  E-value=0.042  Score=37.62  Aligned_cols=66  Identities=24%  Similarity=0.271  Sum_probs=42.9

Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC--CccEEEEccc
Q 030706           91 GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK--YVDIWVFMSD  168 (173)
Q Consensus        91 gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id~lVn~AG  168 (173)
                      |||...+..+...|++|+++++++++.+..    ++ .+.   .. .+|..+.+    +.+++.+..+  ++|++|.++|
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~----~~-~Ga---~~-~~~~~~~~----~~~~i~~~~~~~~~d~vid~~g   67 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELA----KE-LGA---DH-VIDYSDDD----FVEQIRELTGGRGVDVVIDCVG   67 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHH----HH-TTE---SE-EEETTTSS----HHHHHHHHTTTSSEEEEEESSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHH----Hh-hcc---cc-cccccccc----cccccccccccccceEEEEecC
Confidence            689888888888899999999988764332    22 232   11 24555544    3334444333  6999999998


Q ss_pred             C
Q 030706          169 L  169 (173)
Q Consensus       169 ~  169 (173)
                      .
T Consensus        68 ~   68 (130)
T PF00107_consen   68 S   68 (130)
T ss_dssp             S
T ss_pred             c
Confidence            3

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.75  E-value=0.07  Score=41.11  Aligned_cols=41  Identities=27%  Similarity=0.364  Sum_probs=35.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~  121 (173)
                      +.|+.+|=.|++||   .+++.|++.|++|+.+|-+++..+...
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak   98 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAK   98 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHH
Confidence            78999999999998   588999999999999999887765543

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.74  E-value=0.13  Score=38.87  Aligned_cols=36  Identities=25%  Similarity=0.372  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      ++||.++|.|| |.+|..-++.|++.|++|++++...
T Consensus         7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~   42 (205)
T TIGR01470         7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL   42 (205)
T ss_pred             cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            67899999986 5789999999999999999998754

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.72  E-value=0.096  Score=41.87  Aligned_cols=40  Identities=25%  Similarity=0.295  Sum_probs=34.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      .+.+++|.|+++++|.+++..+...|.+|+++.++++..+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~  204 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE  204 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            5789999999999999999988889999999988876543

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.71  E-value=0.17  Score=42.01  Aligned_cols=81  Identities=20%  Similarity=0.176  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +...+++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+...+.+.+..+..++..+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            56678888875 699999999999999 4788887531                   12333455555555554565555


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..++.. ...+++       ...|+||.+.
T Consensus       119 ~~i~~~-~~~~~~-------~~~D~Vvd~~  140 (392)
T PRK07878        119 FRLDPS-NAVELF-------SQYDLILDGT  140 (392)
T ss_pred             ccCChh-HHHHHH-------hcCCEEEECC
Confidence            555432 222222       3578888764

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.70  E-value=0.2  Score=40.58  Aligned_cols=88  Identities=16%  Similarity=0.169  Sum_probs=53.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH---HHHHHHhCCceEEEEEeeCCCHHHHHHHH-HH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV---QSLREEFGEQHVWGTKCDVSEGNEVADLV-AF  152 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~-~~  152 (173)
                      .+.|+++.|.|. |.||+++++.|...|.+|++.+++........   ..+........+..+.+-.+.  +...++ ++
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~--~t~~li~~~  219 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK--ESYHLFDKA  219 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH--HHHHHHhHH
Confidence            478999999975 68999999999999999999998764332211   122222233346665555443  233444 33


Q ss_pred             HHHhcCCccEEEEccc
Q 030706          153 AQKNLKYVDIWVFMSD  168 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG  168 (173)
                      ..+.+. -+.++.|+|
T Consensus       220 ~l~~mk-~gavlIN~a  234 (330)
T PRK12480        220 MFDHVK-KGAILVNAA  234 (330)
T ss_pred             HHhcCC-CCcEEEEcC
Confidence            444433 344554544

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.70  E-value=0.055  Score=43.59  Aligned_cols=78  Identities=23%  Similarity=0.236  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .+++++|+|+ +++|..++..+...|+ +|+++++++++.+.. .+    .+...    ..|..+.+..+.+. +.. ..
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~----~ga~~----~i~~~~~~~~~~l~-~~~-~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EE----LGATI----VLDPTEVDVVAEVR-KLT-GG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH----hCCCE----EECCCccCHHHHHH-HHh-CC
Confidence            5789999985 8999999888888898 788888877654322 22    22211    22444433222222 111 11


Q ss_pred             CCccEEEEccc
Q 030706          158 KYVDIWVFMSD  168 (173)
Q Consensus       158 g~id~lVn~AG  168 (173)
                      +.+|++|++.|
T Consensus       240 ~~~d~vid~~g  250 (351)
T cd08233         240 GGVDVSFDCAG  250 (351)
T ss_pred             CCCCEEEECCC
Confidence            24999999886

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.69  E-value=0.037  Score=43.63  Aligned_cols=43  Identities=23%  Similarity=0.272  Sum_probs=35.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS  123 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~  123 (173)
                      ++.++|.|+ ||-+++++..|.+.|+ +|++++|+.++.++..+.
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            467888885 8999999999999996 699999998877665543

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.68  E-value=0.049  Score=43.70  Aligned_cols=78  Identities=19%  Similarity=0.261  Sum_probs=50.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-C-EEEEEecChhhHHHHHHHHHHHhCC-ceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG-D-NVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G-~-~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+.|+|+ |++|.+++..|+.++ . .++++|..++..+-...++...... ..-..+..| .+.+           .+.
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~-----------~~~   68 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYE-----------DLK   68 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChh-----------hhc
Confidence            5788999 999999999998876 4 8999999866655555555432111 001111222 1122           123


Q ss_pred             CccEEEEcccCCCC
Q 030706          159 YVDIWVFMSDLHSS  172 (173)
Q Consensus       159 ~id~lVn~AG~~~~  172 (173)
                      .-|++|..||+..+
T Consensus        69 ~aDiVvitAG~prK   82 (313)
T COG0039          69 GADIVVITAGVPRK   82 (313)
T ss_pred             CCCEEEEeCCCCCC
Confidence            68999999998765

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=95.66  E-value=0.017  Score=42.61  Aligned_cols=81  Identities=17%  Similarity=0.077  Sum_probs=55.1

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .+.++.+..+|.|++|-.|..+.+++++.+  .+|+++.|.+......        . ..+....+|....+   +..  
T Consensus        13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at--------~-k~v~q~~vDf~Kl~---~~a--   78 (238)
T KOG4039|consen   13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT--------D-KVVAQVEVDFSKLS---QLA--   78 (238)
T ss_pred             HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc--------c-ceeeeEEechHHHH---HHH--
Confidence            355778899999999999999999999998  5899999875322111        1 13555556654333   322  


Q ss_pred             HHHhcCCccEEEEcccCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~  171 (173)
                        ..+-+.|+++.+-|.+.
T Consensus        79 --~~~qg~dV~FcaLgTTR   95 (238)
T KOG4039|consen   79 --TNEQGPDVLFCALGTTR   95 (238)
T ss_pred             --hhhcCCceEEEeecccc
Confidence              23347899998876553

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.66  E-value=0.17  Score=40.28  Aligned_cols=75  Identities=15%  Similarity=0.271  Sum_probs=49.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      ++|.| .||+|-++++.|+..| .++.++|.+.                   .+.+.+.+.+.+..+..++..+..++.+
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            56776 5799999999999999 5788876531                   2334445555555565567777777764


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          143 GNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       143 ~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      .+  ..       -+...|++|.+.
T Consensus        81 ~~--~~-------f~~~fdvVi~al   96 (291)
T cd01488          81 KD--EE-------FYRQFNIIICGL   96 (291)
T ss_pred             hh--HH-------HhcCCCEEEECC
Confidence            32  11       234688888753

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=95.63  E-value=0.053  Score=43.49  Aligned_cols=33  Identities=27%  Similarity=0.305  Sum_probs=29.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEecCh
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRSA  114 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~  114 (173)
                      ++.|+|++|.+|..++..|+..|.  .|++++++.
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            588999999999999999999985  599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.60  E-value=0.15  Score=41.18  Aligned_cols=38  Identities=26%  Similarity=0.343  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERV  117 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~  117 (173)
                      .+.+++|+| +|++|.+++..+...|+ +|++++++++..
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~  215 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERL  215 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            678999997 59999999887778898 899888876553

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK14852 hypothetical protein; Provisional

Probab=95.58  E-value=0.15  Score=46.70  Aligned_cols=81  Identities=17%  Similarity=0.145  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +...+|+|.| .||+|..+++.|+..| .++.++|-+.                   .+.+...+.+.+..+..++..+.
T Consensus       330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~  408 (989)
T PRK14852        330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP  408 (989)
T ss_pred             HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence            5667889988 5799999999999999 5788876531                   23344455566555655677666


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..++ .+.++++++       .+|+||.+.
T Consensus       409 ~~I~-~en~~~fl~-------~~DiVVDa~  430 (989)
T PRK14852        409 EGVA-AETIDAFLK-------DVDLLVDGI  430 (989)
T ss_pred             cCCC-HHHHHHHhh-------CCCEEEECC
Confidence            6663 344444442       578888754

>smart00829 PKS_ER Enoylreductase

Probab=95.57  E-value=0.093  Score=40.19  Aligned_cols=41  Identities=29%  Similarity=0.370  Sum_probs=34.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..+.+++|.|+++++|..++......|++|+.++++++..+
T Consensus       103 ~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  143 (288)
T smart00829      103 RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRD  143 (288)
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            35778999999999999998877778999999988776544

Enoylreductase in Polyketide synthases.

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.55  E-value=0.04  Score=39.65  Aligned_cols=40  Identities=30%  Similarity=0.432  Sum_probs=32.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l  124 (173)
                      ++++|+.+-+|+++|..|.++|.+|+++  +.+..+.+..++
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~   40 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA   40 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence            5789999999999999999999999998  444555555444

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.54  E-value=0.14  Score=42.20  Aligned_cols=39  Identities=31%  Similarity=0.379  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~  116 (173)
                      ..+.+++|+|+++++|.+++..+...|++++++.++.+.
T Consensus       188 ~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~  226 (398)
T TIGR01751       188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEK  226 (398)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence            356899999999999999988888889998888776654

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PLN02602 lactate dehydrogenase

Probab=95.53  E-value=0.17  Score=41.30  Aligned_cols=77  Identities=12%  Similarity=0.191  Sum_probs=52.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCC-ceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+.|+|+ |.+|..++..|+..|  ..++++|.+++.++....++.....- .... +.. -.|.++           +
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~-~~dy~~-----------~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILA-STDYAV-----------T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEe-CCCHHH-----------h
Confidence            58899996 899999999999887  47999999887776666666653211 0111 111 112221           2


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      ..-|++|..||...
T Consensus       104 ~daDiVVitAG~~~  117 (350)
T PLN02602        104 AGSDLCIVTAGARQ  117 (350)
T ss_pred             CCCCEEEECCCCCC
Confidence            36899999999854

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.52  E-value=0.059  Score=39.13  Aligned_cols=42  Identities=21%  Similarity=0.321  Sum_probs=31.5

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      ..++.||+++|.|- |.+|+.+|+.|...|++|++++.++-..
T Consensus        18 ~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~a   59 (162)
T PF00670_consen   18 NLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRA   59 (162)
T ss_dssp             -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH
T ss_pred             ceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHH
Confidence            35689999999984 6899999999999999999999987543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.50  E-value=0.06  Score=43.36  Aligned_cols=36  Identities=22%  Similarity=0.153  Sum_probs=32.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      .+.||++.|.|- |.||+++++.+...|.+|+..++.
T Consensus       145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            488999999986 799999999999999999988875

>PLN03139 formate dehydrogenase; Provisional

Probab=95.49  E-value=0.17  Score=41.90  Aligned_cols=88  Identities=14%  Similarity=0.005  Sum_probs=53.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-------HHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-------VQSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      ..+.||++.|.| .|.||+.+++.|...|.+|+..++.....+..       ...+.+......+..+.+  -..++.+.
T Consensus       195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~l--Plt~~T~~  271 (386)
T PLN03139        195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINT--PLTEKTRG  271 (386)
T ss_pred             cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeC--CCCHHHHH
Confidence            458999999999 57899999999999999999988764211110       112222222223444443  44445666


Q ss_pred             HHHH-HHHhcCCccEEEEc
Q 030706          149 LVAF-AQKNLKYVDIWVFM  166 (173)
Q Consensus       149 ~~~~-~~~~~g~id~lVn~  166 (173)
                      ++++ ..+.+.+=-+|||.
T Consensus       272 li~~~~l~~mk~ga~lIN~  290 (386)
T PLN03139        272 MFNKERIAKMKKGVLIVNN  290 (386)
T ss_pred             HhCHHHHhhCCCCeEEEEC
Confidence            6643 44444433445554

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.49  E-value=0.092  Score=41.90  Aligned_cols=38  Identities=26%  Similarity=0.399  Sum_probs=34.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cCh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSA  114 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~  114 (173)
                      .+.||+++|.|.++-+|+.++..|.+.|++|++++ |+.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            47899999999999999999999999999999995 654

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.48  E-value=0.16  Score=41.62  Aligned_cols=41  Identities=32%  Similarity=0.401  Sum_probs=34.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..+.+++|+|++|++|.+++..+...|++++++++++++.+
T Consensus       192 ~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~  232 (393)
T cd08246         192 KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAE  232 (393)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence            34779999999999999998888788999888887766543

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.47  E-value=0.14  Score=40.86  Aligned_cols=39  Identities=26%  Similarity=0.359  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      .+.+++|.| ++++|.+++..+...|++|+++++++++.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~  201 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKAD  201 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence            578999999 799999988888888999999988766543

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.43  E-value=0.085  Score=41.73  Aligned_cols=42  Identities=24%  Similarity=0.359  Sum_probs=34.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~  122 (173)
                      -+.+.|.|+ |.+|..++..|+..|++|++.+++++..+...+
T Consensus         4 ~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (292)
T PRK07530          4 IKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLA   45 (292)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            356777775 789999999999999999999999877665443

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.42  E-value=0.036  Score=40.20  Aligned_cols=43  Identities=26%  Similarity=0.438  Sum_probs=34.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      .+.||+++|.|.+.-+|+-++..|.++|++|.++......+++
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            3889999999999999999999999999999999876555443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.42  E-value=0.18  Score=40.13  Aligned_cols=43  Identities=14%  Similarity=0.171  Sum_probs=33.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l  124 (173)
                      +.+.|.|+ |.+|..++..++..|. +|+++|++++..+....++
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl   46 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDI   46 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHH
Confidence            46888898 8899999999998874 9999999877655443333

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.42  E-value=0.21  Score=40.02  Aligned_cols=74  Identities=11%  Similarity=0.162  Sum_probs=51.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhC---CceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           83 VLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFG---EQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.|.|+ |.+|..+|..|+..|  .+++++|.+++..+....+|.....   ..++....   .|.+           .+
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~-----------~~   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYD-----------DC   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHH-----------Hh
Confidence            567787 999999999999887  3799999988777666666665322   11233322   2322           22


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      ..-|++|..||...
T Consensus        67 ~~aDivvitaG~~~   80 (307)
T cd05290          67 ADADIIVITAGPSI   80 (307)
T ss_pred             CCCCEEEECCCCCC
Confidence            37899999999854

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.40  E-value=0.056  Score=43.09  Aligned_cols=78  Identities=18%  Similarity=0.225  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|.+++|++|+|..|. ++-++++ .|++|+.+.-.+++.+-..+++    +.+.    -.|...+ ++.+.   +.+..
T Consensus       150 ~GetvvVSaAaGaVGs-vvgQiAKlkG~rVVGiaGg~eK~~~l~~~l----GfD~----~idyk~~-d~~~~---L~~a~  216 (340)
T COG2130         150 AGETVVVSAAAGAVGS-VVGQIAKLKGCRVVGIAGGAEKCDFLTEEL----GFDA----GIDYKAE-DFAQA---LKEAC  216 (340)
T ss_pred             CCCEEEEEecccccch-HHHHHHHhhCCeEEEecCCHHHHHHHHHhc----CCce----eeecCcc-cHHHH---HHHHC
Confidence            5899999999999995 6667776 5899999888776654433332    3211    2355444 23333   33333


Q ss_pred             -CCccEEEEcccC
Q 030706          158 -KYVDIWVFMSDL  169 (173)
Q Consensus       158 -g~id~lVn~AG~  169 (173)
                       ..||+.+-|.|-
T Consensus       217 P~GIDvyfeNVGg  229 (340)
T COG2130         217 PKGIDVYFENVGG  229 (340)
T ss_pred             CCCeEEEEEcCCc
Confidence             479999998873

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.40  E-value=0.024  Score=37.86  Aligned_cols=37  Identities=27%  Similarity=0.317  Sum_probs=31.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+++|.++|.|| |.+|..-++.|++.|++|++++...
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            378999999998 7899999999999999999999874

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.40  E-value=0.13  Score=41.18  Aligned_cols=36  Identities=31%  Similarity=0.388  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      ..+.+++|.|+++++|.+++..+...|++|+.+..+
T Consensus       176 ~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~  211 (350)
T cd08274         176 GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGA  211 (350)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCc
Confidence            357899999999999999988888889998888754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.38  E-value=0.068  Score=34.74  Aligned_cols=40  Identities=35%  Similarity=0.497  Sum_probs=32.0

Q ss_pred             EEEcCCchHHHHHHHHHHHcC---CEEEEE-ecChhhHHHHHHHH
Q 030706           84 LITGSTKGIGYALAKEFLKAG---DNVIIC-SRSAERVDSAVQSL  124 (173)
Q Consensus        84 lItGa~~gIG~aia~~l~~~G---~~V~~~-~r~~~~~~~~~~~l  124 (173)
                      .|. |.|.+|.++++.|.+.|   .+|++. +|++++.++..+++
T Consensus         3 ~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    3 GII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            344 67899999999999999   899955 89988877665543

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=95.36  E-value=0.068  Score=43.17  Aligned_cols=77  Identities=13%  Similarity=0.094  Sum_probs=48.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-------EEEEEecChhh--HHHHHHHHHHHh-CC-ceEEEEEeeCCCHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSAER--VDSAVQSLREEF-GE-QHVWGTKCDVSEGNEVADL  149 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~-------~V~~~~r~~~~--~~~~~~~l~~~~-~~-~~~~~~~~Dv~~~~~v~~~  149 (173)
                      +.+.|+|++|.+|..++..|+..|.       .++++|.++..  ++....++.... .. .++..   .-.+       
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~-------   72 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDP-------   72 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCc-------
Confidence            4789999999999999999998873       69999985432  333333443321 00 01111   1111       


Q ss_pred             HHHHHHhcCCccEEEEcccCCC
Q 030706          150 VAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       150 ~~~~~~~~g~id~lVn~AG~~~  171 (173)
                          .+.+..-|++|..||...
T Consensus        73 ----~~~~~daDivvitaG~~~   90 (322)
T cd01338          73 ----NVAFKDADWALLVGAKPR   90 (322)
T ss_pred             ----HHHhCCCCEEEEeCCCCC
Confidence                122347899999999854

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.35  E-value=0.17  Score=40.64  Aligned_cols=89  Identities=15%  Similarity=0.088  Sum_probs=52.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH---HH--HHHHHHHhCCceEEEEEeeCCCHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD---SA--VQSLREEFGEQHVWGTKCDVSEGNEVADLV  150 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~--~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~  150 (173)
                      ..+.||++.|.| .|.||+.+++.|...|.+|+..++..+...   ..  ..++.+......+..+.+-.+  ++.+.++
T Consensus       132 ~~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt--~~T~~li  208 (312)
T PRK15469        132 YHREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNT--PETVGII  208 (312)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCC--HHHHHHh
Confidence            347899999997 478999999999999999999987643211   00  112322223234555544443  3456665


Q ss_pred             HH-HHHhcCCccEEEEccc
Q 030706          151 AF-AQKNLKYVDIWVFMSD  168 (173)
Q Consensus       151 ~~-~~~~~g~id~lVn~AG  168 (173)
                      .+ ..+.+.+ +.++.|.|
T Consensus       209 ~~~~l~~mk~-ga~lIN~a  226 (312)
T PRK15469        209 NQQLLEQLPD-GAYLLNLA  226 (312)
T ss_pred             HHHHHhcCCC-CcEEEECC
Confidence            43 4444433 44444444

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.32  E-value=0.17  Score=42.97  Aligned_cols=39  Identities=21%  Similarity=0.301  Sum_probs=33.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      ..+.+|.++|.| .||.|+++++.|.+.|+.|.+.+++..
T Consensus        11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~   49 (473)
T PRK00141         11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNET   49 (473)
T ss_pred             ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChH
Confidence            346678899998 678999999999999999999997654

>PRK14968 putative methyltransferase; Provisional

Probab=95.28  E-value=0.16  Score=36.95  Aligned_cols=78  Identities=21%  Similarity=0.146  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCce-EEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH-VWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .++.+|-.|++.|.   ++..++..+.+|+.++.+++..+...+.+.......+ +.++.+|+.+.         ..+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--
Confidence            56778888866554   3444455588999999998777666555544322212 77777776432         111  


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      +.+|.++.|..+.
T Consensus        89 ~~~d~vi~n~p~~  101 (188)
T PRK14968         89 DKFDVILFNPPYL  101 (188)
T ss_pred             cCceEEEECCCcC
Confidence            2689999886543

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.27  E-value=0.19  Score=41.37  Aligned_cols=71  Identities=21%  Similarity=0.242  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      .|+++|+|++ .+|+.+++.+.+.|++|++++.++......   +    ..   .++..|..|.+.+.+++++     ..
T Consensus        12 ~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~----ad---~~~~~~~~d~~~l~~~~~~-----~~   75 (395)
T PRK09288         12 ATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---V----AH---RSHVIDMLDGDALRAVIER-----EK   75 (395)
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---h----hh---heEECCCCCHHHHHHHHHH-----hC
Confidence            4689999875 689999999999999999999876432111   1    11   1345677787776666543     25


Q ss_pred             ccEEEEc
Q 030706          160 VDIWVFM  166 (173)
Q Consensus       160 id~lVn~  166 (173)
                      +|+++..
T Consensus        76 id~vi~~   82 (395)
T PRK09288         76 PDYIVPE   82 (395)
T ss_pred             CCEEEEe
Confidence            8887753

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.26  E-value=0.14  Score=40.70  Aligned_cols=87  Identities=18%  Similarity=0.244  Sum_probs=53.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEe--cChhh---------HHHHHHHHHHHhCCceEEEEEeeCCCHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLK-AGDNVIICS--RSAER---------VDSAVQSLREEFGEQHVWGTKCDVSEGNEVA  147 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~--r~~~~---------~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~  147 (173)
                      .|.+||.|+++|.|++.--..+= .|+.-+.+.  |....         -.....+..+..+- -..-+..|.-+.+.-+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGl-yAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGL-YAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCc-eeeecccchhhHHHHH
Confidence            48899999999999875333322 345444332  21110         01122223222221 3445677887777778


Q ss_pred             HHHHHHHHhcCCccEEEEcc
Q 030706          148 DLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       148 ~~~~~~~~~~g~id~lVn~A  167 (173)
                      .+++.+++.+|.+|.+|+.-
T Consensus       120 kvIe~Ik~~~g~vDlvvYSl  139 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSL  139 (398)
T ss_pred             HHHHHHHHhhccccEEEEec
Confidence            89999999999999999863

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.20  E-value=0.62  Score=37.04  Aligned_cols=85  Identities=15%  Similarity=0.182  Sum_probs=54.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH----------HHHHhCCceEEEEEeeCCCHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS----------LREEFGEQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----------l~~~~~~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      ++-|.| .|-+|.++++.|++.|++|++.+|+++..+...+.          +.......++.++  =+.+. .++.+++
T Consensus         2 ~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~--~vp~~-~~~~v~~   77 (298)
T TIGR00872         2 QLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWV--MVPHG-IVDAVLE   77 (298)
T ss_pred             EEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEE--EcCch-HHHHHHH
Confidence            355666 57899999999999999999999998776554331          1111111123333  24444 7788888


Q ss_pred             HHHHhcCCccEEEEcccCC
Q 030706          152 FAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       152 ~~~~~~g~id~lVn~AG~~  170 (173)
                      ++.....+=+++|++....
T Consensus        78 ~l~~~l~~g~ivid~st~~   96 (298)
T TIGR00872        78 ELAPTLEKGDIVIDGGNSY   96 (298)
T ss_pred             HHHhhCCCCCEEEECCCCC
Confidence            8776654447788765543

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.18  E-value=0.11  Score=41.81  Aligned_cols=66  Identities=21%  Similarity=0.170  Sum_probs=44.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH--HHHHHHHHhCCceEEEEEeeCCCH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS--AVQSLREEFGEQHVWGTKCDVSEG  143 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~~~  143 (173)
                      .+.||++.|.|- |.||+++|+.+...|.+|+..++.....+.  ....+.+......+..+.+-++++
T Consensus       142 ~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~  209 (311)
T PRK08410        142 EIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEK  209 (311)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCch
Confidence            588999999985 799999999999999999999875321110  011222222223566666666654

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=95.18  E-value=0.21  Score=38.12  Aligned_cols=40  Identities=25%  Similarity=0.257  Sum_probs=33.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      ..|.+++|.|+++++|..++......|.+|+.+.++.+..
T Consensus       107 ~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  146 (293)
T cd05195         107 QKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKR  146 (293)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            3578999999999999998887777899999988876543

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>PLN02494 adenosylhomocysteinase

Probab=95.17  E-value=0.18  Score=42.81  Aligned_cols=40  Identities=23%  Similarity=0.245  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~  116 (173)
                      .++.||+++|.|.+ .||+.+++.+...|++|+++++++..
T Consensus       250 i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        250 VMIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             CccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            34789999999864 89999999999999999999987654

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.16  E-value=0.14  Score=40.65  Aligned_cols=40  Identities=20%  Similarity=0.249  Sum_probs=33.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      ..+.+++|.|+.+.+|.+++......|++|+.+.++.++.
T Consensus       139 ~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~  178 (327)
T PRK10754        139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKA  178 (327)
T ss_pred             CCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            3578999999999999999887778899999888776553

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.14  E-value=0.095  Score=41.56  Aligned_cols=41  Identities=27%  Similarity=0.438  Sum_probs=35.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      .+.||+++|.|.+.-+|+-++..|..+|++|.++......+
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l  194 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL  194 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence            47899999999999999999999999999999887654433

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.13  E-value=0.68  Score=36.54  Aligned_cols=41  Identities=27%  Similarity=0.284  Sum_probs=33.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~  122 (173)
                      +++.|.|+ |-+|.+++..|+..|++|++.+++++..++..+
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~   44 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKE   44 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence            45677775 789999999999999999999999876655543

>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli

Probab=95.13  E-value=0.39  Score=35.09  Aligned_cols=73  Identities=15%  Similarity=0.166  Sum_probs=45.9

Q ss_pred             HHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706           94 YALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSD  168 (173)
Q Consensus        94 ~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG  168 (173)
                      ..+.....+.+.+|++++-+++..++..+.+.+.+++-++.....-.-++++.+++++.+.+.  +.|+|+.+-|
T Consensus        38 ~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~--~pdiv~vglG  110 (172)
T PF03808_consen   38 PDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINAS--GPDIVFVGLG  110 (172)
T ss_pred             HHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHc--CCCEEEEECC
Confidence            344445555677888888777777777777777776644443222112666667777776654  5677776544

Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process

>PLN02928 oxidoreductase family protein

Probab=95.13  E-value=0.13  Score=41.87  Aligned_cols=36  Identities=33%  Similarity=0.371  Sum_probs=33.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      .+.||++.|.|. |.||+.+++.|...|.+|+..+|+
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~  191 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS  191 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            488999999986 799999999999999999999886

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=95.11  E-value=0.17  Score=40.47  Aligned_cols=41  Identities=20%  Similarity=0.271  Sum_probs=33.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      ..+++++|.| .+++|..++..+...|.+|+++.++.+..+.
T Consensus       164 ~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~  204 (345)
T cd08260         164 KPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLEL  204 (345)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            3578999999 6899999988888889999999887665433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	173
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		5e-08
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-07
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-07
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-07
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-07
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		5e-07
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-06
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-06
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-06
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-06
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-06
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-06
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-06
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-06
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		3e-06
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-06
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		3e-06
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-06
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		7e-06
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		3e-05
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		3e-05
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		3e-05
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		5e-05
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		5e-05
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		5e-05
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		5e-05
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		6e-05
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		7e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-04
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		3e-04
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		3e-04
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		3e-04
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		3e-04
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		4e-04
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		4e-04
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		4e-04
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		4e-04
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		4e-04
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		4e-04
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		4e-04
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		4e-04
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		5e-04
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		5e-04
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		5e-04
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		5e-04
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		5e-04
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		7e-04
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		7e-04
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		7e-04
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		7e-04
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		7e-04
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		8e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		9e-04
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		9e-04

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 73  KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           +R+P L     L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E     
Sbjct: 9   RRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE--GLS 65
Query: 133 VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           V GT C V +  +   LVA A K    +DI V
Sbjct: 66  VTGTVCHVGKAEDRERLVATAVKLHGGIDILV 97

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           +VL+TG TKGIG  +A  F +AG NV + +RS   + S    L  E G  +V G + DVS
Sbjct: 43  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELG-ELGAGNVIGVRLDVS 101
Query: 142 EGNEVAD 148
           +    AD
Sbjct: 102 DPGSCAD 108

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           +V++TG TKGIG  +A  F +AG NV +  RS   +D+ V  L ++ G   V G + DVS
Sbjct: 12  SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADL-DQLGSGKVIGVQTDVS 70
Query: 142 EGNEVADLVAFAQKNLKYVDI 162
           +  +   L   A +    +D+
Sbjct: 71  DRAQCDALAGRAVEEFGGIDV 91

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG ++G+G+ +A+   +AG +V++ SR+ E    A Q L E++G + +   +CDVS  
Sbjct: 25  LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETM-AFRCDVSNY 83
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            EV  L+   ++    +D  V
Sbjct: 84  EEVKKLLEAVKEKFGKLDTVV 104

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 72  VKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
           V+R   L     L+T ST GIG A+A+   + G +V++ SR  E VD  V +L+ E    
Sbjct: 6   VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GL 63
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
            V GT C V +  +   LVA A      VDI V
Sbjct: 64  SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILV 96

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 78  LPPYNV-----LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           + PY++     ++TG + GIG A  +  L+AG  V  C+R  ER+ +A  +LR+ F    
Sbjct: 1   MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGAR 60
Query: 133 VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           ++ + CDV +  +V       ++ L    I V
Sbjct: 61  LFASVCDVLDALQVRAFAEACERTLGCASILV 92

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E    G  CDV   
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD--GRTCDVRSV 87
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E+  LVA   +    VD+ V
Sbjct: 88  PEIEALVAAVVERYGPVDVLV 108

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E    G  CDV   
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD--GRTCDVRSV 83
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E+  LVA   +    VD+ V
Sbjct: 84  PEIEALVAAVVERYGPVDVLV 104

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E    G  CDV   
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD--GRTCDVRSV 87
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E+  LVA   +    VD+ V
Sbjct: 88  PEIEALVAAVVERYGPVDVLV 108

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E    G  CDV   
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD--GRTCDVRSV 87
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E+  LVA   +    VD+ V
Sbjct: 88  PEIEALVAAVVERYGPVDVLV 108

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E    G  CDV   
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD--GRTCDVRSV 83
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E+  LVA   +    VD+ V
Sbjct: 84  PEIEALVAAVVERYGPVDVLV 104

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E    G  CDV   
Sbjct: 10  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD--GRTCDVRSV 67
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E+  LVA   +    VD+ V
Sbjct: 68  PEIEALVAAVVERYGPVDVLV 88

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E    G  CDV   
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD--GRTCDVRSV 87
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E+  LVA   +    VD+ V
Sbjct: 88  PEIEALVAAVVERYGPVDVLV 108

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E    G  CDV   
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD--GRTCDVRSV 87
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E+  LVA   +    VD+ V
Sbjct: 88  PEIEALVAAVVERYGPVDVLV 108

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF---GEQHVWGTKCDV 140
           ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   L+       +  V   +C++
Sbjct: 22  IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI 81
Query: 141 SEGNEVADLV 150
               EV +LV
Sbjct: 82  RNEEEVNNLV 91

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG
Sbjct: 11  VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG 56

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 78  LPPYNVLITGSTKGIGYALAKEFLKA--GD-NVIICSRSAERVDSAVQSLREEFGEQHVW 134
           L    VLITG++ GIG A A E+L+A  GD  +I+ +R  E+++   +++ +EF    V 
Sbjct: 31  LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH 90
Query: 135 GTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             + D+++  ++   +    +  K +DI V
Sbjct: 91  VAQLDITQAEKIKPFIENLPQEFKDIDILV 120

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG
Sbjct: 11  VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG 56

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWG 135
           ML     ++TGST GIG A+A E  KAG +V+I      E ++    +L  +FG +  + 
Sbjct: 1   MLKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYY- 59
Query: 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
              D+S+     D +A A + L  +DI V
Sbjct: 60  LNADLSDAQATRDFIAKAAEALGGLDILV 88

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 78  LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTK 137
           L     L+TG +KGIGYA+ +E    G  V  CSR+ + +D  ++  RE+    +V G+ 
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSV 76
Query: 138 CDV 140
           CD+
Sbjct: 77  CDL 79

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           +ITG+  GIG  +A  F  AG +V++   +A+  +  V  +++  G+   +  +CD++  
Sbjct: 15  IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AFACRCDITSE 72
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E++ L  FA   L  VDI V
Sbjct: 73  QELSALADFAISKLGKVDILV 93

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG++ GIG+A+A  + KAG  ++    + E VD  + + +      H  G  CDV++ 
Sbjct: 38  LVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAH--GYVCDVTDE 95
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
           + +  +VA  +  +  +DI V
Sbjct: 96  DGIQAMVAQIESEVGIIDILV 116

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 76  PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ-SLREEFGEQHVW 134
           P      V+ITGS+ GIG   A  F + G NV I  RS+ER++   Q  L+    E+ V 
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61
Query: 135 GTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
               DV+  +    ++    K    +D+ V
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLV 91

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           ++ G T G G A  +  ++ G  V++  R+    +S +  +REEFG + V   + D+++ 
Sbjct: 12  IVIGGTHGXGLATVRRLVEGGAEVLLTGRN----ESNIARIREEFGPR-VHALRSDIADL 66
Query: 144 NEVADLVAFAQKNLKYVDIW 163
           NE+A L A A + L  +D+ 
Sbjct: 67  NEIAVLGAAAGQTLGAIDLL 86

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           ++ G T G G A  +  ++ G  V++  R+    +S +  +REEFG + V   + D+++ 
Sbjct: 11  IVIGGTHGXGLATVRRLVEGGAEVLLTGRN----ESNIARIREEFGPR-VHALRSDIADL 65
Query: 144 NEVADLVAFAQKNLKYVDIW 163
           NE+A L A A + L  +D+ 
Sbjct: 66  NEIAVLGAAAGQTLGAIDLL 85

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT 136
           M  P    +TG + GIG A+A+     G  V  C+R A+ V +AV  LR       V G+
Sbjct: 21  MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGS 78
Query: 137 KCDVSEGNEV 146
            CDV+  +EV
Sbjct: 79  SCDVTSTDEV 88

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 85  ITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGN 144
           +TGS+ GIG+A+A+ + +AG +V I   S    D   + L++ +G  H    KC++S+  
Sbjct: 39  VTGSSGGIGWAVAEAYAQAGADVAIWYNS-HPADEKAEHLQKTYG-VHSKAYKCNISDPK 96
Query: 145 EVADLVAFAQKNLKYVDIWV 164
            V + ++  +K+   +D++V
Sbjct: 97  SVEETISQQEKDFGTIDVFV 116

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           L+TGST+GIG A+A++   AG  VII   S ER  +  + +  ++G
Sbjct: 11  LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG 56

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TGST GIG A+A   +  G NV+I  R  E V+  ++ +R ++ +  +     D+   
Sbjct: 14  LVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE 73
Query: 144 NEVADLVAFAQKNLKYVDIWVFMSDL 169
               D++       KY  + + +++L
Sbjct: 74  QGCQDVIE------KYPKVDILINNL 93

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 76  PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFG 129
           P L    VLITGS++GIG A A+ F +AG  V +  R A   +D  + S+R + G
Sbjct: 3   PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG 57

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+ +GIG  +AK   K+  +VI  SR+ +  DS V  ++  FG +   G   DVS+ 
Sbjct: 48  LVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK-SFGYES-SGYAGDVSKK 105
Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E+++++       K VDI V
Sbjct: 106 EEISEVINKILTEHKNVDILV 126

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 3   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 62
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF 165
           ++ GT  D++   +    VA A K +  +D+ + 
Sbjct: 63  YIAGTMEDMTFAEQ---FVAQAGKLMGGLDMLIL 93

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 22  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 81
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF 165
           ++ GT  D++   +    VA A K +  +D+ + 
Sbjct: 82  YIAGTMEDMTFAEQ---FVAQAGKLMGGLDMLIL 112

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 9   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 68
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF 165
           ++ GT  D++   +    VA A K +  +D+ + 
Sbjct: 69  YIAGTMEDMTFAEQ---FVAQAGKLMGGLDMLIL 99

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 25  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 84
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF 165
           ++ GT  D++   +    VA A K +  +D+ + 
Sbjct: 85  YIAGTMEDMTFAEQ---FVAQAGKLMGGLDMLIL 115

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 11  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 70
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF 165
           ++ GT  D++   +    VA A K +  +D+ + 
Sbjct: 71  YIAGTMEDMTFAEQ---FVAQAGKLMGGLDMLIL 101

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 18  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 77
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF 165
           ++ GT  D++   +    VA A K +  +D+ + 
Sbjct: 78  YIAGTMEDMTFAEQ---FVAQAGKLMGGLDMLIL 108

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 22  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 81
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF 165
           ++ GT  D++   +    VA A K +  +D+ + 
Sbjct: 82  YIAGTMEDMTFAEQ---FVAQAGKLMGGLDMLIL 112

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 67
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF 165
           ++ GT  D++   +    VA A K +  +D+ + 
Sbjct: 68  YIAGTMEDMTFAEQ---FVAQAGKLMGGLDMLIL 98

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 28  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 87
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF 165
           ++ GT  D++   +    VA A K +  +D+ + 
Sbjct: 88  YIAGTMEDMTFAEQ---FVAQAGKLMGGLDMLIL 118

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +LITG++ GIG  +A+E   AG  +++ +R   R+++    +R+  G         DV++
Sbjct: 7   ILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG--TALAQVLDVTD 64
Query: 143 GNEVADLVAFAQKNLKYVDIW 163
            + VA   AFAQ     VD W
Sbjct: 65  RHSVA---AFAQ---AAVDTW 79

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 13/65 (20%)
Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           +VL+TG  +GIG A+A+ F  AGD V I  RS E               +     KCD++
Sbjct: 23  SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP-------------PEGFLAVKCDIT 69
Query: 142 EGNEV 146
           +  +V
Sbjct: 70  DTEQV 74

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 28  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 87
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF 165
           ++ GT  D++   +    VA A K +  +D+ + 
Sbjct: 88  YIAGTMEDMTFAEQ---FVAQAGKLMGGLDMLIL 118

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 67
Query: 132 HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF 165
           ++ GT  D++   +    VA A K +  +D+ + 
Sbjct: 68  YIAGTMEDMTFAEQ---FVAQAGKLMGGLDMLIL 98

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           ++TG   GIG A A EF + G  +++       ++ AV  LR +  + H  G  CDV   
Sbjct: 35  VVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAH--GVVCDVRHL 92
Query: 144 NEVADLVAFAQKNLKYVDI 162
           +E+  L   A + L  VD+
Sbjct: 93  DEMVRLADEAFRLLGGVDV 111

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT----KC 138
           +L+TG++ GIG   A  + + G  VI+  R+ E++    Q + +E   Q  W T     C
Sbjct: 17  ILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTLDLLTC 76
Query: 139 DVSEGNEVADLVA 151
              E  +VAD +A
Sbjct: 77  TAEECRQVADRIA 89

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT----KC 138
           +L+TG++ GIG   A  + + G  VI+  R+ E++    Q + +E   Q  W T     C
Sbjct: 18  ILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTLDLLTC 77
Query: 139 DVSEGNEVADLVA 151
              E  +VAD +A
Sbjct: 78  TAEECRQVADRIA 90

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
           +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  W
Sbjct: 15  ILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW 66

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 12  RPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAH 71
Query: 132 HVWGTKCD--------VSEGNEVADLVAFAQKNLKYVDIWVFMSDLHS 171
           ++ GT  D        V  G  +  L      ++    + +F  D+HS
Sbjct: 72  YIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHS 119

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQ 131
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 3   RPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAH 62
Query: 132 HVWGTKCD--------VSEGNEVADLVAFAQKNLKYVDIWVFMSDLHS 171
           ++ GT  D        V  G  +  L      ++    + +F  D+HS
Sbjct: 63  YIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHS 110

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
           +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  W
Sbjct: 15  ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW 66

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
           +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  W
Sbjct: 36  ILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW 87

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS-LREEFGEQHVWGTKCDV 140
           +V+ITGS+ GIG + A  F K G  V I  R+ +R++   Q  L+     + +     DV
Sbjct: 28  SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 87
Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
           +E +   D++         +DI V
Sbjct: 88  TEASGQDDIINTTLAKFGKIDILV 111

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
           +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  W
Sbjct: 17  ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW 68

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	173
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	4e-22
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	9e-21
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-20
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	4e-19
3imf_A	257	Short chain dehydrogenase; structural genomics, in	5e-19
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	6e-19
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	9e-19
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-18
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-18
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-18
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	4e-18
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	5e-18
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	7e-18
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	8e-18
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-17
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-17
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-17
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-17
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	4e-17
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	4e-17
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	4e-17
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	5e-17
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	6e-17
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-16
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-16
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-16
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-16
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-16
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	4e-16
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	5e-16
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	5e-16
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	6e-16
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	7e-16
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	8e-16
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-15
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-15
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-15
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-15
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-15
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	2e-15
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	3e-15
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	3e-15
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	3e-15
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-15
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	4e-15
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	5e-15
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	5e-15
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	7e-15
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	7e-15
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	8e-15
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	8e-15
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	8e-15
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-14
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-14
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-14
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-14
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-14
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-14
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-14
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-14
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-14
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-14
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-14
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-14
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-14
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	3e-14
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-14
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-14
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	4e-14
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	4e-14
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	4e-14
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	4e-14
1xhl_A	297	Short-chain dehydrogenase/reductase family member	5e-14
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	6e-14
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	7e-14
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	7e-14
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	7e-14
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	8e-14
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	9e-14
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-13
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-13
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-13
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-13
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-13
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-13
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-13
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-13
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-13
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-13
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-13
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-13
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-13
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-13
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-13
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-13
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	5e-13
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	6e-13
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	6e-13
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-13
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	7e-13
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-12
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-12
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-12
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-12
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-12
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-12
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-12
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-12
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-12
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-12
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	4e-12
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	4e-12
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	4e-12
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	8e-12
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	8e-12
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-11
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-11
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-11
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-11
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	3e-11
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	3e-11
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	4e-11
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-11
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	7e-11
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	7e-11
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	7e-11
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	7e-11
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-10
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-10
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-10
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-10
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-10
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-10
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-10
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-10
4e4y_A	244	Short chain dehydrogenase family protein; structur	2e-10
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-10
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-10
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-10
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-10
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-10
4dqx_A	277	Probable oxidoreductase protein; structural genomi	4e-10
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	4e-10
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	4e-10
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	4e-10
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-10
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	5e-10
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	6e-10
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	8e-10
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	9e-10
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-09
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-09
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-09
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-09
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-09
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-09
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-09
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-09
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-09
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-09
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	8e-09
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-08
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-08
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	3e-08
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	7e-08
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-07
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-07
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-07
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	3e-07
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	7e-07
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	8e-07
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-06
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-06
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	6e-06
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	6e-06
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	6e-06
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	8e-06
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	8e-06
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-05
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	1e-05
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	1e-05
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-05
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-05
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-05
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-05
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	3e-05
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	4e-05
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	4e-05
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	6e-05
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	7e-05
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-04
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	1e-04
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	1e-04
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	2e-04
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-04
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	3e-04
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	6e-04
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	6e-04
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	7e-04
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	9e-04

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 88.4 bits (220), Expect = 4e-22
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG + V     DV+ 
Sbjct: 10  AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR-VLEVAVDVAT 68

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V  +V   + +    DI V
Sbjct: 69  PEGVDAVVESVRSSFGGADILV 90

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 85.7 bits (213), Expect = 9e-21
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 6/109 (5%)

Query: 61  DSSSSSSSSSSVKREPMLPPYN-----VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115
           ++ +  S   S  ++ MLPP +       ITG   G+G  +       G   +I SR  +
Sbjct: 2   NTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD 61

Query: 116 RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
            + +  + +  + G + V   +CDV + + V + V+   K   + +I +
Sbjct: 62  VLKATAEQISSQTGNK-VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVI 109

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 83.8 bits (208), Expect = 3e-20
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TGST GIG A+A   +  G NV+I  R  E V+  ++ +R ++ +  +     D+  
Sbjct: 13  ALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT 72

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                D++         VDI +
Sbjct: 73  EQGCQDVIE----KYPKVDILI 90

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 80.6 bits (200), Expect = 4e-19
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+T ST GIG A+A+   + G +V++ SR  E VD  V +L+ E     V GT C V +
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS--VTGTVCHVGK 74

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +   LVA A      VDI V
Sbjct: 75  AEDRERLVAMAVNLHGGVDILV 96

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 80.2 bits (199), Expect = 5e-19
 Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+ITG + G+G  +A  F K G  V+I  R+ E+++ A   + +  G+  +   + DV  
Sbjct: 9   VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ--ILTVQMDVRN 66

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            +++  ++    +    +DI +
Sbjct: 67  TDDIQKMIEQIDEKFGRIDILI 88

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 79.8 bits (198), Expect = 6e-19
 Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG ++GIGY + +E    G +V  CSR+ + ++  +   R +  +  V  + CD+S  
Sbjct: 13  LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK--VEASVCDLSSR 70

Query: 144 NEVADLVAFAQKNLK-YVDIWV 164
           +E  +L+     +    ++I V
Sbjct: 71  SERQELMNTVANHFHGKLNILV 92

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 80.0 bits (198), Expect = 9e-19
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
             ITG   GIG+ +A+ F++ G + +I SRS  RV +A + L    G +       DV  
Sbjct: 30  AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRR-CLPLSMDVRA 88

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V   V  A K    +DI +
Sbjct: 89  PPAVMAAVDQALKEFGRIDILI 110

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 79.6 bits (197), Expect = 1e-18
 Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 2/115 (1%)

Query: 52  SYHSPIIRADSSSSSSSSSSVKREPM--LPPYNVLITGSTKGIGYALAKEFLKAGDNVII 109
           S H     +    +      + R  M        L+TG++ GIG A+A+  ++ G  V+ 
Sbjct: 2   SSHHHHHHSSGRENLYFQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVG 61

Query: 110 CSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           C+R+   ++      +       +   +CD+S   ++  + +  +     VDI +
Sbjct: 62  CARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICI 116

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 79.1 bits (196), Expect = 2e-18
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG +KGIGYA+ +E    G  V  CSR+ + +D  ++  RE+     V G+ CD+   
Sbjct: 25  LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN--VEGSVCDLLSR 82

Query: 144 NEVADLVAFAQKNLK-YVDIWV 164
            E   L+          ++I V
Sbjct: 83  TERDKLMQTVAHVFDGKLNILV 104

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 78.5 bits (194), Expect = 4e-18
 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 8/104 (7%)

Query: 69  SSSVKREPMLPPY-----NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123
           +S  K    L P        ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   
Sbjct: 2   ASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADE 61

Query: 124 LREEFGEQH---VWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           L+          V   +C++    EV +LV         ++  V
Sbjct: 62  LQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLV 105

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 77.6 bits (192), Expect = 4e-18
 Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 1/83 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH-VWGTKCDVS 141
            +ITG+++GIG  +A      G  V++ +RS + ++     +               D++
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT 69

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +  +    +    +    VDI V
Sbjct: 70  DCTKADTEIKDIHQKYGAVDILV 92

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 77.6 bits (192), Expect = 5e-18
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG + GIG A  +  L+AG  V  C+R  ER+ +A  +LR+ F    ++ + CDV +
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V       ++ L    I V
Sbjct: 71  ALQVRAFAEACERTLGCASILV 92

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 77.2 bits (191), Expect = 7e-18
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++T  + G+G+A A E  + G  +++ SR+ E++++A   +        V     D+ E
Sbjct: 10  AVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE 69

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             ++  L   A+  L   DI V
Sbjct: 70  PGDIDRLFEKARD-LGGADILV 90

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 76.4 bits (189), Expect = 8e-18
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG+++GIG A+A+   + G  + + +RS +R++     L +E G + V+    DVS+
Sbjct: 5   AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE-VFYHHLDVSK 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V +      +    VD+ V
Sbjct: 64  AESVEEFSKKVLERFGDVDVVV 85

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 76.0 bits (188), Expect = 2e-17
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG TKGIG+A+ +EF   G  +  C+R+   ++  +   +++  +  V G+ CD S  
Sbjct: 18  LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ--VTGSVCDASLR 75

Query: 144 NEVADLVAFAQKNL-KYVDIWV 164
            E   L+          +DI +
Sbjct: 76  PEREKLMQTVSSMFGGKLDILI 97

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 75.8 bits (187), Expect = 2e-17
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           NV+   +  GIG   ++E +K      +     E   +A+  L+    + ++     DV+
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVNITFHTYDVT 65

Query: 142 -EGNEVADLVAFAQKNLKYVDIWV 164
               E   L+      LK VDI +
Sbjct: 66  VPVAESKKLLKKIFDQLKTVDILI 89

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 75.3 bits (186), Expect = 3e-17
 Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +++TG+  G+G AL    ++ G  V +  R  +R+           G   V G   D++ 
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE----LLLGNA-VIGIVADLAH 60

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V    A A +     ++ +
Sbjct: 61  HEDVDVAFAAAVEWGGLPELVL 82

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 75.7 bits (187), Expect = 3e-17
 Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 8/119 (6%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPY-------NVLITGSTKGIGYALAKEFLKAGD 105
           +H   + A +    S       EP            +VL+TG TKGIG  +A  F +AG 
Sbjct: 7   HHMGTLEAQTQGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGA 66

Query: 106 NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           NV + +RS   + S    L E      V G + DVS+    AD           +D+  
Sbjct: 67  NVAVAARSPRELSSVTAELGELGAGN-VIGVRLDVSDPGSCADAARTVVDAFGALDVVC 124

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 75.3 bits (186), Expect = 4e-17
 Identities = 23/82 (28%), Positives = 38/82 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+ +GIG A A+  L  G  V +   + E       +L E+F  Q     +CDV++
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 69

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             ++ D       +   +DI V
Sbjct: 70  QQQLRDTFRKVVDHFGRLDILV 91

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 75.4 bits (186), Expect = 4e-17
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
             SS    +   M  P    +TG + GIG A+A+     G  V  C+R A+ V +AV  L
Sbjct: 9   HHSSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL 68

Query: 125 REEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           R    +  V G+ CDV+  +EV   VA A +    + I V
Sbjct: 69  RAAGHD--VDGSSCDVTSTDEVHAAVAAAVERFGPIGILV 106

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 75.2 bits (186), Expect = 4e-17
 Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG ++G+G+ +A+   +AG +V++ SR+ E    A Q L E++G       +CDVS  
Sbjct: 25  LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAFRCDVSNY 83

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            EV  L+   ++    +D  V
Sbjct: 84  EEVKKLLEAVKEKFGKLDTVV 104

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 74.9 bits (185), Expect = 5e-17
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            LITG+TKGIG  +A+ F  AG  +++  R    +D+A ++L E+FG   V     D++E
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTD-VHTVAIDLAE 81

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            +  A+L   A +    +D+ V
Sbjct: 82  PDAPAELARRAAEAFGGLDVLV 103

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 74.9 bits (185), Expect = 6e-17
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V++TG TKGIG  +A  F +AG NV +  RS   +D+ V  L +    + V G + DVS+
Sbjct: 13  VVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK-VIGVQTDVSD 71

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +   L   A +    +D+  
Sbjct: 72  RAQCDALAGRAVEEFGGIDVVC 93

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 73.7 bits (182), Expect = 1e-16
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TGS +G+G+A A+    AG  VI+    A  +  +V +L  +  +    G   DV++ 
Sbjct: 13  LVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD--AHGVAFDVTDE 70

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
             +    +       +VDI +
Sbjct: 71  LAIEAAFSKLDAEGIHVDILI 91

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 73.8 bits (182), Expect = 2e-16
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 1/113 (0%)

Query: 52  SYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS 111
            +HS  +   + +    S   + +        L+TG   G+G  +A+     G +V+I  
Sbjct: 5   HHHSSGVDLGTENLYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITG 64

Query: 112 RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           R  + +D+A   +    G   V    CDV + ++VA L A  +     +D+ V
Sbjct: 65  RRPDVLDAAAGEIGGRTGNI-VRAVVCDVGDPDQVAALFAAVRAEFARLDLLV 116

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 73.7 bits (182), Expect = 2e-16
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVS 141
            L+TG   GIG  +A   + AG +V+I  R+ +++  AVQ L         +     D++
Sbjct: 14  YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT 73

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
             +E A  V         +   V
Sbjct: 74  NEDETARAVDAVTAWHGRLHGVV 96

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 73.4 bits (181), Expect = 2e-16
 Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 66  SSSSSSVKREPM--LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123
            SS    +   M        L+TG+T GIG  +A+   K G  V +C+R  E + + ++ 
Sbjct: 6   HSSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE 65

Query: 124 LREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           LRE   E    G  CDV    E+  LVA   +    VD+ V
Sbjct: 66  LREAGVE--ADGRTCDVRSVPEIEALVAAVVERYGPVDVLV 104

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 72.6 bits (179), Expect = 3e-16
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +LITG++ GIG  +A+E   AG  +++ +R   R+++    +R+  G         DV++
Sbjct: 7   ILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALA--QVLDVTD 64

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            + VA     A      +D+ V
Sbjct: 65  RHSVAAFAQAAVDTWGRIDVLV 86

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 72.2 bits (178), Expect = 4e-16
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            LITG++ GIG A A+     G  V I +R  E++ +    L     + HV   + DV++
Sbjct: 10  ALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVL--ELDVAD 67

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V   VA   + L  +DI V
Sbjct: 68  RQGVDAAVASTVEALGGLDILV 89

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 72.7 bits (179), Expect = 5e-16
 Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 6/115 (5%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGD---NVII 109
           +HS  +    S  S    + +R   L    VLITG++ GIG A A E+L+A +    +I+
Sbjct: 9   HHSSFLVPRGSHMSQGRKAAER---LAKKTVLITGASAGIGKATALEYLEASNGDMKLIL 65

Query: 110 CSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
            +R  E+++   +++ +EF    V   + D+++  ++   +    +  K +DI V
Sbjct: 66  AARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILV 120

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 72.3 bits (178), Expect = 5e-16
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWG 135
           ML     ++TGST GIG  +A      G ++++     A  ++     L  + G + V  
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK-VLY 59

Query: 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
              D+S+G  V  LV  A + +  +DI V
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILV 88

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 72.2 bits (178), Expect = 6e-16
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +++TG  +GIG A  +    AG NV +  RSA       + + +EFG +     +CDVS 
Sbjct: 17  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK-TKAYQCDVSN 75

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            + V   +     +L  +   +
Sbjct: 76  TDIVTKTIQQIDADLGPISGLI 97

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 71.8 bits (177), Expect = 7e-16
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             L+TGST+GIG A+A++   AG  VII   S ER  +  + +  ++G +   G + ++ 
Sbjct: 9   VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVK-AHGVEMNLL 67

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
               +          +  +DI V
Sbjct: 68  SEESINKAFEEIYNLVDGIDILV 90

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 71.4 bits (176), Expect = 8e-16
 Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVWGTKCDVS 141
           +L+TG+ +GIG A A+ +   G +V++  R+   +      ++     Q  +     + +
Sbjct: 17  ILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENA 76

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
              +  +L A  +     +D  +
Sbjct: 77  TAQQYRELAARVEHEFGRLDGLL 99

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 71.0 bits (175), Expect = 1e-15
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 2/83 (2%)

Query: 83  VLITG-STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           VL+T  +  GIG   A+  L  G +V+I      R+      L +  G   V    CDV+
Sbjct: 25  VLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL-GLGRVEAVVCDVT 83

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
               V  L+    +    +D+ V
Sbjct: 84  STEAVDALITQTVEKAGRLDVLV 106

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 71.1 bits (175), Expect = 1e-15
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG ++GIG  +A+  L+AG  V IC+R AE        L   +G+        D+S 
Sbjct: 32  ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL-SAYGD--CQAIPADLSS 88

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                 L     +    +DI V
Sbjct: 89  EAGARRLAQALGELSARLDILV 110

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 70.7 bits (174), Expect = 2e-15
 Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG+++GIG A+A++    G  V++ +R  E++ +  + +    GE       CD+S 
Sbjct: 32  AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGE--AESHACDLSH 89

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            + +A             D+ V
Sbjct: 90  SDAIAAFATGVLAAHGRCDVLV 111

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 70.6 bits (174), Expect = 2e-15
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG  + IG A      +AG  VII          AV+ LR E  +  V     DV+ 
Sbjct: 16  AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD--VSSVVMDVTN 73

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V + V    +    VDI V
Sbjct: 74  TESVQNAVRSVHEQEGRVDILV 95

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 70.2 bits (173), Expect = 2e-15
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG+  GIG  +A  F  AG +V++   +A+  +  V  +++  G+   +  +CD++ 
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AFACRCDITS 71

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             E++ L  FA   L  VDI V
Sbjct: 72  EQELSALADFAISKLGKVDILV 93

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 69.5 bits (171), Expect = 3e-15
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG+++GIG A A+     G  V + +R  +R    +Q+L  E           DV E
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKR----LQALAAELEGALP--LPGDVRE 61

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             + A  VA  ++    +   V
Sbjct: 62  EGDWARAVAAMEEAFGELSALV 83

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 69.9 bits (172), Expect = 3e-15
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG+T G G  + + F++ G  VI   R  ER    +Q L++E G+  ++  + DV  
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDN-LYIAQLDVRN 57

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              + +++A        +DI V
Sbjct: 58  RAAIEEMLASLPAEWCNIDILV 79

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 70.4 bits (173), Expect = 3e-15
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            +ITGST GIG A+A+   KAG N+++    + + + +    +        V     D++
Sbjct: 28  AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGT-VLHHPADMT 86

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           + +E+AD++A         DI V
Sbjct: 87  KPSEIADMMAMVADRFGGADILV 109

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 70.5 bits (173), Expect = 4e-15
 Identities = 19/82 (23%), Positives = 30/82 (36%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
             +TG   G+G  L ++ L  G  V I     + +D A+ +L  E     V G + DV+ 
Sbjct: 11  AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                      +     V I  
Sbjct: 71  REGFKMAADEVEARFGPVSILC 92

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 69.5 bits (171), Expect = 4e-15
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++ G T G+G A  +  ++ G  V++  R+   +        EEFG + V   + D+++
Sbjct: 11  AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIR----EEFGPR-VHALRSDIAD 65

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            NE+A L A A + L  +D+  
Sbjct: 66  LNEIAVLGAAAGQTLGAIDLLH 87

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 70.0 bits (172), Expect = 5e-15
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V++TG++KGIG  +A    K G +V++ +RS E +   V     E G          + +
Sbjct: 31  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMED 89

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                  VA A K +  +D+ +
Sbjct: 90  MTFAEQFVAQAGKLMGGLDMLI 111

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 69.4 bits (171), Expect = 5e-15
 Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             L+TG+++GIG+ +A      G  V+  + S    +    S++E+  +    G   ++S
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK--ARGLVLNIS 64

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   + +  A  +     +DI V
Sbjct: 65  DIESIQNFFAEIKAENLAIDILV 87

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 68.8 bits (169), Expect = 7e-15
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-------DNVIICSRSAERVDSAVQSLREEFGEQHVWG 135
           +LITG+ KGIG A+A EF +A          +++ SR+A  ++      R E        
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL--TDT 62

Query: 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
              D+S+  +V  L     +   ++D  V
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLV 91

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 69.2 bits (170), Expect = 8e-15
 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 6/106 (5%)

Query: 60  ADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119
           +       SS  V R   +    + ITG+T G G A A+ F +AG ++++  R  ER   
Sbjct: 2   SSHHHHHHSSGLVPRGSHMSS-TLFITGATSGFGEACARRFAEAGWSLVLTGRREER--- 57

Query: 120 AVQSLREEFGEQ-HVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
            +Q+L  E   +  V     DV +   ++  V    +    +   +
Sbjct: 58  -LQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLI 102

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 69.1 bits (170), Expect = 8e-15
 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             L+TG+T GIG A+A+ F   G  V +     +     ++ +  + G+  V+    ++S
Sbjct: 29  KALVTGATGGIGEAIARCFHAQGAIVGLHGTRED----KLKEIAADLGKD-VFVFSANLS 83

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   +  L   A++ ++ +DI V
Sbjct: 84  DRKSIKQLAEVAEREMEGIDILV 106

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 68.7 bits (169), Expect = 8e-15
 Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG+  GIG A+A  F KAG +V++    +E  ++   ++R+  G+    G +C+V++
Sbjct: 15  AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK--AIGLECNVTD 72

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                 ++  A      + + V
Sbjct: 73  EQHREAVIKAALDQFGKITVLV 94

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVS 141
            +ITGS+ GIG A A  F + G  V I  R AER++   Q +       Q+V     DV+
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
                 ++++        +DI V
Sbjct: 69  TDAGQDEILSTTLGKFGKLDILV 91

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 68.8 bits (168), Expect = 1e-14
 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG  KGIG+ + K+    G  V++  R   +   AV+ L+     ++V   + DV++
Sbjct: 15  AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS-NHENVVFHQLDVTD 73

Query: 143 GNE-VADLVAFAQKNLKYVDIWV 164
               ++ L  F + +   +DI V
Sbjct: 74  PIATMSSLADFIKTHFGKLDILV 96

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 68.3 bits (168), Expect = 1e-14
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG +KGIG A+A+   KAG  V I         + V  L         +  + DV++
Sbjct: 15  AIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENG-----GFAVEVDVTK 69

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V   +  A   L   D+  
Sbjct: 70  RASVDAAMQKAIDALGGFDLLC 91

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 68.4 bits (168), Expect = 1e-14
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVWGTKCDVS 141
           V+ITGS+ GIG   A  F + G NV I  RS+ER++   Q + +    E+ V     DV+
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
             +    ++    K    +D+ V
Sbjct: 69  TEDGQDQIINSTLKQFGKIDVLV 91

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 67.6 bits (166), Expect = 2e-14
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+   IG A A    + G  + +   + E ++ A  S+RE+  E       CDV+ 
Sbjct: 10  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE--ARSYVCDVTS 67

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V   V    ++   +D   
Sbjct: 68  EEAVIGTVDSVVRDFGKIDFLF 89

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 67.7 bits (166), Expect = 2e-14
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG+  GIG   A EF K    +++   +   ++      +    +  V     D S 
Sbjct: 34  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK--VHTFVVDCSN 91

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             ++       +  +  V I V
Sbjct: 92  REDIYSSAKKVKAEIGDVSILV 113

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 67.6 bits (166), Expect = 2e-14
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TGST GIG  +A+   +AG N+++         +   +     G +       D+S+
Sbjct: 7   ALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP---APALAEIARHGVK-AVHHPADLSD 62

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             ++  L A A++    VDI V
Sbjct: 63  VAQIEALFALAEREFGGVDILV 84

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 67.6 bits (166), Expect = 2e-14
 Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            LIT  TKG+G  + ++ L  G +V +   S       ++   ++  E+ +   + DV++
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER-LQFVQADVTK 68

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             ++  +V  A  +   +D  +
Sbjct: 69  KEDLHKIVEEAMSHFGKIDFLI 90

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 68.2 bits (167), Expect = 2e-14
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG   GIG A A EF + G  +++       ++ AV  LR +  +    G  CDV  
Sbjct: 34  AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD--AHGVVCDVRH 91

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            +E+  L   A + L  VD+  
Sbjct: 92  LDEMVRLADEAFRLLGGVDVVF 113

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 67.3 bits (165), Expect = 2e-14
 Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V + G+   IG  +AK+F   G  V    R+ E++   V  +    G   +     D   
Sbjct: 10  VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGR--IVARSLDARN 67

Query: 143 GNEVADLVAFAQKNLKYVDIWVF 165
            +EV   +  A  +   +++ +F
Sbjct: 68  EDEVTAFLNAADAHAP-LEVTIF 89

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 67.7 bits (166), Expect = 2e-14
 Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII--CSRSAERVDSAVQSLREEFGEQHVWGTKCDV 140
           +L+TG ++GIG ++         + ++   +RS       ++ L+E++G++  +    D+
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEA----PLKKLKEKYGDR-FFYVVGDI 59

Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
           +E + +  LV  A K    +D  V
Sbjct: 60  TEDSVLKQLVNAAVKGHGKIDSLV 83

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 67.5 bits (166), Expect = 3e-14
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             L+TG+++GIG A+A+   + G  VI  + S        Q++ +  G+    G   +V+
Sbjct: 11  VALVTGASRGIGKAIAELLAERGAKVIGTATSES----GAQAISDYLGDN-GKGMALNVT 65

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
               +  ++         VDI V
Sbjct: 66  NPESIEAVLKAITDEFGGVDILV 88

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 67.6 bits (166), Expect = 3e-14
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+ +GIG  +AK   K+  +VI  SR+ +  DS V  + + FG +   G   DVS+
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI-KSFGYE-SSGYAGDVSK 104

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             E+++++       K VDI V
Sbjct: 105 KEEISEVINKILTEHKNVDILV 126

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 67.6 bits (166), Expect = 3e-14
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG   G+G A A      G  + +   S+E ++++  ++ E   +  V  T  DVS+
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 75

Query: 143 GNEVADLVAFAQKNLKYVDI 162
             +V   V    +    +D 
Sbjct: 76  EAQVEAYVTATTERFGRIDG 95

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 67.2 bits (165), Expect = 3e-14
 Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+I+G    +G  LA+   + G ++++ +R+ ER++   + + +            D+++
Sbjct: 14  VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR--ALSVGTDITD 71

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +VA LV    K    VD+ +
Sbjct: 72  DAQVAHLVDETMKAYGRVDVVI 93

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 67.2 bits (165), Expect = 4e-14
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TGS  GIG A A+   + G  V++   +AE  ++  + +  + G         DVS+
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT--AISVAVDVSD 69

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                 +          +D  V
Sbjct: 70  PESAKAMADRTLAEFGGIDYLV 91

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 66.8 bits (164), Expect = 4e-14
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+ +GIG A+A   +K G  V I   +     +    + +  G       K DVS+
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH--AVAVKVDVSD 62

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            ++V   V  A+K L   D+ V
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIV 84

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 67.2 bits (165), Expect = 4e-14
 Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
             +TGS+ GIG+A+A+ + +AG +V I   S    + A     + +G       KC++S+
Sbjct: 37  ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ-KTYGVH-SKAYKCNISD 94

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V + ++  +K+   +D++V
Sbjct: 95  PKSVEETISQQEKDFGTIDVFV 116

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 66.8 bits (164), Expect = 4e-14
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW-GTKCDVS 141
           +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  W        
Sbjct: 15  ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTC 74

Query: 142 EGNEVADLVAFAQKNLKYVDI 162
                  L      N   +D 
Sbjct: 75  TSENCQQLAQRIAVNYPRLDG 95

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 66.8 bits (164), Expect = 4e-14
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +L+TG+  GIG A    F + G +++   R    +  AV         + +     DVS+
Sbjct: 9   ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAV----AALEAEAI-AVVADVSD 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V  + A A +    +    
Sbjct: 64  PKAVEAVFAEALEEFGRLHGVA 85

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 67.3 bits (165), Expect = 5e-14
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVS 141
           V+ITGS+ GIG + A  F K G  V I  R+ +R++   Q + +     + +     DV+
Sbjct: 29  VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 88

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           E +   D++         +DI V
Sbjct: 89  EASGQDDIINTTLAKFGKIDILV 111

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 66.8 bits (164), Expect = 6e-14
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 6/112 (5%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR 112
           +H  +   ++ +    S        L     ++TG+++GIG A+A E  + G  VI  + 
Sbjct: 5   HHHHMGTLEAQTQGPGSMDK----TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTAT 60

Query: 113 SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           +    +    +  ++ G +   G   +V++   V  LV    K    +++ V
Sbjct: 61  TEAGAEGIGAAF-KQAGLE-GRGAVLNVNDATAVDALVESTLKEFGALNVLV 110

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 66.0 bits (162), Expect = 7e-14
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+ +GIG A+A      G  VI+   +AE      ++     G++       D+S+
Sbjct: 9   ALVTGAAQGIGKAIAARLAADGATVIVSDINAE----GAKAAAASIGKK-ARAIAADISD 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V  L A  Q     +DI V
Sbjct: 64  PGSVKALFAEIQALTGGIDILV 85

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 65.7 bits (161), Expect = 7e-14
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 8/82 (9%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           ++ITG++ G+G  LAK +   G    +  RS  ++ +    L    G +       D++ 
Sbjct: 4   IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYR-----ARDLAS 58

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             EV  L              V
Sbjct: 59  HQEVEQLFEQLDSI---PSTVV 77

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 66.4 bits (163), Expect = 7e-14
 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           V+ITGS+ G+G ++A  F      V++      +  +S ++ +++  GE      K DV+
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AIAVKGDVT 67

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
             ++V +LV  A K    +D+ +
Sbjct: 68  VESDVINLVQSAIKEFGKLDVMI 90

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 66.0 bits (162), Expect = 8e-14
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG+  GIG A  + F K G  ++ C      +  A +++              DV++
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH-------PVVMDVAD 60

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V    A A  +L  +D  V
Sbjct: 61  PASVERGFAEALAHLGRLDGVV 82

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 66.4 bits (163), Expect = 9e-14
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            LITG++ GIG  +A  + +AG  V + +R ++ +      +    G+      +CDV++
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK--ALPIRCDVTQ 92

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            ++V  ++      L  +DI V
Sbjct: 93  PDQVRGMLDQMTGELGGIDIAV 114

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 66.0 bits (162), Expect = 1e-13
 Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG++ G G A+A  FL  GD V     SAE ++   ++    + ++ +   + DV++
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVL-RVRADVAD 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V   +A   +    +D+ V
Sbjct: 64  EGDVNAAIAATMEQFGAIDVLV 85

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 65.9 bits (161), Expect = 1e-13
 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            L+TG  KGIG A+ ++  +    +V++ +R   R  +AVQ L+ E         + D+ 
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF--HQLDID 64

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   +  L  F +K    +D+ V
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLV 87

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 65.7 bits (161), Expect = 1e-13
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITGS++GIG A A+ F +AG  V +  R A        +     G         D++ 
Sbjct: 10  VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA-FFAADLAT 68

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                 LV         +D+ +
Sbjct: 69  SEACQQLVDEFVAKFGGIDVLI 90

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 65.6 bits (161), Expect = 1e-13
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            LITGS +GIG A A+ +++ G  V I     ER   A      E G    +  + DV+ 
Sbjct: 11  ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAA----AEIGPA-AYAVQMDVTR 65

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            + +   +A   ++   +DI V
Sbjct: 66  QDSIDAAIAATVEHAGGLDILV 87

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 65.3 bits (160), Expect = 2e-13
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+ITG++ GIG A+A+ F + G  +++ +R  ER+        +     +    + DV++
Sbjct: 19  VVITGASSGIGEAIARRFSEEGHPLLLLARRVERL--------KALNLPNTLCAQVDVTD 70

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                  +  A+K     D  V
Sbjct: 71  KYTFDTAITRAEKIYGPADAIV 92

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 65.3 bits (160), Expect = 2e-13
 Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 62  SSSSSSSSSSVKREPM---LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERV 117
           SS     + ++  + M         ++TG  +GIG  +A+    +G ++ I     AE V
Sbjct: 8   SSGVDLGTENLYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGV 67

Query: 118 DSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
              +  L        V   + D+++ +     V         +D  V
Sbjct: 68  APVIAELSGLGAR--VIFLRADLADLSSHQATVDAVVAEFGRIDCLV 112

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 65.2 bits (160), Expect = 2e-13
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V++TG+  GIG A+AK+F      V+      +R++  VQ LR    E  V G K DVS+
Sbjct: 10  VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE--VLGVKADVSK 67

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V + V    +    +D+  
Sbjct: 68  KKDVEEFVRRTFETYSRIDVLC 89

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 65.1 bits (159), Expect = 2e-13
 Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
            ++TG+++G G ALA +  +    G  +++ +RS   +    + L  +  +  V     D
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68

Query: 140 VSEGNEVADLVAFAQK 155
           +     V  L++  ++
Sbjct: 69  LGTEAGVQRLLSAVRE 84

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 64.8 bits (159), Expect = 2e-13
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDV 140
             LITG+++GIG A+A    + G  + I   ++ E+ +   +      G   V     ++
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEA-RRRGSPLVAVLGANL 61

Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
            E      LV  A + L  +D  V
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLV 85

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 65.3 bits (160), Expect = 2e-13
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG+T GIG A AK F+  G  V I  R  + +D+A+  +    G     G + D + 
Sbjct: 32  AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GGG-AVGIQADSAN 86

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             E+  L    +     +D+  
Sbjct: 87  LAELDRLYEKVKAEAGRIDVLF 108

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 64.8 bits (159), Expect = 2e-13
 Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            L+TGS++G+G A A    + G N++I  +RS +      + + +   +  V   K +V 
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK--VLVVKANVG 64

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +  ++ ++     +    +D++V
Sbjct: 65  QPAKIKEMFQQIDETFGRLDVFV 87

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            LITG   G+G AL   F+  G  V +  +SAER+           G   V G   DV  
Sbjct: 8   ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE----VAHGGNAV-GVVGDVRS 62

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +              +D  +
Sbjct: 63  LQDQKRAAERCLAAFGKIDTLI 84

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V++TG+++GIG A+A    KAG  V++    + +    V    E +G Q       DVS+
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ-AITFGGDVSK 62

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V  ++  A      +D+ V
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVV 84

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 64.4 bits (158), Expect = 3e-13
 Identities = 20/89 (22%), Positives = 47/89 (52%), Gaps = 3/89 (3%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWG 135
           M    + L+TG+++GIG ++A +  + G NV +  + S E+ ++ V+ + +  G    + 
Sbjct: 1   MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI-KAKGVD-SFA 58

Query: 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
            + +V++ +EV  ++         +D+ V
Sbjct: 59  IQANVADADEVKAMIKEVVSQFGSLDVLV 87

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 64.4 bits (158), Expect = 3e-13
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             ++TGS++G+G A+A +    G N+++    A     A     +  G   V   K DV 
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN-VVVAKGDVK 65

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
              +V ++V  A      +DI V
Sbjct: 66  NPEDVENMVKTAMDAFGRIDILV 88

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 64.1 bits (157), Expect = 4e-13
 Identities = 15/100 (15%), Positives = 30/100 (30%), Gaps = 1/100 (1%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            +  + +     M       +TG   G+G A+++    AG  V +         S     
Sbjct: 10  GTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMH 69

Query: 125 REEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             + G         DV++             +   VD+ +
Sbjct: 70  ERDAGRD-FKAYAVDVADFESCERCAEKVLADFGKVDVLI 108

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 64.2 bits (157), Expect = 5e-13
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 6/104 (5%)

Query: 66  SSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSL 124
             SS  V R   +     ++TG+ K IG A+A +  + G  V+I    SAE   S    L
Sbjct: 9   HHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADEL 68

Query: 125 REEFGEQHVWGTKCDVSEGN----EVADLVAFAQKNLKYVDIWV 164
            +E         + D++  N       +++    +     D+ V
Sbjct: 69  NKERSNT-AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLV 111

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 63.7 bits (156), Expect = 6e-13
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            LITG+  G G  +AK F K G  V+I  R     +        E G+  +     D+S+
Sbjct: 12  ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVA----GEIGDAAL-AVAADISK 66

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V   V  A      VDI V
Sbjct: 67  EADVDAAVEAALSKFGKVDILV 88

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 63.6 bits (156), Expect = 6e-13
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWG 135
           ML     L+TG+++GIG A+A +  K G NV++  + + ++ +  V  + ++ G      
Sbjct: 1   MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEI-KKLGSD-AIA 58

Query: 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
            + DV+   +V ++V         VDI V
Sbjct: 59  VRADVANAEDVTNMVKQTVDVFGQVDILV 87

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 63.7 bits (156), Expect = 6e-13
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG   GIG A+A+ F   G ++ I            ++     G + V   KCDVS+
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADIAIADLVPAP---EAEAAIRNLGRR-VLTVKCDVSQ 65

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V              DI V
Sbjct: 66  PGDVEAFGKQVISTFGRCDILV 87

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 63.7 bits (156), Expect = 7e-13
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             L+TG+++GIG A+A E   AG  V +   S+      V +     G +  +  K DVS
Sbjct: 30  IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE-AFAVKADVS 88

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           + +EV  L A   +    +D+ V
Sbjct: 89  QESEVEALFAAVIERWGRLDVLV 111

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 63.3 bits (155), Expect = 1e-12
 Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW-----GTK 137
            L+TG+  GIG A++      G  V  C          V+ L     ++          +
Sbjct: 10  ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQ 69

Query: 138 CDVSEGNEVADLVAFAQKNL-KYVDIWV 164
            DVSE      L+   Q    +   + V
Sbjct: 70  ADVSEARAARCLLEQVQACFSRPPSVVV 97

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 63.0 bits (154), Expect = 1e-12
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG+  G+G A+A     AG  V +  R  + +         E G+        DV++
Sbjct: 31  AIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA----AEIGDD-ALCVPTDVTD 85

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            + V  L     +    VD+  
Sbjct: 86  PDSVRALFTATVEKFGRVDVLF 107

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 62.9 bits (154), Expect = 1e-12
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 10/82 (12%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG+ KGIG    +     G  V+  SR+   +DS V+          +     D+ +
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG------IEPVCVDLGD 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                  +     ++  VD+ V
Sbjct: 64  WEATERALG----SVGPVDLLV 81

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 63.0 bits (154), Expect = 1e-12
 Identities = 14/81 (17%), Positives = 23/81 (28%), Gaps = 8/81 (9%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           ++T      G   A    +AG  V     S ++ D                  +      
Sbjct: 5   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET--------YPQLKPMSE 56

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            E A+L+         VD+ V
Sbjct: 57  QEPAELIEAVTSAYGQVDVLV 77

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 62.9 bits (154), Expect = 1e-12
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG++ GIG A A  F + G  V++ +R+   +      +    GE        DV +
Sbjct: 11  AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE--AAALAGDVGD 68

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                 LV  A +    +D   
Sbjct: 69  EALHEALVELAVRRFGGLDTAF 90

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 62.6 bits (153), Expect = 1e-12
 Identities = 19/98 (19%), Positives = 41/98 (41%), Gaps = 13/98 (13%)

Query: 67  SSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           +++++   +P     +VL+TG  +GIG A+A+     G  V +  R +            
Sbjct: 2   TATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF----- 56

Query: 127 EFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
                   G + DV++ + V       +++   V++ V
Sbjct: 57  --------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLV 86

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 62.5 bits (153), Expect = 2e-12
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
            +TG+  GIG  + + F  +G  +I+  R A  +D A     +E G         DV++ 
Sbjct: 15  AVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAA----QELGAAVAARIVADVTDA 70

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
             +    A A+  +  V I V
Sbjct: 71  EAMTAAAAEAEA-VAPVSILV 90

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 62.5 bits (153), Expect = 2e-12
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 9/83 (10%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             LITG++ GIG A+A+   K G  VII   + E     ++SL     +       C+++
Sbjct: 16  TSLITGASSGIGSAIARLLHKLGSKVIISGSNEE----KLKSLGNALKDN-YTIEVCNLA 70

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
              E ++L+         +DI V
Sbjct: 71  NKEECSNLI----SKTSNLDILV 89

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 62.2 bits (152), Expect = 2e-12
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 83  VLITGS--TKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCD 139
           V++TG+   KG+G   A+   + G  V I  +  A+  +  V+ L + +G +     KC 
Sbjct: 23  VVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIK-AKAYKCQ 81

Query: 140 VSEGNEVADLVAFAQKNLKYVDIWV 164
           V        LV     +   +D ++
Sbjct: 82  VDSYESCEKLVKDVVADFGQIDAFI 106

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 61.8 bits (151), Expect = 3e-12
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 11/82 (13%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+ITG+++GIG  L + +      V+  SRS +                 +     D+S+
Sbjct: 31  VVITGASQGIGAGLVRAYRDRNYRVVATSRSIK----------PSADPD-IHTVAGDISK 79

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                 +V    +    +D  V
Sbjct: 80  PETADRIVREGIERFGRIDSLV 101

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 61.8 bits (151), Expect = 4e-12
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            LITG+  GIG A A      G  V    R+   V+     +    G+      + DVS+
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ--AIALEADVSD 88

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             ++ + V        ++DI V
Sbjct: 89  ELQMRNAVRDLVLKFGHLDIVV 110

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 61.3 bits (150), Expect = 4e-12
 Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG+ KGIG    K    +G  V+  +R+   + S  +          +     D+ + 
Sbjct: 11  LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG------IEPVCVDLGDW 64

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
           +     +      +  VD+ V
Sbjct: 65  DATEKALG----GIGPVDLLV 81

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 61.5 bits (150), Expect = 4e-12
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG++ G G A+A+  + AGD VI  +R  E +D     L   + ++       DV++
Sbjct: 8   WLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD----DLVAAYPDR-AEAISLDVTD 62

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
           G  +  + A        VD+ V
Sbjct: 63  GERIDVVAADVLARYGRVDVLV 84

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 60.6 bits (148), Expect = 8e-12
 Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             +TG   GIG ++ +   K G  V+  C  ++ R        ++  G    + ++ +V 
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRV-KWLEDQKALGFD-FYASEGNVG 73

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           + +         +  +  +D+ V
Sbjct: 74  DWDSTKQAFDKVKAEVGEIDVLV 96

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 60.6 bits (148), Expect = 8e-12
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 13/82 (15%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG  +GIG A+A+ F  AGD V I  RS E  +  +               KCD+++
Sbjct: 24  VLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL-------------AVKCDITD 70

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V       ++    V++ +
Sbjct: 71  TEQVEQAYKEIEETHGPVEVLI 92

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 60.3 bits (147), Expect = 1e-11
 Identities = 13/84 (15%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC--SRSAERVDSAVQSLREEFGEQHVWGTKCDV 140
            ++TG  +GIG  ++++    G ++ +    +  E+    ++ +     +        DV
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK--AVFVGLDV 62

Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
           ++       +  A + L   D+ V
Sbjct: 63  TDKANFDSAIDEAAEKLGGFDVLV 86

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG T GIG A+A +F++ G  V+I  R ++  + A +S+        +   + D S+
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSD 65

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            +    L    +K    V   V
Sbjct: 66  EDGWTKLFDATEKAFGPVSTLV 87

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII---CSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
           ++I G  K +G   AK F     N+++    ++ ++  +     L ++  +  V   + D
Sbjct: 14  IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAK--VALYQSD 71

Query: 140 VSEGNEVADLVAFAQKNLKYVDIWV 164
           +S   EVA L  FA+K    VDI +
Sbjct: 72  LSNEEEVAKLFDFAEKEFGKVDIAI 96

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 12/82 (14%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V +TG+ KGIGYA A  F++AG  V    ++  +      +               DV++
Sbjct: 10  VWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEV------------MDVAD 57

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +VA +        + +D  V
Sbjct: 58  AAQVAQVCQRLLAETERLDALV 79

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 59.1 bits (144), Expect = 3e-11
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 6/82 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V++TG  +GIG  + + F+ +G  V+IC +         ++L +E          CDV++
Sbjct: 12  VVVTGGGRGIGAGIVRAFVNSGARVVICDKDES----GGRALEQELPGAVFI--LCDVTQ 65

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            ++V  LV+   +    +D  V
Sbjct: 66  EDDVKTLVSETIRRFGRLDCVV 87

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 59.1 bits (143), Expect = 3e-11
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             ++   T  +G   A      G  V++C R  ++  +A  S+ + F          + +
Sbjct: 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA---AETA 177

Query: 142 EGNEVADLVAFAQ 154
           +    A+ V  A 
Sbjct: 178 DDASRAEAVKGAH 190

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 59.1 bits (144), Expect = 4e-11
 Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 9/108 (8%)

Query: 62  SSSSSSSSSSVKREPMLPPYNV-----LITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116
           SS     + ++  + M  P+++     ++TG+  GIG A+A  + +AG +V+   R+ + 
Sbjct: 8   SSGVDLGTENLYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DG 66

Query: 117 VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           V      + +  G         D+++    A++        + VD+ V
Sbjct: 67  VKEVADEIADGGGS--AEAVVADLADLEGAANVAEELAATRR-VDVLV 111

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 58.7 bits (143), Expect = 4e-11
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +LITG+++ +G   A   L+ G  VII  R+     ++V  LR+            D S 
Sbjct: 30  ILITGASQRVGLHCALRLLEHGHRVIISYRTEH---ASVTELRQA----GAVALYGDFSC 82

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              +   +   +     +   V
Sbjct: 83  ETGIMAFIDLLKTQTSSLRAVV 104

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 58.3 bits (142), Expect = 7e-11
 Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 3/104 (2%)

Query: 62  SSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSA 120
           SS     + ++  + M     VL+TG ++GIG A+ +   + G  V +  + + E  D+ 
Sbjct: 8   SSGVDLGTENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAV 67

Query: 121 VQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           V ++ E  GE        DV    ++A + +   +    +D  V
Sbjct: 68  VAAITESGGE--AVAIPGDVGNAADIAAMFSAVDRQFGRLDGLV 109

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 58.3 bits (142), Expect = 7e-11
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG+  GIG A+A+     G +V+      +  D+A      + G       + DVS+
Sbjct: 32  AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA----TKIGCGAA-ACRVDVSD 86

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             ++  +V         VD  V
Sbjct: 87  EQQIIAMVDACVAAFGGVDKLV 108

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 57.9 bits (141), Expect = 7e-11
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 11/81 (13%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+TG ++GIG A+A+  +  G  V I SR+ E    ++ ++              D+ + 
Sbjct: 6   LVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV----------PLPTDLEKD 55

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            +   LV  A + L  + + V
Sbjct: 56  -DPKGLVKRALEALGGLHVLV 75

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 58.0 bits (141), Expect = 7e-11
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           ++TG+++GIG  +A +  KAG  V I  R  + +    Q  +   G+       CD S+ 
Sbjct: 9   VVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQ--CVPVVCDSSQE 66

Query: 144 NEVADLVAFAQK-NLKYVDIWV 164
           +EV  L     +     +D+ V
Sbjct: 67  SEVRSLFEQVDREQQGRLDVLV 88

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 8/95 (8%)

Query: 68  SSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSL 124
           SS  V R   +   ++LITG  +G+G  L K  L       ++    R+ E+    ++ L
Sbjct: 11  SSGLVPRGSHMN--SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDL 67

Query: 125 REEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159
            +     H+   + D+   +    LVA  +   K 
Sbjct: 68  AKNHSNIHI--LEIDLRNFDAYDKLVADIEGVTKD 100

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 57.5 bits (140), Expect = 1e-10
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+ITG  +G+G   A++ + AG  V++     E   +       E G+        DV+ 
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA----RELGDAAR-YQHLDVTI 62

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +   +VA+A++    VD  V
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLV 84

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 63  SSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
            S+S+  SS  R   L     +ITG   GIG   AK F++ G  V+I   + +       
Sbjct: 2   GSTSTPDSSTNR---LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN 58

Query: 123 SLREEFGEQHVWGTKCDVSEGNEVADLVAFA 153
           ++        V    CDV++  +V +LV   
Sbjct: 59  NIGSPDVISFV---HCDVTKDEDVRNLVDTT 86

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 57.5 bits (140), Expect = 1e-10
 Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L++G  +G+G +  +  +  G  V+      E   +    L +            DV++
Sbjct: 10  ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA-----ARYVHLDVTQ 64

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +    V  A      + + V
Sbjct: 65  PAQWKAAVDTAVTAFGGLHVLV 86

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 57.9 bits (140), Expect = 1e-10
 Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 15/115 (13%)

Query: 63  SSSSSSSSSVKREPMLPPYN------VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116
           +S +      +   MLP         V ITG+++GIG A+A +  K G N++I +++A+ 
Sbjct: 22  ASMTGGQQMGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81

Query: 117 -------VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
                  + +A + +    G+        DV +  +++  V  A K    +DI V
Sbjct: 82  HPKLLGTIYTAAEEIEAVGGK--ALPCIVDVRDEQQISAAVEKAIKKFGGIDILV 134

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------RVDSAVQSLREEFGEQHVWG 135
           + ITG+++GIG A+A    + G NV I ++SA         + SA  ++    G+     
Sbjct: 9   LFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ--GLA 66

Query: 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
            KCD+ E ++V   VA        +DI V
Sbjct: 67  LKCDIREEDQVRAAVAATVDTFGGIDILV 95

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           +++ G+ + IG A A  F + G NV++  + +AE   +AV  + +          K D++
Sbjct: 11  IVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS--ALAIKADLT 68

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
              EV   ++ A      +   V
Sbjct: 69  NAAEVEAAISAAADKFGEIHGLV 91

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 9/89 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------RVDSAVQSLREEFGEQHVWG 135
           + I+G ++GIG A+AK     G NV + ++SAE        + +A + + E  G+     
Sbjct: 12  MFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ--ALP 69

Query: 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
              D+ +G+ VA  VA   +    +DI V
Sbjct: 70  IVGDIRDGDAVAAAVAKTVEQFGGIDICV 98

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 56.4 bits (137), Expect = 2e-10
 Identities = 14/73 (19%), Positives = 37/73 (50%), Gaps = 11/73 (15%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           N L+TG +KGIG A+ +  L+  ++ +I              +++ F  +++   K D++
Sbjct: 6   NYLVTGGSKGIGKAVVELLLQNKNHTVINID-----------IQQSFSAENLKFIKADLT 54

Query: 142 EGNEVADLVAFAQ 154
           +  ++ +++   +
Sbjct: 55  KQQDITNVLDIIK 67

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 13/82 (15%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V++TG++ GIG A+A+ F+  G  VI  S                 GE      +CDV+ 
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP-------------GEAKYDHIECDVTN 57

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            ++V   +    K    + + V
Sbjct: 58  PDQVKASIDHIFKEYGSISVLV 79

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 56.5 bits (137), Expect = 2e-10
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            +ITG  + IG+++A    + G  V++    S       V  L            K D+S
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGS-AVLCKGDLS 72

Query: 142 EGNEVAD----LVAFAQKNLKYVDIWV 164
             + + D    ++  + +     D+ V
Sbjct: 73  LSSSLLDCCEDIIDCSFRAFGRCDVLV 99

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 5/71 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG+  GIG   ++   +AG  V++       +  A        G   V     D++ 
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAA----ASVGRGAV-HHVVDLTN 68

Query: 143 GNEVADLVAFA 153
              V  L+ F 
Sbjct: 69  EVSVRALIDFT 79

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 56.1 bits (136), Expect = 3e-10
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG   G+G A A+  +  G + ++        ++      ++ G         DV+ 
Sbjct: 15  AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA----KKLGNN-CVFAPADVTS 69

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V   +A A+     VD+ V
Sbjct: 70  EKDVQTALALAKGKFGRVDVAV 91

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 56.0 bits (136), Expect = 4e-10
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 17/81 (20%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+  +++GIG A+A    + G  V IC+R+ E +  +                 CD+   
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY-----------VVCDLR-- 69

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
                 +    + +K VDI V
Sbjct: 70  ----KDLDLLFEKVKEVDILV 86

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 56.0 bits (136), Expect = 4e-10
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG   GIG A A+ F K G  V++   + +           E G +   G + DVS 
Sbjct: 30  CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVA----NEIGSKAF-GVRVDVSS 84

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +   +V         VD+ V
Sbjct: 85  AKDAESMVEKTTAKWGRVDVLV 106

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 56.1 bits (136), Expect = 4e-10
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG++ G+G A+ +   + G  V+         +        E G   V     DV+ 
Sbjct: 10  FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPA----AELGAA-VRFRNADVTN 64

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +    +AFA++   +V   V
Sbjct: 65  EADATAALAFAKQEFGHVHGLV 86

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 55.6 bits (135), Expect = 4e-10
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 9/82 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG+T G+G  + K+  +    V    R+ E     + +L E  G + +   + D+ +
Sbjct: 8   AVVTGATGGMGIEIVKDLSRDHI-VYALGRNPEH----LAALAEIEGVEPI---ESDIVK 59

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                  V    KNL +VD  V
Sbjct: 60  EVLEEGGVD-KLKNLDHVDTLV 80

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 55.3 bits (134), Expect = 4e-10
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 13/82 (15%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG+T G+G A A+     G ++++  R A  +    + +              D+++
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVGA-----RAL--PADLAD 53

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             E   L+  A      +D+ V
Sbjct: 54  ELEAKALLEEAGP----LDLLV 71

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 55.9 bits (135), Expect = 5e-10
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH---VWGTKCD 139
           +LITG++ G G   A+    AG  V    R     +++       F   +   +   + D
Sbjct: 8   ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELD 67

Query: 140 VSEGNEVADLVAFAQKNLKYVDIWV 164
           V     V   +         +D+ +
Sbjct: 68  VQSQVSVDRAIDQIIGEDGRIDVLI 92

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 55.6 bits (135), Expect = 5e-10
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 12/82 (14%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG + GIG A+    ++ G  V+  S   +   +     +             DV+ 
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK------------IDVTN 64

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             EV + V    K    +DI V
Sbjct: 65  EEEVKEAVEKTTKKYGRIDILV 86

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 55.3 bits (134), Expect = 6e-10
 Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 13/82 (15%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+  GIG A+      AG  V +  R+   + + +                 D+ E
Sbjct: 31  ALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-------------HLPGDLRE 77

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                 L       L  +DI V
Sbjct: 78  AAYADGLPGAVAAGLGRLDIVV 99

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 55.4 bits (134), Expect = 8e-10
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 13/131 (9%)

Query: 35  SSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGY 94
            ST+RF      L A  +Y    +    ++ S+  +   +   L     ++TG+ +GIG 
Sbjct: 175 ESTMRFI-----LSAKSAYVDGQVFRVGAADSTPPADWDK--PLDGKVAVVTGAARGIGA 227

Query: 95  ALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154
            +A+ F + G  V+            ++ + ++ G         DV+  + V  + A   
Sbjct: 228 TIAEVFARDGATVVAIDVDGAA--EDLKRVADKVGGT---ALTLDVTADDAVDKITAHVT 282

Query: 155 KNL-KYVDIWV 164
           ++    VDI V
Sbjct: 283 EHHGGKVDILV 293

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 54.8 bits (133), Expect = 9e-10
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG  +GIG A+A+ F + G  V +C    E  + A     E  G       + D+ +
Sbjct: 9   VLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-----EAIGGAFF---QVDLED 60

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             E    V  A   L  VD+ V
Sbjct: 61  ERERVRFVEEAAYALGRVDVLV 82

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 12/82 (14%), Positives = 21/82 (25%), Gaps = 14/82 (17%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +L+ G +  +G  + K F     N I                                S 
Sbjct: 25  ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--------------SFTIKDSG 70

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             E+  ++         VD +V
Sbjct: 71  EEEIKSVIEKINSKSIKVDTFV 92

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           ++TG+++GIG A+A      G  V+I  +  A   +     +    G+      + DVS+
Sbjct: 31  IVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGK--ALTAQADVSD 88

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
              V  L A A++    VD+ V
Sbjct: 89  PAAVRRLFATAEEAFGGVDVLV 110

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +++G   G+G A  +     G  V+I   +AE+  +      +E G +       +V+ 
Sbjct: 33  AIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA----DELGNR-AEFVSTNVTS 87

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            + V   +  A +  +     V
Sbjct: 88  EDSVLAAIEAANQLGRLRYAVV 109

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 54.4 bits (132), Expect = 1e-09
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG   G+G  + K  L  G  V     +             E GE+     + DVS 
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA----AELGER-SMFVRHDVSS 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +   ++A  Q+ L  +++ V
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLV 85

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 8/111 (7%)

Query: 60  ADSSSSSSSSSSVKREPMLPPYN-----VLITGSTKGIGYALAKEFLKAGDNVII-CSRS 113
             SS     + ++  + M+   +       +TG ++GIG A+AK     G  V +    +
Sbjct: 6   HHSSGVDLGTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA 65

Query: 114 AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           AER  + V  + +  G       + D  +   +   +    + L  +DI V
Sbjct: 66  AERAQAVVSEIEQAGGR--AVAIRADNRDAEAIEQAIRETVEALGGLDILV 114

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 54.8 bits (132), Expect = 1e-09
 Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 29/153 (18%)

Query: 30  HCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGST 89
           H  + SS +  R +         +HS  +    S  ++ +  V           L+TG+ 
Sbjct: 6   HHHHHSSGLVPRGSHMGSSHHHHHHSSGLVPRGSHMTAPTVPV----------ALVTGAA 55

Query: 90  KGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVS------- 141
           K +G ++A+     G  V +   RSA   ++   +L            + D+S       
Sbjct: 56  KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS-AITVQADLSNVATAPV 114

Query: 142 ----------EGNEVADLVAFAQKNLKYVDIWV 164
                          A+LVA    +    D+ V
Sbjct: 115 SGADGSAPVTLFTRCAELVAACYTHWGRCDVLV 147

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 9/112 (8%)

Query: 60  ADSSSSSSSSSSVKREPMLPPYN------VLITGSTKGIGYALAKEFLKAGDNVII-CSR 112
           A +     S       P+ P          L+TG+ +GIG  +A E  + G  VI+  + 
Sbjct: 3   AVTQPRGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN 62

Query: 113 SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           S E  +  V ++++   +      K +V    ++  +   A K    +DI  
Sbjct: 63  STESAEEVVAAIKKNGSD--AACVKANVGVVEDIVRMFEEAVKIFGKLDIVC 112

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 54.1 bits (131), Expect = 2e-09
 Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 63  SSSSSSSSSVKREPMLPPYN--VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDS 119
           + S+  +SS   +   P      L TG+ +GIG  +A E  + G +V++    S++  + 
Sbjct: 2   APSADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEE 61

Query: 120 AVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
            V  L++   +      + D+S+ +EV  L   A  +   +D  +
Sbjct: 62  VVAELKKLGAQ--GVAIQADISKPSEVVALFDKAVSHFGGLDFVM 104

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 53.6 bits (130), Expect = 2e-09
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 7/69 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +++T + +GIG A A  F + G  VI    +       +Q L +  G Q       DV++
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINES----KLQELEKYPGIQTR---VLDVTK 61

Query: 143 GNEVADLVA 151
             ++     
Sbjct: 62  KKQIDQFAN 70

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 53.5 bits (129), Expect = 3e-09
 Identities = 15/85 (17%), Positives = 36/85 (42%), Gaps = 7/85 (8%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWGTK 137
           P +V++TG+ +GIG  L ++ +K  +  ++I  +R  E+         +   +  V    
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-----KSIKDSRVHVLP 57

Query: 138 CDVSEGNEVADLVAFAQKNLKYVDI 162
             V+    +   V+   + +    +
Sbjct: 58  LTVTCDKSLDTFVSKVGEIVGSDGL 82

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 52.4 bits (126), Expect = 8e-09
 Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 19/100 (19%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            L+TG+ K +G ++A+     G  V +   RSA   ++   +L            + D+S
Sbjct: 12  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS-AITVQADLS 70

Query: 142 E-----------------GNEVADLVAFAQKNLKYVDIWV 164
                                 A+LVA    +    D+ V
Sbjct: 71  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLV 110

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           L+TGS +GIG A+A    + G  V++  + S +  +  V  ++    +      K D+ +
Sbjct: 22  LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSD--AIAIKADIRQ 79

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             E+  L   A  +  ++DI V
Sbjct: 80  VPEIVKLFDQAVAHFGHLDIAV 101

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 13/81 (16%), Positives = 24/81 (29%), Gaps = 8/81 (9%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143
           L+T +    G A  +   + G  V+    S        +   E  G              
Sbjct: 5   LVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPG--------TIALAE 56

Query: 144 NEVADLVAFAQKNLKYVDIWV 164
            +   LV    ++ + +D  V
Sbjct: 57  QKPERLVDATLQHGEAIDTIV 77

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 4/82 (4%)

Query: 37  TVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYAL 96
           +V  R    +L    +Y    +  D    S +S+     P+     V ITGS   +G AL
Sbjct: 108 SVSTRLPASTLTGMFAYRQTQLIEDLKFLSRTSTLFDGSPL----TVAITGSRGLVGRAL 163

Query: 97  AKEFLKAGDNVIICSRSAERVD 118
             +    G  VI   R   +  
Sbjct: 164 TAQLQTGGHEVIQLVRKEPKPG 185

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 49.2 bits (118), Expect = 7e-08
 Identities = 13/84 (15%), Positives = 28/84 (33%), Gaps = 14/84 (16%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V++ G    +G A+ + F K G  V+    SA     +   +              + + 
Sbjct: 6   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD------------GNKNW 53

Query: 143 GNEVADLVAFAQKNLKY--VDIWV 164
             +   ++     +L+   VD   
Sbjct: 54  TEQEQSILEQTASSLQGSQVDGVF 77

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 6/72 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           + ITGS  GIG AL +   +AG  VI   R    +++ +       G +        +  
Sbjct: 4   IAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADL---STPGGRET--AVAAVLDR 58

Query: 143 GNEVAD-LVAFA 153
              V D LV  A
Sbjct: 59  CGGVLDGLVCCA 70

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 8/73 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++TG   G+G A  K  L AG  V++     E V         + G++       DV++
Sbjct: 12  AVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV-------ADLGDR-ARFAAADVTD 63

Query: 143 GNEVADLVAFAQK 155
              VA  +  A+ 
Sbjct: 64  EAAVASALDLAET 76

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 47.8 bits (114), Expect = 3e-07
 Identities = 17/75 (22%), Positives = 24/75 (32%), Gaps = 4/75 (5%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGE-QHVWGTKC 138
           VLITG + GIG  LA            V    R  +      ++ R        +   + 
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 139 DVSEGNEVADLVAFA 153
           DV +   VA      
Sbjct: 65  DVRDSKSVAAARERV 79

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 9/82 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V+ITG+  G+G   A+E  + G  VI+  R   + ++A +++  +     V   + D+ +
Sbjct: 19  VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ-----VEVRELDLQD 73

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            + V     FA   +   D+ +
Sbjct: 74  LSSVR---RFADG-VSGADVLI 91

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 46.5 bits (111), Expect = 7e-07
 Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 7/53 (13%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV------DSAVQSLREEFG 129
           +L+ G++  +G A+ +  L+    VI   R +  V        +++ + E+ G
Sbjct: 6   ILLIGASGTLGSAVKER-LEKKAEVITAGRHSGDVTVDITNIDSIKKMYEQVG 57

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 46.5 bits (111), Expect = 8e-07
 Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 19/69 (27%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           ++I+G   GIG A  K    AG  ++        V                     D+S 
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-------------------IADLST 44

Query: 143 GNEVADLVA 151
                  +A
Sbjct: 45  AEGRKQAIA 53

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD-SAVQSLREEFGEQHVWGTKCDVS 141
            L+TG   GIG A A  + + G +V I    AE  D   V++L EE G +       D+S
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG-RKAVLLPGDLS 110

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           + +    LV  A++ L  +DI  
Sbjct: 111 DESFARSLVHKAREALGGLDILA 133

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQ--HVWGTK 137
           VL+TG T  +G  +A+  +       N+++ SR       A   L  +       V    
Sbjct: 533 VLVTGGTGALGAEVARHLVIERGVR-NLVLVSRRGPAASGA-AELVAQLTAYGAEVSLQA 590

Query: 138 CDVSEGNEVADLVA 151
           CDV++   +A ++A
Sbjct: 591 CDVADRETLAKVLA 604

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Length = 212

 Score = 43.7 bits (102), Expect = 6e-06
 Identities = 12/52 (23%), Positives = 22/52 (42%)

Query: 85  ITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT 136
           + G T  +G  LA      G  +++ SR  E+ ++     R   G+  + G 
Sbjct: 5   LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGM 56

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 43.9 bits (104), Expect = 6e-06
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 62  SSSSSSSSSSVKREPM-LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
            SS      S  RE +      VL+ G+   +   L  E    G   +   R+ E+  
Sbjct: 2   GSSHHHHHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGP 59

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 43.7 bits (104), Expect = 6e-06
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 9/88 (10%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           L+TG+++GIG A+AK     G  V I      E  +  V  ++   G    +    ++  
Sbjct: 11  LVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS--AFSIGANLES 68

Query: 143 GNEVADLVAFAQKNLKY------VDIWV 164
            + V  L +     L+        DI +
Sbjct: 69  LHGVEALYSSLDNELQNRTGSTKFDILI 96

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 43.5 bits (103), Expect = 8e-06
 Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 10/82 (12%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+ G    +G    + F      V           SA   ++          T     +
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK---------MTDSFTEQ 60

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            ++V   V     + K VD  +
Sbjct: 61  ADQVTAEVGKLLGDQK-VDAIL 81

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 43.7 bits (104), Expect = 8e-06
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 14/94 (14%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR------------SAERVDSAVQSLREEFGE 130
            LITG  +G+G + A    +AG ++ IC R            +A+ +   V  L E+ G 
Sbjct: 13  ALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVA-LVEKTGR 71

Query: 131 QHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           +     K DV +   +   VA A+  L  +DI +
Sbjct: 72  R-CISAKVDVKDRAALESFVAEAEDTLGGIDIAI 104

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 15/95 (15%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-------------SRSAERVDSAVQSLREEFG 129
             ITG+ +G G A A      G ++I                 S + +   V+ +     
Sbjct: 14  AFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR 73

Query: 130 EQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
              +     D  + + +  +V      L  +DI V
Sbjct: 74  R--IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIV 106

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 43.0 bits (101), Expect = 1e-05
 Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 3/75 (4%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT 136
           M     VLI G T  IG  +    +  G    +  R     +     +   F +      
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 60

Query: 137 KCDVSEGNEVADLVA 151
           +  +    +   LV 
Sbjct: 61  EASLD---DHQRLVD 72

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 82  NVLITGSTKG-IGYALAKEFLKAGDNVII-CSR-SAERVDSAVQSLREEFG 129
            VLITG+ KG IG  + +  L+ G  V++  SR S +  D   QS+  ++G
Sbjct: 478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYY-QSIYAKYG 527

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 14/94 (14%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC------------SRSAERVDSAVQSLREEFGE 130
             ITG+ +G G   A    + G +++                S E +   V+ + E+   
Sbjct: 49  AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR 108

Query: 131 QHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             +   + DV +   +  +V  A     ++DI V
Sbjct: 109 --IIARQADVRDLASLQAVVDEALAEFGHIDILV 140

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 14/94 (14%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC------------SRSAERVDSAVQSLREEFGE 130
             ITG+ +G G A A      G ++I                + E + + V+ + +    
Sbjct: 16  AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSR 75

Query: 131 QHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             +   + DV +   ++  +      L  +DI V
Sbjct: 76  --IVARQADVRDRESLSAALQAGLDELGRLDIVV 107

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 15/95 (15%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-------------SRSAERVDSAVQSLREEFG 129
             ITG+ +G G + A      G ++I C               S E +D   + + ++  
Sbjct: 18  AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR 77

Query: 130 EQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
           +        DV +   + +LVA   +    +D+ V
Sbjct: 78  K--ALTRVLDVRDDAALRELVADGMEQFGRLDVVV 110

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG   GIG A++  F K G N+ I     E   +  +   E+ G         D+S+
Sbjct: 50  VLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG-VKCVLLPGDLSD 108

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
                D+V    + L  ++I V
Sbjct: 109 EQHCKDIVQETVRQLGSLNILV 130

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 14/94 (14%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC------------SRSAERVDSAVQSLREEFGE 130
             ITG+ +G G + A    + G ++I                + + +   V+ +      
Sbjct: 31  AFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRR 90

Query: 131 QHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
             +  ++ DV + + +   V      L  +DI +
Sbjct: 91  --IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVL 122

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 15/98 (15%), Positives = 34/98 (34%), Gaps = 18/98 (18%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC----------------SRSAERVDSAVQSLRE 126
             +TG+ +G G + A    + G ++I                  + + E +      ++ 
Sbjct: 14  AFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG 73

Query: 127 EFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
                 +   + DV + + +   V    + L  +DI V
Sbjct: 74  HNRR--IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIV 109

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Length = 215

 Score = 41.1 bits (96), Expect = 4e-05
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 50  SKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII 109
            +    P+I      S SS + V  E       V I GS      +LA   + +G  V++
Sbjct: 2   PEEMDKPLISLHLVDSDSSLAKVPDEAP----KVGILGSGD-FARSLATRLVGSGFKVVV 56

Query: 110 CSRSAERVDSAVQSLRE 126
            SR+ +R      S  +
Sbjct: 57  GSRNPKRTARLFPSAAQ 73

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 41.1 bits (97), Expect = 6e-05
 Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 14/73 (19%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG   G+G A A      G  V++     E  D              +   + DV+ 
Sbjct: 5   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGED--------------LIYVEGDVTR 50

Query: 143 GNEVADLVAFAQK 155
             +V   VA AQ+
Sbjct: 51  EEDVRRAVARAQE 63

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 41.4 bits (97), Expect = 7e-05
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 69   SSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREE 127
             + + +    P  + +ITG   G G  LA+     G   +++ SRS  R     +    E
Sbjct: 1873 LTGLSKTFCPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQAR-QVRE 1931

Query: 128  FGEQ--HVWGTKCDVSEGNEVADLVA 151
            +  Q   V  +  + S  +    L+ 
Sbjct: 1932 WRRQGVQVLVSTSNASSLDGARSLIT 1957

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 17/94 (18%), Positives = 39/94 (41%), Gaps = 14/94 (14%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC------------SRSAERVDSAVQSLREEFGE 130
           VL+TG  +G G + A +  + G ++I+               ++  ++ A   + +   +
Sbjct: 13  VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRK 72

Query: 131 QHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWV 164
              +  + DV +   V+  +A A      +D+ V
Sbjct: 73  --AYTAEVDVRDRAAVSRELANAVAEFGKLDVVV 104

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 79  PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQ--HVWG 135
           P   VL+TG T G+G  +A+   + G  ++++ SRS    D A + L  E          
Sbjct: 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGE-LVAELEALGARTTV 283

Query: 136 TKCDVSEGNEVADLVA 151
             CDV++   V +L+ 
Sbjct: 284 AACDVTDRESVRELLG 299

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQ--HVWGTKCD 139
           VL+TG T GIG  +A+   + G  ++++ SR       A + LR E  +    V    CD
Sbjct: 242 VLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAE-LRAELEQLGVRVTIAACD 300

Query: 140 VSEGNEVADLVA 151
            ++   +A L+A
Sbjct: 301 AADREALAALLA 312

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 8/70 (11%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            + I G+T   G     + ++AG  V +  R + R+           G +       DV 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP--------SEGPRPAHVVVGDVL 56

Query: 142 EGNEVADLVA 151
           +  +V   VA
Sbjct: 57  QAADVDKTVA 66

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119
            + I GST  +G +L K        +   +R  E+V  
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ 39

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 79  PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQ--HVWG 135
           P   VLITG    IG  LA+     G + +++ SR       A   L EE       V  
Sbjct: 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGA-AELAEELRGHGCEVVH 316

Query: 136 TKCDVSEGNEVADLVA 151
             CDV+E + +A LV 
Sbjct: 317 AACDVAERDALAALVT 332

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 38.1 bits (88), Expect = 6e-04
 Identities = 8/40 (20%), Positives = 17/40 (42%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
            + + G+T   G A+  E  + G  V+   R  ++    +
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL 41

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 9/70 (12%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            +++ G++  +G AL  E L  G  V    R  E++    + L        V   K DVS
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHL-------KVK--KADVS 56

Query: 142 EGNEVADLVA 151
             +EV ++  
Sbjct: 57  SLDEVCEVCK 66

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Length = 245

 Score = 38.1 bits (88), Expect = 7e-04
 Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 3/68 (4%)

Query: 86  TGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNE 145
           TG+   +G  +A      G  V I +R  +   +  +           W  +        
Sbjct: 27  TGT---VGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAA 83

Query: 146 VADLVAFA 153
            AD+ A A
Sbjct: 84  FADVAAGA 91

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 37.6 bits (88), Expect = 9e-04
 Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 3/85 (3%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
             +I G  + + I + +AK   + G  ++   R  ER    ++ L E+  +      + D
Sbjct: 34  TYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRK-ERSRKELEKLLEQLNQPEAHLYQID 92

Query: 140 VSEGNEVADLVAFAQKNLKYVDIWV 164
           V    EV +      K++  +D   
Sbjct: 93  VQSDEEVINGFEQIGKDVGNIDGVY 117

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	173
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.9
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.9
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.88
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.87
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.87
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.86
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.85
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.85
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.85
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.85
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.85
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.85
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.84
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.84
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.84
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.84
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.84
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.84
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.84
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.84
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.84
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.84
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.84
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.84
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.84
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.83
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.83
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.83
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.83
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.83
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.83
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.83
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.83
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.83
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.83
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.83
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.83
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.83
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.83
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.83
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.83
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.83
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.83
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.83
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.83
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.83
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.82
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.82
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.82
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.82
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.82
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.82
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.82
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.82
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.82
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.82
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.82
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.82
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.82
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.82
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.82
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.82
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.82
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.82
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.82
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.82
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.82
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.82
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.82
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.82
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.82
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.81
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.81
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.81
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.81
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.81
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.81
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.81
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.81
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.81
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.81
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.81
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.81
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.81
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.81
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.81
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.81
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.81
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.81
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.81
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.81
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.81
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.81
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.81
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.8
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.8
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.8
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.8
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.8
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.8
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.8
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.8
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.8
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.8
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.8
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.8
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.8
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.8
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.8
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.8
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.8
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.79
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.79
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.79
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.79
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.79
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.79
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.79
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.79
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.79
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.79
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.79
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.79
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.79
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.79
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.79
1spx_A	278	Short-chain reductase family member (5L265); paral	99.79
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.78
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.78
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.78
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.78
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.78
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.78
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.78
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.78
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.78
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.78
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.78
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.78
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.78
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.78
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.78
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.78
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.77
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.77
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.77
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.77
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.77
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.77
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.77
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.77
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.77
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.77
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.77
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.77
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.77
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.77
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.77
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.77
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.76
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.76
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.76
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.76
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.76
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.76
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.76
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.76
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.76
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.76
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.75
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.75
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.74
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.74
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.73
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.73
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.73
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.73
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.73
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.73
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.72
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.71
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.71
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.71
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.71
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.71
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.7
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.7
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.69
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.69
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.69
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.69
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.69
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.68
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.68
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.67
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.67
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.67
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.66
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.66
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.65
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.64
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.63
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.63
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.63
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.63
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.62
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.62
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.61
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.61
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.61
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.6
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.6
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.6
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.59
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.58
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.58
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.57
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.55
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.55
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.55
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.55
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.55
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.52
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.52
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.51
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.51
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.5
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.49
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.48
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.47
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.47
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.46
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.46
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.44
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.43
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.42
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.41
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.4
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.4
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.4
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.39
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.39
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.39
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.38
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.38
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.37
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.37
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.36
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.36
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.36
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.36
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.35
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.35
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.35
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.34
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.33
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.33
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.33
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.33
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.31
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.31
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.31
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.31
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.3
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.3
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.3
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.28
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.26
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.26
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.25
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.25
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.25
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.24
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.24
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.24
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.24
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.22
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.22
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.22
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.22
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.22
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.2
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.2
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.19
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.18
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.17
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.16
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.15
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.15
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.14
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.14
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.14
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.14
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.14
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.12
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.12
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.11
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.1
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.09
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.08
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.08
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.07
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.07
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.06
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	99.06
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.05
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	99.05
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.04
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.04
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.03
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.03
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.01
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.99
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.98
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.95
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.91
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.89
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.86
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.85
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.85
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.85
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.81
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.67
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.66
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.65
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.63
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.6
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.59
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.57
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.57
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.57
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.56
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.54
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.53
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.52
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.52
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.51
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.5
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.46
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.42
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.41
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.4
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.38
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.35
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.31
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.28
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.26
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.23
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.22
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.22
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.21
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.17
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.15
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.13
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.13
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.11
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.1
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.08
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.08
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.06
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.05
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.03
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.99
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.97
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.96
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.96
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.95
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.94
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.93
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.9
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.89
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.84
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.84
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.82
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.79
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.78
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.77
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.76
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.7
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.68
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.68
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.64
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.64
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.62
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.62
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.61
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.59
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.57
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.57
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.57
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.56
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.53
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.51
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.5
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.5
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.47
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.45
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.45
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.45
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.43
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.42
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.42
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.42
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.38
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.37
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.37
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.37
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.35
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.35
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.34
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.33
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.32
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.32
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.27
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.25
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.24
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.24
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.22
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.2
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.19
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	97.19
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	97.17
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.16
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.16
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.14
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.07
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.07
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.04
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.02
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	97.01
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.97
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.96
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.96
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.93
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.93
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.93
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.91
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.89
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.86
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.84
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.84
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.82
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.75
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.74
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.74
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.67
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.65
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.64
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.59
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.58
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.54
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.51
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.48
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.46
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.46
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.45
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.45
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.44
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.39
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.39
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.38
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.38
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.36
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.35
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.35
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.34
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.27
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.26
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.24
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.17
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.16
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.16
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.15
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.14
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.14
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.13
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.13
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.1
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	96.09
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.08
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.06
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.06
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.01
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.0
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.97
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.95
1lnq_A	336	MTHK channels, potassium channel related protein;	95.94
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.93
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.93
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.89
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	95.88
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.88
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.87
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.77
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.75
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.73
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.72
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.69
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.69

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.90  E-value=1.5e-23  Score=161.64  Aligned_cols=93  Identities=28%  Similarity=0.372  Sum_probs=87.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++...+.  ++.++++|++|+++++++++++.++
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK--EVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999876544  5899999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ||+||+||||||+..
T Consensus        82 ~G~iDiLVNNAGi~~   96 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMD   96 (254)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCcccC
Confidence            999999999999864

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.90  E-value=2.7e-23  Score=160.36  Aligned_cols=95  Identities=23%  Similarity=0.281  Sum_probs=88.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.++||++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.+.+.  ++.++++|++|+++++++++++.+
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY--DAHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC--CEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999988887644  588999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+...
T Consensus        83 ~~G~iDiLVNNAG~~~~   99 (255)
T 4g81_D           83 EGIHVDILINNAGIQYR   99 (255)
T ss_dssp             TTCCCCEEEECCCCCCC
T ss_pred             HCCCCcEEEECCCCCCC
Confidence            99999999999998764

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.88  E-value=4.5e-22  Score=154.90  Aligned_cols=91  Identities=27%  Similarity=0.373  Sum_probs=82.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++    +. ++.++++|++|+++++++++++.++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~----g~-~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GG-GAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CC-CeEEEEecCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999998887776665    32 5788899999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      ||+||+||||||+...
T Consensus       101 ~G~iDiLVNNAG~~~~  116 (273)
T 4fgs_A          101 AGRIDVLFVNAGGGSM  116 (273)
T ss_dssp             HSCEEEEEECCCCCCC
T ss_pred             cCCCCEEEECCCCCCC
Confidence            9999999999998653

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.87  E-value=8.9e-22  Score=152.17  Aligned_cols=95  Identities=17%  Similarity=0.183  Sum_probs=82.8

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.++||++|||||++|||+++++.|+++|++|++++|+.+..+ ..+++.+..+  ++.++.+|++|+++++++++++.
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~v~~~~   78 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQP--RATYLPVELQDDAQCRDAVAQTI   78 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCT--TCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCC--CEEEEEeecCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999877643 3445555443  58889999999999999999999


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                      ++||+||+||||||+...
T Consensus        79 ~~~G~iDiLVNnAGi~~~   96 (258)
T 4gkb_A           79 ATFGRLDGLVNNAGVNDG   96 (258)
T ss_dssp             HHHSCCCEEEECCCCCCC
T ss_pred             HHhCCCCEEEECCCCCCC
Confidence            999999999999998653

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.87  E-value=1e-21  Score=151.54  Aligned_cols=95  Identities=16%  Similarity=0.130  Sum_probs=85.3

Q ss_pred             CCCCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        76 ~~~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +.++||++|||||+|  |||+++|+.|+++|++|++++|+++..++..+.+.+..+ .++.++++|++|+++++++++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHHH
Confidence            458999999999875  999999999999999999999999888887777766544 36889999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+++|+||+||||||+..
T Consensus        81 ~~~~G~iD~lvnnAg~~~   98 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFAN   98 (256)
T ss_dssp             HHHHCCCSEEEECCCCCC
T ss_pred             HHHhCCCCEEEecccccc
Confidence            999999999999999864

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.86  E-value=1.9e-20  Score=145.64  Aligned_cols=96  Identities=28%  Similarity=0.350  Sum_probs=87.2

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..++++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++....+. ++.++.+|++|+++++++++++.
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGR-RCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999998888888887665554 69999999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +++|++|+||||||+..
T Consensus       101 ~~~g~id~lv~nAg~~~  117 (277)
T 4fc7_A          101 KEFGRIDILINCAAGNF  117 (277)
T ss_dssp             HHHSCCCEEEECCCCCC
T ss_pred             HHcCCCCEEEECCcCCC
Confidence            99999999999999764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.85  E-value=1.3e-20  Score=145.76  Aligned_cols=96  Identities=27%  Similarity=0.444  Sum_probs=87.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++....+..++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888888887755554689999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        84 ~~g~id~lvnnAg~~~   99 (265)
T 3lf2_A           84 TLGCASILVNNAGQGR   99 (265)
T ss_dssp             HHCSCSEEEECCCCCC
T ss_pred             HcCCCCEEEECCCCCC
Confidence            9999999999999864

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.85  E-value=1e-20  Score=146.53  Aligned_cols=93  Identities=25%  Similarity=0.396  Sum_probs=85.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      |+.+|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.....  ++.++.+|++|+++++++++++.+.
T Consensus         1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~   78 (264)
T 3tfo_A            1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG--TALAQVLDVTDRHSVAAFAQAAVDT   78 (264)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57799999999999999999999999999999999999888888888876533  6889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        79 ~g~iD~lVnnAG~~~   93 (264)
T 3tfo_A           79 WGRIDVLVNNAGVMP   93 (264)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.85  E-value=1.1e-20  Score=147.09  Aligned_cols=96  Identities=24%  Similarity=0.354  Sum_probs=87.1

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~  104 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG--KALPIRCDVTQPDQVRGMLDQMT  104 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHH
Confidence            3458899999999999999999999999999999999999888888888866433  58889999999999999999999


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                      +++|++|+||||||+...
T Consensus       105 ~~~g~iD~lvnnAg~~~~  122 (276)
T 3r1i_A          105 GELGGIDIAVCNAGIVSV  122 (276)
T ss_dssp             HHHSCCSEEEECCCCCCC
T ss_pred             HHcCCCCEEEECCCCCCC
Confidence            999999999999998753

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.85  E-value=1.4e-20  Score=145.31  Aligned_cols=95  Identities=29%  Similarity=0.398  Sum_probs=86.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++..... .++.++.+|++|+++++++++++.+
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQTDVSDRAQCDALAGRAVE   84 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS-SCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999999988888888876542 3689999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      ++|++|+||||||+..
T Consensus        85 ~~g~id~lvnnAg~~~  100 (262)
T 3pk0_A           85 EFGGIDVVCANAGVFP  100 (262)
T ss_dssp             HHSCCSEEEECCCCCC
T ss_pred             HhCCCCEEEECCCCCC
Confidence            9999999999999865

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.85  E-value=1.1e-20  Score=146.16  Aligned_cols=96  Identities=30%  Similarity=0.453  Sum_probs=87.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++....+. ++.++.+|++|+++++++++++.+
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999998888888888764444 699999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      .+|++|+||||||+..+
T Consensus        95 ~~g~id~lv~nAg~~~~  111 (266)
T 4egf_A           95 AFGGLDVLVNNAGISHP  111 (266)
T ss_dssp             HHTSCSEEEEECCCCCC
T ss_pred             HcCCCCEEEECCCcCCC
Confidence            99999999999998753

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.85  E-value=2.1e-20  Score=143.92  Aligned_cols=95  Identities=22%  Similarity=0.366  Sum_probs=86.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG--KAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999999888888888766433  689999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      .+|++|+||||||+...
T Consensus        86 ~~g~id~lv~nAg~~~~  102 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGGP  102 (256)
T ss_dssp             HHSCCCEEEECCCCCCC
T ss_pred             HcCCCCEEEECCCCCCC
Confidence            99999999999998753

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.84  E-value=8.1e-21  Score=145.88  Aligned_cols=87  Identities=25%  Similarity=0.368  Sum_probs=77.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|++|||||++|||+++|+.|+++|++|++++|+++..++..    +..+  ++.++++|++|+++++++++++.+++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~~~--~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KERP--NLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TTCT--TEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhcC--CEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            589999999999999999999999999999999977655433    3223  5888999999999999999999999999


Q ss_pred             ccEEEEcccCCCC
Q 030706          160 VDIWVFMSDLHSS  172 (173)
Q Consensus       160 id~lVn~AG~~~~  172 (173)
                      ||+||||||+...
T Consensus        76 iDiLVNNAG~~~~   88 (247)
T 3ged_A           76 IDVLVNNACRGSK   88 (247)
T ss_dssp             CCEEEECCCCCCC
T ss_pred             CCEEEECCCCCCC
Confidence            9999999998754

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=1.7e-20  Score=144.01  Aligned_cols=96  Identities=18%  Similarity=0.225  Sum_probs=86.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCC-ceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++...... .++.++.+|++|.++++++++++.+
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999999888888888765322 4688999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      .+|++|+||||||+...
T Consensus        84 ~~g~iD~lvnnAg~~~~  100 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMD  100 (250)
T ss_dssp             HHCCEEEEEECCCCCCC
T ss_pred             hcCCCCEEEECCCcCCC
Confidence            99999999999998643

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.84  E-value=1.8e-20  Score=146.00  Aligned_cols=97  Identities=32%  Similarity=0.447  Sum_probs=82.6

Q ss_pred             CCCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        73 ~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      ....|+.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.....  ++.++.+|++|++++++++++
T Consensus        17 ~~~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~   94 (279)
T 3sju_A           17 RGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH--DVDGSSCDVTSTDEVHAAVAA   94 (279)
T ss_dssp             --------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHH
T ss_pred             CcccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHH
Confidence            334568899999999999999999999999999999999999888888888866533  588999999999999999999


Q ss_pred             HHHhcCCccEEEEcccCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~  171 (173)
                      +.+.+|++|+||||||+..
T Consensus        95 ~~~~~g~id~lv~nAg~~~  113 (279)
T 3sju_A           95 AVERFGPIGILVNSAGRNG  113 (279)
T ss_dssp             HHHHHCSCCEEEECCCCCC
T ss_pred             HHHHcCCCcEEEECCCCCC
Confidence            9999999999999999875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.84  E-value=1.6e-20  Score=147.55  Aligned_cols=97  Identities=30%  Similarity=0.377  Sum_probs=87.2

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++..... .++.++.+|++|+++++++++++.
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999988888888765432 368999999999999999999999


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                      +.+|++|+||||||+...
T Consensus       115 ~~~g~iD~lvnnAg~~~~  132 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPE  132 (293)
T ss_dssp             HHHSCCCEEEECCCCCCC
T ss_pred             HHcCCCCEEEECCCCCCC
Confidence            999999999999998753

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.84  E-value=3.3e-20  Score=143.37  Aligned_cols=93  Identities=20%  Similarity=0.322  Sum_probs=85.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.....  ++.++.+|++|+++++++++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR--RALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999999888888888876533  689999999999999999999999


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                      .+|++|+||||||+.
T Consensus        85 ~~g~id~lv~nAg~~   99 (264)
T 3ucx_A           85 AYGRVDVVINNAFRV   99 (264)
T ss_dssp             HTSCCSEEEECCCSC
T ss_pred             HcCCCcEEEECCCCC
Confidence            999999999999985

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.84  E-value=5e-20  Score=142.69  Aligned_cols=98  Identities=29%  Similarity=0.462  Sum_probs=84.6

Q ss_pred             CCCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        73 ~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .+...+.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++....+. ++.++.+|++|++++++++++
T Consensus        14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHH
Confidence            3445588999999999999999999999999999999999988877777776333343 588899999999999999999


Q ss_pred             HHHhcCCccEEEEcccCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~  171 (173)
                      +.+.+|++|+||||||+..
T Consensus        93 ~~~~~g~iD~lvnnAg~~~  111 (267)
T 1vl8_A           93 VKEKFGKLDTVVNAAGINR  111 (267)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHHcCCCCEEEECCCcCC
Confidence            9999999999999999864

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.84  E-value=3.2e-20  Score=144.07  Aligned_cols=95  Identities=20%  Similarity=0.283  Sum_probs=86.0

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ...+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.....  ++.++.+|++|.++++++++++.
T Consensus        23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~  100 (270)
T 3ftp_A           23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL--EGRGAVLNVNDATAVDALVESTL  100 (270)
T ss_dssp             CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEEeCCCHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999888888888776543  57888999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus       101 ~~~g~iD~lvnnAg~~~  117 (270)
T 3ftp_A          101 KEFGALNVLVNNAGITQ  117 (270)
T ss_dssp             HHHSCCCEEEECCCCCC
T ss_pred             HHcCCCCEEEECCCCCC
Confidence            99999999999999865

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.84  E-value=4.1e-20  Score=142.05  Aligned_cols=93  Identities=19%  Similarity=0.277  Sum_probs=84.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.....  ++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG--RIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEECcCCCHHHHHHHHHHHHhh
Confidence            47899999999999999999999999999999999999999888888876533  6999999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                       |++|+||||||+...
T Consensus        82 -g~id~lv~nAg~~~~   96 (252)
T 3h7a_A           82 -APLEVTIFNVGANVN   96 (252)
T ss_dssp             -SCEEEEEECCCCCCC
T ss_pred             -CCceEEEECCCcCCC
Confidence             999999999998653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.84  E-value=5.4e-20  Score=144.62  Aligned_cols=96  Identities=18%  Similarity=0.224  Sum_probs=83.9

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      ...+++|++|||||++|||+++++.|+++|++|++++|+            .+.+++..+++.....  ++.++.+|++|
T Consensus        23 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~  100 (299)
T 3t7c_A           23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR--RIIASQVDVRD  100 (299)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTC
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC--ceEEEECCCCC
Confidence            345889999999999999999999999999999999987            5566666666655433  68999999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcccCCCC
Q 030706          143 GNEVADLVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       143 ~~~v~~~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      +++++++++++.+.+|+||+||||||+...
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~  130 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALASE  130 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            999999999999999999999999998653

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.84  E-value=3.2e-20  Score=145.04  Aligned_cols=94  Identities=23%  Similarity=0.234  Sum_probs=83.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++....+  ++.++.+|++|+++++++++++.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG--QAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999888888877765433  688999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus       102 ~~g~iD~lVnnAg~~~  117 (283)
T 3v8b_A          102 KFGHLDIVVANAGING  117 (283)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HhCCCCEEEECCCCCC
Confidence            9999999999999864

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.84  E-value=3e-20  Score=145.03  Aligned_cols=94  Identities=24%  Similarity=0.363  Sum_probs=83.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++....+. .+.++.+|++|+++++++++++.+.
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN-IVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888888888766554 4688999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus       109 ~g~iD~lvnnAG~~~  123 (281)
T 4dry_A          109 FARLDLLVNNAGSNV  123 (281)
T ss_dssp             HSCCSEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.84  E-value=4.4e-20  Score=143.21  Aligned_cols=95  Identities=29%  Similarity=0.374  Sum_probs=83.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +.+++|++|||||++|||+++++.|+++|++|+++++ +.+..++..+++.....  ++.++.+|++|+++++++++++.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG--EAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999998 55666666666665433  68899999999999999999999


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                      +.+|++|+||||||+...
T Consensus       102 ~~~g~id~lv~nAg~~~~  119 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGITRD  119 (269)
T ss_dssp             HHHSCCCEEEECCCCCCC
T ss_pred             HHcCCCCEEEECCCCCCC
Confidence            999999999999998753

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.84  E-value=1.6e-19  Score=141.45  Aligned_cols=96  Identities=27%  Similarity=0.288  Sum_probs=81.6

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ...+++|++|||||++|||++++++|+++|++|++++|+.+...+...+.....+. ++.++.+|++|+++++++++++.
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~  120 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSDEQHCKDIVQETV  120 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999876544433333333333 68999999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +++|++|+||||||+..
T Consensus       121 ~~~g~iD~lvnnAg~~~  137 (291)
T 3ijr_A          121 RQLGSLNILVNNVAQQY  137 (291)
T ss_dssp             HHHSSCCEEEECCCCCC
T ss_pred             HHcCCCCEEEECCCCcC
Confidence            99999999999999864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.83  E-value=2.7e-20  Score=143.34  Aligned_cols=93  Identities=22%  Similarity=0.399  Sum_probs=84.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG--QILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999888887777754322  6889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        81 ~g~id~lv~nAg~~~   95 (257)
T 3imf_A           81 FGRIDILINNAAGNF   95 (257)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999764

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.83  E-value=6.1e-20  Score=141.88  Aligned_cols=95  Identities=22%  Similarity=0.295  Sum_probs=84.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.......++.++.+|++|+++++++++++.+.
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999998888777777765432336889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        90 ~g~id~lv~nAg~~~  104 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEG  104 (267)
T ss_dssp             HSCCSEEEECCCCCC
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.83  E-value=7.4e-20  Score=142.12  Aligned_cols=95  Identities=19%  Similarity=0.251  Sum_probs=83.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHHHHHHHHHhCCceEEEEEeeCCCH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVWGTKCDVSEG  143 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~  143 (173)
                      ..+.+|++|||||++|||+++++.|+++|++|++++|+            .+..++..+++.....  ++.++.+|++|+
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~   86 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS--RIVARQADVRDR   86 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC--CEEEEECCTTCH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC--eEEEEeCCCCCH
Confidence            34789999999999999999999999999999999987            5556666666655433  689999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcccCCCC
Q 030706          144 NEVADLVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       144 ~~v~~~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      ++++++++++.+.+|++|+||||||+...
T Consensus        87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~  115 (278)
T 3sx2_A           87 ESLSAALQAGLDELGRLDIVVANAGIAPM  115 (278)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            99999999999999999999999998753

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.83  E-value=8.2e-20  Score=140.22  Aligned_cols=94  Identities=22%  Similarity=0.305  Sum_probs=86.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC--CCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV--SEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv--~~~~~v~~~~~~~~  154 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++....+. ++.++.+|+  +|.++++++++++.
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSC-CCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-CceEEEEecccCCHHHHHHHHHHHH
Confidence            488999999999999999999999999999999999999888888888776553 578889999  99999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus        88 ~~~g~id~lv~nAg~~~  104 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLG  104 (252)
T ss_dssp             HHCSCCSEEEECCCCCC
T ss_pred             HhCCCCCEEEECCccCC
Confidence            99999999999999853

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.83  E-value=5.7e-20  Score=143.11  Aligned_cols=96  Identities=22%  Similarity=0.241  Sum_probs=85.3

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .+.+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..... ..++.++.+|++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999888888888876433 126889999999999999999999


Q ss_pred             HHhcCCccEEEEcccCC
Q 030706          154 QKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~  170 (173)
                      .+.+|++|+||||||+.
T Consensus        86 ~~~~g~id~lv~nAg~~  102 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGS  102 (281)
T ss_dssp             HHHHSCCCEEEECCCCC
T ss_pred             HHHcCCCCEEEECCCcC
Confidence            99999999999999983

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.83  E-value=7.9e-20  Score=141.02  Aligned_cols=97  Identities=24%  Similarity=0.301  Sum_probs=86.9

Q ss_pred             CCCCCCCEEEEEcCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        75 ~~~~~~k~~lItGa~-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ...+++|++|||||+ +|||++++++|+++|++|++++|+.+..++..+++....+ .++.++.+|++|+++++++++++
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~   95 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGL-GRVEAVVCDVTSTEAVDALITQT   95 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCS-SCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC-CceEEEEeCCCCHHHHHHHHHHH
Confidence            345889999999998 5999999999999999999999999888888888866543 37999999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCCC
Q 030706          154 QKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~~  172 (173)
                      .+.+|++|+||||||+...
T Consensus        96 ~~~~g~id~li~~Ag~~~~  114 (266)
T 3o38_A           96 VEKAGRLDVLVNNAGLGGQ  114 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCC
T ss_pred             HHHhCCCcEEEECCCcCCC
Confidence            9999999999999998653

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.83  E-value=4.5e-20  Score=143.06  Aligned_cols=98  Identities=23%  Similarity=0.291  Sum_probs=79.3

Q ss_pred             CCCCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHH
Q 030706           72 VKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLV  150 (173)
Q Consensus        72 ~~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~  150 (173)
                      ..+.+++++|++|||||++|||++++++|+++|++|++++ ++.+..++..+++.....  ++.++.+|++|++++++++
T Consensus        19 ~~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~   96 (267)
T 3u5t_A           19 YFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG--KALTAQADVSDPAAVRRLF   96 (267)
T ss_dssp             --------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHH
T ss_pred             cccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHH
Confidence            3444667899999999999999999999999999999885 455666666666655433  6889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccCCC
Q 030706          151 AFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       151 ~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++.+.+|++|+||||||+..
T Consensus        97 ~~~~~~~g~iD~lvnnAG~~~  117 (267)
T 3u5t_A           97 ATAEEAFGGVDVLVNNAGIMP  117 (267)
T ss_dssp             HHHHHHHSCEEEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999875

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.83  E-value=3e-20  Score=144.29  Aligned_cols=94  Identities=27%  Similarity=0.304  Sum_probs=86.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+.||++|||||++|||+++++.|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.+
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH--DAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC--CEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999999988888888866433  588999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus       100 ~~g~iD~lv~nAg~~~  115 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQF  115 (271)
T ss_dssp             HTCCCCEEEECCCCCC
T ss_pred             HCCCCCEEEECCCCCC
Confidence            9999999999999864

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.83  E-value=8.7e-20  Score=142.34  Aligned_cols=94  Identities=16%  Similarity=0.240  Sum_probs=81.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC----------------hhhHHHHHHHHHHHhCCceEEEEEee
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----------------AERVDSAVQSLREEFGEQHVWGTKCD  139 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~~D  139 (173)
                      ..+++|++|||||++|||+++++.|+++|++|++++|+                .+.+++..+++....  .++.++.+|
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D   84 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN--RRIVTAEVD   84 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT--CCEEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC--CceEEEEcC
Confidence            34789999999999999999999999999999999987                455556555555432  368999999


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          140 VSEGNEVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       140 v~~~~~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++|+++++++++++.+.+|++|+||||||+..
T Consensus        85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~  116 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGN  116 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccC
Confidence            99999999999999999999999999999865

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.83  E-value=9.2e-20  Score=141.67  Aligned_cols=95  Identities=19%  Similarity=0.240  Sum_probs=82.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-------------ChhhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-------------SAERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      ..+.+|++|||||++|||+++++.|+++|++|++++|             +.+..++..+++....  .++.++.+|++|
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~   84 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRD   84 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCC
Confidence            3478999999999999999999999999999999998             5556666666665443  268999999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcccCCCC
Q 030706          143 GNEVADLVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       143 ~~~v~~~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      +++++++++++.+.+|++|+||||||+...
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~  114 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVAAP  114 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            999999999999999999999999998754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.83  E-value=1.3e-19  Score=141.14  Aligned_cols=94  Identities=18%  Similarity=0.265  Sum_probs=82.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~  144 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+            .+..++...++....  .++.++.+|++|++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRA   84 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHH
Confidence            4789999999999999999999999999999999987            555556555555432  36899999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCCCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      +++++++++.+.+|++|+||||||+...
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~  112 (287)
T 3pxx_A           85 AVSRELANAVAEFGKLDVVVANAGICPL  112 (287)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCcc
Confidence            9999999999999999999999998653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.83  E-value=1e-19  Score=138.87  Aligned_cols=94  Identities=20%  Similarity=0.283  Sum_probs=85.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF--KARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999888888777766533  5889999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|++|+||||||+...
T Consensus        80 ~~~id~li~~Ag~~~~   95 (247)
T 3lyl_A           80 NLAIDILVNNAGITRD   95 (247)
T ss_dssp             TCCCSEEEECCCCCCC
T ss_pred             cCCCCEEEECCCCCCC
Confidence            9999999999998753

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.83  E-value=4.2e-20  Score=144.77  Aligned_cols=95  Identities=23%  Similarity=0.370  Sum_probs=84.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~  154 (173)
                      .++.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++....+. ++.++.+|++|. ++++++++++.
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-NVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC-SEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEccCCCcHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999999888888888766543 699999999998 99999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus        87 ~~~g~iD~lv~nAg~~~  103 (311)
T 3o26_A           87 THFGKLDILVNNAGVAG  103 (311)
T ss_dssp             HHHSSCCEEEECCCCCS
T ss_pred             HhCCCCCEEEECCcccc
Confidence            99999999999999864

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.83  E-value=9.4e-20  Score=141.83  Aligned_cols=94  Identities=22%  Similarity=0.320  Sum_probs=83.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-------------ChhhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-------------SAERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      ..+++|++|||||++|||+++++.|+++|++|++++|             +.+.+++..+++....  .++.++.+|++|
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~   88 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRD   88 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCC
Confidence            3478999999999999999999999999999999998             5666666666665543  268899999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          143 GNEVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       143 ~~~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++++++++++.+.+|++|+||||||+..
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~  117 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLS  117 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            99999999999999999999999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.83  E-value=8.6e-20  Score=139.87  Aligned_cols=92  Identities=22%  Similarity=0.272  Sum_probs=82.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++..     ++.++.+|++|+++++++++++.+
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-----NGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----cceEEEEeCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999998877776665532     467889999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|++|+||||||+...
T Consensus        80 ~~g~iD~lv~nAg~~~~   96 (248)
T 3op4_A           80 EFGGVDILVNNAGITRD   96 (248)
T ss_dssp             HHCCCSEEEECCCCCCC
T ss_pred             HcCCCCEEEECCCCCCC
Confidence            99999999999998753

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.83  E-value=1.2e-19  Score=142.87  Aligned_cols=92  Identities=26%  Similarity=0.357  Sum_probs=85.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.....  ++.++.+|++|.++++++++++.+.+
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF--DAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            7899999999999999999999999999999999999988888888876533  58999999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus       107 g~id~lvnnAg~~~  120 (301)
T 3tjr_A          107 GGVDVVFSNAGIVV  120 (301)
T ss_dssp             SSCSEEEECCCCCC
T ss_pred             CCCCEEEECCCcCC
Confidence            99999999999864

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.83  E-value=6.4e-20  Score=139.04  Aligned_cols=93  Identities=26%  Similarity=0.361  Sum_probs=83.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++|++|||||++|||++++++|+++|++|++++|+.+..++..+++....+. ++.++.+|++|+++++++++++.+.+|
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV-EVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-eEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999999999999999888888888755454 699999999999999999999999999


Q ss_pred             CccEEEEcccCCCC
Q 030706          159 YVDIWVFMSDLHSS  172 (173)
Q Consensus       159 ~id~lVn~AG~~~~  172 (173)
                      ++|+||||||+...
T Consensus        80 ~id~li~~Ag~~~~   93 (235)
T 3l77_A           80 DVDVVVANAGLGYF   93 (235)
T ss_dssp             SCSEEEECCCCCCC
T ss_pred             CCCEEEECCccccc
Confidence            99999999998653

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.83  E-value=7.3e-20  Score=141.10  Aligned_cols=93  Identities=20%  Similarity=0.281  Sum_probs=82.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      |.++|++|||||++|||++++++|+++|++|+++ +|+.+..++..+++.....  ++.++.+|++|+++++++++++.+
T Consensus         1 M~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~   78 (258)
T 3oid_A            1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV--KVLVVKANVGQPAKIKEMFQQIDE   78 (258)
T ss_dssp             --CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999987 8888888887777765433  689999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        79 ~~g~id~lv~nAg~~~   94 (258)
T 3oid_A           79 TFGRLDVFVNNAASGV   94 (258)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HcCCCCEEEECCCCCC
Confidence            9999999999999754

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.83  E-value=1.5e-19  Score=139.34  Aligned_cols=94  Identities=31%  Similarity=0.462  Sum_probs=84.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++....+. ++.++.+|++|+++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            477999999999999999999999999999999999988877777777654333 6889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        83 ~g~id~lv~~Ag~~~   97 (263)
T 3ai3_A           83 FGGADILVNNAGTGS   97 (263)
T ss_dssp             HSSCSEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.83  E-value=1.4e-19  Score=138.55  Aligned_cols=92  Identities=28%  Similarity=0.304  Sum_probs=83.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.....  ++.++.+|++|+++++++++++.+.+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA--KVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            6789999999999999999999999999999999998888877777765422  58889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        83 g~id~lv~nAg~~~   96 (247)
T 2jah_A           83 GGLDILVNNAGIML   96 (247)
T ss_dssp             SCCSEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.83  E-value=9.1e-20  Score=139.61  Aligned_cols=93  Identities=19%  Similarity=0.266  Sum_probs=85.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.+
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG--TAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHH
Confidence            447899999999999999999999999999999999999888888888765433  688999999999999999999999


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                      .+|++|+||||||+.
T Consensus        83 ~~g~id~li~~Ag~~   97 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIF   97 (253)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HcCCCCEEEECCCcC
Confidence            999999999999984

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.82  E-value=1.2e-19  Score=138.86  Aligned_cols=93  Identities=20%  Similarity=0.367  Sum_probs=82.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      |+.+|++|||||++|||++++++|+++|++|+++++ +.+..++..+++.....  ++.++.+|++|+++++++++++.+
T Consensus         1 Ml~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~   78 (246)
T 3osu_A            1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV--DSFAIQANVADADEVKAMIKEVVS   78 (246)
T ss_dssp             CCCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999887 45666777777665433  588999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        79 ~~g~id~lv~nAg~~~   94 (246)
T 3osu_A           79 QFGSLDVLVNNAGITR   94 (246)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HcCCCCEEEECCCCCC
Confidence            9999999999999875

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.82  E-value=1.6e-19  Score=140.49  Aligned_cols=93  Identities=25%  Similarity=0.391  Sum_probs=81.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~  144 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+            .+..++..+++....  .++.++.+|++|++
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG--RRCISAKVDVKDRA   84 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC--CeEEEEeCCCCCHH
Confidence            4789999999999999999999999999999999997            444555555555433  26899999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++++++++.+.+|++|+||||||+..
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~  111 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGIST  111 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            999999999999999999999999865

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.82  E-value=1.5e-19  Score=143.52  Aligned_cols=95  Identities=20%  Similarity=0.295  Sum_probs=87.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++...+...++.++.+|++|+++++++++++.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999999998888888877655446899999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        85 ~g~id~lv~nAg~~~   99 (319)
T 3ioy_A           85 FGPVSILCNNAGVNL   99 (319)
T ss_dssp             TCCEEEEEECCCCCC
T ss_pred             CCCCCEEEECCCcCC
Confidence            999999999999864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.82  E-value=1e-19  Score=140.99  Aligned_cols=91  Identities=24%  Similarity=0.383  Sum_probs=81.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++    +. ++.++.+|++|+++++++++++.+
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----GK-DVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CS-SEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceEEEEeecCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987776655443    33 689999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        98 ~~g~iD~lvnnAg~~~  113 (266)
T 3grp_A           98 EMEGIDILVNNAGITR  113 (266)
T ss_dssp             HHTSCCEEEECCCCC-
T ss_pred             HcCCCCEEEECCCCCC
Confidence            9999999999999864

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.82  E-value=1.2e-19  Score=141.62  Aligned_cols=95  Identities=24%  Similarity=0.373  Sum_probs=83.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..+.+|++|||||++|||++++++|+++|++|++++| +.+..++..+++....+ .++.++.+|++|+++++++++++.
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS-GTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCS-SCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccC-CcEEEEeCCCCCHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999 55666666666655433 368999999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus       100 ~~~g~iD~lv~nAg~~~  116 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQF  116 (281)
T ss_dssp             HHTSSCSEEEECCCCCC
T ss_pred             HHCCCCCEEEECCCCCC
Confidence            99999999999999864

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.82  E-value=1.4e-19  Score=140.56  Aligned_cols=94  Identities=30%  Similarity=0.404  Sum_probs=82.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-------HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------VDSAVQSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      +.+++|++|||||++|||+++++.|+++|++|++++|+.+.       +++..+++... + .++.++.+|++|++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-G-GQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH-T-SEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc-C-CeEEEEeCCCCCHHHHHH
Confidence            34789999999999999999999999999999999998653       45555555544 3 268999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccCCC
Q 030706          149 LVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       149 ~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++++.+.+|++|+||||||+..
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~  102 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIW  102 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCccc
Confidence            99999999999999999999864

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.82  E-value=9.8e-20  Score=139.48  Aligned_cols=90  Identities=29%  Similarity=0.372  Sum_probs=81.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++    +. ++.++.+|++|+++++++++++.+.
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GK-KARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CT-TEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999988777766655    32 5889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        78 ~g~id~lv~nAg~~~   92 (247)
T 3rwb_A           78 TGGIDILVNNASIVP   92 (247)
T ss_dssp             HSCCSEEEECCCCCC
T ss_pred             CCCCCEEEECCCCCC
Confidence            999999999999864

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.82  E-value=1e-19  Score=140.42  Aligned_cols=93  Identities=20%  Similarity=0.341  Sum_probs=84.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.....  ++.++.+|++|.++++++++++.+
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG--EAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC--ceeEEEecCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999999888888888765433  689999999999999999999999


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                      .+|++|+||||||+.
T Consensus       103 ~~g~id~lv~~Ag~~  117 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVG  117 (262)
T ss_dssp             HHSCCSEEEECCCCC
T ss_pred             hcCCCCEEEECCCcc
Confidence            999999999999983

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.82  E-value=3.2e-19  Score=138.77  Aligned_cols=93  Identities=30%  Similarity=0.411  Sum_probs=83.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.+.
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV--EADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999998888777777765432  5888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        97 ~g~iD~lv~~Ag~~~  111 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPG  111 (277)
T ss_dssp             TCSCSEEEECCCCCC
T ss_pred             hCCCCEEEECCCCCC
Confidence            999999999999864

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.82  E-value=2.3e-19  Score=138.14  Aligned_cols=94  Identities=26%  Similarity=0.457  Sum_probs=84.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++... + .++.++.+|++|+++++++++++.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~   82 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-G-FKVEASVCDLSSRSERQELMNTVAN   82 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999988887777777554 3 2688999999999999999999999


Q ss_pred             hc-CCccEEEEcccCCC
Q 030706          156 NL-KYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~-g~id~lVn~AG~~~  171 (173)
                      .+ |++|+||||||+..
T Consensus        83 ~~~g~id~lv~~Ag~~~   99 (260)
T 2ae2_A           83 HFHGKLNILVNNAGIVI   99 (260)
T ss_dssp             HTTTCCCEEEECCCCCC
T ss_pred             HcCCCCCEEEECCCCCC
Confidence            99 99999999999864

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.82  E-value=1.3e-19  Score=141.60  Aligned_cols=94  Identities=29%  Similarity=0.395  Sum_probs=82.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-------hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+       .+++..+++.....  ++.++.+|++|++++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG--QALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS--EEEEEECCTTSHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHH
Confidence            3478999999999999999999999999999999999876       45566666655433  69999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccCCC
Q 030706          149 LVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       149 ~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++++.+.+|++|+||||||+..
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~  105 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAIN  105 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC
Confidence            99999999999999999999875

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.82  E-value=1.2e-19  Score=138.06  Aligned_cols=89  Identities=19%  Similarity=0.259  Sum_probs=78.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.    . ++.++.+|++|+++++++++++.+.+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----N-AVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----G-GEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----C-CceEEECCCCCHHHHHHHHHHHHHhc
Confidence            357899999999999999999999999999999999888777666652    2 48899999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        76 g~id~lvnnAg~~~   89 (235)
T 3l6e_A           76 GLPELVLHCAGTGE   89 (235)
T ss_dssp             CSCSEEEEECCCC-
T ss_pred             CCCcEEEECCCCCC
Confidence            99999999999864

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.82  E-value=6.2e-20  Score=143.23  Aligned_cols=93  Identities=19%  Similarity=0.217  Sum_probs=84.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++....  .++.++.+|++|+++++++++++.+.
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG--GEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT--CCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999988888877775433  36889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        83 ~g~iD~lvnnAg~~~   97 (280)
T 3tox_A           83 FGGLDTAFNNAGALG   97 (280)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999863

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.82  E-value=1.3e-19  Score=139.52  Aligned_cols=94  Identities=26%  Similarity=0.397  Sum_probs=83.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.+. .++..+++....+. ++.++.+|++|+++++++++++.+
T Consensus         1 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   79 (260)
T 1x1t_A            1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999998877 77777776554233 588899999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        80 ~~g~iD~lv~~Ag~~~   95 (260)
T 1x1t_A           80 QMGRIDILVNNAGIQH   95 (260)
T ss_dssp             HHSCCSEEEECCCCCC
T ss_pred             hcCCCCEEEECCCCCC
Confidence            9999999999999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.82  E-value=2e-19  Score=137.49  Aligned_cols=92  Identities=24%  Similarity=0.394  Sum_probs=82.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++|+++||||++|||+++++.|+++|++|++++| +.+..++..+++.....  ++.++.+|++|+++++++++++.+.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS--DAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999 77777777777655422  5888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        80 ~g~id~lv~nAg~~~   94 (246)
T 2uvd_A           80 FGQVDILVNNAGVTK   94 (246)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.82  E-value=2e-19  Score=140.02  Aligned_cols=94  Identities=22%  Similarity=0.347  Sum_probs=82.3

Q ss_pred             CCCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        73 ~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .+.+.+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++    +. ++.++.+|++|++++++++++
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~d~~~v~~~~~~   94 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----GS-KAFGVRVDVSSAKDAESMVEK   94 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceEEEEecCCCHHHHHHHHHH
Confidence            3445688999999999999999999999999999999999987776665553    32 588999999999999999999


Q ss_pred             HHHhcCCccEEEEcccCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~  171 (173)
                      +.+.+|++|+||||||+..
T Consensus        95 ~~~~~g~iD~lv~nAg~~~  113 (277)
T 4dqx_A           95 TTAKWGRVDVLVNNAGFGT  113 (277)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHHcCCCCEEEECCCcCC
Confidence            9999999999999999864

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.82  E-value=2.2e-19  Score=141.05  Aligned_cols=96  Identities=19%  Similarity=0.295  Sum_probs=81.0

Q ss_pred             CCCCCCCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHH
Q 030706           73 KREPMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLV  150 (173)
Q Consensus        73 ~~~~~~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~  150 (173)
                      ...+.+++|++|||||+|  |||+++++.|+++|++|++++|+.+..+. .+++....+.  +.++.+|++|++++++++
T Consensus        23 ~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~   99 (296)
T 3k31_A           23 RTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKR-VDPLAESLGV--KLTVPCDVSDAESVDNMF   99 (296)
T ss_dssp             CCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHHTC--CEEEECCTTCHHHHHHHH
T ss_pred             cchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHHHhcCC--eEEEEcCCCCHHHHHHHH
Confidence            344558899999999997  99999999999999999999999754443 3334333443  678899999999999999


Q ss_pred             HHHHHhcCCccEEEEcccCCC
Q 030706          151 AFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       151 ~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++.+++|+||+||||||+..
T Consensus       100 ~~~~~~~g~iD~lVnnAG~~~  120 (296)
T 3k31_A          100 KVLAEEWGSLDFVVHAVAFSD  120 (296)
T ss_dssp             HHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcCC
Confidence            999999999999999999874

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.82  E-value=5.7e-19  Score=138.53  Aligned_cols=95  Identities=25%  Similarity=0.289  Sum_probs=80.6

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      ...+++|++|||||++|||+++++.|+++|++|++++++.  +..++..+.+... +. ++.++.+|++|++++++++++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC-GR-KAVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT-TC-CEEECCCCTTSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc-CC-cEEEEEecCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999999873  3344444444433 32 688999999999999999999


Q ss_pred             HHHhcCCccEEEEcccCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~  171 (173)
                      +.+.+|++|+||||||+..
T Consensus       122 ~~~~~g~iD~lv~nAg~~~  140 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQT  140 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCC
T ss_pred             HHHHcCCCCEEEECCCCcC
Confidence            9999999999999999854

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.82  E-value=2.5e-19  Score=137.92  Aligned_cols=90  Identities=28%  Similarity=0.426  Sum_probs=81.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++    +. ++.++.+|++|+++++++++++.++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~v~~~~~~~~~~   79 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----GP-AAYAVQMDVTRQDSIDAAIAATVEH   79 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-CceEEEeeCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999988777766655    22 5788999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        80 ~g~id~lv~~Ag~~~   94 (259)
T 4e6p_A           80 AGGLDILVNNAALFD   94 (259)
T ss_dssp             SSSCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999864

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.82  E-value=1.9e-19  Score=140.34  Aligned_cols=92  Identities=18%  Similarity=0.220  Sum_probs=80.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+.+|++|||||++|||+++++.|+++|++|+++++ +.+..++..+++.....  ++.++.+|++|+++++++++++.+
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA--RVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC--CEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999996 66677777777765433  689999999999999999999999


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                      .+|++|+||||||+.
T Consensus       104 ~~g~iD~lvnnAg~~  118 (280)
T 4da9_A          104 EFGRIDCLVNNAGIA  118 (280)
T ss_dssp             HHSCCCEEEEECC--
T ss_pred             HcCCCCEEEECCCcc
Confidence            999999999999983

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.82  E-value=9.7e-20  Score=140.02  Aligned_cols=90  Identities=20%  Similarity=0.280  Sum_probs=74.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++    + .++.++.+|++|+++++++++++.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----G-AAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----C-CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988776666554    2 25788999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        79 ~g~id~lv~nAg~~~   93 (257)
T 3tpc_A           79 FGHVHGLVNCAGTAP   93 (257)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.82  E-value=1.6e-19  Score=140.04  Aligned_cols=90  Identities=21%  Similarity=0.290  Sum_probs=81.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++.+|++|+++++++++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GR-GAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----CT-TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CC-CeEEEECCCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999988877766655    22 578889999999999999999999


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                      .+|++|+||||||+.
T Consensus        82 ~~g~id~lv~nAg~~   96 (271)
T 3tzq_B           82 TFGRLDIVDNNAAHS   96 (271)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HcCCCCEEEECCCCC
Confidence            999999999999987

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.82  E-value=6.7e-20  Score=141.88  Aligned_cols=84  Identities=26%  Similarity=0.249  Sum_probs=74.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.++||++|||||++|||+++++.|+++|++|++++|+.+..          ..  +..++++|++|+++++++++++.+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~--~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LP--EELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SC--TTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CC--cEEEEEcCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999975421          11  234678999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      ++|+||+||||||+..
T Consensus        75 ~~G~iDilVnnAG~~~   90 (261)
T 4h15_A           75 RLGGVDVIVHMLGGSS   90 (261)
T ss_dssp             HTSSCSEEEECCCCCC
T ss_pred             HcCCCCEEEECCCCCc
Confidence            9999999999999864

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=1.8e-19  Score=139.23  Aligned_cols=95  Identities=25%  Similarity=0.371  Sum_probs=83.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      |+.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.......++.++.+|++|+++++++++++.+.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998777766666654322236889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        84 ~g~id~lv~~Ag~~~   98 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN   98 (267)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999763

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.82  E-value=1.2e-19  Score=141.45  Aligned_cols=91  Identities=23%  Similarity=0.335  Sum_probs=81.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++    + .++.++.+|++|+++++++++++.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----G-CGAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----C-SSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C-CcceEEEecCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999988777666555    2 2588899999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus       100 ~~g~iD~lvnnAg~~~  115 (277)
T 3gvc_A          100 AFGGVDKLVANAGVVH  115 (277)
T ss_dssp             HHSSCCEEEECCCCCC
T ss_pred             HcCCCCEEEECCCCCC
Confidence            9999999999999864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.81  E-value=1.4e-19  Score=139.74  Aligned_cols=95  Identities=26%  Similarity=0.313  Sum_probs=82.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh---hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      +.+++|++|||||++|||+++++.|+++|++|++++|..   +.+++..+++... + .++.++.+|++|++++++++++
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-G-AKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-T-CEEEEEECCCCSHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-C-CcEEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999988754   4455556666544 2 3799999999999999999999


Q ss_pred             HHHhcCCccEEEEcccCCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~~  172 (173)
                      +.+.+|++|+||||||+...
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~  104 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLK  104 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCS
T ss_pred             HHHHcCCCCEEEECCCCCCC
Confidence            99999999999999998653

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.81  E-value=7.6e-20  Score=139.89  Aligned_cols=85  Identities=22%  Similarity=0.395  Sum_probs=72.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+++||++|||||++|||+++++.|+++|++|++++|+.+.+++.        ...++..+.+|++|+++++++++    
T Consensus         7 dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~----   74 (242)
T 4b79_A            7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDSQRLQRLFE----   74 (242)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCHHHHHHHHH----
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCHHHHHHHHH----
Confidence            347899999999999999999999999999999999987664321        12368899999999999887764    


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+..+
T Consensus        75 ~~g~iDiLVNNAGi~~~   91 (242)
T 4b79_A           75 ALPRLDVLVNNAGISRD   91 (242)
T ss_dssp             HCSCCSEEEECCCCCCG
T ss_pred             hcCCCCEEEECCCCCCC
Confidence            57999999999998753

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.81  E-value=2.7e-19  Score=141.84  Aligned_cols=93  Identities=19%  Similarity=0.278  Sum_probs=81.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~  144 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++++            .+.+++..+++....  .++.++.+|++|++
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG--RRIIARQADVRDLA  120 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCHH
Confidence            4789999999999999999999999999999999886            455555555555443  26899999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++++++++.+.+|+||+||||||+..
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~  147 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISN  147 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999999999875

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.81  E-value=7.3e-20  Score=143.33  Aligned_cols=94  Identities=27%  Similarity=0.449  Sum_probs=86.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +.+|++|||||++|||+++++.|+++|+   +|++++|+.+.+++..+++....++.++.++.+|++|+++++++++++.
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            6899999999999999999999999997   9999999999998888888776544579999999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus       111 ~~~g~iD~lVnnAG~~~  127 (287)
T 3rku_A          111 QEFKDIDILVNNAGKAL  127 (287)
T ss_dssp             GGGCSCCEEEECCCCCC
T ss_pred             HhcCCCCEEEECCCcCC
Confidence            99999999999999864

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.81  E-value=5.1e-19  Score=137.28  Aligned_cols=94  Identities=29%  Similarity=0.412  Sum_probs=84.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.....  ++.++.+|++|+++++++++++.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   94 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL--NVEGSVCDLLSRTERDKLMQTVAH   94 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999998888777777765422  588899999999999999999999


Q ss_pred             hc-CCccEEEEcccCCC
Q 030706          156 NL-KYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~-g~id~lVn~AG~~~  171 (173)
                      .+ |++|+||||||+..
T Consensus        95 ~~~g~id~lv~nAg~~~  111 (273)
T 1ae1_A           95 VFDGKLNILVNNAGVVI  111 (273)
T ss_dssp             HTTSCCCEEEECCCCCC
T ss_pred             HcCCCCcEEEECCCCCC
Confidence            99 99999999999864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.81  E-value=4.1e-19  Score=137.89  Aligned_cols=94  Identities=22%  Similarity=0.326  Sum_probs=82.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..+++|++|||||++|||++++++|+++|++|++++++ .+..++..+++.....  ++.++.+|++|+++++++++++.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG--RAVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHH
Confidence            44789999999999999999999999999999999765 4556666666655433  68899999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus       105 ~~~g~iD~lvnnAg~~~  121 (271)
T 3v2g_A          105 EALGGLDILVNSAGIWH  121 (271)
T ss_dssp             HHHSCCCEEEECCCCCC
T ss_pred             HHcCCCcEEEECCCCCC
Confidence            99999999999999865

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.81  E-value=2.5e-19  Score=138.08  Aligned_cols=92  Identities=21%  Similarity=0.293  Sum_probs=81.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+.+|++|||||++|||++++++|+++|++|+++ +++.+..++..+++.....  ++.++.+|++|+++++++++++.+
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGR--SALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTS--CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999998 5566666666677665433  588899999999999999999999


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                      .+|++|+||||||+.
T Consensus        83 ~~g~id~lv~nAg~~   97 (259)
T 3edm_A           83 KFGEIHGLVHVAGGL   97 (259)
T ss_dssp             HHCSEEEEEECCCCC
T ss_pred             HhCCCCEEEECCCcc
Confidence            999999999999976

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.81  E-value=2.3e-19  Score=140.19  Aligned_cols=96  Identities=18%  Similarity=0.239  Sum_probs=82.7

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCC----HHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSE----GNEVADL  149 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~----~~~v~~~  149 (173)
                      ...+++|++|||||++|||+++++.|+++|++|++++|+. +..++..+++....+. ++.++.+|++|    +++++++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~~~~~v~~~   96 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN-TAVVCQADLTNSNVLPASCEEI   96 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSCSTTHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCC-ceEEEEeecCCccCCHHHHHHH
Confidence            3447899999999999999999999999999999999998 7777777777533333 68899999999    9999999


Q ss_pred             HHHHHHhcCCccEEEEcccCCC
Q 030706          150 VAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       150 ~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++++.+.+|++|+||||||+..
T Consensus        97 ~~~~~~~~g~iD~lvnnAG~~~  118 (288)
T 2x9g_A           97 INSCFRAFGRCDVLVNNASAFY  118 (288)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHhcCCCCEEEECCCCCC
Confidence            9999999999999999999864

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.81  E-value=5.5e-19  Score=136.03  Aligned_cols=94  Identities=20%  Similarity=0.286  Sum_probs=82.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++....+..++.++.+|++|+++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            37889999999999999999999999999999999998888777777754322225888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +| +|+||||||+..
T Consensus        84 ~g-id~lv~~Ag~~~   97 (260)
T 2z1n_A           84 GG-ADILVYSTGGPR   97 (260)
T ss_dssp             TC-CSEEEECCCCCC
T ss_pred             cC-CCEEEECCCCCC
Confidence            99 999999999764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.81  E-value=2.8e-19  Score=137.57  Aligned_cols=89  Identities=21%  Similarity=0.403  Sum_probs=81.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++    + .++.++.+|++|+++++++++++.+.+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----G-PRVHALRSDIADLNEIAVLGAAAGQTL   80 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----G-GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence            78999999999999999999999999999999999988777666554    2 268899999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        81 g~id~lv~nAg~~~   94 (255)
T 4eso_A           81 GAIDLLHINAGVSE   94 (255)
T ss_dssp             SSEEEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999865

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.81  E-value=3.7e-19  Score=137.21  Aligned_cols=92  Identities=21%  Similarity=0.269  Sum_probs=83.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++....  .++.++.+|++|+++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999888777777775542  25888999999999999999999999


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      +|++|+||||||+.
T Consensus        82 ~g~id~lv~nAg~~   95 (262)
T 1zem_A           82 FGKIDFLFNNAGYQ   95 (262)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             hCCCCEEEECCCCC
Confidence            99999999999986

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.81  E-value=4e-19  Score=137.66  Aligned_cols=94  Identities=24%  Similarity=0.282  Sum_probs=82.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..+++|++|||||++|||++++++|+++|++|++++++ .+..++..+++.....  ++.++.+|++|+++++++++++.
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS--DAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHH
Confidence            45889999999999999999999999999999998764 5556666666665433  68899999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +++|++|+||||||+..
T Consensus        92 ~~~g~id~lvnnAg~~~  108 (270)
T 3is3_A           92 AHFGHLDIAVSNSGVVS  108 (270)
T ss_dssp             HHHSCCCEEECCCCCCC
T ss_pred             HHcCCCCEEEECCCCCC
Confidence            99999999999999864

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.81  E-value=1.7e-19  Score=143.15  Aligned_cols=95  Identities=21%  Similarity=0.289  Sum_probs=84.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC----------hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----------AERVDSAVQSLREEFGEQHVWGTKCDVSEGNE  145 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~  145 (173)
                      ..+++|++|||||++|||+++++.|+++|++|++++|+          .+..++..+++.....  ++.++.+|++|+++
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG--EAVADGSNVADWDQ  100 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC--EEEEECCCTTSHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCC--cEEEEECCCCCHHH
Confidence            34789999999999999999999999999999999987          5667777777765432  68899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccCCCC
Q 030706          146 VADLVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       146 v~~~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      ++++++++.+++|+||+||||||+...
T Consensus       101 v~~~~~~~~~~~g~iD~lv~nAg~~~~  127 (322)
T 3qlj_A          101 AAGLIQTAVETFGGLDVLVNNAGIVRD  127 (322)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            999999999999999999999998753

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.81  E-value=4e-19  Score=136.70  Aligned_cols=93  Identities=35%  Similarity=0.445  Sum_probs=83.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.....  ++.++.+|++|.++++++++++.+.
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL--SVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998887777777765432  5888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        89 ~g~iD~lv~~Ag~~~  103 (260)
T 2zat_A           89 HGGVDILVSNAAVNP  103 (260)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999853

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.81  E-value=2.5e-19  Score=139.64  Aligned_cols=90  Identities=23%  Similarity=0.298  Sum_probs=80.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+.+++...++    +. ++.++.+|++|+++++++++++.+.
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----GG-NAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----BT-TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----CC-cEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            378999999999999999999999999999999999987766554432    32 6889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        77 ~g~iD~lvnnAg~~~   91 (281)
T 3zv4_A           77 FGKIDTLIPNAGIWD   91 (281)
T ss_dssp             HSCCCEEECCCCCCC
T ss_pred             cCCCCEEEECCCcCc
Confidence            999999999999864

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.81  E-value=1.5e-19  Score=139.54  Aligned_cols=91  Identities=18%  Similarity=0.220  Sum_probs=75.6

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.+.+|++|||||++|||+++++.|+++|++|++++|+.+...+...   ..    .+.++.+|++|+++++++++++.
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~----~~~~~~~Dv~~~~~v~~~~~~~~   94 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR---QA----GAVALYGDFSCETGIMAFIDLLK   94 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH---HH----TCEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---hc----CCeEEECCCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999998866533332   22    26788999999999999999999


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                      +.+|++|+||||||+...
T Consensus        95 ~~~g~iD~lv~nAg~~~~  112 (260)
T 3gem_A           95 TQTSSLRAVVHNASEWLA  112 (260)
T ss_dssp             HHCSCCSEEEECCCCCCC
T ss_pred             HhcCCCCEEEECCCccCC
Confidence            999999999999998653

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.81  E-value=3.3e-19  Score=138.70  Aligned_cols=94  Identities=28%  Similarity=0.351  Sum_probs=83.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++..... ..++.++.+|++|+++++++++++.+.
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999999999998888777777755322 115888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        84 ~g~iD~lv~nAg~~~   98 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAI   98 (280)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.81  E-value=1.1e-18  Score=136.64  Aligned_cols=96  Identities=19%  Similarity=0.268  Sum_probs=85.9

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ...+++|++|||||+||||++++++|+++|++|++++|+.+..++..+++....+. ++.++.+|++|.++++++++++.
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988888777777665343 68999999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus       100 ~~~g~id~li~~Ag~~~  116 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNF  116 (302)
T ss_dssp             HHTCSCSEEEECCCCCC
T ss_pred             HHcCCCCEEEECCCCCC
Confidence            99999999999999753

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.81  E-value=5.8e-19  Score=138.49  Aligned_cols=93  Identities=22%  Similarity=0.342  Sum_probs=79.5

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        76 ~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ..+++|++|||||+  +|||+++++.|+++|++|++++|+.+. .+..+++....+  ++.++.+|++|+++++++++++
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEELG--AFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHH
Confidence            34889999999999  459999999999999999999998543 344445544444  4788999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.+|++|+||||||+..
T Consensus       104 ~~~~g~iD~lVnnAG~~~  121 (293)
T 3grk_A          104 EKKWGKLDFLVHAIGFSD  121 (293)
T ss_dssp             HHHTSCCSEEEECCCCCC
T ss_pred             HHhcCCCCEEEECCccCC
Confidence            999999999999999874

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.81  E-value=7.4e-20  Score=140.31  Aligned_cols=89  Identities=22%  Similarity=0.264  Sum_probs=75.3

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.++||++|||||++|||+++++.|+++|++|++++|+..  ++..+++.+.++  ++.++.+|++|+++++++++   
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~--~~~~~~~Dv~d~~~v~~~~~---   76 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGG--NASALLIDFADPLAAKDSFT---   76 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTC--CEEEEECCTTSTTTTTTSST---
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCC--cEEEEEccCCCHHHHHHHHH---
Confidence            35699999999999999999999999999999999999754  345555655543  58899999999999887763   


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                        +|+||+||||||+...
T Consensus        77 --~g~iDiLVNNAGi~~~   92 (247)
T 4hp8_A           77 --DAGFDILVNNAGIIRR   92 (247)
T ss_dssp             --TTCCCEEEECCCCCCC
T ss_pred             --hCCCCEEEECCCCCCC
Confidence              5899999999998754

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.81  E-value=5.4e-19  Score=135.87  Aligned_cols=91  Identities=27%  Similarity=0.384  Sum_probs=82.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++    +. ++.++.+|++|.++++++++++.+
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----GD-AALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CC-ceEEEEecCCCHHHHHHHHHHHHH
Confidence            4478999999999999999999999999999999999988877666554    32 588999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        80 ~~g~id~li~~Ag~~~   95 (261)
T 3n74_A           80 KFGKVDILVNNAGIGH   95 (261)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             hcCCCCEEEECCccCC
Confidence            9999999999999865

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.81  E-value=3.1e-19  Score=138.85  Aligned_cols=93  Identities=27%  Similarity=0.331  Sum_probs=82.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++... +  ++.++.+|++|+++++++++++.+
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~--~~~~~~~Dv~d~~~v~~~~~~~~~  101 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY-G--DCQAIPADLSSEAGARRLAQALGE  101 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS-S--CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C--ceEEEEeeCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999988777776666432 2  588899999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus       102 ~~g~iD~lvnnAg~~~  117 (276)
T 2b4q_A          102 LSARLDILVNNAGTSW  117 (276)
T ss_dssp             HCSCCSEEEECCCCCC
T ss_pred             hcCCCCEEEECCCCCC
Confidence            9999999999999864

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.80  E-value=6.6e-19  Score=134.25  Aligned_cols=95  Identities=16%  Similarity=0.282  Sum_probs=84.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC--CCHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV--SEGNEVADLVAFA  153 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv--~~~~~v~~~~~~~  153 (173)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...+.. ++.++.+|+  +|.++++++++++
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQP-QPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSC-CCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCC-CceEEEeccccCCHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999999888888888765432 466667776  9999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.+|++|+||||||+..
T Consensus        89 ~~~~g~id~lv~nAg~~~  106 (247)
T 3i1j_A           89 EHEFGRLDGLLHNASIIG  106 (247)
T ss_dssp             HHHHSCCSEEEECCCCCC
T ss_pred             HHhCCCCCEEEECCccCC
Confidence            999999999999999863

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.80  E-value=4.7e-19  Score=142.20  Aligned_cols=94  Identities=28%  Similarity=0.386  Sum_probs=82.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-------HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------VDSAVQSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+.       +++..+++... + .++.++.+|++|++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-g-~~~~~~~~Dv~d~~~v~~  118 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-G-GKALPCIVDVRDEQQISA  118 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-T-CEEEEEECCTTCHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-C-CeEEEEEccCCCHHHHHH
Confidence            45889999999999999999999999999999999998764       45556666554 3 268999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccCCC
Q 030706          149 LVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       149 ~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +++++.+.+|+||+||||||+..
T Consensus       119 ~~~~~~~~~g~iDilVnnAG~~~  141 (346)
T 3kvo_A          119 AVEKAIKKFGGIDILVNNASAIS  141 (346)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC
Confidence            99999999999999999999865

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.80  E-value=4.3e-19  Score=139.48  Aligned_cols=94  Identities=26%  Similarity=0.356  Sum_probs=83.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.+|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++..... ..++.++.+|++|+++++++++++.+.
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999999998888877777765422 115888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus       104 ~g~iD~lvnnAG~~~  118 (297)
T 1xhl_A          104 FGKIDILVNNAGANL  118 (297)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCcCc
Confidence            999999999999864

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.80  E-value=6.5e-19  Score=136.46  Aligned_cols=96  Identities=26%  Similarity=0.270  Sum_probs=82.0

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .+.+.+|++|||||++|||++++++|+++|++|++++|+. +..+...+++... + .++.++.+|++|+++++++++++
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-G-YKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-C-CceEEEECCCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999954 4445555555443 3 26899999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCCC
Q 030706          154 QKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~~  172 (173)
                      .+.+|++|+||||||+...
T Consensus       102 ~~~~g~id~li~nAg~~~~  120 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRD  120 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCC
T ss_pred             HHhcCCCCEEEECCCcCCC
Confidence            9999999999999998753

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.80  E-value=3e-19  Score=138.82  Aligned_cols=90  Identities=19%  Similarity=0.285  Sum_probs=79.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++    + .++.++.+|++|+++++++++++.+.
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~d~~~v~~~~~~~~~~   99 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----G-DDALCVPTDVTDPDSVRALFTATVEK   99 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----T-SCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----C-CCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999988877766655    2 25888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus       100 ~g~iD~lVnnAg~~~  114 (272)
T 4dyv_A          100 FGRVDVLFNNAGTGA  114 (272)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.80  E-value=7.6e-19  Score=134.95  Aligned_cols=90  Identities=28%  Similarity=0.349  Sum_probs=81.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.+.+|+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG--HAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999998887777777755432  5888999999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||+..
T Consensus        80 id~lv~nAg~~~   91 (256)
T 1geg_A           80 FDVIVNNAGVAP   91 (256)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            999999999864

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.80  E-value=3.6e-19  Score=139.41  Aligned_cols=94  Identities=21%  Similarity=0.214  Sum_probs=83.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHH-----------
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGN-----------  144 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-----------  144 (173)
                      .+.+|++|||||++|||+++++.|+++|++|++++ |+.+..++..+++....+. ++.++.+|++|.+           
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCCCC----CC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCC-eeEEEEeecCCccccccccccccc
Confidence            37899999999999999999999999999999999 9988888877777633333 6889999999999           


Q ss_pred             ------HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          145 ------EVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       145 ------~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                            +++++++++.+.+|++|+||||||+..
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~  117 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFY  117 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence                  999999999999999999999999864

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.80  E-value=3.9e-19  Score=137.71  Aligned_cols=95  Identities=21%  Similarity=0.273  Sum_probs=81.7

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ..|.++|++|||||++|||++++++|+++|++|+++ .|+.+..++..+++....  .++.++.+|++|.++++++++++
T Consensus        21 ~~m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~   98 (272)
T 4e3z_A           21 QSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG--GEAVAIPGDVGNAADIAAMFSAV   98 (272)
T ss_dssp             ---CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHH
Confidence            345678999999999999999999999999999887 677777777777665543  36999999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.+|++|+||||||+..
T Consensus        99 ~~~~g~id~li~nAg~~~  116 (272)
T 4e3z_A           99 DRQFGRLDGLVNNAGIVD  116 (272)
T ss_dssp             HHHHSCCCEEEECCCCCC
T ss_pred             HHhCCCCCEEEECCCCCC
Confidence            999999999999999864

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.80  E-value=4.2e-19  Score=137.62  Aligned_cols=93  Identities=19%  Similarity=0.187  Sum_probs=82.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCH----HHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEG----NEVADLVAF  152 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~----~~v~~~~~~  152 (173)
                      +.+|++|||||++|||+++++.|+++|++|++++| +.+..++..+++....+. ++.++.+|++|.    +++++++++
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG-SAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCC-ceEEEeccCCCccccHHHHHHHHHH
Confidence            67899999999999999999999999999999999 888887777777654233 688999999999    999999999


Q ss_pred             HHHhcCCccEEEEcccCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~  171 (173)
                      +.+.+|++|+||||||+..
T Consensus        88 ~~~~~g~id~lv~nAg~~~  106 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYY  106 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHhcCCCCEEEECCCCCC
Confidence            9999999999999999864

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.80  E-value=8.6e-19  Score=136.15  Aligned_cols=94  Identities=20%  Similarity=0.339  Sum_probs=84.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.......++.++.+|++|+++++++++++.+.+
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            78999999999999999999999999999999999988887777777655433468889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus       110 g~iD~vi~~Ag~~~  123 (279)
T 1xg5_A          110 SGVDICINNAGLAR  123 (279)
T ss_dssp             CCCSEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.80  E-value=1.3e-18  Score=134.91  Aligned_cols=94  Identities=19%  Similarity=0.184  Sum_probs=84.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.+
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA--KVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC--eEEEEEeeCCCHHHHHHHHHHHHH
Confidence            447899999999999999999999999999999999998887777777765432  688999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus       105 ~~g~iD~li~~Ag~~~  120 (272)
T 1yb1_A          105 EIGDVSILVNNAGVVY  120 (272)
T ss_dssp             HTCCCSEEEECCCCCC
T ss_pred             HCCCCcEEEECCCcCC
Confidence            9999999999999864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.80  E-value=4.1e-19  Score=137.46  Aligned_cols=95  Identities=17%  Similarity=0.259  Sum_probs=78.9

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ..|+.+|++|||||++|||++++++|+++|++|++++ ++.+..++...++... + .++.++.+|++|.++++++++++
T Consensus        20 ~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~v~~~~~~~   97 (269)
T 3gk3_A           20 GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA-G-RDFKAYAVDVADFESCERCAEKV   97 (269)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT-T-CCCEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-C-CceEEEEecCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999998 5555555555555433 2 36889999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.+|++|+||||||+..
T Consensus        98 ~~~~g~id~li~nAg~~~  115 (269)
T 3gk3_A           98 LADFGKVDVLINNAGITR  115 (269)
T ss_dssp             HHHHSCCSEEEECCCCCC
T ss_pred             HHHcCCCCEEEECCCcCC
Confidence            999999999999999875

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.80  E-value=2.1e-19  Score=138.63  Aligned_cols=96  Identities=22%  Similarity=0.317  Sum_probs=84.8

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhH-HHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERV-DSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        76 ~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      +.+++|++|||||+  +|||++++++|+++|++|++++++.+.. ++..+++....+. ++.++.+|++|++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI-KAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCC-CEECCBCCTTCHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCC-ceeEEecCCCCHHHHHHHHHH
Confidence            45789999999999  9999999999999999999999876554 6667777665554 799999999999999999999


Q ss_pred             HHHhcCCccEEEEcccCCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~~  172 (173)
                      +.+.+|++|+||||||+...
T Consensus        95 ~~~~~g~id~li~nAg~~~~  114 (267)
T 3gdg_A           95 VVADFGQIDAFIANAGATAD  114 (267)
T ss_dssp             HHHHTSCCSEEEECCCCCCC
T ss_pred             HHHHcCCCCEEEECCCcCCC
Confidence            99999999999999998753

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.80  E-value=1.5e-18  Score=132.09  Aligned_cols=94  Identities=26%  Similarity=0.389  Sum_probs=83.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||+||||++++++|+++|++|++++|+.+..++..+++....+. ++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV-KAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC-ceEEEEccCCCHHHHHHHHHHHHHh
Confidence            477899999999999999999999999999999999988777776666553343 6889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        83 ~~~~d~vi~~Ag~~~   97 (248)
T 2pnf_A           83 VDGIDILVNNAGITR   97 (248)
T ss_dssp             SSCCSEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.80  E-value=1.2e-18  Score=135.75  Aligned_cols=94  Identities=23%  Similarity=0.302  Sum_probs=80.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +.+++|++|||||++|||+++++.|+++|++|++++|+.+. .++..+++... +. ++.++.+|++|.++++++++++.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GS-DAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh-CC-CeEEEEcCCCCHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999998654 44445555443 22 58889999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus       103 ~~~g~iD~lv~~Ag~~~  119 (283)
T 1g0o_A          103 KIFGKLDIVCSNSGVVS  119 (283)
T ss_dssp             HHHSCCCEEEECCCCCC
T ss_pred             HHcCCCCEEEECCCcCC
Confidence            99999999999999864

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.80  E-value=7.9e-19  Score=135.01  Aligned_cols=90  Identities=14%  Similarity=0.253  Sum_probs=80.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +|++|||||++|||+++++.|+++|++|++++|+.+.  .++..+++... + .++.++.+|++|+++++++++++.+.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-D-QKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-T-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999998876  66666666543 2 268899999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        80 g~iD~lv~nAg~~~   93 (258)
T 3a28_C           80 GGFDVLVNNAGIAQ   93 (258)
T ss_dssp             TCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.80  E-value=8.3e-19  Score=134.85  Aligned_cols=95  Identities=17%  Similarity=0.235  Sum_probs=84.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHH---cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~---~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .+++|++|||||++|||+++++.|++   +|++|++++|+.+..++..+++....+..++.++.+|++|+++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            36789999999999999999999999   899999999999888888777766533347899999999999999999999


Q ss_pred             HH--hcCCcc--EEEEcccCCC
Q 030706          154 QK--NLKYVD--IWVFMSDLHS  171 (173)
Q Consensus       154 ~~--~~g~id--~lVn~AG~~~  171 (173)
                      .+  .+|++|  +||||||+..
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~  104 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLG  104 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCC
T ss_pred             HhccccccCCccEEEECCcccC
Confidence            88  778999  9999999863

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.79  E-value=7.1e-19  Score=136.83  Aligned_cols=93  Identities=28%  Similarity=0.293  Sum_probs=84.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.....  ++.++.+|++|.++++++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG--TAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC--CEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999999888888888766433  588999999999999999999988


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      . |++|+||||||+..
T Consensus       107 ~-g~iD~lvnnAg~~~  121 (275)
T 4imr_A          107 I-APVDILVINASAQI  121 (275)
T ss_dssp             H-SCCCEEEECCCCCC
T ss_pred             h-CCCCEEEECCCCCC
Confidence            7 99999999999864

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.79  E-value=1.3e-18  Score=133.26  Aligned_cols=89  Identities=27%  Similarity=0.413  Sum_probs=77.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++|++|||||++|||+++++.|+++|++|++++|+. +..++   ++... + .++.++.+|++|+++++++++++.+.
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~-~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL-G-RRVLTVKCDVSQPGDVEAFGKQVIST   79 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT-T-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc-C-CcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999987 55544   33322 3 26888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        80 ~g~id~lv~nAg~~~   94 (249)
T 2ew8_A           80 FGRCDILVNNAGIYP   94 (249)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.79  E-value=7.8e-19  Score=134.75  Aligned_cols=89  Identities=21%  Similarity=0.274  Sum_probs=80.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++    + .++.++.+|++|+++++++++++.+.+
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----G-ERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----C-TTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C-CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999987776655554    2 258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        79 g~id~lv~~Ag~~~   92 (253)
T 1hxh_A           79 GTLNVLVNNAGILL   92 (253)
T ss_dssp             CSCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.79  E-value=1.5e-18  Score=134.20  Aligned_cols=93  Identities=26%  Similarity=0.419  Sum_probs=82.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...++...+.++.+|++|++++++++    +
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~----~   81 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI----E   81 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH----H
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH----H
Confidence            457899999999999999999999999999999999999988888888887765557889999999999887765    4


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|++|+||||||+..+
T Consensus        82 ~~g~id~lv~nAg~~~~   98 (267)
T 3t4x_A           82 KYPKVDILINNLGIFEP   98 (267)
T ss_dssp             HCCCCSEEEECCCCCCC
T ss_pred             hcCCCCEEEECCCCCCC
Confidence            57999999999998753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.79  E-value=9.7e-19  Score=134.64  Aligned_cols=89  Identities=25%  Similarity=0.365  Sum_probs=80.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh-
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN-  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-  156 (173)
                      +++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++... +. ++.++.+|++|+++++++++++.+. 
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-GG-QCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-SS-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CC-ceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            67899999999999999999999999999999999988887777777654 32 6889999999999999999999886 


Q ss_pred             cCCccEEEEccc
Q 030706          157 LKYVDIWVFMSD  168 (173)
Q Consensus       157 ~g~id~lVn~AG  168 (173)
                      +|++|+||||||
T Consensus        81 ~g~id~lvnnAg   92 (260)
T 2qq5_A           81 QGRLDVLVNNAY   92 (260)
T ss_dssp             TTCCCEEEECCC
T ss_pred             CCCceEEEECCc
Confidence            899999999995

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.79  E-value=1.5e-18  Score=133.00  Aligned_cols=93  Identities=27%  Similarity=0.293  Sum_probs=83.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.+.
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH--DVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998877777777655432  5889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        88 ~~~id~vi~~Ag~~~  102 (260)
T 3awd_A           88 EGRVDILVACAGICI  102 (260)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.79  E-value=5.9e-19  Score=135.29  Aligned_cols=95  Identities=13%  Similarity=0.175  Sum_probs=79.7

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ....++|++|||||++|||++++++|+++|++|++++ ++.+..++..+++.....  ++.++.+|++|.++++++++++
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGF--DFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC--eeEEEecCCCCHHHHHHHHHHH
Confidence            3447889999999999999999999999999999988 666666666666655433  5888999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.+|++|+||||||+..
T Consensus        86 ~~~~g~id~lv~~Ag~~~  103 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITR  103 (256)
T ss_dssp             HHHTCCEEEEEECCCCCC
T ss_pred             HHhcCCCCEEEECCCCCC
Confidence            999999999999999875

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.79  E-value=9.7e-19  Score=134.82  Aligned_cols=95  Identities=20%  Similarity=0.320  Sum_probs=81.3

Q ss_pred             CCCCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHH
Q 030706           74 REPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        74 ~~~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      ....+.+|++|||||+  +|||++++++|+++|++|++++|+.. ..+..+++....+  ++.++.+|++|+++++++++
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFG--SELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHH
Confidence            3445889999999998  99999999999999999999999854 3444555555544  37888999999999999999


Q ss_pred             HHHHhcCCccEEEEcccCCC
Q 030706          152 FAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       152 ~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++.+.+|++|+||||||+..
T Consensus        85 ~~~~~~g~id~lv~nAg~~~  104 (271)
T 3ek2_A           85 SLKTHWDSLDGLVHSIGFAP  104 (271)
T ss_dssp             HHHHHCSCEEEEEECCCCCC
T ss_pred             HHHHHcCCCCEEEECCccCc
Confidence            99999999999999999864

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.79  E-value=1.3e-18  Score=134.17  Aligned_cols=89  Identities=16%  Similarity=0.209  Sum_probs=79.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|++|||||++|||++++++|+++|++|++++|+.+..++..+++..     ++.++.+|++|+++++++++++.+.+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~   79 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD-----AARYVHLDVTQPAQWKAAVDTAVTAF   79 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc-----CceEEEecCCCHHHHHHHHHHHHHHc
Confidence            6789999999999999999999999999999999998776665554421     47888999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        80 g~iD~lv~~Ag~~~   93 (260)
T 1nff_A           80 GGLHVLVNNAGILN   93 (260)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.79  E-value=1e-18  Score=134.25  Aligned_cols=94  Identities=23%  Similarity=0.372  Sum_probs=82.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+..++..+++....+. ++.++.+|++|.++++++++++.+.
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV-KTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCC-eeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            477899999999999999999999999999999999776666666666554443 6889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        90 ~~~id~li~~Ag~~~  104 (265)
T 1h5q_A           90 LGPISGLIANAGVSV  104 (265)
T ss_dssp             SCSEEEEEECCCCCC
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999864

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.79  E-value=1e-18  Score=134.25  Aligned_cols=89  Identities=25%  Similarity=0.362  Sum_probs=79.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++    + .++.++.+|++|+++++++++++.+.+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----G-DAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----G-GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999987766555443    2 258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        78 g~iD~lv~nAg~~~   91 (254)
T 1hdc_A           78 GSVDGLVNNAGIST   91 (254)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=2.7e-18  Score=134.63  Aligned_cols=96  Identities=29%  Similarity=0.456  Sum_probs=84.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh---CCceEEEEEeeCCCHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF---GEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      ..+.+|+++||||++|||++++++|+++|++|++++|+.+..++..+++....   ...++.++.+|++|++++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            35789999999999999999999999999999999999888877777776521   123689999999999999999999


Q ss_pred             HHHhcCCccEEEEcccCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~  171 (173)
                      +.+.+|++|+||||||+..
T Consensus        94 ~~~~~g~id~li~~Ag~~~  112 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQF  112 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHHcCCCCEEEECCCCCC
Confidence            9999999999999999753

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.79  E-value=7.3e-19  Score=135.89  Aligned_cols=89  Identities=22%  Similarity=0.318  Sum_probs=79.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++    . .++.++.+|++|+++++++++++.+.+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----E-AEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----C-SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----c-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999987766554433    2 258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        79 g~iD~lvnnAg~~~   92 (263)
T 2a4k_A           79 GRLHGVAHFAGVAH   92 (263)
T ss_dssp             SCCCEEEEGGGGTT
T ss_pred             CCCcEEEECCCCCC
Confidence            99999999999864

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.79  E-value=1e-18  Score=139.12  Aligned_cols=93  Identities=22%  Similarity=0.219  Sum_probs=83.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHH------------
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGN------------  144 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~------------  144 (173)
                      +.+|++|||||++|||+++++.|+++|++|++++ |+.+.+++..+++....+. ++.++.+|++|.+            
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCC-------CC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC-eEEEEEeeCCCchhccccccccccc
Confidence            7899999999999999999999999999999999 9988888877777633343 6889999999999            


Q ss_pred             -----HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          145 -----EVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       145 -----~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                           +++++++++.+.+|++|+||||||+..
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~  154 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFY  154 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence                 999999999999999999999999864

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.79  E-value=1.2e-18  Score=135.65  Aligned_cols=92  Identities=26%  Similarity=0.324  Sum_probs=80.5

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        76 ~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ..+++|++|||||+  +|||+++++.|+++|++|++++|+.  .++..+++....+  ++.++.+|++|.++++++++++
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN--PAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC--CSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHHHH
Confidence            35789999999988  7799999999999999999999987  4455566655555  3788899999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.+|++|+||||||+..
T Consensus        98 ~~~~g~id~li~nAg~~~  115 (280)
T 3nrc_A           98 GKVWDGLDAIVHSIAFAP  115 (280)
T ss_dssp             HHHCSSCCEEEECCCCCC
T ss_pred             HHHcCCCCEEEECCccCC
Confidence            999999999999999864

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=7.6e-19  Score=136.31  Aligned_cols=94  Identities=28%  Similarity=0.335  Sum_probs=80.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh-CCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.... ...++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999888777766663211 1236889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        84 ~g~id~lv~~Ag~~~   98 (278)
T 1spx_A           84 FGKLDILVNNAGAAI   98 (278)
T ss_dssp             HSCCCEEEECCC---
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.78  E-value=1.3e-18  Score=132.93  Aligned_cols=87  Identities=28%  Similarity=0.351  Sum_probs=77.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..++..+++    +   +.++.+|++|+++++++++++.+.+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~---~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----G---AHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----T---CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C---CEEEEecCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999987665544322    1   6678899999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        76 g~id~lvn~Ag~~~   89 (245)
T 1uls_A           76 GRLDGVVHYAGITR   89 (245)
T ss_dssp             SSCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.78  E-value=9.6e-19  Score=136.01  Aligned_cols=90  Identities=18%  Similarity=0.241  Sum_probs=79.4

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.+.+|++|||||++|||++++++|+++|++|++++|+.+..++..+++    +. ++.++.+|++|.++++++++++ 
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~-~~~~~~~Dl~~~~~v~~~~~~~-   98 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GN-RAEFVSTNVTSEDSVLAAIEAA-   98 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHHH-
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CC-ceEEEEcCCCCHHHHHHHHHHH-
Confidence            34478999999999999999999999999999999999988877766655    32 6899999999999999999999 


Q ss_pred             HhcCCccEEEEc-ccCC
Q 030706          155 KNLKYVDIWVFM-SDLH  170 (173)
Q Consensus       155 ~~~g~id~lVn~-AG~~  170 (173)
                      ++++++|+|||| ||+.
T Consensus        99 ~~~~~id~lv~~aag~~  115 (281)
T 3ppi_A           99 NQLGRLRYAVVAHGGFG  115 (281)
T ss_dssp             TTSSEEEEEEECCCCCC
T ss_pred             HHhCCCCeEEEccCccc
Confidence            889999999999 5553

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.78  E-value=1.6e-18  Score=137.93  Aligned_cols=93  Identities=19%  Similarity=0.235  Sum_probs=76.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-----hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-----AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      ++++|++|||||++|||+++++.|+++|++|++++|+     .+..++..+.+... +. ++.++.+|++|+++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~-~~-~~~~~~~Dvtd~~~v~~~~~   79 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-DV-DLRTLELDVQSQVSVDRAID   79 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH-TC-CEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc-CC-cEEEEEeecCCHHHHHHHHH
Confidence            3678999999999999999999999999999998876     33444444444433 32 68999999999999999999


Q ss_pred             HHHHhcCCccEEEEcccCCC
Q 030706          152 FAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       152 ~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++.+.+|++|+||||||+..
T Consensus        80 ~~~~~~g~iD~lVnnAG~~~   99 (324)
T 3u9l_A           80 QIIGEDGRIDVLIHNAGHMV   99 (324)
T ss_dssp             HHHHHHSCCSEEEECCCCCB
T ss_pred             HHHHHcCCCCEEEECCCcCC
Confidence            99999999999999999764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.78  E-value=9.1e-19  Score=134.93  Aligned_cols=90  Identities=24%  Similarity=0.318  Sum_probs=78.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.    . ++.++.+|++|+++++++++++.+.
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----N-GGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT----T-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----c-CCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999876655444332    1 4778899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        84 ~g~iD~lv~~Ag~~~   98 (263)
T 3ak4_A           84 LGGFDLLCANAGVST   98 (263)
T ss_dssp             HTCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999864

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.78  E-value=2e-18  Score=131.87  Aligned_cols=93  Identities=28%  Similarity=0.441  Sum_probs=83.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||+||||++++++|+++|++|++++|+.+..++..+++.....  ++.++.+|++|+++++++++++.+.
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG--QAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC--ceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            37789999999999999999999999999999999998877777777765433  5888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        86 ~~~~d~vi~~Ag~~~  100 (255)
T 1fmc_A           86 LGKVDILVNNAGGGG  100 (255)
T ss_dssp             HSSCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.78  E-value=2.1e-18  Score=133.25  Aligned_cols=94  Identities=19%  Similarity=0.206  Sum_probs=81.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+.+|++|||||++|||++++++|+++|++|+++ .|+.+..++..+++.....  ++.++.+|++|+++++++++++.+
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGG--NGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999765 5677777777777766543  588999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      .+|++|+||||||+...
T Consensus       101 ~~g~id~li~nAg~~~~  117 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARD  117 (267)
T ss_dssp             HHCCCSEEEECCCCCCC
T ss_pred             HhCCccEEEECCCCCCC
Confidence            99999999999998753

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.78  E-value=3.3e-18  Score=133.39  Aligned_cols=94  Identities=26%  Similarity=0.290  Sum_probs=83.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ++.+|+++||||+||||+++++.|+++|++|++++|+.+..++..+++...+. .++.++.+|++|.++++++++++.+.
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999888877777765533 36889999999999999999999999


Q ss_pred             cCCccEEEEc-ccCCC
Q 030706          157 LKYVDIWVFM-SDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~-AG~~~  171 (173)
                      +|++|+|||| ||+..
T Consensus       104 ~g~iD~li~naag~~~  119 (286)
T 1xu9_A          104 MGGLDMLILNHITNTS  119 (286)
T ss_dssp             HTSCSEEEECCCCCCC
T ss_pred             cCCCCEEEECCccCCC
Confidence            9999999999 67643

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.78  E-value=3.5e-18  Score=133.25  Aligned_cols=94  Identities=28%  Similarity=0.291  Sum_probs=83.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.....  ++.++.+|++|.++++++++++.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~~  117 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY--ESSGYAGDVSKKEEISEVINKILT  117 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC--ceeEEECCCCCHHHHHHHHHHHHH
Confidence            447789999999999999999999999999999999988877777777654322  588899999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .++++|+||||||+..
T Consensus       118 ~~~~id~li~~Ag~~~  133 (285)
T 2c07_A          118 EHKNVDILVNNAGITR  133 (285)
T ss_dssp             HCSCCCEEEECCCCCC
T ss_pred             hcCCCCEEEECCCCCC
Confidence            9999999999999864

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.78  E-value=2.6e-18  Score=132.01  Aligned_cols=90  Identities=20%  Similarity=0.316  Sum_probs=80.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++    +. ++.++.+|++|+++++++++++.+.
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GN-NCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----CC-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987776665554    22 5889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        84 ~g~id~li~~Ag~~~   98 (265)
T 2o23_A           84 FGRVDVAVNCAGIAV   98 (265)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             CCCCCEEEECCccCC
Confidence            999999999999864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.78  E-value=2.1e-18  Score=133.06  Aligned_cols=95  Identities=16%  Similarity=0.254  Sum_probs=80.4

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        76 ~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +.+++|++|||||+  +|||++++++|+++|++|++++|+....+ ..+++....+..++.++.+|++|+++++++++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK-SVHELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH-HHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            34789999999999  56999999999999999999999865443 3444444434336889999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.+|++|+||||||+..
T Consensus        82 ~~~~g~id~li~~Ag~~~   99 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFAN   99 (266)
T ss_dssp             HHHHSCCCEEEECCCCCC
T ss_pred             HHHhCCeeEEEEcccccc
Confidence            999999999999999864

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.78  E-value=5.7e-19  Score=137.22  Aligned_cols=90  Identities=22%  Similarity=0.319  Sum_probs=79.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +. |++|||||++|||+++++.|+++|++|++++|+.+.+++..+++...   .++.++.+|++|+++++++++++.+.+
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~   95 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEF   95 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            55 99999999999999999999999999999999988777776666432   258899999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        96 g~iD~lvnnAG~~~  109 (272)
T 2nwq_A           96 ATLRGLINNAGLAL  109 (272)
T ss_dssp             SSCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=2e-18  Score=133.84  Aligned_cols=88  Identities=25%  Similarity=0.406  Sum_probs=78.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++    .  .+.++.+|++|+++++++++++.+.+
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----P--GAVFILCDVTQEDDVKTLVSETIRRF   80 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----T--TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----c--CCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999987665544432    2  37788999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        81 g~iD~lv~nAg~~~   94 (270)
T 1yde_A           81 GRLDCVVNNAGHHP   94 (270)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.78  E-value=2.6e-18  Score=133.28  Aligned_cols=94  Identities=26%  Similarity=0.380  Sum_probs=82.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+.+|++|||||++|||++++++|+++|++|++++|+.+..++..+.+... +. ++.++.+|++|.++++++++++.+
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~  107 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY-GV-HSKAYKCNISDPKSVEETISQQEK  107 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH-CS-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cceEEEeecCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999887766666555443 32 588999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus       108 ~~g~id~li~~Ag~~~  123 (279)
T 3ctm_A          108 DFGTIDVFVANAGVTW  123 (279)
T ss_dssp             HHSCCSEEEECGGGST
T ss_pred             HhCCCCEEEECCcccc
Confidence            9999999999999864

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.78  E-value=3e-18  Score=133.14  Aligned_cols=94  Identities=19%  Similarity=0.276  Sum_probs=78.5

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.+++|++|||||++|||+++++.|+++|++|++++|+ +..++..+++....  .++.++.+|++|.++++++. +..
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~-~~~  101 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGG--GSAEAVVADLADLEGAANVA-EEL  101 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTT--CEEEEEECCTTCHHHHHHHH-HHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHH-HHH
Confidence            345889999999999999999999999999999999975 44556666665432  36899999999999999994 445


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                      +++|++|+||||||+...
T Consensus       102 ~~~g~iD~lv~nAg~~~~  119 (273)
T 3uf0_A          102 AATRRVDVLVNNAGIIAR  119 (273)
T ss_dssp             HHHSCCCEEEECCCCCCC
T ss_pred             HhcCCCcEEEECCCCCCC
Confidence            667999999999998753

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.78  E-value=2e-18  Score=132.54  Aligned_cols=90  Identities=27%  Similarity=0.417  Sum_probs=78.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||++|||+++++.|+++|++|++++|+.+  ++..+++... + .++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~-~-~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH-G-VKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT-S-CCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc-C-CceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999875  4444555433 2 258889999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        78 g~id~lv~~Ag~~~   91 (255)
T 2q2v_A           78 GGVDILVNNAGIQH   91 (255)
T ss_dssp             SSCSEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.77  E-value=3.7e-18  Score=131.42  Aligned_cols=94  Identities=27%  Similarity=0.336  Sum_probs=82.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+.+|++|||||++|||++++++|+++|++|++++|+.+..++..+++.....  ++.++.+|++|.++++++++++.+
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eeEEEECCCCCHHHHHHHHHHHHH
Confidence            447899999999999999999999999999999999998887777777765422  588899999999999999999999


Q ss_pred             hc-CCccEEEEcccCCC
Q 030706          156 NL-KYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~-g~id~lVn~AG~~~  171 (173)
                      .+ +++|+||||||+..
T Consensus        88 ~~~~~id~li~~Ag~~~  104 (266)
T 1xq1_A           88 MFGGKLDILINNLGAIR  104 (266)
T ss_dssp             HHTTCCSEEEEECCC--
T ss_pred             HhCCCCcEEEECCCCCC
Confidence            99 89999999999754

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.77  E-value=4.7e-18  Score=131.45  Aligned_cols=93  Identities=24%  Similarity=0.312  Sum_probs=80.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+.+|++|||||++|||++++++|+++|++|++++|+.+..++..+++..   ..++.++.+|++|+++++++++++.+
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999988766655554421   12588999999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        89 ~~~~id~li~~Ag~~~  104 (278)
T 2bgk_A           89 KHGKLDIMFGNVGVLS  104 (278)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HcCCCCEEEECCcccC
Confidence            9999999999999864

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.77  E-value=3e-18  Score=131.82  Aligned_cols=92  Identities=24%  Similarity=0.306  Sum_probs=82.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++|++|||||+||||++++++|++ .|++|++++|+.+..++..+++.....  ++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL--SPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC--eeEEEECCCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999 999999999998888777777765432  5888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        80 ~g~id~li~~Ag~~~   94 (276)
T 1wma_A           80 YGGLDVLVNNAGIAF   94 (276)
T ss_dssp             HSSEEEEEECCCCCC
T ss_pred             cCCCCEEEECCcccc
Confidence            999999999999864

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.77  E-value=3.4e-18  Score=131.35  Aligned_cols=86  Identities=26%  Similarity=0.375  Sum_probs=76.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||++|||++++++|+++|++|++++|+.+. ++..+++.      + .++.+|++|+++++++++++.+.+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~------~-~~~~~D~~~~~~~~~~~~~~~~~~   75 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG------G-AFFQVDLEDERERVRFVEEAAYAL   75 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT------C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh------C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999998776 55444431      3 678999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        76 g~iD~lv~~Ag~~~   89 (256)
T 2d1y_A           76 GRVDVLVNNAAIAA   89 (256)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.77  E-value=3.7e-18  Score=131.67  Aligned_cols=94  Identities=23%  Similarity=0.271  Sum_probs=82.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +.+++|++|||||+||||++++++|+++|++|++++| +.+..++..+++.....  ++.++.+|++|+++++++++++.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA--QGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999 77667666666655322  58889999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus        95 ~~~~~~d~vi~~Ag~~~  111 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEV  111 (274)
T ss_dssp             HHHSCEEEEECCCCCCC
T ss_pred             HHcCCCCEEEECCCCCC
Confidence            99999999999999864

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.77  E-value=2.1e-18  Score=132.75  Aligned_cols=91  Identities=18%  Similarity=0.243  Sum_probs=76.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|++|||||++|||++++++|+++|++|++++++.+...+...+.....+ .++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVE-ERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGG-GGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4579999999999999999999999999999998876554443333333323 369999999999999999999999999


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      |++|+||||||+
T Consensus        84 g~id~lv~~Ag~   95 (264)
T 3i4f_A           84 GKIDFLINNAGP   95 (264)
T ss_dssp             SCCCEEECCCCC
T ss_pred             CCCCEEEECCcc
Confidence            999999999994

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.77  E-value=3.3e-18  Score=130.14  Aligned_cols=92  Identities=24%  Similarity=0.368  Sum_probs=77.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++|++|||||++|||++++++|+++|++|+++ .|+.+..++..+++....  .++.++.+|++|+++++++++++.+.
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG--INVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999998 567666666666665432  25889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        81 ~~~~d~vi~~Ag~~~   95 (247)
T 2hq1_A           81 FGRIDILVNNAGITR   95 (247)
T ss_dssp             HSCCCEEEECC----
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.77  E-value=3.2e-18  Score=130.47  Aligned_cols=91  Identities=23%  Similarity=0.403  Sum_probs=79.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++..+++....+ .++.++.+|++|+++++++++++.+.+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999998877766665522222 26889999999999999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||+..
T Consensus        81 id~li~~Ag~~~   92 (250)
T 2cfc_A           81 IDVLVNNAGITG   92 (250)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            999999999864

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.77  E-value=3.6e-18  Score=131.09  Aligned_cols=92  Identities=26%  Similarity=0.408  Sum_probs=81.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.+|++|||||++|||++++++|+++|++|++++| +.+..++..+++... + .++.++.+|++|+++++++++++.+.
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-G-GEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-C-CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999 777776666666543 2 26889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        83 ~g~id~li~~Ag~~~   97 (261)
T 1gee_A           83 FGKLDVMINNAGLEN   97 (261)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.77  E-value=3e-18  Score=132.98  Aligned_cols=91  Identities=21%  Similarity=0.315  Sum_probs=79.9

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+|++|||||+  +|||+++++.|+++|++|++++|+.+ .++..+++....+  .+.++.+|++|+++++++++++.+
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHH
Confidence            678999999999  99999999999999999999999876 4555566655444  367889999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        81 ~~g~id~lv~nAg~~~   96 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFAP   96 (275)
T ss_dssp             HTSCEEEEEECCCCCC
T ss_pred             HcCCCCEEEECCccCc
Confidence            9999999999999864

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.77  E-value=7e-18  Score=128.86  Aligned_cols=90  Identities=27%  Similarity=0.361  Sum_probs=79.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceE-EEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV-WGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +.+.+|+++||||+||||++++++|+++|++|++++|+.+..++..+++    +. ++ .++.+|++|.++++++++++.
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL----GA-AVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GG-GEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cc-cceeEEEEecCCHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999987776665554    22 46 888999999999999999998


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      + ++++|+||||||+..
T Consensus        82 ~-~~~id~li~~Ag~~~   97 (254)
T 2wsb_A           82 A-VAPVSILVNSAGIAR   97 (254)
T ss_dssp             H-HSCCCEEEECCCCCC
T ss_pred             h-hCCCcEEEECCccCC
Confidence            8 899999999999864

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.77  E-value=3.4e-18  Score=131.28  Aligned_cols=95  Identities=21%  Similarity=0.221  Sum_probs=79.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh-----CCceEEEEEeeCCCHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-----GEQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++...+     +..++.++.+|++|.++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            3678999999999999999999999999999999999877766655554322     01257889999999999999999


Q ss_pred             HHHHhcCCc-cEEEEcccCCC
Q 030706          152 FAQKNLKYV-DIWVFMSDLHS  171 (173)
Q Consensus       152 ~~~~~~g~i-d~lVn~AG~~~  171 (173)
                      ++.+.+|++ |+||||||+..
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~  104 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQ  104 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCC
T ss_pred             HHHHHhCCCCeEEEECCCcCC
Confidence            999999999 99999999864

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.77  E-value=1.2e-18  Score=135.00  Aligned_cols=87  Identities=23%  Similarity=0.288  Sum_probs=75.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||+++++.|+++|++|++++|+.+.+++.        ...++.++.+|++|.++++++++++.+.
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTDKYTFDTAITRAEKI   84 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT--------CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh--------hcCCceEEEecCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999987654332        1125888999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        85 ~g~iD~lvnnAg~~~   99 (266)
T 3p19_A           85 YGPADAIVNNAGMML   99 (266)
T ss_dssp             HCSEEEEEECCCCCC
T ss_pred             CCCCCEEEECCCcCC
Confidence            999999999999864

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.77  E-value=3.4e-18  Score=130.63  Aligned_cols=90  Identities=28%  Similarity=0.374  Sum_probs=81.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.+|++|||||+||||++++++|+++|++|++++|+ .+..++..+++... + .++.++.+|++|+++++++++++.+.
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-G-GDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT-T-CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc-C-CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999998 77777777776554 2 36889999999999999999999999


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      +|++|+||||||+
T Consensus        83 ~g~id~vi~~Ag~   95 (258)
T 3afn_B           83 FGGIDVLINNAGG   95 (258)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            9999999999997

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.77  E-value=4e-18  Score=130.00  Aligned_cols=91  Identities=25%  Similarity=0.330  Sum_probs=80.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...   .++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc---CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999999999987766655554321   258899999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        81 ~~id~li~~Ag~~~   94 (251)
T 1zk4_A           81 GPVSTLVNNAGIAV   94 (251)
T ss_dssp             SSCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.77  E-value=5.1e-18  Score=130.03  Aligned_cols=92  Identities=23%  Similarity=0.261  Sum_probs=77.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~  155 (173)
                      +++|+++||||++|||++++++|+++|++ |++++|+.+.  +..+++.+..+..++.++.+|++|+ ++++++++++.+
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence            67899999999999999999999999996 9999998642  2334444433334788999999998 999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        81 ~~g~id~lv~~Ag~~~   96 (254)
T 1sby_A           81 QLKTVDILINGAGILD   96 (254)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             hcCCCCEEEECCccCC
Confidence            9999999999999753

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.76  E-value=5.7e-18  Score=130.45  Aligned_cols=92  Identities=22%  Similarity=0.350  Sum_probs=79.7

Q ss_pred             CCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+++|++|||||+  +|||+++++.|+++|++|++++|+.+ .++..+++....+.  +.++.+|++|+++++++++++.
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGG--ALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTC--CEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCC--cEEEECCCCCHHHHHHHHHHHH
Confidence            3678999999999  99999999999999999999999875 44455555554343  6788999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|++|+||||||+..
T Consensus        82 ~~~g~iD~lv~~Ag~~~   98 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAFAP   98 (261)
T ss_dssp             HHHSSEEEEEECCCCCC
T ss_pred             HHcCCCCEEEECCCCCC
Confidence            99999999999999864

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.76  E-value=3.2e-18  Score=133.80  Aligned_cols=89  Identities=20%  Similarity=0.329  Sum_probs=77.1

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++    + .++.++.+|++|.++++++++++ 
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~d~~~v~~~~~~~-   84 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----A-GQVEVRELDLQDLSSVRRFADGV-   84 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----S-SEEEEEECCTTCHHHHHHHHHTC-
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----c-CCeeEEEcCCCCHHHHHHHHHhc-
Confidence            34588999999999999999999999999999999999988776655443    2 37999999999999999988766 


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                         +++|+||||||+..+
T Consensus        85 ---~~iD~lv~nAg~~~~   99 (291)
T 3rd5_A           85 ---SGADVLINNAGIMAV   99 (291)
T ss_dssp             ---CCEEEEEECCCCCSC
T ss_pred             ---CCCCEEEECCcCCCC
Confidence               799999999998653

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.76  E-value=2.5e-18  Score=133.24  Aligned_cols=86  Identities=22%  Similarity=0.269  Sum_probs=74.3

Q ss_pred             CCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        74 ~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ....+++|++|||||++|||+++++.|+++|++|++++|+.+..           . ..+.++.+|++|+++++++++++
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----------~-~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----------V-NVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----------T-TSSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----------c-CceeEEEecCCCHHHHHHHHHHH
Confidence            34458899999999999999999999999999999999987543           1 13567899999999999999999


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      .+.+|++|+||||||+..
T Consensus        76 ~~~~g~iD~lv~nAg~~~   93 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIEQ   93 (269)
T ss_dssp             HHHHSCCCEEEECCCCCC
T ss_pred             HHHcCCCCEEEECCCcCC
Confidence            999999999999999865

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.76  E-value=4.6e-18  Score=130.57  Aligned_cols=87  Identities=21%  Similarity=0.269  Sum_probs=77.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +|++|||||++|||++++++|+++|  +.|++++|+.+..++..+++    + .++.++.+|++|+++++++++++.+.+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----G-DRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----G-GGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----C-CceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6899999999999999999999985  78999999988776665544    2 268899999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        77 g~id~lvnnAg~~~   90 (254)
T 3kzv_A           77 GKIDSLVANAGVLE   90 (254)
T ss_dssp             SCCCEEEEECCCCC
T ss_pred             CCccEEEECCcccC
Confidence            99999999999854

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.76  E-value=3e-18  Score=133.12  Aligned_cols=88  Identities=26%  Similarity=0.323  Sum_probs=78.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|++|||||++|||++++++|+++|++|++++|+.+..++..+++    +. ++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----PD-RAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----TT-TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cC-CceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            56899999999999999999999999999999999988776654432    32 58899999999999999999999999


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      |++|+||||||+.
T Consensus        78 g~id~lv~~Ag~~   90 (281)
T 3m1a_A           78 GRVDVLVNNAGRT   90 (281)
T ss_dssp             SCCSEEEECCCCE
T ss_pred             CCCCEEEECCCcC
Confidence            9999999999975

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.76  E-value=5.9e-18  Score=131.93  Aligned_cols=91  Identities=27%  Similarity=0.464  Sum_probs=79.7

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+|++|||||+  +|||+++++.|+++|++|++++|+.+ .++..+++....+.  +.++.+|++|+++++++++++.+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~--~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGS--DLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCC--eEEEEcCCCCHHHHHHHHHHHHH
Confidence            789999999999  99999999999999999999999875 45555666554343  67889999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        96 ~~g~iD~lv~~Ag~~~  111 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAP  111 (285)
T ss_dssp             HTSCCCEEEECCCCCC
T ss_pred             HcCCCCEEEECCCCCC
Confidence            9999999999999864

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.76  E-value=8.7e-18  Score=127.61  Aligned_cols=90  Identities=26%  Similarity=0.344  Sum_probs=79.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      +|+++||||++|||++++++|+++|++|+++ +|+.+..++..+++... +. ++.++.+|++|+++++++++++.+.+|
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GG-QAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TC-EEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CC-cEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999984 78887777776666544 32 688999999999999999999999999


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||+..
T Consensus        79 ~id~li~~Ag~~~   91 (244)
T 1edo_A           79 TIDVVVNNAGITR   91 (244)
T ss_dssp             CCSEEEECCCCCC
T ss_pred             CCCEEEECCCCCC
Confidence            9999999999865

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.76  E-value=8.4e-18  Score=127.79  Aligned_cols=90  Identities=28%  Similarity=0.352  Sum_probs=80.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-------EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~-------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      +|++|||||++|||++++++|+++|+       +|++++|+.+..++..+++... + .++.++.+|++|++++++++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-G-ALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-T-CEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc-C-CeeeEEEecCCCHHHHHHHHHH
Confidence            68999999999999999999999999       9999999988777776666543 2 3688999999999999999999


Q ss_pred             HHHhcCCccEEEEcccCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~  171 (173)
                      +.+.+|++|+||||||+..
T Consensus        80 ~~~~~g~id~li~~Ag~~~   98 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGR   98 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCC
T ss_pred             HHHhCCCCCEEEEcCCcCC
Confidence            9999999999999999864

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.76  E-value=1.5e-18  Score=133.93  Aligned_cols=84  Identities=20%  Similarity=0.260  Sum_probs=75.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||+++++.|+++|++|++++|+.+...           ..++.++.+|++|+++++++++++.+.
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999865421           125889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        94 ~g~iD~lv~nAg~~~  108 (260)
T 3un1_A           94 FGRIDSLVNNAGVFL  108 (260)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             CCCCCEEEECCCCCC
Confidence            999999999999865

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.76  E-value=5.1e-18  Score=130.94  Aligned_cols=91  Identities=20%  Similarity=0.341  Sum_probs=79.2

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+|++|||||+  +|||+++++.|+++|++|++++|+. ..++..+++....+.  ..++.+|++|+++++++++++.+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS--DIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC--cEEEEccCCCHHHHHHHHHHHHH
Confidence            678999999999  9999999999999999999999987 445555666554443  46789999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        84 ~~g~iD~lv~~Ag~~~   99 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAP   99 (265)
T ss_dssp             TCSSEEEEEECCCCCC
T ss_pred             HcCCCCEEEECCCCCC
Confidence            9999999999999864

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.75  E-value=5.1e-18  Score=130.38  Aligned_cols=86  Identities=24%  Similarity=0.352  Sum_probs=70.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+..   .++    .+ .++.++.+|++|+++++++++.+.+
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~----~~-~~~~~~~~D~~~~~~v~~~~~~~~~   76 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VAD----LG-DRARFAAADVTDEAAVASALDLAET   76 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHH----TC-TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHh----cC-CceEEEECCCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999965432   222    12 2688999999999999999998877


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                       +|++|+||||||+.
T Consensus        77 -~g~id~lv~nAg~~   90 (257)
T 3tl3_A           77 -MGTLRIVVNCAGTG   90 (257)
T ss_dssp             -HSCEEEEEECGGGS
T ss_pred             -hCCCCEEEECCCCC
Confidence             99999999999975

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.75  E-value=4.9e-18  Score=130.56  Aligned_cols=83  Identities=28%  Similarity=0.444  Sum_probs=72.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+.+|++|||||++|||++++++|+++|++|++++|+.+..+             .+.++.+|++|+++++++++++.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~~~~~~~~   83 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQAYKEIEE   83 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHHHHHHHHH
Confidence            4477899999999999999999999999999999999865432             256789999999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        84 ~~g~iD~lv~nAg~~~   99 (253)
T 2nm0_A           84 THGPVEVLIANAGVTK   99 (253)
T ss_dssp             HTCSCSEEEEECSCCT
T ss_pred             HcCCCCEEEECCCCCC
Confidence            9999999999999864

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.74  E-value=3.7e-18  Score=130.77  Aligned_cols=85  Identities=27%  Similarity=0.468  Sum_probs=76.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |+++||||++|||+++++.|+++|++|++++|+.+.+++..+++    .. ++.++.+|++|+++++++++++.+.+|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GD-NLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cC-ceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999987776655554    22 58889999999999999999999999999


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+||||||+.
T Consensus        76 D~lvnnAg~~   85 (248)
T 3asu_A           76 DILVNNAGLA   85 (248)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCcC
Confidence            9999999986

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.74  E-value=1.1e-17  Score=127.88  Aligned_cols=94  Identities=22%  Similarity=0.321  Sum_probs=80.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .|+++|++|||||++|||++++++|+++|++|+++ .++.+..++...++....  .++.++.+|++|.++++++++++.
T Consensus         3 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   80 (255)
T 3icc_A            3 SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG--GSAFSIGANLESLHGVEALYSSLD   80 (255)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC--CceEEEecCcCCHHHHHHHHHHHH
Confidence            35889999999999999999999999999999886 667777777777776543  368899999999999999999988


Q ss_pred             HhcC------CccEEEEcccCCC
Q 030706          155 KNLK------YVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g------~id~lVn~AG~~~  171 (173)
                      +.++      ++|+||||||+..
T Consensus        81 ~~~~~~~~~~~id~lv~nAg~~~  103 (255)
T 3icc_A           81 NELQNRTGSTKFDILINNAGIGP  103 (255)
T ss_dssp             HHHHHHHSSSCEEEEEECCCCCC
T ss_pred             HHhcccccCCcccEEEECCCCCC
Confidence            7764      4999999999864

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.73  E-value=1.1e-17  Score=136.67  Aligned_cols=89  Identities=17%  Similarity=0.159  Sum_probs=75.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHH------------HHHHHHHHhCCceEEEEEeeCCCHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDS------------AVQSLREEFGEQHVWGTKCDVSEGNE  145 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~------------~~~~l~~~~~~~~~~~~~~Dv~~~~~  145 (173)
                      .+|++|||||++|||+++++.|++ .|++|++++|+.+..++            ..+++... +. ++..+.+|++|+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~-G~-~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA-GL-YSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT-TC-CEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc-CC-cEEEEEecCCCHHH
Confidence            489999999999999999999999 99999999987654321            22334333 32 58889999999999


Q ss_pred             HHHHHHHHHHhc-CCccEEEEcccC
Q 030706          146 VADLVAFAQKNL-KYVDIWVFMSDL  169 (173)
Q Consensus       146 v~~~~~~~~~~~-g~id~lVn~AG~  169 (173)
                      ++++++++.+.+ |+||+||||||+
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            999999999999 999999999997

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.73  E-value=2.3e-17  Score=125.25  Aligned_cols=90  Identities=22%  Similarity=0.282  Sum_probs=78.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEE-EEeeCCCHHHHHHHHHHHHHhc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWG-TKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +|+++||||+||||++++++|+++|++|+++ +|+.+..++..+++.....  ++.+ +.+|++|.++++++++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGS--PLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTC--SCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--ceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999998 8888777777666655432  3555 8999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        79 ~~~d~li~~Ag~~~   92 (245)
T 2ph3_A           79 GGLDTLVNNAGITR   92 (245)
T ss_dssp             TCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.73  E-value=1.8e-17  Score=127.55  Aligned_cols=97  Identities=18%  Similarity=0.212  Sum_probs=78.5

Q ss_pred             CCCCCCCCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           72 VKREPMLPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        72 ~~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      ......+++|++|||||++|||++++++|+++|   ++|++++|+.+..+.. .++.....  ++.++.+|++|.+++++
T Consensus        13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~--~~~~~~~Dl~~~~~v~~   89 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHS--NIHILEIDLRNFDAYDK   89 (267)
T ss_dssp             -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCT--TEEEEECCTTCGGGHHH
T ss_pred             cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCC--ceEEEEecCCChHHHHH
Confidence            344455788999999999999999999999999   9999999987765543 44443322  58899999999999999


Q ss_pred             HHHHHHHhcC--CccEEEEcccCCC
Q 030706          149 LVAFAQKNLK--YVDIWVFMSDLHS  171 (173)
Q Consensus       149 ~~~~~~~~~g--~id~lVn~AG~~~  171 (173)
                      +++++.+.+|  ++|+||||||+..
T Consensus        90 ~~~~~~~~~g~~~id~li~~Ag~~~  114 (267)
T 1sny_A           90 LVADIEGVTKDQGLNVLFNNAGIAP  114 (267)
T ss_dssp             HHHHHHHHHGGGCCSEEEECCCCCC
T ss_pred             HHHHHHHhcCCCCccEEEECCCcCC
Confidence            9999999998  8999999999865

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.73  E-value=1.7e-17  Score=125.49  Aligned_cols=87  Identities=25%  Similarity=0.256  Sum_probs=76.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+|+++||||+||||++++++|+++|++|++++|+.+..++..+++    .  ++.++.+|++|.++++++++++.+.++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL----E--GALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----h--hceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999887665544433    2  477889999999999999999999999


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||+..
T Consensus        78 ~id~li~~Ag~~~   90 (234)
T 2ehd_A           78 ELSALVNNAGVGV   90 (234)
T ss_dssp             CCCEEEECCCCCC
T ss_pred             CCCEEEECCCcCC
Confidence            9999999999764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.73  E-value=1.5e-17  Score=128.57  Aligned_cols=81  Identities=26%  Similarity=0.363  Sum_probs=73.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|++|||||++|||+++++.|+++|++|++++|+.+.            + .++.++.+|++|.++++++++++.+.+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------E-AKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------S-CSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------C-CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999998654            1 257788999999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        73 g~iD~lv~~Ag~~~   86 (264)
T 2dtx_A           73 GSISVLVNNAGIES   86 (264)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            99999999999864

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.73  E-value=2.7e-17  Score=133.42  Aligned_cols=91  Identities=14%  Similarity=0.084  Sum_probs=76.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHH------------HHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVD------------SAVQSLREEFGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dv~~~~  144 (173)
                      ..+|++|||||++|||+++++.|++ .|++|++++++.+..+            ...+.+... +. ++..+.+|++|++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~-G~-~a~~i~~Dvtd~~  122 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK-GL-YAKSINGDAFSDE  122 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT-TC-CEEEEESCTTSHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc-CC-ceEEEECCCCCHH
Confidence            4589999999999999999999999 9999999998754322            122233333 32 5888999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      +++++++++.+.+|+||+||||||+.
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG~~  148 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLASP  148 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccc
Confidence            99999999999999999999999974

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.72  E-value=1.8e-17  Score=128.21  Aligned_cols=89  Identities=15%  Similarity=0.203  Sum_probs=76.5

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERV-DSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        78 ~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +++|++|||||  ++|||+++++.|+++|++|++++|+.+.. ++.    .+..+. ++.++.+|++|+++++++++++.
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRI----TDRLPA-KAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHH----HTTSSS-CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHH----HHhcCC-CceEEEccCCCHHHHHHHHHHHH
Confidence            67899999999  99999999999999999999999987542 332    222232 57788999999999999999999


Q ss_pred             HhcC---CccEEEEcccCCC
Q 030706          155 KNLK---YVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g---~id~lVn~AG~~~  171 (173)
                      +.+|   ++|+||||||+..
T Consensus        80 ~~~g~~~~iD~lv~nAg~~~   99 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFMP   99 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCCC
T ss_pred             HHhCCCCCceEEEECCccCc
Confidence            9999   9999999999864

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.71  E-value=3.8e-17  Score=124.05  Aligned_cols=89  Identities=17%  Similarity=0.306  Sum_probs=77.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.+..++..+ +    ...++.++.+|++|+++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I----KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C----CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c----cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999  999999999877654321 1    123688999999999999999999999


Q ss_pred             hcC--CccEEEEcccCCC
Q 030706          156 NLK--YVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g--~id~lVn~AG~~~  171 (173)
                      .+|  ++|+||||||+..
T Consensus        76 ~~g~~~id~li~~Ag~~~   93 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLL   93 (250)
T ss_dssp             HHGGGCCCEEEECCCCCC
T ss_pred             hcCCCCCcEEEECCcccC
Confidence            998  9999999999875

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.71  E-value=3.2e-17  Score=125.13  Aligned_cols=90  Identities=28%  Similarity=0.405  Sum_probs=73.5

Q ss_pred             CCCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        73 ~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .....+++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.    . ++.++.+|+++.+++++++++
T Consensus         7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~D~~~~~~~~~~~~~   81 (249)
T 3f9i_A            7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----D-NYTIEVCNLANKEECSNLISK   81 (249)
T ss_dssp             --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----S-SEEEEECCTTSHHHHHHHHHT
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----c-CccEEEcCCCCHHHHHHHHHh
Confidence            33455889999999999999999999999999999999999887776655542    2 588889999999998887754


Q ss_pred             HHHhcCCccEEEEcccCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~  171 (173)
                          ++++|+||||||+..
T Consensus        82 ----~~~id~li~~Ag~~~   96 (249)
T 3f9i_A           82 ----TSNLDILVCNAGITS   96 (249)
T ss_dssp             ----CSCCSEEEECCC---
T ss_pred             ----cCCCCEEEECCCCCC
Confidence                478999999999865

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.71  E-value=6.9e-17  Score=123.66  Aligned_cols=83  Identities=27%  Similarity=0.312  Sum_probs=73.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+.         .. .  .+.++.+|++|+++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~-~--~~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQ-Y--PFATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SC-C--SSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hc-C--CceEEEcCCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999998652         01 1  2667889999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        72 ~g~id~lv~~Ag~~~   86 (250)
T 2fwm_X           72 TERLDALVNAAGILR   86 (250)
T ss_dssp             CSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999864

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.71  E-value=2.4e-17  Score=125.53  Aligned_cols=83  Identities=16%  Similarity=0.024  Sum_probs=72.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.++|++|||||++|||++++++|+++|++|++++|+.+..+            ....++.+|++|+++++++++++.+.
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~   71 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKL   71 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999875432            13567899999999999999999999


Q ss_pred             c--CCccEEEEcccCCC
Q 030706          157 L--KYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~--g~id~lVn~AG~~~  171 (173)
                      +  |++|+||||||+..
T Consensus        72 ~~~g~iD~lv~~Ag~~~   88 (241)
T 1dhr_A           72 LGDQKVDAILCVAGGWA   88 (241)
T ss_dssp             HTTCCEEEEEECCCCCC
T ss_pred             hCCCCCCEEEEcccccC
Confidence            9  79999999999864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.71  E-value=1.9e-17  Score=126.67  Aligned_cols=82  Identities=23%  Similarity=0.422  Sum_probs=72.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+..++             +..+.+|++|+++++++++++.+.
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~~~~   78 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAVEEH   78 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHHHHH
Confidence            3778999999999999999999999999999999998654321             124789999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        79 ~g~id~lv~~Ag~~~   93 (247)
T 1uzm_A           79 QGPVEVLVSNAGLSA   93 (247)
T ss_dssp             HSSCSEEEEECSCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.70  E-value=1.1e-16  Score=127.13  Aligned_cols=90  Identities=22%  Similarity=0.286  Sum_probs=76.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec---------ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR---------SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVA  147 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~  147 (173)
                      .+.+|++|||||++|||+++++.|+++|++|+++++         +.+..++..+++....+  .   ..+|++|.++++
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~--~---~~~D~~~~~~~~   80 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG--K---AVANYDSVEAGE   80 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC--E---EEEECCCGGGHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC--e---EEEeCCCHHHHH
Confidence            478999999999999999999999999999999754         56666777777765432  2   247999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccCCC
Q 030706          148 DLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       148 ~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++++++.+.+|++|+||||||+..
T Consensus        81 ~~~~~~~~~~g~iD~lVnnAG~~~  104 (319)
T 1gz6_A           81 KLVKTALDTFGRIDVVVNNAGILR  104 (319)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999999865

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.70  E-value=2.8e-17  Score=127.24  Aligned_cols=83  Identities=23%  Similarity=0.232  Sum_probs=72.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+.+|++|||||++|||+++++.|+++|++|++++|+.+..+             ....+.+|++|.++++++++++.+
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~~~~   90 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGAVAA   90 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999865421             123458899999999999999999


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+|++|+||||||+..
T Consensus        91 ~~g~iD~lvnnAg~~~  106 (266)
T 3uxy_A           91 GLGRLDIVVNNAGVIS  106 (266)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             hcCCCCEEEECCCCCC
Confidence            9999999999999875

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.69  E-value=1.3e-16  Score=130.74  Aligned_cols=92  Identities=16%  Similarity=0.234  Sum_probs=76.4

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHcCCEEEEEecChhhH-----------HHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706           78 LPPYNVLITGSTKGIGYA--LAKEFLKAGDNVIICSRSAERV-----------DSAVQSLREEFGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~a--ia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~l~~~~~~~~~~~~~~Dv~~~~  144 (173)
                      ..+|++|||||++|||++  +++.|++.|++|++++|+....           .+...++....+. ++.++.+|++|.+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGL-VAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTC-CEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCC-cEEEEEeeCCCHH
Confidence            578999999999999999  9999999999999999865431           1223333233333 6889999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      +++++++++.+.+|+||+||||||+.
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCccc
Confidence            99999999999999999999999974

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.69  E-value=9e-17  Score=123.13  Aligned_cols=80  Identities=18%  Similarity=0.123  Sum_probs=70.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+|++|||||++|||++++++|+++|++|++++|+.+..+              ...+.+|++|.++++++++++.+.+
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999876421              1246789999999999999999999


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |++|+||||||+..
T Consensus        86 g~iD~li~~Ag~~~   99 (251)
T 3orf_A           86 IKVDTFVCAAGGWS   99 (251)
T ss_dssp             CCEEEEEECCCCCC
T ss_pred             CCCCEEEECCccCC
Confidence            99999999999854

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.69  E-value=4.1e-17  Score=123.73  Aligned_cols=82  Identities=16%  Similarity=0.131  Sum_probs=72.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+            ....++.+|++|+++++++++++.+.+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999999876421            135678899999999999999999999


Q ss_pred             --CCccEEEEcccCCC
Q 030706          158 --KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 --g~id~lVn~AG~~~  171 (173)
                        |++|+||||||+..
T Consensus        69 ~~g~id~lv~~Ag~~~   84 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWA   84 (236)
T ss_dssp             TTCCEEEEEECCCCCC
T ss_pred             CCCCCCEEEECCcccC
Confidence              79999999999764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.69  E-value=8.5e-17  Score=122.79  Aligned_cols=83  Identities=17%  Similarity=0.271  Sum_probs=69.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||++|||+++++.|+++|++|++++|+.+..++.. ++    .  ++.++.+|++|+++++    ++.+.+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~--~~~~~~~D~~~~~~~~----~~~~~~   72 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----P--GIQTRVLDVTKKKQID----QFANEV   72 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----T--TEEEEECCTTCHHHHH----HHHHHC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----c--CceEEEeeCCCHHHHH----HHHHHh
Confidence            67899999999999999999999999999999999876544332 11    1  4788899999999988    445567


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        73 ~~id~lv~~Ag~~~   86 (246)
T 2ag5_A           73 ERLDVLFNVAGFVH   86 (246)
T ss_dssp             SCCSEEEECCCCCC
T ss_pred             CCCCEEEECCccCC
Confidence            89999999999864

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.69  E-value=3.1e-16  Score=129.97  Aligned_cols=91  Identities=21%  Similarity=0.323  Sum_probs=75.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||++++++|+++|++|++++|+... ++. .++....+   +.++.+|++|.++++++++++.+.
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l-~~~~~~~~---~~~~~~Dvtd~~~v~~~~~~~~~~  284 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDL-KRVADKVG---GTALTLDVTADDAVDKITAHVTEH  284 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHH-HHHHHHHT---CEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHH-HHHHHHcC---CeEEEEecCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999986432 222 22222222   457899999999999999999999


Q ss_pred             cCC-ccEEEEcccCCCC
Q 030706          157 LKY-VDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~-id~lVn~AG~~~~  172 (173)
                      +|+ ||+||||||+...
T Consensus       285 ~g~~id~lV~nAGv~~~  301 (454)
T 3u0b_A          285 HGGKVDILVNNAGITRD  301 (454)
T ss_dssp             STTCCSEEEECCCCCCC
T ss_pred             cCCCceEEEECCcccCC
Confidence            986 9999999998753

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.68  E-value=2.2e-16  Score=119.93  Aligned_cols=85  Identities=24%  Similarity=0.310  Sum_probs=71.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++    .  .+.++.+|++|+++++++++    .
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~----~   73 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----P--GIEPVCVDLGDWEATERALG----S   73 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHT----T
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C--CCCEEEEeCCCHHHHHHHHH----H
Confidence            478999999999999999999999999999999999987665544332    2  24556899999999988876    5


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        74 ~~~id~vi~~Ag~~~   88 (244)
T 3d3w_A           74 VGPVDLLVNNAAVAL   88 (244)
T ss_dssp             CCCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCccCC
Confidence            689999999999864

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.68  E-value=2.6e-16  Score=119.60  Aligned_cols=81  Identities=31%  Similarity=0.439  Sum_probs=71.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|+++||||++|||+++++.|+++|++|++++|+.+.   ..+++    +   +.++.+|++| ++++++++++.+.+|+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~----~---~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL----G---AVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH----T---CEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh----C---cEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999998765   22222    2   5678999999 9999999999999999


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||+..
T Consensus        71 id~lv~~Ag~~~   82 (239)
T 2ekp_A           71 LHVLVHAAAVNV   82 (239)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            999999999864

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.67  E-value=3.1e-16  Score=118.96  Aligned_cols=85  Identities=20%  Similarity=0.259  Sum_probs=70.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||+||||++++++|+++|++|++++|+.+..++..+++    .  .+.++.+|++|+++++++++    .
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~----~   73 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----P--GIEPVCVDLGDWDATEKALG----G   73 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHT----T
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----c--CCCcEEecCCCHHHHHHHHH----H
Confidence            377899999999999999999999999999999999887665544321    2  24556999999999988876    5


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        74 ~~~id~vi~~Ag~~~   88 (244)
T 1cyd_A           74 IGPVDLLVNNAALVI   88 (244)
T ss_dssp             CCCCSEEEECCCCCC
T ss_pred             cCCCCEEEECCcccC
Confidence            789999999999764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.67  E-value=8.8e-17  Score=137.64  Aligned_cols=96  Identities=23%  Similarity=0.260  Sum_probs=66.9

Q ss_pred             CCCCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec---------ChhhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           72 VKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR---------SAERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        72 ~~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      ......++||++|||||++|||+++|+.|+++|++|++++|         +.+..++..+++......  +   .+|++|
T Consensus        11 ~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~--~---~~D~~d   85 (613)
T 3oml_A           11 SDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE--A---VADYNS   85 (613)
T ss_dssp             ----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC--E---EECCCC
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe--E---EEEeCC
Confidence            34445689999999999999999999999999999999988         666677777777665432  2   479999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcccCCCC
Q 030706          143 GNEVADLVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       143 ~~~v~~~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      .++++++++++.+.+|+||+||||||+...
T Consensus        86 ~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~  115 (613)
T 3oml_A           86 VIDGAKVIETAIKAFGRVDILVNNAGILRD  115 (613)
T ss_dssp             GGGHHHHHC----------CEECCCCCCCC
T ss_pred             HHHHHHHHHHHHHHCCCCcEEEECCCCCCC
Confidence            999999999999999999999999998753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.67  E-value=2.4e-16  Score=134.66  Aligned_cols=90  Identities=22%  Similarity=0.270  Sum_probs=75.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh---------hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVA  147 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~  147 (173)
                      .+.+|++|||||++|||+++++.|+++|++|++++++.         +.+++..+++...++  ++   .+|++|.++++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~--~~---~~d~~d~~~~~   79 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG--VA---VADYNNVLDGD   79 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC--EE---EEECCCTTCHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC--eE---EEEcCCHHHHH
Confidence            37899999999999999999999999999999998764         556666677655432  22   36999998999


Q ss_pred             HHHHHHHHhcCCccEEEEcccCCC
Q 030706          148 DLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       148 ~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++++++.+.+|+||+||||||+..
T Consensus        80 ~~v~~~~~~~G~iDiLVnNAGi~~  103 (604)
T 2et6_A           80 KIVETAVKNFGTVHVIINNAGILR  103 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999999864

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.66  E-value=2.1e-16  Score=133.06  Aligned_cols=92  Identities=16%  Similarity=0.222  Sum_probs=77.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEE-ecCh-------------hhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIIC-SRSA-------------ERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~-~r~~-------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      -++|++|||||++|||++++++|+++|++ |+++ +|+.             +..++..+++...+.  ++.++.+|++|
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~v~~~~~Dvtd  326 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGA--TATVVTCDLTD  326 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTC--EEEEEECCTTS
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCC--EEEEEECCCCC
Confidence            46899999999999999999999999986 7777 8873             445666677765533  69999999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcccCCCC
Q 030706          143 GNEVADLVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       143 ~~~v~~~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      .++++++++++. ++|+||+||||||+...
T Consensus       327 ~~~v~~~~~~i~-~~g~id~vVh~AGv~~~  355 (525)
T 3qp9_A          327 AEAAARLLAGVS-DAHPLSAVLHLPPTVDS  355 (525)
T ss_dssp             HHHHHHHHHTSC-TTSCEEEEEECCCCCCC
T ss_pred             HHHHHHHHHHHH-hcCCCcEEEECCcCCCC
Confidence            999999999988 78999999999998753

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.66  E-value=1.3e-16  Score=120.52  Aligned_cols=83  Identities=22%  Similarity=0.267  Sum_probs=70.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++    + .++.++.+|++|.++++++++++.+.   +
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~v~~~~~~~~~~---~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----S-NNVGYRARDLASHQEVEQLFEQLDSI---P   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----S-SCCCEEECCTTCHHHHHHHHHSCSSC---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----h-hccCeEeecCCCHHHHHHHHHHHhhc---C
Confidence            68999999999999999999999999999999988776655544    2 25788999999999999998876543   4


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+||||||+..
T Consensus        74 d~lv~~Ag~~~   84 (230)
T 3guy_A           74 STVVHSAGSGY   84 (230)
T ss_dssp             SEEEECCCCCC
T ss_pred             CEEEEeCCcCC
Confidence            99999999864

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.65  E-value=2.3e-16  Score=125.53  Aligned_cols=91  Identities=20%  Similarity=0.154  Sum_probs=72.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh----CCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF----GEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+|++|||||++|||++++++|+++|++|++++|+....++..+.+....    ...++.++.+|++|.++++++++++ 
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV-   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence            36899999999999999999999999999888876544433333332221    1236889999999999999999987 


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                       .+|++|+||||||+..
T Consensus        80 -~~g~iD~lVnnAG~~~   95 (327)
T 1jtv_A           80 -TEGRVDVLVCNAGLGL   95 (327)
T ss_dssp             -TTSCCSEEEECCCCCC
T ss_pred             -hcCCCCEEEECCCcCC
Confidence             3589999999999863

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.64  E-value=8.9e-16  Score=131.21  Aligned_cols=89  Identities=25%  Similarity=0.385  Sum_probs=73.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|++|||||++|||+++++.|+++|++|+++++..  .++..+++... +. ++..+.+|++  ++.+++++++.++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~-g~-~~~~~~~Dv~--~~~~~~~~~~~~~  392 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA-GG-EAWPDQHDVA--KDSEAIIKNVIDK  392 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT-TC-EEEEECCCHH--HHHHHHHHHHHHH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc-CC-eEEEEEcChH--HHHHHHHHHHHHh
Confidence            47899999999999999999999999999999998632  34555666543 32 5777778873  5567889999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|+||+||||||+..
T Consensus       393 ~G~iDiLVnNAGi~~  407 (604)
T 2et6_A          393 YGTIDILVNNAGILR  407 (604)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            999999999999864

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.63  E-value=2.1e-15  Score=140.07  Aligned_cols=95  Identities=24%  Similarity=0.385  Sum_probs=82.1

Q ss_pred             CCCCCEEEEEcCCch-HHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhC--CceEEEEEeeCCCHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFG--EQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        77 ~~~~k~~lItGa~~g-IG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .+.+|++|||||++| ||+++++.|++.|++|+++ +|+.+..++..+++....+  +.++.++.+|++|.+++++++++
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            478999999999998 9999999999999999998 5777777777676654432  23789999999999999999999


Q ss_pred             HHHh-----cC-CccEEEEcccCCC
Q 030706          153 AQKN-----LK-YVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~-----~g-~id~lVn~AG~~~  171 (173)
                      +.+.     +| +||+||||||+..
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~  776 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPE  776 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCC
T ss_pred             HHHhccccccCCCCeEEEECCCcCC
Confidence            9988     66 9999999999864

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.63  E-value=1e-15  Score=127.94  Aligned_cols=88  Identities=22%  Similarity=0.285  Sum_probs=75.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh---hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +|++|||||+||||++++++|+++|+ +|++++|+.   +..++..+++...+  .++.++.||++|.++++++++++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g--~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLG--VRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999998 899999964   33556666666543  3799999999999999999999877


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                      . ++||+||||||+.
T Consensus       317 ~-g~ld~vVh~AGv~  330 (496)
T 3mje_A          317 D-APLTAVFHSAGVA  330 (496)
T ss_dssp             T-SCEEEEEECCCCC
T ss_pred             h-CCCeEEEECCccc
Confidence            6 7999999999987

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.63  E-value=2.5e-15  Score=139.29  Aligned_cols=95  Identities=21%  Similarity=0.320  Sum_probs=81.2

Q ss_pred             CCCCCEEEEEcCCch-HHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhC--CceEEEEEeeCCCHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFG--EQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        77 ~~~~k~~lItGa~~g-IG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .+.+|++|||||++| ||++++++|+++|++|++++ |+.+..++..+++.....  +.++.++.+|++|.+++++++++
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            478999999999999 99999999999999999995 666666666666644332  23789999999999999999999


Q ss_pred             HHHh---cC-CccEEEEcccCCC
Q 030706          153 AQKN---LK-YVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~---~g-~id~lVn~AG~~~  171 (173)
                      +.+.   +| +||+||||||+..
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~  751 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPE  751 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCC
T ss_pred             HHHhhcccCCCCcEEEeCccccc
Confidence            9988   89 9999999999864

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.63  E-value=8.8e-16  Score=117.01  Aligned_cols=80  Identities=20%  Similarity=0.235  Sum_probs=67.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++|++|||||++|||+++++.|++ .|++|++++|+.+..            ...+.++.+|++|+++++++++.+ + 
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~-~-   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS------------AENLKFIKADLTKQQDITNVLDII-K-   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC------------CTTEEEEECCTTCHHHHHHHHHHT-T-
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc------------cccceEEecCcCCHHHHHHHHHHH-H-
Confidence            4578999999999999999999999 789999999876421            124788999999999999999554 3 


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        68 ~~~id~lv~nAg~~~   82 (244)
T 4e4y_A           68 NVSFDGIFLNAGILI   82 (244)
T ss_dssp             TCCEEEEEECCCCCC
T ss_pred             hCCCCEEEECCccCC
Confidence            789999999999864

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.62  E-value=9.3e-16  Score=116.00  Aligned_cols=77  Identities=22%  Similarity=0.203  Sum_probs=69.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .             .++.++.+|++|+++++++++++ +.+++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence            689999999999999999999999999999999864 1             13577899999999999999999 88899


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||+..
T Consensus        67 ~d~li~~ag~~~   78 (242)
T 1uay_A           67 LFAVVSAAGVGL   78 (242)
T ss_dssp             EEEEEECCCCCC
T ss_pred             ceEEEEcccccC
Confidence            999999999864

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.62  E-value=1e-15  Score=147.47  Aligned_cols=90  Identities=16%  Similarity=0.270  Sum_probs=77.8

Q ss_pred             CCCCEEEEEcCCch-HHHHHHHHHHHcCCEEEEEecChhh-----HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKG-IGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        78 ~~~k~~lItGa~~g-IG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      +.||++|||||++| ||+++|+.|+++|++|++++|+.+.     +++..+++... + .++.++.+|++|+++++++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~-G-~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF-D-ATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT-T-CEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc-C-CeEEEEEecCCCHHHHHHHHH
Confidence            78999999999999 9999999999999999999998765     33344433222 2 368889999999999999999


Q ss_pred             HHHH----hcCCccEEEEcccC
Q 030706          152 FAQK----NLKYVDIWVFMSDL  169 (173)
Q Consensus       152 ~~~~----~~g~id~lVn~AG~  169 (173)
                      ++.+    .+|+||+||||||+
T Consensus      2212 ~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2212 WVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HHTSCCEEEESSSEEEECCCCC
T ss_pred             HHHhhhhhhcCCCCEEEECCCc
Confidence            9998    89999999999998

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.61  E-value=1.1e-15  Score=115.02  Aligned_cols=68  Identities=22%  Similarity=0.210  Sum_probs=61.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+                      +|++|+++++++++++   
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~---   57 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI---   57 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH---
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh---
Confidence            367899999999999999999999999999999998753                      7999999999988754   


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                       |++|+||||||+.
T Consensus        58 -g~id~lv~nAg~~   70 (223)
T 3uce_A           58 -GAFDHLIVTAGSY   70 (223)
T ss_dssp             -CSEEEEEECCCCC
T ss_pred             -CCCCEEEECCCCC
Confidence             8999999999986

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.61  E-value=9.9e-16  Score=117.44  Aligned_cols=82  Identities=18%  Similarity=0.161  Sum_probs=69.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |++|||||++|||+++++.|+++|++|++++|+.+..++..+ +.....  ++.++     |.++++++++++.+.+|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~--~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYP--QLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCT--TSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCC--cEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999998877766554 544332  23332     7778999999999999999


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+||||||+.
T Consensus        74 D~lv~nAg~~   83 (254)
T 1zmt_A           74 DVLVSNDIFA   83 (254)
T ss_dssp             CEEEEECCCC
T ss_pred             CEEEECCCcC
Confidence            9999999986

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.61  E-value=1e-14  Score=117.53  Aligned_cols=91  Identities=20%  Similarity=0.080  Sum_probs=76.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HcCCEEEEEecChhh------------HHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSAER------------VDSAVQSLREEFGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~-~~G~~V~~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~Dv~~~~  144 (173)
                      ..+|++||||+++|||++++..|+ ..|+.++++++..+.            .....+.+++.+.  +...+.||++|.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~--~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGL--YSVTIDGDAFSDE  125 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTC--CEEEEESCTTSHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCC--CceeEeCCCCCHH
Confidence            567999999999999999999999 679999988875432            2233444444444  5889999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      +++++++++.+++|+||+||||+|..
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccc
Confidence            99999999999999999999999975

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.60  E-value=3.1e-15  Score=124.91  Aligned_cols=91  Identities=23%  Similarity=0.324  Sum_probs=77.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChh---hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAE---RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ..++++|||||+||||++++++|+++|+ +|++++|+..   ..++..+++... + .++.++.+|++|.++++++++++
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g-~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-G-ARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-T-CEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc-C-CEEEEEEeCCCCHHHHHHHHHHH
Confidence            4678999999999999999999999998 5999999864   345555666543 3 36899999999999999999998


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                       +.++++|+||||||+..
T Consensus       302 -~~~g~ld~VIh~AG~~~  318 (486)
T 2fr1_A          302 -GDDVPLSAVFHAAATLD  318 (486)
T ss_dssp             -CTTSCEEEEEECCCCCC
T ss_pred             -HhcCCCcEEEECCccCC
Confidence             66789999999999865

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.60  E-value=2.6e-15  Score=131.79  Aligned_cols=92  Identities=22%  Similarity=0.287  Sum_probs=79.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HcCC-EEEEEecCh---hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFL-KAGD-NVIICSRSA---ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~-~~G~-~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      -.+|++|||||++|||++++++|+ ++|+ +|++++|+.   +..++..+++...+  .++.++.||++|++++++++++
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G--~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYG--AEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcC--CcEEEEEeecCCHHHHHHHHHH
Confidence            468999999999999999999999 7898 599999983   45666777776543  3799999999999999999999


Q ss_pred             HHHhcCCccEEEEcccCCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~~  172 (173)
                      +.+.+ +||+||||||+...
T Consensus       606 ~~~~~-~id~lVnnAGv~~~  624 (795)
T 3slk_A          606 IPDEH-PLTAVVHAAGVLDD  624 (795)
T ss_dssp             SCTTS-CEEEEEECCCCCCC
T ss_pred             HHHhC-CCEEEEECCCcCCC
Confidence            88776 99999999999754

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.60  E-value=1.3e-15  Score=138.26  Aligned_cols=96  Identities=24%  Similarity=0.375  Sum_probs=80.7

Q ss_pred             CCCCCCEEEEEcCCch-HHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhC--CceEEEEEeeCCCHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFG--EQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        76 ~~~~~k~~lItGa~~g-IG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      +.+.+|++|||||++| ||+++++.|+++|++|+++ +|+.+..++..+++....+  +.++.++.+|++|.++++++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            4478999999999998 9999999999999999998 5766666666565533321  2378999999999999999999


Q ss_pred             HHHHh-----cC-CccEEEEcccCCC
Q 030706          152 FAQKN-----LK-YVDIWVFMSDLHS  171 (173)
Q Consensus       152 ~~~~~-----~g-~id~lVn~AG~~~  171 (173)
                      ++.+.     +| +||+||||||+..
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~  577 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPE  577 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCC
Confidence            99988     77 9999999999864

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.59  E-value=3e-16  Score=124.81  Aligned_cols=92  Identities=15%  Similarity=0.132  Sum_probs=70.5

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChh---------hHHHHHHHHHH-HhCCceEEEEEeeCCCH--H
Q 030706           79 PPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAE---------RVDSAVQSLRE-EFGEQHVWGTKCDVSEG--N  144 (173)
Q Consensus        79 ~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~---------~~~~~~~~l~~-~~~~~~~~~~~~Dv~~~--~  144 (173)
                      .+|++||||+++  |||+++|++|+++|++|+++++++.         ..+........ ......+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            368999999975  9999999999999999998887652         11111111100 00112478889999988  8


Q ss_pred             ------------------HHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          145 ------------------EVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       145 ------------------~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                                        +++++++++.+.+|+||+||||||+.
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~  124 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANA  124 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCccc
Confidence                              99999999999999999999999974

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.58  E-value=9.1e-15  Score=115.76  Aligned_cols=88  Identities=20%  Similarity=0.249  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..++++|||||+|+||+++++.|+++|++|++++|+.+...+..+.+....+. ++.++.+|++|.+++++++++     
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~-----   76 (341)
T 3enk_A            3 STKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGK-TPAFHETDVSDERALARIFDA-----   76 (341)
T ss_dssp             CSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSC-CCEEECCCTTCHHHHHHHHHH-----
T ss_pred             CCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCC-CceEEEeecCCHHHHHHHHhc-----
Confidence            45689999999999999999999999999999999876666666666554443 588899999999999998876     


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||+..
T Consensus        77 ~~~d~vih~A~~~~   90 (341)
T 3enk_A           77 HPITAAIHFAALKA   90 (341)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             cCCcEEEECccccc
Confidence            48999999999763

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.58  E-value=3.8e-16  Score=119.04  Aligned_cols=86  Identities=21%  Similarity=0.242  Sum_probs=64.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||++|||+++++.|++ |++|++++|+.+..++..+     .  .++.++.+|+++.++ .+.+.+..+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~--~~~~~~~~D~~~~~~-~~~~~~~~~~   72 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----I--EGVEPIESDIVKEVL-EEGGVDKLKN   72 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----S--TTEEEEECCHHHHHH-TSSSCGGGTT
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----h--cCCcceecccchHHH-HHHHHHHHHh
Confidence            36789999999999999999999998 9999999998876554332     1  248889999998876 4455555677


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||||+..
T Consensus        73 ~~~id~lv~~Ag~~~   87 (245)
T 3e9n_A           73 LDHVDTLVHAAAVAR   87 (245)
T ss_dssp             CSCCSEEEECC----
T ss_pred             cCCCCEEEECCCcCC
Confidence            899999999999864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.57  E-value=1.9e-15  Score=115.22  Aligned_cols=81  Identities=14%  Similarity=0.019  Sum_probs=67.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-e--cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC-S--RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +|++|||||++|||+++++.|+++|++|+++ +  |+.+..++..+++    ..       .|+.|.++++++++++.+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~~-------~~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----PG-------TIALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----TT-------EEECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----CC-------CcccCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9887766655443    11       2344788899999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        70 ~g~iD~lv~~Ag~~~   84 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPR   84 (244)
T ss_dssp             SSCEEEEEECCCCCT
T ss_pred             cCCCCEEEECCCcCC
Confidence            999999999999864

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.55  E-value=9.4e-15  Score=115.50  Aligned_cols=94  Identities=19%  Similarity=0.245  Sum_probs=63.5

Q ss_pred             CCCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecCh-----------hhHH-----------HHHHHHHHHhCC-c
Q 030706           77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSA-----------ERVD-----------SAVQSLREEFGE-Q  131 (173)
Q Consensus        77 ~~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~-----------~~~~-----------~~~~~l~~~~~~-~  131 (173)
                      .+.+|++|||||  ++|||+++++.|+++|++|++++|++           +.++           +..+++...... .
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            378999999999  89999999999999999999998753           1111           112222221110 0


Q ss_pred             eEEEEEee------------CCC--------HHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          132 HVWGTKCD------------VSE--------GNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       132 ~~~~~~~D------------v~~--------~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      ...++.+|            ++|        +++++++++++.+.+|+||+||||||+.
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~  144 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANG  144 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECC
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence            01333333            333        4589999999999999999999999975

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.55  E-value=4e-14  Score=118.84  Aligned_cols=87  Identities=28%  Similarity=0.394  Sum_probs=73.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChh---hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAE---RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ..+|++|||||+||||++++++|+++|+ +|++++|+..   ..++..+++... + .++.++.+|++|.+++++++++ 
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g-~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH-G-CEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT-T-CEEEEEECCSSCHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc-C-CEEEEEEeCCCCHHHHHHHHhc-
Confidence            4578999999999999999999999998 6999999864   345556666543 2 3699999999999999998876 


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                          +++|+||||||+..
T Consensus       334 ----~~ld~VVh~AGv~~  347 (511)
T 2z5l_A          334 ----YPPNAVFHTAGILD  347 (511)
T ss_dssp             ----SCCSEEEECCCCCC
T ss_pred             ----CCCcEEEECCcccC
Confidence                68999999999865

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.55  E-value=7.5e-15  Score=115.95  Aligned_cols=94  Identities=19%  Similarity=0.268  Sum_probs=66.6

Q ss_pred             CCCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhh------HH-HHHHHHHHH-hCCc--eEEEEEee-----
Q 030706           77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAER------VD-SAVQSLREE-FGEQ--HVWGTKCD-----  139 (173)
Q Consensus        77 ~~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~~~------~~-~~~~~l~~~-~~~~--~~~~~~~D-----  139 (173)
                      .+.+|++|||||  ++|||+++++.|+++|++|++++|++..      .+ ...+++... .+..  .+.++.+|     
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            378999999999  8999999999999999999999986410      00 011111111 0110  01233333     


Q ss_pred             -------CC--------CHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          140 -------VS--------EGNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       140 -------v~--------~~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                             ++        |+++++++++++.+.+|++|+||||||+.
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~  131 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANG  131 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence                   33        36689999999999999999999999975

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.55  E-value=1.6e-14  Score=110.55  Aligned_cols=80  Identities=30%  Similarity=0.460  Sum_probs=63.2

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ...+++|++|||||++|||+++++.|+++|++|++++|+.+..    +++    +  ++.++ +|+  .++++++++++ 
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~----~--~~~~~-~D~--~~~~~~~~~~~-   79 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS----G--HRYVV-CDL--RKDLDLLFEKV-   79 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT----C--SEEEE-CCT--TTCHHHHHHHS-
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh----C--CeEEE-eeH--HHHHHHHHHHh-
Confidence            3448899999999999999999999999999999999987322    111    2  46667 999  55677776654 


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                         .++|+||||||+..
T Consensus        80 ---~~iD~lv~~Ag~~~   93 (249)
T 1o5i_A           80 ---KEVDILVLNAGGPK   93 (249)
T ss_dssp             ---CCCSEEEECCCCCC
T ss_pred             ---cCCCEEEECCCCCC
Confidence               38999999999764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.55  E-value=1.5e-14  Score=106.94  Aligned_cols=78  Identities=23%  Similarity=0.344  Sum_probs=66.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |+++||||+||||++++++|+++  +|++++|+.+..++..+++    ..   .++.+|++|++++++++++    +|++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~----~~---~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV----GA---RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH----TC---EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc----cC---cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            57999999999999999999998  9999999887766554443    21   6778999999999999876    6899


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+||||||+..
T Consensus        68 d~vi~~ag~~~   78 (207)
T 2yut_A           68 DLLVHAVGKAG   78 (207)
T ss_dssp             EEEEECCCCCC
T ss_pred             CEEEECCCcCC
Confidence            99999999864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.52  E-value=8e-15  Score=114.69  Aligned_cols=95  Identities=19%  Similarity=0.177  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHH-------HHHHHHHHH-hCC--ceEEEEEee----
Q 030706           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVD-------SAVQSLREE-FGE--QHVWGTKCD----  139 (173)
Q Consensus        76 ~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~~~l~~~-~~~--~~~~~~~~D----  139 (173)
                      +.+++|++|||||+  +|||+++++.|+++|++|++++|++....       +..+++... .+.  .....+.+|    
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            34789999999999  99999999999999999999987532110       000011000 010  012334443    


Q ss_pred             ----CC------------CHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          140 ----VS------------EGNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       140 ----v~------------~~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                          ++            ++++++++++++.+.+|++|+||||||+.
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~  130 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANG  130 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence                32            26789999999999999999999999974

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.52  E-value=2.2e-14  Score=108.33  Aligned_cols=81  Identities=14%  Similarity=0.133  Sum_probs=62.1

Q ss_pred             CCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceE-EEEEeeCCCHHHHHHHHHH
Q 030706           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV-WGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        74 ~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dv~~~~~v~~~~~~  152 (173)
                      ....+++|+++||||+|+||+++++.|+++|++|++++|+.+..++...    .    .+ .++.+|++         +.
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~----~~~~~~~~Dl~---------~~   77 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R----GASDIVVANLE---------ED   77 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T----TCSEEEECCTT---------SC
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C----CCceEEEcccH---------HH
Confidence            3345889999999999999999999999999999999999877554322    1    36 78899998         23


Q ss_pred             HHHhcCCccEEEEcccCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~  171 (173)
                      +.+.++++|+||||||...
T Consensus        78 ~~~~~~~~D~vi~~ag~~~   96 (236)
T 3e8x_A           78 FSHAFASIDAVVFAAGSGP   96 (236)
T ss_dssp             CGGGGTTCSEEEECCCCCT
T ss_pred             HHHHHcCCCEEEECCCCCC
Confidence            3445578999999999864

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.51  E-value=1.3e-14  Score=111.84  Aligned_cols=75  Identities=17%  Similarity=0.255  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++|++|||||+||||+++++.|+++|++|++++|++....           ..++.++.+|++|.++++++++       
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA-------   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc-------
Confidence            4689999999999999999999999999999999875432           1258899999999999988875       


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||+..
T Consensus        64 ~~D~vi~~Ag~~~   76 (267)
T 3rft_A           64 GCDGIVHLGGISV   76 (267)
T ss_dssp             TCSEEEECCSCCS
T ss_pred             CCCEEEECCCCcC
Confidence            6899999999853

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.51  E-value=7.5e-14  Score=102.97  Aligned_cols=66  Identities=17%  Similarity=0.274  Sum_probs=59.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+||||++++++|+ +|++|++++|+.+                   ++.+|++|+++++++++++    |++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~~~d   60 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV----GKVD   60 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH----CCEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh----CCCC
Confidence            79999999999999999999 9999999999763                   3579999999999988765    7899


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +||||||+..
T Consensus        61 ~vi~~ag~~~   70 (202)
T 3d7l_A           61 AIVSATGSAT   70 (202)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECCCCCC
Confidence            9999999764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.50  E-value=8.5e-14  Score=110.00  Aligned_cols=85  Identities=24%  Similarity=0.104  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++|++|||||+|+||.++++.|+++|++|++++|+.+..+.  ..+.......++.++.+|++|.++++++++.+     
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc-----
Confidence            57899999999999999999999999999999998654321  12222212225888899999999999988776     


Q ss_pred             CccEEEEcccCC
Q 030706          159 YVDIWVFMSDLH  170 (173)
Q Consensus       159 ~id~lVn~AG~~  170 (173)
                      ++|+||||||..
T Consensus        75 ~~d~vih~A~~~   86 (345)
T 2z1m_A           75 QPDEVYNLAAQS   86 (345)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCc
Confidence            799999999975

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.49  E-value=6e-15  Score=112.76  Aligned_cols=73  Identities=23%  Similarity=0.253  Sum_probs=61.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |++|||||++|||+++++.|+++|++|++++|+.+..+.               .+.+|++|.++++++++++   ++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------------DLSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------------ccccCCCCHHHHHHHHHHh---CCCC
Confidence            689999999999999999999999999999998754211               1578999999988887633   3899


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+||||||+..
T Consensus        64 d~lv~~Ag~~~   74 (257)
T 1fjh_A           64 DGLVLCAGLGP   74 (257)
T ss_dssp             SEEEECCCCCT
T ss_pred             CEEEECCCCCC
Confidence            99999999865

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.48  E-value=7.3e-14  Score=110.53  Aligned_cols=86  Identities=14%  Similarity=0.146  Sum_probs=69.3

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ...+.++++|||||+|+||.++++.|+++|++|++++|+.....+....+      .++.++.+|++|.++++++++++ 
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l------~~v~~~~~Dl~d~~~~~~~~~~~-   87 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV------AGLSVIEGSVTDAGLLERAFDSF-   87 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC------TTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc------CCceEEEeeCCCHHHHHHHHhhc-
Confidence            34477899999999999999999999999999999999654322111111      25788899999999999988765 


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                          ++|+||||||...
T Consensus        88 ----~~D~vih~A~~~~  100 (330)
T 2pzm_A           88 ----KPTHVVHSAAAYK  100 (330)
T ss_dssp             ----CCSEEEECCCCCS
T ss_pred             ----CCCEEEECCccCC
Confidence                7999999999764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.47  E-value=2.3e-13  Score=108.66  Aligned_cols=85  Identities=21%  Similarity=0.296  Sum_probs=70.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHc-CC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKA-GD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~-G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .++++|++|||||+|+||.+++++|++. |+ +|++++|++...+....++.    ..++.++.+|++|.++++++++  
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~--   90 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALE--   90 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTT--
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHh--
Confidence            4578999999999999999999999999 97 99999998876655544432    2368899999999998887763  


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                           ++|+||||||+..
T Consensus        91 -----~~D~Vih~Aa~~~  103 (344)
T 2gn4_A           91 -----GVDICIHAAALKH  103 (344)
T ss_dssp             -----TCSEEEECCCCCC
T ss_pred             -----cCCEEEECCCCCC
Confidence                 6999999999753

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.47  E-value=1.6e-13  Score=108.33  Aligned_cols=87  Identities=14%  Similarity=0.135  Sum_probs=70.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEE-EeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT-KCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .++++++|||||+|+||.++++.|+++|++|++++|+.+..+.....+....+ .++.++ .+|++|.++++++++    
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP-GRFETAVVEDMLKQGAYDEVIK----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST-TTEEEEECSCTTSTTTTTTTTT----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC-CceEEEEecCCcChHHHHHHHc----
Confidence            36789999999999999999999999999999999988766555444433322 257777 799999988776653    


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                         ++|+||||||...
T Consensus        83 ---~~d~vih~A~~~~   95 (342)
T 1y1p_A           83 ---GAAGVAHIASVVS   95 (342)
T ss_dssp             ---TCSEEEECCCCCS
T ss_pred             ---CCCEEEEeCCCCC
Confidence               6999999999764

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.46  E-value=1.5e-13  Score=131.99  Aligned_cols=91  Identities=24%  Similarity=0.279  Sum_probs=74.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhH---HHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERV---DSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      -.+|++|||||++|||++++++|+++|++ |++++|+....   .+..+++... + .++.++.+|++|.++++++++++
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g-~~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ-G-VQVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT-T-CEEEEECCCSSSHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC-C-CEEEEEecCCCCHHHHHHHHHHH
Confidence            36899999999999999999999999996 88889986543   3344444433 3 37889999999999999999998


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                      . .+|+||+||||||+..
T Consensus      1960 ~-~~g~id~lVnnAgv~~ 1976 (2512)
T 2vz8_A         1960 T-QLGPVGGVFNLAMVLR 1976 (2512)
T ss_dssp             H-HHSCEEEEEECCCC--
T ss_pred             H-hcCCCcEEEECCCcCC
Confidence            6 4799999999999864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.46  E-value=4.1e-13  Score=100.39  Aligned_cols=76  Identities=12%  Similarity=0.159  Sum_probs=64.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           81 YNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~-~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      |+++||||+|+||+++++.|+ +.|++|++++|+++ ..++..    .. . .++.++.+|++|.++++++++       
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~-~-~~~~~~~~D~~d~~~~~~~~~-------   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID-H-ERVTVIEGSFQNPGXLEQAVT-------   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT-S-TTEEEEECCTTCHHHHHHHHT-------
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC-C-CceEEEECCCCCHHHHHHHHc-------
Confidence            789999999999999999999 89999999999876 544332    11 2 258899999999999888774       


Q ss_pred             CccEEEEcccC
Q 030706          159 YVDIWVFMSDL  169 (173)
Q Consensus       159 ~id~lVn~AG~  169 (173)
                      ++|+||||||.
T Consensus        73 ~~d~vv~~ag~   83 (221)
T 3r6d_A           73 NAEVVFVGAME   83 (221)
T ss_dssp             TCSEEEESCCC
T ss_pred             CCCEEEEcCCC
Confidence            68999999985

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.44  E-value=5.2e-13  Score=104.26  Aligned_cols=84  Identities=17%  Similarity=0.270  Sum_probs=70.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|+++||||+||||+++++.|++.|++|++++|+.++.++..+++....   .+.++.+|++|.++++++++     
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~---~~~~~~~D~~~~~~~~~~~~-----  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAVK-----  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHTT-----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEecCCCHHHHHHHHH-----
Confidence            3678999999999999999999999999999999999888877777765432   24567899999988776654     


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                        .+|+||||||+.
T Consensus       188 --~~DvlVn~ag~g  199 (287)
T 1lu9_A          188 --GAHFVFTAGAIG  199 (287)
T ss_dssp             --TCSEEEECCCTT
T ss_pred             --hCCEEEECCCcc
Confidence              479999999864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.42  E-value=8.1e-13  Score=104.77  Aligned_cols=86  Identities=19%  Similarity=0.204  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh------HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER------VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~------~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +|++|||||+|+||.+++++|++.|++|++++|+...      ..+..+++....+. ++.++.+|++|.+++++++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR-SVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCC-ceEEEECCCCCHHHHHHHHHhc
Confidence            5789999999999999999999999999999885432      22233334332232 5788899999999988887652


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                           ++|+||||||...
T Consensus        81 -----~~d~vih~A~~~~   93 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKA   93 (348)
T ss_dssp             -----CEEEEEECCSCCC
T ss_pred             -----CCCEEEECCCCcC
Confidence                 7999999999753

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.41  E-value=1e-13  Score=105.24  Aligned_cols=73  Identities=25%  Similarity=0.268  Sum_probs=62.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |++|||||+||||+++++.|+++|++|++++|+.+..+.               .+.+|++|.++++++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHc---CCCc
Confidence            689999999999999999999999999999998654210               1578999999998888754   3789


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+||||||+..
T Consensus        64 d~vi~~Ag~~~   74 (255)
T 2dkn_A           64 DGLVCCAGVGV   74 (255)
T ss_dssp             SEEEECCCCCT
T ss_pred             cEEEECCCCCC
Confidence            99999999865

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.40  E-value=1e-12  Score=99.39  Aligned_cols=78  Identities=17%  Similarity=0.136  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +++|+++||||+|+||++++++|+++  |++|++++|+.+..++.        . .++.++.+|++|.++++++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--------~-~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------G-GEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------T-CCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--------C-CCeeEEEecCCCHHHHHHHHc----
Confidence            34689999999999999999999999  89999999987554321        1 246678999999999888774    


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                         .+|+||||||...
T Consensus        69 ---~~d~vi~~a~~~~   81 (253)
T 1xq6_A           69 ---GIDALVILTSAVP   81 (253)
T ss_dssp             ---TCSEEEECCCCCC
T ss_pred             ---CCCEEEEeccccc
Confidence               5899999999753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.40  E-value=4.5e-13  Score=101.38  Aligned_cols=77  Identities=14%  Similarity=0.076  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..|++|||||+|+||+++++.|+++| ++|++++|+++..++.       .. ..+.++.+|++|+++++++++      
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------~~-~~~~~~~~Dl~d~~~~~~~~~------   87 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------YP-TNSQIIMGDVLNHAALKQAMQ------   87 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------CC-TTEEEEECCTTCHHHHHHHHT------
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------cc-CCcEEEEecCCCHHHHHHHhc------
Confidence            35899999999999999999999999 8999999987654321       11 258889999999999888775      


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       .+|+||||||..
T Consensus        88 -~~D~vv~~a~~~   99 (236)
T 3qvo_A           88 -GQDIVYANLTGE   99 (236)
T ss_dssp             -TCSEEEEECCST
T ss_pred             -CCCEEEEcCCCC
Confidence             589999999853

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.40  E-value=6.9e-14  Score=105.73  Aligned_cols=78  Identities=21%  Similarity=0.198  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.+|+++||||+|+||+++++.|+++|+  +|++++|+++..+...       . .++.++.+|++|.++++++++    
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------~-~~~~~~~~D~~d~~~~~~~~~----   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------Y-KNVNQEVVDFEKLDDYASAFQ----   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------G-GGCEEEECCGGGGGGGGGGGS----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------c-CCceEEecCcCCHHHHHHHhc----
Confidence            5678999999999999999999999999  9999999875432211       0 146788999999988877653    


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                         ++|+||||||..
T Consensus        84 ---~~d~vi~~ag~~   95 (242)
T 2bka_A           84 ---GHDVGFCCLGTT   95 (242)
T ss_dssp             ---SCSEEEECCCCC
T ss_pred             ---CCCEEEECCCcc
Confidence               799999999975

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.39  E-value=1.2e-12  Score=103.92  Aligned_cols=87  Identities=18%  Similarity=0.183  Sum_probs=69.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCC---ceEEEEEeeCCCHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE---QHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ++.++++|||||+|+||.++++.|+++|++|++++|+..........+......   .++.++.+|++|.++++++++  
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence            457899999999999999999999999999999999765544444444332110   258899999999998887764  


Q ss_pred             HHhcCCccEEEEcccCC
Q 030706          154 QKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~  170 (173)
                           ++|+|||+||..
T Consensus       100 -----~~d~Vih~A~~~  111 (351)
T 3ruf_A          100 -----GVDHVLHQAALG  111 (351)
T ss_dssp             -----TCSEEEECCCCC
T ss_pred             -----CCCEEEECCccC
Confidence                 699999999974

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.39  E-value=7.2e-13  Score=105.61  Aligned_cols=85  Identities=20%  Similarity=0.126  Sum_probs=69.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.++++|||||+|+||.+++++|+++|++|++++|+....+.....+.  .. .++.++.+|++|.+++.++++.+    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~-~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VA-DGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--TT-TTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--cC-CceEEEEccccCHHHHHHHHHhc----
Confidence            567899999999999999999999999999999998655433333221  11 25778899999999999988765    


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       ++|+||||||..
T Consensus        80 -~~d~vih~A~~~   91 (357)
T 1rkx_A           80 -QPEIVFHMAAQP   91 (357)
T ss_dssp             -CCSEEEECCSCC
T ss_pred             -CCCEEEECCCCc
Confidence             799999999963

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.39  E-value=5.7e-13  Score=105.50  Aligned_cols=83  Identities=19%  Similarity=0.149  Sum_probs=65.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.++++|||||+|+||.++++.|+++|++|++++|+.....+....    .  .++.++.+|++|.++++++++.     
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~----~--~~~~~~~~Dl~d~~~~~~~~~~-----   87 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD----H--PNLTFVEGSIADHALVNQLIGD-----   87 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC----C--TTEEEEECCTTCHHHHHHHHHH-----
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh----c--CCceEEEEeCCCHHHHHHHHhc-----
Confidence            5678999999999999999999999999999999975432111100    0  2578899999999999888865     


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||...
T Consensus        88 ~~~D~vih~A~~~~  101 (333)
T 2q1w_A           88 LQPDAVVHTAASYK  101 (333)
T ss_dssp             HCCSEEEECCCCCS
T ss_pred             cCCcEEEECceecC
Confidence            27999999999864

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.38  E-value=1.5e-12  Score=103.08  Aligned_cols=81  Identities=16%  Similarity=0.216  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC-------CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAG-------DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      ..++++++|||||+|+||.++++.|+++|       ++|++++|+......       . ...++.++.+|++|.+++++
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~-~~~~~~~~~~Dl~d~~~~~~   81 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------G-FSGAVDARAADLSAPGEAEK   81 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------T-CCSEEEEEECCTTSTTHHHH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------c-cCCceeEEEcCCCCHHHHHH
Confidence            34678899999999999999999999999       899999997643211       1 12368889999999999888


Q ss_pred             HHHHHHHhcCCccEEEEcccCC
Q 030706          149 LVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       149 ~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      +++      +++|+||||||..
T Consensus        82 ~~~------~~~d~vih~A~~~   97 (342)
T 2hrz_A           82 LVE------ARPDVIFHLAAIV   97 (342)
T ss_dssp             HHH------TCCSEEEECCCCC
T ss_pred             HHh------cCCCEEEECCccC
Confidence            775      4799999999975

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.38  E-value=2.3e-12  Score=102.55  Aligned_cols=87  Identities=22%  Similarity=0.170  Sum_probs=66.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC---CceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG---EQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +.++++|||||+|+||.++++.|++.|++|++++|+.....+....+.+...   ..++.++.+|++|.++++++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            5678999999999999999999999999999999975422222222221110   0258889999999998887764   


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                          ++|+|||+||...
T Consensus       102 ----~~d~vih~A~~~~  114 (352)
T 1sb8_A          102 ----GVDYVLHQAALGS  114 (352)
T ss_dssp             ----TCSEEEECCSCCC
T ss_pred             ----CCCEEEECCcccC
Confidence                6999999999753

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.37  E-value=2.5e-12  Score=101.60  Aligned_cols=83  Identities=20%  Similarity=0.282  Sum_probs=63.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      ++|||||+|+||.+++++|+++|++|+++++......+....+....+. ++.++.+|++|++++++++++.     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK-HPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTS-CCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCC-cceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            6899999999999999999999999999986432211222223322222 5778899999999988887652     699


Q ss_pred             EEEEcccCC
Q 030706          162 IWVFMSDLH  170 (173)
Q Consensus       162 ~lVn~AG~~  170 (173)
                      +||||||..
T Consensus        76 ~vih~A~~~   84 (338)
T 1udb_A           76 TVIHFAGLK   84 (338)
T ss_dssp             EEEECCSCC
T ss_pred             EEEECCccC
Confidence            999999975

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.37  E-value=5.5e-12  Score=101.73  Aligned_cols=87  Identities=17%  Similarity=0.206  Sum_probs=66.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HcCCEEEEEecChhh---------HHHHHHHHHHHhC---Cce---EEEEEeeCCCHH
Q 030706           81 YNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSAER---------VDSAVQSLREEFG---EQH---VWGTKCDVSEGN  144 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~-~~G~~V~~~~r~~~~---------~~~~~~~l~~~~~---~~~---~~~~~~Dv~~~~  144 (173)
                      +++|||||+|+||.++++.|+ +.|++|++++|+...         .+.....+....+   ..+   +.++.+|++|.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            489999999999999999999 999999999987543         2333222222211   113   788899999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++++++++    ++++|+||||||...
T Consensus        83 ~~~~~~~~----~~~~d~vih~A~~~~  105 (397)
T 1gy8_A           83 FLNGVFTR----HGPIDAVVHMCAFLA  105 (397)
T ss_dssp             HHHHHHHH----SCCCCEEEECCCCCC
T ss_pred             HHHHHHHh----cCCCCEEEECCCccC
Confidence            98887753    567999999999764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.36  E-value=1.5e-12  Score=95.72  Aligned_cols=77  Identities=21%  Similarity=0.200  Sum_probs=63.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +++++||||+|+||++++++|+++|++|++++|+++..+..       . ..++.++.+|++|.++++++++       .
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~-~~~~~~~~~D~~~~~~~~~~~~-------~   67 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------G-PRPAHVVVGDVLQAADVDKTVA-------G   67 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------S-CCCSEEEESCTTSHHHHHHHHT-------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-------c-CCceEEEEecCCCHHHHHHHHc-------C
Confidence            37899999999999999999999999999999987653211       0 1257888999999998887764       5


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||...
T Consensus        68 ~d~vi~~a~~~~   79 (206)
T 1hdo_A           68 QDAVIVLLGTRN   79 (206)
T ss_dssp             CSEEEECCCCTT
T ss_pred             CCEEEECccCCC
Confidence            899999999754

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.36  E-value=8.4e-12  Score=100.78  Aligned_cols=88  Identities=17%  Similarity=0.108  Sum_probs=66.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH----------------HHHHHHHHHhCCceEEEEEeeCC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD----------------SAVQSLREEFGEQHVWGTKCDVS  141 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~~Dv~  141 (173)
                      ..+..+|||||+|+||.++++.|+++|++|++++|......                +....+..... .++.++.+|++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~v~~~~~Dl~   87 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG-KSIELYVGDIC   87 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC-CCCEEEESCTT
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccC-CceEEEECCCC
Confidence            45778999999999999999999999999999998653321                11222222222 25788899999


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          142 EGNEVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       142 ~~~~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      |.++++++++..     ++|+||||||...
T Consensus        88 d~~~~~~~~~~~-----~~D~Vih~A~~~~  112 (404)
T 1i24_A           88 DFEFLAESFKSF-----EPDSVVHFGEQRS  112 (404)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             CHHHHHHHHhcc-----CCCEEEECCCCCC
Confidence            999999888765     6999999999753

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.36  E-value=3.4e-12  Score=102.04  Aligned_cols=87  Identities=20%  Similarity=0.148  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH-HHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD-SAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +|+++||||+|+||.+++++|+++|++|++++|+..... +....+....  ...++.++.+|++|.++++++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            368999999999999999999999999999999764321 1112221110  0125888899999999999988775   


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                        ++|+||||||...
T Consensus        78 --~~d~vih~A~~~~   90 (372)
T 1db3_A           78 --QPDEVYNLGAMSH   90 (372)
T ss_dssp             --CCSEEEECCCCCT
T ss_pred             --CCCEEEECCcccC
Confidence              7999999999754

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.36  E-value=7.2e-12  Score=99.03  Aligned_cols=83  Identities=19%  Similarity=0.192  Sum_probs=65.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      |++|||||+|+||.++++.|++.|++|++++|.. .........+...   .++.++.+|++|.++++++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL---GNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC---CceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            5799999999999999999999999999999853 2222333334321   24788899999999999888762     7


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||...
T Consensus        74 ~d~vih~A~~~~   85 (347)
T 1orr_A           74 PDSCFHLAGQVA   85 (347)
T ss_dssp             CSEEEECCCCCC
T ss_pred             CCEEEECCcccC
Confidence            999999999753

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.35  E-value=9.2e-13  Score=105.35  Aligned_cols=88  Identities=15%  Similarity=0.107  Sum_probs=65.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHH--cCCEEEEEecChhhHHHH---H---HHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLK--AGDNVIICSRSAERVDSA---V---QSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~---~---~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      .+.++++|||||+|+||.++++.|++  .|++|++++|+.......   .   ...... ...++.++.+|++|.+++++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL-IGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG-TTCCSEEEECCTTCHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc-cccCceEEECCCCCHHHHHH
Confidence            46789999999999999999999999  899999999965411000   0   000111 12256888999999998887


Q ss_pred             HHHHHHHhcCCccEEEEcccCCC
Q 030706          149 LVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       149 ~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      +      ...++|+||||||+..
T Consensus        86 ~------~~~~~D~vih~A~~~~  102 (362)
T 3sxp_A           86 L------EKLHFDYLFHQAAVSD  102 (362)
T ss_dssp             H------TTSCCSEEEECCCCCG
T ss_pred             h------hccCCCEEEECCccCC
Confidence            6      2358999999999753

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.35  E-value=3.9e-12  Score=100.32  Aligned_cols=86  Identities=20%  Similarity=0.028  Sum_probs=66.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH-HHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD-SAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -+++++|||||+|+||.++++.|+++|++|++++|+..... .....+   ....++.++.+|++|.++++++++.+   
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~---   85 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADACSVQRAVIKA---   85 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhc---cccCceEEEECCCCCHHHHHHHHHHc---
Confidence            34678999999999999999999999999999999764321 111111   11235888999999999999988765   


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                        ++|+|||+||...
T Consensus        86 --~~d~Vih~A~~~~   98 (335)
T 1rpn_A           86 --QPQEVYNLAAQSF   98 (335)
T ss_dssp             --CCSEEEECCSCCC
T ss_pred             --CCCEEEECccccc
Confidence              7999999999753

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.35  E-value=1.5e-12  Score=97.37  Aligned_cols=74  Identities=24%  Similarity=0.292  Sum_probs=63.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      ++++||||+|+||+++++.|+++|++|++++|+.+..+..        . .++.++.+|++|.++++++++       ++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~-~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--------N-EHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--------C-TTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--------c-CceEEEEecCCCHHHHHHHhc-------CC
Confidence            6899999999999999999999999999999987653221        1 258899999999999888775       58


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+||||||..
T Consensus        69 d~vi~~a~~~   78 (227)
T 3dhn_A           69 DAVISAFNPG   78 (227)
T ss_dssp             SEEEECCCC-
T ss_pred             CEEEEeCcCC
Confidence            9999999875

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.34  E-value=1e-12  Score=98.07  Aligned_cols=73  Identities=23%  Similarity=0.265  Sum_probs=62.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHHhcCCc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i  160 (173)
                      +++||||+|+||+++++.|+++|++|++++|+.+..+..          .++.++.+|++| .++++++++       ++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~-------~~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLH-------GM   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTTT-------TC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHHc-------CC
Confidence            699999999999999999999999999999987654321          258899999999 888777653       69


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+||||||...
T Consensus        65 d~vi~~ag~~~   75 (219)
T 3dqp_A           65 DAIINVSGSGG   75 (219)
T ss_dssp             SEEEECCCCTT
T ss_pred             CEEEECCcCCC
Confidence            99999999864

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.33  E-value=2.2e-12  Score=102.33  Aligned_cols=76  Identities=16%  Similarity=0.128  Sum_probs=61.1

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .....+|++|||||+|+||.++++.|+++|++|++++|+...              .++.++.+|++|.+++.++++   
T Consensus        14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~---   76 (347)
T 4id9_A           14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIM---   76 (347)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHT---
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHh---
Confidence            344678899999999999999999999999999999998654              146788999999999887764   


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                          ++|+|||+||...
T Consensus        77 ----~~d~vih~A~~~~   89 (347)
T 4id9_A           77 ----GVSAVLHLGAFMS   89 (347)
T ss_dssp             ----TCSEEEECCCCCC
T ss_pred             ----CCCEEEECCcccC
Confidence                7999999999764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.33  E-value=3.3e-12  Score=100.20  Aligned_cols=77  Identities=21%  Similarity=0.161  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ...+++|||||+|+||.++++.|+++|++|++++|+... +.    +       ++.++.+|++|.++++++++.     
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHH-----
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHh-----
Confidence            456899999999999999999999999999999998654 11    1       377889999999999988875     


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +++|+||||||...
T Consensus        73 ~~~d~vih~A~~~~   86 (321)
T 2pk3_A           73 IKPDYIFHLAAKSS   86 (321)
T ss_dssp             HCCSEEEECCSCCC
T ss_pred             cCCCEEEEcCcccc
Confidence            37999999999754

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.33  E-value=4.6e-12  Score=101.85  Aligned_cols=85  Identities=15%  Similarity=0.051  Sum_probs=64.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-----HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      |++|||||+|+||.++++.|++.|++|++++|+...     ++.....+..... .++.++.+|++|.+++.++++.+  
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~--  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNK-ALMKLHYADLTDASSLRRWIDVI--  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccc-cceEEEECCCCCHHHHHHHHHhc--
Confidence            789999999999999999999999999999997643     2221111111111 04788899999999999988775  


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                         ++|+||||||...
T Consensus       106 ---~~d~Vih~A~~~~  118 (381)
T 1n7h_A          106 ---KPDEVYNLAAQSH  118 (381)
T ss_dssp             ---CCSEEEECCSCCC
T ss_pred             ---CCCEEEECCcccC
Confidence               7999999999754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.33  E-value=5.2e-12  Score=109.32  Aligned_cols=89  Identities=16%  Similarity=0.193  Sum_probs=67.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.....+....+..... .++.++.+|++|.+++++++++.   
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~v~~v~~Dl~d~~~l~~~~~~~---   83 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-HHIPFYEVDLCDRKGLEKVFKEY---   83 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT-SCCCEEECCTTCHHHHHHHHHHS---
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccC-CceEEEEcCCCCHHHHHHHHHhC---
Confidence            36689999999999999999999999999999999875433233333332222 25778899999999998887653   


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                        ++|+||||||...
T Consensus        84 --~~D~Vih~A~~~~   96 (699)
T 1z45_A           84 --KIDSVIHFAGLKA   96 (699)
T ss_dssp             --CCCEEEECCSCCC
T ss_pred             --CCCEEEECCcccC
Confidence              7999999999754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.31  E-value=6.3e-12  Score=100.82  Aligned_cols=85  Identities=16%  Similarity=0.086  Sum_probs=64.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-----HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      |++|||||+|+||.++++.|+++|++|++++|+...     .+.....+... ...++.++.+|++|.+++.++++.+  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            789999999999999999999999999999997542     11111111000 1125888899999999999988775  


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                         ++|+||||||...
T Consensus       102 ---~~d~vih~A~~~~  114 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSH  114 (375)
T ss_dssp             ---CCSEEEECCSCCC
T ss_pred             ---CCCEEEECCCccc
Confidence               6999999999753

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.31  E-value=1.5e-12  Score=98.29  Aligned_cols=77  Identities=21%  Similarity=0.327  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC
Q 030706           78 LPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS  141 (173)
Q Consensus        78 ~~~k~~lItGa----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (173)
                      +.||++|||||                +||||+++|+.|+++|++|++++++.. ++         .+. .+.  .+|++
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~~-g~~--~~dv~   72 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TPP-FVK--RVDVM   72 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CCT-TEE--EEECC
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cCC-CCe--EEccC
Confidence            78999999999                699999999999999999999987642 11         011 122  46777


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          142 EGNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       142 ~~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      +.   +++++.+.+.+|++|+||||||+.
T Consensus        73 ~~---~~~~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           73 TA---LEMEAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             SH---HHHHHHHHHHGGGCSEEEECCBCC
T ss_pred             cH---HHHHHHHHHhcCCCCEEEECCccc
Confidence            74   456677778889999999999986

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.31  E-value=2.3e-12  Score=96.13  Aligned_cols=72  Identities=21%  Similarity=0.226  Sum_probs=59.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+|+||+++++.|+++|++|++++|+.+..++.       .. ..+.++.+|++|.++         +.++++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~-~~~~~~~~D~~d~~~---------~~~~~~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-------LG-ATVATLVKEPLVLTE---------ADLDSVD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-------TC-TTSEEEECCGGGCCH---------HHHTTCS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-------cC-CCceEEecccccccH---------hhcccCC
Confidence            599999999999999999999999999999987654432       11 257888999999887         2235799


Q ss_pred             EEEEcccCC
Q 030706          162 IWVFMSDLH  170 (173)
Q Consensus       162 ~lVn~AG~~  170 (173)
                      +||||||..
T Consensus        65 ~vi~~ag~~   73 (224)
T 3h2s_A           65 AVVDALSVP   73 (224)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCccC
Confidence            999999985

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.31  E-value=1.5e-12  Score=103.30  Aligned_cols=88  Identities=14%  Similarity=0.160  Sum_probs=65.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ++.++++|||||+|+||.++++.|+++|  ++|++.+|......  ...+.......++.++.+|++|.++++++++.. 
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   97 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-   97 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-
Confidence            3567899999999999999999999999  78888887542110  111111122236889999999999999998764 


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                          ++|+|||+||...
T Consensus        98 ----~~d~Vih~A~~~~  110 (346)
T 4egb_A           98 ----DVQVIVNFAAESH  110 (346)
T ss_dssp             ----TCCEEEECCCCC-
T ss_pred             ----CCCEEEECCcccc
Confidence                6999999999764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.30  E-value=4.6e-12  Score=94.10  Aligned_cols=72  Identities=17%  Similarity=0.167  Sum_probs=59.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+|+||+++++.|+++|++|++++|+.+..+...         ..+.++.+|++|.++         +.++++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~---------~~~~~~d   63 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL---------SDLSDQN   63 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH---------HHHTTCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh---------hhhcCCC
Confidence            5899999999999999999999999999999876543321         247888999999887         2235799


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +||||||...
T Consensus        64 ~vi~~ag~~~   73 (221)
T 3ew7_A           64 VVVDAYGISP   73 (221)
T ss_dssp             EEEECCCSST
T ss_pred             EEEECCcCCc
Confidence            9999999853

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.30  E-value=3.2e-12  Score=101.11  Aligned_cols=85  Identities=19%  Similarity=0.138  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++|++|||||+|+||.+++++|+++|++|+++.|+.+..++.. .+..... ..++.++.+|++|.++++++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            35789999999999999999999999999999999875433221 1111100 1247888999999998887764     


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                        .+|+|||+||..
T Consensus        77 --~~d~Vih~A~~~   88 (337)
T 2c29_D           77 --GCTGVFHVATPM   88 (337)
T ss_dssp             --TCSEEEECCCCC
T ss_pred             --CCCEEEEecccc
Confidence              589999999864

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.30  E-value=8.3e-12  Score=99.26  Aligned_cols=86  Identities=22%  Similarity=0.143  Sum_probs=64.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +..++++||||+|+||.++++.|++.|++|++++|+.....+....+..... ..+.++.+|++|.+++.+++++.    
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~----   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED-KGAIIVYGLINEQEAMEKILKEH----   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHH-TTCEEEECCTTCHHHHHHHHHHT----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHh-CCcEEEEeecCCHHHHHHHHhhC----
Confidence            3356899999999999999999999999999999976221111222221111 24788899999999999888653    


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                       ++|+|||+||.
T Consensus        83 -~~d~Vi~~a~~   93 (346)
T 3i6i_A           83 -EIDIVVSTVGG   93 (346)
T ss_dssp             -TCCEEEECCCG
T ss_pred             -CCCEEEECCch
Confidence             79999999986

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.28  E-value=4.8e-12  Score=103.47  Aligned_cols=86  Identities=16%  Similarity=0.124  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh---hHHHHHHHHHHHhC-------CceEEEEEeeCCCHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE---RVDSAVQSLREEFG-------EQHVWGTKCDVSEGNEVA  147 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~-------~~~~~~~~~Dv~~~~~v~  147 (173)
                      ..++++|||||+|+||.+++++|++.|++|++++|+..   ..+...+.+...+.       ..++.++.+|++|.+++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            45689999999999999999999999999999999876   33333333322210       126899999999988777


Q ss_pred             HHHHHHHHhcCCccEEEEcccCCC
Q 030706          148 DLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       148 ~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                              .++++|+||||||...
T Consensus       147 --------~~~~~d~Vih~A~~~~  162 (427)
T 4f6c_A          147 --------LPENMDTIIHAGARTD  162 (427)
T ss_dssp             --------CSSCCSEEEECCCCC-
T ss_pred             --------CcCCCCEEEECCcccC
Confidence                    4579999999999753

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.26  E-value=5.6e-11  Score=98.78  Aligned_cols=87  Identities=24%  Similarity=0.226  Sum_probs=65.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEecChhhHHHHHHHHHHHhC--------------CceEEEEEee
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKA---GDNVIICSRSAERVDSAVQSLREEFG--------------EQHVWGTKCD  139 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~~D  139 (173)
                      ...+|++|||||+|+||.+++++|++.   |++|++++|+..... ....+.+...              ..++.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            366899999999999999999999999   899999999865432 2222222111              1369999999


Q ss_pred             CC------CHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          140 VS------EGNEVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       140 v~------~~~~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      ++      |.+.++++++       ++|+||||||...
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~  179 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVN  179 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCS
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccC
Confidence            98      5556666554       5899999999753

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.26  E-value=1.1e-11  Score=97.86  Aligned_cols=81  Identities=16%  Similarity=0.131  Sum_probs=63.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH--HHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA--VQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +|++|||||+|+||.++++.|+++|++|+++.|+.+..+..  ...+. . . .++.++.+|++|.++++++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~-~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E-L-GDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G-G-SCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C-C-CcEEEEecCCCChHHHHHHHc------
Confidence            68899999999999999999999999999988876532211  11221 1 1 257888999999988877764      


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       ++|+|||+||..
T Consensus        80 -~~D~Vih~A~~~   91 (338)
T 2rh8_A           80 -GCDFVFHVATPV   91 (338)
T ss_dssp             -TCSEEEEESSCC
T ss_pred             -CCCEEEEeCCcc
Confidence             589999999864

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.25  E-value=2.5e-11  Score=94.52  Aligned_cols=79  Identities=19%  Similarity=0.248  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-------hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-------ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      +++++||||+|+||.++++.|++.|++|++++|+.       +..+. ...+..  .  .+.++.+|++|.+++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~--~--~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQS--L--GVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHH--T--TCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHh--C--CCEEEEeCCCCHHHHHHHHh-
Confidence            46799999999999999999999999999999986       33322 222322  2  37788999999998887764 


Q ss_pred             HHHhcCCccEEEEcccCC
Q 030706          153 AQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~  170 (173)
                            ++|+|||+||..
T Consensus        76 ------~~d~vi~~a~~~   87 (307)
T 2gas_A           76 ------QVDIVICAAGRL   87 (307)
T ss_dssp             ------TCSEEEECSSSS
T ss_pred             ------CCCEEEECCccc
Confidence                  599999999864

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.25  E-value=1e-11  Score=99.37  Aligned_cols=80  Identities=20%  Similarity=0.207  Sum_probs=65.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC-CHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS-EGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~  155 (173)
                      +.++++|||||+|+||.++++.|+++ |++|++++|+.+......       ...++.++.+|++ |.+.++++++    
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~~d~~~~~~~~~----   90 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-------KHERMHFFEGDITINKEWVEYHVK----   90 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG-------GSTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc-------cCCCeEEEeCccCCCHHHHHHHhc----
Confidence            55789999999999999999999998 899999999875543221       1125889999999 9998888775    


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                         ++|+|||+||...
T Consensus        91 ---~~d~Vih~A~~~~  103 (372)
T 3slg_A           91 ---KCDVILPLVAIAT  103 (372)
T ss_dssp             ---HCSEEEECBCCCC
T ss_pred             ---cCCEEEEcCcccc
Confidence               4899999999764

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.25  E-value=3.4e-12  Score=100.07  Aligned_cols=80  Identities=21%  Similarity=0.166  Sum_probs=59.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-Chhh---HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAER---VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~---~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ||++|||||+|+||.++++.|+++|++|+++.| +.+.   .... ..+...  ..++.++.+|++|.++++++++    
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGA--SEKLHFFNADLSNPDSFAAAIE----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTH--HHHEEECCCCTTCGGGGHHHHT----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-Hhhhcc--CCceEEEecCCCCHHHHHHHHc----
Confidence            578999999999999999999999999999888 5432   1111 111100  1247788999999999888764    


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                         .+|+|||+|+.
T Consensus        74 ---~~d~vih~A~~   84 (322)
T 2p4h_X           74 ---GCVGIFHTASP   84 (322)
T ss_dssp             ---TCSEEEECCCC
T ss_pred             ---CCCEEEEcCCc
Confidence               57999999974

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.24  E-value=9.6e-12  Score=98.10  Aligned_cols=81  Identities=22%  Similarity=0.199  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChh--hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE--RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ++++|||||+|+||.++++.|+++|  ++|++++|...  ..+.. .++.   ...++.++.+|++|.+++++++     
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~-----   73 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE---DDPRYTFVKGDVADYELVKELV-----   73 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHH-----
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc---cCCceEEEEcCCCCHHHHHHHh-----
Confidence            4579999999999999999999997  89999998642  11111 1111   1235888999999999988877     


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                        +++|+||||||...
T Consensus        74 --~~~d~vih~A~~~~   87 (336)
T 2hun_A           74 --RKVDGVVHLAAESH   87 (336)
T ss_dssp             --HTCSEEEECCCCCC
T ss_pred             --hCCCEEEECCCCcC
Confidence              37999999999753

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.24  E-value=6e-12  Score=101.25  Aligned_cols=81  Identities=19%  Similarity=0.262  Sum_probs=64.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.+++++||||+|+||.++++.|+++| ++|++++|+.....+.   +.   ...++.++.+|++|.++++++++     
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~---~~~~v~~~~~Dl~d~~~l~~~~~-----   98 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP---DHPAVRFSETSITDDALLASLQD-----   98 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC---CCTTEEEECSCTTCHHHHHHCCS-----
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc---CCCceEEEECCCCCHHHHHHHhh-----
Confidence            567899999999999999999999999 9999999976432111   10   12358889999999988776653     


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                        ++|+|||+||...
T Consensus        99 --~~d~Vih~A~~~~  111 (377)
T 2q1s_A           99 --EYDYVFHLATYHG  111 (377)
T ss_dssp             --CCSEEEECCCCSC
T ss_pred             --CCCEEEECCCccC
Confidence              7999999999753

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.24  E-value=1.3e-11  Score=96.70  Aligned_cols=71  Identities=21%  Similarity=0.244  Sum_probs=45.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|++|||||+|+||.++++.|+++|++|++++|+...            +  +  ++.+|++|.++++++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~--~--~~~~Dl~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P--K--FEQVNLLDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C--C--eEEecCCCHHHHHHHHHhh-----C
Confidence            5789999999999999999999999999999986532            1  2  5678999999998888765     7


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+||||||...
T Consensus        61 ~d~vih~A~~~~   72 (315)
T 2ydy_A           61 PHVIVHCAAERR   72 (315)
T ss_dssp             CSEEEECC----
T ss_pred             CCEEEECCcccC
Confidence            999999999753

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.24  E-value=3.7e-11  Score=93.62  Aligned_cols=83  Identities=18%  Similarity=0.169  Sum_probs=62.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH--HHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV--DSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .++++||||+|+||.++++.|++.|++|++++|+....  .+..+.+..... ..+.++.+|++|.+++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~-~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA-SGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT-TTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh-CCCEEEEeccCCHHHHHHHHc------
Confidence            46799999999999999999999999999999975321  111122221112 247788999999998887775      


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       ++|+|||+||..
T Consensus        77 -~~d~vi~~a~~~   88 (308)
T 1qyc_A           77 -NVDVVISTVGSL   88 (308)
T ss_dssp             -TCSEEEECCCGG
T ss_pred             -CCCEEEECCcch
Confidence             589999999863

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.22  E-value=6e-11  Score=92.30  Aligned_cols=77  Identities=16%  Similarity=0.142  Sum_probs=62.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .|+++||||+|+||.++++.|+++| ++|++++|+++....  ..+..  .  .+.++.+|++|.++++++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~--~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--Q--GAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--T--TCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--C--CCEEEEecCCCHHHHHHHHh-------
Confidence            5789999999999999999999999 999999998765321  22222  1  36788999999998887764       


Q ss_pred             CccEEEEcccC
Q 030706          159 YVDIWVFMSDL  169 (173)
Q Consensus       159 ~id~lVn~AG~  169 (173)
                      ++|+||||+|.
T Consensus        72 ~~d~vi~~a~~   82 (299)
T 2wm3_A           72 GAYATFIVTNY   82 (299)
T ss_dssp             TCSEEEECCCH
T ss_pred             cCCEEEEeCCC
Confidence            58999999985

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.22  E-value=2.2e-11  Score=98.05  Aligned_cols=78  Identities=14%  Similarity=0.049  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+++++||||+|+||.++++.|+++|++|++++|+.......      ..  .++.++.+|++|.++++++++       
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~--~~v~~~~~Dl~d~~~~~~~~~-------   92 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DM--FCDEFHLVDLRVMENCLKVTE-------   92 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GG--TCSEEEECCTTSHHHHHHHHT-------
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------cc--CCceEEECCCCCHHHHHHHhC-------
Confidence            457999999999999999999999999999999976442110      01  146788999999998887763       


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+|||+||...
T Consensus        93 ~~d~Vih~A~~~~  105 (379)
T 2c5a_A           93 GVDHVFNLAADMG  105 (379)
T ss_dssp             TCSEEEECCCCCC
T ss_pred             CCCEEEECceecC
Confidence            6999999999753

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.22  E-value=4e-11  Score=94.11  Aligned_cols=79  Identities=20%  Similarity=0.260  Sum_probs=62.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      ++++||||+|+||.++++.|++.|++|++++|+.....+...++..  .  .+.++.+|++|.+++.++++       ++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~--~v~~v~~Dl~d~~~l~~a~~-------~~   80 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--L--GAIIVKGELDEHEKLVELMK-------KV   80 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--T--TCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--C--CCEEEEecCCCHHHHHHHHc-------CC
Confidence            5799999999999999999999999999999987422222223322  2  36788999999998887764       58


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+|||+||..
T Consensus        81 d~vi~~a~~~   90 (318)
T 2r6j_A           81 DVVISALAFP   90 (318)
T ss_dssp             SEEEECCCGG
T ss_pred             CEEEECCchh
Confidence            9999999853

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.22  E-value=4.3e-11  Score=93.43  Aligned_cols=84  Identities=18%  Similarity=0.082  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV-DSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .++++||||+|+||.++++.|++.|++|++++|+.... .+..+.+..... ..+.++.+|++|.+++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~l~~~~~-------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ-LGAKLIEASLDDHQRLVDALK-------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT-TTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHh-CCeEEEeCCCCCHHHHHHHHh-------
Confidence            46799999999999999999999999999999984321 111111211111 247788999999998887764       


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+|||++|...
T Consensus        76 ~~d~vi~~a~~~~   88 (313)
T 1qyd_A           76 QVDVVISALAGGV   88 (313)
T ss_dssp             TCSEEEECCCCSS
T ss_pred             CCCEEEECCcccc
Confidence            5999999999753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.22  E-value=4.4e-11  Score=94.05  Aligned_cols=78  Identities=14%  Similarity=0.176  Sum_probs=63.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      ++++||||+|+||.++++.|+++|++|++++|+.....+   .    ... ++.++.+|++|.+++++++++     +++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~----~~~-~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED---A----ITE-GAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---G----SCT-TSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh---h----cCC-CcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            579999999999999999999999999999986543211   1    111 467889999999998888765     379


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+|||+||...
T Consensus        69 d~vih~a~~~~   79 (330)
T 2c20_A           69 EAVMHFAADSL   79 (330)
T ss_dssp             EEEEECCCCCC
T ss_pred             CEEEECCcccC
Confidence            99999999753

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.20  E-value=6.4e-11  Score=92.95  Aligned_cols=79  Identities=18%  Similarity=0.174  Sum_probs=61.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-h----hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-E----RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~----~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ++++||||+|+||.++++.|++.|++|++++|+. .    ...+....+..  .  .+.++.+|++|.+++.++++    
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~--~v~~v~~D~~d~~~l~~a~~----   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--M--GVTIIEGEMEEHEKMVSVLK----   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--T--TCEEEECCTTCHHHHHHHHT----
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--C--CcEEEEecCCCHHHHHHHHc----
Confidence            5799999999999999999999999999999986 2    11112222221  2  47788999999998887764    


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                         ++|+|||+||..
T Consensus        77 ---~~d~vi~~a~~~   88 (321)
T 3c1o_A           77 ---QVDIVISALPFP   88 (321)
T ss_dssp             ---TCSEEEECCCGG
T ss_pred             ---CCCEEEECCCcc
Confidence               589999999863

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.20  E-value=2.6e-11  Score=95.72  Aligned_cols=75  Identities=13%  Similarity=0.183  Sum_probs=58.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+|+||.++++.|+++|++|++++|+....+.    +..    .++.++.+|++|.++++++++       ++|
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~----~~~~~~~~Dl~d~~~~~~~~~-------~~d   79 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY----LEPECRVAEMLDHAGLERALR-------GLD   79 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG----GCCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc----CCeEEEEecCCCHHHHHHHHc-------CCC
Confidence            79999999999999999999999999999998765322    111    147788999999998877764       599


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +|||+||...
T Consensus        80 ~vih~a~~~~   89 (342)
T 2x4g_A           80 GVIFSAGYYP   89 (342)
T ss_dssp             EEEEC-----
T ss_pred             EEEECCccCc
Confidence            9999999753

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.19  E-value=7.2e-11  Score=93.91  Aligned_cols=81  Identities=17%  Similarity=0.252  Sum_probs=63.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChh--hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           82 NVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAE--RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++|||||+|+||.++++.|++. |++|++++|+..  ..+.. .++.   ...++.++.+|++|.+++++++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS---ESNRYNFEHADICDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh---cCCCeEEEECCCCCHHHHHHHHhhc-----
Confidence            5999999999999999999998 799999998641  11111 1111   1225888999999999999988763     


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+||||||...
T Consensus        73 ~~d~vih~A~~~~   85 (361)
T 1kew_A           73 QPDAVMHLAAESH   85 (361)
T ss_dssp             CCSEEEECCSCCC
T ss_pred             CCCEEEECCCCcC
Confidence            7999999999753

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.18  E-value=3.5e-11  Score=93.82  Aligned_cols=76  Identities=21%  Similarity=0.195  Sum_probs=62.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++++||||+|+||.+++++|+++  |++|++++|+....+     +..     ++.++.+|++|.+++++++++.    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~-----~~~~~~~D~~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN-----SGPFEVVNALDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH-----SSCEEECCTTCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC-----CCceEEecCCCHHHHHHHHhhc----
Confidence            467999999999999999999998  899999999765421     111     2557789999999998887653    


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       ++|+|||+||..
T Consensus        68 -~~d~vih~a~~~   79 (312)
T 2yy7_A           68 -KITDIYLMAALL   79 (312)
T ss_dssp             -TCCEEEECCCCC
T ss_pred             -CCCEEEECCccC
Confidence             699999999974

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.17  E-value=1.9e-11  Score=92.51  Aligned_cols=78  Identities=15%  Similarity=0.216  Sum_probs=58.9

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           79 PPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        79 ~~k~~lItGa----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      .||++|||||                +|++|+++|+.++++|++|+++++......        ..+. .+..  .|+. 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~~~-~~~~--~~v~-   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EPHP-NLSI--REIT-   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CCCT-TEEE--EECC-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cCCC-CeEE--EEHh-
Confidence            4899999999                788999999999999999999998653210        0011 2322  3443 


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          143 GNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       143 ~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                        +++++++.+.+.++++|++|+|||+.
T Consensus        70 --s~~em~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           70 --NTKDLLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             --SHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred             --HHHHHHHHHHHhcCCCCEEEEcCccc
Confidence              56777777888889999999999985

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.16  E-value=1.3e-10  Score=90.96  Aligned_cols=73  Identities=18%  Similarity=0.218  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +++++||||+|+||.++++.|+++|++|++++|+....+     +.      ++.++.+|++ .+++.++++       +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~------~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN------DYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC------ceEEEEcccc-HHHHHHhhc-------C
Confidence            378999999999999999999999999999999843321     11      4778899999 888777664       7


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+|||+||...
T Consensus        63 ~d~Vih~a~~~~   74 (311)
T 3m2p_A           63 VDAVVHLAATRG   74 (311)
T ss_dssp             CSEEEECCCCCC
T ss_pred             CCEEEEccccCC
Confidence            999999999864

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.15  E-value=4.2e-11  Score=93.62  Aligned_cols=77  Identities=18%  Similarity=0.125  Sum_probs=60.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      ++|||||+|+||.++++.|+++|++|++++|......+   .+    . .++.++.+|++|.+++++++++.     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~----~-~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV----P-KGVPFFRVDLRDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS----C-TTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc----c-cCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            68999999999999999999999999999985322110   01    1 13667889999999998888652     799


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +|||+||...
T Consensus        69 ~vi~~a~~~~   78 (311)
T 2p5y_A           69 HVSHQAAQAS   78 (311)
T ss_dssp             EEEECCSCCC
T ss_pred             EEEECccccC
Confidence            9999999753

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.15  E-value=7.3e-12  Score=92.71  Aligned_cols=71  Identities=23%  Similarity=0.139  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++++||||+|+||.+++++|+++|+  +|++++|++..          . . .++.++.+|++|.+++++++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~-~-~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E-H-PRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C-C-TTEECCBSCHHHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c-C-CCceEEeccccCHHHHHHhh------
Confidence            467999999999999999999999998  99999998754          0 1 25778889998887766543      


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                         +|+||||||..
T Consensus        66 ---~d~vi~~a~~~   76 (215)
T 2a35_A           66 ---IDTAFCCLGTT   76 (215)
T ss_dssp             ---CSEEEECCCCC
T ss_pred             ---hcEEEECeeec
Confidence               89999999975

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.14  E-value=4.5e-11  Score=92.25  Aligned_cols=74  Identities=20%  Similarity=0.310  Sum_probs=61.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      |+++||||+|+||.++++.|+++  |++|++++|+.+..+...    .  .  ++.++.+|++|.++++++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~--~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--Q--GVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--T--TCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--c--CCeEEEeccCCHHHHHHHHh-------
Confidence            46899999999999999999998  999999999876544321    1  1  36788999999988877664       


Q ss_pred             CccEEEEcccC
Q 030706          159 YVDIWVFMSDL  169 (173)
Q Consensus       159 ~id~lVn~AG~  169 (173)
                      ++|+|||+||.
T Consensus        66 ~~d~vi~~a~~   76 (287)
T 2jl1_A           66 GVSKLLFISGP   76 (287)
T ss_dssp             TCSEEEECCCC
T ss_pred             cCCEEEEcCCC
Confidence            58999999986

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.14  E-value=2.5e-11  Score=93.13  Aligned_cols=72  Identities=21%  Similarity=0.307  Sum_probs=60.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |+++||||+|+||.++++.|++.|++|++++|+.....          . .++.++.+|++|.++++++++       ++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~-~~~~~~~~Dl~d~~~~~~~~~-------~~   64 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------E-AHEEIVACDLADAQAVHDLVK-------DC   64 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------C-TTEEECCCCTTCHHHHHHHHT-------TC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------C-CCccEEEccCCCHHHHHHHHc-------CC
Confidence            68999999999999999999999999999999764310          1 146788999999998887764       58


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+||||||..
T Consensus        65 d~vi~~a~~~   74 (267)
T 3ay3_A           65 DGIIHLGGVS   74 (267)
T ss_dssp             SEEEECCSCC
T ss_pred             CEEEECCcCC
Confidence            9999999975

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.14  E-value=6.1e-11  Score=93.92  Aligned_cols=80  Identities=16%  Similarity=0.167  Sum_probs=61.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~--G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|||||+|+||.++++.|+++  |++|++++|+... ..+....+    ...++.++.+|++|.++++++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI----LGDRVELVVGDIADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG----CSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh----ccCCeEEEECCCCCHHHHHHHhh------
Confidence            68999999999999999999999  8999999986421 11111111    11368889999999998887764      


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                       .+|+||||||...
T Consensus        75 -~~d~vih~A~~~~   87 (348)
T 1oc2_A           75 -KADAIVHYAAESH   87 (348)
T ss_dssp             -TCSEEEECCSCCC
T ss_pred             -cCCEEEECCcccC
Confidence             4699999999753

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.14  E-value=9e-11  Score=90.84  Aligned_cols=66  Identities=15%  Similarity=0.167  Sum_probs=57.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -..+++|||||+|+||.++++.|+++|++|++++|+                       .+|++|.+++++++++.    
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~----   62 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK----   62 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH----
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc----
Confidence            345789999999999999999999999999999985                       26999999999888765    


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                       ++|+||||||...
T Consensus        63 -~~d~vih~A~~~~   75 (292)
T 1vl0_A           63 -KPNVVINCAAHTA   75 (292)
T ss_dssp             -CCSEEEECCCCCC
T ss_pred             -CCCEEEECCccCC
Confidence             7999999999753

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.14  E-value=4.4e-11  Score=92.58  Aligned_cols=75  Identities=20%  Similarity=0.300  Sum_probs=62.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           82 NVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      +++||||+|+||.++++.|.+. |++|++++|+.+.....       .. ..+.++.+|++|+++++++++       ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------~~-~~v~~~~~D~~d~~~l~~~~~-------~~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------WR-GKVSVRQLDYFNQESMVEAFK-------GM   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------GB-TTBEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------hh-CCCEEEEcCCCCHHHHHHHHh-------CC
Confidence            5899999999999999999998 89999999987654321       11 257888999999998887764       68


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+|||+||...
T Consensus        67 d~vi~~a~~~~   77 (289)
T 3e48_A           67 DTVVFIPSIIH   77 (289)
T ss_dssp             SEEEECCCCCC
T ss_pred             CEEEEeCCCCc
Confidence            99999999754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.12  E-value=1.5e-10  Score=91.37  Aligned_cols=80  Identities=18%  Similarity=0.233  Sum_probs=60.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc---C---CEEEEEecChhhH-HHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKA---G---DNVIICSRSAERV-DSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~---G---~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ++|||||+|+||.+++++|+++   |   ++|++++|..... .+....+   ....++.++.+|++|.+++++++    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV---DADPRLRFVHGDIRDAGLLAREL----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG---TTCTTEEEEECCTTCHHHHHHHT----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhc---ccCCCeEEEEcCCCCHHHHHHHh----
Confidence            6999999999999999999997   8   8999999864210 0111111   11125888999999998887766    


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                         +++|+|||+||...
T Consensus        75 ---~~~d~Vih~A~~~~   88 (337)
T 1r6d_A           75 ---RGVDAIVHFAAESH   88 (337)
T ss_dssp             ---TTCCEEEECCSCCC
T ss_pred             ---cCCCEEEECCCccC
Confidence               47999999999753

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.12  E-value=2.5e-10  Score=90.11  Aligned_cols=77  Identities=18%  Similarity=0.180  Sum_probs=60.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHHhcC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQKNLK  158 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g  158 (173)
                      ++++||||+|+||.+++++|+++ |++|++++|+....+...       ...++.++.+|++|. +.++++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhcc-------
Confidence            46999999999999999999998 899999999876543211       112588899999984 55666654       


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+|||+||...
T Consensus        67 ~~d~vih~A~~~~   79 (345)
T 2bll_A           67 KCDVVLPLVAIAT   79 (345)
T ss_dssp             HCSEEEECBCCCC
T ss_pred             CCCEEEEcccccC
Confidence            4799999999754

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.11  E-value=5.7e-11  Score=94.52  Aligned_cols=79  Identities=20%  Similarity=0.167  Sum_probs=63.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-----CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAG-----DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G-----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +++++||||+|+||.+++++|+++|     ++|++++|+.....     +    ...++.++.+|++|.++++++++.  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~----~~~~~~~~~~Dl~d~~~~~~~~~~--   69 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H----EDNPINYVQCDISDPDDSQAKLSP--   69 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C----CSSCCEEEECCTTSHHHHHHHHTT--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c----ccCceEEEEeecCCHHHHHHHHhc--
Confidence            4689999999999999999999999     99999999765422     0    112578889999999988777643  


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                        .+.+|+|||+||...
T Consensus        70 --~~~~d~vih~a~~~~   84 (364)
T 2v6g_A           70 --LTDVTHVFYVTWANR   84 (364)
T ss_dssp             --CTTCCEEEECCCCCC
T ss_pred             --CCCCCEEEECCCCCc
Confidence              234999999999753

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.10  E-value=2.8e-10  Score=87.05  Aligned_cols=68  Identities=21%  Similarity=0.265  Sum_probs=58.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+|+||.++++.|+ +|++|++++|+....            . .   +.+|++|.++++++++.+     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~------------~-~---~~~Dl~~~~~~~~~~~~~-----~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ------------G-G---YKLDLTDFPRLEDFIIKK-----RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT------------T-C---EECCTTSHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC------------C-C---ceeccCCHHHHHHHHHhc-----CCC
Confidence            58999999999999999999 489999999986420            1 2   689999999999988765     799


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +||||||...
T Consensus        60 ~vi~~a~~~~   69 (273)
T 2ggs_A           60 VIINAAAMTD   69 (273)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECCcccC
Confidence            9999999754

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.09  E-value=1.2e-10  Score=89.79  Aligned_cols=74  Identities=14%  Similarity=0.254  Sum_probs=58.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           82 NVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +++||||+|+||.++++.|+++  |++|++++|+.+..+...    .  .  .+.++.+|++|.++++++++       +
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~--~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--Q--GITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--T--TCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--C--CCeEEEcCCCCHHHHHHHHh-------C
Confidence            3799999999999999999998  999999999876544321    1  1  36788999999988877653       5


Q ss_pred             ccEEEEcccCC
Q 030706          160 VDIWVFMSDLH  170 (173)
Q Consensus       160 id~lVn~AG~~  170 (173)
                      +|+|||+||..
T Consensus        66 ~d~vi~~a~~~   76 (286)
T 2zcu_A           66 VEKLLLISSSE   76 (286)
T ss_dssp             CSEEEECC---
T ss_pred             CCEEEEeCCCC
Confidence            89999999863

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.08  E-value=6.3e-10  Score=89.01  Aligned_cols=80  Identities=13%  Similarity=0.062  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEee-CCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD-VSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~  157 (173)
                      .+++++||||+|+||.++++.|+++|++|++++|+.+...  ...+...   ..+.++.+| ++|.+++.++++      
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~---~~v~~v~~D~l~d~~~l~~~~~------   72 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI---PNVTLFQGPLLNNVPLMDTLFE------   72 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS---TTEEEEESCCTTCHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc---CCcEEEECCccCCHHHHHHHHh------
Confidence            3678999999999999999999999999999999876542  1222211   247788999 999998887764      


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       .+|+||+|++..
T Consensus        73 -~~d~Vi~~a~~~   84 (352)
T 1xgk_A           73 -GAHLAFINTTSQ   84 (352)
T ss_dssp             -TCSEEEECCCST
T ss_pred             -cCCEEEEcCCCC
Confidence             589999998754

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.08  E-value=9.5e-11  Score=93.35  Aligned_cols=83  Identities=12%  Similarity=0.171  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++++++||||+|+||.++++.|++.| ++|++++|+.....  ...+    ..  +. +.+|++|.+.++++++.  ..
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~----~~--~~-~~~d~~~~~~~~~~~~~--~~  112 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL----VD--LN-IADYMDKEDFLIQIMAG--EE  112 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT----TT--SC-CSEEEEHHHHHHHHHTT--CC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc----cC--ce-EeeecCcHHHHHHHHhh--cc
Confidence            567889999999999999999999999 99999999764321  0111    11  22 57899999888877653  23


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+|||+||...
T Consensus       113 ~~~~d~Vih~A~~~~  127 (357)
T 2x6t_A          113 FGDVEAIFHEGACSS  127 (357)
T ss_dssp             CSSCCEEEECCSCCC
T ss_pred             cCCCCEEEECCcccC
Confidence            568999999999764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.07  E-value=1.4e-10  Score=89.46  Aligned_cols=62  Identities=18%  Similarity=0.243  Sum_probs=56.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+|+||.++++.|+++|++|++++|.                       .+|++|.+++++++++.     ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~-----~~d   58 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI-----RPH   58 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc-----CCC
Confidence            89999999999999999999999999999982                       37999999999988775     799


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +|||+||...
T Consensus        59 ~vi~~a~~~~   68 (287)
T 3sc6_A           59 IIIHCAAYTK   68 (287)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECCcccC
Confidence            9999999764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.07  E-value=3.4e-10  Score=88.59  Aligned_cols=66  Identities=17%  Similarity=0.256  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+++++||||+|+||.+++++|++.|++|++++|+.                      .+|++|.+++++++++.     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----
Confidence            357899999999999999999999999999887752                      26999999998888764     


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ++|+|||+||...
T Consensus        55 ~~d~vih~a~~~~   67 (321)
T 1e6u_A           55 RIDQVYLAAAKVG   67 (321)
T ss_dssp             CCSEEEECCCCCC
T ss_pred             CCCEEEEcCeecC
Confidence            7999999999764

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.06  E-value=1.2e-10  Score=91.00  Aligned_cols=71  Identities=23%  Similarity=0.242  Sum_probs=59.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           82 NVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      ++|||||+|+||.++++.|+++  |++|++++|+....+             .+.++.+|++|.+++++++++.     +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhhc-----C
Confidence            3899999999999999999998  789999998754321             2456789999999998887652     7


Q ss_pred             ccEEEEcccCC
Q 030706          160 VDIWVFMSDLH  170 (173)
Q Consensus       160 id~lVn~AG~~  170 (173)
                      +|+|||+||..
T Consensus        63 ~d~vih~a~~~   73 (317)
T 3ajr_A           63 IDAIFHLAGIL   73 (317)
T ss_dssp             CCEEEECCCCC
T ss_pred             CcEEEECCccc
Confidence            99999999974

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=99.06  E-value=1.6e-09  Score=88.44  Aligned_cols=83  Identities=18%  Similarity=0.180  Sum_probs=70.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC---CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ++++|+|+ |+||+++++.|++.|   ..|++++|+.++.++..+++....+ .++..+.+|++|.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~-~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGY-GEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTC-CCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcC-CceEEEEecCCCHHHHHHHHHhh----
Confidence            47899998 899999999999998   3899999999988888777765332 25778899999999999998876    


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       ++|+||||+|..
T Consensus        76 -~~DvVin~ag~~   87 (405)
T 4ina_A           76 -KPQIVLNIALPY   87 (405)
T ss_dssp             -CCSEEEECSCGG
T ss_pred             -CCCEEEECCCcc
Confidence             699999999853

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.05  E-value=1.1e-09  Score=73.38  Aligned_cols=74  Identities=14%  Similarity=0.161  Sum_probs=60.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      +++++|+|+ |++|..+++.|.+.| ++|++++|+++..+...    .  .  .+.++.+|+++.+++++++       .
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--~--~~~~~~~d~~~~~~~~~~~-------~   68 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--M--GVATKQVDAKDEAGLAKAL-------G   68 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--T--TCEEEECCTTCHHHHHHHT-------T
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--C--CCcEEEecCCCHHHHHHHH-------c
Confidence            468999999 999999999999999 89999999887655432    1  1  3566789999988777665       3


Q ss_pred             CccEEEEcccC
Q 030706          159 YVDIWVFMSDL  169 (173)
Q Consensus       159 ~id~lVn~AG~  169 (173)
                      ++|+||+++|.
T Consensus        69 ~~d~vi~~~~~   79 (118)
T 3ic5_A           69 GFDAVISAAPF   79 (118)
T ss_dssp             TCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            78999999875

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=99.05  E-value=1.9e-10  Score=82.12  Aligned_cols=77  Identities=14%  Similarity=0.035  Sum_probs=61.3

Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHH---HHHHHHHHHhCCceEEEEEeeCCCH--HHHHHHHHHHHHhcCCccEEEE
Q 030706           91 GIGYALAKEFLKAGDNVIICSRSAERVD---SAVQSLREEFGEQHVWGTKCDVSEG--NEVADLVAFAQKNLKYVDIWVF  165 (173)
Q Consensus        91 gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lVn  165 (173)
                      -++.++++.|++.|++|++..|+.....   +..+.+... +. ++..+.+|++++  ++++++++.+.+.+|+ |+|||
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~-G~-~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA-GM-DYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT-TC-EEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc-CC-eEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            4678999999999999999988654322   123333333 33 688889999999  9999999999998999 99999


Q ss_pred             cccCC
Q 030706          166 MSDLH  170 (173)
Q Consensus       166 ~AG~~  170 (173)
                      |||+.
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99974

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.04  E-value=1.8e-10  Score=91.30  Aligned_cols=81  Identities=20%  Similarity=0.172  Sum_probs=58.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .++.++++|||||+|+||.++++.|++.|++|++++|+..........+   ....++.++.+|+.+..           
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~-----------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL-----------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC-----------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh-----------
Confidence            3366789999999999999999999999999999998643211111111   11235888899998752           


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                       +.++|+|||+||...
T Consensus        89 -~~~~d~vih~A~~~~  103 (343)
T 2b69_A           89 -YIEVDQIYHLASPAS  103 (343)
T ss_dssp             -CCCCSEEEECCSCCS
T ss_pred             -hcCCCEEEECccccC
Confidence             457999999999753

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.04  E-value=1.1e-10  Score=90.18  Aligned_cols=72  Identities=25%  Similarity=0.319  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++++++||| +|+||.++++.|+++|++|++++|+.+..           . .++.++.+|++|.++++++++      +
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~-~~~~~~~~Dl~d~~~~~~~~~------~   62 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------P-AGVQTLIADVTRPDTLASIVH------L   62 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------C-TTCCEEECCTTCGGGCTTGGG------G
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------c-cCCceEEccCCChHHHHHhhc------C
Confidence            356899999 59999999999999999999999987542           1 247788999999998887664      3


Q ss_pred             CccEEEEcccC
Q 030706          159 YVDIWVFMSDL  169 (173)
Q Consensus       159 ~id~lVn~AG~  169 (173)
                      ++|+|||+||.
T Consensus        63 ~~d~vih~a~~   73 (286)
T 3gpi_A           63 RPEILVYCVAA   73 (286)
T ss_dssp             CCSEEEECHHH
T ss_pred             CCCEEEEeCCC
Confidence            69999999975

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.03  E-value=5.7e-11  Score=92.72  Aligned_cols=73  Identities=14%  Similarity=0.144  Sum_probs=57.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      +++|||||+|+||.++++.|+++|++|++++|+.+...+..        ...+.++.+|++|.+ +.++++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcC-------C-
Confidence            47999999999999999999999999999999765422211        124778899999987 554432       3 


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+|||+||..
T Consensus        64 d~vih~A~~~   73 (312)
T 3ko8_A           64 DVVFHFAANP   73 (312)
T ss_dssp             SEEEECCSSC
T ss_pred             CEEEECCCCC
Confidence            9999999964

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.03  E-value=3.5e-10  Score=97.39  Aligned_cols=81  Identities=19%  Similarity=0.178  Sum_probs=62.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHH-HHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNE-VADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~  154 (173)
                      ++.+++++||||+|+||.+++++|++. |++|++++|+....+...       ...++.++.+|++|.++ ++++++   
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~v~~Dl~d~~~~~~~~~~---  381 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK---  381 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-------TCTTEEEEECCTTTCHHHHHHHHH---
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-------cCCceEEEECCCCCcHHHHHHhhc---
Confidence            357789999999999999999999998 899999999865432211       11258889999998764 555543   


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                          ++|+||||||...
T Consensus       382 ----~~D~Vih~Aa~~~  394 (660)
T 1z7e_A          382 ----KCDVVLPLVAIAT  394 (660)
T ss_dssp             ----HCSEEEECCCCCC
T ss_pred             ----CCCEEEECceecC
Confidence                5899999999764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.01  E-value=4.8e-10  Score=86.91  Aligned_cols=65  Identities=23%  Similarity=0.261  Sum_probs=56.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++||||+|+||.++++.|+ +|++|++++|+..                   ++.+|++|.++++++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~-----~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 8999999998751                   2468999999998888764     699


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +|||+||...
T Consensus        57 ~vih~a~~~~   66 (299)
T 1n2s_A           57 VIVNAAAHTA   66 (299)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECcccCC
Confidence            9999999753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.99  E-value=3.3e-10  Score=94.63  Aligned_cols=83  Identities=16%  Similarity=0.112  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh---HHHHHHHHHH--------HhCCceEEEEEeeCCCHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER---VDSAVQSLRE--------EFGEQHVWGTKCDVSEGNEVA  147 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~--------~~~~~~~~~~~~Dv~~~~~v~  147 (173)
                      ..+++|||||+|+||.+++++|.+.|++|++++|+...   .+...+.+..        ... .++.++.+|+++++.+.
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMML-SNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHS-TTEEEEEEBTTBCSSCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhcc-CceEEEecCCcccccCC
Confidence            35799999999999999999999899999999998763   2222222221        122 36999999999987776


Q ss_pred             HHHHHHHHhcCCccEEEEcccCC
Q 030706          148 DLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       148 ~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                              ...++|+||||||..
T Consensus       228 --------~~~~~D~Vih~Aa~~  242 (508)
T 4f6l_B          228 --------LPENMDTIIHAGART  242 (508)
T ss_dssp             --------CSSCCSEEEECCCC-
T ss_pred             --------CccCCCEEEECCcee
Confidence                    346899999999975

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.98  E-value=2e-09  Score=82.99  Aligned_cols=70  Identities=16%  Similarity=0.078  Sum_probs=57.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      ++++|||+ |+||.++++.|+++|++|++++|+....+....      .  .+.++.+|++|.+            +.++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~--~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------S--GAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------T--TEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------C--CCeEEEecccccc------------cCCC
Confidence            68999998 999999999999999999999998876543321      1  4888899999833            4579


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+|||+||...
T Consensus        65 d~vi~~a~~~~   75 (286)
T 3ius_A           65 THLLISTAPDS   75 (286)
T ss_dssp             CEEEECCCCBT
T ss_pred             CEEEECCCccc
Confidence            99999998754

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.95  E-value=5.4e-10  Score=87.35  Aligned_cols=73  Identities=14%  Similarity=0.179  Sum_probs=54.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |++|||||+|+||.++++.|+++|..|++..++....+..         ...+.++.+|++| +++.++++       ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            5799999999999999999999995555544443322111         1258889999999 88777664       79


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      |+|||+||..
T Consensus        65 d~vih~a~~~   74 (313)
T 3ehe_A           65 EEVWHIAANP   74 (313)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.91  E-value=6.5e-10  Score=86.27  Aligned_cols=70  Identities=14%  Similarity=0.197  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ++++++|||||+|+||.++++.|+++|+      +...             ....+.++.+|++|.+++.++++..    
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-------------~~~~~~~~~~D~~d~~~~~~~~~~~----   60 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-------------DWVFVSSKDADLTDTAQTRALFEKV----   60 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-------------EEEECCTTTCCTTSHHHHHHHHHHS----
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-------------cccccCceecccCCHHHHHHHHhhc----
Confidence            5678999999999999999999999997      1100             0012333478999999998888753    


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                       ++|+|||+||...
T Consensus        61 -~~d~Vih~A~~~~   73 (319)
T 4b8w_A           61 -QPTHVIHLAAMVG   73 (319)
T ss_dssp             -CCSEEEECCCCCC
T ss_pred             -CCCEEEECceecc
Confidence             6999999999854

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.89  E-value=9.9e-10  Score=85.38  Aligned_cols=79  Identities=13%  Similarity=0.177  Sum_probs=58.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      +++||||+|+||.+++++|+++| ++|++++|+.....  ...+.   .   +. +.+|++|.+.++++++...  ++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---~---~~-~~~d~~~~~~~~~~~~~~~--~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---D---LN-IADYMDKEDFLIQIMAGEE--FGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH---T---SC-CSEEEEHHHHHHHHHTTCC--CSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC---c---ce-eccccccHHHHHHHHhccc--cCCC
Confidence            38999999999999999999999 89999998765421  11111   1   11 5789998888777664210  2369


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+|||+||...
T Consensus        70 d~vi~~a~~~~   80 (310)
T 1eq2_A           70 EAIFHEGACSS   80 (310)
T ss_dssp             CEEEECCSCCC
T ss_pred             cEEEECccccc
Confidence            99999999764

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.86  E-value=2.8e-09  Score=83.06  Aligned_cols=81  Identities=25%  Similarity=0.379  Sum_probs=60.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|+++|||++ |+|+++++.|++.| +|++++|+.++.++..+++...... .. .+.+|+.+.          .+.
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~-~~-~~~~d~~~~----------~~~  190 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNK-KF-GEEVKFSGL----------DVD  190 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTC-CH-HHHEEEECT----------TCC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccc-cc-ceeEEEeeH----------HHh
Confidence            3678999999997 99999999999999 9999999988877777766543211 00 123455441          345


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++++|+||||+|+..
T Consensus       191 ~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          191 LDGVDIIINATPIGM  205 (287)
T ss_dssp             CTTCCEEEECSCTTC
T ss_pred             hCCCCEEEECCCCCC
Confidence            678999999999754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.85  E-value=6.5e-09  Score=82.26  Aligned_cols=81  Identities=14%  Similarity=0.110  Sum_probs=60.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|||++||||+++++.+...|++|++++++++..+.. +++    +. .   ..+|.++.+++.+.+.++..  
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~----g~-~---~~~d~~~~~~~~~~~~~~~~--  212 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI----GF-D---AAFNYKTVNSLEEALKKASP--  212 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TC-S---EEEETTSCSCHHHHHHHHCT--
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc----CC-c---EEEecCCHHHHHHHHHHHhC--
Confidence            3689999999999999999999999999999999987665443 222    32 1   23588874555555555433  


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|||+|.
T Consensus       213 ~~~d~vi~~~g~  224 (333)
T 1v3u_A          213 DGYDCYFDNVGG  224 (333)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCCeEEEECCCh
Confidence            589999999984

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.85  E-value=1.1e-08  Score=74.96  Aligned_cols=79  Identities=18%  Similarity=0.176  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .|++++|+||+||||+++++.+...|++|++++++++..+..    .+ .+. ..   .+|..+.+..+.+.+...  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~-~g~-~~---~~d~~~~~~~~~~~~~~~--~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SR-LGV-EY---VGDSRSVDFADEILELTD--GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HT-TCC-SE---EEETTCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-cCC-CE---EeeCCcHHHHHHHHHHhC--CC
Confidence            578999999999999999999999999999999987654332    22 232 11   248877654444433221  13


Q ss_pred             CccEEEEccc
Q 030706          159 YVDIWVFMSD  168 (173)
Q Consensus       159 ~id~lVn~AG  168 (173)
                      ++|++|||+|
T Consensus       107 ~~D~vi~~~g  116 (198)
T 1pqw_A          107 GVDVVLNSLA  116 (198)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            6999999997

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.85  E-value=1.4e-10  Score=90.47  Aligned_cols=38  Identities=26%  Similarity=0.338  Sum_probs=34.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      +.++++|||||+|+||.++++.|+++|++|++++|+..
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            34689999999999999999999999999999999765

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.81  E-value=8.4e-09  Score=85.26  Aligned_cols=78  Identities=17%  Similarity=0.166  Sum_probs=60.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+|+++|+| +|++|+++++.|++.|++|++++|+.+..++..+    ..+  .+..+.+|++|.++++++++       
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~----~~~--~~~~~~~Dv~d~~~l~~~l~-------   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA----GVQ--HSTPISLDVNDDAALDAEVA-------   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT----TCT--TEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH----hcC--CceEEEeecCCHHHHHHHHc-------
Confidence            468899998 7999999999999999999999998765543322    112  26678899999988777653       


Q ss_pred             CccEEEEcccCC
Q 030706          159 YVDIWVFMSDLH  170 (173)
Q Consensus       159 ~id~lVn~AG~~  170 (173)
                      .+|+||||++..
T Consensus        68 ~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 KHDLVISLIPYT   79 (450)
T ss_dssp             TSSEEEECCC--
T ss_pred             CCcEEEECCccc
Confidence            699999999864

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.67  E-value=4e-07  Score=71.87  Aligned_cols=83  Identities=13%  Similarity=0.164  Sum_probs=63.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC---hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS---AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      ..+.+|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.++..+++....+. .+.  ..++.+.+++.+.+.
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~-~~~--~~~~~~~~~l~~~l~  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDC-KAQ--LFDIEDHEQLRKEIA  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSC-EEE--EEETTCHHHHHHHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCC-ceE--EeccchHHHHHhhhc
Confidence            3478999999997 7999999999999998 89999999   77788777777665442 233  446766655544332


Q ss_pred             HHHHhcCCccEEEEcccC
Q 030706          152 FAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       152 ~~~~~~g~id~lVn~AG~  169 (173)
                             ..|+|||+..+
T Consensus       226 -------~aDiIINaTp~  236 (315)
T 3tnl_A          226 -------ESVIFTNATGV  236 (315)
T ss_dssp             -------TCSEEEECSST
T ss_pred             -------CCCEEEECccC
Confidence                   58999998653

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.66  E-value=1.4e-07  Score=74.99  Aligned_cols=81  Identities=16%  Similarity=0.117  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..|++++|+|++|+||++++..+...|++|++++++++..+.. .+    .+. .   ..+|+++.+++.+.+.++... 
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~----~g~-~---~~~d~~~~~~~~~~~~~~~~~-  237 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RS----IGG-E---VFIDFTKEKDIVGAVLKATDG-  237 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HH----TTC-C---EEEETTTCSCHHHHHHHHHTS-
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HH----cCC-c---eEEecCccHhHHHHHHHHhCC-
Confidence            4688999999999999999999999999999999987765322 22    232 1   134888666676666665443 


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                       ++|++|+|+|.
T Consensus       238 -~~D~vi~~~g~  248 (347)
T 2hcy_A          238 -GAHGVINVSVS  248 (347)
T ss_dssp             -CEEEEEECSSC
T ss_pred             -CCCEEEECCCc
Confidence             79999999984

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.65  E-value=2.7e-08  Score=83.34  Aligned_cols=66  Identities=26%  Similarity=0.281  Sum_probs=51.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      ++++|||||+|+||.++++.|++.|++|++++|+....            .    .+.+|+.+..         .+.+.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~------------~----~v~~d~~~~~---------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP------------G----KRFWDPLNPA---------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT------------T----CEECCTTSCC---------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc------------c----ceeecccchh---------HHhcCC
Confidence            56899999999999999999999999999999986542            1    1456776431         223458


Q ss_pred             ccEEEEcccCC
Q 030706          160 VDIWVFMSDLH  170 (173)
Q Consensus       160 id~lVn~AG~~  170 (173)
                      +|+|||+||..
T Consensus       202 ~D~Vih~A~~~  212 (516)
T 3oh8_A          202 ADVLVHLAGEP  212 (516)
T ss_dssp             CSEEEECCCC-
T ss_pred             CCEEEECCCCc
Confidence            99999999975

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.63  E-value=8.7e-08  Score=74.03  Aligned_cols=76  Identities=16%  Similarity=0.285  Sum_probs=56.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++... +  .+     |+.+.+++       . .
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~-~--~~-----~~~~~~~~-------~-~  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT-G--SI-----QALSMDEL-------E-G  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG-S--SE-----EECCSGGG-------T-T
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc-C--Ce-----eEecHHHh-------c-c
Confidence            367899999998 79999999999999999999999988877766655321 1  12     22232221       1 1


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                       +.+|+||||+|..
T Consensus       179 -~~~DivVn~t~~~  191 (271)
T 1nyt_A          179 -HEFDLIINATSSG  191 (271)
T ss_dssp             -CCCSEEEECCSCG
T ss_pred             -CCCCEEEECCCCC
Confidence             6899999999864

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.60  E-value=9.3e-08  Score=76.38  Aligned_cols=32  Identities=25%  Similarity=0.441  Sum_probs=28.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~  113 (173)
                      +++||||+|+||++++++|+++|+ +|+.++|+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~   34 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ   34 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence            699999999999999999999998 77777663

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.59  E-value=7.9e-08  Score=75.81  Aligned_cols=80  Identities=19%  Similarity=0.172  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+||+||||++++..+...|++|+++++++++.+...+    . +. ..   .+|.++.+..+++.+...  .
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~-g~-~~---~~~~~~~~~~~~~~~~~~--~  207 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----A-GA-WQ---VINYREEDLVERLKEITG--G  207 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----H-TC-SE---EEETTTSCHHHHHHHHTT--T
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----c-CC-CE---EEECCCccHHHHHHHHhC--C
Confidence            358999999999999999999999999999999998766544322    2 32 11   347777655554443321  1


Q ss_pred             CCccEEEEccc
Q 030706          158 KYVDIWVFMSD  168 (173)
Q Consensus       158 g~id~lVn~AG  168 (173)
                      +++|++|+|+|
T Consensus       208 ~~~D~vi~~~g  218 (327)
T 1qor_A          208 KKVRVVYDSVG  218 (327)
T ss_dssp             CCEEEEEECSC
T ss_pred             CCceEEEECCc
Confidence            36999999998

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.57  E-value=1.2e-07  Score=75.18  Aligned_cols=82  Identities=16%  Similarity=0.149  Sum_probs=59.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..|++++|+|++|+||++++..+...|++|+++++++++.+...++    .+...    .+|..+.+++.+.+.++..  
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----~g~~~----~~d~~~~~~~~~~~~~~~~--  223 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK----FGFDD----AFNYKEESDLTAALKRCFP--  223 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----SCCSE----EEETTSCSCSHHHHHHHCT--
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----cCCce----EEecCCHHHHHHHHHHHhC--
Confidence            3688999999999999999999999999999999987665443212    23211    2477765455555554432  


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|+|+|.
T Consensus       224 ~~~d~vi~~~g~  235 (345)
T 2j3h_A          224 NGIDIYFENVGG  235 (345)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCCcEEEECCCH
Confidence            579999999984

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.57  E-value=1.4e-07  Score=78.33  Aligned_cols=79  Identities=15%  Similarity=0.152  Sum_probs=60.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+.+++++|+|+ |++|+++++.|++. |++|++++|+.++.++..+.    .   .+..+.+|+.|.+++.++++    
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~---~~~~~~~D~~d~~~l~~~l~----   87 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S---GSKAISLDVTDDSALDKVLA----   87 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G---TCEEEECCTTCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c---CCcEEEEecCCHHHHHHHHc----
Confidence            366789999997 99999999999998 68999999998766544322    1   24556789999888776653    


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                         .+|+|||+++..
T Consensus        88 ---~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ---DNDVVISLIPYT   99 (467)
T ss_dssp             ---TSSEEEECSCGG
T ss_pred             ---CCCEEEECCchh
Confidence               689999999863

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.57  E-value=2.9e-07  Score=63.80  Aligned_cols=75  Identities=21%  Similarity=0.332  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .++.++|+|+ |.+|..+++.|.+.|++|++++++++..+....    .    .+.++..|.++++.++++      ...
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~----~~~~~~gd~~~~~~l~~~------~~~   69 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E----GFDAVIADPTDESFYRSL------DLE   69 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEECCTTCHHHHHHS------CCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C----CCcEEECCCCCHHHHHhC------Ccc
Confidence            3467999998 779999999999999999999998876544322    1    245678899998876653      234


Q ss_pred             CccEEEEccc
Q 030706          159 YVDIWVFMSD  168 (173)
Q Consensus       159 ~id~lVn~AG  168 (173)
                      ..|++|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            6899998776

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.56  E-value=1.1e-07  Score=75.19  Aligned_cols=81  Identities=21%  Similarity=0.136  Sum_probs=58.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.+++++|+|++||||+++++.+...|++|+++++++++.+... +   . +. ..   .+|.++.+..+++.+.. . .
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~---~-g~-~~---~~d~~~~~~~~~i~~~~-~-~  212 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-K---L-GC-HH---TINYSTQDFAEVVREIT-G-G  212 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---H-TC-SE---EEETTTSCHHHHHHHHH-T-T
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---c-CC-CE---EEECCCHHHHHHHHHHh-C-C
Confidence            36789999999999999999999999999999999876654432 2   2 32 11   34777765555444332 1 2


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      .++|++|+|+|.
T Consensus       213 ~~~d~vi~~~g~  224 (333)
T 1wly_A          213 KGVDVVYDSIGK  224 (333)
T ss_dssp             CCEEEEEECSCT
T ss_pred             CCCeEEEECCcH
Confidence            369999999985

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.54  E-value=2.4e-07  Score=73.94  Aligned_cols=81  Identities=19%  Similarity=0.160  Sum_probs=58.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+||+||||++++..+...|++|+++++++++.+.. .++    +. .   ..+|..+.+..+++.+.. . .
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----g~-~---~~~~~~~~~~~~~~~~~~-~-~  229 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL----GA-A---AGFNYKKEDFSEATLKFT-K-G  229 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH----TC-S---EEEETTTSCHHHHHHHHT-T-T
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----CC-c---EEEecCChHHHHHHHHHh-c-C
Confidence            3588999999999999999999999999999999988765543 222    32 1   135777655444433321 1 1


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|+|+|.
T Consensus       230 ~~~d~vi~~~G~  241 (354)
T 2j8z_A          230 AGVNLILDCIGG  241 (354)
T ss_dssp             SCEEEEEESSCG
T ss_pred             CCceEEEECCCc
Confidence            369999999985

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.53  E-value=7.8e-08  Score=80.86  Aligned_cols=74  Identities=20%  Similarity=0.323  Sum_probs=49.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+|+++|||+ ||+|++++..|++.|++|++++|+.++.++..+++    +. ++.    ++.|   ++++      ..
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~----~~-~~~----~~~d---l~~~------~~  422 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI----GG-KAL----SLTD---LDNY------HP  422 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT----TC--CE----ETTT---TTTC--------
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CC-cee----eHHH---hhhc------cc
Confidence            67899999999 59999999999999999999999987776655543    21 222    2322   1100      12


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      +.+|+||||+|+.
T Consensus       423 ~~~DilVN~agvg  435 (523)
T 2o7s_A          423 EDGMVLANTTSMG  435 (523)
T ss_dssp             CCSEEEEECSSTT
T ss_pred             cCceEEEECCCCC
Confidence            3589999999974

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.52  E-value=2e-07  Score=73.78  Aligned_cols=81  Identities=19%  Similarity=0.133  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+|++|+||.+++..+...|++|+++++++++.+...++    .+...    .+|..+.+..+.+.+..   .
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----~g~~~----~~~~~~~~~~~~~~~~~---~  216 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE----LGFDG----AIDYKNEDLAAGLKREC---P  216 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCCSE----EEETTTSCHHHHHHHHC---T
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----cCCCE----EEECCCHHHHHHHHHhc---C
Confidence            3689999999999999999999999999999999988765543222    23211    24776655444333322   2


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|+|+|.
T Consensus       217 ~~~d~vi~~~g~  228 (336)
T 4b7c_A          217 KGIDVFFDNVGG  228 (336)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCceEEEECCCc
Confidence            479999999983

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.52  E-value=5.4e-07  Score=71.93  Aligned_cols=81  Identities=19%  Similarity=0.192  Sum_probs=57.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+|++||||.+++..+...|++|+++++++++.+.. .   + .+..    ..+|..+.+..+++.+..  ..
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~---~-~ga~----~~~d~~~~~~~~~~~~~~--~~  237 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-L---Q-NGAH----EVFNHREVNYIDKIKKYV--GE  237 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---H-TTCS----EEEETTSTTHHHHHHHHH--CT
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-H---H-cCCC----EEEeCCCchHHHHHHHHc--CC
Confidence            3588999999999999999999999999999999987765422 2   2 2321    135777655444433322  12


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|+|+|.
T Consensus       238 ~~~D~vi~~~G~  249 (351)
T 1yb5_A          238 KGIDIIIEMLAN  249 (351)
T ss_dssp             TCEEEEEESCHH
T ss_pred             CCcEEEEECCCh
Confidence            379999999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.51  E-value=1.1e-07  Score=65.49  Aligned_cols=77  Identities=16%  Similarity=0.268  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++++++|+|+ |++|..+++.|.+.|++|++++++++..+..    ... +   ..++..|.++.+.++++      ..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~-~---~~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY-A---THAVIANATEENELLSL------GI   68 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTT-C---SEEEECCTTCHHHHHTT------TG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh-C---CEEEEeCCCCHHHHHhc------CC
Confidence            45678999998 9999999999999999999999987553321    111 1   34567898886655432      23


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      ++.|++|++++.
T Consensus        69 ~~~d~vi~~~~~   80 (144)
T 2hmt_A           69 RNFEYVIVAIGA   80 (144)
T ss_dssp             GGCSEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            468999998874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.50  E-value=1.7e-07  Score=74.74  Aligned_cols=80  Identities=11%  Similarity=0.050  Sum_probs=56.4

Q ss_pred             CC--CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           79 PP--YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        79 ~~--k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .|  ++++|+|++||||++++..+...|+ +|+++++++++.+...++    .+..    ..+|..+.+..+. +.+...
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~----~g~~----~~~d~~~~~~~~~-~~~~~~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE----LGFD----AAINYKKDNVAEQ-LRESCP  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----SCCS----EEEETTTSCHHHH-HHHHCT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH----cCCc----eEEecCchHHHHH-HHHhcC
Confidence            57  8999999999999999999999999 999999987665443221    2321    2357776443333 322222


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +++|++|+|+|.
T Consensus       229 --~~~d~vi~~~G~  240 (357)
T 2zb4_A          229 --AGVDVYFDNVGG  240 (357)
T ss_dssp             --TCEEEEEESCCH
T ss_pred             --CCCCEEEECCCH
Confidence              379999999983

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.46  E-value=8.2e-07  Score=71.45  Aligned_cols=77  Identities=21%  Similarity=0.232  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+++++|+|+ |+||+.+++.+...|++|++++++++..+...+.    .+. .   +.+|+++.+++++++.      
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~----~g~-~---~~~~~~~~~~l~~~~~------  228 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV----FGG-R---VITLTATEANIKKSVQ------  228 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TTT-S---EEEEECCHHHHHHHHH------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCc-e---EEEecCCHHHHHHHHh------
Confidence            67899999999 9999999999999999999999988765543322    232 2   3567788777766553      


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       ..|+||+++|..
T Consensus       229 -~~DvVi~~~g~~  240 (369)
T 2eez_A          229 -HADLLIGAVLVP  240 (369)
T ss_dssp             -HCSEEEECCC--
T ss_pred             -CCCEEEECCCCC
Confidence             589999999865

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.42  E-value=5.5e-07  Score=71.59  Aligned_cols=81  Identities=20%  Similarity=0.253  Sum_probs=56.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.+++++|+|++++||+.++..+... |++|+++++++++.+.. +++    +...    .+|..+.+..+++. ++...
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~----g~~~----~~~~~~~~~~~~~~-~~~~~  238 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA----GADY----VINASMQDPLAEIR-RITES  238 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH----TCSE----EEETTTSCHHHHHH-HHTTT
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh----CCCE----EecCCCccHHHHHH-HHhcC
Confidence            36789999999999999999999998 99999999987665433 222    3211    24766654433322 22211


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                       +++|++|+|+|.
T Consensus       239 -~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 -KGVDAVIDLNNS  250 (347)
T ss_dssp             -SCEEEEEESCCC
T ss_pred             -CCceEEEECCCC
Confidence             589999999984

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.41  E-value=2.5e-06  Score=66.39  Aligned_cols=80  Identities=19%  Similarity=0.280  Sum_probs=59.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++..+++...+....+.  ..+..+   +.+.+.    
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~--~~~~~~---l~~~l~----  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARG---IEDVIA----  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEE--EECSTT---HHHHHH----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE--EcCHHH---HHHHHh----
Confidence            467899999998 7999999999999998 79999999999888888887655432333  233322   333322    


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                         ..|+|||+..+
T Consensus       194 ---~~DiVInaTp~  204 (283)
T 3jyo_A          194 ---AADGVVNATPM  204 (283)
T ss_dssp             ---HSSEEEECSST
T ss_pred             ---cCCEEEECCCC
Confidence               47999998653

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.40  E-value=9.7e-07  Score=70.42  Aligned_cols=80  Identities=23%  Similarity=0.205  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+||+|+||.+++..+...|++|+++++++++.+... +    .+...    .+|..+.+..+.+.+ ..  .
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~----lGa~~----~~~~~~~~~~~~~~~-~~--~  233 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-R----LGAKR----GINYRSEDFAAVIKA-ET--G  233 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H----HTCSE----EEETTTSCHHHHHHH-HH--S
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-h----cCCCE----EEeCCchHHHHHHHH-Hh--C
Confidence            36789999999999999999999999999999999887654332 2    23212    246666554444333 22  4


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|+|+|.
T Consensus       234 ~g~Dvvid~~g~  245 (353)
T 4dup_A          234 QGVDIILDMIGA  245 (353)
T ss_dssp             SCEEEEEESCCG
T ss_pred             CCceEEEECCCH
Confidence            579999999984

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.38  E-value=7.5e-06  Score=64.49  Aligned_cols=82  Identities=15%  Similarity=0.182  Sum_probs=60.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC---hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS---AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .+.+|+++|+|+ ||.|++++..|++.|+ +|+++.|+   .++.++..+++....+. .+.  ..+..+.+.+.+.+. 
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~-~v~--~~~~~~l~~~~~~l~-  219 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDC-VVT--VTDLADQHAFTEALA-  219 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSC-EEE--EEETTCHHHHHHHHH-
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCc-ceE--EechHhhhhhHhhcc-
Confidence            467899999997 8999999999999997 89999999   77777777777665442 233  345555433222222 


Q ss_pred             HHHhcCCccEEEEcccC
Q 030706          153 AQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~  169 (173)
                            ..|+|||+..+
T Consensus       220 ------~~DiIINaTp~  230 (312)
T 3t4e_A          220 ------SADILTNGTKV  230 (312)
T ss_dssp             ------HCSEEEECSST
T ss_pred             ------CceEEEECCcC
Confidence                  47999998654

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.35  E-value=5.1e-07  Score=69.92  Aligned_cols=34  Identities=35%  Similarity=0.445  Sum_probs=31.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      ++|||||+|.||.++++.|.++|++|+++.|++.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~   35 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG   35 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            5899999999999999999999999999999753

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.31  E-value=4.5e-07  Score=71.75  Aligned_cols=79  Identities=14%  Similarity=0.132  Sum_probs=52.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-------EEEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      .+++||||+|+||..++..|++.|.       +|+++++..  +..+.....+...  .  +.++ .|+.+.+++.+.+ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~--~~~~-~di~~~~~~~~a~-   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--A--FPLL-AGLEATDDPKVAF-   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--T--CTTE-EEEEEESCHHHHT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--c--cccc-CCeEeccChHHHh-
Confidence            4799999999999999999999885       899999864  2222222233221  0  1112 4665544444333 


Q ss_pred             HHHHhcCCccEEEEcccCCC
Q 030706          152 FAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       152 ~~~~~~g~id~lVn~AG~~~  171 (173)
                            ...|+|||.||...
T Consensus        79 ------~~~D~Vih~Ag~~~   92 (327)
T 1y7t_A           79 ------KDADYALLVGAAPR   92 (327)
T ss_dssp             ------TTCSEEEECCCCCC
T ss_pred             ------CCCCEEEECCCcCC
Confidence                  36899999999865

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.28  E-value=4.5e-06  Score=66.18  Aligned_cols=80  Identities=19%  Similarity=0.160  Sum_probs=56.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.+++++|+|++|+||+.++..+...|++|+++++++++.+... +    .+...    .+|..+.+..+. +.+... .
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~----~ga~~----~~d~~~~~~~~~-~~~~~~-~  233 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-A----LGADE----TVNYTHPDWPKE-VRRLTG-G  233 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H----HTCSE----EEETTSTTHHHH-HHHHTT-T
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h----cCCCE----EEcCCcccHHHH-HHHHhC-C
Confidence            35789999999999999999999999999999999877655432 2    23212    247776543222 222211 2


Q ss_pred             CCccEEEEccc
Q 030706          158 KYVDIWVFMSD  168 (173)
Q Consensus       158 g~id~lVn~AG  168 (173)
                      +++|++|+|+|
T Consensus       234 ~~~d~vi~~~g  244 (343)
T 2eih_A          234 KGADKVVDHTG  244 (343)
T ss_dssp             TCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            37999999998

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.26  E-value=1.7e-06  Score=68.21  Aligned_cols=81  Identities=16%  Similarity=0.132  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+||+|+||.+++..+...|++|+++++++++.+... +    .+...    .+|..+.+..+.+.+..  ..
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~----~Ga~~----~~~~~~~~~~~~~~~~~--~~  207 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-A----LGAWE----TIDYSHEDVAKRVLELT--DG  207 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-H----HTCSE----EEETTTSCHHHHHHHHT--TT
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H----cCCCE----EEeCCCccHHHHHHHHh--CC
Confidence            35889999999999999999988889999999999887654332 2    23212    24666654444333221  11


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      .++|++|+|+|.
T Consensus       208 ~g~Dvvid~~g~  219 (325)
T 3jyn_A          208 KKCPVVYDGVGQ  219 (325)
T ss_dssp             CCEEEEEESSCG
T ss_pred             CCceEEEECCCh
Confidence            369999999985

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.23  E-value=1.9e-06  Score=68.08  Aligned_cols=81  Identities=20%  Similarity=0.246  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+||+|+||.+++..+...|++|+++++++++.+.. .+    .+...    .+|..+.+..+.+.+..  ..
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~----~ga~~----~~~~~~~~~~~~~~~~~--~~  215 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KE----YGAEY----LINASKEDILRQVLKFT--NG  215 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH----TTCSE----EEETTTSCHHHHHHHHT--TT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH----cCCcE----EEeCCCchHHHHHHHHh--CC
Confidence            4688999999999999999998888999999999987765422 22    23212    24666544333332221  12


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      .++|++|+|+|.
T Consensus       216 ~g~D~vid~~g~  227 (334)
T 3qwb_A          216 KGVDASFDSVGK  227 (334)
T ss_dssp             SCEEEEEECCGG
T ss_pred             CCceEEEECCCh
Confidence            369999999984

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.22  E-value=6.7e-06  Score=63.42  Aligned_cols=76  Identities=16%  Similarity=0.323  Sum_probs=56.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++... +  .+..  .|+   +++.       + 
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~-~--~~~~--~~~---~~~~-------~-  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY-G--NIQA--VSM---DSIP-------L-  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG-S--CEEE--EEG---GGCC-------C-
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc-C--CeEE--eeH---HHhc-------c-
Confidence            367899999998 79999999999999999999999988877777665431 1  2222  333   1110       1 


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                       +..|+|||+++..
T Consensus       179 -~~~DivIn~t~~~  191 (272)
T 1p77_A          179 -QTYDLVINATSAG  191 (272)
T ss_dssp             -SCCSEEEECCCC-
T ss_pred             -CCCCEEEECCCCC
Confidence             4799999999864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.22  E-value=4.3e-06  Score=68.64  Aligned_cols=87  Identities=17%  Similarity=0.128  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEE-EEeeCC---------CHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWG-TKCDVS---------EGNEVA  147 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~~Dv~---------~~~~v~  147 (173)
                      -.|++++|+|++|+||.+.+..+...|++|+++++++++.+..    .+ .+...+.- -..|+.         +.++++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~----~~-lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV----RA-LGCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HH-TTCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----Hh-cCCCEEEecccccccccccccccccchhhh
Confidence            4689999999999999999988888999999999887665433    22 23212210 011221         123445


Q ss_pred             HHHHHHHHhcC-CccEEEEcccC
Q 030706          148 DLVAFAQKNLK-YVDIWVFMSDL  169 (173)
Q Consensus       148 ~~~~~~~~~~g-~id~lVn~AG~  169 (173)
                      .+.+++.+..| ++|++|+|+|.
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHHHHHhCCCceEEEECCCc
Confidence            55666665544 69999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.21  E-value=2.2e-06  Score=67.86  Aligned_cols=81  Identities=14%  Similarity=0.065  Sum_probs=56.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+|++++||..++..+...|++|+++++++++.+...+     .+...    .+|..+.+..+.+.+..  ..
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-----lga~~----~~~~~~~~~~~~~~~~~--~~  211 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-----LGAAY----VIDTSTAPLYETVMELT--NG  211 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-----HTCSE----EEETTTSCHHHHHHHHT--TT
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----CCCcE----EEeCCcccHHHHHHHHh--CC
Confidence            358899999999999999998888889999999998877654322     23212    23666544333332211  11


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      .++|++|+|+|.
T Consensus       212 ~g~Dvvid~~g~  223 (340)
T 3gms_A          212 IGADAAIDSIGG  223 (340)
T ss_dssp             SCEEEEEESSCH
T ss_pred             CCCcEEEECCCC
Confidence            379999999984

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.17  E-value=1.6e-05  Score=54.21  Aligned_cols=74  Identities=18%  Similarity=0.377  Sum_probs=52.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      +.++|+|+ |.+|..+++.|.+.|++|++++++++..+...    ...+   +.++..|.++.+.+.+      ......
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~----~~~~---~~~~~~d~~~~~~l~~------~~~~~~   70 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKAS----AEID---ALVINGDCTKIKTLED------AGIEDA   70 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HHCS---SEEEESCTTSHHHHHH------TTTTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH----HhcC---cEEEEcCCCCHHHHHH------cCcccC
Confidence            57889987 99999999999999999999999876554332    2212   3355678877665432      113467


Q ss_pred             cEEEEccc
Q 030706          161 DIWVFMSD  168 (173)
Q Consensus       161 d~lVn~AG  168 (173)
                      |++|.+.+
T Consensus        71 d~vi~~~~   78 (140)
T 1lss_A           71 DMYIAVTG   78 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEeeC
Confidence            88888764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.15  E-value=7.9e-06  Score=65.37  Aligned_cols=76  Identities=18%  Similarity=0.131  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh---hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +.|++++|+|+ |+||..++..+...|++|+++++++   ++.+. ..+    .+.   ..+  | .+ +..+++. + .
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~----~ga---~~v--~-~~-~~~~~~~-~-~  243 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEE----TKT---NYY--N-SS-NGYDKLK-D-S  243 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHH----HTC---EEE--E-CT-TCSHHHH-H-H
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHH----hCC---cee--c-hH-HHHHHHH-H-h
Confidence            45899999999 9999999998888999999999987   55422 222    232   222  6 54 3223332 2 2


Q ss_pred             HhcCCccEEEEcccCC
Q 030706          155 KNLKYVDIWVFMSDLH  170 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~  170 (173)
                       . +++|++|+++|..
T Consensus       244 -~-~~~d~vid~~g~~  257 (366)
T 2cdc_A          244 -V-GKFDVIIDATGAD  257 (366)
T ss_dssp             -H-CCEEEEEECCCCC
T ss_pred             -C-CCCCEEEECCCCh
Confidence             2 6899999999863

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.13  E-value=7e-07  Score=74.11  Aligned_cols=44  Identities=20%  Similarity=0.232  Sum_probs=38.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~  120 (173)
                      .++.||+++|||++ +||+++++.|...|++|+++++++....+.
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~A  304 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA  304 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            45889999999987 999999999999999999999987665443

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.13  E-value=1.1e-05  Score=64.02  Aligned_cols=79  Identities=14%  Similarity=0.083  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +++++|+||+|+||...+..+...|++|+++++++++.+... +    .+...    .+|..+.+..+.+.+.. .. .+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~----~Ga~~----~~~~~~~~~~~~v~~~~-~~-~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-D----IGAAH----VLNEKAPDFEATLREVM-KA-EQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-H----HTCSE----EEETTSTTHHHHHHHHH-HH-HC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H----cCCCE----EEECCcHHHHHHHHHHh-cC-CC
Confidence            379999999999999999888888999999999887755432 2    23212    23665544333333322 21 26


Q ss_pred             ccEEEEcccC
Q 030706          160 VDIWVFMSDL  169 (173)
Q Consensus       160 id~lVn~AG~  169 (173)
                      +|++|+++|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999884

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.11  E-value=8.6e-06  Score=64.61  Aligned_cols=78  Identities=22%  Similarity=0.157  Sum_probs=54.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+|++|+||.+++..+...|++|+++++++++.+... ++    +...+    .|..  +++.+.   +.+..
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~----ga~~v----~~~~--~~~~~~---v~~~~  223 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV----GADIV----LPLE--EGWAKA---VREAT  223 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH----TCSEE----EESS--TTHHHH---HHHHT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc----CCcEE----ecCc--hhHHHH---HHHHh
Confidence            35889999999999999999998889999999999887764332 22    32222    2444  233332   33332


Q ss_pred             -C-CccEEEEcccC
Q 030706          158 -K-YVDIWVFMSDL  169 (173)
Q Consensus       158 -g-~id~lVn~AG~  169 (173)
                       + ++|++|+|+|.
T Consensus       224 ~~~g~Dvvid~~g~  237 (342)
T 4eye_A          224 GGAGVDMVVDPIGG  237 (342)
T ss_dssp             TTSCEEEEEESCC-
T ss_pred             CCCCceEEEECCch
Confidence             2 69999999985

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.10  E-value=2e-05  Score=55.26  Aligned_cols=77  Identities=13%  Similarity=0.192  Sum_probs=53.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+.++|.|+ |.+|..+++.|.+.|++|+++++++ +..+.....    ... .+.++..|.++++.++++      ...
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~----~~~-~~~~i~gd~~~~~~l~~a------~i~   70 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR----LGD-NADVIPGDSNDSSVLKKA------GID   70 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH----HCT-TCEEEESCTTSHHHHHHH------TTT
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh----hcC-CCeEEEcCCCCHHHHHHc------Chh
Confidence            456888886 9999999999999999999999974 433332221    121 356778899888765543      123


Q ss_pred             CccEEEEccc
Q 030706          159 YVDIWVFMSD  168 (173)
Q Consensus       159 ~id~lVn~AG  168 (173)
                      ..|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (153)
T 1id1_A           71 RCRAILALSD   80 (153)
T ss_dssp             TCSEEEECSS
T ss_pred             hCCEEEEecC
Confidence            6787777654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.08  E-value=1.1e-05  Score=66.40  Aligned_cols=87  Identities=18%  Similarity=0.162  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEE-Eee--------CCCHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGT-KCD--------VSEGNEVAD  148 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~D--------v~~~~~v~~  148 (173)
                      -.|.+++|+|++|+||...+..+...|++|+++++++++.+.. ++   . +...+.-. ..|        ..+.+++++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~---l-Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RA---M-GAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---H-TCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hh---h-CCcEEEecCcCcccccccccccchHHHHH
Confidence            4678999999999999999888888899999999877665433 22   2 32122110 011        235566677


Q ss_pred             HHHHHHHhcC--CccEEEEcccC
Q 030706          149 LVAFAQKNLK--YVDIWVFMSDL  169 (173)
Q Consensus       149 ~~~~~~~~~g--~id~lVn~AG~  169 (173)
                      +.+++.+..+  ++|++|+++|.
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHhCCCCCcEEEEcCCc
Confidence            7777766543  79999999884

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.08  E-value=2.8e-05  Score=62.30  Aligned_cols=77  Identities=23%  Similarity=0.212  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +.+++++|+|+ |++|++++..+...|++|++++|++++.+...+..    .. .+.   ++..+.+++.+.+       
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~----~~-~~~---~~~~~~~~~~~~~-------  228 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF----GS-RVE---LLYSNSAEIETAV-------  228 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GG-GSE---EEECCHHHHHHHH-------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhh----Cc-eeE---eeeCCHHHHHHHH-------
Confidence            56689999999 99999999999999999999999987766554332    11 121   1223444443322       


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      ...|++||++|+.
T Consensus       229 ~~~DvVI~~~~~~  241 (361)
T 1pjc_A          229 AEADLLIGAVLVP  241 (361)
T ss_dssp             HTCSEEEECCCCT
T ss_pred             cCCCEEEECCCcC
Confidence            2689999999864

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.06  E-value=1e-05  Score=63.24  Aligned_cols=77  Identities=18%  Similarity=0.211  Sum_probs=54.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++..+++....+         ++.+.++       +.+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~---------~~~~~~~-------~~~  200 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS---------AYFSLAE-------AET  200 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC---------CEECHHH-------HHH
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC---------ceeeHHH-------HHh
Confidence            367899999997 7999999999999997 999999998877665544321000         1112222       223


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                      .....|+|||+.+..
T Consensus       201 ~~~~aDivIn~t~~~  215 (297)
T 2egg_A          201 RLAEYDIIINTTSVG  215 (297)
T ss_dssp             TGGGCSEEEECSCTT
T ss_pred             hhccCCEEEECCCCC
Confidence            345789999998764

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.05  E-value=2.8e-05  Score=61.49  Aligned_cols=78  Identities=21%  Similarity=0.154  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..|++++|+|+ |+||..++..+...|++|+++++++++.+...    + .+...    .+|..+.+ +.+.+.++.   
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~-lGa~~----~~d~~~~~-~~~~~~~~~---  228 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----E-LGADL----VVNPLKED-AAKFMKEKV---  228 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----H-TTCSE----EECTTTSC-HHHHHHHHH---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-CCCCE----EecCCCcc-HHHHHHHHh---
Confidence            35789999999 88999999988889999999999877654332    2 23211    24776543 332233322   


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|+++|.
T Consensus       229 ~~~d~vid~~g~  240 (339)
T 1rjw_A          229 GGVHAAVVTAVS  240 (339)
T ss_dssp             SSEEEEEESSCC
T ss_pred             CCCCEEEECCCC
Confidence            689999999985

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.03  E-value=2.3e-05  Score=62.60  Aligned_cols=80  Identities=19%  Similarity=0.064  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+||+|+||..++..+...|++|+++++++++.+...    + .+...    .+|..+.+ +.+.+.+..  .
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----~-~Ga~~----~~~~~~~~-~~~~~~~~~--~  229 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK----S-LGCDR----PINYKTEP-VGTVLKQEY--P  229 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----H-TTCSE----EEETTTSC-HHHHHHHHC--T
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----H-cCCcE----EEecCChh-HHHHHHHhc--C
Confidence            35789999999999999999988889999999999876654332    2 23212    23555433 333333321  2


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|+|+|.
T Consensus       230 ~g~D~vid~~g~  241 (362)
T 2c0c_A          230 EGVDVVYESVGG  241 (362)
T ss_dssp             TCEEEEEECSCT
T ss_pred             CCCCEEEECCCH
Confidence            479999999984

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.00  E-value=4.2e-05  Score=58.24  Aligned_cols=82  Identities=24%  Similarity=0.280  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+++++|.|+ ||+|..+++.|+..|. +|+++|++.                   .+.+...+.+....+..++..+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            56788999986 7999999999999995 899999986                   66777777777665554566666


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMSD  168 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG  168 (173)
                      .++++ +.+++++       ...|+||++.+
T Consensus       108 ~~~~~-~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          108 ALLDD-AELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             SCCCH-HHHHHHH-------HTSSEEEECCS
T ss_pred             ccCCH-hHHHHHH-------hCCCEEEEeCC
Confidence            55653 3333332       25788888754

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.99  E-value=2.8e-05  Score=61.67  Aligned_cols=78  Identities=17%  Similarity=0.188  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .|++++|+||+|++|...+..+...|++|+++++++++.+...    + .+...+    +|..+  ++.+.+.+.  ..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~-lGa~~v----i~~~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK----K-MGADIV----LNHKE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH----H-HTCSEE----ECTTS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----h-cCCcEE----EECCc--cHHHHHHHh--CCC
Confidence            6889999999999999999888889999999999876654332    2 232222    24433  233333332  234


Q ss_pred             CccEEEEcccC
Q 030706          159 YVDIWVFMSDL  169 (173)
Q Consensus       159 ~id~lVn~AG~  169 (173)
                      .+|++|+++|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            79999999873

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.97  E-value=8e-06  Score=64.24  Aligned_cols=93  Identities=16%  Similarity=0.144  Sum_probs=59.1

Q ss_pred             CCCCE-EEEEcCC------------------chHHHHHHHHHHHcCCEEEEEecChhhHH------H--HHHHHHHH-hC
Q 030706           78 LPPYN-VLITGST------------------KGIGYALAKEFLKAGDNVIICSRSAERVD------S--AVQSLREE-FG  129 (173)
Q Consensus        78 ~~~k~-~lItGa~------------------~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~--~~~~l~~~-~~  129 (173)
                      +.||. +|||+|.                  |-+|.++|+.++++|+.|+++.+......      .  ....+... ..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            56777 9999875                  44999999999999999999987532100      0  01100000 00


Q ss_pred             CceEEEEEeeCCCHHHHHHHHHHH------------------------------HHhcCCccEEEEcccCC
Q 030706          130 EQHVWGTKCDVSEGNEVADLVAFA------------------------------QKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       130 ~~~~~~~~~Dv~~~~~v~~~~~~~------------------------------~~~~g~id~lVn~AG~~  170 (173)
                      ...+..+.+|+...+++.+.+.+.                              .+.++..|++|.+|++.
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVs  184 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVS  184 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCC
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchh
Confidence            012445566776666666655443                              24467899999999985

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.96  E-value=2.5e-05  Score=62.54  Aligned_cols=70  Identities=20%  Similarity=0.200  Sum_probs=54.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .++|.|+ |++|+.+++.|.+ .++|.+.+++.+.++...       .  .+..+.+|+.|.+++.++++       +.|
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~--~~~~~~~d~~d~~~l~~~~~-------~~D   79 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------E--FATPLKVDASNFDKLVEVMK-------EFE   79 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------T--TSEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------c--cCCcEEEecCCHHHHHHHHh-------CCC
Confidence            5888898 9999999998875 578999999877655431       1  24567899999988877764       579


Q ss_pred             EEEEcccC
Q 030706          162 IWVFMSDL  169 (173)
Q Consensus       162 ~lVn~AG~  169 (173)
                      +|||+++.
T Consensus        80 vVi~~~p~   87 (365)
T 3abi_A           80 LVIGALPG   87 (365)
T ss_dssp             EEEECCCG
T ss_pred             EEEEecCC
Confidence            99998864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.96  E-value=3.1e-05  Score=61.37  Aligned_cols=78  Identities=18%  Similarity=0.156  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|+++||+||+|+||...+..+...|++|+++ +++++.+.. .   + .+. ..    +| .+.+ +.+.+.+... .
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~---~-lGa-~~----i~-~~~~-~~~~~~~~~~-~  214 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-R---D-LGA-TP----ID-ASRE-PEDYAAEHTA-G  214 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-H---H-HTS-EE----EE-TTSC-HHHHHHHHHT-T
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-H---H-cCC-CE----ec-cCCC-HHHHHHHHhc-C
Confidence            358899999999999999999888899999998 666554322 2   2 232 22    45 3333 3333333221 2


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      .++|++|+++|-
T Consensus       215 ~g~D~vid~~g~  226 (343)
T 3gaz_A          215 QGFDLVYDTLGG  226 (343)
T ss_dssp             SCEEEEEESSCT
T ss_pred             CCceEEEECCCc
Confidence            369999999983

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.95  E-value=4e-05  Score=59.57  Aligned_cols=74  Identities=15%  Similarity=0.170  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~  156 (173)
                      -.|++++|+|++|++|..++..+...|++|+++++++++.+... +    .+...    .+|..+ .+..    +++   
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~----~ga~~----~~~~~~~~~~~----~~~---  187 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A----LGAEE----AATYAEVPERA----KAW---  187 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H----TTCSE----EEEGGGHHHHH----HHT---
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h----cCCCE----EEECCcchhHH----HHh---
Confidence            36889999999999999999988889999999999887755432 2    23212    235554 3222    222   


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                       +++|++|+ +|.
T Consensus       188 -~~~d~vid-~g~  198 (302)
T 1iz0_A          188 -GGLDLVLE-VRG  198 (302)
T ss_dssp             -TSEEEEEE-CSC
T ss_pred             -cCceEEEE-CCH
Confidence             57999999 875

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.94  E-value=7.4e-05  Score=57.94  Aligned_cols=74  Identities=12%  Similarity=0.217  Sum_probs=55.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++..+++...+   .+...  ++.+   +.        
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~--~~~~---l~--------  185 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQ--AFEQ---LK--------  185 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEE--EGGG---CC--------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEe--eHHH---hc--------
Confidence            467899999997 7999999999999995 99999999988888777765431   23332  2211   10        


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        ...|+|||+...
T Consensus       186 --~~aDiIInaTp~  197 (281)
T 3o8q_A          186 --QSYDVIINSTSA  197 (281)
T ss_dssp             --SCEEEEEECSCC
T ss_pred             --CCCCEEEEcCcC
Confidence              368999998654

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.93  E-value=0.00012  Score=57.03  Aligned_cols=90  Identities=16%  Similarity=0.226  Sum_probs=68.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      .+.+++++|.|+ ||+|..+++.|+..| .++.++|.+.                  .+.+...+.+.+..+..++..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            367788999986 799999999999999 5899998765                  56666777777777766788888


Q ss_pred             eeCCCHHHHHHHHHHHHHh----cCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKN----LKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~----~g~id~lVn~A  167 (173)
                      .++++.+.++.+++.+...    ....|+||.+.
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            8888777777776554321    13689999764

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.90  E-value=8.3e-05  Score=51.32  Aligned_cols=73  Identities=16%  Similarity=0.220  Sum_probs=52.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      +.++|.|. |.+|..+++.|.+.|++|++++++++..+...    ..    .+.++..|.++++.++++      .....
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~----g~~~i~gd~~~~~~l~~a------~i~~a   72 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ER----GVRAVLGNAANEEIMQLA------HLECA   72 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT----TCEEEESCTTSHHHHHHT------TGGGC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----Hc----CCCEEECCCCCHHHHHhc------CcccC
Confidence            35778886 78999999999999999999999987655432    21    245667888888765542      12356


Q ss_pred             cEEEEccc
Q 030706          161 DIWVFMSD  168 (173)
Q Consensus       161 d~lVn~AG  168 (173)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (140)
T 3fwz_A           73 KWLILTIP   80 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            77776544

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.89  E-value=5e-05  Score=61.24  Aligned_cols=78  Identities=17%  Similarity=0.215  Sum_probs=56.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.+++++|+|+ |+||+.+++.+...|++|++++++.+..+...+.    .+. .+   ..+..+.+++.+++.     
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~----~g~-~~---~~~~~~~~~l~~~l~-----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAE----FCG-RI---HTRYSSAYELEGAVK-----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TTT-SS---EEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHh----cCC-ee---EeccCCHHHHHHHHc-----
Confidence            367899999998 9999999999999999999999988765443322    232 11   234445555544432     


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                        ..|+||++++..
T Consensus       231 --~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 --RADLVIGAVLVP  242 (377)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --CCCEEEECCCcC
Confidence              589999988754

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.84  E-value=9.6e-05  Score=59.09  Aligned_cols=76  Identities=18%  Similarity=0.198  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .|++++|+|+ |+||...+..+...|++|+++++++++.+...++    .+...    .+|..+.+.++       +..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----lGa~~----v~~~~~~~~~~-------~~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN----FGADS----FLVSRDQEQMQ-------AAAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT----SCCSE----EEETTCHHHHH-------HTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----cCCce----EEeccCHHHHH-------HhhC
Confidence            6889999996 9999999998888999999999988765543322    23222    24666654332       2235


Q ss_pred             CccEEEEcccCC
Q 030706          159 YVDIWVFMSDLH  170 (173)
Q Consensus       159 ~id~lVn~AG~~  170 (173)
                      ++|++|+++|..
T Consensus       251 ~~D~vid~~g~~  262 (366)
T 1yqd_A          251 TLDGIIDTVSAV  262 (366)
T ss_dssp             CEEEEEECCSSC
T ss_pred             CCCEEEECCCcH
Confidence            799999999854

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.84  E-value=6.1e-05  Score=52.83  Aligned_cols=77  Identities=14%  Similarity=0.224  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..++.++|.|+ |.+|..+++.|.+.|++|++++++++..+....    ..   .+..+..|..+.+.+.+.      ..
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----~~---g~~~~~~d~~~~~~l~~~------~~   82 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----EF---SGFTVVGDAAEFETLKEC------GM   82 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----TC---CSEEEESCTTSHHHHHTT------TG
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----cC---CCcEEEecCCCHHHHHHc------Cc
Confidence            45678999986 999999999999999999999998876433210    11   133455677665443321      12


Q ss_pred             CCccEEEEccc
Q 030706          158 KYVDIWVFMSD  168 (173)
Q Consensus       158 g~id~lVn~AG  168 (173)
                      ...|++|.+.+
T Consensus        83 ~~ad~Vi~~~~   93 (155)
T 2g1u_A           83 EKADMVFAFTN   93 (155)
T ss_dssp             GGCSEEEECSS
T ss_pred             ccCCEEEEEeC
Confidence            35788877665

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.82  E-value=2.6e-05  Score=54.11  Aligned_cols=71  Identities=14%  Similarity=0.191  Sum_probs=51.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +++++|.|+ |++|+.+++.|...|++|++.+|+.+..++..+++    +. .+    .+..+.   ++++       ..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~----~~-~~----~~~~~~---~~~~-------~~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY----EY-EY----VLINDI---DSLI-------KN   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH----TC-EE----EECSCH---HHHH-------HT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh----CC-ce----EeecCH---HHHh-------cC
Confidence            789999996 99999999999999999999999988776655443    21 11    123332   2222       25


Q ss_pred             ccEEEEcccCC
Q 030706          160 VDIWVFMSDLH  170 (173)
Q Consensus       160 id~lVn~AG~~  170 (173)
                      .|++|++.+..
T Consensus        81 ~Divi~at~~~   91 (144)
T 3oj0_A           81 NDVIITATSSK   91 (144)
T ss_dssp             CSEEEECSCCS
T ss_pred             CCEEEEeCCCC
Confidence            89999988754

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.78  E-value=0.00016  Score=57.84  Aligned_cols=78  Identities=19%  Similarity=0.195  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+||+|+||...+..+...|++|++++ +.++.+. .+   + .+...    .+|..+.+..++    +.+ .
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~-~~---~-lGa~~----v~~~~~~~~~~~----~~~-~  246 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASEL-VR---K-LGADD----VIDYKSGSVEEQ----LKS-L  246 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HH---H-TTCSE----EEETTSSCHHHH----HHT-S
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHH-HH---H-cCCCE----EEECCchHHHHH----Hhh-c
Confidence            4678999999999999999888888899999888 4444332 22   2 23222    236655433222    222 3


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      +++|++|+++|..
T Consensus       247 ~g~D~vid~~g~~  259 (375)
T 2vn8_A          247 KPFDFILDNVGGS  259 (375)
T ss_dssp             CCBSEEEESSCTT
T ss_pred             CCCCEEEECCCCh
Confidence            5799999999853

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.77  E-value=7.3e-05  Score=53.77  Aligned_cols=77  Identities=18%  Similarity=0.122  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.++.++|.| .|.+|..+++.|.+. |++|++++++++..+..    ... +   +..+..|.++.+.++++     ..
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~-g---~~~~~gd~~~~~~l~~~-----~~  102 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSE-G---RNVISGDATDPDFWERI-----LD  102 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHT-T---CCEEECCTTCHHHHHTB-----CS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHC-C---CCEEEcCCCCHHHHHhc-----cC
Confidence            4456788888 589999999999999 99999999998765443    221 2   33455677776544321     01


Q ss_pred             cCCccEEEEccc
Q 030706          157 LKYVDIWVFMSD  168 (173)
Q Consensus       157 ~g~id~lVn~AG  168 (173)
                      ....|++|.+.+
T Consensus       103 ~~~ad~vi~~~~  114 (183)
T 3c85_A          103 TGHVKLVLLAMP  114 (183)
T ss_dssp             CCCCCEEEECCS
T ss_pred             CCCCCEEEEeCC
Confidence            245777777654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.76  E-value=0.00014  Score=53.79  Aligned_cols=73  Identities=21%  Similarity=0.279  Sum_probs=53.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .++|.|+ |.+|..+++.|.+.|+.|++++++++..+...+.    .   .+.++..|.++++.++++      .....|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~----~---~~~~i~gd~~~~~~l~~a------~i~~ad   67 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK----L---KATIIHGDGSHKEILRDA------EVSKND   67 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH----S---SSEEEESCTTSHHHHHHH------TCCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----c---CCeEEEcCCCCHHHHHhc------CcccCC
Confidence            4889996 8999999999999999999999998765543321    1   245677888887766543      234677


Q ss_pred             EEEEccc
Q 030706          162 IWVFMSD  168 (173)
Q Consensus       162 ~lVn~AG  168 (173)
                      ++|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            7776543

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.70  E-value=0.00014  Score=58.09  Aligned_cols=79  Identities=20%  Similarity=0.207  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+| +|++|...+..+...|++|+++++++++.+.. ++    .+...    .+| .+.+++.+.+.++.. .
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~----lGa~~----vi~-~~~~~~~~~v~~~~~-g  255 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FA----LGADH----GIN-RLEEDWVERVYALTG-D  255 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HH----HTCSE----EEE-TTTSCHHHHHHHHHT-T
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HH----cCCCE----EEc-CCcccHHHHHHHHhC-C
Confidence            3678999999 89999999888888899999999987765442 22    23222    235 443344443333322 1


Q ss_pred             CCccEEEEccc
Q 030706          158 KYVDIWVFMSD  168 (173)
Q Consensus       158 g~id~lVn~AG  168 (173)
                      .++|++|+++|
T Consensus       256 ~g~D~vid~~g  266 (363)
T 3uog_A          256 RGADHILEIAG  266 (363)
T ss_dssp             CCEEEEEEETT
T ss_pred             CCceEEEECCC
Confidence            26999999998

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.68  E-value=0.00026  Score=56.29  Aligned_cols=86  Identities=19%  Similarity=0.090  Sum_probs=51.9

Q ss_pred             CC-CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH--HHHHHHHHHHHH
Q 030706           79 PP-YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG--NEVADLVAFAQK  155 (173)
Q Consensus        79 ~~-k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~--~~v~~~~~~~~~  155 (173)
                      .| .+++|+|++|++|...+..+...|++|+++.++.+..++..+.+.+. +...+    +|..+.  +++.+.+.++..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l-Ga~~v----i~~~~~~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL-GATQV----ITEDQNNSREFGPTIKEWIK  240 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH-TCSEE----EEHHHHHCGGGHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc-CCeEE----EecCccchHHHHHHHHHHhh
Confidence            57 89999999999999888777778999998887665432222333322 33222    232220  222222322220


Q ss_pred             -hcCCccEEEEcccC
Q 030706          156 -NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 -~~g~id~lVn~AG~  169 (173)
                       ..+++|++|.++|.
T Consensus       241 ~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          241 QSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHTCCEEEEEESSCH
T ss_pred             ccCCCceEEEECCCc
Confidence             22479999999873

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.68  E-value=0.00027  Score=56.28  Aligned_cols=83  Identities=18%  Similarity=0.069  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|.+++|.|+ |++|...+......|++ |+++++++++.+... ++    .. .+..+..|-.+.+++.+.+.+... .
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----~~-~~~~~~~~~~~~~~~~~~v~~~t~-g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI----CP-EVVTHKVERLSAEESAKKIVESFG-G  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH----CT-TCEEEECCSCCHHHHHHHHHHHTS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh----ch-hcccccccccchHHHHHHHHHHhC-C
Confidence            5789999998 99999988877778987 999998887654332 22    21 234344554445544443333211 2


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      .++|++|.++|.
T Consensus       251 ~g~Dvvid~~g~  262 (363)
T 3m6i_A          251 IEPAVALECTGV  262 (363)
T ss_dssp             CCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999884

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.64  E-value=0.00029  Score=57.23  Aligned_cols=73  Identities=25%  Similarity=0.385  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.|++++|.|+ |++|..+++.|...|+ +|++++|+.++.++...++    +. .  .  .+.   +++.+++      
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~----g~-~--~--~~~---~~l~~~l------  225 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----GG-E--A--VRF---DELVDHL------  225 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----TC-E--E--CCG---GGHHHHH------
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----CC-c--e--ecH---HhHHHHh------
Confidence            67899999998 9999999999999998 9999999887665544433    32 1  1  122   2333322      


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                       ...|+||++.|..
T Consensus       226 -~~aDvVi~at~~~  238 (404)
T 1gpj_A          226 -ARSDVVVSATAAP  238 (404)
T ss_dssp             -HTCSEEEECCSSS
T ss_pred             -cCCCEEEEccCCC
Confidence             2689999987754

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.64  E-value=0.00027  Score=55.80  Aligned_cols=78  Identities=14%  Similarity=0.161  Sum_probs=51.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+++||||+|.+|..++..|+..|  .+|++++++++  +....++.......++..    +.+.+++++.+       .
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al-------~   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL-------T   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH-------T
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc-------C
Confidence            369999999999999999999988  78999998765  223333433211112222    22333443333       3


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      ..|++|++||+..
T Consensus        76 gaDvVi~~ag~~~   88 (326)
T 1smk_A           76 GMDLIIVPAGVPR   88 (326)
T ss_dssp             TCSEEEECCCCCC
T ss_pred             CCCEEEEcCCcCC
Confidence            6899999999764

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.62  E-value=0.00011  Score=58.10  Aligned_cols=80  Identities=10%  Similarity=0.119  Sum_probs=53.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-------EEEEEecC----hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRS----AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADL  149 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~  149 (173)
                      .+++||||+|++|..++..|+..|.       .|++++++    .++.+....++......  +   ..|+....+..+.
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~--~---~~~i~~~~~~~~a   80 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFP--L---LAGMTAHADPMTA   80 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCT--T---EEEEEEESSHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccc--c---cCcEEEecCcHHH
Confidence            4799999999999999999999884       79999988    54455444555442111  1   1244333333332


Q ss_pred             HHHHHHhcCCccEEEEcccCCCC
Q 030706          150 VAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       150 ~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                             +...|++|+.||+..+
T Consensus        81 -------l~~aD~Vi~~ag~~~~   96 (329)
T 1b8p_A           81 -------FKDADVALLVGARPRG   96 (329)
T ss_dssp             -------TTTCSEEEECCCCCCC
T ss_pred             -------hCCCCEEEEeCCCCCC
Confidence                   3468999999997653

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.62  E-value=9.5e-05  Score=58.59  Aligned_cols=79  Identities=24%  Similarity=0.183  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|++++|+|+ |++|...+..+...|+ +|+++++++++.+... +    .+...    .+|..+.+ +.+.+.++.. .
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~----~Ga~~----~~~~~~~~-~~~~v~~~~~-g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-K----VGADY----VINPFEED-VVKEVMDITD-G  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-H----HTCSE----EECTTTSC-HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H----hCCCE----EECCCCcC-HHHHHHHHcC-C
Confidence            7889999999 9999999998888898 9999999876544322 2    23212    23655433 2222222211 1


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      .++|++|+++|.
T Consensus       235 ~g~D~vid~~g~  246 (348)
T 2d8a_A          235 NGVDVFLEFSGA  246 (348)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999884

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.61  E-value=6.6e-05  Score=59.40  Aligned_cols=77  Identities=19%  Similarity=0.204  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|.+++|+|+ |++|...+..+...|+ +|+++++++++.+... ++     ...    .+|..+. ++.+.+.++.  .
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-----a~~----v~~~~~~-~~~~~~~~~~--~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-----ADR----LVNPLEE-DLLEVVRRVT--G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-----CSE----EECTTTS-CHHHHHHHHH--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----HHh----ccCcCcc-CHHHHHHHhc--C
Confidence            6889999999 9999999888888898 9999999876543221 11     111    2455543 3333343332  3


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|+++|.
T Consensus       230 ~g~D~vid~~g~  241 (343)
T 2dq4_A          230 SGVEVLLEFSGN  241 (343)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.59  E-value=0.0004  Score=55.51  Aligned_cols=80  Identities=15%  Similarity=0.211  Sum_probs=53.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~  155 (173)
                      -.|++++|+|+ |++|...+..+...|+ +|+++++++++.+... +    .+...    .+|..+ .+++.+.+.++..
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~----lGa~~----vi~~~~~~~~~~~~~~~~~~  260 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V----FGATD----FVNPNDHSEPISQVLSKMTN  260 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H----TTCCE----EECGGGCSSCHHHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H----hCCce----EEeccccchhHHHHHHHHhC
Confidence            35789999995 9999998887777898 8999999887755332 2    23212    235543 1234444444332


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +++|++|+++|.
T Consensus       261 --~g~D~vid~~g~  272 (374)
T 1cdo_A          261 --GGVDFSLECVGN  272 (374)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.57  E-value=0.00024  Score=56.36  Aligned_cols=81  Identities=19%  Similarity=0.170  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH-h
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK-N  156 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~-~  156 (173)
                      .|++++|+|+ |++|...+..+...|++|+++++++++.+..    .+ .+...    .+|..+ .+..+++.+...+ .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~-lGa~~----~~~~~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----KN-CGADV----TLVVDPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HH-TTCSE----EEECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----HH-hCCCE----EEcCcccccHHHHHHHHhcccc
Confidence            5789999997 8999999888777899999999887665432    22 23222    235554 3333333322210 0


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      .+++|++|+++|.
T Consensus       238 g~g~D~vid~~g~  250 (352)
T 1e3j_A          238 GDLPNVTIDCSGN  250 (352)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2469999999874

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.57  E-value=0.00048  Score=54.26  Aligned_cols=78  Identities=18%  Similarity=0.172  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|++++|+|+ |++|...+..+...|++|+++++++++.+..    ++ .+...    .+|..+.+..+.+.    +..
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~-lGa~~----~i~~~~~~~~~~~~----~~~  230 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA----RR-LGAEV----AVNARDTDPAAWLQ----KEI  230 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH----HH-TTCSE----EEETTTSCHHHHHH----HHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HH-cCCCE----EEeCCCcCHHHHHH----HhC
Confidence            36789999987 8999998888888899999999988765432    22 23322    23665544333333    234


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      |++|++|.++|.
T Consensus       231 g~~d~vid~~g~  242 (340)
T 3s2e_A          231 GGAHGVLVTAVS  242 (340)
T ss_dssp             SSEEEEEESSCC
T ss_pred             CCCCEEEEeCCC
Confidence            689999999863

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.57  E-value=0.00023  Score=54.95  Aligned_cols=48  Identities=25%  Similarity=0.333  Sum_probs=42.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLR  125 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~  125 (173)
                      .+.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++..+++.
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            467999999997 6999999999999995 99999999988877776654

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.56  E-value=0.00016  Score=56.77  Aligned_cols=75  Identities=21%  Similarity=0.139  Sum_probs=48.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +++|+|++|++|...+..+...|++|+++++++++.+... +    .+...+    +|..+.+  .+.+.++  ..+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~----lGa~~~----i~~~~~~--~~~~~~~--~~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-V----LGAKEV----LAREDVM--AERIRPL--DKQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-H----TTCSEE----EECC-----------C--CSCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-H----cCCcEE----EecCCcH--HHHHHHh--cCCccc
Confidence            7999999999999999888888999999999877654432 2    232222    3554432  2222222  124799


Q ss_pred             EEEEcccC
Q 030706          162 IWVFMSDL  169 (173)
Q Consensus       162 ~lVn~AG~  169 (173)
                      ++|+++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999985

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.53  E-value=0.00064  Score=54.06  Aligned_cols=79  Identities=19%  Similarity=0.191  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.|.+++|+|+ |++|...+..+... |++|+++++++++.+..    ++ .+...    .+|..+.  +.+.+.++.. 
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~----~~-lGa~~----vi~~~~~--~~~~v~~~~~-  251 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA----ER-LGADH----VVDARRD--PVKQVMELTR-  251 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH----HH-TTCSE----EEETTSC--HHHHHHHHTT-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HH-hCCCE----EEeccch--HHHHHHHHhC-
Confidence            36789999999 89999888877778 99999999987665433    22 23322    2365554  3333333221 


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      ..++|++|.++|.
T Consensus       252 g~g~Dvvid~~G~  264 (359)
T 1h2b_A          252 GRGVNVAMDFVGS  264 (359)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCCcEEEECCCC
Confidence            1269999999884

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.51  E-value=0.00039  Score=53.55  Aligned_cols=41  Identities=37%  Similarity=0.349  Sum_probs=37.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~  121 (173)
                      +|+++|.|+ ||.|++++..|++.|.+|++++|+.++.++..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            789999996 89999999999999999999999998877765

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.50  E-value=0.00051  Score=54.86  Aligned_cols=80  Identities=13%  Similarity=0.163  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~  155 (173)
                      -.|++++|+|+ |++|...+..+...|+ +|+++++++++.+.. ++    .+...    .+|..+ .+++.+.+.++..
T Consensus       190 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~----lGa~~----vi~~~~~~~~~~~~~~~~~~  259 (374)
T 2jhf_A          190 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KE----VGATE----CVNPQDYKKPIQEVLTEMSN  259 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HH----TTCSE----EECGGGCSSCHHHHHHHHTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH----hCCce----EecccccchhHHHHHHHHhC
Confidence            35789999995 8999998888878898 899999988775433 22    23212    235443 1234433433322


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +++|++|+++|.
T Consensus       260 --~g~D~vid~~g~  271 (374)
T 2jhf_A          260 --GGVDFSFEVIGR  271 (374)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCcEEEECCCC
Confidence              479999999874

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.50  E-value=0.00071  Score=51.44  Aligned_cols=81  Identities=20%  Similarity=0.227  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+++++|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+...+.+....+..++..+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            56788999987 6899999999999994 888886642                   45566667776665554566555


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      .++++ +.+.++++       ..|+||++.
T Consensus       105 ~~~~~-~~~~~~~~-------~~DvVi~~~  126 (251)
T 1zud_1          105 QRLTG-EALKDAVA-------RADVVLDCT  126 (251)
T ss_dssp             SCCCH-HHHHHHHH-------HCSEEEECC
T ss_pred             ccCCH-HHHHHHHh-------cCCEEEECC
Confidence            44432 33333332       367777654

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.47  E-value=0.00038  Score=55.72  Aligned_cols=75  Identities=20%  Similarity=0.238  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .|.+++|+|+ |++|...+..+...|++|+++++++++.+... +    .+...    .+|..+.+.+++    +.   +
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~----lGa~~----vi~~~~~~~~~~----~~---~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-A----LGADE----VVNSRNADEMAA----HL---K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-H----HTCSE----EEETTCHHHHHT----TT---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H----cCCcE----EeccccHHHHHH----hh---c
Confidence            5789999997 89999988877778999999999887765432 2    23222    246666543322    21   5


Q ss_pred             CccEEEEcccCC
Q 030706          159 YVDIWVFMSDLH  170 (173)
Q Consensus       159 ~id~lVn~AG~~  170 (173)
                      ++|++|+++|..
T Consensus       257 g~Dvvid~~g~~  268 (369)
T 1uuf_A          257 SFDFILNTVAAP  268 (369)
T ss_dssp             CEEEEEECCSSC
T ss_pred             CCCEEEECCCCH
Confidence            799999999853

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.45  E-value=0.00078  Score=53.84  Aligned_cols=80  Identities=18%  Similarity=0.176  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~  155 (173)
                      -.|.+++|+|+ |++|...+..+...|+ +|+++++++++.+.. .+    .+...    .+|..+ .+++.+.+.++..
T Consensus       194 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~----lGa~~----vi~~~~~~~~~~~~v~~~~~  263 (376)
T 1e3i_A          194 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KA----LGATD----CLNPRELDKPVQDVITELTA  263 (376)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HH----TTCSE----EECGGGCSSCHHHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH----hCCcE----EEccccccchHHHHHHHHhC
Confidence            35789999995 8999998887777898 899999988775433 22    23212    235443 1234333433322


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +++|++|+++|.
T Consensus       264 --~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 --GGVDYSLDCAGT  275 (376)
T ss_dssp             --SCBSEEEESSCC
T ss_pred             --CCccEEEECCCC
Confidence              479999999874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.45  E-value=0.00095  Score=53.52  Aligned_cols=79  Identities=19%  Similarity=0.133  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC--CHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS--EGNEVADLVAFAQ  154 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~--~~~~v~~~~~~~~  154 (173)
                      -.|.+++|+| +|++|...+..+...| ++|+++++++++.+...    + .+...+    +|..  +.+++.+   ++.
T Consensus       194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~----~-lGa~~v----i~~~~~~~~~~~~---~v~  260 (380)
T 1vj0_A          194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----E-IGADLT----LNRRETSVEERRK---AIM  260 (380)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----H-TTCSEE----EETTTSCHHHHHH---HHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH----H-cCCcEE----EeccccCcchHHH---HHH
Confidence            3578999999 8999999988877789 59999999876654322    2 232222    3544  1333333   333


Q ss_pred             Hhc-C-CccEEEEcccC
Q 030706          155 KNL-K-YVDIWVFMSDL  169 (173)
Q Consensus       155 ~~~-g-~id~lVn~AG~  169 (173)
                      +.. + ++|++|+++|.
T Consensus       261 ~~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          261 DITHGRGADFILEATGD  277 (380)
T ss_dssp             HHTTTSCEEEEEECSSC
T ss_pred             HHhCCCCCcEEEECCCC
Confidence            332 2 69999999985

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.45  E-value=0.00017  Score=57.41  Aligned_cols=75  Identities=23%  Similarity=0.180  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~  156 (173)
                      -.|.+++|+|+ |++|...+..+...|++|+++++++++.+... +    .+...+    +|..+. +..    +++.  
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~----lGa~~v----~~~~~~~~~~----~~~~--  241 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-K----MGADHY----IATLEEGDWG----EKYF--  241 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-H----HTCSEE----EEGGGTSCHH----HHSC--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-H----cCCCEE----EcCcCchHHH----HHhh--
Confidence            35789999999 99999988877778999999999887654332 2    232222    354433 222    2221  


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                       +++|++|+++|.
T Consensus       242 -~~~D~vid~~g~  253 (360)
T 1piw_A          242 -DTFDLIVVCASS  253 (360)
T ss_dssp             -SCEEEEEECCSC
T ss_pred             -cCCCEEEECCCC
Confidence             589999999986

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.43  E-value=0.00088  Score=53.18  Aligned_cols=80  Identities=21%  Similarity=0.197  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC--CHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS--EGNEVADLVAFAQ  154 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~--~~~~v~~~~~~~~  154 (173)
                      -.|.+++|+|+ |++|...+..+...|+ +|+++++++++.+..    + ..+...    .+|..  +.+++.+.+.+..
T Consensus       170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~-~lGa~~----vi~~~~~~~~~~~~~i~~~~  239 (356)
T 1pl8_A          170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----K-EIGADL----VLQISKESPQEIARKVEGQL  239 (356)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----H-HTTCSE----EEECSSCCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----H-HhCCCE----EEcCcccccchHHHHHHHHh
Confidence            35789999996 8999998887777898 899999987664432    2 223222    23554  2233222222222


Q ss_pred             HhcCCccEEEEcccC
Q 030706          155 KNLKYVDIWVFMSDL  169 (173)
Q Consensus       155 ~~~g~id~lVn~AG~  169 (173)
                      .  +++|++|+++|.
T Consensus       240 ~--~g~D~vid~~g~  252 (356)
T 1pl8_A          240 G--CKPEVTIECTGA  252 (356)
T ss_dssp             T--SCCSEEEECSCC
T ss_pred             C--CCCCEEEECCCC
Confidence            1  579999999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.42  E-value=0.0003  Score=56.15  Aligned_cols=80  Identities=15%  Similarity=0.156  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~  155 (173)
                      -.|.++||+|+ |++|...+..+...|+ +|+++++++++.+... ++    +...+    +|..+ .+++.+.+.++..
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga~~v----i~~~~~~~~~~~~v~~~~~  258 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF----GATEC----INPQDFSKPIQEVLIEMTD  258 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH----TCSEE----ECGGGCSSCHHHHHHHHTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc----CCceE----eccccccccHHHHHHHHhC
Confidence            35789999996 8999998887777898 8999999887755432 22    32122    35443 1233333333322


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +++|++|+++|.
T Consensus       259 --~g~D~vid~~g~  270 (373)
T 2fzw_A          259 --GGVDYSFECIGN  270 (373)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCc
Confidence              479999999874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.42  E-value=0.00037  Score=55.92  Aligned_cols=80  Identities=20%  Similarity=0.209  Sum_probs=53.1

Q ss_pred             CCCEEEEEc-CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITG-STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItG-a~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|.+++|.| |+|++|...+..+...|++|+++++++++.+...    + .+...+    +|..+.+..+++.+.. .. 
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~----~-lGa~~~----~~~~~~~~~~~v~~~t-~~-  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK----A-QGAVHV----CNAASPTFMQDLTEAL-VS-  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH----H-TTCSCE----EETTSTTHHHHHHHHH-HH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----h-CCCcEE----EeCCChHHHHHHHHHh-cC-
Confidence            577899987 8999999888877778999999999877654332    2 232222    3555544333333222 21 


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      .++|++|.++|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            269999999884

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.42  E-value=0.00059  Score=54.41  Aligned_cols=78  Identities=22%  Similarity=0.230  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|.+++|+||+|++|...+..+.. .|++|+++++++++.+..    .+ .+...+    .|..+  ++.+.+.++  ..
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~----~~-lGad~v----i~~~~--~~~~~v~~~--~~  237 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV----KS-LGAHHV----IDHSK--PLAAEVAAL--GL  237 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH----HH-TTCSEE----ECTTS--CHHHHHHTT--CS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH----HH-cCCCEE----EeCCC--CHHHHHHHh--cC
Confidence            578999999999999887765554 489999999987665432    22 233222    34433  222222222  22


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|.++|.
T Consensus       238 ~g~Dvvid~~g~  249 (363)
T 4dvj_A          238 GAPAFVFSTTHT  249 (363)
T ss_dssp             CCEEEEEECSCH
T ss_pred             CCceEEEECCCc
Confidence            479999999873

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.38  E-value=0.0013  Score=52.25  Aligned_cols=62  Identities=18%  Similarity=0.337  Sum_probs=47.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+++++|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+...+.+...++..++..+.
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~  110 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  110 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEe
Confidence            56788999986 699999999999999 5898987643                   35566677777776665666665


Q ss_pred             eeC
Q 030706          138 CDV  140 (173)
Q Consensus       138 ~Dv  140 (173)
                      .++
T Consensus       111 ~~i  113 (340)
T 3rui_A          111 LSI  113 (340)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            554

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.37  E-value=0.00052  Score=54.54  Aligned_cols=75  Identities=16%  Similarity=0.170  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHH-HHHH-HHcCCE-EEEEecChh---hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYAL-AKEF-LKAGDN-VIICSRSAE---RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~ai-a~~l-~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .+.+++|+|+ |++|... +..+ ...|++ |++++++++   +.+.. ++    .+.   ..+  |..+.+ +.+ +.+
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~----lGa---~~v--~~~~~~-~~~-i~~  238 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EE----LDA---TYV--DSRQTP-VED-VPD  238 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HH----TTC---EEE--ETTTSC-GGG-HHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HH----cCC---ccc--CCCccC-HHH-HHH
Confidence            3489999999 9999988 6655 567987 999999876   54332 22    232   222  555433 333 434


Q ss_pred             HHHhcCCccEEEEcccC
Q 030706          153 AQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~  169 (173)
                      +   .+++|++|.++|.
T Consensus       239 ~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          239 V---YEQMDFIYEATGF  252 (357)
T ss_dssp             H---SCCEEEEEECSCC
T ss_pred             h---CCCCCEEEECCCC
Confidence            3   3479999999884

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.37  E-value=0.00012  Score=56.75  Aligned_cols=42  Identities=21%  Similarity=0.364  Sum_probs=36.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~  119 (173)
                      .+.+|+++|+|+ ||+|++++..|.+.|+ +|++++|+.++.++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            367899999997 7999999999999998 89999999876544

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.37  E-value=0.00066  Score=55.13  Aligned_cols=42  Identities=21%  Similarity=0.260  Sum_probs=36.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~  120 (173)
                      +.+++++|+|+ |.+|+.+++.+...|++|++++++.+..+..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            57899999996 8999999999999999999999998776543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.35  E-value=0.0018  Score=50.56  Aligned_cols=76  Identities=9%  Similarity=0.107  Sum_probs=50.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEec--ChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSR--SAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r--~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++||||+|.+|..++..|+..|.  +++++|+  +.+.++....++.+... ...+.+.. |  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            589999999999999999998874  6888998  66555444445544311 11222222 2  2221           


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +...|++|+.||+..
T Consensus        68 ~~~aDvVi~~ag~~~   82 (303)
T 1o6z_A           68 TAGSDVVVITAGIPR   82 (303)
T ss_dssp             GTTCSEEEECCCCCC
T ss_pred             hCCCCEEEEcCCCCC
Confidence            236899999998764

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.35  E-value=0.00067  Score=53.91  Aligned_cols=76  Identities=21%  Similarity=0.231  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .|.+++|+|+ |++|...+..+...|++|+++++++++.+...+    ..+...+    .|..+.+.+.       +..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~----~lGa~~v----i~~~~~~~~~-------~~~~  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ----DLGADDY----VIGSDQAKMS-------ELAD  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT----TSCCSCE----EETTCHHHHH-------HSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH----HcCCcee----eccccHHHHH-------HhcC
Confidence            6889999995 999999888777789999999998766543321    2232222    3555543222       2235


Q ss_pred             CccEEEEcccCC
Q 030706          159 YVDIWVFMSDLH  170 (173)
Q Consensus       159 ~id~lVn~AG~~  170 (173)
                      ++|++|+++|..
T Consensus       244 g~D~vid~~g~~  255 (357)
T 2cf5_A          244 SLDYVIDTVPVH  255 (357)
T ss_dssp             TEEEEEECCCSC
T ss_pred             CCCEEEECCCCh
Confidence            799999999853

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.34  E-value=0.0003  Score=56.32  Aligned_cols=80  Identities=24%  Similarity=0.217  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH-Hh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ-KN  156 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~-~~  156 (173)
                      .|.+++|+|+ |++|...+..+...|+ +|+++++++++.+. .++    .+...    ..|..+.+..+.+ .+.. ..
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~----lGa~~----vi~~~~~~~~~~i-~~~~~~~  250 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEE----VGATA----TVDPSAGDVVEAI-AGPVGLV  250 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHH----HTCSE----EECTTSSCHHHHH-HSTTSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHH----cCCCE----EECCCCcCHHHHH-Hhhhhcc
Confidence            5789999998 8999998887777898 89999888766432 222    23222    2355554322222 2100 11


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      .|++|++|+++|.
T Consensus       251 ~gg~Dvvid~~G~  263 (370)
T 4ej6_A          251 PGGVDVVIECAGV  263 (370)
T ss_dssp             TTCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999873

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.33  E-value=0.00036  Score=55.15  Aligned_cols=77  Identities=16%  Similarity=0.147  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .|.+++|+|+ |++|...+..+...  |++|+++++++++.+... +    .+...+    +|..+.   +..++++.+ 
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~----lGa~~v----i~~~~~---~~~~~~~~~-  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-E----LGADYV----SEMKDA---ESLINKLTD-  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-H----HTCSEE----ECHHHH---HHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-H----hCCCEE----eccccc---hHHHHHhhc-
Confidence            6899999999 89999988877778  999999999877654332 2    232222    243220   122333322 


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      ..++|++|+++|.
T Consensus       236 g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 GLGASIAIDLVGT  248 (344)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCccEEEECCCC
Confidence            2279999999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.32  E-value=0.0006  Score=53.91  Aligned_cols=71  Identities=18%  Similarity=0.317  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|.+++|+|+ |++|...+..+...|++|+++++++++.+...    + .+...+.      .+.+.+.+         
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~-lGa~~v~------~~~~~~~~---------  233 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL----S-MGVKHFY------TDPKQCKE---------  233 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH----H-TTCSEEE------SSGGGCCS---------
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----h-cCCCeec------CCHHHHhc---------
Confidence            35889999997 89999988887788999999999887765332    2 2332222      33333221         


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                       ++|++|+++|..
T Consensus       234 -~~D~vid~~g~~  245 (348)
T 3two_A          234 -ELDFIISTIPTH  245 (348)
T ss_dssp             -CEEEEEECCCSC
T ss_pred             -CCCEEEECCCcH
Confidence             789999988754

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.32  E-value=0.00099  Score=53.16  Aligned_cols=80  Identities=15%  Similarity=0.234  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~  155 (173)
                      -.|.+++|+|+ |++|...+..+...|+ +|+++++++++.+... +    .+...+    +|..+ .+++.+.+.++..
T Consensus       190 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~----lGa~~v----i~~~~~~~~~~~~i~~~t~  259 (373)
T 1p0f_A          190 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E----LGATEC----LNPKDYDKPIYEVICEKTN  259 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H----TTCSEE----ECGGGCSSCHHHHHHHHTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H----cCCcEE----EecccccchHHHHHHHHhC
Confidence            35789999995 8999988877777898 8999998887654332 2    232221    34432 1223333333222


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                        +++|++|+++|.
T Consensus       260 --gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 --GGVDYAVECAGR  271 (373)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.27  E-value=0.0021  Score=51.28  Aligned_cols=79  Identities=14%  Similarity=0.068  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..|.+++|.|++|++|...+..+...|++|+.+. ++++.+ ..+    ..+...    .+|..+.+..++ +.++  ..
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~----~lGa~~----vi~~~~~~~~~~-v~~~--t~  229 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAK----SRGAEE----VFDYRAPNLAQT-IRTY--TK  229 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHH----HTTCSE----EEETTSTTHHHH-HHHH--TT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHH----HcCCcE----EEECCCchHHHH-HHHH--cc
Confidence            4678999999999999998888888899998886 555443 222    233322    236555443222 2222  12


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|.++|.
T Consensus       230 g~~d~v~d~~g~  241 (371)
T 3gqv_A          230 NNLRYALDCITN  241 (371)
T ss_dssp             TCCCEEEESSCS
T ss_pred             CCccEEEECCCc
Confidence            469999999884

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.25  E-value=0.00071  Score=54.16  Aligned_cols=80  Identities=20%  Similarity=0.209  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~  155 (173)
                      -.|.+++|+|+ |++|...+..+...|+ +|+++++++++.+.. .    ..+...    .+|..+ .+++.+.+.++. 
T Consensus       192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~----~lGa~~----vi~~~~~~~~~~~~i~~~~-  260 (378)
T 3uko_A          192 EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-K----KFGVNE----FVNPKDHDKPIQEVIVDLT-  260 (378)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-H----TTTCCE----EECGGGCSSCHHHHHHHHT-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-H----HcCCcE----EEccccCchhHHHHHHHhc-
Confidence            35788999998 9999988887777898 899999888765432 2    223212    234442 233344343332 


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                       .+++|++|.++|.
T Consensus       261 -~gg~D~vid~~g~  273 (378)
T 3uko_A          261 -DGGVDYSFECIGN  273 (378)
T ss_dssp             -TSCBSEEEECSCC
T ss_pred             -CCCCCEEEECCCC
Confidence             2479999999885

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.24  E-value=0.00079  Score=54.43  Aligned_cols=78  Identities=26%  Similarity=0.296  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.|.+++|+|+ |++|...+..+...|+ +|+++++++++.+.. ++    .+...    .+|..+.+..+    ++.+.
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~----lGa~~----vi~~~~~~~~~----~i~~~  277 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KE----LGADH----VIDPTKENFVE----AVLDY  277 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HH----HTCSE----EECTTTSCHHH----HHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH----cCCCE----EEcCCCCCHHH----HHHHH
Confidence            46789999998 8999988887777898 899999887665432 22    23322    23554443222    22332


Q ss_pred             c--CCccEEEEcccC
Q 030706          157 L--KYVDIWVFMSDL  169 (173)
Q Consensus       157 ~--g~id~lVn~AG~  169 (173)
                      .  .++|++|.++|.
T Consensus       278 t~g~g~D~vid~~g~  292 (404)
T 3ip1_A          278 TNGLGAKLFLEATGV  292 (404)
T ss_dssp             TTTCCCSEEEECSSC
T ss_pred             hCCCCCCEEEECCCC
Confidence            2  269999999875

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.24  E-value=0.0095  Score=45.73  Aligned_cols=43  Identities=21%  Similarity=0.195  Sum_probs=35.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~  123 (173)
                      -+++.|.|+ |.+|..++..|+..|++|++.+++++..+...+.
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            356777775 7899999999999999999999998877665554

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.22  E-value=0.00062  Score=53.23  Aligned_cols=75  Identities=16%  Similarity=0.132  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|.+++|+||+|++|...+..+...|++|+.+++. ++ .+..+   + .+...    ..|..+.+.+.       +..
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~~~~~---~-lGa~~----~i~~~~~~~~~-------~~~  213 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-HAFLK---A-LGAEQ----CINYHEEDFLL-------AIS  213 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-HHHHH---H-HTCSE----EEETTTSCHHH-------HCC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-HHHHH---H-cCCCE----EEeCCCcchhh-------hhc
Confidence            367899999999999999998888889999988753 22 22222   2 23322    23555543222       122


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      .++|++|+++|.
T Consensus       214 ~g~D~v~d~~g~  225 (321)
T 3tqh_A          214 TPVDAVIDLVGG  225 (321)
T ss_dssp             SCEEEEEESSCH
T ss_pred             cCCCEEEECCCc
Confidence            579999998873

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.20  E-value=0.0021  Score=50.37  Aligned_cols=79  Identities=15%  Similarity=0.197  Sum_probs=49.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEec--ChhhHHHHHHHHHHHhCC--ceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSR--SAERVDSAVQSLREEFGE--QHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r--~~~~~~~~~~~l~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +++||||+|++|..++..|+..|.  .++++++  +.+..+....++......  ..+.+...|  |  ++.       +
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~-------~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENL-------R   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCG-------G
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chH-------H
Confidence            589999999999999999998873  6888998  655444434444432110  112221111  1  111       1


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+...|++|+.||+..
T Consensus        71 al~gaD~Vi~~Ag~~~   86 (313)
T 1hye_A           71 IIDESDVVIITSGVPR   86 (313)
T ss_dssp             GGTTCSEEEECCSCCC
T ss_pred             HhCCCCEEEECCCCCC
Confidence            2347999999999764

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.19  E-value=0.00039  Score=55.27  Aligned_cols=38  Identities=24%  Similarity=0.260  Sum_probs=31.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      -.|.+++|+|++|++|...+..+...|++++++.+..+
T Consensus       166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            36789999999999999888776677998887776543

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=97.19  E-value=0.0023  Score=54.51  Aligned_cols=89  Identities=16%  Similarity=0.235  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.++.++|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+.+.+.+.+..+..++..+.
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~  402 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  402 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence            56788999986 699999999999999 5899998753                   35666777777777765676666


Q ss_pred             eeC-------CCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDV-------SEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv-------~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      .++       ++++....-.+.+.+.+...|+||++.
T Consensus       403 ~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~t  439 (615)
T 4gsl_A          403 LSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLV  439 (615)
T ss_dssp             CCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECC
T ss_pred             ccccccCccccchhhhcCCHHHHHHHhhcCCEEEecC
Confidence            554       222111111112222234579998875

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=97.17  E-value=0.0018  Score=52.14  Aligned_cols=81  Identities=22%  Similarity=0.178  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.|.+++|.|+ |++|...+..+...|+ +|+++++++++.+.. +    ..+. .    .+|..+.+.+.+.+.++.. 
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~----~lGa-~----~i~~~~~~~~~~~v~~~t~-  251 (398)
T 1kol_A          184 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-K----AQGF-E----IADLSLDTPLHEQIAALLG-  251 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-H----HTTC-E----EEETTSSSCHHHHHHHHHS-
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-H----HcCC-c----EEccCCcchHHHHHHHHhC-
Confidence            35789999995 9999988877777898 799999987665433 2    2232 2    2465544333322322211 


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ..++|++|.++|..
T Consensus       252 g~g~Dvvid~~G~~  265 (398)
T 1kol_A          252 EPEVDCAVDAVGFE  265 (398)
T ss_dssp             SSCEEEEEECCCTT
T ss_pred             CCCCCEEEECCCCc
Confidence            13699999999853

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.16  E-value=0.00051  Score=51.26  Aligned_cols=72  Identities=11%  Similarity=0.071  Sum_probs=51.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+..    .   .  .+.++..|.++++.++++      ....
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~----~---~--~~~~i~gd~~~~~~l~~a------~i~~   71 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL----R---S--GANFVHGDPTRVSDLEKA------NVRG   71 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH----H---T--TCEEEESCTTCHHHHHHT------TCTT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH----h---c--CCeEEEcCCCCHHHHHhc------Ccch
Confidence            457899997 8999999999999999 99999987764432    2   1  256678898888765543      1235


Q ss_pred             ccEEEEccc
Q 030706          160 VDIWVFMSD  168 (173)
Q Consensus       160 id~lVn~AG  168 (173)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (234)
T 2aef_A           72 ARAVIVDLE   80 (234)
T ss_dssp             CSEEEECCS
T ss_pred             hcEEEEcCC
Confidence            677776543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.14  E-value=0.0013  Score=52.41  Aligned_cols=81  Identities=21%  Similarity=0.364  Sum_probs=57.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+++++|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+...+.+....+..++..+.
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  194 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIA  194 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEee
Confidence            56788999987 799999999999999 5899998752                   24556667777766666677776


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      .++++..++.       + +...|+||.+.
T Consensus       195 ~~i~~~~~~~-------~-~~~~DlVvd~~  216 (353)
T 3h5n_A          195 LNINDYTDLH-------K-VPEADIWVVSA  216 (353)
T ss_dssp             CCCCSGGGGG-------G-SCCCSEEEECC
T ss_pred             cccCchhhhh-------H-hccCCEEEEec
Confidence            6666544221       1 34677777654

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.07  E-value=0.0015  Score=47.77  Aligned_cols=41  Identities=24%  Similarity=0.461  Sum_probs=35.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~  122 (173)
                      +++|+|++|.+|.++++.|++.|++|++++|+++..+...+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   42 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            57899999999999999999999999999998876655444

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.07  E-value=0.0014  Score=52.17  Aligned_cols=79  Identities=15%  Similarity=0.159  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.|++++|+|+ |++|...+..+...|+ +|+++++++++.+.. ++    .+...    .+|..+.+..++ +.+.  .
T Consensus       189 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~----lGa~~----vi~~~~~~~~~~-~~~~--~  255 (371)
T 1f8f_A          189 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQ----LGATH----VINSKTQDPVAA-IKEI--T  255 (371)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HH----HTCSE----EEETTTSCHHHH-HHHH--T
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HH----cCCCE----EecCCccCHHHH-HHHh--c
Confidence            35789999995 8999988887777898 699999887665432 22    23212    235544332222 2222  1


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      .+++|++|+++|.
T Consensus       256 ~gg~D~vid~~g~  268 (371)
T 1f8f_A          256 DGGVNFALESTGS  268 (371)
T ss_dssp             TSCEEEEEECSCC
T ss_pred             CCCCcEEEECCCC
Confidence            2379999999874

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.04  E-value=0.0015  Score=51.91  Aligned_cols=80  Identities=15%  Similarity=0.103  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHh-CCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEF-GEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +.++++.|+|++|.+|..++..++..|  .+|+++|.++++++....++.... ...++.+ .   +|   ..+.     
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d---~~~a-----   73 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SD---IKEA-----   73 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SC---HHHH-----
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CC---HHHH-----
Confidence            456789999999999999999999998  489999998877776666665431 1111221 1   12   1211     


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                        +..-|++|.+||...
T Consensus        74 --l~dADvVvitaG~p~   88 (343)
T 3fi9_A           74 --LTDAKYIVSSGGAPR   88 (343)
T ss_dssp             --HTTEEEEEECCC---
T ss_pred             --hCCCCEEEEccCCCC
Confidence              236899999998753

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.02  E-value=0.0044  Score=48.94  Aligned_cols=77  Identities=17%  Similarity=0.148  Sum_probs=53.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHhCC--ceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGE--QHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+.+.|+|+ |.+|.+++..|+..|.  +|+++|++++..+....++....+.  ..+.....|   .           +
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------~   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------E   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------H
Confidence            457899996 9999999999999985  8999999988777766666653211  123332222   1           1


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+..-|++|..||...
T Consensus        70 a~~~aDvVvi~ag~p~   85 (326)
T 3pqe_A           70 DCKDADIVCICAGANQ   85 (326)
T ss_dssp             GGTTCSEEEECCSCCC
T ss_pred             HhCCCCEEEEecccCC
Confidence            2346899999998754

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=97.01  E-value=0.0022  Score=51.68  Aligned_cols=81  Identities=21%  Similarity=0.198  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.|.+++|.|+ |++|...+..+...|+ +|+++++++++.+..    + ..+. .    .+|..+.+.+.+.+.++.. 
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~-~lGa-~----~i~~~~~~~~~~~~~~~~~-  251 (398)
T 2dph_A          184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----S-DAGF-E----TIDLRNSAPLRDQIDQILG-  251 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----H-TTTC-E----EEETTSSSCHHHHHHHHHS-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----H-HcCC-c----EEcCCCcchHHHHHHHHhC-
Confidence            35789999996 9999988877767898 999999987765432    2 2232 2    2465543321222222211 


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                      ..++|++|.++|..
T Consensus       252 g~g~Dvvid~~g~~  265 (398)
T 2dph_A          252 KPEVDCGVDAVGFE  265 (398)
T ss_dssp             SSCEEEEEECSCTT
T ss_pred             CCCCCEEEECCCCc
Confidence            12699999999853

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.97  E-value=0.0052  Score=49.49  Aligned_cols=83  Identities=13%  Similarity=0.095  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC-----------CCHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV-----------SEGNEV  146 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----------~~~~~v  146 (173)
                      ..+++++|.|+ |.+|..+++.+...|++|++++++.+..+...+ +    +.   .++..|+           -..+..
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l----Ga---~~~~l~~~~~~~~gya~~~~~~~~  252 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V----GA---QWLDLGIDAAGEGGYARELSEAER  252 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T----TC---EECCCC-------------CHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----CC---eEEeccccccccccchhhhhHHHH
Confidence            46789999998 799999999999999999999999877655432 1    21   2222221           001112


Q ss_pred             HHHHHHHHHhcCCccEEEEcccC
Q 030706          147 ADLVAFAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       147 ~~~~~~~~~~~g~id~lVn~AG~  169 (173)
                      ..-.+.+.+.....|++|+++.+
T Consensus       253 ~~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          253 AQQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHHHTTCSEEEECCCC
T ss_pred             hhhHHHHHHHHhcCCEEEECCCC
Confidence            22233444555689999998754

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.96  E-value=0.00091  Score=52.96  Aligned_cols=78  Identities=17%  Similarity=0.110  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.|.+++|+|+ |++|...+..+...|+ +|+++++++++.+.. .+    .+...    .+|..+.+..    +++.+.
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~----lGa~~----vi~~~~~~~~----~~v~~~  230 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LE----YGATD----IINYKNGDIV----EQILKA  230 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HH----HTCCE----EECGGGSCHH----HHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HH----hCCce----EEcCCCcCHH----HHHHHH
Confidence            35788999985 8999988877777898 899999887654322 22    23212    2344443322    233333


Q ss_pred             c-C-CccEEEEcccC
Q 030706          157 L-K-YVDIWVFMSDL  169 (173)
Q Consensus       157 ~-g-~id~lVn~AG~  169 (173)
                      . | ++|++|.++|.
T Consensus       231 t~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          231 TDGKGVDKVVIAGGD  245 (352)
T ss_dssp             TTTCCEEEEEECSSC
T ss_pred             cCCCCCCEEEECCCC
Confidence            2 2 69999999885

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.96  E-value=0.0018  Score=52.11  Aligned_cols=41  Identities=22%  Similarity=0.288  Sum_probs=36.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      +.+++++|+|+ |++|+.+++.+...|++|+++++++...+.
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~  210 (384)
T 1l7d_A          170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQ  210 (384)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            57899999996 899999999999999999999998876544

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.93  E-value=0.0025  Score=51.96  Aligned_cols=72  Identities=11%  Similarity=0.185  Sum_probs=50.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      ..++|.|. |-+|..+++.|.+.|..|++++++++..+...    .. +   +.++..|.++++.++++      ...+.
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~----~~-g---~~vi~GDat~~~~L~~a------gi~~A   69 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR----KF-G---MKVFYGDATRMDLLESA------GAAKA   69 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH----HT-T---CCCEESCTTCHHHHHHT------TTTTC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----hC-C---CeEEEcCCCCHHHHHhc------CCCcc
Confidence            35888886 78999999999999999999999987755432    21 1   34556787777755443      12356


Q ss_pred             cEEEEcc
Q 030706          161 DIWVFMS  167 (173)
Q Consensus       161 d~lVn~A  167 (173)
                      |+||.+.
T Consensus        70 ~~viv~~   76 (413)
T 3l9w_A           70 EVLINAI   76 (413)
T ss_dssp             SEEEECC
T ss_pred             CEEEECC
Confidence            6666554

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.93  E-value=0.0071  Score=47.85  Aligned_cols=80  Identities=10%  Similarity=0.157  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHH--hCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREE--FGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ...+.+.|+|+ |.+|..++..|+..|.  .|+++|++.+.++....++...  +... ...+..  .|.+         
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~-~~i~~~--~d~~---------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKT-PKIVSS--KDYS---------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSC-CEEEEC--SSGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCC-CeEEEc--CCHH---------
Confidence            34567899997 8999999999999985  8999999988777777777653  2211 111111  2222         


Q ss_pred             HHhcCCccEEEEcccCCCC
Q 030706          154 QKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~~  172 (173)
                        .+..-|++|..||+..+
T Consensus        84 --~~~~aDiVvi~aG~~~k  100 (331)
T 4aj2_A           84 --VTANSKLVIITAGARQQ  100 (331)
T ss_dssp             --GGTTEEEEEECCSCCCC
T ss_pred             --HhCCCCEEEEccCCCCC
Confidence              12368999999997653

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.93  E-value=0.011  Score=46.43  Aligned_cols=79  Identities=14%  Similarity=0.132  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC--hhhHHHHHHHHHHHh----CCceEEEEEeeCCCHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS--AERVDSAVQSLREEF----GEQHVWGTKCDVSEGNEVADLV  150 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~--~~~~~~~~~~l~~~~----~~~~~~~~~~Dv~~~~~v~~~~  150 (173)
                      ++.+.+.|+|+ |.+|..++..|+..|. +|++.|++  ++..+....++....    ...++...    +|.       
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t----~d~-------   73 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT----SDY-------   73 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE----SCG-------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc----CCH-------
Confidence            45678999996 9999999999999998 99999998  444444444443321    11122221    121       


Q ss_pred             HHHHHhcCCccEEEEcccCCCC
Q 030706          151 AFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       151 ~~~~~~~g~id~lVn~AG~~~~  172 (173)
                          +.+...|++|.+||...+
T Consensus        74 ----~a~~~aDvVIiaag~p~k   91 (315)
T 3tl2_A           74 ----ADTADSDVVVITAGIARK   91 (315)
T ss_dssp             ----GGGTTCSEEEECCSCCCC
T ss_pred             ----HHhCCCCEEEEeCCCCCC
Confidence                123468999998887653

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.91  E-value=0.01  Score=46.67  Aligned_cols=79  Identities=14%  Similarity=0.117  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.|.+++|.|+ |++|...+..+... |++|+++++++++.+..    ++ .+...+    .|..+ +..++ +.+... 
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~----~~-lGa~~~----i~~~~-~~~~~-v~~~t~-  236 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA----RE-VGADAA----VKSGA-GAADA-IRELTG-  236 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH----HH-TTCSEE----EECST-THHHH-HHHHHG-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HH-cCCCEE----EcCCC-cHHHH-HHHHhC-
Confidence            45789999998 99999877766666 68999999988765432    22 233222    23333 22222 222211 


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      ..++|++|.++|.
T Consensus       237 g~g~d~v~d~~G~  249 (345)
T 3jv7_A          237 GQGATAVFDFVGA  249 (345)
T ss_dssp             GGCEEEEEESSCC
T ss_pred             CCCCeEEEECCCC
Confidence            1279999999884

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.89  E-value=0.0076  Score=47.53  Aligned_cols=79  Identities=14%  Similarity=0.098  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHh----CCceEEEEEeeCCCHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF----GEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      ++.+.+.|+|+ |.+|.+++..|+..|. +|++.|++++..+....++....    ...++.. ..|   .+        
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~--------   71 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YA--------   71 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GG--------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HH--------
Confidence            34567899998 9999999999999997 99999999877665555554421    1112322 112   22        


Q ss_pred             HHHhcCCccEEEEcccCCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~~  172 (173)
                         .+..-|++|+.||+..+
T Consensus        72 ---a~~~aDiVIiaag~p~k   88 (324)
T 3gvi_A           72 ---AIEGADVVIVTAGVPRK   88 (324)
T ss_dssp             ---GGTTCSEEEECCSCCCC
T ss_pred             ---HHCCCCEEEEccCcCCC
Confidence               22368999999987543

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.86  E-value=0.0059  Score=51.86  Aligned_cols=62  Identities=18%  Similarity=0.332  Sum_probs=47.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecC-------------------hhhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.++.++|.|+ ||+|.++++.|+..| .++.++|.+                   ..+.+.+.+.+.+..+..++..+.
T Consensus       325 L~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~  403 (598)
T 3vh1_A          325 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  403 (598)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEe
Confidence            56788999986 699999999999999 589998654                   245667777777766665666665


Q ss_pred             eeC
Q 030706          138 CDV  140 (173)
Q Consensus       138 ~Dv  140 (173)
                      .++
T Consensus       404 ~~I  406 (598)
T 3vh1_A          404 LSI  406 (598)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            554

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.84  E-value=0.0033  Score=48.91  Aligned_cols=69  Identities=19%  Similarity=0.073  Sum_probs=45.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|.+++|+|+ |++|...+..+...|++|+.++ ++++.+.. ++    .+...  .+  |  |.   +++       .
T Consensus       141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~----lGa~~--v~--~--d~---~~v-------~  197 (315)
T 3goh_A          141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AK----RGVRH--LY--R--EP---SQV-------T  197 (315)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HH----HTEEE--EE--S--SG---GGC-------C
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HH----cCCCE--EE--c--CH---HHh-------C
Confidence            35889999999 9999988887777899999999 66655433 22    23211  12  2  21   211       3


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|.++|.
T Consensus       198 ~g~Dvv~d~~g~  209 (315)
T 3goh_A          198 QKYFAIFDAVNS  209 (315)
T ss_dssp             SCEEEEECC---
T ss_pred             CCccEEEECCCc
Confidence            579999998874

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.84  E-value=0.0059  Score=48.20  Aligned_cols=79  Identities=14%  Similarity=0.115  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHhCC-ceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..++.+.|+|+ |.+|.+++..|+..|.  +|+++|++++.++....++.....- ..+.... |  +.           
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~-----------   71 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EY-----------   71 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG-----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cH-----------
Confidence            34567899996 9999999999999885  8999999988777666666543210 1222222 1  22           


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+..-|++|+.||...
T Consensus        72 ~a~~~aDiVvi~ag~~~   88 (326)
T 3vku_A           72 SDAKDADLVVITAGAPQ   88 (326)
T ss_dssp             GGGTTCSEEEECCCCC-
T ss_pred             HHhcCCCEEEECCCCCC
Confidence            22347899999999754

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.82  E-value=0.0023  Score=49.52  Aligned_cols=44  Identities=14%  Similarity=0.210  Sum_probs=37.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAV  121 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~  121 (173)
                      .+.+|.++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            367899999997 6999999999999997 8999999987765543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.75  E-value=0.02  Score=45.66  Aligned_cols=90  Identities=12%  Similarity=0.137  Sum_probs=57.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH----------HHHHHhCCceEEEEEeeCCCHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ----------SLREEFGEQHVWGTKCDVSEGNE  145 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----------~l~~~~~~~~~~~~~~Dv~~~~~  145 (173)
                      .|++.+++.|.| .|-+|..+++.|++.|++|++.+|+++..+...+          ++.......++.++.  +.+. .
T Consensus        18 ~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~--vp~~-~   93 (358)
T 4e21_A           18 LYFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLM--VPAA-V   93 (358)
T ss_dssp             ----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEEC--SCGG-G
T ss_pred             hhhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEe--CCHH-H
Confidence            356677888887 5899999999999999999999999876655422          111111111344332  3333 6


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccC
Q 030706          146 VADLVAFAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       146 v~~~~~~~~~~~g~id~lVn~AG~  169 (173)
                      ++.+++++......=+++|++..+
T Consensus        94 v~~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           94 VDSMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHHHHHHGGGCCTTCEEEECSSC
T ss_pred             HHHHHHHHHhhCCCCCEEEeCCCC
Confidence            777777776655555677776544

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.74  E-value=0.009  Score=46.78  Aligned_cols=78  Identities=17%  Similarity=0.200  Sum_probs=49.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      ++.|+|++|.+|..++..|+..|  ..|+++|+++  .+....++.......++....    ...+.++.+       ..
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~-------~~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCL-------KG   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHH-------TT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHh-------CC
Confidence            58899999999999999999888  6899999987  333333443321111222211    011223222       36


Q ss_pred             ccEEEEcccCCCC
Q 030706          160 VDIWVFMSDLHSS  172 (173)
Q Consensus       160 id~lVn~AG~~~~  172 (173)
                      .|++|+.||....
T Consensus        69 aDvVvi~ag~~~~   81 (314)
T 1mld_A           69 CDVVVIPAGVPRK   81 (314)
T ss_dssp             CSEEEECCSCCCC
T ss_pred             CCEEEECCCcCCC
Confidence            8999999997653

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.74  E-value=0.013  Score=44.93  Aligned_cols=84  Identities=10%  Similarity=0.096  Sum_probs=56.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHHHH--------HHHhCCceEEEEEeeCCCHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSAERVDSAVQSL--------REEFGEQHVWGTKCDVSEGNEVADL  149 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~l--------~~~~~~~~~~~~~~Dv~~~~~v~~~  149 (173)
                      +++.|.|+ |.+|.+++..|++.|+   +|++.+|+++..++..+++        .+......+.++.+   .++.++.+
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~v   79 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMV   79 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHH
Confidence            45777776 8999999999999998   8999999988776655431        11111223444433   45778888


Q ss_pred             HHHHHHh-cCCccEEEEccc
Q 030706          150 VAFAQKN-LKYVDIWVFMSD  168 (173)
Q Consensus       150 ~~~~~~~-~g~id~lVn~AG  168 (173)
                      ++++... ...=.++|.+++
T Consensus        80 l~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           80 CEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHhhccCCCeEEEEecC
Confidence            8887765 433237776543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.67  E-value=0.0053  Score=49.21  Aligned_cols=46  Identities=22%  Similarity=0.321  Sum_probs=39.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~  123 (173)
                      .+.||+++|.|. |.+|..+++.|.+.|++|++.+++.+.+++..++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            488999999986 7899999999999999999999988766655444

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.65  E-value=0.0091  Score=46.22  Aligned_cols=80  Identities=15%  Similarity=0.097  Sum_probs=51.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      +++.|.||.|.||.+++..|.+.|++|++++++++...  .+.+    ....+.++.+-   ...+..+++++......=
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~--~~~~----~~aDvVilavp---~~~~~~vl~~l~~~l~~~   92 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA--ESIL----ANADVVIVSVP---INLTLETIERLKPYLTEN   92 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH--HHHH----TTCSEEEECSC---GGGHHHHHHHHGGGCCTT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCH--HHHh----cCCCEEEEeCC---HHHHHHHHHHHHhhcCCC
Confidence            46888998999999999999999999999998765311  1111    12245555432   334667777765444322


Q ss_pred             cEEEEcccC
Q 030706          161 DIWVFMSDL  169 (173)
Q Consensus       161 d~lVn~AG~  169 (173)
                      .+|++.+++
T Consensus        93 ~iv~~~~sv  101 (298)
T 2pv7_A           93 MLLADLTSV  101 (298)
T ss_dssp             SEEEECCSC
T ss_pred             cEEEECCCC
Confidence            356665554

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.64  E-value=0.0056  Score=48.44  Aligned_cols=79  Identities=14%  Similarity=0.220  Sum_probs=51.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--E-----EEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD--N-----VIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~--~-----V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      ..+.||||+|.||..++..|+..|.  +     ++++|.++  +..+....++...... -...  ..+.+  ..     
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~-~~~~--~~~~~--~~-----   73 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LLKD--VIATD--KE-----   73 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TEEE--EEEES--CH-----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhc-ccCC--EEEcC--Cc-----
Confidence            4689999999999999999998774  5     89999864  3455555556542111 1111  11111  11     


Q ss_pred             HHHHhcCCccEEEEcccCCC
Q 030706          152 FAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       152 ~~~~~~g~id~lVn~AG~~~  171 (173)
                        .+.+...|++|+.||...
T Consensus        74 --~~~~~daDvVvitAg~pr   91 (333)
T 5mdh_A           74 --EIAFKDLDVAILVGSMPR   91 (333)
T ss_dssp             --HHHTTTCSEEEECCSCCC
T ss_pred             --HHHhCCCCEEEEeCCCCC
Confidence              122347899999999764

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.59  E-value=0.01  Score=48.22  Aligned_cols=42  Identities=12%  Similarity=0.184  Sum_probs=36.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~  120 (173)
                      +.+.+++|.|+ |.+|..+++.+...|++|+++++++...+..
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  229 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQV  229 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            35678999998 7999999999999999999999998765443

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.58  E-value=0.022  Score=44.20  Aligned_cols=75  Identities=16%  Similarity=0.139  Sum_probs=50.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHh---C-CceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEF---G-EQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~-~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+.|+|+ |.+|.+++..|+..|.  +|++.|++++.++....++....   + ..++..  .  +|.+.          
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~--t--~d~~a----------   66 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG--G--ADYSL----------   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE--E--SCGGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEE--e--CCHHH----------
Confidence            4788898 9999999999999986  89999999877654333443321   1 112221  1  12222          


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                       +..-|++|..||...+
T Consensus        67 -~~~aDiVViaag~~~k   82 (294)
T 1oju_A           67 -LKGSEIIVVTAGLARK   82 (294)
T ss_dssp             -GTTCSEEEECCCCCCC
T ss_pred             -hCCCCEEEECCCCCCC
Confidence             2367999999987643

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.54  E-value=0.024  Score=44.57  Aligned_cols=78  Identities=17%  Similarity=0.238  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHh---C-CceEEEEEeeCCCHHHHHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF---G-EQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~---~-~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +.+.+.|+|+ |.+|.+++..|+..|. +|++.|++++..+....++....   + ..++.. .   .|.+         
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~-t---~d~~---------   69 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG-T---NDYK---------   69 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-E---SCGG---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE-c---CCHH---------
Confidence            3457888885 9999999999999887 99999999877765555565421   1 112221 1   1222         


Q ss_pred             HHhcCCccEEEEcccCCCC
Q 030706          154 QKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~~  172 (173)
                        .+..-|++|+.||+..+
T Consensus        70 --a~~~aDvVIi~ag~p~k   86 (321)
T 3p7m_A           70 --DLENSDVVIVTAGVPRK   86 (321)
T ss_dssp             --GGTTCSEEEECCSCCCC
T ss_pred             --HHCCCCEEEEcCCcCCC
Confidence              22368999999987643

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.51  E-value=0.0044  Score=51.13  Aligned_cols=71  Identities=14%  Similarity=0.297  Sum_probs=52.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .++|.|+ |-+|+.+|+.|.++|+.|++++.+++..+.....+       .+..+..|-++++-++++      ....-|
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A------gi~~ad   70 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA------GAQDAD   70 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH------TTTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc------CCCcCC
Confidence            5788876 68999999999999999999999988766544332       256678888888776654      123567


Q ss_pred             EEEEc
Q 030706          162 IWVFM  166 (173)
Q Consensus       162 ~lVn~  166 (173)
                      .+|..
T Consensus        71 ~~ia~   75 (461)
T 4g65_A           71 MLVAV   75 (461)
T ss_dssp             EEEEC
T ss_pred             EEEEE
Confidence            77654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.48  E-value=0.027  Score=42.62  Aligned_cols=78  Identities=12%  Similarity=0.095  Sum_probs=55.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           82 NVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      .+.|.|++|.+|+.+++.+.+. |.+|+......+.+++..    .. .   .. +.+|++.++.+...+..+.+.  ++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~----~~-~---~D-vvIDfT~p~a~~~~~~~a~~~--g~   70 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT----DG-N---TE-VVIDFTHPDVVMGNLEFLIDN--GI   70 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH----HT-T---CC-EEEECSCTTTHHHHHHHHHHT--TC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh----cc-C---Cc-EEEEccChHHHHHHHHHHHHc--CC
Confidence            5889999999999999998876 788875543333333222    11 1   11 457999999998888777665  68


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      ++||-..|+.
T Consensus        71 ~~VigTTG~~   80 (245)
T 1p9l_A           71 HAVVGTTGFT   80 (245)
T ss_dssp             EEEECCCCCC
T ss_pred             CEEEcCCCCC
Confidence            8888777653

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.46  E-value=0.018  Score=44.13  Aligned_cols=86  Identities=21%  Similarity=0.147  Sum_probs=56.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH-------HHHHhCCceEEEEEeeCCCHHHHHHHH---
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS-------LREEFGEQHVWGTKCDVSEGNEVADLV---  150 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dv~~~~~v~~~~---  150 (173)
                      +++.|.| .|.+|..++..|++.|++|++.+|+++..+...+.       +.+......+.+  .=+.+...++.++   
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi--~~vp~~~~~~~v~~~~   78 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTF--AMLADPAAAEEVCFGK   78 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEE--ECCSSHHHHHHHHHST
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEE--EEcCCHHHHHHHHcCc
Confidence            3577777 48999999999999999999999998876654321       111100112333  3455667778777   


Q ss_pred             HHHHHhcCCccEEEEcccC
Q 030706          151 AFAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       151 ~~~~~~~g~id~lVn~AG~  169 (173)
                      +++.....+=.++|+..++
T Consensus        79 ~~l~~~l~~~~~vi~~st~   97 (287)
T 3pef_A           79 HGVLEGIGEGRGYVDMSTV   97 (287)
T ss_dssp             TCHHHHCCTTCEEEECSCC
T ss_pred             chHhhcCCCCCEEEeCCCC
Confidence            6666655444567776543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.46  E-value=0.031  Score=43.89  Aligned_cols=75  Identities=13%  Similarity=0.161  Sum_probs=51.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHH---hC-CceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREE---FG-EQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~---~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +++.|.|+ |.+|..++..|+..|. +|++.|++++.++.....+...   .. ..++...    +|.+           
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d~~-----------   68 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS----NTYD-----------   68 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE----CCGG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC----CCHH-----------
Confidence            46888898 9999999999999997 8999999987776555544432   11 1123321    2222           


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+..-|++|.++|+..
T Consensus        69 al~~aD~Vi~a~g~p~   84 (322)
T 1t2d_A           69 DLAGADVVIVTAGFTK   84 (322)
T ss_dssp             GGTTCSEEEECCSCSS
T ss_pred             HhCCCCEEEEeCCCCC
Confidence            1236899999998653

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.45  E-value=0.0068  Score=47.61  Aligned_cols=79  Identities=16%  Similarity=0.191  Sum_probs=46.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ..|.+++|.|+ |++|...+..+... |++|+++++++++.+..     ...+...    .+|..+.+.++++.+..  .
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~-----~~~Ga~~----~i~~~~~~~~~~v~~~t--~  229 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLA-----KKIGADV----TINSGDVNPVDEIKKIT--G  229 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHH-----HHTTCSE----EEEC-CCCHHHHHHHHT--T
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhh-----hhcCCeE----EEeCCCCCHHHHhhhhc--C
Confidence            35789999987 67777777766655 68999999988764322     2223322    23555554444332211  1


Q ss_pred             cCCccEEEEccc
Q 030706          157 LKYVDIWVFMSD  168 (173)
Q Consensus       157 ~g~id~lVn~AG  168 (173)
                      ...+|.+|.++|
T Consensus       230 g~g~d~~~~~~~  241 (348)
T 4eez_A          230 GLGVQSAIVCAV  241 (348)
T ss_dssp             SSCEEEEEECCS
T ss_pred             CCCceEEEEecc
Confidence            125777887765

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.45  E-value=0.00029  Score=56.32  Aligned_cols=39  Identities=28%  Similarity=0.441  Sum_probs=34.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~  116 (173)
                      .+.||++.|.| .|.||+.+++.+.+.|++|++.|.+...
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            48899999997 5899999999999999999988887643

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.44  E-value=0.015  Score=46.44  Aligned_cols=66  Identities=14%  Similarity=0.096  Sum_probs=47.4

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      ..++.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++.....       ....   .++..|..|.+.+.++++
T Consensus         7 ~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~-------~~ad---~~~~~~~~d~~~l~~~~~   72 (377)
T 3orq_A            7 NKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR-------YVAH---EFIQAKYDDEKALNQLGQ   72 (377)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG-------GGSS---EEEECCTTCHHHHHHHHH
T ss_pred             ccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh-------hhCC---EEEECCCCCHHHHHHHHH
Confidence            34567899999986 579999999999999999999876542110       1111   234578888887777664

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.39  E-value=0.0061  Score=47.45  Aligned_cols=40  Identities=23%  Similarity=0.249  Sum_probs=34.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~  120 (173)
                      ++ ++|+|++|++|...+..+...|++|+++++++++.+..
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            45 99999999999998888888899999999988775443

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.39  E-value=0.036  Score=43.76  Aligned_cols=46  Identities=15%  Similarity=0.242  Sum_probs=38.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLRE  126 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~  126 (173)
                      .+.+.|+|+ |.+|..++..|+..|.  .|++.|.+++..+....++..
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~   68 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEH   68 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhh
Confidence            467899998 9999999999999985  899999998877766666654

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.38  E-value=0.023  Score=43.50  Aligned_cols=83  Identities=12%  Similarity=0.064  Sum_probs=52.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH------HHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS------LREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~------l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +++.|.|++|.+|.++++.|.+.|++|++.+|+++..+...+.      ..+......+.++.   .....++.+++++.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~a---v~~~~~~~v~~~l~   88 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLA---LPDNIIEKVAEDIV   88 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEEC---SCHHHHHHHHHHHG
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEc---CCchHHHHHHHHHH
Confidence            4789999989999999999999999999999988766554320      00000111233222   23444677777765


Q ss_pred             HhcCCccEEEEc
Q 030706          155 KNLKYVDIWVFM  166 (173)
Q Consensus       155 ~~~g~id~lVn~  166 (173)
                      ....+=.++|++
T Consensus        89 ~~l~~~~ivv~~  100 (286)
T 3c24_A           89 PRVRPGTIVLIL  100 (286)
T ss_dssp             GGSCTTCEEEES
T ss_pred             HhCCCCCEEEEC
Confidence            544322355554

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.38  E-value=0.012  Score=48.17  Aligned_cols=49  Identities=27%  Similarity=0.236  Sum_probs=37.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~  126 (173)
                      .+.+|.++|.|. |+.|.++|+.|.++|++|.+.|.+........+.+++
T Consensus         6 ~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~   54 (451)
T 3lk7_A            6 TFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLE   54 (451)
T ss_dssp             TTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHH
T ss_pred             hcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHh
Confidence            367899999998 7889999999999999999999865322233445544

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.36  E-value=0.061  Score=42.34  Aligned_cols=76  Identities=13%  Similarity=0.064  Sum_probs=51.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHH---hC-CceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREE---FG-EQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~---~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .++.|.|+ |.+|.+++..|+..|. +|++.+++++.++.....+...   .. ..++.+ .   +|.+   +.+     
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~---ea~-----   76 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YSYE---AAL-----   76 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CSHH---HHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CCHH---HHh-----
Confidence            46888998 9999999999999997 9999999987776644444332   11 112222 1   2322   112     


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                        ..-|++|..+|...
T Consensus        77 --~~aDiVi~a~g~p~   90 (331)
T 1pzg_A           77 --TGADCVIVTAGLTK   90 (331)
T ss_dssp             --TTCSEEEECCSCSS
T ss_pred             --CCCCEEEEccCCCC
Confidence              36899999998654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.35  E-value=0.0039  Score=48.77  Aligned_cols=38  Identities=32%  Similarity=0.454  Sum_probs=33.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      +++|+|++|++|...+..+...|++|+++++++++.+.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~  190 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY  190 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            79999999999999988888889999999998766543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.35  E-value=0.027  Score=43.42  Aligned_cols=85  Identities=12%  Similarity=0.126  Sum_probs=57.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH-------HHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS-------LREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +++.|.| .|.+|..+++.|++.|++|++.+|+++..+...+.       +.+... ..+.+  .=+.+...++.+++++
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi--~~vp~~~~~~~v~~~l   91 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIH--ITVLDDAQVREVVGEL   91 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEE--ECCSSHHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEE--EECCChHHHHHHHHHH
Confidence            4566776 57899999999999999999999998776654331       111111 13333  3456677788888877


Q ss_pred             HHhcCCccEEEEcccC
Q 030706          154 QKNLKYVDIWVFMSDL  169 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~  169 (173)
                      .....+=.++|++..+
T Consensus        92 ~~~l~~g~ivv~~st~  107 (296)
T 3qha_A           92 AGHAKPGTVIAIHSTI  107 (296)
T ss_dssp             HTTCCTTCEEEECSCC
T ss_pred             HHhcCCCCEEEEeCCC
Confidence            7655555677776544

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.34  E-value=0.084  Score=40.66  Aligned_cols=39  Identities=15%  Similarity=0.321  Sum_probs=34.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~  120 (173)
                      +++.|.|+ |.+|..++..|++.|++|++.+++++..+..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            56888887 8999999999999999999999998776654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.27  E-value=0.039  Score=43.85  Aligned_cols=83  Identities=13%  Similarity=0.102  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-------EEEEEecChh--hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSAE--RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-------~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      ++.-.+.|+||+|+||+.++..|+....       .+.+.|..+.  .++-...++...........+..  +|.   . 
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~---~-   95 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP---R-   95 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH---H-
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh---H-
Confidence            4455799999999999999999887542       6888888653  33444445554221111222111  121   1 


Q ss_pred             HHHHHHHhcCCccEEEEcccCCCC
Q 030706          149 LVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       149 ~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                            +.+..-|++|..||+..+
T Consensus        96 ------~a~~~advVvi~aG~prk  113 (345)
T 4h7p_A           96 ------VAFDGVAIAIMCGAFPRK  113 (345)
T ss_dssp             ------HHTTTCSEEEECCCCCCC
T ss_pred             ------HHhCCCCEEEECCCCCCC
Confidence                  224578999999998764

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.26  E-value=0.032  Score=43.51  Aligned_cols=87  Identities=16%  Similarity=0.257  Sum_probs=56.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH-------HHHHhCCceEEEEEeeCCCHHHHHHHHH-
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS-------LREEFGEQHVWGTKCDVSEGNEVADLVA-  151 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dv~~~~~v~~~~~-  151 (173)
                      .+++.|.|. |.+|..+++.|++.|++|++.+|+++..++..+.       +.+......+.+  .=+.+...++.++. 
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi--~~vp~~~~~~~v~~~  107 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVV--SMLENGAVVQDVLFA  107 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEE--ECCSSHHHHHHHHTT
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEE--EECCCHHHHHHHHcc
Confidence            356777765 8899999999999999999999998776654321       111111223333  34556667777776 


Q ss_pred             -HHHHhcCCccEEEEcccC
Q 030706          152 -FAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       152 -~~~~~~g~id~lVn~AG~  169 (173)
                       ++.+...+=.++|+...+
T Consensus       108 ~~~~~~l~~~~~vi~~st~  126 (320)
T 4dll_A          108 QGVAAAMKPGSLFLDMASI  126 (320)
T ss_dssp             TCHHHHCCTTCEEEECSCC
T ss_pred             hhHHhhCCCCCEEEecCCC
Confidence             565555555677776543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.24  E-value=0.033  Score=43.37  Aligned_cols=45  Identities=13%  Similarity=0.102  Sum_probs=36.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLRE  126 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~  126 (173)
                      +++.|+|+ |.+|..++..|+..|. +|+++|++++.++....++..
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~   48 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE   48 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence            46889998 9999999999999995 899999988777655555543

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.17  E-value=0.013  Score=50.26  Aligned_cols=82  Identities=13%  Similarity=0.223  Sum_probs=55.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+..++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+.+.+.+....+..++..+.
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            44578899986 799999999999999 5899988642                   23444556666655655777777


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      .++++......+       +...|+||++.
T Consensus        94 ~~i~~~~~~~~~-------~~~~DlVvda~  116 (640)
T 1y8q_B           94 DSIMNPDYNVEF-------FRQFILVMNAL  116 (640)
T ss_dssp             SCTTSTTSCHHH-------HTTCSEEEECC
T ss_pred             cccchhhhhHhh-------hcCCCEEEECC
Confidence            777543211122       24678888763

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.16  E-value=0.0047  Score=54.33  Aligned_cols=77  Identities=13%  Similarity=0.133  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|.++||.|++||+|.+.+......|++|++++.++ +.+.    +.  .+...+    .|..+.+..+    ++.+..
T Consensus       344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~----l~--lga~~v----~~~~~~~~~~----~i~~~t  408 (795)
T 3slk_A          344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQA----VE--LSREHL----ASSRTCDFEQ----QFLGAT  408 (795)
T ss_dssp             CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGG----SC--SCGGGE----ECSSSSTHHH----HHHHHS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhh----hh--cChhhe----eecCChhHHH----HHHHHc
Confidence            3678999999999999988877777899999988654 2211    11  222122    2444443323    233322


Q ss_pred             --CCccEEEEcccC
Q 030706          158 --KYVDIWVFMSDL  169 (173)
Q Consensus       158 --g~id~lVn~AG~  169 (173)
                        .++|++|++.|-
T Consensus       409 ~g~GvDvVld~~gg  422 (795)
T 3slk_A          409 GGRGVDVVLNSLAG  422 (795)
T ss_dssp             CSSCCSEEEECCCT
T ss_pred             CCCCeEEEEECCCc
Confidence              369999998763

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.16  E-value=0.024  Score=44.00  Aligned_cols=86  Identities=19%  Similarity=0.146  Sum_probs=54.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH-------HHHHhCCceEEEEEeeCCCHHHHHHHH---
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS-------LREEFGEQHVWGTKCDVSEGNEVADLV---  150 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dv~~~~~v~~~~---  150 (173)
                      +++.|.| .|.+|..++..|++.|++|++.+|+++..+...+.       +.+......+.+  .=+.+...++.++   
T Consensus        22 ~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi--~~vp~~~~~~~v~~~~   98 (310)
T 3doj_A           22 MEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTI--AMLSDPCAALSVVFDK   98 (310)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEE--ECCSSHHHHHHHHHST
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEE--EEcCCHHHHHHHHhCc
Confidence            4677776 58999999999999999999999998876654321       111000112333  3345566677766   


Q ss_pred             HHHHHhcCCccEEEEcccC
Q 030706          151 AFAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       151 ~~~~~~~g~id~lVn~AG~  169 (173)
                      +++......=.++|++..+
T Consensus        99 ~~l~~~l~~g~~vv~~st~  117 (310)
T 3doj_A           99 GGVLEQICEGKGYIDMSTV  117 (310)
T ss_dssp             TCGGGGCCTTCEEEECSCC
T ss_pred             hhhhhccCCCCEEEECCCC
Confidence            5554444444567776543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.15  E-value=0.015  Score=45.03  Aligned_cols=42  Identities=24%  Similarity=0.348  Sum_probs=36.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..+.+++++|.|+ |.||+++++.+...|++|++.+|+.+..+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~  194 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLA  194 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            3478999999996 89999999999999999999999876543

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.14  E-value=0.053  Score=40.86  Aligned_cols=85  Identities=16%  Similarity=0.190  Sum_probs=53.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHH--------HHhCCceEEEEEeeCCCHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLR--------EEFGEQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      .++.|.|+ |.+|..++..|.+.|++ |.+.+|+++..+...+.+.        +......+.++   ......++.+++
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~---av~~~~~~~v~~   86 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIV---SLKDSAFAELLQ   86 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEE---CCCHHHHHHHHH
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEE---ecCHHHHHHHHH
Confidence            45788886 89999999999999988 8899998877666544321        00011112221   233445677777


Q ss_pred             HHHHhcCCccEEEEcccC
Q 030706          152 FAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       152 ~~~~~~g~id~lVn~AG~  169 (173)
                      ++......=.++|++.+.
T Consensus        87 ~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           87 GIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHTTCCTTCEEEECCTT
T ss_pred             HHHhhcCCCcEEEECCCC
Confidence            776544333467776543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.14  E-value=0.0081  Score=46.46  Aligned_cols=43  Identities=23%  Similarity=0.406  Sum_probs=37.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..+.||+++|.|.++-+|+.++..|...|++|.++.+....++
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~  198 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS  198 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            3478999999999988999999999999999999988654443

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.13  E-value=0.063  Score=41.99  Aligned_cols=77  Identities=18%  Similarity=0.265  Sum_probs=50.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ...+.|+|+ |.+|..++..|+..|  ..|++.|.+++.++.....+....  ....+.+. .|  +.+           
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~-----------   70 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYS-----------   70 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHH-----------
Confidence            457888898 999999999999888  489999998876665445544321  10122222 12  222           


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                      .+..-|++|..+|...
T Consensus        71 a~~~aDvVvi~ag~~~   86 (317)
T 3d0o_A           71 DCHDADLVVICAGAAQ   86 (317)
T ss_dssp             GGTTCSEEEECCCCCC
T ss_pred             HhCCCCEEEECCCCCC
Confidence            2236899999888754

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.13  E-value=0.013  Score=48.12  Aligned_cols=80  Identities=19%  Similarity=0.270  Sum_probs=53.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+..++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+.+.+.+.+..+..++..+.
T Consensus        38 L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~  116 (434)
T 1tt5_B           38 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  116 (434)
T ss_dssp             HHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred             hcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence            35678899886 789999999999999 5888886431                   34555666676665555566666


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      .++.+..  ..+       +...|+||++.
T Consensus       117 ~~i~~~~--~~~-------~~~~DlVi~~~  137 (434)
T 1tt5_B          117 NKIQDFN--DTF-------YRQFHIIVCGL  137 (434)
T ss_dssp             SCGGGBC--HHH-------HTTCSEEEECC
T ss_pred             cccchhh--HHH-------hcCCCEEEECC
Confidence            5554321  111       23578888763

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.10  E-value=0.008  Score=46.04  Aligned_cols=43  Identities=21%  Similarity=0.367  Sum_probs=36.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~  120 (173)
                      .+.+++++|.|+ |++|++++..|.+.|++|++++|+.++.++.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l  168 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence            367889999996 7999999999999999999999987665443

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=96.09  E-value=0.011  Score=58.00  Aligned_cols=82  Identities=21%  Similarity=0.186  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|.++||.||+||+|.+.+......|++|++++.++++.+...+.+.. .+...+    .|..+.+..    +++.+..
T Consensus      1666 ~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~-lga~~v----~~~~~~~~~----~~i~~~t 1736 (2512)
T 2vz8_A         1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQ-LDETCF----ANSRDTSFE----QHVLRHT 1736 (2512)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT-CCSTTE----EESSSSHHH----HHHHHTT
T ss_pred             CCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCC-CCceEE----ecCCCHHHH----HHHHHhc
Confidence            3688999999999999988877777899999999887654433221100 121121    244444333    3333322


Q ss_pred             --CCccEEEEccc
Q 030706          158 --KYVDIWVFMSD  168 (173)
Q Consensus       158 --g~id~lVn~AG  168 (173)
                        .++|++|++.|
T Consensus      1737 ~g~GvDvVld~~g 1749 (2512)
T 2vz8_A         1737 AGKGVDLVLNSLA 1749 (2512)
T ss_dssp             TSCCEEEEEECCC
T ss_pred             CCCCceEEEECCC
Confidence              36999999875

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.08  E-value=0.0028  Score=49.87  Aligned_cols=83  Identities=11%  Similarity=-0.011  Sum_probs=52.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.|++++|.|++.-+|+.+++.|+..|++|++++|+.....+...++    .........+..++++++++.+.     
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~l----a~~~~~~t~~~~t~~~~L~e~l~-----  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL----KLNKHHVEDLGEYSEDLLKKCSL-----  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS----SCCCCEEEEEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHH----hhhcccccccccccHhHHHHHhc-----
Confidence            588999999998877899999999999999999988732211110011    00001111112234455555554     


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                        .-|+||.+.|..
T Consensus       245 --~ADIVIsAtg~p  256 (320)
T 1edz_A          245 --DSDVVITGVPSE  256 (320)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --cCCEEEECCCCC
Confidence              469999988754

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.06  E-value=0.013  Score=45.01  Aligned_cols=43  Identities=19%  Similarity=0.294  Sum_probs=37.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~  120 (173)
                      +.||+++|.|.++-+|+.++..|...|++|+++.+....+++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~  190 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSM  190 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHh
Confidence            7899999999998899999999999999999998865555443

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.06  E-value=0.014  Score=44.24  Aligned_cols=45  Identities=27%  Similarity=0.352  Sum_probs=37.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~  123 (173)
                      .+.+ +++|.|+ |++|+++++.|.+.|++|++++|+.++.++..++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~  158 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEE  158 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence            3667 8999996 7799999999999999999999998766555443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.01  E-value=0.021  Score=44.10  Aligned_cols=41  Identities=22%  Similarity=0.400  Sum_probs=36.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      .+.|++++|.|. |.||+++++.+...|++|++.+|+.+..+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            478999999995 89999999999999999999999876543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.00  E-value=0.062  Score=42.23  Aligned_cols=43  Identities=16%  Similarity=0.121  Sum_probs=35.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l  124 (173)
                      +.+.|.|+ |.+|..++..|+..|. +|++.|++++.++.....+
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l   58 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDL   58 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH
Confidence            47888898 9999999999999997 9999999987776543333

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.97  E-value=0.047  Score=39.94  Aligned_cols=73  Identities=19%  Similarity=0.163  Sum_probs=47.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +..+++.|.| .|.+|.+++..|++.|++|++.+|+++           ......+.++.+  - ...++.+++++....
T Consensus        17 ~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-----------~~~~aD~vi~av--~-~~~~~~v~~~l~~~~   81 (209)
T 2raf_A           17 FQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------ATTLGEIVIMAV--P-YPALAALAKQYATQL   81 (209)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-----------CSSCCSEEEECS--C-HHHHHHHHHHTHHHH
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-----------HhccCCEEEEcC--C-cHHHHHHHHHHHHhc
Confidence            5566788998 689999999999999999999998765           011123444332  2 556677777665444


Q ss_pred             CCccEEEEc
Q 030706          158 KYVDIWVFM  166 (173)
Q Consensus       158 g~id~lVn~  166 (173)
                      . =.++|+.
T Consensus        82 ~-~~~vi~~   89 (209)
T 2raf_A           82 K-GKIVVDI   89 (209)
T ss_dssp             T-TSEEEEC
T ss_pred             C-CCEEEEE
Confidence            3 2345544

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.95  E-value=0.073  Score=41.52  Aligned_cols=86  Identities=16%  Similarity=0.060  Sum_probs=54.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHH---------HHH-HhCCceEEEEEeeCCCHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQS---------LRE-EFGEQHVWGTKCDVSEGNEVA  147 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~---------l~~-~~~~~~~~~~~~Dv~~~~~v~  147 (173)
                      .+++.|.| .|.||.++++.|.+.|+  +|++.+++++..+...+.         +.+ ......+.++.+   -...+.
T Consensus        33 ~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilav---p~~~~~  108 (314)
T 3ggo_A           33 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS---PVRTFR  108 (314)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECS---CGGGHH
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeC---CHHHHH
Confidence            36788888 68999999999999998  999999998766554321         000 011112333322   233466


Q ss_pred             HHHHHHHHhcCCccEEEEcccC
Q 030706          148 DLVAFAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       148 ~~~~~~~~~~g~id~lVn~AG~  169 (173)
                      ++++++......=-+|+.++++
T Consensus       109 ~vl~~l~~~l~~~~iv~d~~Sv  130 (314)
T 3ggo_A          109 EIAKKLSYILSEDATVTDQGSV  130 (314)
T ss_dssp             HHHHHHHHHSCTTCEEEECCSC
T ss_pred             HHHHHHhhccCCCcEEEECCCC
Confidence            7777776655433456665554

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.94  E-value=0.0077  Score=47.27  Aligned_cols=71  Identities=10%  Similarity=0.059  Sum_probs=50.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      .+.++|.|+ |.+|..+++.|.+.|. |++++++++..+ ..    .  .  .+.++..|.+|++.++++      ...+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~--~--~~~~i~gd~~~~~~L~~a------~i~~  177 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R--S--GANFVHGDPTRVSDLEKA------NVRG  177 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----H--T--TCEEEESCTTSHHHHHHT------CSTT
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----h--C--CcEEEEeCCCCHHHHHhc------Chhh
Confidence            457999996 8999999999999999 999999887654 22    1  1  356778888888776643      1224


Q ss_pred             ccEEEEcc
Q 030706          160 VDIWVFMS  167 (173)
Q Consensus       160 id~lVn~A  167 (173)
                      .|.+|...
T Consensus       178 a~~vi~~~  185 (336)
T 1lnq_A          178 ARAVIVDL  185 (336)
T ss_dssp             EEEEEECC
T ss_pred             ccEEEEcC
Confidence            56555543

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.93  E-value=0.0016  Score=53.18  Aligned_cols=35  Identities=23%  Similarity=0.308  Sum_probs=31.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEE-EEec
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVI-ICSR  112 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~-~~~r  112 (173)
                      .++||+++|+| .|.+|..+++.|.+.|++|+ +.|.
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            47899999998 78899999999999999998 6776

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.89  E-value=0.02  Score=45.44  Aligned_cols=63  Identities=22%  Similarity=0.325  Sum_probs=45.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC-------------------hhhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+..++|.|+ ||+|..+++.|+..|. ++.++|.+                   ..+.+...+.+.+..+..++..+.
T Consensus        34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            55778999985 7999999999999994 88888642                   234566667777665555566655


Q ss_pred             eeCC
Q 030706          138 CDVS  141 (173)
Q Consensus       138 ~Dv~  141 (173)
                      .++.
T Consensus       113 ~~~~  116 (346)
T 1y8q_A          113 EDIE  116 (346)
T ss_dssp             SCGG
T ss_pred             cccC
Confidence            5543

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=95.88  E-value=0.028  Score=44.23  Aligned_cols=77  Identities=17%  Similarity=0.123  Sum_probs=45.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.|.+++|+|++|++|...+..+...| .+|+.++. .++.+..    . . +...+    .| .+.+ +.+.+.++  .
T Consensus       141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~-~~~~~~~----~-~-ga~~~----~~-~~~~-~~~~~~~~--~  205 (349)
T 4a27_A          141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS-TFKHEAI----K-D-SVTHL----FD-RNAD-YVQEVKRI--S  205 (349)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEEC-GGGHHHH----G-G-GSSEE----EE-TTSC-HHHHHHHH--C
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCC-HHHHHHH----H-c-CCcEE----Ec-CCcc-HHHHHHHh--c
Confidence            357899999999999998776555554 68888773 3333221    1 2 22122    24 3333 22223332  1


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      .+++|++|.++|.
T Consensus       206 ~~g~Dvv~d~~g~  218 (349)
T 4a27_A          206 AEGVDIVLDCLCG  218 (349)
T ss_dssp             TTCEEEEEEECC-
T ss_pred             CCCceEEEECCCc
Confidence            2479999999874

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.88  E-value=0.063  Score=42.05  Aligned_cols=76  Identities=16%  Similarity=0.161  Sum_probs=51.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHhCC-ceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+.|+|+ |.+|..++..|+..+.  .|++.|+++++++....++.....- ..+.+. .|  +.+           .+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~~-----------a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EYS-----------DC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CHH-----------Hh
Confidence            57899998 9999999999998874  8999999888777666666553210 122222 12  222           23


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      ..-|++|..+|+..
T Consensus        71 ~~aDvVii~ag~~~   84 (318)
T 1ez4_A           71 KDADLVVITAGAPQ   84 (318)
T ss_dssp             TTCSEEEECCCC--
T ss_pred             CCCCEEEECCCCCC
Confidence            46788888887653

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.87  E-value=0.082  Score=40.04  Aligned_cols=83  Identities=17%  Similarity=0.115  Sum_probs=51.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH---------HHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS---------LREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---------l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      ++.|.| .|.+|.++++.|.+.|++|++++|+++..+...+.         +.+. ....+.++.   .....+..++++
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~a---v~~~~~~~~~~~   76 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLC---TPIQLILPTLEK   76 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEEC---SCHHHHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEE---CCHHHHHHHHHH
Confidence            477888 68999999999999999999999988766553210         0000 111222221   234566777777


Q ss_pred             HHHhcCCccEEEEcccC
Q 030706          153 AQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~  169 (173)
                      +.....+=.+||+.+++
T Consensus        77 l~~~~~~~~~vv~~~~~   93 (279)
T 2f1k_A           77 LIPHLSPTAIVTDVASV   93 (279)
T ss_dssp             HGGGSCTTCEEEECCSC
T ss_pred             HHhhCCCCCEEEECCCC
Confidence            65544333456665443

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.77  E-value=0.029  Score=43.62  Aligned_cols=42  Identities=17%  Similarity=0.383  Sum_probs=34.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l  124 (173)
                      ++.|.|+ |.+|..++..|+..|.  +|++.|++++..+....++
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l   45 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDI   45 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhh
Confidence            5788898 9999999999999997  9999999987665444444

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.75  E-value=0.013  Score=44.48  Aligned_cols=40  Identities=23%  Similarity=0.450  Sum_probs=34.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~  119 (173)
                      +.+ +++|.|+ ||.|++++..|.+.|+ +|++++|+.++.++
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~  147 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA  147 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            467 7899986 8999999999999997 89999999876544

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.73  E-value=0.085  Score=41.46  Aligned_cols=76  Identities=14%  Similarity=0.132  Sum_probs=51.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHhCC-ceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .++.|+|+ |.+|..++..|+..+.  .|++.|+++++++....++.....- ..+.+.. |  +.++           +
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a-----------~   74 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD-----------A   74 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH-----------h
Confidence            57999998 9999999999998874  8999999888777666666543100 1222221 2  2221           2


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      ..-|++|..+|+..
T Consensus        75 ~~aDvVii~ag~~~   88 (326)
T 2zqz_A           75 KDADLVVITAGAPQ   88 (326)
T ss_dssp             GGCSEEEECCCCC-
T ss_pred             CCCCEEEEcCCCCC
Confidence            36788888888754

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.72  E-value=0.02  Score=44.32  Aligned_cols=43  Identities=21%  Similarity=0.324  Sum_probs=37.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      ..+.||+++|.|.++-+|+.++..|...|++|.++.+....++
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~  199 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA  199 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH
Confidence            3478999999999988999999999999999999987554443

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.69  E-value=0.051  Score=42.40  Aligned_cols=76  Identities=17%  Similarity=0.193  Sum_probs=51.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++.|+|+ |.+|..++..|+..+  .+|++.|+++++++....++.+... ...+.+.. |  +.++           +.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------LE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------hC
Confidence            5788998 999999999999887  5899999998777766666654311 01122221 2  2222           23


Q ss_pred             CccEEEEcccCCCC
Q 030706          159 YVDIWVFMSDLHSS  172 (173)
Q Consensus       159 ~id~lVn~AG~~~~  172 (173)
                      .-|++|..+|+...
T Consensus        67 ~aD~Vii~ag~~~~   80 (310)
T 2xxj_A           67 GARAVVLAAGVAQR   80 (310)
T ss_dssp             TEEEEEECCCCCCC
T ss_pred             CCCEEEECCCCCCC
Confidence            67889988887543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.69  E-value=0.042  Score=42.69  Aligned_cols=76  Identities=14%  Similarity=0.064  Sum_probs=51.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHh---CCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEF---GEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.|+|+ |+||..++..|+.++  .+++++|.+++..+-...+|....   +. .......  .|.++           
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~-~~~i~~~--~d~~~-----------   66 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK-YPKIVGG--ADYSL-----------   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTC-CCEEEEE--SCGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCC-CCeEecC--CCHHH-----------
Confidence            4677785 999999999999887  479999998877666666665521   11 1222211  12222           


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +..-|++|..||+..+
T Consensus        67 ~~~aDvVvitAG~prk   82 (294)
T 2x0j_A           67 LKGSEIIVVTAGLARK   82 (294)
T ss_dssp             GTTCSEEEECCCCCCC
T ss_pred             hCCCCEEEEecCCCCC
Confidence            2368999999998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	173
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	3e-20
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-20
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-19
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-19
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-19
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-19
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-19
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-19
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	7e-19
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	8e-19
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-18
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	5e-18
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-17
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-17
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-17
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-17
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-17
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	4e-17
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-17
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	5e-17
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	6e-17
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	6e-17
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	9e-17
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	9e-17
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-16
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-16
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-16
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-16
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-16
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	4e-16
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	5e-16
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	6e-16
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	9e-16
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-15
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-15
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-15
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-15
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	9e-15
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-14
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-14
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-14
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-14
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	8e-14
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	9e-14
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-13
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-13
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-13
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-13
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-12
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-11
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-11
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	3e-11
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-11
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-10
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	4e-10
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	5e-10
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-09
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-09
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-09
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-09
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-09
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	3e-09
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-09
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	4e-09
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	6e-09
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	8e-09
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-07
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-06
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	3e-06
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	5e-06
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-05
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-05
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-05
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	5e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	6e-04
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	6e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.001
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.002
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	0.002
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.002
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	0.002
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.003
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	0.004
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	0.004
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.004
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.004

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (203), Expect = 3e-20
 Identities = 23/82 (28%), Positives = 38/82 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+ +GIG A A+  L  G  V +   + E       +L E+F  Q     +CDV++
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 65

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             ++ D       +   +DI V
Sbjct: 66  QQQLRDTFRKVVDHFGRLDILV 87

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.3 bits (203), Expect = 3e-20
 Identities = 18/82 (21%), Positives = 40/82 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG++ GIG A+A+  ++ G  V+ C+R+   ++      +       +   +CD+S 
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 72

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             ++  + +  +     VDI +
Sbjct: 73  EEDILSMFSAIRSQHSGVDICI 94

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 80.4 bits (198), Expect = 2e-19
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVWGTKCDVS 141
            +ITGS+ GIG A A  F + G  V I  R AER++   Q +      EQ+V     DV+
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
                 ++++        +DI V
Sbjct: 68  TDAGQDEILSTTLGKFGKLDILV 90

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 80.4 bits (198), Expect = 2e-19
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVWGTKCDV 140
            V+ITGS+ GIG   A  F + G NV I  RS+ER++   Q + +    E+ V     DV
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 66

Query: 141 SEGNEVADLVAFAQKNLKYVDIWV 164
           +  +    ++    K    +D+ V
Sbjct: 67  TTEDGQDQIINSTLKQFGKIDVLV 90

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 80.2 bits (197), Expect = 2e-19
 Identities = 21/82 (25%), Positives = 37/82 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG   G+G A A      G  + +   S+E ++++  ++ E   +  V  T  DVS+
Sbjct: 7   VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 66

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V   V    +    +D + 
Sbjct: 67  EAQVEAYVTATTERFGRIDGFF 88

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 79.7 bits (196), Expect = 2e-19
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG ++G+G+ +A+   +AG +V++ SR+ E    A Q L E++G +     +CDVS 
Sbjct: 8   ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE-TMAFRCDVSN 66

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             EV  L+   ++    +D  V
Sbjct: 67  YEEVKKLLEAVKEKFGKLDTVV 88

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 80.1 bits (197), Expect = 3e-19
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVS 141
           V+ITGS+ GIG + A  F K G  V I  R+ +R++   Q + +     + +     DV+
Sbjct: 7   VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 66

Query: 142 EGNEVADLVAFAQKNLKYVDIWVFM 166
           E +   D++         +DI V  
Sbjct: 67  EASGQDDIINTTLAKFGKIDILVNN 91

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 79.0 bits (194), Expect = 5e-19
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 2/84 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E    G  CDV  
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE--ADGRTCDVRS 62

Query: 143 GNEVADLVAFAQKNLKYVDIWVFM 166
             E+  LVA   +    VD+ V  
Sbjct: 63  VPEIEALVAAVVERYGPVDVLVNN 86

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 78.7 bits (193), Expect = 7e-19
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+ +GIG A+A   +K G  V I   +     +    + +  G  H    K DVS+
Sbjct: 4   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG--HAVAVKVDVSD 61

Query: 143 GNEVADLVAFAQKNLKYVDIWVFM 166
            ++V   V  A+K L   D+ V  
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNN 85

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 78.6 bits (193), Expect = 8e-19
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            +++TG  +GIG A  +    AG NV +  RSA       + + +EFG +     +CDVS
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK-TKAYQCDVS 69

Query: 142 EGNEVADLVAFAQKNLKYVDIW 163
             + V   +     +L  +   
Sbjct: 70  NTDIVTKTIQQIDADLGPISGL 91

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.6 bits (193), Expect = 2e-18
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH---VWGTKCD 139
            ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   L+          V   +C+
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 74

Query: 140 VSEGNEVADLVAFAQKNLKYVDIWVFM 166
           +    EV +LV         ++  V  
Sbjct: 75  IRNEEEVNNLVKSTLDTFGKINFLVNN 101

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 5e-18
 Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 6/98 (6%)

Query: 74  REPMLPPY-----NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF 128
           ++ MLPP         ITG   G+G  +       G   +I SR  + + +  + +  + 
Sbjct: 14  QKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT 73

Query: 129 GEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFM 166
           G + V   +CDV + + V + V+   K   + +I +  
Sbjct: 74  GNK-VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINN 110

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 75.5 bits (185), Expect = 1e-17
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 5/84 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG   G+G AL   F+  G  V +  +SAER    +  L  + G+  V G   DV  
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSAER----LAELETDHGDN-VLGIVGDVRS 62

Query: 143 GNEVADLVAFAQKNLKYVDIWVFM 166
             +     +        +D  +  
Sbjct: 63  LEDQKQAASRCVARFGKIDTLIPN 86

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 75.1 bits (184), Expect = 2e-17
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG+  GIG  +A  F  AG +V++   +A+  +  V  +++  G+   +  +CD++ 
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AFACRCDITS 71

Query: 143 GNEVADLVAFAQKNLKYVDIW 163
             E++ L  FA   L  VDI 
Sbjct: 72  EQELSALADFAISKLGKVDIL 92

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 74.4 bits (182), Expect = 3e-17
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            +L+TG+  GIG A    F + G +++   R    +  AV +L  E           DVS
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE-----AIAVVADVS 61

Query: 142 EGNEVADLVAFAQKNLKYVDIWVFM 166
           +   V  + A A +    +      
Sbjct: 62  DPKAVEAVFAEALEEFGRLHGVAHF 86

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 74.3 bits (182), Expect = 3e-17
 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG ++GIGY + +E    G +V  CSR+ + ++  +   R +  +     + CD+S 
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEA--SVCDLSS 68

Query: 143 GNEVADLVAFAQKNLKY-VDIWV 164
            +E  +L+     +    ++I V
Sbjct: 69  RSERQELMNTVANHFHGKLNILV 91

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 74.4 bits (182), Expect = 3e-17
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+   IG A A    + G  + +   + E ++ A  S+RE+  E       CDV+ 
Sbjct: 8   CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE--ARSYVCDVTS 65

Query: 143 GNEVADLVAFAQKNLKYVDIWVFM 166
              V   V    ++   +D     
Sbjct: 66  EEAVIGTVDSVVRDFGKIDFLFNN 89

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.8 bits (181), Expect = 4e-17
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V++TG  +GIG  + + F+ +G  V+IC +      +  Q L             CDV++
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG------AVFILCDVTQ 62

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            ++V  LV+   +    +D  V
Sbjct: 63  EDDVKTLVSETIRRFGRLDCVV 84

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 74.1 bits (181), Expect = 4e-17
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVS 141
            ++TGST GIG  +A      G ++++     A  ++     L  + G + V     D+S
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK-VLYDGADLS 65

Query: 142 EGNEVADLVAFAQKNLKYVDIWVFMSDLH 170
           +G  V  LV  A + +  +DI V  + + 
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQ 94

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 73.5 bits (180), Expect = 5e-17
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            V+ITG  +G+G   A++ + AG  V++     E   +  + L +            DV+
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA-----ARYQHLDVT 61

Query: 142 EGNEVADLVAFAQKNLKYVDIWVFM 166
              +   +VA+A++    VD  V  
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNN 86

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 73.5 bits (180), Expect = 6e-17
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG   G+G  + K  L  G  V     +      A Q L  E GE+ +   + DVS 
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEA----AGQQLAAELGERSM-FVRHDVSS 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +   ++A  Q+ L  +++ V
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLV 85

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 73.5 bits (180), Expect = 6e-17
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            VL+TG TKGIG+A+ +EF   G  +  C+R+   ++  +   +++  +  V G+ CD S
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ--VTGSVCDAS 67

Query: 142 EGNEVADLVAFAQKNLK-YVDIWV 164
              E   L+          +DI +
Sbjct: 68  LRPEREKLMQTVSSMFGGKLDILI 91

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 73.2 bits (179), Expect = 9e-17
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG   GIG   AK F++ G  V+I   + +       ++        V    CDV++
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFV---HCDVTK 65

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V +LV         +DI  
Sbjct: 66  DEDVRNLVDTTIAKHGKLDIMF 87

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 72.9 bits (178), Expect = 9e-17
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 5/88 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            LITGS +GIG A A+ +++ G  V I   + E   +    +              DV++
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA-----ACAIALDVTD 62

Query: 143 GNEVADLVAFAQKNLKYVDIWVFMSDLH 170
              +   VA        +DI V  + L 
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNNAALF 90

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 1e-16
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VLITG+  GIG   A EF K    +++   +   ++      +    + H +    D S 
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF--VVDCSN 67

Query: 143 GNEVADLVAFAQKNLKYVDIWVFM 166
             ++       +  +  V I V  
Sbjct: 68  REDIYSSAKKVKAEIGDVSILVNN 91

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 72.6 bits (178), Expect = 1e-16
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG   GIG A+A+ F   G ++ I            ++     G + V   KCDVS+
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPAP---EAEAAIRNLGRR-VLTVKCDVSQ 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +V              DI V
Sbjct: 64  PGDVEAFGKQVISTFGRCDILV 85

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 72.1 bits (176), Expect = 2e-16
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG +KGIGYA+ +E    G  V  CSR+ + +D  ++  RE+       G+ CD+  
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE--GSVCDLLS 66

Query: 143 GNEVADLVAFAQKNLK-YVDIWV 164
             E   L+          ++I V
Sbjct: 67  RTERDKLMQTVAHVFDGKLNILV 89

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 72.0 bits (176), Expect = 2e-16
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            +ITG T GIG A+A +F++ G  V+I  R ++  + A +S+        +   + D S+
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSD 65

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
            +    L    +K    V   V
Sbjct: 66  EDGWTKLFDATEKAFGPVSTLV 87

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 71.6 bits (175), Expect = 3e-16
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+ +GIG  +AK   K+  +VI  SR+ +  DS V  ++    E    G   DVS+
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE--SSGYAGDVSK 70

Query: 143 GNEVADLVAFAQKNLKYVDIWVFMSDLH 170
             E+++++       K VDI V  + + 
Sbjct: 71  KEEISEVINKILTEHKNVDILVNNAGIT 98

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 71.2 bits (174), Expect = 4e-16
 Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 8/82 (9%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            ++T      G   A    +AG  V     S ++ D       E F E +    +     
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-----EAFAETYP---QLKPMS 54

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             E A+L+         VD+ V
Sbjct: 55  EQEPAELIEAVTSAYGQVDVLV 76

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 71.3 bits (174), Expect = 5e-16
 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L TG+ +GIG  +A E  + G +V++   S+ +    V +  ++ G Q V   + D+S+
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGV-AIQADISK 67

Query: 143 GNEVADLVAFAQKNLKYVDIWVFM 166
            +EV  L   A  +   +D  +  
Sbjct: 68  PSEVVALFDKAVSHFGGLDFVMSN 91

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 70.6 bits (173), Expect = 6e-16
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 8/83 (9%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            VL+TG  +GIG A+A+ F + G  V +C    E  + A     E  G       + D+ 
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-----EAIGGAFF---QVDLE 58

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +  E    V  A   L  VD+ V
Sbjct: 59  DERERVRFVEEAAYALGRVDVLV 81

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 70.5 bits (172), Expect = 9e-16
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVS 141
           V+ITGS+ G+G ++A  F      V++  RS E   +S ++ +++  GE      K DV+
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AIAVKGDVT 67

Query: 142 EGNEVADLVAFAQKNLKYVDIW 163
             ++V +LV  A K    +D+ 
Sbjct: 68  VESDVINLVQSAIKEFGKLDVM 89

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 69.7 bits (170), Expect = 1e-15
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            VLITG+  GIG A  + F K G  ++ C      +  A +++              DV+
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP-------VVMDVA 59

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   V    A A  +L  +D  V
Sbjct: 60  DPASVERGFAEALAHLGRLDGVV 82

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 69.7 bits (170), Expect = 1e-15
 Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 5/82 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L++G  +G+G +  +  +  G  V+      E   +    L +            DV++
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA-----ARYVHLDVTQ 63

Query: 143 GNEVADLVAFAQKNLKYVDIWV 164
             +    V  A      + + V
Sbjct: 64  PAQWKAAVDTAVTAFGGLHVLV 85

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 69.3 bits (169), Expect = 2e-15
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           NV+   +  GIG   ++E +K      +     E   +A+  L+    + ++     DV+
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVNITFHTYDVT 65

Query: 142 -EGNEVADLVAFAQKNLKYVDIWVFM 166
               E   L+      LK VDI +  
Sbjct: 66  VPVAESKKLLKKIFDQLKTVDILING 91

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 68.2 bits (166), Expect = 6e-15
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            L+TG+ +GIG  +A E  + G  VI+    S E  +  V ++++   +      K +V 
Sbjct: 21  ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD--AACVKANVG 78

Query: 142 EGNEVADLVAFAQKNLKYVDIWVFM 166
              ++  +   A K    +DI    
Sbjct: 79  VVEDIVRMFEEAVKIFGKLDIVCSN 103

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 67.5 bits (164), Expect = 9e-15
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 9/88 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDN-------VIICSRSAERVDSAVQSLREEFGEQHVWG 135
           +LITG+ KGIG A+A EF +A  +       +++ SR+A  ++      R E        
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI- 62

Query: 136 TKCDVSEGNEVADLVAFAQKNLKYVDIW 163
              D+S+  +V  L     +   ++D  
Sbjct: 63  -TADISDMADVRRLTTHIVERYGHIDCL 89

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 1e-14
 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            L+TG  KGIG A+ ++  +    +V++ +R   R  +AVQ L+ E         + D+ 
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH--QLDID 63

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           +   +  L  F +K    +D+ V
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLV 86

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.7 bits (162), Expect = 2e-14
 Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
            ++TG+++G G ALA +  +    G  +++ +RS   +    + L  +  +  V     D
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68

Query: 140 VSEGNEVADLVAFAQKNLK 158
           +     V  L++  ++  +
Sbjct: 69  LGTEAGVQRLLSAVRELPR 87

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 66.3 bits (161), Expect = 2e-14
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 13/85 (15%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           +VL+TG  +GIG A+A+     G  V +  R +                    G + DV+
Sbjct: 9   SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEVDVT 55

Query: 142 EGNEVADLVAFAQKNLKYVDIWVFM 166
           + + V       +++   V++ V  
Sbjct: 56  DSDAVDRAFTAVEEHQGPVEVLVSN 80

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 4e-14
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 67

Query: 134 WGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFM 166
           +     + +       VA A K +  +D+ +  
Sbjct: 68  Y-IAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 99

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (158), Expect = 8e-14
 Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 10/85 (11%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            VL+TG+ KGIG    +     G  V+  SR+   +DS V+          +     D+ 
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG------IEPVCVDLG 62

Query: 142 EGNEVADLVAFAQKNLKYVDIWVFM 166
           +       +     ++  VD+ V  
Sbjct: 63  DWEATERALG----SVGPVDLLVNN 83

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.6 bits (157), Expect = 9e-14
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 10/83 (12%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
             L+TG+ KGIG    K    +G  V+  +R+   + S  +          +     D+ 
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP------GIEPVCVDLG 60

Query: 142 EGNEVADLVAFAQKNLKYVDIWV 164
           + +     +      +  VD+ V
Sbjct: 61  DWDATEKALG----GIGPVDLLV 79

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 64.5 bits (156), Expect = 1e-13
 Identities = 15/87 (17%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWGTK 137
           P +V++TG+ +GIG  L ++ +K  +  ++I  +R  E+         +   +  V    
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-----KSIKDSRVHVLP 57

Query: 138 CDVSEGNEVADLVAFAQKNLKYVDIWV 164
             V+    +   V+   + +    + +
Sbjct: 58  LTVTCDKSLDTFVSKVGEIVGSDGLSL 84

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 64.5 bits (156), Expect = 1e-13
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHV---WGTKC 138
            +ITG  + IG+++A    + G  V++  R +E      V  L        V        
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63

Query: 139 DVSEGNEVADLVAFAQKNLKYVDIWV 164
             S  +   D++  + +     D+ V
Sbjct: 64  SSSLLDCCEDIIDCSFRAFGRCDVLV 89

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 64.7 bits (156), Expect = 1e-13
 Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 17/101 (16%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHV-------- 133
            L+TG+ K +G ++A+     G  V +   RSA   ++   +L        +        
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 134 --------WGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFM 166
                         V+     A+LVA    +    D+ V  
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNN 105

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 62.8 bits (152), Expect = 5e-13
 Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
           V++TG+++GIG A+A    KAG  V++  +RSA+  +   + +    G+   +    DVS
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF--GGDVS 61

Query: 142 EGNEVADLVAFAQKNLKYVDIWVFMSDLH 170
           +  +V  ++  A      +D+ V  + + 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGIT 90

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 61.2 bits (148), Expect = 1e-12
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 17/84 (20%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            VL+  +++GIG A+A    + G  V IC+R+ E +        +  G ++V    CD+ 
Sbjct: 6   GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL--------KRSGHRYV---VCDLR 54

Query: 142 EGNEVADLVAFAQKNLKYVDIWVF 165
                   +    + +K VDI V 
Sbjct: 55  ------KDLDLLFEKVKEVDILVL 72

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.8 bits (142), Expect = 2e-11
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----RVDSAVQSLREEFGEQHVWGTK 137
           VL+TG+  G+G A A  F + G  V++     +     +  SA   + EE   +      
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 138 CDVSEGNEVADLVAFAQKNLKYVDIWVF 165
              S       LV  A      +D+ V 
Sbjct: 70  NYDSV-EAGEKLVKTALDTFGRIDVVVN 96

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 58.2 bits (140), Expect = 2e-11
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG+++GIG A+A+     G  VI  + S        Q++ +  G     G   +V++
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTATSEN----GAQAISDYLGANG-KGLMLNVTD 61

Query: 143 GNEVADLVAFAQKNLKYVDIWVFM 166
              +  ++   +     VDI V  
Sbjct: 62  PASIESVLEKIRAEFGEVDILVNN 85

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 57.8 bits (138), Expect = 3e-11
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
             LI G  + K I Y +A+     G  +     + E ++  V+ + +E    +V+  + D
Sbjct: 7   KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNSPYVY--ELD 63

Query: 140 VSEGNEVADLVAFAQKNLKYVDIWVFM 166
           VS+      L    +K+L  +D  V  
Sbjct: 64  VSKEEHFKSLYNSVKKDLGSLDFIVHS 90

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 57.6 bits (138), Expect = 3e-11
 Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 14/85 (16%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            V++ G    +G A+ + F K G  V+    SA     +   +              + +
Sbjct: 4   KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILV------------DGNKN 51

Query: 142 EGNEVADLVAFAQKNLKY--VDIWV 164
              +   ++     +L+   VD   
Sbjct: 52  WTEQEQSILEQTASSLQGSQVDGVF 76

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 55.1 bits (131), Expect = 2e-10
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           V + G T  +G  LA      G  +++ SR  E+ ++     R   G+     T     +
Sbjct: 3   VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGD--ASITGMKNED 60

Query: 143 GNEVADLVAFAQKNLKYVDIWVFMSDLH 170
             E  D+          +D    + ++ 
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNIL 88

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 54.7 bits (130), Expect = 4e-10
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 6/88 (6%)

Query: 82  NVLITGSTKGIGYALAKEFL---KAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKC 138
           ++LITG  +G+G  L K  L   +   ++    R+ E+    ++ L +     ++   + 
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHS--NIHILEI 60

Query: 139 DVSEGNEVADLVAFAQKNLKYVDIWVFM 166
           D+   +    LVA  +   K   + V  
Sbjct: 61  DLRNFDAYDKLVADIEGVTKDQGLNVLF 88

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 5e-10
 Identities = 9/52 (17%), Positives = 19/52 (36%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
            +ITG   G+G A A+  +  G + ++        ++  + L          
Sbjct: 8   AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPAD 59

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 53.7 bits (128), Expect = 1e-09
 Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
             L+ G  + + +G+A+A +  +AG  V +  ++ ER+    + L E  G   ++  + D
Sbjct: 10  KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA-ERLRPEAEKLAEALGGALLF--RAD 66

Query: 140 VSEGNEVADLVAFAQKNLKYVDIWVFMSDLH 170
           V++  E+  L A  ++    +D  V      
Sbjct: 67  VTQDEELDALFAGVKEAFGGLDYLVHAIAFA 97

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 53.4 bits (127), Expect = 1e-09
 Identities = 17/83 (20%), Positives = 25/83 (30%), Gaps = 20/83 (24%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           ++I+G   GIG A  K    AG  ++        V                     D+S 
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-------------------IADLST 44

Query: 143 GNEVADLVA-FAQKNLKYVDIWV 164
                  +A    K  K +D  V
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLV 67

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 1e-09
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
           +++T + +GIG A A  F + G  VI    +       +Q L +  G Q        
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINES----KLQELEKYPGIQTRVLDVTK 61

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.9 bits (126), Expect = 2e-09
 Identities = 15/85 (17%), Positives = 22/85 (25%), Gaps = 14/85 (16%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            VL+ G    +G    + F      V           SA   +            K   S
Sbjct: 4   RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIV------------KMTDS 51

Query: 142 EGNEVADLVAFAQKNLKY--VDIWV 164
              +   + A   K L    VD  +
Sbjct: 52  FTEQADQVTAEVGKLLGDQKVDAIL 76

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 53.1 bits (126), Expect = 2e-09
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKC 138
           VL+TG T G+G  +A+   + G  ++++ SRS    D A   L  E        T  
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGA-GELVAELEALGARTTVA 67

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 52.5 bits (124), Expect = 3e-09
 Identities = 6/60 (10%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
            +L++G  +   I + +A+   + G  +++      R+   +               + +
Sbjct: 8   RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNE 67

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 52.4 bits (124), Expect = 3e-09
 Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 4/86 (4%)

Query: 83  VLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW--GTKC 138
             I G     G G+A+AK    AG  +++ +             R +F +  V   G+  
Sbjct: 11  AFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLM 70

Query: 139 DVSEGNEVADLVAFAQKNLKYVDIWV 164
           ++ +   +  +    +   + V    
Sbjct: 71  EIKKVYPLDAVFDNPEDVPEDVKANK 96

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 4e-09
 Identities = 16/65 (24%), Positives = 22/65 (33%), Gaps = 8/65 (12%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA------ERVDSAVQSLREEFGEQHVWGT 136
           VLITG + GIG  LA               +        R+  A ++L    G       
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL-- 62

Query: 137 KCDVS 141
           + DV 
Sbjct: 63  QLDVR 67

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 51.3 bits (122), Expect = 6e-09
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 14/84 (16%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
            L+TG   G+G A A      G  V++     E  D                  + DV+ 
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYV--------------EGDVTR 49

Query: 143 GNEVADLVAFAQKNLKYVDIWVFM 166
             +V   VA AQ+      +    
Sbjct: 50  EEDVRRAVARAQEEAPLFAVVSAA 73

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 51.1 bits (121), Expect = 8e-09
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
            +L+TG  S   I Y +A+   + G  +    ++ +++   V+    + G   V   +CD
Sbjct: 7   RILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVL--QCD 63

Query: 140 VSEGNEVADLVAFAQKNLKYVDIWV 164
           V+E   +  + A   K     D +V
Sbjct: 64  VAEDASIDTMFAELGKVWPKFDGFV 88

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 46.8 bits (109), Expect = 3e-07
 Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 2/85 (2%)

Query: 83  VLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV 140
             I G   T G G+ +AKE  K    +I                  +F    +      +
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 141 SEGNEVADLVAFAQKNLKYVDIWVF 165
           +  + +    +F   N    +    
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNN 89

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 44.4 bits (103), Expect = 2e-06
 Identities = 11/60 (18%), Positives = 28/60 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           VL+TG+   +   + ++ L+ G  V   +RSA ++ +  +    ++  +       D+ +
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK 73

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 44.0 bits (102), Expect = 3e-06
 Identities = 10/58 (17%), Positives = 18/58 (31%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV 140
           VLI G T  IG  +    +  G    +  R     +     +   F +      +  +
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 43.1 bits (100), Expect = 5e-06
 Identities = 10/87 (11%), Positives = 26/87 (29%), Gaps = 11/87 (12%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            + + G+T   G +L +     G +V     S + + +  + L+         G      
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAIPNVTLFQG------ 56

Query: 142 EGNEVADLVAFAQKNLKYVDIWVFMSD 168
               + + V       +   +    + 
Sbjct: 57  ---PLLNNVPLMDTLFEGAHLAFINTT 80

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 42.1 bits (97), Expect = 1e-05
 Identities = 17/58 (29%), Positives = 22/58 (37%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
            V +TG T   G  L+      G  V   S +A  V S  ++ R   G Q   G   D
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD 67

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (95), Expect = 2e-05
 Identities = 11/58 (18%), Positives = 20/58 (34%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD 139
            + I G+T   G     + ++AG  V +  R + R+ S             +     D
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVD 62

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 40.2 bits (92), Expect = 4e-05
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR-EEFGEQHVWGTKCDV 140
           +L+ G+T  IG  +AK  L  G    +  R +    ++ ++   E F           +
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 38.8 bits (89), Expect = 1e-04
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            VL+TG +  IG     + L+ G +VII         S +  + E  G +H    + D+ 
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI-ERLGGKHPTFVEGDIR 60

Query: 142 EGNEVADL 149
               + ++
Sbjct: 61  NEALMTEI 68

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.3 bits (87), Expect = 2e-04
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII--CSRSAERVDSAVQSLREEFGEQHVWGTKC 138
           VL+TG++   G  + K+  +  D  +     RSA+  +          G+     +  
Sbjct: 6   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSIN 63

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.4 bits (86), Expect = 4e-04
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            +LITG    IG A+ +  +K   + ++           ++SL +            D+ 
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTY-AGNLESLSDISESNRYNFEHADIC 60

Query: 142 EGNEVADLVAFAQ 154
           +  E+  +    Q
Sbjct: 61  DSAEITRIFEQYQ 73

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.2 bits (85), Expect = 5e-04
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 71  SVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            +++E    P   LITG    IG  L +  LK    V+     A      +  +R    E
Sbjct: 7   ELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSE 66

Query: 131 QH 132
           + 
Sbjct: 67  KQ 68

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.0 bits (84), Expect = 6e-04
 Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 6/90 (6%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSR-----SAERVDSAVQSLREEFGEQHVWGT 136
             LITG T   G  L +  L  G  V    R     + +R++  +        +  +   
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINH-IYIDPHNVNKALMKLH 61

Query: 137 KCDVSEGNEVADLVAFAQKNLKYVDIWVFM 166
             D+++ + +   +   + +  Y       
Sbjct: 62  YADLTDASSLRRWIDVIKPDEVYNLAAQSH 91

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 36.9 bits (83), Expect = 6e-04
 Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 6/68 (8%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141
            VLI G    IG  L +  L+     +        +D    ++       H    + D+S
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYG------LDIGSDAISRFLNHPHFHFVEGDIS 55

Query: 142 EGNEVADL 149
             +E  + 
Sbjct: 56  IHSEWIEY 63

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 36.3 bits (82), Expect = 0.001
 Identities = 8/32 (25%), Positives = 13/32 (40%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
            +LITG+   +G  + K+       VI     
Sbjct: 3   KILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.8 bits (81), Expect = 0.002
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR 112
            L+TG T   G  LAK  L+ G  V     
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVA 32

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 35.6 bits (81), Expect = 0.002
 Identities = 8/33 (24%), Positives = 15/33 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115
           V I G    +G A+ ++  + GD  ++     E
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE 37

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 35.3 bits (79), Expect = 0.002
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115
           N+L+ G T  +G+ L +     G+ + +   S E
Sbjct: 2   NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE 35

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 35.1 bits (79), Expect = 0.002
 Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 4/90 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE 142
           +LITG    +G  LA   L  G ++I+    + +   A  +L       +      D+  
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK--GATDNLHWLSSLGNFEFVHGDIRN 60

Query: 143 GNEVADLVAFAQKNLKYVDIWVFMSDLHSS 172
            N+V  L    +              + +S
Sbjct: 61  KNDVTRL--ITKYMPDSCFHLAGQVAMTTS 88

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 35.2 bits (80), Expect = 0.003
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR 112
            LITG T   G  LA+  L+ G  V    R
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKR 33

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.5 bits (78), Expect = 0.004
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
            + ITG+   I   +A+     G  VI     
Sbjct: 17  KISITGAGGFIASHIARRLKHEGHYVIASDWK 48

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 34.4 bits (77), Expect = 0.004
 Identities = 8/34 (23%), Positives = 13/34 (38%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
           P  VL+ G+T   G  L    L       + + +
Sbjct: 2   PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 35

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (78), Expect = 0.004
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           VL+TG    IG     E L+AG   ++
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVV 31

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.6 bits (77), Expect = 0.004
 Identities = 8/27 (29%), Positives = 11/27 (40%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           V++ G     G+A A    K    V I
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCI 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	173
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.9
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.9
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.9
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.89
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.89
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.89
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.89
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.89
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.89
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.88
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.88
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.88
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.88
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.88
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.88
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.88
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.88
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.88
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.87
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.87
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.87
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.87
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.87
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.87
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.87
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.87
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.87
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.86
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.86
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.86
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.86
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.85
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.85
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.85
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.85
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.84
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.84
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.83
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.83
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.83
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.83
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.82
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.82
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.82
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.82
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.81
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.8
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.79
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.79
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.75
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.75
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.74
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.72
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.71
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.7
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.68
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.67
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.66
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.65
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.65
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.64
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.64
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.55
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.55
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.52
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.44
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.33
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.31
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.31
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.3
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.29
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.27
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.25
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.24
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.23
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.16
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.16
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.12
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.09
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.02
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.01
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.96
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.92
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.89
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.89
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.81
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.81
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.78
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.78
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.78
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.77
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.67
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.61
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.51
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.46
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.35
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.34
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.26
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.23
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.2
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.1
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.1
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.09
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.08
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.03
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.99
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.91
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.9
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.88
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.87
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.84
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.77
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.77
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.7
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.69
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.68
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.63
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.56
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.49
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.42
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.4
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.37
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.37
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.36
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.3
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.28
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.24
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.23
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.22
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.19
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.17
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.13
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.11
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.11
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.09
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.07
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	97.07
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.06
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.05
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.02
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	97.01
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.99
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.93
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.91
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.88
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.88
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.86
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.85
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.8
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.76
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.74
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.72
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.7
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.68
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.53
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.51
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.47
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.45
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.44
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.36
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.31
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.28
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.25
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.15
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.12
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.08
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.02
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.99
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	95.97
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.89
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.76
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.74
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.69
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.68
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.65
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.63
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.38
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.34
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.22
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.2
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.17
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.11
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.09
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.84
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.82
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	94.81
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.68
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.68
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	94.67
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	94.65
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.63
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.62
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.54
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.54
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	94.53
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.51
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	94.38
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.31
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.26
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.22
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.19
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	94.09
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.04
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.98
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.91
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.87
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.83
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.8
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.77
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	93.72
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.61
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.52
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.49
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.41
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	93.35
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.32
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.31
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.31
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.28
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.25
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	93.12
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	93.09
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.06
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.05
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.04
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.01
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.97
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.9
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.88
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.84
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.76
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.68
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.63
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.32
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.29
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	92.28
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	92.22
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.22
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	92.17
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.12
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.11
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	92.0
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	91.89
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.83
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	91.66
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	91.65
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	91.61
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	91.61
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	91.4
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.29
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.24
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	91.23
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	91.2
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.16
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.08
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.86
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	90.83
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	90.79
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.78
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.52
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.38
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	90.28
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	90.25
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	90.25
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.12
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.98
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	89.77
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	89.3
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	89.24
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	89.1
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	89.03
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	88.56
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	88.1
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	87.93
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.64
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	87.46
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	87.46
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	87.41
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	87.36
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	87.28
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	87.2
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	87.16
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	86.92
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	86.81
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	86.64
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	86.57
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	86.4
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	86.01
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	85.95
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	85.89
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	85.87
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	85.51
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	85.46
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	85.32
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	85.26
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	85.01
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	84.94
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	84.88
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	84.55
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	84.55
d2h00a1	250	Methyltransferase 10 domain containing protein MET	84.51
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.47
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.05
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	83.79
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	83.63
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	83.54
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	83.37
d2eyqa5	211	Transcription-repair coupling factor, TRCF {Escher	83.34
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	83.28
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	83.28
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	83.16
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	82.64
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	82.46
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	82.42
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	82.35
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	82.33
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	82.31
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	82.3
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	82.18
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	82.05
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	82.01
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	81.97
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	81.91
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	81.54
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	81.53
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	81.47
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	81.41
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	81.27
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.21
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	81.18
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	81.14
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	80.71
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	80.62
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	80.55
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	80.52
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	80.5
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	80.47
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	80.32
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	80.21

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=2e-23  Score=158.97  Aligned_cols=96  Identities=28%  Similarity=0.465  Sum_probs=89.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.+.++. ++.++.+|++|+++++++++++.+
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999999999998888777665 688999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+...
T Consensus        80 ~~g~iDiLVnnAG~~~~   96 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRR   96 (251)
T ss_dssp             HHSCCCEEEECCCCCCC
T ss_pred             HcCCCCEEEECCCCCCC
Confidence            99999999999998653

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.90  E-value=1.8e-23  Score=159.87  Aligned_cols=95  Identities=22%  Similarity=0.302  Sum_probs=88.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ++||++|||||++|||+++++.|+++|++|++++|+.+.+++..+++....++.++.++++|++|+++++++++++.+++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            78999999999999999999999999999999999999999988888877665579999999999999999999999999


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      |+||+||||||+..+
T Consensus        82 G~iDiLVnnAG~~~~   96 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGK   96 (258)
T ss_dssp             SCCSEEEECCCCCCC
T ss_pred             CCCCEEEECCccccc
Confidence            999999999998653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.8e-23  Score=158.69  Aligned_cols=95  Identities=20%  Similarity=0.337  Sum_probs=89.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.+.+...++.+++||++++++++++++++.+++
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            88999999999999999999999999999999999999999999999887655589999999999999999999999999


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      |+||+||||||...+
T Consensus        88 g~iD~lVnnAg~~~~  102 (257)
T d1xg5a_          88 SGVDICINNAGLARP  102 (257)
T ss_dssp             CCCSEEEECCCCCCC
T ss_pred             CCCCEEEecccccCC
Confidence            999999999998754

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.89  E-value=3.4e-23  Score=158.35  Aligned_cols=95  Identities=25%  Similarity=0.402  Sum_probs=86.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ||+||++|||||++|||+++|+.|+++|++|++++|+. +.+++..+++...++. ++.++.+|++|+++++++++++.+
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999974 5677777777766664 799999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+..+
T Consensus        80 ~~G~iDiLVnnAG~~~~   96 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQHT   96 (260)
T ss_dssp             HHSCCSEEEECCCCCCC
T ss_pred             HhCCCcEEEeecccccC
Confidence            99999999999998754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.89  E-value=3.8e-23  Score=158.12  Aligned_cols=96  Identities=23%  Similarity=0.352  Sum_probs=88.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.+..+. ++.++++|++|+++++++++++.+
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV-KTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC-ceEEEEccCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999999998888888776665 689999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+..+
T Consensus        84 ~~g~iDilVnnAg~~~~  100 (260)
T d1h5qa_          84 DLGPISGLIANAGVSVV  100 (260)
T ss_dssp             HSCSEEEEEECCCCCCC
T ss_pred             HhCCCcEeccccccccc
Confidence            99999999999998754

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=4.6e-23  Score=157.32  Aligned_cols=95  Identities=27%  Similarity=0.425  Sum_probs=88.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.+.++  ++.++++|++|+++++++++++.+
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~--~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG--QAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC--cEEEEEccCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999999999999999999999999999987644  588999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+..+
T Consensus        85 ~~g~iDilvnnAG~~~~  101 (255)
T d1fmca_          85 KLGKVDILVNNAGGGGP  101 (255)
T ss_dssp             HHSSCCEEEECCCCCCC
T ss_pred             HcCCCCEeeeCCcCCCC
Confidence            99999999999998764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.89  E-value=9.7e-23  Score=155.56  Aligned_cols=92  Identities=30%  Similarity=0.425  Sum_probs=85.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.+.+.  ++.++++|++|+++++++++++.++||
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~--~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV--EADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999999999999999999876543  589999999999999999999999999


Q ss_pred             CccEEEEcccCCCC
Q 030706          159 YVDIWVFMSDLHSS  172 (173)
Q Consensus       159 ~id~lVn~AG~~~~  172 (173)
                      +||+||||||+...
T Consensus        79 ~iDilVnnAG~~~~   92 (257)
T d2rhca1          79 PVDVLVNNAGRPGG   92 (257)
T ss_dssp             SCSEEEECCCCCCC
T ss_pred             CCCEEEecccccCC
Confidence            99999999998754

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.6e-22  Score=153.35  Aligned_cols=95  Identities=19%  Similarity=0.187  Sum_probs=88.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..+.||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++...++  ++.++.||++|+++++++++++.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~--~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA--KVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHH
Confidence            348999999999999999999999999999999999999999999999876543  699999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|++|+||||||+...
T Consensus        81 ~~g~idilinnag~~~~   97 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYT   97 (244)
T ss_dssp             HTCCCSEEEECCCCCCC
T ss_pred             HcCCCceeEeecccccc
Confidence            99999999999998764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.7e-23  Score=155.92  Aligned_cols=94  Identities=24%  Similarity=0.354  Sum_probs=87.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      +||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.+..+..++.++.+|++|+++++++++++.+++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            69999999999999999999999999999999999999999888887765555799999999999999999999999999


Q ss_pred             CccEEEEcccCCCC
Q 030706          159 YVDIWVFMSDLHSS  172 (173)
Q Consensus       159 ~id~lVn~AG~~~~  172 (173)
                      +||+||||||+..+
T Consensus        82 ~iDilVnnAg~~~~   95 (254)
T d2gdza1          82 RLDILVNNAGVNNE   95 (254)
T ss_dssp             CCCEEEECCCCCCS
T ss_pred             CcCeeccccccccc
Confidence            99999999998754

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.88  E-value=1.7e-22  Score=153.75  Aligned_cols=96  Identities=27%  Similarity=0.278  Sum_probs=88.5

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+.+++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++...+.  ++.++.+|++|+++++++++++.
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY--ESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999999999998876543  58999999999999999999999


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                      +++|+||+||||||+...
T Consensus        83 ~~~g~iDilvnnag~~~~  100 (251)
T d2c07a1          83 TEHKNVDILVNNAGITRD  100 (251)
T ss_dssp             HHCSCCCEEEECCCCCCC
T ss_pred             HhcCCceeeeeccccccc
Confidence            999999999999998754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.88  E-value=1.1e-22  Score=156.48  Aligned_cols=96  Identities=27%  Similarity=0.352  Sum_probs=88.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh-CCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.+.. ...++.++.+|++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3889999999999999999999999999999999999999999999887753 234699999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+..+
T Consensus        82 ~~g~iDilvnnAG~~~~   98 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIP   98 (272)
T ss_dssp             HHSCCCEEEECCCCCCC
T ss_pred             HhCCceEEEeCCcccCc
Confidence            99999999999998754

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.88  E-value=1.9e-22  Score=154.18  Aligned_cols=93  Identities=20%  Similarity=0.261  Sum_probs=86.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++||++|||||++|||+++++.|+++|++|++++|+++.+++..+++...+.  ++.++.+|++|+++++++++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV--EARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999888876543  5889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|+||+||||||+..
T Consensus        80 ~g~iDilVnnaG~~~   94 (260)
T d1zema1          80 FGKIDFLFNNAGYQG   94 (260)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             hCCCCeehhhhcccc
Confidence            999999999999864

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.88  E-value=3.3e-22  Score=152.86  Aligned_cols=96  Identities=24%  Similarity=0.399  Sum_probs=87.6

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ++.|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++...+.  ++.++.+|++|+++++++++++.
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF--KVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CceEEEeeCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999999999988876533  68889999999999999999999


Q ss_pred             HhcC-CccEEEEcccCCCC
Q 030706          155 KNLK-YVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g-~id~lVn~AG~~~~  172 (173)
                      ++++ ++|+||||||+...
T Consensus        81 ~~~~~~idilvnnAG~~~~   99 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVIY   99 (259)
T ss_dssp             HHTTTCCCEEEECCCCCCC
T ss_pred             HHhCCCceEEEECCceecc
Confidence            9986 79999999998754

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.88  E-value=3.4e-22  Score=152.42  Aligned_cols=90  Identities=29%  Similarity=0.360  Sum_probs=84.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.+.++  ++.++.+|++|+++++++++++.++||+|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG--HAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            7899999999999999999999999999999999999999999877544  58899999999999999999999999999


Q ss_pred             cEEEEcccCCCC
Q 030706          161 DIWVFMSDLHSS  172 (173)
Q Consensus       161 d~lVn~AG~~~~  172 (173)
                      |+||||||+...
T Consensus        80 DilVnnAG~~~~   91 (255)
T d1gega_          80 DVIVNNAGVAPS   91 (255)
T ss_dssp             CEEEECCCCCCC
T ss_pred             cEEEeccccccc
Confidence            999999998754

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=2.7e-22  Score=153.38  Aligned_cols=97  Identities=27%  Similarity=0.340  Sum_probs=87.1

Q ss_pred             CCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        74 ~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +++.|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.....  ++.++.+|++++++++++++++
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGSVCDASLRPEREKLMQTV   79 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEeccCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999988876544  5899999999999999999999


Q ss_pred             HHhc-CCccEEEEcccCCCC
Q 030706          154 QKNL-KYVDIWVFMSDLHSS  172 (173)
Q Consensus       154 ~~~~-g~id~lVn~AG~~~~  172 (173)
                      .+++ |+||+||||||+..+
T Consensus        80 ~~~~~g~idilvnnAG~~~~   99 (259)
T d1xq1a_          80 SSMFGGKLDILINNLGAIRS   99 (259)
T ss_dssp             HHHHTTCCSEEEEECCC---
T ss_pred             HHHhCCCcccccccccccCC
Confidence            9998 789999999998754

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=1.8e-22  Score=152.86  Aligned_cols=89  Identities=26%  Similarity=0.309  Sum_probs=80.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++       +..++.+|++|+++++++++++.++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALAH   74 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999988777665443       3567899999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|+||+||||||+..+
T Consensus        75 ~g~iDilVnnAG~~~~   90 (242)
T d1ulsa_          75 LGRLDGVVHYAGITRD   90 (242)
T ss_dssp             HSSCCEEEECCCCCCC
T ss_pred             cCCceEEEECCccccc
Confidence            9999999999998764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.6e-22  Score=154.34  Aligned_cols=99  Identities=28%  Similarity=0.430  Sum_probs=89.4

Q ss_pred             CCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC---CceEEEEEeeCCCHHHHHHHH
Q 030706           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG---EQHVWGTKCDVSEGNEVADLV  150 (173)
Q Consensus        74 ~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~v~~~~  150 (173)
                      .+.+|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.....   +.++.++.+|++|++++++++
T Consensus         6 ~~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   85 (297)
T d1yxma1           6 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   85 (297)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence            34569999999999999999999999999999999999999999999888876432   247999999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccCCCC
Q 030706          151 AFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       151 ~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      +++.+.+|+||+||||||+...
T Consensus        86 ~~~~~~~G~iDiLVnnAg~~~~  107 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGGQFL  107 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHHhCCeEEEEeecccccc
Confidence            9999999999999999998653

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.88  E-value=2.2e-22  Score=154.18  Aligned_cols=94  Identities=28%  Similarity=0.322  Sum_probs=85.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..... ..++.++.+|++|+++++++++++.++
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999999999999999999887642 346999999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|+||+||||||+..
T Consensus        83 ~g~iDilvnnAG~~~   97 (264)
T d1spxa_          83 FGKLDILVNNAGAAI   97 (264)
T ss_dssp             HSCCCEEEECCC---
T ss_pred             hCCCCEeeccccccc
Confidence            999999999999864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.87  E-value=1.1e-21  Score=152.08  Aligned_cols=101  Identities=18%  Similarity=0.248  Sum_probs=92.2

Q ss_pred             CCCCCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHH
Q 030706           71 SVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLV  150 (173)
Q Consensus        71 ~~~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~  150 (173)
                      +..+.+.++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++....+. ++.++.+|+++++++++++
T Consensus        16 ~~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~-~~~~~~~D~~~~~~v~~~~   94 (294)
T d1w6ua_          16 AMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRDPDMVQNTV   94 (294)
T ss_dssp             CCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCC-ceEEEEecccChHHHHHHh
Confidence            344556799999999999999999999999999999999999999999999888877665 6889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccCCCC
Q 030706          151 AFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       151 ~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      +.+.+.+|++|+||||||+...
T Consensus        95 ~~~~~~~g~iDilvnnAg~~~~  116 (294)
T d1w6ua_          95 SELIKVAGHPNIVINNAAGNFI  116 (294)
T ss_dssp             HHHHHHTCSCSEEEECCCCCCC
T ss_pred             hhhhhhccccchhhhhhhhccc
Confidence            9999999999999999998654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.87  E-value=3e-22  Score=152.84  Aligned_cols=91  Identities=26%  Similarity=0.353  Sum_probs=83.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++    +. ++.++.+|++|+++++++++++.++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~-~~~~~~~Dvt~~~~v~~~~~~~~~~   76 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----GP-AACAIALDVTDQASIDRCVAELLDR   76 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CC-ceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            488999999999999999999999999999999999988887776665    32 5889999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|+||+||||||+...
T Consensus        77 ~g~iDilVnnAg~~~~   92 (256)
T d1k2wa_          77 WGSIDILVNNAALFDL   92 (256)
T ss_dssp             HSCCCEEEECCCCCCC
T ss_pred             hCCccEEEeecccccc
Confidence            9999999999998753

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.87  E-value=2.8e-22  Score=152.54  Aligned_cols=93  Identities=25%  Similarity=0.317  Sum_probs=84.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..  + .++.++.+|++|+++++++++++.++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--P-DQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--T-TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--C-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            38899999999999999999999999999999999999888887777643  2 36889999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|+||+||||||+..+
T Consensus        80 ~G~iDiLVnnAg~~~~   95 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAVN   95 (251)
T ss_dssp             HSSCCEEEECCCCCCC
T ss_pred             hCCceEEEeccccccc
Confidence            9999999999998754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.87  E-value=6.5e-22  Score=152.28  Aligned_cols=94  Identities=26%  Similarity=0.356  Sum_probs=87.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.+... ..++.++.+|++|+++++++++++.++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999999999999999999887643 246899999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ||+||+||||||+..
T Consensus        82 ~G~iDilVnnAG~~~   96 (274)
T d1xhla_          82 FGKIDILVNNAGANL   96 (274)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCceEEEeeccccc
Confidence            999999999999753

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.87  E-value=6.3e-22  Score=151.88  Aligned_cols=92  Identities=24%  Similarity=0.319  Sum_probs=84.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++...   ..+.++.+|++|+++++++++++.++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC---CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999988888877542   24778899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|+||+||||||+..
T Consensus        80 ~g~iD~lVnnAG~~~   94 (268)
T d2bgka1          80 HGKLDIMFGNVGVLS   94 (268)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCcceecccccccc
Confidence            999999999999864

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.87  E-value=8.3e-22  Score=150.75  Aligned_cols=94  Identities=28%  Similarity=0.385  Sum_probs=84.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.+ .+++..+++.+...  ++.++++|++|+++++++++++.+
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG--EAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHH
Confidence            389999999999999999999999999999999999854 56667777765433  689999999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+..+
T Consensus        82 ~~G~iDiLVnnAG~~~~   98 (261)
T d1geea_          82 EFGKLDVMINNAGLENP   98 (261)
T ss_dssp             HHSCCCEEEECCCCCCC
T ss_pred             HhCCCCEeeccceecCC
Confidence            99999999999998764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.87  E-value=7.6e-22  Score=149.61  Aligned_cols=91  Identities=15%  Similarity=0.186  Sum_probs=83.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.     .++.++.+|++|+++++++++++.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----CcceEEEeecCCHHHHHHHHHHHHHH
Confidence            4889999999999999999999999999999999999988877766653     25888999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|++|+||||||+...
T Consensus        78 ~g~idilinnAG~~~~   93 (244)
T d1nffa_          78 FGGLHVLVNNAGILNI   93 (244)
T ss_dssp             HSCCCEEEECCCCCCC
T ss_pred             hCCCeEEEECCcccCC
Confidence            9999999999998754

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.87  E-value=6.7e-22  Score=150.73  Aligned_cols=91  Identities=24%  Similarity=0.345  Sum_probs=82.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++    + .++.++++|++|+++++++++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----G-DAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----G-GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----C-CceEEEEcccCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999988877666554    2 26889999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|+||+||||||+..+
T Consensus        77 ~g~iDilVnnAg~~~~   92 (254)
T d1hdca_          77 FGSVDGLVNNAGISTG   92 (254)
T ss_dssp             HSCCCEEEECCCCCCC
T ss_pred             cCCccEEEecCccccc
Confidence            9999999999998754

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=1e-21  Score=148.80  Aligned_cols=90  Identities=21%  Similarity=0.286  Sum_probs=82.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ++||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.     .++.++.+|++|+++++++++++.+++
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-----ANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-----CCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            789999999999999999999999999999999999988887776663     257888999999999999999999999


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      |+||+||||||+...
T Consensus        77 g~iDilVnnAg~~~~   91 (243)
T d1q7ba_          77 GEVDILVNNAGITRD   91 (243)
T ss_dssp             CSCSEEEECCCCCCC
T ss_pred             CCcceehhhhhhccc
Confidence            999999999998754

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.2e-21  Score=149.09  Aligned_cols=89  Identities=25%  Similarity=0.395  Sum_probs=80.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++    +  ++.++.+|++|+++++++++++.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~--~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----P--GAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----T--TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----C--CCeEEEccCCCHHHHHHHHHHHHHh
Confidence            488999999999999999999999999999999999988776655443    3  4788999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|+||+||||||+..
T Consensus        77 ~g~iDilVnnAG~~~   91 (250)
T d1ydea1          77 FGRLDCVVNNAGHHP   91 (250)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEecccccc
Confidence            999999999999764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.86  E-value=1.9e-21  Score=147.65  Aligned_cols=92  Identities=27%  Similarity=0.367  Sum_probs=79.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .|+||++|||||++|||+++|+.|+++|++|++++|++..  +..+.++.. +. ++.++.+|++|+++++++++++.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~-g~-~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL-GR-RVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHc-CC-cEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            3889999999999999999999999999999999997643  222333333 33 6899999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|+||+||||||+...
T Consensus        78 ~G~iDilVnnAG~~~~   93 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPL   93 (247)
T ss_dssp             HSCCCEEEECCCCCCC
T ss_pred             cCCCCEEEECCCCCCC
Confidence            9999999999998754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.7e-22  Score=151.75  Aligned_cols=90  Identities=24%  Similarity=0.340  Sum_probs=83.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +++|||||++|||+++|+.|+++ |++|++++|+.+++++..+++...++  ++.++.+|++|.++++++++++.+++|+
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL--SPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            46799999999999999999986 89999999999999999999987654  4788999999999999999999999999


Q ss_pred             ccEEEEcccCCCC
Q 030706          160 VDIWVFMSDLHSS  172 (173)
Q Consensus       160 id~lVn~AG~~~~  172 (173)
                      ||+||||||+..+
T Consensus        82 iDiLVnNAGi~~~   94 (275)
T d1wmaa1          82 LDVLVNNAGIAFK   94 (275)
T ss_dssp             EEEEEECCCCCCC
T ss_pred             cEEEEEcCCcCCC
Confidence            9999999999764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.86  E-value=4.6e-21  Score=146.36  Aligned_cols=95  Identities=28%  Similarity=0.406  Sum_probs=87.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.++||++|||||++|||+++++.|+++|++|++++|+++.+++..+++.....  ++.++.+|++++++++++++++.+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~--~~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL--NVEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CceEEEeecCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999999999999998888876544  588889999999999999999999


Q ss_pred             hc-CCccEEEEcccCCCC
Q 030706          156 NL-KYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~-g~id~lVn~AG~~~~  172 (173)
                      ++ |.+|+||||||+...
T Consensus        80 ~~~g~idilinnag~~~~   97 (258)
T d1ae1a_          80 VFDGKLNILVNNAGVVIH   97 (258)
T ss_dssp             HTTSCCCEEEECCCCCCC
T ss_pred             HhCCCcEEEecccccccc
Confidence            98 689999999998764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.85  E-value=3.5e-21  Score=148.28  Aligned_cols=90  Identities=26%  Similarity=0.361  Sum_probs=81.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++    +. ++.++.+|++++++++++++++.++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~----~~-~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----GD-NVLGIVGDVRSLEDQKQAASRCVAR   76 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GG-GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CC-CeeEEecccccHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988776655543    32 6889999999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      +|++|+||||||+..
T Consensus        77 ~g~idilvnnAG~~~   91 (276)
T d1bdba_          77 FGKIDTLIPNAGIWD   91 (276)
T ss_dssp             HSCCCEEECCCCCCC
T ss_pred             hCCcccccccccccC
Confidence            999999999999864

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.85  E-value=2.7e-21  Score=147.21  Aligned_cols=91  Identities=22%  Similarity=0.270  Sum_probs=83.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .|+||++|||||++|||+++++.|+++|++|++++|+++.+++..+++    +. +..++.+|++|+++++++++++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GE-RSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CT-TEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CC-CeEEEEeecCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999998887776665    32 5788999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|++|+||||||+..+
T Consensus        78 ~g~iDilVnnAG~~~~   93 (253)
T d1hxha_          78 LGTLNVLVNNAGILLP   93 (253)
T ss_dssp             HCSCCEEEECCCCCCC
T ss_pred             hCCCCeEEecccccCC
Confidence            9999999999998754

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=3.7e-21  Score=146.11  Aligned_cols=88  Identities=26%  Similarity=0.401  Sum_probs=76.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++||++|||||++|||+++++.|+++|++|++++|+++..+ ..+++    +   ..++++|++|+++++++++++.++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~----~---~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI----G---GAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH----T---CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc----C---CeEEEEeCCCHHHHHHHHHHHHHh
Confidence            489999999999999999999999999999999999876532 22222    2   356799999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|+||+||||||+..+
T Consensus        74 ~G~iDiLVnnAG~~~~   89 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAAP   89 (248)
T ss_dssp             HSCCCEEEECCCCCCC
T ss_pred             cCCCCeEEEeCcCCCC
Confidence            9999999999998754

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.85  E-value=4.8e-21  Score=144.86  Aligned_cols=91  Identities=23%  Similarity=0.314  Sum_probs=81.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++    +. ++.++++|++++++++++++++.++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EA-EAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----CS-SEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CC-ceEEEEecCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999987766554433    33 6889999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|++|+||||||...+
T Consensus        77 ~g~iDiLinnAg~~~~   92 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAHS   92 (241)
T ss_dssp             HSCCCEEEEGGGGTTT
T ss_pred             hCCccEeccccccccc
Confidence            9999999999998654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.84  E-value=1.4e-20  Score=143.60  Aligned_cols=93  Identities=24%  Similarity=0.273  Sum_probs=82.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      |.||++|||||++|||+++++.|+++|++|+++++ +.+..++..+++.+.++  ++.++.+|++|+++++++++++.++
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~--~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA--QGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCC--CceEecCCCCCHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999998765 55556777777766544  5889999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|+||+||||||+...
T Consensus        82 ~g~idilinnag~~~~   97 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVW   97 (259)
T ss_dssp             HSCEEEEECCCCCCCC
T ss_pred             cCCCcEEEeccccccc
Confidence            9999999999998754

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.84  E-value=1.8e-20  Score=142.75  Aligned_cols=95  Identities=20%  Similarity=0.200  Sum_probs=82.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC-CHHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS-EGNEVADLVAFAQK  155 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~  155 (173)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+..+. .+++....+..++.++.+|++ +.++++++++++.+
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-LAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-HHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHH-HHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            4889999999999999999999999999999999887766544 345555555568999999998 67789999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+...
T Consensus        81 ~~g~iDilvnnAG~~~~   97 (254)
T d1sbya1          81 QLKTVDILINGAGILDD   97 (254)
T ss_dssp             HHSCCCEEEECCCCCCT
T ss_pred             HcCCCCEEEeCCCCCCH
Confidence            99999999999998643

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.83  E-value=1.2e-20  Score=142.59  Aligned_cols=90  Identities=27%  Similarity=0.315  Sum_probs=82.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCE-------EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDN-------VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~-------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +++|||||++|||+++|+.|+++|++       |++++|+.+.+++..+++...+.  ++.++.+|++|+++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~--~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA--LTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC--EEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999987       89999999999999888876533  6889999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCCC
Q 030706          154 QKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~~  172 (173)
                      .+++|+||+||||||+...
T Consensus        80 ~~~~g~iDilvnnAg~~~~   98 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRF   98 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCC
T ss_pred             HHHcCCcceeecccccccC
Confidence            9999999999999998754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.83  E-value=3.4e-20  Score=142.30  Aligned_cols=95  Identities=23%  Similarity=0.257  Sum_probs=84.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..|+||++|||||++|||+++++.|+++|++|++++++ .+.+++..+++.+.+.  ++.++.+|++|+++++++++++.
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~--~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS--DAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCC--ceeeEeCCCCCHHHHHHHHHHHH
Confidence            34899999999999999999999999999999999886 4556777777766544  58999999999999999999999


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                      +.+|+||++|||+|....
T Consensus        92 ~~~g~idilV~nag~~~~  109 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSF  109 (272)
T ss_dssp             HHHSCCCEEEECCCCCCC
T ss_pred             HHhCCCCccccccccchh
Confidence            999999999999998754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.83  E-value=3.9e-20  Score=140.04  Aligned_cols=90  Identities=26%  Similarity=0.334  Sum_probs=80.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +++|||||++|||+++|+.|+++|++|++++ |+++.+++..+++... +. ++.++++|++|+++++++++++.+++|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GG-QAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TC-EEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CC-cEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999876 5666777777777665 33 6899999999999999999999999999


Q ss_pred             ccEEEEcccCCCC
Q 030706          160 VDIWVFMSDLHSS  172 (173)
Q Consensus       160 id~lVn~AG~~~~  172 (173)
                      ||+||||||+...
T Consensus        80 iDiLVnnAg~~~~   92 (244)
T d1edoa_          80 IDVVVNNAGITRD   92 (244)
T ss_dssp             CSEEEECCCCCCC
T ss_pred             CCccccccccccc
Confidence            9999999998764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.83  E-value=7.4e-21  Score=143.52  Aligned_cols=84  Identities=24%  Similarity=0.437  Sum_probs=75.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.++||++|||||++|||+++++.|+++|++|++++|+.+..+             ++..+++|++|+++++++++++.+
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~v~~~~~~~~~   69 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEE   69 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-------------CceEEEEecCCHHHHHHHHHHHHH
Confidence            3489999999999999999999999999999999999875421             467789999999999999999999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+..+
T Consensus        70 ~~g~iDiLVnnAG~~~~   86 (237)
T d1uzma1          70 HQGPVEVLVSNAGLSAD   86 (237)
T ss_dssp             HHSSCSEEEEECSCCC-
T ss_pred             hcCCceEEEeeeccccc
Confidence            99999999999998754

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.5e-20  Score=141.13  Aligned_cols=87  Identities=23%  Similarity=0.280  Sum_probs=75.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++    +  .+.++.+|++|++++++++    +
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~----~--~~~~~~~Dv~d~~~v~~~~----~   72 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----P--GIEPVCVDLGDWEATERAL----G   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----C--CCeEEEEeCCCHHHHHHHH----H
Confidence            4589999999999999999999999999999999999988877666544    2  3677899999999987765    5


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+...
T Consensus        73 ~~g~iDilVnnAg~~~~   89 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVALL   89 (244)
T ss_dssp             TCCCCCEEEECCCCCCC
T ss_pred             HhCCceEEEeccccccc
Confidence            67999999999998754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=4.9e-20  Score=140.39  Aligned_cols=94  Identities=17%  Similarity=0.197  Sum_probs=85.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH---cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~---~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      |+||++|||||++|||+++|+.|++   +|++|++++|+.+.+++..+++...+++.++.++.+|++|+++++++++.+.
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            8899999999999999999999986   7999999999999999999999887666689999999999999999999887


Q ss_pred             Hh----cCCccEEEEcccCCC
Q 030706          155 KN----LKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~----~g~id~lVn~AG~~~  171 (173)
                      +.    ++.+|+||||||+..
T Consensus        84 ~~~~~~~~~~~~lvnnag~~~  104 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAATLG  104 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCC
T ss_pred             HhhhhccCceEEEEecccccc
Confidence            63    467899999999864

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=3e-20  Score=140.56  Aligned_cols=86  Identities=20%  Similarity=0.245  Sum_probs=73.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++||++|||||++|||+++++.|+++|++|++++|+++.+++..+++    .  .+.++.+|++|++++++++    ++
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~--~~~~~~~Dv~~~~~v~~~~----~~   71 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----P--GIEPVCVDLGDWDATEKAL----GG   71 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHH----TT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----C--CCeEEEEeCCCHHHHHHHH----HH
Confidence            478999999999999999999999999999999999988776655543    3  3677899999999887665    56


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +|+||+||||||+..+
T Consensus        72 ~g~iDilVnnAg~~~~   87 (242)
T d1cyda_          72 IGPVDLLVNNAALVIM   87 (242)
T ss_dssp             CCCCSEEEECCCCCCC
T ss_pred             cCCCeEEEECCccccc
Confidence            7999999999998754

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.82  E-value=7.3e-20  Score=139.16  Aligned_cols=92  Identities=22%  Similarity=0.317  Sum_probs=78.8

Q ss_pred             CCCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++..++ .+++....+  +..++++|++|+++++++++++.
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   81 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEALG--GALLFRADVTQDEELDALFAGVK   81 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTT--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhccC--cccccccccCCHHHHHHHHHHHH
Confidence            48999999999986  99999999999999999999998755444 344444434  36778999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +++|+||+||||||+..
T Consensus        82 ~~~g~iDilVnnag~~~   98 (256)
T d1ulua_          82 EAFGGLDYLVHAIAFAP   98 (256)
T ss_dssp             HHHSSEEEEEECCCCCC
T ss_pred             HhcCCceEEEecccccc
Confidence            99999999999999864

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.5e-19  Score=138.52  Aligned_cols=98  Identities=26%  Similarity=0.300  Sum_probs=89.4

Q ss_pred             CCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        74 ~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ...+++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++....+. .+..+.+|+++.+.++.+++++
T Consensus         8 ~~~~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~   86 (269)
T d1xu9a_           8 RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA-SAHYIAGTMEDMTFAEQFVAQA   86 (269)
T ss_dssp             CGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCS-EEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcc-cchhhhhhhhhHHHHHHHHHHH
Confidence            334599999999999999999999999999999999999999999998888776555 7888999999999999999999


Q ss_pred             HHhcCCccEEEEcccCCCC
Q 030706          154 QKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~~  172 (173)
                      .+.+|.+|++|||||+...
T Consensus        87 ~~~~g~~~~li~nag~~~~  105 (269)
T d1xu9a_          87 GKLMGGLDMLILNHITNTS  105 (269)
T ss_dssp             HHHHTSCSEEEECCCCCCC
T ss_pred             HHHhCCccccccccccccc
Confidence            9999999999999998754

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=2.1e-19  Score=139.93  Aligned_cols=92  Identities=21%  Similarity=0.234  Sum_probs=77.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh---------hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEV  146 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v  146 (173)
                      +.++||++|||||++|||+++|+.|+++|++|++++++.         +.+++..+++...     ...+.+|++|.+++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~~   77 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----GGKAVANYDSVEAG   77 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----TCEEEEECCCGGGH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc-----ccccccccchHHHH
Confidence            458999999999999999999999999999999997653         3445555555443     23457899999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccCCCC
Q 030706          147 ADLVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       147 ~~~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      +++++++.+++|+||+||||||+..+
T Consensus        78 ~~~v~~~~~~~G~iDiLVnNAGi~~~  103 (302)
T d1gz6a_          78 EKLVKTALDTFGRIDVVVNNAGILRD  103 (302)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCC
Confidence            99999999999999999999999764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.79  E-value=2.1e-19  Score=136.21  Aligned_cols=90  Identities=18%  Similarity=0.289  Sum_probs=76.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      |+.|++|||||++|||+++|++|+++|+  +|++++|+.+.+++..    +..+ .++.++.+|++|+++++++++++.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~~~-~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SIKD-SRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TCCC-TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----HhhC-CceEEEEEecCCHHHHHHHHHHHHH
Confidence            3569999999999999999999999995  6889999988766533    3333 3699999999999999999999998


Q ss_pred             hcCC--ccEEEEcccCCCC
Q 030706          156 NLKY--VDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~--id~lVn~AG~~~~  172 (173)
                      .++.  ||+||||||+..+
T Consensus        76 ~~~~~~idilinnAG~~~~   94 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLS   94 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCC
T ss_pred             HhCCCCeEEEEEcCcccCC
Confidence            8764  9999999998653

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.79  E-value=3.7e-19  Score=134.67  Aligned_cols=90  Identities=18%  Similarity=0.276  Sum_probs=76.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH---HcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH-
Q 030706           80 PYNVLITGSTKGIGYALAKEFL---KAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK-  155 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~---~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-  155 (173)
                      .|++|||||++|||+++|+.|+   ++|++|++++|+++.+++.. ++.+..+  ++.++.+|++|+++++++++++.+ 
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~~~~~--~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHS--NIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCT--TEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHhcCC--cEEEEEEEeccHHHHHHHHhhhHHH
Confidence            3899999999999999999996   47899999999998887654 3444333  589999999999999999998854 


Q ss_pred             -hcCCccEEEEcccCCCC
Q 030706          156 -NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 -~~g~id~lVn~AG~~~~  172 (173)
                       .+++||+||||||+..+
T Consensus        79 ~~~~~iDiLvnNAg~~~~   96 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPK   96 (248)
T ss_dssp             HGGGCCSEEEECCCCCCC
T ss_pred             hhcCCcceEEeecccccc
Confidence             67999999999998653

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.75  E-value=3.2e-18  Score=130.81  Aligned_cols=92  Identities=20%  Similarity=0.310  Sum_probs=80.1

Q ss_pred             CCCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +|+||++|||||+|  |||+++|+.|+++|++|++++|+++ .++..+++......  ..++.+|++++++++++++++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~--~~~~~~d~~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS--PYVYELDVSKEEHFKSLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCc--eeEeeecccchhhHHHHHHHHH
Confidence            58999999999765  8999999999999999999999854 45556666665443  6678999999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.+|.+|++|||+|+..
T Consensus        79 ~~~g~id~lV~nag~~~   95 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAP   95 (274)
T ss_dssp             HHTSCEEEEEECCCCCC
T ss_pred             HHcCCCCeEEeeccccc
Confidence            99999999999999864

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.75  E-value=6.1e-18  Score=129.62  Aligned_cols=91  Identities=19%  Similarity=0.177  Sum_probs=77.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEE-----------------EeeCCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGT-----------------KCDVSE  142 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~-----------------~~Dv~~  142 (173)
                      .++|||||++|||+++|+.|+++|++|++++++ .+..++..+++....+. ....+                 .+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCC-ceEEEEeecccccccccccccccccCCC
Confidence            489999999999999999999999999998764 55667777777766554 34444                 456999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcccCCCC
Q 030706          143 GNEVADLVAFAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       143 ~~~v~~~~~~~~~~~g~id~lVn~AG~~~~  172 (173)
                      +++++++++++.+++|+||+||||||+..+
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~  111 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYP  111 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCC
Confidence            999999999999999999999999998754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.74  E-value=1.5e-17  Score=126.22  Aligned_cols=91  Identities=20%  Similarity=0.206  Sum_probs=75.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCC----CHHHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVS----EGNEVADLVAFAQK  155 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~----~~~~v~~~~~~~~~  155 (173)
                      .++|||||++|||+++|+.|+++|++|++++|+.+. .++..+++....+. +..++.+|+.    +++.++++++++.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG-SAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCC-ceEEEecccccchhHHHHHHHHHHHHHH
Confidence            379999999999999999999999999999998654 56677777776554 5676666554    45677888889999


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                      ++|+||+||||||+..+
T Consensus        81 ~~g~iDilvnnAG~~~~   97 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYP   97 (266)
T ss_dssp             HHSCCCEEEECCCCCCC
T ss_pred             HhCCCCEEEECCccCCC
Confidence            99999999999998764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.72  E-value=1.4e-17  Score=125.07  Aligned_cols=78  Identities=27%  Similarity=0.434  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ++||++|||||++|||+++|+.|+++|++|++++|+++.+++        .+   ..++.+|+++.      ++++.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~--------~~---~~~~~~Dv~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR--------SG---HRYVVCDLRKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------TC---SEEEECCTTTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh--------cC---CcEEEcchHHH------HHHHHHHh
Confidence            689999999999999999999999999999999998765432        12   34568999763      45566788


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      |+||+||||||+...
T Consensus        65 g~iD~lVnnAG~~~~   79 (234)
T d1o5ia_          65 KEVDILVLNAGGPKA   79 (234)
T ss_dssp             CCCSEEEECCCCCCC
T ss_pred             CCCcEEEecccccCC
Confidence            999999999998643

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.71  E-value=4e-17  Score=118.92  Aligned_cols=85  Identities=18%  Similarity=0.268  Sum_probs=74.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ..++||+++||||++|||+++++.|+++|++|++++|+.++.++..+++.....   +....+|++|.+++++++     
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~-----   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK---VNVTAAETADDASRAEAV-----   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHT---CCCEEEECCSHHHHHHHT-----
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccc---hhhhhhhcccHHHHHHHh-----
Confidence            458999999999999999999999999999999999999999888888876543   445789999998887654     


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                        +++|+||||||+.
T Consensus        91 --~~iDilin~Ag~g  103 (191)
T d1luaa1          91 --KGAHFVFTAGAIG  103 (191)
T ss_dssp             --TTCSEEEECCCTT
T ss_pred             --cCcCeeeecCccc
Confidence              6799999999974

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.70  E-value=1.1e-17  Score=126.80  Aligned_cols=82  Identities=18%  Similarity=0.120  Sum_probs=71.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      ++|||||++|||+++|+.|+++|++|++++|+.+..++.... ...       +..+|++|+++++++++++.++||+||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~-~~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF-AET-------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH-HHH-------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh-hCc-------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            789999999999999999999999999999988776655332 222       236899999999999999999999999


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +||||||+..
T Consensus        74 iLVnNAg~~~   83 (252)
T d1zmta1          74 VLVSNDIFAP   83 (252)
T ss_dssp             EEEEECCCCC
T ss_pred             EEEECCcCCC
Confidence            9999999864

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.68  E-value=1.4e-16  Score=120.82  Aligned_cols=91  Identities=23%  Similarity=0.339  Sum_probs=76.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh---hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +++++|||||++|||++++++|+++|+ +|++++|+.   +..++..+++... + .++.++.+|++|+++++++++++.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g-~~v~~~~~Dv~d~~~~~~~~~~i~   85 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-G-ARTTVAACDVTDRESVRELLGGIG   85 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-T-CEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc-c-ccccccccccchHHHHHHhhcccc
Confidence            457999999999999999999999998 688999874   3455666666554 3 379999999999999999999875


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                      + .+++|+||||+|+...
T Consensus        86 ~-~~~i~~vv~~ag~~~~  102 (259)
T d2fr1a1          86 D-DVPLSAVFHAAATLDD  102 (259)
T ss_dssp             T-TSCEEEEEECCCCCCC
T ss_pred             c-cccccccccccccccc
Confidence            5 4689999999998764

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.67  E-value=1.4e-16  Score=120.96  Aligned_cols=92  Identities=15%  Similarity=0.214  Sum_probs=75.7

Q ss_pred             CCCCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        76 ~~~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .+|+||++||||+  ++|||+++|+.|+++|++|++++|+.++..   +++.+..+. +...+.+|++++++++.+++.+
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~---~~~~~~~~~-~~~~~~~dv~~~~~~~~~~~~v   77 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI---QRITDRLPA-KAPLLELDVQNEEHLASLAGRV   77 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHH---HHHHTTSSS-CCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHH---HHHHHHcCC-ceeeEeeecccccccccccchh
Confidence            3689999999995  578999999999999999999999876543   333333343 5778899999999999999998


Q ss_pred             HHhc---CCccEEEEcccCCC
Q 030706          154 QKNL---KYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~---g~id~lVn~AG~~~  171 (173)
                      .+.+   +.||++|||||+..
T Consensus        78 ~~~~~~~~~ld~~i~~ag~~~   98 (268)
T d2h7ma1          78 TEAIGAGNKLDGVVHSIGFMP   98 (268)
T ss_dssp             HHHHCTTCCEEEEEECCCCCC
T ss_pred             hhccccCCCcceeeecccccC
Confidence            7664   67999999999764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.3e-16  Score=120.49  Aligned_cols=85  Identities=16%  Similarity=0.264  Sum_probs=69.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++||++|||||++|||+++++.|+++|++|++++|+++.+++..    +. .  .+....+|+.+.+.++.    ..+.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~----~~-~--~~~~~~~d~~~~~~~~~----~~~~   71 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE----KY-P--GIQTRVLDVTKKKQIDQ----FANE   71 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG----GS-T--TEEEEECCTTCHHHHHH----HHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hc-c--CCceeeeeccccccccc----cccc
Confidence            389999999999999999999999999999999999987654432    22 2  36677889887665554    4556


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      ++++|+||||||+..+
T Consensus        72 ~~~id~lVn~ag~~~~   87 (245)
T d2ag5a1          72 VERLDVLFNVAGFVHH   87 (245)
T ss_dssp             CSCCSEEEECCCCCCC
T ss_pred             cccceeEEecccccCC
Confidence            7899999999998764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=4.6e-16  Score=117.65  Aligned_cols=92  Identities=20%  Similarity=0.321  Sum_probs=78.6

Q ss_pred             CCCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +|+||++|||||++  |||+++|+.|+++|++|++++|+++..+ ..+++....+  +..++..|+++..++...++++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   78 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKG-RVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELG   78 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHH-HHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHhhcC--CcceeecccchHHHHHHHHHHhh
Confidence            48999999999998  8999999999999999999999865444 4445544434  35677889999999999999999


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                      +.++++|++||||++..
T Consensus        79 ~~~~~~d~~v~~a~~~~   95 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAP   95 (258)
T ss_dssp             TTCSSEEEEEECCCCCC
T ss_pred             hcccccceEEEeecccc
Confidence            99999999999998864

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=8.8e-16  Score=115.63  Aligned_cols=90  Identities=19%  Similarity=0.288  Sum_probs=81.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.    . ......+|+.+.+.++..++++...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~----~-~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----N-NCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC----T-TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----C-Ccccccccccccccccccccccccc
Confidence            4899999999999999999999999999999999999988887776652    2 4778899999999999999999999


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                      ++.+|++++|+++..
T Consensus        77 ~~~~~~~~~~~~~~~   91 (248)
T d2o23a1          77 FGRVDVAVNCAGIAV   91 (248)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             ccccccccccccccc
Confidence            999999999988764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.2e-16  Score=123.05  Aligned_cols=91  Identities=22%  Similarity=0.179  Sum_probs=70.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEE---EecChhhHHHHHHHHHHH-hCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVII---CSRSAERVDSAVQSLREE-FGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~---~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .|++|||||++|||+++|+.|+++|++|+.   +.++.+..++..+..... ....++.++.+|++|.++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            478999999999999999999999987544   455554444443333321 1223699999999999999999988743


Q ss_pred             hcCCccEEEEcccCCCC
Q 030706          156 NLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~~  172 (173)
                        |.+|+||||||+...
T Consensus        82 --g~idilvnnag~~~~   96 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLL   96 (285)
T ss_dssp             --SCCSEEEECCCCCCC
T ss_pred             --cchhhhhhccccccc
Confidence              899999999998754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.64  E-value=3.2e-16  Score=120.63  Aligned_cols=97  Identities=19%  Similarity=0.175  Sum_probs=69.6

Q ss_pred             CCCCCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCC----------ceEEEEEee---
Q 030706           75 EPMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE----------QHVWGTKCD---  139 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----------~~~~~~~~D---  139 (173)
                      ++.|+||++|||||++  |||+++|+.|+++|++|++++|+.................          ..-....+|   
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            3558999999999876  9999999999999999999999764433222221111100          001222333   


Q ss_pred             -----------------CCCHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          140 -----------------VSEGNEVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       140 -----------------v~~~~~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                                       .++.++++++++++.++||+||+||||||+..
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~  131 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGP  131 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCT
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCccccccccccc
Confidence                             35566778999999999999999999999753

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.55  E-value=8.9e-15  Score=109.49  Aligned_cols=81  Identities=16%  Similarity=0.052  Sum_probs=67.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  157 (173)
                      +||++|||||++|||+++++.|+++|++|++++++....           . .....+.+|..+.++++.+.+++.+.+ 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----------A-SASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----------S-SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------c-cccceeecccCcHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999875431           1 245566788888999988888887765 


Q ss_pred             -CCccEEEEcccCCC
Q 030706          158 -KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 -g~id~lVn~AG~~~  171 (173)
                       ++||+||||||...
T Consensus        69 ~~~iD~lInnAG~~~   83 (236)
T d1dhra_          69 DQKVDAILCVAGGWA   83 (236)
T ss_dssp             TCCEEEEEECCCCCC
T ss_pred             CCCceEEEECCcccc
Confidence             47999999999643

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.55  E-value=7.7e-15  Score=109.67  Aligned_cols=80  Identities=15%  Similarity=0.089  Sum_probs=64.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH--hc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK--NL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~  157 (173)
                      ++++|||||++|||+++++.|+++|++|++++|+++..           . .....+.+|+.+.+......+.+.+  .+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-----------A-DSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-----------S-SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-----------c-cccceeccccCchhHHHHHHHHHHHHhcC
Confidence            34579999999999999999999999999999986531           1 1345567788888888777777666  45


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      |+||+||||||+..
T Consensus        70 g~iD~linnAG~~~   83 (235)
T d1ooea_          70 SQVDGVFCVAGGWA   83 (235)
T ss_dssp             CCEEEEEECCCCCC
T ss_pred             CCeeEEEECCcccc
Confidence            89999999999753

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.52  E-value=7.4e-15  Score=114.99  Aligned_cols=93  Identities=14%  Similarity=0.142  Sum_probs=69.4

Q ss_pred             CCCEEEEEc--CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCC----------ceEEEEE---------
Q 030706           79 PPYNVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE----------QHVWGTK---------  137 (173)
Q Consensus        79 ~~k~~lItG--a~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----------~~~~~~~---------  137 (173)
                      .+|++||||  +++|||+++|+.|+++|++|+++++..................          .......         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  5579999999999999999999998765443333222211110          0112222         


Q ss_pred             -----------eeCCCHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          138 -----------CDVSEGNEVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       138 -----------~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                                 +|+++.++++++++++.+.||+||+||||||...
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~  125 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAK  125 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCT
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeecccccccc
Confidence                       3677888999999999999999999999999764

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.44  E-value=2.9e-13  Score=101.70  Aligned_cols=73  Identities=22%  Similarity=0.230  Sum_probs=62.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-CC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-KY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~  159 (173)
                      |++|||||++|||+++|+.|+++|++|++++|+.+.                   ...|+.+.+..+..+.++..+. +.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            899999999999999999999999999999997532                   2569999999888777666554 67


Q ss_pred             ccEEEEcccCCCC
Q 030706          160 VDIWVFMSDLHSS  172 (173)
Q Consensus       160 id~lVn~AG~~~~  172 (173)
                      +|++|||||+...
T Consensus        63 id~lv~~Ag~~~~   75 (257)
T d1fjha_          63 MDGLVLCAGLGPQ   75 (257)
T ss_dssp             CSEEEECCCCCTT
T ss_pred             CcEEEEcCCCCCc
Confidence            9999999998653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.33  E-value=6.8e-12  Score=99.40  Aligned_cols=85  Identities=15%  Similarity=0.114  Sum_probs=66.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC----------------hhhHHHHHHHHHHHhCCceEEEEEeeCCCH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----------------AERVDSAVQSLREEFGEQHVWGTKCDVSEG  143 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~  143 (173)
                      |+.+|||||+|.||.+++++|++.|++|+++|.-                .....+....+....+. ++.++.+|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK-SIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCC-CCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCC-CcEEEEccCCCH
Confidence            6889999999999999999999999999998721                11122333333333343 689999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          144 NEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       144 ~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      +.++++++..     ++|+|||.|+..
T Consensus        80 ~~l~~~~~~~-----~~d~ViHlAa~~  101 (393)
T d1i24a_          80 EFLAESFKSF-----EPDSVVHFGEQR  101 (393)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCC
T ss_pred             HHHHHHHHhh-----cchheecccccc
Confidence            9999998876     799999999865

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.31  E-value=3.9e-12  Score=99.93  Aligned_cols=84  Identities=23%  Similarity=0.142  Sum_probs=63.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-----HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      |++|||||+|.||..++++|++.|++|++++|....     .+....+..  ....++.++++|++|.+++++++++.  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH--TCNPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhh--hcCCCeEEEEeecCCHHHHHHHHhcc--
Confidence            889999999999999999999999999999985432     222111111  12236899999999999999999876  


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                         .+|++||+|+..+
T Consensus        78 ---~~d~v~h~aa~~~   90 (357)
T d1db3a_          78 ---QPDEVYNLGAMSH   90 (357)
T ss_dssp             ---CCSEEEECCCCCT
T ss_pred             ---CCCEEEEeecccc
Confidence               7999999999754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.31  E-value=4.5e-12  Score=98.91  Aligned_cols=85  Identities=16%  Similarity=0.216  Sum_probs=64.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |++|||||+|.||..++++|+++|++|+++++................. .++.++.+|++|.++++.++...     ++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~~~-----~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-HHIPFYEVDLCDRKGLEKVFKEY-----KI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT-SCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcc-cCCeEEEeecCCHHHHHHHHhcc-----CC
Confidence            7899999999999999999999999999998633221111122222222 25888899999999999887653     69


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+|||+|+...
T Consensus        76 d~VihlAa~~~   86 (347)
T d1z45a2          76 DSVIHFAGLKA   86 (347)
T ss_dssp             CEEEECCSCCC
T ss_pred             CEEEEcccccc
Confidence            99999998753

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.30  E-value=5.7e-12  Score=98.07  Aligned_cols=84  Identities=20%  Similarity=0.284  Sum_probs=64.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .+|||||+|.||..+++.|++.|++|++++|...........+..... .++.++++|++|.+.+.++++..     ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG-KHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT-SCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcC-CCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            499999999999999999999999999998743222222222222222 26889999999999998888764     699


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +|||+|+...
T Consensus        76 ~ViHlAa~~~   85 (338)
T d1udca_          76 TVIHFAGLKA   85 (338)
T ss_dssp             EEEECCSCCC
T ss_pred             EEEECCCccc
Confidence            9999998653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.29  E-value=6.8e-12  Score=93.05  Aligned_cols=76  Identities=24%  Similarity=0.255  Sum_probs=63.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +|++|||||++|||+++|+.|+++|++|++++|+++.              .+...+++|+++...+..+.++..+... 
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~-   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------------EDLIYVEGDVTREEDVRRAVARAQEEAP-   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS--------------SSSEEEECCTTCHHHHHHHHHHHHHHSC-
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc--------------ccceEeeccccchhhhHHHHHhhhcccc-
Confidence            5899999999999999999999999999999998653              1456779999999999999888777654 


Q ss_pred             ccEEEEcccCC
Q 030706          160 VDIWVFMSDLH  170 (173)
Q Consensus       160 id~lVn~AG~~  170 (173)
                      .+.+++++++.
T Consensus        66 ~~~~~~~~~~~   76 (241)
T d1uaya_          66 LFAVVSAAGVG   76 (241)
T ss_dssp             EEEEEECCCCC
T ss_pred             ccchhhhhhcc
Confidence            45566666554

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=7.2e-12  Score=91.15  Aligned_cols=78  Identities=22%  Similarity=0.249  Sum_probs=64.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ..|+++||||+|+||.+++++|+++|++|.++.|++++....        ....+.++.+|++|.+++.++++       
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~-------   66 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------   66 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc-------
Confidence            457899999999999999999999999999999988764321        12257788999999998877664       


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      +.|+||+++|...
T Consensus        67 ~~d~vi~~~g~~~   79 (205)
T d1hdoa_          67 GQDAVIVLLGTRN   79 (205)
T ss_dssp             TCSEEEECCCCTT
T ss_pred             CCCEEEEEeccCC
Confidence            5899999998653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.25  E-value=6.6e-12  Score=97.78  Aligned_cols=86  Identities=20%  Similarity=0.101  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +++|++|||||+|.||..+++.|++.|++|++++|+............   ....+.++.+|++|++.+.++++..    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~i~~~~~Dl~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh---cccCCeEEEeeccChHhhhhhhhhc----
Confidence            578999999999999999999999999999999997654433322221   1125888999999999998888765    


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                       .+|++++.|+...
T Consensus        79 -~~~~v~~~aa~~~   91 (356)
T d1rkxa_          79 -QPEIVFHMAAQPL   91 (356)
T ss_dssp             -CCSEEEECCSCCC
T ss_pred             -hhhhhhhhhcccc
Confidence             7999999998653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.24  E-value=1.3e-11  Score=95.45  Aligned_cols=85  Identities=16%  Similarity=0.091  Sum_probs=64.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-----hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      |++|||||+|.||.++++.|+++|++|+.++|...     ..+......... ....+.++.+|+++.+.+++.++..  
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc-cccceEEEEccccCHHHHHHHHhhh--
Confidence            78999999999999999999999999999998432     111111111111 1235888999999999999988765  


Q ss_pred             hcCCccEEEEcccCCC
Q 030706          156 NLKYVDIWVFMSDLHS  171 (173)
Q Consensus       156 ~~g~id~lVn~AG~~~  171 (173)
                         ++|+|||+|+...
T Consensus        79 ---~~D~Vih~Aa~~~   91 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSH   91 (339)
T ss_dssp             ---CCSEEEECCSCCC
T ss_pred             ---ccchhhhcccccc
Confidence               8999999998753

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.23  E-value=4.5e-11  Score=91.93  Aligned_cols=82  Identities=20%  Similarity=0.203  Sum_probs=64.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      .+|||||+|.||.+++++|+++|++|+++++-. ....+....+..   ..++.++.+|++|.+++.++++..     ++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            489999999999999999999999999987532 222222223322   236889999999999999988766     79


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+|||+|+...
T Consensus        74 d~Vih~aa~~~   84 (338)
T d1orra_          74 DSCFHLAGQVA   84 (338)
T ss_dssp             SEEEECCCCCC
T ss_pred             ceEEeeccccc
Confidence            99999998754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.16  E-value=7.8e-11  Score=91.70  Aligned_cols=88  Identities=15%  Similarity=0.150  Sum_probs=68.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +..||+||||||+|.||..++++|+++|++|+++.|+......................+..|+.|.+++.+++      
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------   81 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI------   81 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT------
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc------
Confidence            35689999999999999999999999999999999988766555444443333334556778999998776655      


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                       ..+|.++|+|+...
T Consensus        82 -~~~~~v~~~a~~~~   95 (342)
T d1y1pa1          82 -KGAAGVAHIASVVS   95 (342)
T ss_dssp             -TTCSEEEECCCCCS
T ss_pred             -ccchhhhhhccccc
Confidence             26899999988643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=7.9e-11  Score=91.53  Aligned_cols=85  Identities=19%  Similarity=0.222  Sum_probs=64.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEec------ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR------SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      |.||||||+|.||.+++++|++.|++|+++++      ......+....+..... .++.++.+|++|.+.+++++... 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~l~~~~~~~-   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG-RSVEFEEMDILDQGALQRLFKKY-   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT-CCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcC-CCcEEEEeecccccccccccccc-
Confidence            78999999999999999999999999999874      11222222333333223 36899999999999998887653 


Q ss_pred             HhcCCccEEEEcccCCC
Q 030706          155 KNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~  171 (173)
                          .+++++|.||+..
T Consensus        81 ----~~~~i~h~Aa~~~   93 (346)
T d1ek6a_          81 ----SFMAVIHFAGLKA   93 (346)
T ss_dssp             ----CEEEEEECCSCCC
T ss_pred             ----ccccccccccccC
Confidence                7889999998754

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.12  E-value=1.4e-10  Score=88.92  Aligned_cols=83  Identities=23%  Similarity=0.062  Sum_probs=64.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |++|||||+|.||.++++.|+++|++|+.++|......  ...+.......++.++.+|++|.+.+.+++...     ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cc
Confidence            68999999999999999999999999999998653211  112222222346899999999999999888775     67


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      ++++++|+..
T Consensus        74 ~~~~~~a~~~   83 (321)
T d1rpna_          74 QEVYNLAAQS   83 (321)
T ss_dssp             SEEEECCSCC
T ss_pred             cccccccccc
Confidence            8888887654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.7e-10  Score=89.40  Aligned_cols=84  Identities=15%  Similarity=0.092  Sum_probs=61.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-----HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      |++|||||+|.||.+++++|.+.|++|+.++|....     .+........... .++.++.+|++|.+.+.+++++.  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhcc-CCcEEEEeecCCchhhHHHHhhc--
Confidence            445999999999999999999999999999985421     1221111111111 36899999999999999998776  


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                         .++++++.++..
T Consensus        79 ---~~~~v~~~~a~~   90 (347)
T d1t2aa_          79 ---KPTEIYNLGAQS   90 (347)
T ss_dssp             ---CCSEEEECCSCC
T ss_pred             ---ccceeeeeeecc
Confidence               788889888764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.02  E-value=2.3e-10  Score=89.86  Aligned_cols=83  Identities=16%  Similarity=0.207  Sum_probs=61.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEE-EEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNV-IICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V-~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      .+|||||+|.||.+++++|++.|+.| +++++......  ...+.......++.++.+|++|.+.++.+++..     .+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            58999999999999999999999865 44554221100  011112223346899999999999999988765     79


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+|||+|+...
T Consensus        75 d~VihlAa~~~   85 (361)
T d1kewa_          75 DAVMHLAAESH   85 (361)
T ss_dssp             SEEEECCSCCC
T ss_pred             CEEEECccccc
Confidence            99999998754

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.01  E-value=3e-10  Score=82.67  Aligned_cols=75  Identities=19%  Similarity=0.222  Sum_probs=59.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCE--EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDN--VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++||||||+|+||.++++.|+++|+.  |+.+.|+++..+..        . .++.++.+|+++.+++.++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~--------~-~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------G-GEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------T-CCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc--------c-CCcEEEEeeeccccccccccc-------
Confidence            68999999999999999999999964  66667876543221        1 246788999999998877663       


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      .+|.+||+|+...
T Consensus        68 ~~d~vi~~a~~~~   80 (252)
T d2q46a1          68 GIDALVILTSAVP   80 (252)
T ss_dssp             TCSEEEECCCCCC
T ss_pred             cceeeEEEEeecc
Confidence            6899999998754

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.96  E-value=3.1e-09  Score=83.53  Aligned_cols=87  Identities=17%  Similarity=0.269  Sum_probs=63.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH-cCCEEEEEec---------ChhhHHHHHHHHHHH------hCCceEEEEEeeCCCHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLK-AGDNVIICSR---------SAERVDSAVQSLREE------FGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~r---------~~~~~~~~~~~l~~~------~~~~~~~~~~~Dv~~~~  144 (173)
                      ..||||||+|.||..++++|++ .|++|+++|+         ..+..+.....+...      .....+.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            4699999999999999999986 5899999874         112233333333321      11235778899999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~~  171 (173)
                      .++++++.    ..++|+|||.|+...
T Consensus        83 ~l~~~~~~----~~~~d~ViH~Aa~~~  105 (383)
T d1gy8a_          83 FLNGVFTR----HGPIDAVVHMCAFLA  105 (383)
T ss_dssp             HHHHHHHH----SCCCCEEEECCCCCC
T ss_pred             Hhhhhhhc----cceeehhhccccccc
Confidence            88887754    457999999998754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.92  E-value=1.8e-09  Score=83.45  Aligned_cols=77  Identities=18%  Similarity=0.190  Sum_probs=59.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      .+|||||+|.||..++++|+++| .+|+++++.........       ...++.++.+|+++.+++.+.+.+      .+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~~------~~   68 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK------KC   68 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH------HC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHHh------CC
Confidence            58999999999999999999999 58999988654322211       223699999999988766553321      48


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+|||+|+...
T Consensus        69 d~Vih~a~~~~   79 (342)
T d2blla1          69 DVVLPLVAIAT   79 (342)
T ss_dssp             SEEEECBCCCC
T ss_pred             Ccccccccccc
Confidence            99999999754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.89  E-value=1.5e-09  Score=82.06  Aligned_cols=82  Identities=18%  Similarity=0.105  Sum_probs=59.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH-HHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS-AVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +++|||||+|.||.+++++|+++|++|+++.|+...... ....+..... ..+.++.+|+.|.+.+.+.+.       .
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~-~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ-LGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT-TTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhcc-CCcEEEEeecccchhhhhhcc-------C
Confidence            359999999999999999999999999999996543211 1122222222 257888999999988777653       5


Q ss_pred             ccEEEEcccCC
Q 030706          160 VDIWVFMSDLH  170 (173)
Q Consensus       160 id~lVn~AG~~  170 (173)
                      .+.+|++++..
T Consensus        76 ~~~~~~~~~~~   86 (312)
T d1qyda_          76 VDVVISALAGG   86 (312)
T ss_dssp             CSEEEECCCCS
T ss_pred             cchhhhhhhhc
Confidence            78888877643

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.89  E-value=2.4e-09  Score=80.08  Aligned_cols=62  Identities=16%  Similarity=0.197  Sum_probs=54.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .+|||||+|.||..++++|.++|++|+.++|+.                       +|+.|.++++++++..     ++|
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~-----~~d   54 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK-----KPN   54 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc-----CCC
Confidence            489999999999999999999999999998742                       4899999999888765     789


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +|||+|+...
T Consensus        55 ~vih~a~~~~   64 (281)
T d1vl0a_          55 VVINCAAHTA   64 (281)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEeeccccc
Confidence            9999998754

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=5.8e-10  Score=82.31  Aligned_cols=79  Identities=20%  Similarity=0.197  Sum_probs=58.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .+++|++|||||+|.||.+++++|+++|.  +|++++|++......       .. ..+....+|+.+.+++..      
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-------~~-~~i~~~~~D~~~~~~~~~------   76 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-------AY-KNVNQEVVDFEKLDDYAS------   76 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-------GG-GGCEEEECCGGGGGGGGG------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-------cc-ceeeeeeecccccccccc------
Confidence            36789999999999999999999999994  899999976432210       01 145566677776655443      


Q ss_pred             HhcCCccEEEEcccCC
Q 030706          155 KNLKYVDIWVFMSDLH  170 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~  170 (173)
                       .+...|++||++|..
T Consensus        77 -~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          77 -AFQGHDVGFCCLGTT   91 (232)
T ss_dssp             -GGSSCSEEEECCCCC
T ss_pred             -ccccccccccccccc
Confidence             334789999999864

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.81  E-value=2.8e-09  Score=80.09  Aligned_cols=65  Identities=23%  Similarity=0.305  Sum_probs=52.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .+|||||+|.||.++++.|.+.|. ++.+++....                   +..|++|.+.++++++..     ++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~-----~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------------------FCGDFSNPKGVAETVRKL-----RPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------------------SCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------------------ccCcCCCHHHHHHHHHHc-----CCC
Confidence            599999999999999999999886 4444543221                   246999999999988765     799


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      +|||+||+..
T Consensus        57 ~Vih~Aa~~~   66 (298)
T d1n2sa_          57 VIVNAAAHTA   66 (298)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEEeccccc
Confidence            9999999764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.78  E-value=2.3e-09  Score=83.21  Aligned_cols=82  Identities=17%  Similarity=0.142  Sum_probs=56.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEE--EEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNV--IICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V--~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|.||||||+|.||..++++|.+.|+.|  +..+.......  ...+.. ....++.++.+|+.|.+.+..++.      
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~--~~~~~~-~~~~~i~~~~~Di~d~~~~~~~~~------   72 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEA-ILGDRVELVVGDIADAELVDKLAA------   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGG-GCSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc--HHHHHH-hhcCCeEEEEccCCCHHHHHHHHh------
Confidence            3689999999999999999999999764  44442111100  001111 122378999999999998887753      


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                       ..|.+++.|+...
T Consensus        73 -~~~~v~~~a~~~~   85 (346)
T d1oc2a_          73 -KADAIVHYAAESH   85 (346)
T ss_dssp             -TCSEEEECCSCCC
T ss_pred             -hhhhhhhhhhccc
Confidence             5788899887653

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.78  E-value=7e-09  Score=80.74  Aligned_cols=80  Identities=15%  Similarity=0.026  Sum_probs=59.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      |-+++.+|||||+|.||.+++++|.++|++|+++++......      .....  ...+..+|+.+.+.+.++++     
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~--~~~~~~~D~~~~~~~~~~~~-----   78 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMF--CDEFHLVDLRVMENCLKVTE-----   78 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGT--CSEEEECCTTSHHHHHHHHT-----
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcc--cCcEEEeechhHHHHHHHhh-----
Confidence            446678999999999999999999999999999987543210      00111  34566789988887665542     


Q ss_pred             cCCccEEEEcccCCC
Q 030706          157 LKYVDIWVFMSDLHS  171 (173)
Q Consensus       157 ~g~id~lVn~AG~~~  171 (173)
                        .+|.+||.|+...
T Consensus        79 --~~d~Vih~a~~~~   91 (363)
T d2c5aa1          79 --GVDHVFNLAADMG   91 (363)
T ss_dssp             --TCSEEEECCCCCC
T ss_pred             --cCCeEeecccccc
Confidence              6899999997764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.78  E-value=1.9e-08  Score=77.69  Aligned_cols=85  Identities=21%  Similarity=0.165  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh----hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE----RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .+.|++|||||+|.||.+++++|.+.|++|+++++...    ..+........... .++.++.+|+.|........   
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~---   89 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQW-SNFKFIQGDIRNLDDCNNAC---   89 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHH-TTEEEEECCTTSHHHHHHHH---
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhccc-CCeeEEeecccccccccccc---
Confidence            45689999999999999999999999999999987332    12222111111111 25888999999988655433   


Q ss_pred             HHhcCCccEEEEcccCC
Q 030706          154 QKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~  170 (173)
                          ...+.+++.++..
T Consensus        90 ----~~~~~v~~~~a~~  102 (341)
T d1sb8a_          90 ----AGVDYVLHQAALG  102 (341)
T ss_dssp             ----TTCSEEEECCSCC
T ss_pred             ----ccccccccccccc
Confidence                3678888877654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.77  E-value=2e-08  Score=75.12  Aligned_cols=82  Identities=18%  Similarity=0.178  Sum_probs=60.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH--HHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV--DSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|.+|||||+|.||.++++.|++.|++|++++|+....  ......+..... ..+.++..|+.+.+...+.++      
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA-SGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT-TTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhcc-CCcEEEEeecccchhhhhhhh------
Confidence            46799999999999999999999999999999965432  112222222222 247788899999988776654      


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                       ..+.+|++++.
T Consensus        76 -~~~~vi~~~~~   86 (307)
T d1qyca_          76 -NVDVVISTVGS   86 (307)
T ss_dssp             -TCSEEEECCCG
T ss_pred             -hceeeeecccc
Confidence             57888888764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.67  E-value=3.4e-08  Score=75.16  Aligned_cols=65  Identities=17%  Similarity=0.258  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      -|.+|||||+|.||.+++++|+++|+.|++++...                      .+|+.|.+.++.+++.-     .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~-----~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----R   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhc-----C
Confidence            36799999999999999999999999888765432                      25899999988887643     6


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      +|+++|+|+...
T Consensus        55 ~d~v~~~a~~~~   66 (315)
T d1e6ua_          55 IDQVYLAAAKVG   66 (315)
T ss_dssp             CSEEEECCCCCC
T ss_pred             CCEEEEcchhcc
Confidence            899999987653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.61  E-value=9.4e-08  Score=73.85  Aligned_cols=77  Identities=13%  Similarity=0.094  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHH-HHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEV-ADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v-~~~~~~~~~~~  157 (173)
                      +.|+++||||+|.||.++++.|+++|++|+++.|+......  ..+..   ...+..+.+|+.|..++ +.+       +
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~~~~~~a-------~   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNVPLMDTL-------F   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCHHHHHHH-------H
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcHHHHHHH-------h
Confidence            35899999999999999999999999999999998765322  22221   12488889999986543 322       2


Q ss_pred             CCccEEEEcc
Q 030706          158 KYVDIWVFMS  167 (173)
Q Consensus       158 g~id~lVn~A  167 (173)
                      ...|.++.+.
T Consensus        70 ~~~~~~~~~~   79 (350)
T d1xgka_          70 EGAHLAFINT   79 (350)
T ss_dssp             TTCSEEEECC
T ss_pred             cCCceEEeec
Confidence            4567766654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=5.2e-08  Score=74.48  Aligned_cols=76  Identities=21%  Similarity=0.205  Sum_probs=50.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |.+|||||+|.||.+++++|+++|++|+++++......+...   ......++.....|+.+.            .+..+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~------------~~~~~   66 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE---HWIGHENFELINHDVVEP------------LYIEV   66 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG---GGTTCTTEEEEECCTTSC------------CCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH---HhcCCCceEEEehHHHHH------------HHcCC
Confidence            789999999999999999999999999999863221111111   111122344444444322            12369


Q ss_pred             cEEEEcccCCC
Q 030706          161 DIWVFMSDLHS  171 (173)
Q Consensus       161 d~lVn~AG~~~  171 (173)
                      |+|||+|+...
T Consensus        67 d~VihlAa~~~   77 (312)
T d2b69a1          67 DQIYHLASPAS   77 (312)
T ss_dssp             SEEEECCSCCS
T ss_pred             CEEEECcccCC
Confidence            99999998753

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.46  E-value=3e-07  Score=64.42  Aligned_cols=49  Identities=24%  Similarity=0.451  Sum_probs=43.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCC
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE  130 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~  130 (173)
                      ++.|+||+|+||+++|+.|++.|++|++.+|+++++++..+++......
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~   50 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGD   50 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC
Confidence            4677788899999999999999999999999999999988888765443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.35  E-value=4e-06  Score=59.16  Aligned_cols=82  Identities=18%  Similarity=0.211  Sum_probs=60.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHH---HHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQ---SLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~---~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .+++|+++|.|+ ||.|++++..|.+.|. +++++.|+.+..++...   .+.....   ......|+.+.+.+..... 
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-   89 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD---CVVTVTDLADQQAFAEALA-   89 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS---CEEEEEETTCHHHHHHHHH-
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcC---cceEeeecccccchhhhhc-
Confidence            478899999998 6999999999999996 79999998776665443   3333333   3344678888877655442 


Q ss_pred             HHHhcCCccEEEEcccC
Q 030706          153 AQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~  169 (173)
                            ..|++||+..+
T Consensus        90 ------~~diiIN~Tp~  100 (182)
T d1vi2a1          90 ------SADILTNGTKV  100 (182)
T ss_dssp             ------TCSEEEECSST
T ss_pred             ------ccceeccccCC
Confidence                  68999999654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.34  E-value=2.6e-07  Score=66.49  Aligned_cols=70  Identities=21%  Similarity=0.154  Sum_probs=47.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|.+|||||+|.||.+++++|+++|+  +|+...|++..            ...++   ..++.|..++..      ...
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~------------~~~~~---~~~~~d~~~~~~------~~~   60 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRL---DNPVGPLAELLP------QLD   60 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTE---ECCBSCHHHHGG------GCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh------------hcccc---cccccchhhhhh------ccc
Confidence            48999999999999999999999996  67777765422            01122   334444433211      223


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      +.+|.+|+++|..
T Consensus        61 ~~~d~vi~~~g~~   73 (212)
T d2a35a1          61 GSIDTAFCCLGTT   73 (212)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             cchheeeeeeeee
Confidence            5789999999864

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=4e-06  Score=58.49  Aligned_cols=79  Identities=20%  Similarity=0.234  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      +|.+++|+|++|++|...+......|++|+++++++++.+..    ++ .+...+    +|..+.+..+++.+...  ..
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~-~Ga~~v----i~~~~~~~~~~i~~~t~--~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQ-NGAHEV----FNHREVNYIDKIKKYVG--EK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HH-TTCSEE----EETTSTTHHHHHHHHHC--TT
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----cc-cCcccc----cccccccHHHHhhhhhc--cC
Confidence            578999999999999998888888899999999877654322    22 233222    37777654444433321  23


Q ss_pred             CccEEEEccc
Q 030706          159 YVDIWVFMSD  168 (173)
Q Consensus       159 ~id~lVn~AG  168 (173)
                      .+|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            6899999876

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.23  E-value=1.1e-06  Score=62.06  Aligned_cols=80  Identities=15%  Similarity=0.150  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -+|.++||+|++|++|.+.+......|++|+.+.+++++.+.    ++. .+...+    +|..+++..+.+.+..  ..
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~----~~~-~Ga~~v----i~~~~~~~~~~~~~~~--~~   96 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY----LKQ-IGFDAA----FNYKTVNSLEEALKKA--SP   96 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHH-TTCSEE----EETTSCSCHHHHHHHH--CT
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH----HHh-hhhhhh----cccccccHHHHHHHHh--hc
Confidence            358899999999999999888888889999999998765432    222 233222    3555555555544332  22


Q ss_pred             CCccEEEEccc
Q 030706          158 KYVDIWVFMSD  168 (173)
Q Consensus       158 g~id~lVn~AG  168 (173)
                      +++|+++++.|
T Consensus        97 ~Gvd~v~D~vG  107 (182)
T d1v3va2          97 DGYDCYFDNVG  107 (182)
T ss_dssp             TCEEEEEESSC
T ss_pred             CCCceeEEecC
Confidence            47999999887

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.20  E-value=1.4e-06  Score=66.26  Aligned_cols=80  Identities=18%  Similarity=0.187  Sum_probs=53.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCE------EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDN------VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+|||||+|.||.++++.|+++|+.      |+..+.......  ...+.......++.++..|+++........     
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLAREL-----   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhhhcCCCeEEEEeccccchhhhccc-----
Confidence            5899999999999999999999874      444443211100  001111112236889999999988665432     


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                        ...|++||.|+..
T Consensus        75 --~~~d~vi~~a~~~   87 (322)
T d1r6da_          75 --RGVDAIVHFAAES   87 (322)
T ss_dssp             --TTCCEEEECCSCC
T ss_pred             --cccceEEeecccc
Confidence              3789999999775

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.10  E-value=1.1e-05  Score=55.79  Aligned_cols=82  Identities=20%  Similarity=0.183  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  157 (173)
                      .|.+++|+| +|++|...+..+...|++|+++++++++.+...+     .+. ...+ ..|- ..++.....+++.+.. 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-----~ga-~~~~-~~~~-~~~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-----CGA-DVTL-VVDP-AKEEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----TTC-SEEE-ECCT-TTSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-----cCC-cEEE-eccc-cccccchhhhhhhcccc
Confidence            467899997 6899999988888889999999999877543322     232 1222 2222 2233455555666555 


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +.+|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence            368999999874

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.10  E-value=8.7e-06  Score=57.59  Aligned_cols=87  Identities=20%  Similarity=0.101  Sum_probs=55.5

Q ss_pred             CCCEEEE-EcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH-h
Q 030706           79 PPYNVLI-TGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK-N  156 (173)
Q Consensus        79 ~~k~~lI-tGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~  156 (173)
                      +|.+++| +||+|++|.+.+.-.-..|++|+.+.++.+..++..+.+++.+.. .+.  ..|-.+..++...+.++.+ .
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad-~vi--~~~~~~~~~~~~~v~~~~~~~  104 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT-QVI--TEDQNNSREFGPTIKEWIKQS  104 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS-EEE--EHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc-EEE--eccccchhHHHHHHHHHHhhc
Confidence            3444455 799999999887776667999999998877777776666665443 222  1121112223333444433 4


Q ss_pred             cCCccEEEEccc
Q 030706          157 LKYVDIWVFMSD  168 (173)
Q Consensus       157 ~g~id~lVn~AG  168 (173)
                      .+.+|+++++.|
T Consensus       105 g~~vdvv~D~vg  116 (189)
T d1gu7a2         105 GGEAKLALNCVG  116 (189)
T ss_dssp             TCCEEEEEESSC
T ss_pred             cCCceEEEECCC
Confidence            457999999876

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=3.6e-06  Score=58.87  Aligned_cols=80  Identities=19%  Similarity=0.170  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      +|++++|+||+|++|...+......|++|+++++++++.+...    +. +...    .+|..+++-.+++.+ +. ...
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~----~l-Ga~~----vi~~~~~d~~~~v~~-~t-~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----KA-GAWQ----VINYREEDLVERLKE-IT-GGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HH-TCSE----EEETTTSCHHHHHHH-HT-TTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH----hc-CCeE----EEECCCCCHHHHHHH-Hh-CCC
Confidence            5789999999999999888887778999999999987754432    22 3322    247776554444322 21 224


Q ss_pred             CccEEEEcccC
Q 030706          159 YVDIWVFMSDL  169 (173)
Q Consensus       159 ~id~lVn~AG~  169 (173)
                      .+|+++++.|-
T Consensus        97 g~d~v~d~~g~  107 (179)
T d1qora2          97 KVRVVYDSVGR  107 (179)
T ss_dssp             CEEEEEECSCG
T ss_pred             CeEEEEeCccH
Confidence            68999998863

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.08  E-value=9.2e-06  Score=56.10  Aligned_cols=64  Identities=17%  Similarity=0.162  Sum_probs=46.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLV  150 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~  150 (173)
                      +|+++|.|+ |.+|..+|+.|+++|++|++++|+.+..++..+.    .+.  ......+..+.......+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~----~~~--~~~~~~~~~~~~~~~~~i   65 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----VQH--STPISLDVNDDAALDAEV   65 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT----CTT--EEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc----ccc--cccccccccchhhhHhhh
Confidence            689999886 8999999999999999999999999877665433    232  344445555555444443

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.03  E-value=2.2e-05  Score=54.17  Aligned_cols=73  Identities=25%  Similarity=0.359  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +.++.++|.|+ |++|..+++.|...|+ ++.++.|+.++.++...++    +. ++    .+   .+++.+.+      
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~----~~-~~----~~---~~~~~~~l------   82 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----GG-EA----VR---FDELVDHL------   82 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----TC-EE----CC---GGGHHHHH------
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh----hc-cc----cc---chhHHHHh------
Confidence            78899999998 9999999999999997 6999999988776665543    32 11    12   23333332      


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                       ...|+||++.+..
T Consensus        83 -~~~Divi~atss~   95 (159)
T d1gpja2          83 -ARSDVVVSATAAP   95 (159)
T ss_dssp             -HTCSEEEECCSSS
T ss_pred             -ccCCEEEEecCCC
Confidence             3689999988754

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.99  E-value=1.3e-05  Score=56.05  Aligned_cols=77  Identities=19%  Similarity=0.164  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  157 (173)
                      +|.++||+||+|++|...+..+...|++|+++.+++++.+    .+++ .+...    ..|..+++-.++    +++.. 
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~----~l~~-~Ga~~----vi~~~~~~~~~~----v~~~t~   91 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE----MLSR-LGVEY----VGDSRSVDFADE----ILELTD   91 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHT-TCCSE----EEETTCSTHHHH----HHHHTT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc----cccc-ccccc----cccCCccCHHHH----HHHHhC
Confidence            4789999999999999988888778999999998776543    2222 23322    235555543333    33332 


Q ss_pred             -CCccEEEEccc
Q 030706          158 -KYVDIWVFMSD  168 (173)
Q Consensus       158 -g~id~lVn~AG  168 (173)
                       .++|+++.+.|
T Consensus        92 ~~g~d~v~d~~g  103 (183)
T d1pqwa_          92 GYGVDVVLNSLA  103 (183)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCEEEEEeccc
Confidence             36999999987

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.91  E-value=2e-05  Score=52.42  Aligned_cols=60  Identities=18%  Similarity=0.348  Sum_probs=46.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADL  149 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~  149 (173)
                      .++|.|+ |.+|+.+++.|.+.|+.|++++.+++..++..++    .+   +.++..|.+|++.++++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~----~~---~~vi~Gd~~~~~~l~~~   61 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----ID---ALVINGDCTKIKTLEDA   61 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----CS---SEEEESCTTSHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh----hh---hhhccCcccchhhhhhc
Confidence            5788887 8999999999999999999999998876654332    22   34566788877766544

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.90  E-value=4.7e-05  Score=52.85  Aligned_cols=75  Identities=17%  Similarity=0.209  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -+|++++|+|++|++|...+......|++|+.+++++++.+...    + .+...+    .|..+.      .+++ ...
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~----~-lGa~~~----i~~~~~------~~~~-~~~   89 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----A-LGAEEA----ATYAEV------PERA-KAW   89 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----H-TTCSEE----EEGGGH------HHHH-HHT
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc----c-ccccee----eehhhh------hhhh-hcc
Confidence            46789999999999999888877778999999998877654332    2 232222    243321      1222 234


Q ss_pred             CCccEEEEccc
Q 030706          158 KYVDIWVFMSD  168 (173)
Q Consensus       158 g~id~lVn~AG  168 (173)
                      +++|++|++.|
T Consensus        90 ~g~D~v~d~~G  100 (171)
T d1iz0a2          90 GGLDLVLEVRG  100 (171)
T ss_dssp             TSEEEEEECSC
T ss_pred             ccccccccccc
Confidence            57999999877

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.88  E-value=1.2e-05  Score=59.70  Aligned_cols=30  Identities=20%  Similarity=0.459  Sum_probs=27.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEec
Q 030706           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSR  112 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~-~V~~~~r  112 (173)
                      +|||||+|.||..++++|+++|+ .|+++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~   32 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC
Confidence            79999999999999999999995 6888764

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.87  E-value=2.9e-05  Score=53.94  Aligned_cols=49  Identities=18%  Similarity=0.331  Sum_probs=42.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~  126 (173)
                      .+++|.++|.|+ ||-+++++..|.+.|.+|+++.|+.++.++..+.+..
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~   63 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH   63 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh
Confidence            467899999986 7899999999999999999999999888877766544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=6.6e-05  Score=54.52  Aligned_cols=78  Identities=22%  Similarity=0.279  Sum_probs=54.2

Q ss_pred             CCCCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC
Q 030706           77 MLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV  140 (173)
Q Consensus        77 ~~~~k~~lItGa----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv  140 (173)
                      .+.|+.+|||+|                +|-+|.++|+.+..+|++|.++.-.....          .+. .+..+  .+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~----------~p~-~~~~~--~~   69 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------TPP-FVKRV--DV   69 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------CCT-TEEEE--EC
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC----------ccc-ccccc--ee
Confidence            478999999988                47899999999999999999887543210          111 23333  45


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          141 SEGNEVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       141 ~~~~~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      ...+++...+   .+.+...|++|.+|++.
T Consensus        70 ~t~~~m~~~~---~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          70 MTALEMEAAV---NASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             CSHHHHHHHH---HHHGGGCSEEEECCBCC
T ss_pred             hhhHHHHHHH---HhhhccceeEeeeechh
Confidence            5555554444   34445679999999875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.77  E-value=0.00011  Score=51.17  Aligned_cols=81  Identities=19%  Similarity=0.159  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ..|.+++|+|+ |++|...+..+...|+ +|+++++++++.+.. ++    .+...    .+|..+.+ ..+..+++.+.
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~----lGa~~----vi~~~~~~-~~~~~~~i~~~   95 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EE----IGADL----TLNRRETS-VEERRKAIMDI   95 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HH----TTCSE----EEETTTSC-HHHHHHHHHHH
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc-cc----ccceE----EEeccccc-hHHHHHHHHHh
Confidence            35789999986 8999998888888897 899999988775432 22    23212    22544332 23333444443


Q ss_pred             c--CCccEEEEcccC
Q 030706          157 L--KYVDIWVFMSDL  169 (173)
Q Consensus       157 ~--g~id~lVn~AG~  169 (173)
                      .  .++|++|.++|.
T Consensus        96 ~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          96 THGRGADFILEATGD  110 (182)
T ss_dssp             TTTSCEEEEEECSSC
T ss_pred             hCCCCceEEeecCCc
Confidence            3  258999999875

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.77  E-value=8e-05  Score=51.76  Aligned_cols=75  Identities=19%  Similarity=0.327  Sum_probs=55.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+++|+++|.|+ ||.+++++..|.+.+.+|+++.|+.++.+...+.+... .  .+..+..|-.              .
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~-~--~~~~~~~~~~--------------~   76 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY-G--NIQAVSMDSI--------------P   76 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG-S--CEEEEEGGGC--------------C
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc-c--ccchhhhccc--------------c
Confidence            467899999876 78899999999987889999999998888887777543 2  2444333311              1


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      ....|++||+..+
T Consensus        77 ~~~~diiIN~tp~   89 (171)
T d1p77a1          77 LQTYDLVINATSA   89 (171)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             ccccceeeecccc
Confidence            2478999998654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.70  E-value=0.00013  Score=50.17  Aligned_cols=80  Identities=19%  Similarity=0.239  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .+.+++|.|++|++|...+..+...| .+|+++++++++.+...    + .+...    ..|.++.+..+++.+..  .-
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~----~-~Ga~~----~i~~~~~~~~~~~~~~~--~~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK----R-AGADY----VINASMQDPLAEIRRIT--ES   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH----H-HTCSE----EEETTTSCHHHHHHHHT--TT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH----H-cCCce----eeccCCcCHHHHHHHHh--hc
Confidence            56789999999999999998888888 58999998876544332    2 23211    23555555444443322  12


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +.+|++|.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            468999999874

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=0.00034  Score=48.07  Aligned_cols=80  Identities=18%  Similarity=0.184  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++.+-. +    ..+...  ++..+-.+..   ...+.+...+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~----~~Ga~~--~~~~~~~~~~---~~~~~~~~~~   94 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-K----EIGADL--VLQISKESPQ---EIARKVEGQL   94 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-H----HTTCSE--EEECSSCCHH---HHHHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-H----HhCCcc--cccccccccc---cccccccccC
Confidence            4678999986 9999999988888898 799999998765532 2    223322  1222223333   3334444334


Q ss_pred             -CCccEEEEcccC
Q 030706          158 -KYVDIWVFMSDL  169 (173)
Q Consensus       158 -g~id~lVn~AG~  169 (173)
                       ..+|++|.++|.
T Consensus        95 g~g~Dvvid~~G~  107 (171)
T d1pl8a2          95 GCKPEVTIECTGA  107 (171)
T ss_dssp             TSCCSEEEECSCC
T ss_pred             CCCceEEEeccCC
Confidence             368999999874

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=5e-05  Score=45.90  Aligned_cols=42  Identities=19%  Similarity=0.280  Sum_probs=35.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      .++..++|+||+||+|......+...|++|+.+.+++++.+-
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~   71 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHH
Confidence            357789999999999998888777789999999998877543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.63  E-value=5.7e-05  Score=52.87  Aligned_cols=79  Identities=20%  Similarity=0.115  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .+|.++||+||+||+|...+......|++|+.+.+++++.+...    + .+...+.    |-.+.  ..+.+...  ..
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~-lGa~~vi----~~~~~--~~~~~~~~--~~   96 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----V-LGAKEVL----AREDV--MAERIRPL--DK   96 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----H-TTCSEEE----ECC-----------C--CS
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----h-cccceee----ecchh--HHHHHHHh--hc
Confidence            45789999999999998877777678999999999887654332    2 2332222    32221  12222111  22


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      +++|++|++.|-
T Consensus        97 ~gvD~vid~vgg  108 (176)
T d1xa0a2          97 QRWAAAVDPVGG  108 (176)
T ss_dssp             CCEEEEEECSTT
T ss_pred             cCcCEEEEcCCc
Confidence            589999999874

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.56  E-value=4.4e-05  Score=50.59  Aligned_cols=60  Identities=20%  Similarity=0.320  Sum_probs=44.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADL  149 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~  149 (173)
                      |.++|.|. |-+|+.+++.|.+.|..|++++.+++..++..    .. +   ...+..|.++++.++++
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~-~---~~~~~gd~~~~~~l~~a   60 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY-A---THAVIANATEENELLSL   60 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TT-C---SEEEECCTTCTTHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----Hh-C---Ccceeeecccchhhhcc
Confidence            45788876 78999999999999999999999987765542    11 1   23445677777665543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.49  E-value=7e-05  Score=52.16  Aligned_cols=80  Identities=15%  Similarity=0.128  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      +|.+++|.|+ |++|...+..+...|+ +|+++++++++.+.. ++    .+...    .+|..+.+..+++.+ ... .
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~----lGa~~----~i~~~~~~~~~~v~~-~t~-g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KF----YGATD----ILNYKNGHIEDQVMK-LTN-G   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HH----HTCSE----EECGGGSCHHHHHHH-HTT-T
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-Hh----hCccc----cccccchhHHHHHHH-Hhh-c
Confidence            4678999976 8999988888877896 799999987764433 22    23212    235544333333222 211 1


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      ..+|++|.++|..
T Consensus        95 ~G~D~vid~~g~~  107 (174)
T d1jqba2          95 KGVDRVIMAGGGS  107 (174)
T ss_dssp             SCEEEEEECSSCT
T ss_pred             cCcceEEEccCCH
Confidence            3599999999854

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.42  E-value=7.4e-05  Score=52.50  Aligned_cols=78  Identities=15%  Similarity=0.109  Sum_probs=48.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++++||+||+||+|...+......|++ |+.+..+++.......+    .+...    ..|..+++. .+.++++..  .
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~----~gad~----vi~~~~~~~-~~~~~~~~~--~   99 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSE----LGFDA----AVNYKTGNV-AEQLREACP--G   99 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHH----SCCSE----EEETTSSCH-HHHHHHHCT--T
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhc----ccceE----EeeccchhH-HHHHHHHhc--c
Confidence            478999999999998877766668975 55556665554333322    23321    236655543 333443322  3


Q ss_pred             CccEEEEccc
Q 030706          159 YVDIWVFMSD  168 (173)
Q Consensus       159 ~id~lVn~AG  168 (173)
                      ++|+++.+.|
T Consensus       100 GvDvv~D~vG  109 (187)
T d1vj1a2         100 GVDVYFDNVG  109 (187)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEecCC
Confidence            6999999886

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.40  E-value=0.00046  Score=46.58  Aligned_cols=78  Identities=15%  Similarity=0.219  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHH--hCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREE--FGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .+.+.+.|.|+ |.+|..++..|+..|  .+|+++|++++..+....++...  ... .......|.   ++        
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~-~~~~~~~d~---~~--------   69 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTA-PKKIYSGEY---SD--------   69 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSC-CCEEEECCG---GG--------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccC-CceEeeccH---HH--------
Confidence            44567888895 899999999999988  58999999987776666666542  122 233333342   21        


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                         ...-|++|..||...
T Consensus        70 ---~~~adivvitag~~~   84 (146)
T d1ez4a1          70 ---CKDADLVVITAGAPQ   84 (146)
T ss_dssp             ---GTTCSEEEECCCC--
T ss_pred             ---hccccEEEEeccccc
Confidence               236799999998754

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.37  E-value=0.00028  Score=48.76  Aligned_cols=80  Identities=14%  Similarity=0.163  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~  155 (173)
                      -+|.+++|.|+ ||+|...+..+...| .+|+++++++++.+...     ..+...+    .|..+ .+.+.+..++.  
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-----~~Ga~~~----i~~~~~~~~~~~~~~~~--   94 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-----EVGATEC----VNPQDYKKPIQEVLTEM--   94 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----HTTCSEE----ECGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-----HhCCeeE----EecCCchhHHHHHHHHH--
Confidence            45789999998 689999999999988 58999999888754332     2232111    23322 23344444433  


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                      ..+++|++|.+.|.
T Consensus        95 ~~~G~D~vid~~G~  108 (176)
T d2jhfa2          95 SNGGVDFSFEVIGR  108 (176)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             hcCCCCEEEecCCc
Confidence            22579999998875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.37  E-value=0.00027  Score=49.10  Aligned_cols=81  Identities=14%  Similarity=0.147  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.|.+++|.|+ ||+|...+..+...| .+|++++.++++++-..+     .+... .   .|..+.+...+.+.+.. .
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-----~GA~~-~---in~~~~~~~~~~~~~~~-~   96 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-----VGATE-C---ISPKDSTKPISEVLSEM-T   96 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----HTCSE-E---ECGGGCSSCHHHHHHHH-H
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-----cCCcE-E---ECccccchHHHHHHHHh-c
Confidence            45789999986 899999999999999 589999999988653322     23322 1   23333332222222222 2


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      .+++|++|.+.|.
T Consensus        97 g~G~d~vi~~~g~  109 (176)
T d1d1ta2          97 GNNVGYTFEVIGH  109 (176)
T ss_dssp             TSCCCEEEECSCC
T ss_pred             cccceEEEEeCCc
Confidence            3479999998774

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.0011  Score=45.21  Aligned_cols=76  Identities=22%  Similarity=0.267  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|.+++|.|+ |++|...+..+...|+++++++++.++.+ ...++    +...    .+|..+.+...       +..
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l----Gad~----~i~~~~~~~~~-------~~~   91 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL----GADE----VVNSRNADEMA-------AHL   91 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH----TCSE----EEETTCHHHHH-------TTT
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc----CCcE----EEECchhhHHH-------Hhc
Confidence            35789999986 89999888777778999999998887653 22322    3322    23666554322       223


Q ss_pred             CCccEEEEcccCC
Q 030706          158 KYVDIWVFMSDLH  170 (173)
Q Consensus       158 g~id~lVn~AG~~  170 (173)
                      +.+|++|.++|..
T Consensus        92 ~~~D~vid~~g~~  104 (168)
T d1uufa2          92 KSFDFILNTVAAP  104 (168)
T ss_dssp             TCEEEEEECCSSC
T ss_pred             CCCceeeeeeecc
Confidence            5799999998854

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.00052  Score=46.27  Aligned_cols=74  Identities=9%  Similarity=0.081  Sum_probs=53.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      .++|.|. |.+|+.+++.|.+.|..|++++.+++......+++...    .+.++..|.+|++.++++-      ....|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~----~~~vi~Gd~~d~~~L~~a~------i~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD----NADVIPGDSNDSSVLKKAG------IDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT----TCEEEESCTTSHHHHHHHT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC----CcEEEEccCcchHHHHHhc------cccCC
Confidence            4777776 68999999999999999999999887655554444321    4677889999988766541      23456


Q ss_pred             EEEEc
Q 030706          162 IWVFM  166 (173)
Q Consensus       162 ~lVn~  166 (173)
                      .+|..
T Consensus        74 ~vi~~   78 (153)
T d1id1a_          74 AILAL   78 (153)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            66654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.28  E-value=0.002  Score=43.74  Aligned_cols=41  Identities=20%  Similarity=0.195  Sum_probs=33.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      -.|.+++|.|+ |++|...+..+...|++|+++++++++.+.
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~   66 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLEL   66 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHh
Confidence            34778999876 999999888777789999999998876543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.24  E-value=0.0035  Score=42.79  Aligned_cols=40  Identities=20%  Similarity=0.213  Sum_probs=35.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~  121 (173)
                      |++-|.|+ |.+|.+++..|++.|++|.+.+|+++..+...
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~   41 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   41 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            67888887 79999999999999999999999987765543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.23  E-value=0.0016  Score=44.16  Aligned_cols=83  Identities=16%  Similarity=0.090  Sum_probs=55.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH--------HHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL--------REEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +.|.|. |-+|.++++.|.+.|++|++.+|+++..++..+.-        .+......+.++.+   ..+.++++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            556654 89999999999999999999999987766543321        00111223444332   3567888888887


Q ss_pred             HhcCCccEEEEcccC
Q 030706          155 KNLKYVDIWVFMSDL  169 (173)
Q Consensus       155 ~~~g~id~lVn~AG~  169 (173)
                      ....+=.++++.+++
T Consensus        79 ~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          79 PHLSPTAIVTDVASV   93 (165)
T ss_dssp             GGSCTTCEEEECCSC
T ss_pred             hhcccccceeecccc
Confidence            766555666666543

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.22  E-value=0.0011  Score=44.42  Aligned_cols=40  Identities=20%  Similarity=0.220  Sum_probs=35.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      .-|++.|.||.|-+|..+++.|.+.|++|.+.+++.....
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~   47 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA   47 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence            3468999999999999999999999999999999875543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.19  E-value=0.00099  Score=45.25  Aligned_cols=82  Identities=13%  Similarity=0.057  Sum_probs=52.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      +-+.+++.|.|+ |.+|..++..|+..+ ++++++|.+++..+.....+....  ........ .+ .+.+   ..    
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~-~~~~---~~----   73 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-AE-YSYE---AA----   73 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-EE-CSHH---HH----
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-cc-Cchh---hh----
Confidence            344567888897 999999999888888 689999998877666655554421  11111111 11 1221   11    


Q ss_pred             HHhcCCccEEEEcccCCC
Q 030706          154 QKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~  171 (173)
                         ...-|++|..||...
T Consensus        74 ---~~~adiVvitag~~~   88 (154)
T d1pzga1          74 ---LTGADCVIVTAGLTK   88 (154)
T ss_dssp             ---HTTCSEEEECCSCSS
T ss_pred             ---hcCCCeEEEeccccc
Confidence               126899999998754

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.17  E-value=0.00025  Score=48.98  Aligned_cols=41  Identities=29%  Similarity=0.379  Sum_probs=33.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      .+.++||+||+||+|...+......|++|+.+.+++++.+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~   63 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY   63 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHH
Confidence            45679999999999998776666679999999998877544

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.13  E-value=0.00039  Score=48.44  Aligned_cols=41  Identities=20%  Similarity=0.306  Sum_probs=34.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      .++++||+||+||+|...+......|++|+.+.+++++.+.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~   71 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHH
Confidence            34689999999999987777666789999999998877543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.11  E-value=0.0024  Score=42.91  Aligned_cols=79  Identities=11%  Similarity=0.150  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhC--CceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFG--EQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      .++.+.|.|+ |.+|..++..|+..|  .+++++|++++..+....++.....  ...+.....|.   +          
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~----------   70 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D----------   70 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G----------
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H----------
Confidence            4567888896 999999999999988  3799999998877766666665321  11233333332   2          


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                       ....-|++|.+||....
T Consensus        71 -~l~daDvvvitag~~~~   87 (148)
T d1ldna1          71 -DCRDADLVVICAGANQK   87 (148)
T ss_dssp             -GTTTCSEEEECCSCCCC
T ss_pred             -HhccceeEEEecccccc
Confidence             12367999999997654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.11  E-value=0.0013  Score=45.14  Aligned_cols=78  Identities=21%  Similarity=0.266  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++.+...    + .+...+    .|..+ +.++...+..  ..
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~-~ga~~~----i~~~~-~~~~~~~~~~--~~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----R-LGADHV----VDARR-DPVKQVMELT--RG   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----H-TTCSEE----EETTS-CHHHHHHHHT--TT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----h-ccccee----ecCcc-cHHHHHHHhh--CC
Confidence            4678999885 9999988888877785 7778888876543322    2 233222    24332 3344443321  12


Q ss_pred             CCccEEEEcccC
Q 030706          158 KYVDIWVFMSDL  169 (173)
Q Consensus       158 g~id~lVn~AG~  169 (173)
                      ..+|++|.++|.
T Consensus        99 ~g~d~vid~~g~  110 (172)
T d1h2ba2          99 RGVNVAMDFVGS  110 (172)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCceEEEEecCc
Confidence            369999999885

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.09  E-value=0.0011  Score=45.79  Aligned_cols=80  Identities=16%  Similarity=0.171  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~  155 (173)
                      -.|.+++|.|+ |+||...+..+...|+ +|++++.++++.+- .    +..+...+    .|..+ .+.++...+..  
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~-a----~~~Ga~~~----i~~~~~~~~~~~~~~~~--   94 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK-A----KALGATDC----LNPRELDKPVQDVITEL--   94 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-H----HHTTCSEE----ECGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHH-H----HHhCCCcc----cCCccchhhhhhhHhhh--
Confidence            35678999975 9999999988888897 68888988876432 2    22343221    23222 22334433333  


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                      ..+++|++|.++|.
T Consensus        95 ~~~G~d~vie~~G~  108 (174)
T d1e3ia2          95 TAGGVDYSLDCAGT  108 (174)
T ss_dssp             HTSCBSEEEESSCC
T ss_pred             hcCCCcEEEEeccc
Confidence            23579999999885

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.07  E-value=0.00083  Score=46.28  Aligned_cols=79  Identities=15%  Similarity=0.168  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.|.+++|.|+ |+||...+..+...|++ |+++++++++.+.. ++    .+...    .+|..+++..+ .+.++.  
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~----~Ga~~----~i~~~~~~~~~-~i~~~t--   93 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQ----LGATH----VINSKTQDPVA-AIKEIT--   93 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HH----HTCSE----EEETTTSCHHH-HHHHHT--
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HH----cCCeE----EEeCCCcCHHH-HHHHHc--
Confidence            35778999987 89999999887778874 56677777654432 22    23322    23555543333 233321  


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      .+++|++|.+.|.
T Consensus        94 ~gg~D~vid~~G~  106 (174)
T d1f8fa2          94 DGGVNFALESTGS  106 (174)
T ss_dssp             TSCEEEEEECSCC
T ss_pred             CCCCcEEEEcCCc
Confidence            2579999999874

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.07  E-value=0.0051  Score=41.45  Aligned_cols=40  Identities=25%  Similarity=0.275  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++.+.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~   66 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL   66 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh
Confidence            4678899875 899998888888889999999998876543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.06  E-value=0.00085  Score=46.00  Aligned_cols=80  Identities=15%  Similarity=0.164  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~  155 (173)
                      -+|.+++|.|+ ||+|...+..+...|+ +|+++++++++.+. .++    .+...+    .|..+ .+.+.+.+.+.  
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~----lGa~~~----i~~~~~~~~~~~~~~~~--   94 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKE----FGATEC----INPQDFSKPIQEVLIEM--   94 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHH----HTCSEE----ECGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHH----hCCcEE----EeCCchhhHHHHHHHHH--
Confidence            35788999987 5899988888888885 67777787766432 233    233222    23322 23344444433  


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                      ..+++|++|.+.|.
T Consensus        95 ~~~g~D~vid~~G~  108 (176)
T d2fzwa2          95 TDGGVDYSFECIGN  108 (176)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEeeecCCC
Confidence            23479999999874

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.05  E-value=0.0017  Score=44.72  Aligned_cols=80  Identities=16%  Similarity=0.230  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHH-HHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNE-VADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~  155 (173)
                      -.|.+++|.|+ ||+|...+..+...|+ +|+++++++++++...     ..+...+    .|..+.+. +++.....  
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-----~lGa~~~----i~~~~~d~~~~~~~~~~--   93 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-----ELGATEC----LNPKDYDKPIYEVICEK--   93 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-----HTTCSEE----ECGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-----HcCCcEE----EcCCCchhHHHHHHHHh--
Confidence            45789999985 8999999998888885 7999999888764432     2343221    24433222 33333222  


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                      ..+.+|++|.++|.
T Consensus        94 ~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 TNGGVDYAVECAGR  107 (174)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEEEEcCCC
Confidence            23579999998874

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.02  E-value=0.0013  Score=46.22  Aligned_cols=80  Identities=20%  Similarity=0.139  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -.|.+++|.|+ |++|...+..+...|+ +|++++.++++++..     ...+. ..   ..|-.+. ++.+.+.++. .
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a-----~~~Ga-~~---~~~~~~~-~~~~~i~~~t-~   91 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-----KAQGF-EI---ADLSLDT-PLHEQIAALL-G   91 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-----HHTTC-EE---EETTSSS-CHHHHHHHHH-S
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh-----hhccc-cE---EEeCCCc-CHHHHHHHHh-C
Confidence            45789999986 8999888877767775 889999987765432     22333 11   1233333 3333333332 2


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      ...+|++|.+.|.
T Consensus        92 g~g~D~vid~vG~  104 (195)
T d1kola2          92 EPEVDCAVDAVGF  104 (195)
T ss_dssp             SSCEEEEEECCCT
T ss_pred             CCCcEEEEECccc
Confidence            2469999999884

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.0021  Score=48.13  Aligned_cols=24  Identities=33%  Similarity=0.407  Sum_probs=21.6

Q ss_pred             CchHHHHHHHHHHHcCCEEEEEec
Q 030706           89 TKGIGYALAKEFLKAGDNVIICSR  112 (173)
Q Consensus        89 ~~gIG~aia~~l~~~G~~V~~~~r  112 (173)
                      +|..|.++|+.+..+|+.|+++.+
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             chHHHHHHHHHHHHcCCEEEEEec
Confidence            577999999999999999998864

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.99  E-value=0.0044  Score=42.52  Aligned_cols=86  Identities=16%  Similarity=0.150  Sum_probs=60.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH---------------HHHHhCCceEEEEEeeCCCHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS---------------LREEFGEQHVWGTKCDVSEGNE  145 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---------------l~~~~~~~~~~~~~~Dv~~~~~  145 (173)
                      +++-|.|- |-+|..+++.|++.|++|++.+|++++.+++.++               +......  ...+...+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~--~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKK--PRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCS--SCEEEECSCTTHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcc--cceEEEecCchHH
Confidence            35667765 7899999999999999999999999887766432               1111111  2233445677788


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccC
Q 030706          146 VADLVAFAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       146 v~~~~~~~~~~~g~id~lVn~AG~  169 (173)
                      +..+++.+......=+++|...-+
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHHhccccCcEEEecCcc
Confidence            888888887776555777776543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.93  E-value=0.0056  Score=40.94  Aligned_cols=78  Identities=13%  Similarity=0.253  Sum_probs=50.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChh--hHHHHHHHHHHHhC----CceEEEEEeeCCCHHHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE--RVDSAVQSLREEFG----EQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~--~~~~~~~~l~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .+.|.|++|.+|..++..|+.+|  .+++++++++.  ..+....++.....    ..++.....  .|.+         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~--~d~~---------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESD--ENLR---------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEET--TCGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCc--chHH---------
Confidence            47899999999999999999998  48999998753  33444445554221    112222111  1222         


Q ss_pred             HHhcCCccEEEEcccCCCC
Q 030706          154 QKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~~  172 (173)
                        ....-|++|.+||...+
T Consensus        71 --~l~~aDvVVitAG~~~~   87 (145)
T d1hyea1          71 --IIDESDVVIITSGVPRK   87 (145)
T ss_dssp             --GGTTCSEEEECCSCCCC
T ss_pred             --HhccceEEEEecccccC
Confidence              22368999999997654

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.91  E-value=0.0034  Score=42.80  Aligned_cols=80  Identities=16%  Similarity=0.203  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHH-HHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNE-VADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~  155 (173)
                      -.|.+++|.|+ ||+|...+..+...|+ +|+++++++++.+...     ..+...    .+|..+.+. +++..+..  
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-----~~GAd~----~in~~~~~~~~~~~~~~~--   94 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-----VFGATD----FVNPNDHSEPISQVLSKM--   94 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----HTTCCE----EECGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-----HcCCcE----EEcCCCcchhHHHHHHhh--
Confidence            45778999986 6788888888888775 7889999887754432     234322    224433322 23333222  


Q ss_pred             hcCCccEEEEcccC
Q 030706          156 NLKYVDIWVFMSDL  169 (173)
Q Consensus       156 ~~g~id~lVn~AG~  169 (173)
                      ..+.+|++|.+.|.
T Consensus        95 ~~~G~d~vid~~G~  108 (175)
T d1cdoa2          95 TNGGVDFSLECVGN  108 (175)
T ss_dssp             HTSCBSEEEECSCC
T ss_pred             ccCCcceeeeecCC
Confidence            22479999999874

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.91  E-value=0.0077  Score=40.90  Aligned_cols=79  Identities=13%  Similarity=0.128  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +...+.|.|+ |.+|..++..|+..|  .+++++|++++..+....++....  ..........|   .+          
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~----------   83 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YN----------   83 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GG----------
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hh----------
Confidence            3345777785 999999999999988  379999999887776666666421  11122222223   22          


Q ss_pred             HhcCCccEEEEcccCCCC
Q 030706          155 KNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~~~  172 (173)
                       ....-|++|..||....
T Consensus        84 -~~~~adivvitag~~~~  100 (159)
T d2ldxa1          84 -VSANSKLVIITAGARMV  100 (159)
T ss_dssp             -GGTTEEEEEECCSCCCC
T ss_pred             -hhccccEEEEecccccC
Confidence             22368999999987543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.88  E-value=0.0012  Score=45.09  Aligned_cols=78  Identities=23%  Similarity=0.257  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      -.|.+++|.|+ |++|...+..+...|++|+++++++++.+... +    .+...+    .|..+..++.      .+..
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~----lGa~~~----i~~~~~~~~~------~~~~   89 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-K----MGADHY----IATLEEGDWG------EKYF   89 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-H----HTCSEE----EEGGGTSCHH------HHSC
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-c----cCCcEE----eeccchHHHH------Hhhh
Confidence            35788999986 89999888777678999999999988765432 2    232222    1332222111      2234


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      +.+|.+|.+.|...
T Consensus        90 ~~~d~vi~~~~~~~  103 (168)
T d1piwa2          90 DTFDLIVVCASSLT  103 (168)
T ss_dssp             SCEEEEEECCSCST
T ss_pred             cccceEEEEecCCc
Confidence            57899999877543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.88  E-value=0.011  Score=40.22  Aligned_cols=80  Identities=14%  Similarity=0.175  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHH--hCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREE--FGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      .+.+.+.|.|+ |.+|..++..|+..|.  +++++|++++..+....++...  ...........|   .++        
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~~--------   85 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YSV--------   85 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GGG--------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hhh--------
Confidence            44567778886 8999999999999983  8999999988776666666542  111122222222   222        


Q ss_pred             HHhcCCccEEEEcccCCCC
Q 030706          154 QKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       154 ~~~~g~id~lVn~AG~~~~  172 (173)
                         ...-|++|..||....
T Consensus        86 ---~~~adiVVitAg~~~~  101 (160)
T d1i0za1          86 ---TANSKIVVVTAGVRQQ  101 (160)
T ss_dssp             ---GTTCSEEEECCSCCCC
T ss_pred             ---cccccEEEEecCCccc
Confidence               2367999999997643

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.86  E-value=0.0038  Score=41.87  Aligned_cols=75  Identities=15%  Similarity=0.162  Sum_probs=51.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      |.+.|.|+ |.+|..++..|+.+|  .++++.|.+++..+....++....  ..........   |.+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CHHHh----------
Confidence            56778895 899999999999988  489999999887766666665432  1112222222   33222          


Q ss_pred             cCCccEEEEcccCC
Q 030706          157 LKYVDIWVFMSDLH  170 (173)
Q Consensus       157 ~g~id~lVn~AG~~  170 (173)
                       ..-|++|..||..
T Consensus        68 -~~adiVVitaG~~   80 (146)
T d1hyha1          68 -ADADVVISTLGNI   80 (146)
T ss_dssp             -TTCSEEEECCSCG
T ss_pred             -ccccEEEEecccc
Confidence             2679999999964

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0018  Score=45.40  Aligned_cols=43  Identities=14%  Similarity=0.315  Sum_probs=36.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l  124 (173)
                      |++.|.|+ |-+|..+|..++..|++|++.|++++.++...+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i   47 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI   47 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH
Confidence            67888887 78999999999999999999999987766554443

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.80  E-value=0.00022  Score=50.84  Aligned_cols=42  Identities=29%  Similarity=0.433  Sum_probs=36.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      .+.||+++|-| .|.+|..+++.|.+.|++|++.+.+......
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            48999999987 6789999999999999999999988766544

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.76  E-value=0.003  Score=42.60  Aligned_cols=79  Identities=15%  Similarity=0.177  Sum_probs=46.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC----E---EEEE--ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGD----N---VIIC--SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~----~---V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .+.|+||+|.+|..++..|+..+.    .   +.++  +.+.+..+....++...... ....+...-.+.         
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------   75 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFP-LLAGLEATDDPK---------   75 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT-TEEEEEEESCHH---------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccc-cccccccCCchh---------
Confidence            689999999999999999998652    1   1222  23334444444444433222 233333332222         


Q ss_pred             HHHhcCCccEEEEcccCCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~~  172 (173)
                        +.+...|++|..||....
T Consensus        76 --~~~~~advViitaG~~~~   93 (154)
T d1y7ta1          76 --VAFKDADYALLVGAAPRK   93 (154)
T ss_dssp             --HHTTTCSEEEECCCCCCC
T ss_pred             --hhcccccEEEeecCcCCC
Confidence              223478999999998654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.74  E-value=0.001  Score=41.13  Aligned_cols=37  Identities=22%  Similarity=0.194  Sum_probs=32.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      ++||+++|.|. |.-|+++++.|.++|++|++.|.+..
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            78999999987 56799999999999999999998543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.72  E-value=0.0026  Score=43.86  Aligned_cols=50  Identities=28%  Similarity=0.495  Sum_probs=42.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG  129 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~  129 (173)
                      +++|.++|.|+ ||.+++++..|.+.| +|++..|+.++.++..+.+.....
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~   65 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN   65 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhc
Confidence            78999999986 688999999997766 999999999999888887766543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.70  E-value=0.0015  Score=44.78  Aligned_cols=44  Identities=20%  Similarity=0.291  Sum_probs=36.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS  123 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~  123 (173)
                      .+|.++|.|+ ||.+++++..|.+.|. +|.++.|+.++.+.+.+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~   60 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL   60 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh
Confidence            4678899986 8999999999999995 799999998877665544

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.68  E-value=0.0022  Score=40.93  Aligned_cols=38  Identities=21%  Similarity=0.268  Sum_probs=33.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      .++||.++|.|++ .+|..-++.|++.|++|++++....
T Consensus         9 ~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           9 QLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCC
Confidence            3789999999974 6999999999999999999886543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.53  E-value=0.01  Score=39.28  Aligned_cols=76  Identities=16%  Similarity=0.174  Sum_probs=50.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+.|.|+ |.+|..++..++..+  .++++.|.+++.++....++..... ..+......|   .++           +.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH-----------hc
Confidence            3566686 899999999999887  5899999998777665555554221 1123333322   222           23


Q ss_pred             CccEEEEcccCCCC
Q 030706          159 YVDIWVFMSDLHSS  172 (173)
Q Consensus       159 ~id~lVn~AG~~~~  172 (173)
                      .-|++|.+||....
T Consensus        67 ~adivvitag~~~~   80 (140)
T d1a5za1          67 GSDVVIVAAGVPQK   80 (140)
T ss_dssp             TCSEEEECCCCCCC
T ss_pred             CCCEEEEecccccC
Confidence            67999999997654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.51  E-value=0.0026  Score=44.32  Aligned_cols=43  Identities=9%  Similarity=0.190  Sum_probs=35.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l  124 (173)
                      |++.|.|+ |-||..+|..++..|++|++.+++++.+++..+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            45778887 78999999999999999999999987766654443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.47  E-value=0.014  Score=38.81  Aligned_cols=77  Identities=10%  Similarity=0.138  Sum_probs=49.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecCh--hhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSA--ERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~--~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.|+|++|.+|.+++..++.+|  .++++.|.+.  +..+....++..... ..+......|   .++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHH-----------
Confidence            47899999999999999999998  3799998643  333333444543211 1123333333   222           


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      ...-|++|..||....
T Consensus        68 ~~~aDiVvitaG~~~~   83 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQ   83 (142)
T ss_dssp             GTTCSEEEECCCCCCC
T ss_pred             hhhcCEEEEecccccc
Confidence            2368999999997653

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.45  E-value=0.016  Score=39.85  Aligned_cols=80  Identities=9%  Similarity=0.118  Sum_probs=47.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC---C----EEEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG---D----NVIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G---~----~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      -.+.||||+|.||+.++..|++..   .    .+.+.+...  ..++...-++...... ....+..- ++.        
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~-~~~~~~~~-~~~--------   94 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYP-LLREVSIG-IDP--------   94 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT-TEEEEEEE-SCH--------
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccc-cccCcccc-ccc--------
Confidence            469999999999999999998743   1    455555543  2334444444443221 12221111 121        


Q ss_pred             HHHHhcCCccEEEEcccCCCC
Q 030706          152 FAQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       152 ~~~~~~g~id~lVn~AG~~~~  172 (173)
                        .+.+...|++|..+|....
T Consensus        95 --~~~~~~aDvVvi~ag~~rk  113 (175)
T d7mdha1          95 --YEVFEDVDWALLIGAKPRG  113 (175)
T ss_dssp             --HHHTTTCSEEEECCCCCCC
T ss_pred             --hhhccCCceEEEeeccCCC
Confidence              1233478999999998654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.44  E-value=0.0039  Score=41.46  Aligned_cols=76  Identities=11%  Similarity=0.073  Sum_probs=49.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHH---hCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREE---FGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+.|+|+ |.+|..++..|+..|  .+++++|.+++..+.....+...   ... +......  .+.++           
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~-~~~i~~~--~~~~~-----------   66 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLF-DTKVTGS--NDYAD-----------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTC-CCEEEEE--SCGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcc-cceEEec--CCHHH-----------
Confidence            3667786 899999999999988  58999999887665544444321   121 2222222  22322           


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      +..-|++|..||....
T Consensus        67 ~~dadvvvitag~~~~   82 (142)
T d1guza1          67 TANSDIVIITAGLPRK   82 (142)
T ss_dssp             GTTCSEEEECCSCCCC
T ss_pred             hcCCeEEEEEEecCCC
Confidence            2367999999997543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.36  E-value=0.026  Score=37.38  Aligned_cols=76  Identities=17%  Similarity=0.251  Sum_probs=50.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHH--hCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREE--FGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .+.|.|+ |.+|.+++..++.+|  .+++++|.+++..+....++...  +.. .......  .+.++           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~-~~~i~~~--~~~~~-----------~   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYP-TVSIDGS--DDPEI-----------C   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGST-TCEEEEE--SCGGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCC-CceeecC--CCHHH-----------h
Confidence            4566686 999999999999998  48999999987776655556542  222 1122211  12221           1


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      ..-|++|..||....
T Consensus        68 ~daDvVVitaG~~~~   82 (143)
T d1llda1          68 RDADMVVITAGPRQK   82 (143)
T ss_dssp             TTCSEEEECCCCCCC
T ss_pred             hCCcEEEEecccccC
Confidence            257999999997653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.31  E-value=0.013  Score=39.05  Aligned_cols=77  Identities=16%  Similarity=0.139  Sum_probs=47.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      .+.|+||+|.+|.+++..|+..|  .+++++|.++...+  ...+.....   +.....-+. ..+..+.+       ..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~---~~~~~~~~~-~~~~~~~~-------~~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIET---RATVKGYLG-PEQLPDCL-------KG   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSS---SCEEEEEES-GGGHHHHH-------TT
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhh---hcCCCeEEc-CCChHHHh-------CC
Confidence            47899999999999999999988  37999998764322  223322111   111111121 22222222       36


Q ss_pred             ccEEEEcccCCC
Q 030706          160 VDIWVFMSDLHS  171 (173)
Q Consensus       160 id~lVn~AG~~~  171 (173)
                      -|++|..||...
T Consensus        69 aDivVitag~~~   80 (144)
T d1mlda1          69 CDVVVIPAGVPR   80 (144)
T ss_dssp             CSEEEECCSCCC
T ss_pred             CCEEEECCCcCC
Confidence            899999999754

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.28  E-value=0.015  Score=39.03  Aligned_cols=84  Identities=17%  Similarity=0.181  Sum_probs=53.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH-------HHHhCCceEEEEEeeCCCHHHHHHHH---HH
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL-------REEFGEQHVWGTKCDVSEGNEVADLV---AF  152 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l-------~~~~~~~~~~~~~~Dv~~~~~v~~~~---~~  152 (173)
                      +-|.| .|-+|..+|+.|++.|++|++.+|+++..++..+.-       .+...  +...+.+=|.+.+.++.++   +.
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~--~~d~ii~~v~~~~~v~~v~~~~~~   79 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAE--QCDVIITMLPNSPHVKEVALGENG   79 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHh--CCCeEEEEcCCHHHHHHHHhCCcc
Confidence            44454 588999999999999999999999988766654311       00000  1222334567788888876   33


Q ss_pred             HHHhcCCccEEEEcccC
Q 030706          153 AQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~  169 (173)
                      +.....+=+++|.+.-+
T Consensus        80 ~~~~~~~g~iiid~sT~   96 (161)
T d1vpda2          80 IIEGAKPGTVLIDMSSI   96 (161)
T ss_dssp             HHHHCCTTCEEEECSCC
T ss_pred             hhhccCCCCEEEECCCC
Confidence            45544445667766543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.25  E-value=0.034  Score=36.93  Aligned_cols=78  Identities=14%  Similarity=0.153  Sum_probs=48.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-C--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           82 NVLITGSTKGIGYALAKEFLKA-G--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~-G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+.|+|++|.+|.+++..|+.+ +  .++++.|..+ ..+....++...........+ ..-.+.+++           .
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~~~~~~~~~-----------~   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SGEDATPAL-----------E   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-CSSCCHHHH-----------T
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-EcCCCcccc-----------C
Confidence            4789999999999999988643 4  6899999864 344444455442111122221 222233221           2


Q ss_pred             CccEEEEcccCCCC
Q 030706          159 YVDIWVFMSDLHSS  172 (173)
Q Consensus       159 ~id~lVn~AG~~~~  172 (173)
                      .-|++|..||....
T Consensus        69 ~aDvvvitaG~~~k   82 (145)
T d2cmda1          69 GADVVLISAGVRRK   82 (145)
T ss_dssp             TCSEEEECCSCCCC
T ss_pred             CCCEEEECCCccCC
Confidence            57999999998653

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.15  E-value=0.0035  Score=41.91  Aligned_cols=34  Identities=18%  Similarity=0.350  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r  112 (173)
                      ++||.+||.|| |.+|..-++.|++.|++|++++.
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            78999999998 56999999999999999999865

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.12  E-value=0.0076  Score=40.51  Aligned_cols=77  Identities=10%  Similarity=0.152  Sum_probs=50.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHH--hCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREE--FGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..+.|.|+ |.+|..++..|...+ .+++++|++++..+....++...  ....+......|  +.+           ..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----------~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----------DL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----------cc
Confidence            35777785 899999998888877 68999999887766665555442  111122222222  222           22


Q ss_pred             CCccEEEEcccCCC
Q 030706          158 KYVDIWVFMSDLHS  171 (173)
Q Consensus       158 g~id~lVn~AG~~~  171 (173)
                      ..-|++|.+||...
T Consensus        70 ~~advvvitag~~~   83 (150)
T d1t2da1          70 AGADVVIVTAGFTK   83 (150)
T ss_dssp             TTCSEEEECCSCSS
T ss_pred             CCCcEEEEeccccc
Confidence            36899999999754

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.08  E-value=0.013  Score=38.89  Aligned_cols=77  Identities=14%  Similarity=0.056  Sum_probs=49.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .+.|.|+ |.+|..++..++.+|  .+++++|.+++..+....++....  ..........  .|.++           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~-----------~   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHH-----------h
Confidence            4566786 999999999999888  479999999877766555565421  1111222221  12221           2


Q ss_pred             CCccEEEEcccCCCC
Q 030706          158 KYVDIWVFMSDLHSS  172 (173)
Q Consensus       158 g~id~lVn~AG~~~~  172 (173)
                      ..-|++|..||....
T Consensus        68 ~~adiVvitag~~~~   82 (142)
T d1ojua1          68 KGSEIIVVTAGLARK   82 (142)
T ss_dssp             TTCSEEEECCCCCCC
T ss_pred             ccccEEEEeccccCC
Confidence            367899988886543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.02  E-value=0.0041  Score=40.42  Aligned_cols=57  Identities=12%  Similarity=0.137  Sum_probs=40.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      |.++|.|. |.+|+.+++.|.  |..|++++.+++..+...    ..    .+.++.+|.++++.+++
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~~----~~~~i~Gd~~~~~~L~~   57 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----RS----GANFVHGDPTRVSDLEK   57 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----HT----TCEEEESCTTSHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----hc----CccccccccCCHHHHHH
Confidence            56888875 689999999984  566888888877654332    11    25677789888877665

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.99  E-value=0.0054  Score=40.82  Aligned_cols=44  Identities=11%  Similarity=0.108  Sum_probs=34.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR  125 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~  125 (173)
                      +.+.|.|+ |.+|.+++..|+..+ ++++++|.+++..+.....+.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~   46 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLY   46 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhh
Confidence            45677786 999999999999888 689999998876665555553

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.97  E-value=0.0079  Score=39.99  Aligned_cols=76  Identities=12%  Similarity=0.097  Sum_probs=45.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCC-ceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .+.|.|+ |.+|..++..++..|  .+++++|++++..+....++...... ........   +.+           ...
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------HhC
Confidence            3556686 999999999999987  38999999887665555555532111 12222221   222           223


Q ss_pred             CccEEEEcccCCCC
Q 030706          159 YVDIWVFMSDLHSS  172 (173)
Q Consensus       159 ~id~lVn~AG~~~~  172 (173)
                      .-|++|..||....
T Consensus        68 ~adivvitag~~~~   81 (142)
T d1y6ja1          68 DCDVIVVTAGANRK   81 (142)
T ss_dssp             TCSEEEECCCC---
T ss_pred             CCceEEEecccccC
Confidence            67999999987643

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.89  E-value=0.022  Score=40.89  Aligned_cols=59  Identities=25%  Similarity=0.303  Sum_probs=43.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecC-------------------hhhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+++++|.| .||+|..++..|+..| .++.++|.+                   ..+.+.+.+.+.+..+..++..+.
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            6678999999 5789999999999999 588898753                   124555666676666654555444

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.018  Score=39.10  Aligned_cols=41  Identities=20%  Similarity=0.264  Sum_probs=35.9

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~  116 (173)
                      ..++.||+++|.|- |-||+.+|+.+...|++|++++.++..
T Consensus        19 ~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          19 DVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            35689999999985 589999999999999999999998743

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.74  E-value=0.043  Score=34.70  Aligned_cols=69  Identities=20%  Similarity=0.264  Sum_probs=48.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +.++.|.|| |-+|+-++....+.|+++++.+.+++.-..       ...   -.++..|..|.+.+.++....     .
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~-------~va---~~~i~~~~~d~~~l~~~~~~~-----~   74 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM-------HVA---HRSHVINMLDGDALRRVVELE-----K   74 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG-------GGS---SEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh-------hcC---CeEEECCCCCHHHHHHHHHhh-----C
Confidence            456888884 689999999999999999999987643110       011   134567888888888776553     4


Q ss_pred             ccEEE
Q 030706          160 VDIWV  164 (173)
Q Consensus       160 id~lV  164 (173)
                      +|++.
T Consensus        75 ~DviT   79 (111)
T d1kjqa2          75 PHYIV   79 (111)
T ss_dssp             CSEEE
T ss_pred             CceEE
Confidence            66654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.69  E-value=0.0078  Score=40.25  Aligned_cols=34  Identities=18%  Similarity=0.250  Sum_probs=30.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~  116 (173)
                      ++.|.|+ |.||..++..|++.|++|.+++|+++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            5788887 999999999999999999999997643

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.68  E-value=0.058  Score=36.48  Aligned_cols=80  Identities=15%  Similarity=0.086  Sum_probs=49.9

Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCC----------------ceEEEEEeeCCCHHHHHHHHH
Q 030706           88 STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE----------------QHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        88 a~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----------------~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      |.|-+|..+++.|++.|++|++.+|++++.+++.++.......                .....+..-+.+...+...+.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE   87 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence            5689999999999999999999999988877665542110000                011122233445555666666


Q ss_pred             HHHHhcCCccEEEEcc
Q 030706          152 FAQKNLKYVDIWVFMS  167 (173)
Q Consensus       152 ~~~~~~g~id~lVn~A  167 (173)
                      .....+..=+++|+..
T Consensus        88 ~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          88 QLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHCCTTCEEEECC
T ss_pred             hhhhhccccceecccC
Confidence            6655554445665543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.65  E-value=0.012  Score=41.60  Aligned_cols=36  Identities=31%  Similarity=0.346  Sum_probs=30.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      |-+.|.|+|.|| |-.|.++|..|+++|++|.++++.
T Consensus         3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           3 MHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            345577888886 578999999999999999999874

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.63  E-value=0.11  Score=34.56  Aligned_cols=85  Identities=18%  Similarity=0.020  Sum_probs=53.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHH----------HhCCceEEEEEeeCCCHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLRE----------EFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      |+++|.|. |-||.++++.|.+.|.  +|+..|++.+..+...+.-..          ......+.++   -+-.+.+..
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil---a~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML---SSPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE---CSCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc---cCCchhhhh
Confidence            56888875 8999999999999984  788999988766554332100          0001122222   234567788


Q ss_pred             HHHHHHHhcCCccEEEEcccC
Q 030706          149 LVAFAQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       149 ~~~~~~~~~g~id~lVn~AG~  169 (173)
                      +++++......=.+++..+++
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            888877766544555555443

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.38  E-value=0.046  Score=36.62  Aligned_cols=85  Identities=16%  Similarity=0.131  Sum_probs=51.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH-------HHHHhCCceEEEEEeeCCCHHHHHHHHHH--
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS-------LREEFGEQHVWGTKCDVSEGNEVADLVAF--  152 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~--  152 (173)
                      ++-+.| .|-+|.++|+.|++.|++|.+.+|+.+..+.....       ..+....  ...+..-+.+.+.++.++..  
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~--~diii~~v~~~~~~~~v~~~~~   79 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQG--ADVVISMLPASQHVEGLYLDDD   79 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTS--CSEEEECCSCHHHHHHHHHSTT
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccc--cCeeeecccchhhHHHHHhccc
Confidence            455665 58899999999999999999999998765554321       1111111  22333345666666666543  


Q ss_pred             -HHHhcCCccEEEEcccC
Q 030706          153 -AQKNLKYVDIWVFMSDL  169 (173)
Q Consensus       153 -~~~~~g~id~lVn~AG~  169 (173)
                       +.....+=+++|.+..+
T Consensus        80 ~~~~~l~~g~iiid~st~   97 (162)
T d3cuma2          80 GLLAHIAPGTLVLECSTI   97 (162)
T ss_dssp             CHHHHSCTTCEEEECSCC
T ss_pred             cccccCCCCCEEEECCCC
Confidence             33333333566655443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.34  E-value=0.02  Score=39.05  Aligned_cols=43  Identities=19%  Similarity=0.278  Sum_probs=37.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      .+.||+++|.|.+.-+|+-++..|.++|++|++++.......+
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~   76 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH   76 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHH
Confidence            4789999999999999999999999999999999876655443

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.22  E-value=0.015  Score=40.38  Aligned_cols=41  Identities=24%  Similarity=0.213  Sum_probs=33.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~  120 (173)
                      ..+.+.|.|+ |..|.++|..|++.|++|.+.+|+++..+..
T Consensus         6 ~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i   46 (189)
T d1n1ea2           6 YLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLV   46 (189)
T ss_dssp             CEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHH
T ss_pred             eeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHH
Confidence            3346778876 5799999999999999999999988766544

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.20  E-value=0.054  Score=36.08  Aligned_cols=79  Identities=14%  Similarity=0.213  Sum_probs=45.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-------EEEEEecChh--hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSAE--RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF  152 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~-------~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~  152 (173)
                      .+.|+||+|.+|.+++..|+..+-       .+++.+.+..  .++....++...... ....+..  .+..        
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~-~~~~~~~--~~~~--------   73 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LLKDVIA--TDKE--------   73 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TEEEEEE--ESCH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccc-ccccccc--Cccc--------
Confidence            689999999999999999987541       3556665432  233333333332111 1222221  1111        


Q ss_pred             HHHhcCCccEEEEcccCCCC
Q 030706          153 AQKNLKYVDIWVFMSDLHSS  172 (173)
Q Consensus       153 ~~~~~g~id~lVn~AG~~~~  172 (173)
                       .+.+...|++|..+|...+
T Consensus        74 -~~~~~~~dvVVitag~~~~   92 (154)
T d5mdha1          74 -EIAFKDLDVAILVGSMPRR   92 (154)
T ss_dssp             -HHHTTTCSEEEECCSCCCC
T ss_pred             -ccccCCceEEEEecccCCC
Confidence             1223478999999997654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.17  E-value=0.04  Score=39.48  Aligned_cols=45  Identities=22%  Similarity=0.333  Sum_probs=37.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~  122 (173)
                      .+.||+++|-| .|.+|..+++.|.+.|++|++++.+....+....
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~   80 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA   80 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH
Confidence            48899999987 5789999999999999999999988766655443

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.11  E-value=0.018  Score=40.29  Aligned_cols=38  Identities=18%  Similarity=0.138  Sum_probs=33.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      .+.||++.|.|- |.||+.+++.+...|.+|+..++...
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            378999999985 78999999999999999999987543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.019  Score=39.29  Aligned_cols=42  Identities=17%  Similarity=0.331  Sum_probs=37.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~  118 (173)
                      .+.||+++|.|.+.-+|+-++..|.++|++|++++.......
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            489999999999999999999999999999999988665543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.84  E-value=0.014  Score=45.71  Aligned_cols=80  Identities=19%  Similarity=0.253  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK  137 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (173)
                      +.+..++|.|+ ||||-.+++.|+..|. ++.++|.+.                   .+.+.+.+.+....+..++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            45667899987 6899999999999995 788887531                   23445566666666655566666


Q ss_pred             eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      .++.+..  ..+       +.+.|+||++.
T Consensus       114 ~~i~~~~--~~~-------~~~~DlVi~~~  134 (426)
T d1yovb1         114 NKIQDFN--DTF-------YRQFHIIVCGL  134 (426)
T ss_dssp             SCGGGBC--HHH-------HTTCSEEEECC
T ss_pred             ccccchH--HHH-------HHhcchheecc
Confidence            5554432  122       23678888754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.82  E-value=0.035  Score=36.77  Aligned_cols=41  Identities=27%  Similarity=0.410  Sum_probs=33.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQS  123 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~  123 (173)
                      ++.+.|+ |-+|.++++.|.+.| ++|++.+|+++..+...++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            3556665 899999999999887 8999999998877665554

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=94.81  E-value=0.084  Score=38.64  Aligned_cols=77  Identities=16%  Similarity=0.129  Sum_probs=51.2

Q ss_pred             CEEEEEcCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItGa~-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      +.++-.|++ |.|+.++++   ...++|+.+|.+++..+-+.+..+...-..++.+...|+.+.         ..+.+++
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            455545544 445555442   246899999999988877777766654444677777787543         2234578


Q ss_pred             ccEEEEcccC
Q 030706          160 VDIWVFMSDL  169 (173)
Q Consensus       160 id~lVn~AG~  169 (173)
                      +|++|.|-=+
T Consensus       180 fDlIVsNPPY  189 (271)
T d1nv8a_         180 IEMILSNPPY  189 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             ccEEEEcccc
Confidence            9999999644

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.68  E-value=0.19  Score=32.75  Aligned_cols=77  Identities=13%  Similarity=0.135  Sum_probs=52.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEE-EecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           82 NVLITGSTKGIGYALAKEFLKA-GDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~-G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      .+.|.|++|-+|+++++.+.+. +.+++. +++.. ...    .+... .. .   +..|++.++.+.+.++.+.+.  +
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~----~~~~~-~~-D---vvIDFS~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLS----LLTDG-NT-E---VVIDFTHPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTH----HHHTT-TC-S---EEEECCCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chh----hhccc-cC-C---EEEEcccHHHHHHHHHHHHhc--C
Confidence            4789999999999999988775 566654 44432 221    11111 11 2   346999999999999888765  5


Q ss_pred             ccEEEEcccCC
Q 030706          160 VDIWVFMSDLH  170 (173)
Q Consensus       160 id~lVn~AG~~  170 (173)
                      +-+||-..|+.
T Consensus        69 ~~~ViGTTG~~   79 (135)
T d1yl7a1          69 IHAVVGTTGFT   79 (135)
T ss_dssp             CEEEECCCCCC
T ss_pred             CCEEEeccccc
Confidence            66777666654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.68  E-value=0.071  Score=34.51  Aligned_cols=74  Identities=15%  Similarity=0.211  Sum_probs=53.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      .+.|.|++|-+|+++++.+.+.|..++.. +.+....          .....   +..|++.++.+.+.++.+.+.  ++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~----------~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~   66 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE----------LDSPD---VVIDFSSPEALPKTVDLCKKY--RA   66 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE----------CSCCS---EEEECSCGGGHHHHHHHHHHH--TC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH----------hccCC---EEEEecCHHHHHHHHHHHHhc--CC
Confidence            48899999999999999888899887643 4432210          01112   346999999999999988776  56


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      .+|+-..|+.
T Consensus        67 p~ViGTTG~~   76 (128)
T d1vm6a3          67 GLVLGTTALK   76 (128)
T ss_dssp             EEEECCCSCC
T ss_pred             CEEEEcCCCC
Confidence            6777666653

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.67  E-value=0.085  Score=37.22  Aligned_cols=80  Identities=24%  Similarity=0.216  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      ++.++|..|+++|--.++.-.++  |.+|+.++++++-.+...+.+...+- .++.++..|..+-          ....+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~-~nv~~~~gd~~~g----------~~~~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGV-KNVHVILGDGSKG----------FPPKA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGGC----------CGGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCC-ceeEEEECccccC----------CcccC
Confidence            56789999987777666666665  56799999998777776666666543 4799999987531          12336


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      +.|.++.++++..
T Consensus       145 pfD~Iiv~~a~~~  157 (215)
T d1jg1a_         145 PYDVIIVTAGAPK  157 (215)
T ss_dssp             CEEEEEECSBBSS
T ss_pred             cceeEEeeccccc
Confidence            8999998888754

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.65  E-value=0.16  Score=34.67  Aligned_cols=80  Identities=9%  Similarity=0.035  Sum_probs=53.7

Q ss_pred             CCCCEEE-EEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVL-ITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~l-ItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      .+|+.+| +-.|+|++|.+    .+.+|+ .|+.++.+.+..+...+.+.......++.++..|+      .+++++...
T Consensus        40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~------~~~l~~~~~  109 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDA------NRALEQFYE  109 (182)
T ss_dssp             CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH------HHHHHHHHH
T ss_pred             cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccc------hhhhhhhcc
Confidence            5677766 44567778875    455786 69999999888777777666544444677777775      344555444


Q ss_pred             hcCCccEEEEcc
Q 030706          156 NLKYVDIWVFMS  167 (173)
Q Consensus       156 ~~g~id~lVn~A  167 (173)
                      ...+.|+++...
T Consensus       110 ~~~~fDlIflDP  121 (182)
T d2fhpa1         110 EKLQFDLVLLDP  121 (182)
T ss_dssp             TTCCEEEEEECC
T ss_pred             cCCCcceEEech
Confidence            545788887653

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.63  E-value=0.33  Score=32.73  Aligned_cols=77  Identities=26%  Similarity=0.227  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      +.-+++|.|+ |--|+.-++.....|+.|.+.|.+.+.+++....    ++. ++..   -..+.+.+++.+.       
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~----~~~-~~~~---~~~~~~~l~~~~~-------   94 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETL----FGS-RVEL---LYSNSAEIETAVA-------   94 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HGG-GSEE---EECCHHHHHHHHH-------
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHh----hcc-ccee---ehhhhhhHHHhhc-------
Confidence            3457888886 5678888999999999999999998876654433    332 2222   2445655554443       


Q ss_pred             CccEEEEcccCCC
Q 030706          159 YVDIWVFMSDLHS  171 (173)
Q Consensus       159 ~id~lVn~AG~~~  171 (173)
                      .-|+||.++=+-.
T Consensus        95 ~aDivI~aalipG  107 (168)
T d1pjca1          95 EADLLIGAVLVPG  107 (168)
T ss_dssp             TCSEEEECCCCTT
T ss_pred             cCcEEEEeeecCC
Confidence            5799999876543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.62  E-value=0.058  Score=37.15  Aligned_cols=38  Identities=16%  Similarity=0.111  Sum_probs=32.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      ..+.++++.|.|. |.||+++++.+...|.+|+..++..
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          40 YDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             eeccccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            3478999999984 6899999999999999999999754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.54  E-value=0.042  Score=35.13  Aligned_cols=35  Identities=34%  Similarity=0.416  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+|.++|.|| |.+|..+|..|.+.|.+|.++.+.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4578888865 6999999999999999999998754

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.54  E-value=0.042  Score=35.10  Aligned_cols=35  Identities=31%  Similarity=0.406  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+|.++|.|| |.+|..+|..|.+.|.+|.++.+.+
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            3578888875 6999999999999999999998865

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.53  E-value=0.11  Score=36.41  Aligned_cols=81  Identities=15%  Similarity=0.049  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      +|.++|-.|++.|--.++..++...+.+|+.++.+++..+...+.+....- .++.++..|..+..          ...+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~-~n~~~~~~d~~~~~----------~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI-ENVIFVCGDGYYGV----------PEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcc-cccccccCchHHcc----------cccc
Confidence            567899888766654444444444456899999999888877777765433 35777776654311          1225


Q ss_pred             CccEEEEcccCC
Q 030706          159 YVDIWVFMSDLH  170 (173)
Q Consensus       159 ~id~lVn~AG~~  170 (173)
                      .+|.++.++++.
T Consensus       144 ~fD~I~~~~~~~  155 (213)
T d1dl5a1         144 PYDVIFVTVGVD  155 (213)
T ss_dssp             CEEEEEECSBBS
T ss_pred             chhhhhhhccHH
Confidence            789988887654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.51  E-value=0.047  Score=37.59  Aligned_cols=38  Identities=18%  Similarity=0.161  Sum_probs=32.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      .+.+|++.|.| .|.||+.+++.+...|.+|+..++...
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~   78 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVS   78 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCC
Confidence            47789999988 579999999999999999999988654

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.38  E-value=0.29  Score=33.10  Aligned_cols=75  Identities=19%  Similarity=0.112  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCch-HHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKG-IGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ++.++|=.|++.| ++    ..+++.+.+|+.++.+++..+...+.++..+-..++.++..|..+          .....
T Consensus        33 ~g~~VLDiGcGsG~~s----~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~   98 (186)
T d1l3ia_          33 KNDVAVDVGCGTGGVT----LELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKI   98 (186)
T ss_dssp             TTCEEEEESCTTSHHH----HHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTS
T ss_pred             CCCEEEEEECCeEccc----ccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------ccccc
Confidence            4667777786554 44    445667789999999999888888777765433468888877411          11223


Q ss_pred             CCccEEEEcc
Q 030706          158 KYVDIWVFMS  167 (173)
Q Consensus       158 g~id~lVn~A  167 (173)
                      ..+|.+|.+.
T Consensus        99 ~~~D~v~~~~  108 (186)
T d1l3ia_          99 PDIDIAVVGG  108 (186)
T ss_dssp             CCEEEEEESC
T ss_pred             CCcCEEEEeC
Confidence            4667766554

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.31  E-value=0.017  Score=39.92  Aligned_cols=37  Identities=24%  Similarity=0.272  Sum_probs=32.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+.||++.|.|. |.||+.+++.+...|.+|+..++..
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccCceEEEecc-ccccccceeeeeccccccccccccc
Confidence            378999999986 5699999999999999999999864

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.26  E-value=0.11  Score=38.23  Aligned_cols=74  Identities=24%  Similarity=0.168  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .++|+||-.|++.|+   ++..+++.|+ +|+.++.++.. ....+...+.....++.++..|+.+...          .
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~   99 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------P   99 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------c
Confidence            578999999987765   4556777886 79999987643 3344444444444568888888765431          1


Q ss_pred             cCCccEEEE
Q 030706          157 LKYVDIWVF  165 (173)
Q Consensus       157 ~g~id~lVn  165 (173)
                      ..++|+||.
T Consensus       100 ~~~~D~Ivs  108 (311)
T d2fyta1         100 VEKVDVIIS  108 (311)
T ss_dssp             CSCEEEEEE
T ss_pred             cccceEEEE
Confidence            236787775

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.22  E-value=0.052  Score=34.21  Aligned_cols=34  Identities=24%  Similarity=0.401  Sum_probs=29.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      |.++|.|| |.+|..+|..|.+.|.+|.++.+.+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            67888876 68999999999999999999988653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.19  E-value=0.08  Score=35.76  Aligned_cols=41  Identities=20%  Similarity=0.195  Sum_probs=36.1

Q ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (173)
Q Consensus        75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~  116 (173)
                      ..++.||+++|.|- |-+|+.+|..+...|++|+++..++-.
T Consensus        18 ~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          18 DFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             CceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            35689999999985 689999999999999999999998743

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=94.09  E-value=0.076  Score=36.79  Aligned_cols=80  Identities=19%  Similarity=0.115  Sum_probs=56.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI  162 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  162 (173)
                      +=+|-|+||...++.+.+ . +.+|+.+|++++.++...+.+... +. ++.++..+..+...   ++...  ..+.+|+
T Consensus        28 lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~-~~-r~~~~~~~f~~~~~---~~~~~--~~~~vdg   98 (192)
T d1m6ya2          28 LDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF-SD-RVSLFKVSYREADF---LLKTL--GIEKVDG   98 (192)
T ss_dssp             EETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG-TT-TEEEEECCGGGHHH---HHHHT--TCSCEEE
T ss_pred             EEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc-cc-cccchhHHHhhHHH---HHHHc--CCCCcce
Confidence            336888899988888876 3 468999999998887776666543 33 68888888765433   22221  2368999


Q ss_pred             EEEcccCCC
Q 030706          163 WVFMSDLHS  171 (173)
Q Consensus       163 lVn~AG~~~  171 (173)
                      ++..-|+.+
T Consensus        99 Il~DlGvSs  107 (192)
T d1m6ya2          99 ILMDLGVST  107 (192)
T ss_dssp             EEEECSCCH
T ss_pred             eeeccchhH
Confidence            999888753

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.04  E-value=0.044  Score=38.11  Aligned_cols=38  Identities=21%  Similarity=0.132  Sum_probs=33.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      ..+.||++.|.|. |.||+.+++.+...|.+|+..++..
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCcc
Confidence            3488999999975 7899999999999999999998754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.98  E-value=0.11  Score=32.92  Aligned_cols=33  Identities=18%  Similarity=0.319  Sum_probs=28.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      |.++|.|| |-||..+|..|.+.|.+|.++.+.+
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            67888875 6899999999999999999998754

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.91  E-value=0.048  Score=37.26  Aligned_cols=37  Identities=16%  Similarity=0.180  Sum_probs=34.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      .+.||+++|.|-+.=+|+-++..|+++|++|..++..
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            5899999999999999999999999999999988764

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.87  E-value=0.04  Score=39.08  Aligned_cols=34  Identities=24%  Similarity=0.225  Sum_probs=28.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      +|.|+|.|| |-=|+..|..|++.|++|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578888886 4568899999999999999998754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.83  E-value=0.15  Score=31.92  Aligned_cols=33  Identities=18%  Similarity=0.149  Sum_probs=28.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      |.++|.|| |.+|..+|..|.+.|.+|.++.+.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            56777775 6899999999999999999998854

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.80  E-value=0.054  Score=34.49  Aligned_cols=34  Identities=32%  Similarity=0.401  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      +|.++|.|| |.+|..+|..|.+.|.+|.++.+.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            467888875 6999999999999999999998864

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.77  E-value=0.057  Score=34.54  Aligned_cols=33  Identities=18%  Similarity=0.176  Sum_probs=29.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      |.++|.|| |.||..+|..|.+.|.+|.++.|.+
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            67888886 5899999999999999999999864

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.72  E-value=0.2  Score=34.71  Aligned_cols=74  Identities=28%  Similarity=0.217  Sum_probs=50.2

Q ss_pred             CCCCCCEEEEEcCCch-HHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKG-IGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA  153 (173)
Q Consensus        76 ~~~~~k~~lItGa~~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~  153 (173)
                      ..++|+++|=.|++.| ++.+    ++..|+ +|+.++.++...+...+.+.....  +..++..|+.+.          
T Consensus        43 ~dl~g~~vLDlg~GtG~l~i~----a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~--~~~~~~~d~~~~----------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGVLSYG----ALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEF----------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGC----------
T ss_pred             CCCCCCEEEECcCcchHHHHH----HHHcCCCEEEEEcCcHHHHHHHHHHHHHcCC--CceEEECchhhh----------
Confidence            3478999998886544 5443    445674 899999998887777666554322  567777776432          


Q ss_pred             HHhcCCccEEEEccc
Q 030706          154 QKNLKYVDIWVFMSD  168 (173)
Q Consensus       154 ~~~~g~id~lVn~AG  168 (173)
                         .+++|++|.|.-
T Consensus       107 ---~~~fD~Vi~nPP  118 (201)
T d1wy7a1         107 ---NSRVDIVIMNPP  118 (201)
T ss_dssp             ---CCCCSEEEECCC
T ss_pred             ---CCcCcEEEEcCc
Confidence               357898888754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.61  E-value=0.11  Score=35.46  Aligned_cols=36  Identities=19%  Similarity=0.294  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      ..+|.++|.|| |--|++.|..|+++|++|.+..+.+
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            45688999986 5789999999999999999999864

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.52  E-value=0.08  Score=36.64  Aligned_cols=38  Identities=24%  Similarity=0.113  Sum_probs=32.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      .+.||++.|.|. |.||+.+++.+...|.+|+..++...
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            478999999985 68999999999999999999987543

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.49  E-value=0.088  Score=34.67  Aligned_cols=36  Identities=28%  Similarity=0.236  Sum_probs=29.3

Q ss_pred             CCCEEEEE-cCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           79 PPYNVLIT-GSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        79 ~~k~~lIt-Ga~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .++.++|. .+++.||.++|..|++.|.+|.++.+.+
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            45555555 4668899999999999999999998864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.41  E-value=0.1  Score=33.20  Aligned_cols=32  Identities=22%  Similarity=0.229  Sum_probs=27.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      +.++|.|| |-||..+|..|.+.|.+|.++.++
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45777765 699999999999999999999875

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=93.35  E-value=0.36  Score=34.70  Aligned_cols=57  Identities=18%  Similarity=0.061  Sum_probs=40.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEee
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD  139 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D  139 (173)
                      .+|+.+|=.|++.|+   ++..+++.|++|+.+|.++...+.+.+..+..+-  ++.++..|
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~--~~~~~~~d  175 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGV--RPRFLEGS  175 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTC--CCEEEESC
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCC--ceeEEecc
Confidence            468899999988775   2335667899999999999888877766654433  24455554

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.32  E-value=0.093  Score=33.19  Aligned_cols=34  Identities=21%  Similarity=0.338  Sum_probs=29.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+.++|.|| |.||..+|..|++.|.+|.++.+..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            367888875 6999999999999999999998754

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.31  E-value=0.078  Score=33.56  Aligned_cols=34  Identities=24%  Similarity=0.235  Sum_probs=29.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .|.++|.|| |.+|..+|..|...|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            367888875 6899999999999999999999854

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.31  E-value=0.09  Score=33.08  Aligned_cols=35  Identities=17%  Similarity=0.302  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+|.++|.|| |-+|..+|..|.+.|.+|.++.+.+
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            4688888875 6899999999999999999998854

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.28  E-value=0.58  Score=30.52  Aligned_cols=77  Identities=9%  Similarity=0.022  Sum_probs=50.6

Q ss_pred             CCCCEEEEEc-CCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLITG-STKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lItG-a~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ++|+.+|=.| |+|.+|.+    .+.+|+ +|+.++.+++..+...+.++......++.+++.|+.      ..+   ..
T Consensus        13 ~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~------~~l---~~   79 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAE------RAI---DC   79 (152)
T ss_dssp             CCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHH------HHH---HH
T ss_pred             CCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccccc------ccc---cc
Confidence            6788887666 45666664    455775 899999998887777776665544446888887742      222   22


Q ss_pred             hcCCccEEEEcc
Q 030706          156 NLKYVDIWVFMS  167 (173)
Q Consensus       156 ~~g~id~lVn~A  167 (173)
                      ..++.|+++.+.
T Consensus        80 ~~~~fDiIf~DP   91 (152)
T d2esra1          80 LTGRFDLVFLDP   91 (152)
T ss_dssp             BCSCEEEEEECC
T ss_pred             cccccceeEech
Confidence            235788887653

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.25  E-value=0.052  Score=36.73  Aligned_cols=34  Identities=12%  Similarity=0.214  Sum_probs=27.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA  114 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~  114 (173)
                      +|.++|.|| |-.|...|..|++.|+ .|.++.+..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            466777775 6889999999999998 488888754

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=93.12  E-value=0.18  Score=36.31  Aligned_cols=64  Identities=14%  Similarity=0.280  Sum_probs=45.7

Q ss_pred             CCCCEEEEEcCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           78 LPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        78 ~~~k~~lItGa~-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      -+|.++|=.|++ |++...+++.+.. +.+|+.++++++..+.+.+.+.......++.+...|+.+
T Consensus        84 ~pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~  148 (250)
T d1yb2a1          84 RPGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD  148 (250)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT
T ss_pred             CCcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeec
Confidence            367788888865 5566666666544 358999999998888888877765444467777777654

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.09  E-value=0.59  Score=34.56  Aligned_cols=78  Identities=15%  Similarity=-0.015  Sum_probs=52.7

Q ss_pred             CCCEEEEEc-CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           79 PPYNVLITG-STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        79 ~~k~~lItG-a~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +++.+|=.. ++|+++.+    ++..|++|+.++.+...++...+.+...+- ..++.++..|+      .+.+++..+.
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHhhc
Confidence            366676444 55655554    455789999999999888777776665432 23578887775      4455555555


Q ss_pred             cCCccEEEEc
Q 030706          157 LKYVDIWVFM  166 (173)
Q Consensus       157 ~g~id~lVn~  166 (173)
                      ..+.|+||.+
T Consensus       202 ~~~fD~IilD  211 (309)
T d2igta1         202 GSTYDIILTD  211 (309)
T ss_dssp             TCCBSEEEEC
T ss_pred             CCCCCEEEEC
Confidence            6789999975

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.06  E-value=0.082  Score=33.16  Aligned_cols=33  Identities=21%  Similarity=0.376  Sum_probs=28.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      |.++|.|| |.+|..+|..|.+.|.+|.++.+.+
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            56777765 7999999999999999999998753

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.05  E-value=0.071  Score=35.31  Aligned_cols=41  Identities=22%  Similarity=0.280  Sum_probs=33.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l  124 (173)
                      +.+. |.|-+|.++++.|.+.|++|++.+|+.++.++..+++
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            4444 5678999999999999999999999988776665543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.04  E-value=0.053  Score=38.74  Aligned_cols=31  Identities=23%  Similarity=0.305  Sum_probs=26.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      ++|.|| |-.|.++|.+|+++|.+|+++++..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677775 6889999999999999999999753

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.01  E-value=0.092  Score=36.56  Aligned_cols=70  Identities=24%  Similarity=0.260  Sum_probs=46.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..+.||++|=.|++.|+   ++..++..|+ +|+.++.+++..+...+.    ..  ++.++..|+.+.           
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N----~~--~~~~~~~D~~~l-----------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN----CG--GVNFMVADVSEI-----------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH----CT--TSEEEECCGGGC-----------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc----cc--cccEEEEehhhc-----------
Confidence            34789999999977663   2234666774 799999988765543332    22  466778887432           


Q ss_pred             HhcCCccEEEEcc
Q 030706          155 KNLKYVDIWVFMS  167 (173)
Q Consensus       155 ~~~g~id~lVn~A  167 (173)
                        .+++|+||.|.
T Consensus       105 --~~~fD~Vi~NP  115 (197)
T d1ne2a_         105 --SGKYDTWIMNP  115 (197)
T ss_dssp             --CCCEEEEEECC
T ss_pred             --CCcceEEEeCc
Confidence              25788888774

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.97  E-value=0.071  Score=36.97  Aligned_cols=36  Identities=22%  Similarity=0.196  Sum_probs=29.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      +.|. |.|-+|..+|..|++.|++|++.|.+.+..+.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~   38 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            4455 56899999999999999999999998765443

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.90  E-value=0.4  Score=32.80  Aligned_cols=40  Identities=20%  Similarity=0.218  Sum_probs=32.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~  120 (173)
                      .-.++|.|+ |-.|+.-++.....|+.|.+.|.+.+..++.
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l   68 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV   68 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHH
Confidence            346788876 5788888888889999999999988776544

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.88  E-value=0.35  Score=35.87  Aligned_cols=80  Identities=18%  Similarity=0.062  Sum_probs=53.7

Q ss_pred             CCCCEEEEEc-CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITG-STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItG-a~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      ..|+.+|=.+ ++|+++.+    ++..|.+|+.++.++..++...+.+...+- .++.++..|+      ..+.+...+.
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl-~~~~~i~~d~------~~~~~~~~~~  212 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGL-GNVRVLEANA------FDLLRRLEKE  212 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTC-TTEEEEESCH------HHHHHHHHHT
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCC-CCcceeeccH------HHHhhhhHhh
Confidence            4677888666 45655544    344567999999999888877777765543 3577888775      2333344444


Q ss_pred             cCCccEEEEccc
Q 030706          157 LKYVDIWVFMSD  168 (173)
Q Consensus       157 ~g~id~lVn~AG  168 (173)
                      .+++|+||.+.-
T Consensus       213 ~~~fD~Vi~DpP  224 (318)
T d1wxxa2         213 GERFDLVVLDPP  224 (318)
T ss_dssp             TCCEEEEEECCC
T ss_pred             hcCCCEEEEcCC
Confidence            568999998754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.84  E-value=0.24  Score=31.58  Aligned_cols=34  Identities=21%  Similarity=0.338  Sum_probs=29.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+.++|.|| |-||..+|..|.+.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            367888875 6999999999999999999998754

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.76  E-value=0.32  Score=32.83  Aligned_cols=32  Identities=28%  Similarity=0.382  Sum_probs=27.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+.|.|+ |..|.++|..|++.|.+|.+.+|..
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~   33 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEF   33 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecc
Confidence            4566665 7899999999999999999998854

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.68  E-value=0.12  Score=33.35  Aligned_cols=35  Identities=23%  Similarity=0.320  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+|.++|.|| |.+|..+|..|.+.|.+|.++.+.+
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            4578888875 6999999999999999999998754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.63  E-value=0.077  Score=33.82  Aligned_cols=34  Identities=18%  Similarity=0.406  Sum_probs=29.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .|.++|.|| |-||..+|..|.+.|.+|.++.|.+
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            367888875 6999999999999999999998854

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.32  E-value=0.11  Score=34.11  Aligned_cols=34  Identities=15%  Similarity=0.114  Sum_probs=27.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~  117 (173)
                      +-|. |.|-+|.++++.|.+.|+.|+..++.....
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~   36 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPS   36 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHH
Confidence            3444 458999999999999999999888765443

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.29  E-value=0.22  Score=34.86  Aligned_cols=36  Identities=22%  Similarity=0.299  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      -.+|.++|.|| |--|...|..|+++|++|.++.+..
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            45788999986 5678999999999999999998754

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=92.28  E-value=0.43  Score=34.70  Aligned_cols=76  Identities=18%  Similarity=0.093  Sum_probs=53.0

Q ss_pred             CEEEEEc-CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           81 YNVLITG-STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        81 k~~lItG-a~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      ..++=.| |+|.||.+++..+  ...+|+.+|.++..++-+.+......- .++.+++.|+.+.-           ..++
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~-~~v~~~~~d~~~~~-----------~~~~  175 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSAL-----------AGQQ  175 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCSTTGGG-----------TTCC
T ss_pred             cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCc-ccceeeeccccccc-----------CCCc
Confidence            3455555 5677777776654  347999999999888777777665544 36899999975431           1248


Q ss_pred             ccEEEEcccCC
Q 030706          160 VDIWVFMSDLH  170 (173)
Q Consensus       160 id~lVn~AG~~  170 (173)
                      +|++|.|.=+.
T Consensus       176 fDlIvsNPPYi  186 (274)
T d2b3ta1         176 FAMIVSNPPYI  186 (274)
T ss_dssp             EEEEEECCCCB
T ss_pred             eeEEEecchhh
Confidence            99999996543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.22  E-value=0.79  Score=33.85  Aligned_cols=81  Identities=21%  Similarity=0.097  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-CchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           79 PPYNVLITGS-TKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        79 ~~k~~lItGa-~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +|+++|=.++ +|+++..+    +..|+ +|+.++.++..++...+.+...+-..++.++..|+      ..........
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~------~~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSA------FEEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH------HHHHHHHHHT
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechh------hhhhHHHHhc
Confidence            4778886664 45555543    45675 79999999988887777776654434677777775      2333444445


Q ss_pred             cCCccEEEEcccC
Q 030706          157 LKYVDIWVFMSDL  169 (173)
Q Consensus       157 ~g~id~lVn~AG~  169 (173)
                      ..++|+||.+.-.
T Consensus       215 ~~~fD~Vi~DpP~  227 (324)
T d2as0a2         215 GEKFDIVVLDPPA  227 (324)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             cCCCCchhcCCcc
Confidence            5689999987643

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.22  E-value=0.1  Score=37.62  Aligned_cols=35  Identities=29%  Similarity=0.365  Sum_probs=29.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      ..|.|+|.|| |--|+..|..|++.|++|.++.+.+
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3467888886 4668999999999999999998764

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.17  E-value=0.35  Score=35.61  Aligned_cols=62  Identities=32%  Similarity=0.187  Sum_probs=41.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG  143 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~  143 (173)
                      .+||+||-.|++.|+   ++..+++.|+ +|+.++.++. .....+.........++.++..|+.+.
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~   94 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEV   94 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHc
Confidence            468999999987765   4556777885 7999998753 444444444433334678888777654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.12  E-value=0.12  Score=33.90  Aligned_cols=35  Identities=20%  Similarity=0.142  Sum_probs=29.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecCh
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSA  114 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~  114 (173)
                      .||.++|.|| |-.|..+|..|.+.|  .+|+++++.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4789999987 578999999999987  4788887654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.11  E-value=0.14  Score=36.02  Aligned_cols=34  Identities=24%  Similarity=0.256  Sum_probs=28.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+.|+|.|| |--|..+|..|+++|.+|+++.++.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            456788876 5678899999999999999999854

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.00  E-value=0.28  Score=32.19  Aligned_cols=85  Identities=15%  Similarity=0.147  Sum_probs=50.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCC----ceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE----QHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      +-+.| .|-+|..+++.|++.|+.+ +.+|+.++..+..++.......    .....+...+.+.+.+....+.+.....
T Consensus         3 Ig~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            33445 4889999999999888755 5677766655554433211000    0122223455667777777777766655


Q ss_pred             CccEEEEcccC
Q 030706          159 YVDIWVFMSDL  169 (173)
Q Consensus       159 ~id~lVn~AG~  169 (173)
                      +-.++|.+.-+
T Consensus        81 ~~~~iid~sT~   91 (156)
T d2cvza2          81 EGTYWVDATSG   91 (156)
T ss_dssp             TTEEEEECSCC
T ss_pred             ccccccccccC
Confidence            56666665543

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=91.89  E-value=0.045  Score=37.65  Aligned_cols=31  Identities=19%  Similarity=0.223  Sum_probs=26.4

Q ss_pred             CEEEEEcCCchHHHH-----HHHHHHHcCCEEEEEe
Q 030706           81 YNVLITGSTKGIGYA-----LAKEFLKAGDNVIICS  111 (173)
Q Consensus        81 k~~lItGa~~gIG~a-----ia~~l~~~G~~V~~~~  111 (173)
                      |.++|||.+.|.|+.     ++..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999998888865     4678899999999986

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.83  E-value=1.1  Score=29.54  Aligned_cols=43  Identities=19%  Similarity=0.166  Sum_probs=29.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEe--cChhhHHHHHHH
Q 030706           81 YNVLITGSTKGIGYALAKEFLKA--GDNVIICS--RSAERVDSAVQS  123 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~  123 (173)
                      |.+.|.|++|.||.....-+.+.  .++|+.+.  ++-+.+.+...+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~   48 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLE   48 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHH
Confidence            67999999999999998877775  36776654  333444443333

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=91.66  E-value=0.15  Score=34.05  Aligned_cols=44  Identities=18%  Similarity=0.101  Sum_probs=35.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l  124 (173)
                      .+|..+|..|++.|   ..+..|+++|++|+.+|.++..++...+..
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~   62 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTER   62 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHh
Confidence            45789999998765   366788999999999999988776665544

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=91.65  E-value=0.08  Score=38.09  Aligned_cols=37  Identities=14%  Similarity=0.214  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCchHHHHH-----HHHHHHcCCEEEEEecChh
Q 030706           79 PPYNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~ai-----a~~l~~~G~~V~~~~r~~~  115 (173)
                      .++.++|+.|-||.|+.+     |..|++.|.+|.++|-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            467788888899999876     6889999999999998753

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.61  E-value=0.51  Score=33.07  Aligned_cols=82  Identities=21%  Similarity=0.069  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC----CceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG----EQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      +|..+|-.|++.|--.++.-++.....+|+.++++++..+...+.+.+...    ..++.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            567999999988877677667777778999999999887777666654321    124666666753211          


Q ss_pred             HhcCCccEEEEcccCC
Q 030706          155 KNLKYVDIWVFMSDLH  170 (173)
Q Consensus       155 ~~~g~id~lVn~AG~~  170 (173)
                      ...+.+|.++.++++.
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1224788888877654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.61  E-value=0.67  Score=31.29  Aligned_cols=60  Identities=13%  Similarity=0.092  Sum_probs=38.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS  141 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (173)
                      +.++.+|=.|++.|  . .+..|+++|++|+.++.++..++..........- ..+.+...|+.
T Consensus        29 ~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~-~~~~~~~~d~~   88 (198)
T d2i6ga1          29 VAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGL-DNLQTDLVDLN   88 (198)
T ss_dssp             SCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-TTEEEEECCTT
T ss_pred             CCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccc-cchhhhheecc
Confidence            34557888887543  3 5568889999999999998877766554443322 23444444543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.40  E-value=0.074  Score=42.64  Aligned_cols=34  Identities=18%  Similarity=0.300  Sum_probs=28.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEec
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSR  112 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r  112 (173)
                      +...+|+|.|+ ||+|..+++.|+..| .++.++|.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            44568899886 799999999999999 58888865

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.29  E-value=0.17  Score=36.58  Aligned_cols=34  Identities=21%  Similarity=0.322  Sum_probs=30.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~  111 (173)
                      .++||+++|.| .|-+|..+++.|.+.|++|+.++
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            47899999998 68899999999999999988664

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.24  E-value=0.18  Score=36.14  Aligned_cols=34  Identities=29%  Similarity=0.234  Sum_probs=30.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~  111 (173)
                      .++||+++|-| .|-+|..+++.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            47899999987 68999999999999999998665

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.23  E-value=0.38  Score=33.58  Aligned_cols=57  Identities=19%  Similarity=0.068  Sum_probs=39.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV  140 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv  140 (173)
                      +.+++|=.|++.|   .++..|++.|++|+.++.++.-++.+.+.......  ++.++..|+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~--~i~~~~~d~   97 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDV   97 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCG
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccc--cchheehhh
Confidence            4568998997765   34567888999999999998777666665544322  344555544

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=91.20  E-value=0.55  Score=32.23  Aligned_cols=60  Identities=17%  Similarity=0.085  Sum_probs=41.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG  143 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~  143 (173)
                      +..+|=.|++.|.   .+..|++.|++|+.++.+++..+.+.+.+.... ..++.++..|..+.
T Consensus        16 ~~rVLDiGcG~G~---~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-~~~i~~~~~d~~~l   75 (231)
T d1vl5a_          16 NEEVLDVATGGGH---VANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-HQQVEYVQGDAEQM   75 (231)
T ss_dssp             CCEEEEETCTTCH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEECCC-CC
T ss_pred             cCEEEEecccCcH---HHHHHHHhCCEEEEEECCHHHHhhhhhcccccc-cccccccccccccc
Confidence            5678888877664   346678889999999999877766655554433 23677877776553

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.16  E-value=0.12  Score=36.97  Aligned_cols=30  Identities=20%  Similarity=0.418  Sum_probs=25.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      ++|.|| |-.|.++|.+|+++|.+|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            677765 678999999999999999999874

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.08  E-value=0.2  Score=34.72  Aligned_cols=37  Identities=27%  Similarity=0.238  Sum_probs=32.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+.+|++.|.|. |.||+.+++.+...|.+|+..++..
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            478899999985 6899999999999999999998753

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.86  E-value=0.21  Score=35.16  Aligned_cols=59  Identities=19%  Similarity=0.030  Sum_probs=41.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS  141 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (173)
                      ..++.+|=.|++.|.   ++..|++.|.+|+.+|.+++.++.+.+.......  ++.++..|+.
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~--~v~~~~~d~~   94 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDIS   94 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGG
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCc--cceeeccchh
Confidence            456789999987764   6778889999999999998877666555443322  3555555543

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.83  E-value=1.2  Score=29.13  Aligned_cols=30  Identities=27%  Similarity=0.227  Sum_probs=25.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVI  108 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~  108 (173)
                      +|+.+.|.+.+||.|--++..+.+.|.++.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~   31 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA   31 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC
Confidence            477888888999999999999999896653

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.79  E-value=0.66  Score=31.49  Aligned_cols=45  Identities=16%  Similarity=0.033  Sum_probs=33.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE  127 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~  127 (173)
                      +..+|=.|++.|.   ++..|++.|++|+.+|.+++..+...+.....
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~   82 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR   82 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc
Confidence            4578889987765   55678888999999999987776666555443

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.78  E-value=0.56  Score=31.31  Aligned_cols=77  Identities=12%  Similarity=0.037  Sum_probs=45.6

Q ss_pred             CCCEEEEEc-CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITG-STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItG-a~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      .|+.+|=.| |+|.+|.    ..+.+|++|+.++.++...+.+.+.++...-..++...     +.+   .+........
T Consensus        41 ~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~-----~~d---~~~~~~~~~~  108 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVAL-----PVE---VFLPEAKAQG  108 (171)
T ss_dssp             TCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECS-----CHH---HHHHHHHHTT
T ss_pred             CCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhhccccceeee-----ehh---cccccccccC
Confidence            456666444 5566654    45567999999999998887777666655333233222     222   2223333344


Q ss_pred             CCccEEEEcc
Q 030706          158 KYVDIWVFMS  167 (173)
Q Consensus       158 g~id~lVn~A  167 (173)
                      .+.|+++.+.
T Consensus       109 ~~fD~If~DP  118 (171)
T d1ws6a1         109 ERFTVAFMAP  118 (171)
T ss_dssp             CCEEEEEECC
T ss_pred             CccceeEEcc
Confidence            5788888764

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.52  E-value=0.14  Score=36.95  Aligned_cols=30  Identities=27%  Similarity=0.483  Sum_probs=25.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEecC
Q 030706           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~  113 (173)
                      |+|.|| |-+|.++|.+|+++|. +|++++++
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            667765 6899999999999996 69999875

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.38  E-value=0.29  Score=36.03  Aligned_cols=34  Identities=9%  Similarity=0.160  Sum_probs=30.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~  111 (173)
                      .+.||+++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            488999999875 7899999999999999988765

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.28  E-value=0.73  Score=33.93  Aligned_cols=75  Identities=20%  Similarity=0.103  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      .+|+++|-.|++.|+   ++..+++.|+ +|++++.++ ..+...+.........++.++..|+.+.+-          .
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------P  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------c
Confidence            468999999987664   3456677886 799998775 344444444444444468888888765421          1


Q ss_pred             cCCccEEEEc
Q 030706          157 LKYVDIWVFM  166 (173)
Q Consensus       157 ~g~id~lVn~  166 (173)
                      ...+|++|..
T Consensus       103 ~~~~D~i~se  112 (328)
T d1g6q1_         103 FPKVDIIISE  112 (328)
T ss_dssp             SSCEEEEEEC
T ss_pred             ccceeEEEEE
Confidence            1367777653

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.25  E-value=0.23  Score=36.64  Aligned_cols=35  Identities=20%  Similarity=0.357  Sum_probs=28.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      .|.++|.|| |--|..+|..|++.|.+|.++..+..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            578888886 46688999999999999999987653

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=90.25  E-value=0.41  Score=33.73  Aligned_cols=76  Identities=17%  Similarity=0.050  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK  158 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  158 (173)
                      .|..+|-.|++.|--.   ..|++.+.+|+.++.+++..+...+.+. ..  .++.++..|..+-          ....+
T Consensus        70 ~g~~VLdIG~GsGy~t---a~La~l~~~V~aiE~~~~~~~~A~~~~~-~~--~nv~~~~~d~~~g----------~~~~~  133 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYT---ALIAEIVDKVVSVEINEKMYNYASKLLS-YY--NNIKLILGDGTLG----------YEEEK  133 (224)
T ss_dssp             TTCEEEEECCTTSHHH---HHHHHHSSEEEEEESCHHHHHHHHHHHT-TC--SSEEEEESCGGGC----------CGGGC
T ss_pred             ccceEEEecCCCCHHH---HHHHHHhcccccccccHHHHHHHHHHHh-cc--cccccccCchhhc----------chhhh
Confidence            5678999998776433   3466667899999998877665544433 22  3588888886431          11236


Q ss_pred             CccEEEEcccCC
Q 030706          159 YVDIWVFMSDLH  170 (173)
Q Consensus       159 ~id~lVn~AG~~  170 (173)
                      +.|.+|.++++.
T Consensus       134 pfD~Iiv~~a~~  145 (224)
T d1vbfa_         134 PYDRVVVWATAP  145 (224)
T ss_dssp             CEEEEEESSBBS
T ss_pred             hHHHHHhhcchh
Confidence            789998888764

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.12  E-value=0.17  Score=36.04  Aligned_cols=34  Identities=21%  Similarity=0.176  Sum_probs=28.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEe
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICS  111 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~  111 (173)
                      .+++++++|-| .|-+|..+++.|.+ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            37889999886 78999999999975 599988665

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.98  E-value=0.19  Score=34.19  Aligned_cols=31  Identities=16%  Similarity=0.225  Sum_probs=26.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      ++|.|+ |--|...|..|++.|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            677774 5678999999999999999998864

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.77  E-value=0.84  Score=31.64  Aligned_cols=81  Identities=17%  Similarity=0.143  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHH-HHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIGY-ALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~-aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..|++|=+|...|... .+++.+ ..|.+|+.++.+++..+.....+...+-..++.++..|..      .++.++.+.+
T Consensus        56 kpk~ILEiGt~~G~Sti~la~al-~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~------e~l~~l~~~~  128 (214)
T d2cl5a1          56 SPSLVLELGAYCGYSAVRMARLL-QPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQ------DLIPQLKKKY  128 (214)
T ss_dssp             CCSEEEEECCTTSHHHHHHHTTC-CTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHGGGHHHHS
T ss_pred             CCCEEEEEccCchhHHHHHHHhC-CCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecccc------ccccchhhcc
Confidence            4578999997665543 222222 3467999999998877777777766554446777776642      2233333333


Q ss_pred             --CCccEEEEc
Q 030706          158 --KYVDIWVFM  166 (173)
Q Consensus       158 --g~id~lVn~  166 (173)
                        +.+|.++.-
T Consensus       129 ~~~~~D~ifiD  139 (214)
T d2cl5a1         129 DVDTLDMVFLD  139 (214)
T ss_dssp             CCCCEEEEEEC
T ss_pred             cccccceeeec
Confidence              467776654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=89.30  E-value=1.3  Score=26.52  Aligned_cols=74  Identities=16%  Similarity=0.149  Sum_probs=45.0

Q ss_pred             CCCCEEEEEcCCchHH-HHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           78 LPPYNVLITGSTKGIG-YALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG-~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      -..|.+.+.|-+ |+| .++|+.|.++|+.|...|+.....   .+.+.+. +   +.++..+-  ++.           
T Consensus         6 ~~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~~---~~~L~~~-G---i~v~~g~~--~~~-----------   64 (96)
T d1p3da1           6 RRVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGVV---TQRLAQA-G---AKIYIGHA--EEH-----------   64 (96)
T ss_dssp             TTCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSHH---HHHHHHT-T---CEEEESCC--GGG-----------
T ss_pred             hhCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCChh---hhHHHHC-C---CeEEECCc--ccc-----------
Confidence            455778887743 344 467999999999999999875432   2334433 2   22222221  111           


Q ss_pred             cCCccEEEEcccCCCC
Q 030706          157 LKYVDIWVFMSDLHSS  172 (173)
Q Consensus       157 ~g~id~lVn~AG~~~~  172 (173)
                      ....|.+|...++...
T Consensus        65 i~~~d~vV~S~AI~~~   80 (96)
T d1p3da1          65 IEGASVVVVSSAIKDD   80 (96)
T ss_dssp             GTTCSEEEECTTSCTT
T ss_pred             CCCCCEEEECCCcCCC
Confidence            1257999998887543

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=89.24  E-value=0.41  Score=33.08  Aligned_cols=79  Identities=15%  Similarity=0.065  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC-----------------
Q 030706           79 PPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV-----------------  140 (173)
Q Consensus        79 ~~k~~lItGa~-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----------------  140 (173)
                      ++..+|=.|++ |.+...+++.+...|++|+.+|.+++-++...+.+.......++.+...|+                 
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~~~l  118 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFTL  118 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEESCG
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEeeec
Confidence            45678888865 545666666655678999999999988777766665433222233333222                 


Q ss_pred             --CCHHHHHHHHHHHHHhc
Q 030706          141 --SEGNEVADLVAFAQKNL  157 (173)
Q Consensus       141 --~~~~~v~~~~~~~~~~~  157 (173)
                        .+.++..++++++.+.+
T Consensus       119 ~~~~~~d~~~~l~~i~~~L  137 (225)
T d1im8a_         119 QFLPPEDRIALLTKIYEGL  137 (225)
T ss_dssp             GGSCGGGHHHHHHHHHHHE
T ss_pred             cccChhhHHHHHHHHHHhC
Confidence              23455667777776655

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.10  E-value=0.17  Score=35.05  Aligned_cols=34  Identities=18%  Similarity=0.228  Sum_probs=28.5

Q ss_pred             CCEEEEEcCCchHHHH-----HHHHHHHcCCEEEEEecC
Q 030706           80 PYNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        80 ~k~~lItGa~~gIG~a-----ia~~l~~~G~~V~~~~r~  113 (173)
                      +|++.|+|+-||.|+.     +|..|++.|.+|.++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6889999999998865     467888899999999854

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=89.03  E-value=1.1  Score=30.81  Aligned_cols=60  Identities=20%  Similarity=0.077  Sum_probs=42.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      .|..+|=.|++.|.   ++..|++.|++|+.+|.++..++.+.+.+...+. .++.++..|+.+
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~-~~~~~~~~d~~~   75 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGV-ENVRFQQGTAES   75 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTC-CSEEEEECBTTB
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccc-cccccccccccc
Confidence            45678888877664   4456777889999999998877666666555433 257788877654

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=88.56  E-value=2.2  Score=29.77  Aligned_cols=86  Identities=12%  Similarity=0.082  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHH-HHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706           79 PPYNVLITGSTKGIG-YALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL  157 (173)
Q Consensus        79 ~~k~~lItGa~~gIG-~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  157 (173)
                      ..|++|=.|...|.. ..+++.+- .+.+|+.++.+++..+...+.+.+.+-..++.++..|.  .+.+.++.+. ....
T Consensus        59 ~~k~iLEiGT~~GyStl~la~al~-~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a--~~~L~~l~~~-~~~~  134 (227)
T d1susa1          59 NAKNTMEIGVYTGYSLLATALAIP-EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA--LPVLDEMIKD-EKNH  134 (227)
T ss_dssp             TCCEEEEECCGGGHHHHHHHHHSC-TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH--HHHHHHHHHC-GGGT
T ss_pred             CCCcEEEecchhhhhHHHHHhhCC-CCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHH--HHHHHHHHhc-cccC
Confidence            568999999876654 33334443 45799999999988777777776655445677776653  2222332221 1124


Q ss_pred             CCccEEEEccc
Q 030706          158 KYVDIWVFMSD  168 (173)
Q Consensus       158 g~id~lVn~AG  168 (173)
                      +.+|.++..|.
T Consensus       135 ~~fD~iFiDa~  145 (227)
T d1susa1         135 GSYDFIFVDAD  145 (227)
T ss_dssp             TCBSEEEECSC
T ss_pred             CceeEEEeccc
Confidence            67888887653

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=88.10  E-value=1.3  Score=29.02  Aligned_cols=33  Identities=24%  Similarity=0.283  Sum_probs=26.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEec
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKA--GDNVIICSR  112 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~--G~~V~~~~r  112 (173)
                      .|++.|.|++|.||.....-+.+.  .++|+.+.-
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa   36 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA   36 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEe
Confidence            478999999999999988877664  467776543

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.93  E-value=1.4  Score=30.74  Aligned_cols=83  Identities=17%  Similarity=0.141  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cC----CEEEEEecChhhHHHHHHHHHHH----hCCceEEEEEeeCCCHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLK-AG----DNVIICSRSAERVDSAVQSLREE----FGEQHVWGTKCDVSEGNEVADL  149 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~-~G----~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dv~~~~~v~~~  149 (173)
                      ++..+|..|+++|--.++.-.++. .|    .+|+.++++++-.+...+.+...    .+..++.++..|..+-.     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            577999999887766666666554 45    48999999887666554443321    11125888888864311     


Q ss_pred             HHHHHHhcCCccEEEEcccCCC
Q 030706          150 VAFAQKNLKYVDIWVFMSDLHS  171 (173)
Q Consensus       150 ~~~~~~~~g~id~lVn~AG~~~  171 (173)
                           ...++.|.+|.++++..
T Consensus       155 -----~~~~~fD~Iiv~~a~~~  171 (223)
T d1r18a_         155 -----PPNAPYNAIHVGAAAPD  171 (223)
T ss_dssp             -----GGGCSEEEEEECSCBSS
T ss_pred             -----ccccceeeEEEEeechh
Confidence                 23357898888887643

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=87.46  E-value=2.7  Score=27.82  Aligned_cols=74  Identities=14%  Similarity=0.103  Sum_probs=39.0

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-----CCEEEEEecChhhHHHHHHHHHH---HhCC-ceEEEEEeeCCCHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYA-LAKEFLKA-----GDNVIICSRSAERVDSAVQSLRE---EFGE-QHVWGTKCDVSEGNEVADLVA  151 (173)
Q Consensus        82 ~~lItGa~~gIG~a-ia~~l~~~-----G~~V~~~~r~~~~~~~~~~~l~~---~~~~-~~~~~~~~Dv~~~~~v~~~~~  151 (173)
                      .+.|.||++ .|.. +...++..     +.+|++.|.++++++.....+..   ..+. .++.. ..|   .   ++   
T Consensus         5 KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d---~---~e---   73 (167)
T d1u8xx1           5 SIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-TTD---P---EE---   73 (167)
T ss_dssp             EEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-ESC---H---HH---
T ss_pred             eEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-cCC---h---hh---
Confidence            466667654 3332 33333332     24899999999887644333332   2222 12221 222   2   11   


Q ss_pred             HHHHhcCCccEEEEcccCC
Q 030706          152 FAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       152 ~~~~~~g~id~lVn~AG~~  170 (173)
                          ....-|+||+.||+.
T Consensus        74 ----al~~AD~Vvitag~~   88 (167)
T d1u8xx1          74 ----AFTDVDFVMAHIRVG   88 (167)
T ss_dssp             ----HHSSCSEEEECCCTT
T ss_pred             ----ccCCCCEEEECCCcC
Confidence                123689999999874

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.46  E-value=2.4  Score=27.19  Aligned_cols=35  Identities=14%  Similarity=0.169  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCC---chHHHHHHHHHHHcCCEEEEEecC
Q 030706           79 PPYNVLITGST---KGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        79 ~~k~~lItGa~---~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      +.|++.|.|++   +..|..+.+.|.+.|++|+.+...
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~   55 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK   55 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence            56899999998   579999999999999999888654

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.41  E-value=0.42  Score=33.28  Aligned_cols=43  Identities=16%  Similarity=0.094  Sum_probs=34.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l  124 (173)
                      .++.+|..|++.|   ..+..|++.|++|+.+|.++...+.+.++.
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            5678999998765   357888999999999999988776655543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=87.36  E-value=0.39  Score=34.79  Aligned_cols=33  Identities=21%  Similarity=0.320  Sum_probs=22.6

Q ss_pred             CEEEEEcC-CchH---HHHHHHHHHHcCCEEEEEecC
Q 030706           81 YNVLITGS-TKGI---GYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        81 k~~lItGa-~~gI---G~aia~~l~~~G~~V~~~~r~  113 (173)
                      |.++|++| +||=   ..+++++|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45566554 4332   457889999999999877643

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=87.28  E-value=1.7  Score=30.93  Aligned_cols=61  Identities=10%  Similarity=-0.062  Sum_probs=40.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      ++..+|=.|++.|.   ++..|+++ |++|+.++.++...+...+.....+-..++.++.+|..+
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~  128 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE  128 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccc
Confidence            56788888875442   34445554 789999999987766665555544333367777777755

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.20  E-value=1.6  Score=34.51  Aligned_cols=74  Identities=9%  Similarity=0.013  Sum_probs=50.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN  156 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  156 (173)
                      +..++++.+|.-|.|.+..+... +.+|+++.....-.+-...++....+ .+++.+.+| .+.++++.+++++...
T Consensus       152 ~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~-~Nv~~i~v~-G~fDDcq~~vk~~f~d  226 (511)
T d1kl7a_         152 QITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPD-ENVQTLSVT-GTFDNCQDIVKAIFGD  226 (511)
T ss_dssp             CEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCC-TTEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred             eEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhcCC-ceEEEEEec-cChHHHHHHHHHHHhh
Confidence            34455556677999999998854 67888888654333323334443323 368888888 6899999999988743

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=87.16  E-value=2.1  Score=26.30  Aligned_cols=81  Identities=21%  Similarity=0.091  Sum_probs=52.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY  159 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  159 (173)
                      ||++||.=-..-+...+...|-+.|++|+....+..   +..+.+.....  .+.++-.++-+.+. -++++++++....
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~---~al~~~~~~~~--dliilD~~mp~~~G-~e~~~~ir~~~~~   74 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGR---EAVEKYKELKP--DIVTMDITMPEMNG-IDAIKEIMKIDPN   74 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHHCC--SEEEEECSCGGGCH-HHHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHH---HHHHHHHhccC--CEEEEecCCCCCCH-HHHHHHHHHhCCC
Confidence            688999988888988898889889999876655443   33344444322  34444333334433 4567777777777


Q ss_pred             ccEEEEc
Q 030706          160 VDIWVFM  166 (173)
Q Consensus       160 id~lVn~  166 (173)
                      +-+++..
T Consensus        75 ~pvi~ls   81 (118)
T d1u0sy_          75 AKIIVCS   81 (118)
T ss_dssp             CCEEEEE
T ss_pred             CcEEEEE
Confidence            7777654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=86.92  E-value=3.6  Score=30.10  Aligned_cols=80  Identities=14%  Similarity=0.021  Sum_probs=53.7

Q ss_pred             CCCCEEEEEc-CCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           78 LPPYNVLITG-STKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        78 ~~~k~~lItG-a~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ..|+.+|=.. ++|+++.+    ++..|+ .|+.++.++...+...+.++..+- ..++.++..|+      ...++...
T Consensus       143 ~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~------~~~l~~~~  212 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDV------FDYFKYAR  212 (317)
T ss_dssp             TBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCH------HHHHHHHH
T ss_pred             hCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccH------HHHHHHHH
Confidence            3578777554 55666543    345676 799999999888777777765432 23678888875      34455555


Q ss_pred             HhcCCccEEEEcc
Q 030706          155 KNLKYVDIWVFMS  167 (173)
Q Consensus       155 ~~~g~id~lVn~A  167 (173)
                      ++..+.|+||...
T Consensus       213 ~~~~~fD~Ii~DP  225 (317)
T d2b78a2         213 RHHLTYDIIIIDP  225 (317)
T ss_dssp             HTTCCEEEEEECC
T ss_pred             hhcCCCCEEEEcC
Confidence            5556899999763

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=86.81  E-value=0.34  Score=33.87  Aligned_cols=31  Identities=26%  Similarity=0.392  Sum_probs=26.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      |+|.|| |--|+..|..|++.|++|+++.+++
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           3 VAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            677776 5678899999999999999998754

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=86.57  E-value=1.2  Score=30.04  Aligned_cols=72  Identities=21%  Similarity=0.093  Sum_probs=45.6

Q ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEEEE
Q 030706           86 TGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVF  165 (173)
Q Consensus        86 tGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn  165 (173)
                      |-|.||-    .+.+++.+.+|+.+|++++..+.... +   .. .++.++..+.++.+   ..+...  ..+.+|+++.
T Consensus        26 T~G~GGh----s~~iL~~~~~viaiD~D~~ai~~a~~-~---~~-~~~~~~~~~f~~~~---~~l~~~--~~~~vdgIl~   91 (182)
T d1wg8a2          26 TLGGAGH----ARGILERGGRVIGLDQDPEAVARAKG-L---HL-PGLTVVQGNFRHLK---RHLAAL--GVERVDGILA   91 (182)
T ss_dssp             TCTTSHH----HHHHHHTTCEEEEEESCHHHHHHHHH-T---CC-TTEEEEESCGGGHH---HHHHHT--TCSCEEEEEE
T ss_pred             CCCCcHH----HHHHhcccCcEEEEhhhhhHHHHHhh-c---cc-cceeEeehHHHHHH---HHHHHc--CCCccCEEEE
Confidence            4445553    45556677899999999877654332 1   22 36888887776543   333322  2368999999


Q ss_pred             cccCCC
Q 030706          166 MSDLHS  171 (173)
Q Consensus       166 ~AG~~~  171 (173)
                      .-|+.+
T Consensus        92 DLGvSs   97 (182)
T d1wg8a2          92 DLGVSS   97 (182)
T ss_dssp             ECSCCH
T ss_pred             EccCCH
Confidence            888753

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=86.40  E-value=1.9  Score=29.91  Aligned_cols=62  Identities=18%  Similarity=0.047  Sum_probs=41.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      ..|+.+|=.|++.|   .++..|++ .|++|+.++.++...+...+.....+...++.+...|+.+
T Consensus        32 ~pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~   94 (245)
T d1nkva_          32 KPGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG   94 (245)
T ss_dssp             CTTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred             CCCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhh
Confidence            34778888887655   23445555 4789999999987776665555544434468888888764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.01  E-value=0.43  Score=34.39  Aligned_cols=30  Identities=30%  Similarity=0.570  Sum_probs=25.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      ++|.|+ |..|...|..|++.|++|+++.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            677775 678999999999999999999864

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.95  E-value=1.3  Score=28.22  Aligned_cols=76  Identities=13%  Similarity=0.062  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCc----------hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706           79 PPYNVLITGSTK----------GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVAD  148 (173)
Q Consensus        79 ~~k~~lItGa~~----------gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~  148 (173)
                      ..|.+||.|++.          --+...++.|.+.|++++++..+++.......      -.+++.+-.   -..+++.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d------~aD~lYfeP---lt~e~v~~   76 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE------MADATYIEP---IHWEVVRK   76 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG------GSSEEECSC---CCHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh------hcceeeeec---CCHHHHHH
Confidence            347899999742          24566778889999999999998865321110      112333322   34566666


Q ss_pred             HHHHHHHhcCCccEEEEccc
Q 030706          149 LVAFAQKNLKYVDIWVFMSD  168 (173)
Q Consensus       149 ~~~~~~~~~g~id~lVn~AG  168 (173)
                      +++.-     ++|+++-..|
T Consensus        77 Ii~~E-----~pd~il~~~G   91 (127)
T d1a9xa3          77 IIEKE-----RPDAVLPTMG   91 (127)
T ss_dssp             HHHHH-----CCSEEECSSS
T ss_pred             HHHHh-----CcCCeEEEee
Confidence            66543     7888876554

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=85.89  E-value=0.45  Score=33.02  Aligned_cols=31  Identities=23%  Similarity=0.367  Sum_probs=25.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      ++|.|| |--|...|..|++.|.+|++++++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677775 4678899999999999999998754

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.87  E-value=0.26  Score=34.04  Aligned_cols=34  Identities=18%  Similarity=0.341  Sum_probs=27.9

Q ss_pred             CEEEEEcCCchHHHH-----HHHHHHHcCCEEEEEecCh
Q 030706           81 YNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        81 k~~lItGa~~gIG~a-----ia~~l~~~G~~V~~~~r~~  114 (173)
                      |++.|+++-||.|+.     +|..|++.|.+|.++|-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            789999999887754     4678888999999998653

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=85.51  E-value=0.49  Score=31.13  Aligned_cols=30  Identities=27%  Similarity=0.171  Sum_probs=23.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC  110 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~  110 (173)
                      ++.++|.|| |.+|..+|..|.+.|.++.++
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            567888775 689999999999999764443

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=85.46  E-value=1.5  Score=30.72  Aligned_cols=60  Identities=18%  Similarity=0.059  Sum_probs=40.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS  141 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (173)
                      +++++|=.|++.|-   ....+++.| .+|+.+|.+++.++.+.+.........++.++..|+.
T Consensus        24 ~~~~VLDlGCG~G~---~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~   84 (252)
T d1ri5a_          24 RGDSVLDLGCGKGG---DLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSY   84 (252)
T ss_dssp             TTCEEEEETCTTTT---THHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTT
T ss_pred             CcCEEEEecccCcH---HHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchh
Confidence            46788888876551   234566667 4899999999888777666554333335777777763

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.32  E-value=0.45  Score=33.88  Aligned_cols=33  Identities=30%  Similarity=0.379  Sum_probs=27.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      .|+|.||+ --|+.+|..|.+.|.+|+++.+.++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            37777764 7899999999999999999998753

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.26  E-value=2.9  Score=28.86  Aligned_cols=62  Identities=19%  Similarity=0.174  Sum_probs=40.5

Q ss_pred             CCCCEEEEEcCCchHH-HHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC
Q 030706           78 LPPYNVLITGSTKGIG-YALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV  140 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG-~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv  140 (173)
                      ...|++|=.|..-|.. ..+++.+. .+.+|+.++.+++..+...+.+...+-..++.+...|.
T Consensus        58 ~~~k~vLEiGt~~GyStl~~a~al~-~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda  120 (219)
T d2avda1          58 IQAKKALDLGTFTGYSALALALALP-ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA  120 (219)
T ss_dssp             TTCCEEEEECCTTSHHHHHHHTTSC-TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred             cCCCeEEEEechhhHHHHHHHHhCC-CCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeeh
Confidence            3568999999765543 33344432 35699999999887777766666554444566665553

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=85.01  E-value=1.1  Score=30.29  Aligned_cols=37  Identities=19%  Similarity=0.014  Sum_probs=32.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+.++++.|.| .|.||+.+++.+...|.+|+..++..
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          41 EARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            37889999986 57999999999999999999998753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=84.94  E-value=0.73  Score=27.46  Aligned_cols=68  Identities=16%  Similarity=0.175  Sum_probs=41.3

Q ss_pred             EEEEcCCchHHH-HHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706           83 VLITGSTKGIGY-ALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD  161 (173)
Q Consensus        83 ~lItGa~~gIG~-aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  161 (173)
                      +-+.| -+|+|- ++|+.|.++|+.|...|+....   ..+.|++.+-  .+. ..-|..+              ....|
T Consensus         4 ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~---~t~~L~~~Gi--~i~-~gh~~~~--------------i~~~d   62 (89)
T d1j6ua1           4 IHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETE---RTAYLRKLGI--PIF-VPHSADN--------------WYDPD   62 (89)
T ss_dssp             EEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHTTC--CEE-SSCCTTS--------------CCCCS
T ss_pred             EEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCCh---hHHHHHHCCC--eEE-eeecccc--------------cCCCC
Confidence            44444 455664 6899999999999999987543   2334554422  221 1112211              13678


Q ss_pred             EEEEcccCCC
Q 030706          162 IWVFMSDLHS  171 (173)
Q Consensus       162 ~lVn~AG~~~  171 (173)
                      .||...++-.
T Consensus        63 ~vV~SsAI~~   72 (89)
T d1j6ua1          63 LVIKTPAVRD   72 (89)
T ss_dssp             EEEECTTCCT
T ss_pred             EEEEecCcCC
Confidence            9998888754

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=84.88  E-value=1.5  Score=29.10  Aligned_cols=43  Identities=21%  Similarity=0.394  Sum_probs=27.2

Q ss_pred             EEEEEcCCchHHHH--HHHHHHHc----CCEEEEEecChhhHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYA--LAKEFLKA----GDNVIICSRSAERVDSAVQSLR  125 (173)
Q Consensus        82 ~~lItGa~~gIG~a--ia~~l~~~----G~~V~~~~r~~~~~~~~~~~l~  125 (173)
                      .+.|.|| |.+|..  +...++..    +.++++.|.++++++.....+.
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~   52 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAK   52 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHH
Confidence            5667775 555544  44445542    3599999999887765444443

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.55  E-value=0.87  Score=30.71  Aligned_cols=35  Identities=20%  Similarity=0.329  Sum_probs=27.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~  119 (173)
                      +.|.| .|-+|+.+|..|+ .|++|+..|.+++..+.
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~   37 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDK   37 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHH
Confidence            45555 7899999998665 69999999998766543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.55  E-value=1  Score=31.67  Aligned_cols=32  Identities=28%  Similarity=0.325  Sum_probs=25.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      +.|+|.|| |-=|+..|..|++.|++|.++..+
T Consensus         6 ~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           6 GKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            45777775 455889999999999999998654

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.51  E-value=0.84  Score=32.46  Aligned_cols=83  Identities=8%  Similarity=-0.045  Sum_probs=54.1

Q ss_pred             CEEEEEc-CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH-hcC
Q 030706           81 YNVLITG-STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK-NLK  158 (173)
Q Consensus        81 k~~lItG-a~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~g  158 (173)
                      ..+|=.| |+|.|+..++..+-  +++|+.++.+++.++-+.+.++...-..++..+..|..+.  +   +..+.. ..+
T Consensus        63 ~~~LDiGtGsg~I~~~l~~~~~--~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~--~---~~~~~~~~~~  135 (250)
T d2h00a1          63 RRGIDIGTGASCIYPLLGATLN--GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL--L---MDALKEESEI  135 (250)
T ss_dssp             CEEEEESCTTTTHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS--S---TTTSTTCCSC
T ss_pred             ceEEEeCCCchHHHHHHHHhCC--CccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHh--h---hhhhhhcccC
Confidence            3566566 56779988887763  6899999999998887777776654444677766554221  1   111111 225


Q ss_pred             CccEEEEcccCC
Q 030706          159 YVDIWVFMSDLH  170 (173)
Q Consensus       159 ~id~lVn~AG~~  170 (173)
                      .+|++|.|-=+.
T Consensus       136 ~fD~ivsNPPY~  147 (250)
T d2h00a1         136 IYDFCMCNPPFF  147 (250)
T ss_dssp             CBSEEEECCCCC
T ss_pred             ceeEEEecCccc
Confidence            789999986443

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.47  E-value=0.97  Score=31.15  Aligned_cols=47  Identities=23%  Similarity=0.294  Sum_probs=31.2

Q ss_pred             CCCCEEEEEcCCchHH-HHHHHHHHHcCCEEEEEecChhhHHHHHHHHHH
Q 030706           78 LPPYNVLITGSTKGIG-YALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG-~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~  126 (173)
                      -+|.++|=.|++.|.- ..+++ +...| +|+.++.++..++.+.+..+.
T Consensus        55 kpg~~VLDlGcG~G~~~~~la~-~v~~g-~V~gvDis~~~i~~a~~~a~~  102 (209)
T d1nt2a_          55 RGDERVLYLGAASGTTVSHLAD-IVDEG-IIYAVEYSAKPFEKLLELVRE  102 (209)
T ss_dssp             CSSCEEEEETCTTSHHHHHHHH-HTTTS-EEEEECCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCcCCHHHHHHHH-hccCC-eEEEEeCCHHHHHHHHHHhhc
Confidence            3467899999776643 33333 33334 899999999887776655443

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.05  E-value=0.67  Score=32.47  Aligned_cols=32  Identities=22%  Similarity=0.363  Sum_probs=26.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~  115 (173)
                      ++|.|| |.-|...|..|++.|.+|+++.+++.
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            677775 56788899999999999999998754

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.79  E-value=1.7  Score=30.92  Aligned_cols=60  Identities=15%  Similarity=0.096  Sum_probs=42.5

Q ss_pred             CCCEEEEEcCC-chHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706           79 PPYNVLITGST-KGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE  142 (173)
Q Consensus        79 ~~k~~lItGa~-~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~  142 (173)
                      .|.++|-.|++ |+++..++    +.| ++|+.++.++...+.+.+.++...-..++.++..|..+
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a----~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~  168 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIA----VYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD  168 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHH----HHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT
T ss_pred             CccEEEECcceEcHHHHHHH----HhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHH
Confidence            57888888854 44555444    345 69999999998887777766654434468888888754

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.63  E-value=5.8  Score=28.18  Aligned_cols=27  Identities=22%  Similarity=0.175  Sum_probs=18.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEE
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVI  108 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~  108 (173)
                      ..+|+..+|.-|.+++..-...|.++.
T Consensus        62 ~~vv~assGn~g~a~A~~a~~~g~~~~   88 (302)
T d1fcja_          62 VELVEPTNGNTGIALAYVAAARGYKLT   88 (302)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHTCCEE
T ss_pred             ceEEEeccccchhHHHHHHHHhccCCc
Confidence            567788888888888876666665433

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=83.54  E-value=1.1  Score=28.01  Aligned_cols=33  Identities=18%  Similarity=0.363  Sum_probs=28.4

Q ss_pred             CEEEEEcCC---chHHHHHHHHHHHcCCEEEEEecC
Q 030706           81 YNVLITGST---KGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        81 k~~lItGa~---~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      |++.|.|++   +..|..+.+.|.+.|++|+.+...
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence            688999987   568999999999999999887643

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=83.37  E-value=1.4  Score=31.88  Aligned_cols=27  Identities=22%  Similarity=0.004  Sum_probs=18.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEE
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVII  109 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~  109 (173)
                      .+++..+|..|.+++......|.++++
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i   97 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPAKI   97 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCEEE
T ss_pred             eeeeeccchhhHHHHHhhcccccceee
Confidence            477777777888887766666654433

>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Transcription-repair coupling factor, TRCF
species: Escherichia coli [TaxId: 562]

Probab=83.34  E-value=3.7  Score=28.35  Aligned_cols=64  Identities=14%  Similarity=0.164  Sum_probs=49.7

Q ss_pred             HHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706          101 LKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMS  167 (173)
Q Consensus       101 ~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A  167 (173)
                      ..+|..|+.++..-+..++..+.+.+..+..++..+...+. .++.++++.++.+  |.+|+||...
T Consensus        28 l~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~-~~eke~im~~F~~--g~~~ILv~Tt   91 (211)
T d2eyqa5          28 ILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMR-ERELERVMNDFHH--QRFNVLVCTT   91 (211)
T ss_dssp             HTTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCC-HHHHHHHHHHHHT--TSCCEEEESS
T ss_pred             HHcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccC-HHHHHHHHHHHHc--CCcceEEEeh
Confidence            44688999999887788888888888888778888888875 4556777777654  5899998753

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.28  E-value=0.75  Score=32.94  Aligned_cols=31  Identities=29%  Similarity=0.363  Sum_probs=25.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      |+|.|| |--|+..|..|++.|.+|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            567765 4568899999999999999998654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.28  E-value=0.87  Score=28.16  Aligned_cols=34  Identities=29%  Similarity=0.394  Sum_probs=25.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEecCh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKA---GDNVIICSRSA  114 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~---G~~V~~~~r~~  114 (173)
                      .+.++|.|| |.+|..+|..|...   |.+|.++.+.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            367888887 79999999766654   46799988754

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.16  E-value=3.5  Score=29.52  Aligned_cols=38  Identities=26%  Similarity=0.415  Sum_probs=25.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDS  119 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~  119 (173)
                      ..+.+||.|+++|.   +++.+++.+ .+|.++..+++-.+-
T Consensus        72 ~p~~vLiiG~G~G~---~~~~~l~~~~~~v~~VEiD~~Vi~~  110 (276)
T d1mjfa_          72 KPKRVLVIGGGDGG---TVREVLQHDVDEVIMVEIDEDVIMV  110 (276)
T ss_dssp             CCCEEEEEECTTSH---HHHHHTTSCCSEEEEEESCHHHHHH
T ss_pred             CCceEEEecCCchH---HHHHHHHhCCceEEEecCCHHHHHH
Confidence            45789999987653   334445554 478888888765443

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.64  E-value=2.1  Score=31.24  Aligned_cols=41  Identities=29%  Similarity=0.531  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQ  122 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~  122 (173)
                      ..|.+||.|+++|   .+++++++..  .+|.++..+++-.+-..+
T Consensus        89 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~  131 (295)
T d1inla_          89 NPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARK  131 (295)
T ss_dssp             SCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHH
T ss_pred             CCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHH
Confidence            3578999998776   3566777653  589999998876554433

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.46  E-value=0.66  Score=33.63  Aligned_cols=32  Identities=25%  Similarity=0.378  Sum_probs=26.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      -++|.|| |--|..+|+.|++.|.+|.++..+.
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4678875 5668899999999999999998754

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=82.42  E-value=4.2  Score=25.74  Aligned_cols=34  Identities=9%  Similarity=0.128  Sum_probs=29.0

Q ss_pred             CCCEEEEEcCC---chHHHHHHHHHHHcCCEEEEEec
Q 030706           79 PPYNVLITGST---KGIGYALAKEFLKAGDNVIICSR  112 (173)
Q Consensus        79 ~~k~~lItGa~---~gIG~aia~~l~~~G~~V~~~~r  112 (173)
                      +.|++.|.|++   +..|..+.+.|.+.|++++.+.-
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~   48 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP   48 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEe
Confidence            56889999997   46999999999999999887754

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.35  E-value=1.4  Score=31.08  Aligned_cols=33  Identities=33%  Similarity=0.416  Sum_probs=27.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEe
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICS  111 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~  111 (173)
                      ++||+++|-|- |.+|..+++.|.+. |++|+.+.
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            78999999886 67999999999875 88887664

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=82.33  E-value=0.39  Score=34.15  Aligned_cols=33  Identities=21%  Similarity=0.384  Sum_probs=26.4

Q ss_pred             CEEEEEcCCchHHHHH-----HHHHHHcCCEEEEEecCh
Q 030706           81 YNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        81 k~~lItGa~~gIG~ai-----a~~l~~~G~~V~~~~r~~  114 (173)
                      |++.|+| =||.|+.+     +..|++.|.+|.++|.++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            5677887 77877655     568899999999999875

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=82.31  E-value=2.7  Score=27.98  Aligned_cols=76  Identities=7%  Similarity=-0.009  Sum_probs=46.5

Q ss_pred             CCCCEEEE-EcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           78 LPPYNVLI-TGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        78 ~~~k~~lI-tGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      +.++++|= -.|+|.+|.+    .+.+|+ .|+.++.+.+..+...+.+..... .++.++..|+.      ..   +..
T Consensus        42 ~~~~~vLDlfaGsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~~~-~~~~ii~~d~~------~~---l~~  107 (183)
T d2fpoa1          42 IVDAQCLDCFAGSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAM------SF---LAQ  107 (183)
T ss_dssp             HTTCEEEETTCTTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHH------HH---HSS
T ss_pred             cchhhhhhhhccccceeee----EEecCcceeEEEEEeechhhHHHHHHhhccc-cceeeeeeccc------cc---ccc
Confidence            45666663 4456767754    455786 799999999888777776665433 35666665531      11   222


Q ss_pred             hcCCccEEEEcc
Q 030706          156 NLKYVDIWVFMS  167 (173)
Q Consensus       156 ~~g~id~lVn~A  167 (173)
                      .....|+++...
T Consensus       108 ~~~~fDlIf~DP  119 (183)
T d2fpoa1         108 KGTPHNIVFVDP  119 (183)
T ss_dssp             CCCCEEEEEECC
T ss_pred             cccccCEEEEcC
Confidence            334678877653

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.30  E-value=4.3  Score=26.92  Aligned_cols=61  Identities=8%  Similarity=0.090  Sum_probs=39.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh-CCceEEEEEeeCC
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVWGTKCDVS  141 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~  141 (173)
                      ..++++|=.|++.|   .++..+++.+.+|++++.++...+...+.+.... ...++.++..|+.
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~  112 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLY  112 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTT
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchh
Confidence            35678888886554   2334566678899999999877766665554432 2234667777754

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.18  E-value=0.7  Score=32.02  Aligned_cols=77  Identities=10%  Similarity=0.033  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHH-HH---HHHHcC-----CEEEEEecChhhHHHHHHHHHHHhC------------CceEEEEE
Q 030706           79 PPYNVLITGSTKGIGYAL-AK---EFLKAG-----DNVIICSRSAERVDSAVQSLREEFG------------EQHVWGTK  137 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~ai-a~---~l~~~G-----~~V~~~~r~~~~~~~~~~~l~~~~~------------~~~~~~~~  137 (173)
                      ..-+++|-||+|.+.+-- .-   +|...|     .+|+.++|.+-..++..+.+.....            ..++.++.
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~   98 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA   98 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence            345799999999886432 11   234444     5789999876444443333221100            02688999


Q ss_pred             eeCCCHHHHHHHHHHHHH
Q 030706          138 CDVSEGNEVADLVAFAQK  155 (173)
Q Consensus       138 ~Dv~~~~~v~~~~~~~~~  155 (173)
                      +|++|.++.+++-+.+.+
T Consensus        99 ~d~~~~~~~~~L~~~l~~  116 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNA  116 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHH
T ss_pred             CcCCChhhHHHHHHHHHH
Confidence            999999999988766554

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=82.05  E-value=0.87  Score=30.69  Aligned_cols=31  Identities=26%  Similarity=0.418  Sum_probs=24.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh
Q 030706           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSA  114 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~  114 (173)
                      |+|.|| |--|+..|..|++.|. +|+++.++.
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           3 VIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            566665 5668899999999996 699988754

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=82.01  E-value=0.62  Score=28.46  Aligned_cols=37  Identities=16%  Similarity=0.202  Sum_probs=29.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      .+.||+++|.|++ -=|..++..|+..+.++++..+..
T Consensus        29 ~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          29 LFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            3789999999975 456788999998888877776654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=81.97  E-value=1.4  Score=26.98  Aligned_cols=34  Identities=26%  Similarity=0.307  Sum_probs=26.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHH---cCCEEEEEecCh
Q 030706           80 PYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSA  114 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~---~G~~V~~~~r~~  114 (173)
                      .|.++|.|| |.+|..+|..|.+   .|.+|.++.+.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            367888876 6899999987655   478999998754

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=81.91  E-value=0.86  Score=30.89  Aligned_cols=30  Identities=13%  Similarity=0.119  Sum_probs=26.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      ++|.|| |..|...|..+++.|.+|+++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            577776 678999999999999999999875

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=81.54  E-value=2.5  Score=32.50  Aligned_cols=72  Identities=17%  Similarity=0.136  Sum_probs=48.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706           80 PYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ  154 (173)
Q Consensus        80 ~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  154 (173)
                      ++..+++..+|..|.+.+..+...+ .+++++.......+....++.. .+. +++.+.+| .+.++++.+++++.
T Consensus       125 ~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P~g~vS~~Q~~Qmtt-~g~-nv~vi~V~-G~fDDcq~lvk~~f  197 (428)
T d1vb3a1         125 KPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCT-LGG-NIETVAID-GDFDACQALVKQAF  197 (428)
T ss_dssp             CCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHHHHHHS-CCT-TEEEEEEE-SCHHHHHHHHHHGG
T ss_pred             ccceeeecCCCCcchhHHHHHhCccccceEEEecCCCCcHHHHHHHhh-ccC-CceEEecC-CChhHHHHHHHHHh
Confidence            4556777788899999999999775 5777776543222222233433 233 68887877 67888888888775

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.53  E-value=3.2  Score=29.70  Aligned_cols=59  Identities=17%  Similarity=0.023  Sum_probs=38.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEee
Q 030706           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCD  139 (173)
Q Consensus        78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D  139 (173)
                      -+|..+|=.|++.|   .++..+++. |++|+.++.+++..+...+...+..-...+.+...|
T Consensus        51 ~~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d  110 (280)
T d2fk8a1          51 KPGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG  110 (280)
T ss_dssp             CTTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC
T ss_pred             CCCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhh
Confidence            35788999997744   234555654 899999999988877666666554333344444444

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.47  E-value=4.3  Score=29.20  Aligned_cols=41  Identities=24%  Similarity=0.523  Sum_probs=28.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-C-CEEEEEecChhhHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKA-G-DNVIICSRSAERVDSAVQ  122 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~  122 (173)
                      ..|.+||.|+++|   .+++++.+. + .+|.++..+++..+-..+
T Consensus        78 ~pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~  120 (285)
T d2o07a1          78 NPRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQVSKK  120 (285)
T ss_dssp             SCCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHH
T ss_pred             CcCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHHHHHh
Confidence            3478999988766   355666665 3 589999988766554433

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=81.41  E-value=0.84  Score=33.33  Aligned_cols=29  Identities=38%  Similarity=0.539  Sum_probs=24.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEec
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r  112 (173)
                      ++|.|++ -=|..+|.+|++.|.+|+++.+
T Consensus         7 viIVGsG-~aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVGSG-PIGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEECcC-HHHHHHHHHHhhCCCeEEEEec
Confidence            6777754 4488999999999999999975

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=81.27  E-value=0.76  Score=33.35  Aligned_cols=30  Identities=40%  Similarity=0.535  Sum_probs=25.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      ++|.|+ |.-|...|..|++.|++|+++.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            677764 577899999999999999999864

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.21  E-value=2.5  Score=26.42  Aligned_cols=38  Identities=13%  Similarity=0.076  Sum_probs=30.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      +...+|.++|.|+ |--+..-|..|.+.+.+|+++.|.+
T Consensus        23 ~~~~~k~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~   60 (126)
T d1trba2          23 FFYRNQKVAVIGG-GNTAVEEALYLSNIASEVHLIHRRD   60 (126)
T ss_dssp             GGGTTSEEEEECS-SHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred             HHhCCCEEEEECC-CHHHHHHHHHHhhcCCcEEEEeecc
Confidence            3368999999998 4566778888888888999999865

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=81.18  E-value=3.8  Score=29.44  Aligned_cols=32  Identities=19%  Similarity=0.291  Sum_probs=24.0

Q ss_pred             CEEEEEcCCch-H--HHHHHHHHHHcCCEEEEEec
Q 030706           81 YNVLITGSTKG-I--GYALAKEFLKAGDNVIICSR  112 (173)
Q Consensus        81 k~~lItGa~~g-I--G~aia~~l~~~G~~V~~~~r  112 (173)
                      |+++.++|++| |  -.+++++|.++|++|+++..
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            45566777754 2  35789999999999988874

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=81.14  E-value=0.31  Score=31.65  Aligned_cols=77  Identities=13%  Similarity=0.006  Sum_probs=41.7

Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCC-------ceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706           88 STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-------QHVWGTKCDVSEGNEVADLVAFAQKNLKYV  160 (173)
Q Consensus        88 a~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  160 (173)
                      |.|-+|+++++.|.+.+..+.+.+|+.++.+++.++.......       ..+.++.  +. .+.+..+++++.   .+=
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~--v~-d~~i~~v~~~l~---~~~   79 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVI--VP-DRYIKTVANHLN---LGD   79 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEEC--SC-TTTHHHHHTTTC---CSS
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEe--cc-chhhhHHHhhhc---ccc
Confidence            4678999999988664444457899988887776654321111       1233332  32 345555555442   122


Q ss_pred             cEEEEcccCC
Q 030706          161 DIWVFMSDLH  170 (173)
Q Consensus       161 d~lVn~AG~~  170 (173)
                      .++|+.++..
T Consensus        80 ~ivi~~s~~~   89 (153)
T d2i76a2          80 AVLVHCSGFL   89 (153)
T ss_dssp             CCEEECCSSS
T ss_pred             eeeeecccch
Confidence            4677777653

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.71  E-value=2.2  Score=28.22  Aligned_cols=35  Identities=3%  Similarity=-0.014  Sum_probs=22.2

Q ss_pred             EEEEEcC-CchHHHHHHHHHHHc----CCEEEEEecChhh
Q 030706           82 NVLITGS-TKGIGYALAKEFLKA----GDNVIICSRSAER  116 (173)
Q Consensus        82 ~~lItGa-~~gIG~aia~~l~~~----G~~V~~~~r~~~~  116 (173)
                      .+.|.|| +.|.+..++.-+...    +.++++.|.+++.
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            3566675 456666665555543    2489999987754

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.62  E-value=4.4  Score=26.39  Aligned_cols=75  Identities=11%  Similarity=0.026  Sum_probs=39.0

Q ss_pred             EEEEEcCCchHHHHHHHH-HHH-----cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706           82 NVLITGSTKGIGYALAKE-FLK-----AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK  155 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~-l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  155 (173)
                      ++.|.||++ +|...+.. ++.     .+.++++.|.++++.+............ .... ..- ++.+   +       
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~-~~~~-~~t-~~~~---~-------   67 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKD-RFKV-LIS-DTFE---G-------   67 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTT-SSEE-EEC-SSHH---H-------
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhcc-CceE-EEe-cCcc---c-------
Confidence            366778743 55444432 222     1358999999988776543332222222 1111 111 2221   1       


Q ss_pred             hcCCccEEEEcccCC
Q 030706          156 NLKYVDIWVFMSDLH  170 (173)
Q Consensus       156 ~~g~id~lVn~AG~~  170 (173)
                      ....-|++|+.||..
T Consensus        68 ~l~~aDvVVita~~~   82 (162)
T d1up7a1          68 AVVDAKYVIFQFRPG   82 (162)
T ss_dssp             HHTTCSEEEECCCTT
T ss_pred             ccCCCCEEEEecccC
Confidence            113679999999864

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=80.55  E-value=3.2  Score=30.37  Aligned_cols=42  Identities=29%  Similarity=0.425  Sum_probs=28.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHH
Q 030706           79 PPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQS  123 (173)
Q Consensus        79 ~~k~~lItGa~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~  123 (173)
                      ..|.+||.|+++|.   +++++++.  ..+|.++..+++-.+-..+.
T Consensus        77 ~pk~VLiiG~G~G~---~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~  120 (312)
T d1uira_          77 EPKRVLIVGGGEGA---TLREVLKHPTVEKAVMVDIDGELVEVAKRH  120 (312)
T ss_dssp             CCCEEEEEECTTSH---HHHHHTTSTTCCEEEEEESCHHHHHHHHHH
T ss_pred             CcceEEEeCCCchH---HHHHHHhcCCcceEEEecCCHHHHHHHHhc
Confidence            35789999987653   44555554  35899999988765544433

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.52  E-value=1.6  Score=27.70  Aligned_cols=38  Identities=18%  Similarity=0.374  Sum_probs=31.0

Q ss_pred             CCCCCEEEEEcCC---chHHHHHHHHHHHcC-CEEEEEecCh
Q 030706           77 MLPPYNVLITGST---KGIGYALAKEFLKAG-DNVIICSRSA  114 (173)
Q Consensus        77 ~~~~k~~lItGa~---~gIG~aia~~l~~~G-~~V~~~~r~~  114 (173)
                      .+..|++.|.|++   +.+|..+.+.|.+.| .+|+.+....
T Consensus         5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~   46 (129)
T d2csua1           5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE   46 (129)
T ss_dssp             TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC
T ss_pred             hCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc
Confidence            4677999999998   789999999988766 6898876543

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=80.50  E-value=1.5  Score=29.66  Aligned_cols=36  Identities=14%  Similarity=0.264  Sum_probs=29.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (173)
Q Consensus        77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~  113 (173)
                      .+.||.++|.|++. =|..+|..+++.+++++.+.|.
T Consensus        29 ~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          29 DFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCEEEEECCCc-cHHHHHHHHHhhhccccccccc
Confidence            47899999998754 4788999999999988777654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=80.47  E-value=0.37  Score=32.19  Aligned_cols=84  Identities=15%  Similarity=0.148  Sum_probs=51.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEE-EEecChhh-HHHHHHH--------------HHHHhCCceEEEEEeeCCCHH
Q 030706           82 NVLITGSTKGIGYALAKEFLKA-GDNVI-ICSRSAER-VDSAVQS--------------LREEFGEQHVWGTKCDVSEGN  144 (173)
Q Consensus        82 ~~lItGa~~gIG~aia~~l~~~-G~~V~-~~~r~~~~-~~~~~~~--------------l~~~~~~~~~~~~~~Dv~~~~  144 (173)
                      .+.|.|++|-+|+++++.+.+. +..++ .+++.... ......+              +.....  ... +..|++.++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~--~~D-ViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DFD-VFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SCS-EEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhc--ccc-eEEEeccHH
Confidence            5899999999999999998886 45654 33442211 0000000              000000  111 347999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccCC
Q 030706          145 EVADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       145 ~v~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      .+...++.+.+.  ++.+||=..|+.
T Consensus        83 ~~~~~~~~a~~~--~~~~ViGTTG~~  106 (162)
T d1diha1          83 GTLNHLAFCRQH--GKGMVIGTTGFD  106 (162)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCCC
T ss_pred             HHHHHHHHHHhc--cceeEEecCCCc
Confidence            999988876655  677777666653

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=80.32  E-value=2.5  Score=30.82  Aligned_cols=63  Identities=10%  Similarity=0.008  Sum_probs=33.2

Q ss_pred             CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHH---HHHHHHHHHhcCCccEEEEcccCC
Q 030706          104 GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEV---ADLVAFAQKNLKYVDIWVFMSDLH  170 (173)
Q Consensus       104 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v---~~~~~~~~~~~g~id~lVn~AG~~  170 (173)
                      |++|+.++............+.+..+   . ++.-...++.-+   ..+..++.++.+.+|.+|..+|-.
T Consensus       121 Ga~vi~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~G  186 (331)
T d1tdja1         121 GGEVLLHGANFDEAKAKAIELSQQQG---F-TWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGG  186 (331)
T ss_dssp             SCEEECCCSSHHHHHHHHHHHHHHHC---C-EECCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSS
T ss_pred             CCEEEEcCcccccchhhhhhhhhcCC---C-ccccccCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChh
Confidence            45555444443333333333333322   1 222334444433   345667778888999999988753

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=80.21  E-value=1.1  Score=30.37  Aligned_cols=31  Identities=23%  Similarity=0.252  Sum_probs=26.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (173)
Q Consensus        83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~  114 (173)
                      ++|.|| |-.|...|..+++.|.+|+++++..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            677776 5679999999999999999998753