Citrus Sinensis ID: 030772

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
Protein Sequence
MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIEEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI
Secondary Structure (PSIPRED)
cccHHHHcHHHHHHHcccccccccccccccccccccccccccHHHHHHHcccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHcccccccccccEccccccccccHcccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHEcccccEEEccccEEEccccccccccccccHHHHHHHHHHHHccEEEEHHHccc
Coil and Loop (DISEMBL)
meqesqkrkleetshetqntpiycanncgffgsantnnlCSKCYKDYllkqsknpnpspieeeknknktnieqneanpvggvvenrdpaaQVVVVdegassenpekrpanrcsfcrkrigltgfkcrceqtfcslhrysdkhncvfdyksagqdaiakanpvvkadkieki
Flexible Loop (DISEMBL)
meqesqkrkleetshetqntpIYCANNCGFFGSANTNNLCSKCYKDYLLKqsknpnpspieeeknknktnieqneanpvggvvenrDPAAQVVVVdegassenpekrpanrcsFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAgqdaiakanpvvkadkieki
Low Complexity Region (SEG)
MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIeeeknknktnieqneANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI
Disordered region (IsUnstruct)
********************PIYCANNCGFFGSANTNNLCSKCYKDYLL*************************************************************RCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAI***************
Disordered Region (DISOPRED)
**************************NCGFFGSANTNNL************************KNKNKTNIEQNEANPVGG*******************************SFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI
Disordered Region (DISEMBL)
*****************QNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIEEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVVD*************NRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI
Disordered Region (DISPRO)
*******************TPIYCANNCGFFGSANTNNLCSKCYKDYLLKQS********************************************************ANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIEEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	171	2.2.26 [Sep-21-2011]
Q7Y1W9	161	Zinc finger A20 and AN1 d	yes	no	0.912	0.968	0.488	5e-39
Q852K5	160	Zinc finger A20 and AN1 d	no	no	0.935	1.0	0.479	2e-38
A3BDI8	171	Zinc finger A20 and AN1 d	no	no	0.935	0.935	0.473	3e-35
A2YEZ6	171	Zinc finger A20 and AN1 d	N/A	no	0.935	0.935	0.473	3e-35
Q6H7P8	173	Zinc finger A20 and AN1 d	no	no	0.883	0.872	0.481	4e-34
Q9SJM6	161	Zinc finger A20 and AN1 d	yes	no	0.865	0.919	0.436	2e-31
Q942F8	148	Zinc finger A20 and AN1 d	no	no	0.847	0.979	0.419	4e-31
Q6NNI8	168	Zinc finger A20 and AN1 d	no	no	0.883	0.898	0.418	2e-29
O49663	176	Zinc finger A20 and AN1 d	no	no	0.883	0.857	0.443	4e-28
Q9ZNU9	163	Zinc finger A20 and AN1 d	no	no	0.859	0.901	0.411	5e-28

>sp|Q7Y1W9|SAP9_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1

 Score =  160 bits (404), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 86/176 (48%), Positives = 115/176 (65%), Gaps = 20/176 (11%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           M QES K + EET H T   PI C NNCGFFGS+ TNN+CSKCY+D++   +     +P+
Sbjct: 1   MAQESWKNESEETVH-TPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMA---APV 56

Query: 61  EEEK-----NKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFC 115
            E+K     + +KT +E  + + V        PAA    V++  +++ P K P+NRC  C
Sbjct: 57  VEKKAFTPASSSKTPLEPAKPDEV--------PAA---AVEDKQAAQEPPKPPSNRCLSC 105

Query: 116 RKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           RK++GLTGF+CRC  TFCS HRY++ H+C FDYK AG+D IAK NPVV A+KI KI
Sbjct: 106 RKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161

May be involved in environmental stress response.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q852K5|SAP6_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1

 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/171 (47%), Positives = 104/171 (60%), Gaps = 11/171 (6%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           M QES K++ EET   T   PI C NNCGFFGS  T N+CSKCY+D +    K    + +
Sbjct: 1   MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTV----KAKTVATV 56

Query: 61  EEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIG 120
            E+K      +    + P+  V E  D  +  V   +    E+  K P+NRC  CRK++G
Sbjct: 57  VEKKP-----LASLSSTPL--VTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVG 109

Query: 121 LTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           LTGFKCRC  TFCS+HRY+D H C FDYK  G++ IAK NP+VKADKI KI
Sbjct: 110 LTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A3BDI8|SAP8_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1

 Score =  147 bits (372), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/169 (47%), Positives = 105/169 (62%), Gaps = 9/169 (5%)

Query: 11  EETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKN----PNPSPIEEEKNK 66
           +ET  +    PI C NNCGFFGSA T N+CSKC+K+ ++KQ +      +   I    + 
Sbjct: 4   KETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDS 63

Query: 67  NKTNIEQNEANPVGGVVENRDPAAQ---VVVVDEGASSENPEKRPA-NRCSFCRKRIGLT 122
            K  I    A      VE +   AQ   +    EG +  NP+ R   NRCS CRKR+GLT
Sbjct: 64  GKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTV-NPKGREGPNRCSTCRKRVGLT 122

Query: 123 GFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           GF CRC   +C++HRYSDKH+C FDY++A +DAIAKANPVVKA+K++KI
Sbjct: 123 GFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2

 Score =  147 bits (372), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/169 (47%), Positives = 105/169 (62%), Gaps = 9/169 (5%)

Query: 11  EETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKN----PNPSPIEEEKNK 66
           +ET  +    PI C NNCGFFGSA T N+CSKC+K+ ++KQ +      +   I    + 
Sbjct: 4   KETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDS 63

Query: 67  NKTNIEQNEANPVGGVVENRDPAAQ---VVVVDEGASSENPEKRPA-NRCSFCRKRIGLT 122
            K  I    A      VE +   AQ   +    EG +  NP+ R   NRCS CRKR+GLT
Sbjct: 64  GKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTV-NPKGREGPNRCSTCRKRVGLT 122

Query: 123 GFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           GF CRC   +C++HRYSDKH+C FDY++A +DAIAKANPVVKA+K++KI
Sbjct: 123 GFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171

May be involved in environmental stress response.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q6H7P8|SAP4_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1

 Score =  144 bits (362), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/160 (48%), Positives = 98/160 (61%), Gaps = 9/160 (5%)

Query: 21  PIYCANNCGFFGSANTNNLCSKCYKDYLLKQSK-NPNPSPIEEEKNKNKTNIEQNEANPV 79
           PI C NNCGFFGSA T N+CSKC+K+ ++K+ +     S I+   N      E   A   
Sbjct: 14  PILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASG 73

Query: 80  GGVVENRDPAAQVVVV---DEGASSENPEKRPA-----NRCSFCRKRIGLTGFKCRCEQT 131
              V      A+ +VV   D   +SE     P      NRC+ CRKR+GLTGF CRC   
Sbjct: 74  STAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNM 133

Query: 132 FCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           +C+LHRYSDKH C FDY++A +DAIAKANPVVKA+K++KI
Sbjct: 134 YCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SJM6|SAP4_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1

 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 100/172 (58%), Gaps = 24/172 (13%)

Query: 11  EETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIEEEKNKNKTN 70
           EE   ET      C NNCGFFGS+ T NLCS CY D  LKQ          +++   K+ 
Sbjct: 3   EEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQ----------QQQASMKST 52

Query: 71  IEQNEANPVGGVVENRDPAAQVVVVDEGASSE-----------NPEKRPANRCSFCRKRI 119
           +E + +  +  V+EN   AA++ +     + E           +P +RP NRC+ CRKR+
Sbjct: 53  VESSLSPVIAPVLENY--AAELEIPTTKKTEEKKPIQIPTEQPSPPQRP-NRCTVCRKRV 109

Query: 120 GLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           GLTGF CRC  TFC  HRY + H C FD+KSAG++ IAKANP+V A K++KI
Sbjct: 110 GLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q942F8|SAP2_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Oryza sativa subsp. japonica GN=SAP2 PE=2 SV=1

 Score =  134 bits (336), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 103/174 (59%), Gaps = 29/174 (16%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           MEQ S++        + +  P+ CAN CGFFGSA+T  LCSKCY+  ++ Q+  P+ +  
Sbjct: 1   MEQGSER--------QDERPPLPCANGCGFFGSADTRGLCSKCYRQTVMSQASAPSAAAQ 52

Query: 61  EEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPA---NRCSFCRK 117
             E ++               VV    PA + V VDEGA    P +  A   +RC+ C +
Sbjct: 53  SAEHDQ---------------VVL---PAPEGVPVDEGAMPPPPPRHGAKTKSRCAACGR 94

Query: 118 RIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
            +GL GF+CRC   FC  HRYSD+H+C +DY+ AG+DAIA+ANPVV+ DK+EK+
Sbjct: 95  SVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVEKL 148

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6NNI8|SAP1_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 92/153 (60%), Gaps = 2/153 (1%)

Query: 21  PIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNP-SPIEEEKNKNKTNIEQNEANPV 79
           P  C   CGFFGS +  NLCSKCY+D    + +  +  + +E+  N NK   +  ++  +
Sbjct: 16  PKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEI 75

Query: 80  G-GVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRY 138
             GV+ +   ++     D  A+  +P K  A RC  C K++G+TGFKCRC  TFC  HRY
Sbjct: 76  TQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRY 135

Query: 139 SDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
            + H C FD+K   ++AIAKANPVVKADK+++I
Sbjct: 136 PESHECQFDFKGVAREAIAKANPVVKADKVDRI 168

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|O49663|SAP9_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1

 Score =  124 bits (310), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 90/158 (56%), Gaps = 7/158 (4%)

Query: 21  PIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIEEEKNKNKTNIEQNEANPVG 80
           P  C   CGFFGS +  +LCSKCY+    ++++        E+  K         A P  
Sbjct: 19  PKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLFIAEPPA 78

Query: 81  GVVENRDPAAQVVVVD-EGASSENPE----KRPA--NRCSFCRKRIGLTGFKCRCEQTFC 133
            VVE +   A VVVV  E +SS  PE     RPA  NRC  C K++G+ GFKC+C  TFC
Sbjct: 79  VVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFC 138

Query: 134 SLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
             HRY + H+C FD+K  G+  IAKANPVVKADKI++ 
Sbjct: 139 GEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQRF 176

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZNU9|SAP3_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1

 Score =  123 bits (309), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 91/158 (57%), Gaps = 11/158 (6%)

Query: 21  PIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIEEEKNKNKTNIEQNEANPVG 80
           P  CANNCGFFGS  T NLCSKC++D    Q +  N S  +    ++   +    ++ V 
Sbjct: 10  PRLCANNCGFFGSTATQNLCSKCFRDL---QHQEQNSSTAKHALTQSLAAVGAAASSSVS 66

Query: 81  GVVENRDPAAQVV-------VVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFC 133
                   + ++V          E   ++ P + P  RC  CR+R+G+TGF+CRC   FC
Sbjct: 67  PPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDP-KRCLTCRRRVGITGFRCRCGFVFC 125

Query: 134 SLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
             HRY+++H C FD+K  G+D IAKANP+VKADK+EKI
Sbjct: 126 GTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
225438507	141	PREDICTED: zinc finger A20 and AN1 domai	0.824	1.0	0.614	2e-49
116787141	162	unknown [Picea sitchensis] gi|224285792|	0.947	1.0	0.491	5e-39
302822895	176	hypothetical protein SELMODRAFT_187216 [	1.0	0.971	0.471	3e-38
168018442	162	predicted protein [Physcomitrella patens	0.935	0.987	0.502	1e-37
115470773	161	Os07g0168800 [Oryza sativa Japonica Grou	0.912	0.968	0.488	2e-37
218193889	205	hypothetical protein OsI_13859 [Oryza sa	0.935	0.780	0.485	3e-37
222625949	205	hypothetical protein OsJ_12913 [Oryza sa	0.935	0.780	0.479	8e-37
115455853	160	Os03g0792900 [Oryza sativa Japonica Grou	0.935	1.0	0.479	1e-36
326496248	160	predicted protein [Hordeum vulgare subsp	0.906	0.968	0.471	3e-36
116791002	170	unknown [Picea sitchensis]	0.976	0.982	0.494	4e-36

>gi|225438507|ref|XP_002279037.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 9 [Vitis vinifera] gi|147792975|emb|CAN73104.1| hypothetical protein VITISV_042893 [Vitis vinifera]

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 30/171 (17%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           MEQ+SQ+ ++        N  I CANNCGFFGSA TNNLCSKCYK++++KQSK       
Sbjct: 1   MEQKSQENEV--------NAAILCANNCGFFGSAATNNLCSKCYKEFVIKQSK------- 45

Query: 61  EEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIG 120
                  + ++ +NE N VG   EN         ++EGA++ +PEK PANRCSFCRKR+G
Sbjct: 46  -------EASVVENENNTVG---ENSGSG-----IEEGAAAGSPEKCPANRCSFCRKRVG 90

Query: 121 LTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           LTGFKCRC QTFCS+HRYSDKHNCVFDYKSA QDAIAKANPVVKADKIEKI
Sbjct: 91  LTGFKCRCGQTFCSMHRYSDKHNCVFDYKSAAQDAIAKANPVVKADKIEKI 141

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116787141|gb|ABK24386.1| unknown [Picea sitchensis] gi|224285792|gb|ACN40611.1| unknown [Picea sitchensis]

 Score =  165 bits (418), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 84/171 (49%), Positives = 115/171 (67%), Gaps = 9/171 (5%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           M Q++ K   E T ++ Q  PI CAN+CGFFGS++T N CSKC+KD +LKQ+ +   + +
Sbjct: 1   MAQDNWKGDSEGTGYQPQEDPILCANSCGFFGSSSTMNFCSKCFKDLVLKQALS---AAV 57

Query: 61  EEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIG 120
            E  + +   ++Q    PV    +   PA   +   EG SS    K PANRC++C+KR+G
Sbjct: 58  VEISSGSALGLQQ----PVQIADQLARPA--TLEQGEGTSSGEQPKPPANRCTYCKKRVG 111

Query: 121 LTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           LTGFKCRC  TFCSLHRYS+ H+C+FDY+ AG++ I K NPVVKA+KI+KI
Sbjct: 112 LTGFKCRCGDTFCSLHRYSETHDCLFDYRKAGRETIRKENPVVKAEKIDKI 162

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302822895|ref|XP_002993103.1| hypothetical protein SELMODRAFT_187216 [Selaginella moellendorffii] gi|300139103|gb|EFJ05851.1| hypothetical protein SELMODRAFT_187216 [Selaginella moellendorffii]

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/176 (47%), Positives = 106/176 (60%), Gaps = 5/176 (2%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           M QES KR+ E    +    P+ CANNCGFFGS  T NLCSKCY++    ++     +  
Sbjct: 1   MAQESWKREEEAAGCQLPEGPVLCANNCGFFGSVATMNLCSKCYREQSSSKAAETMITTT 60

Query: 61  EEEKNKNKTNIEQNEANPVGGVVENRDP-----AAQVVVVDEGASSENPEKRPANRCSFC 115
                   T     +   +  +  +R        A  +V ++ +S+   + R  NRC  C
Sbjct: 61  TTTAAACATATPAAKEEALAAIATSRTSTTIATGATTLVTEDDSSASQEKPRLPNRCLAC 120

Query: 116 RKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           RKR+GLTGFKCRC   FCS+HRYSDKHNC FDYK+AG++AIAKANPVVKADKIEKI
Sbjct: 121 RKRLGLTGFKCRCGDVFCSMHRYSDKHNCSFDYKAAGREAIAKANPVVKADKIEKI 176

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168018442|ref|XP_001761755.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687126|gb|EDQ73511.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/173 (50%), Positives = 114/173 (65%), Gaps = 13/173 (7%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           M Q++ K++ EET+ +  + PI C NNCGFFGSA T  +CSKCY+D++L Q+K+ +    
Sbjct: 1   MAQDNWKQEKEETNCQAPDAPIMCTNNCGFFGSAVTLGMCSKCYRDFVLTQAKSSSGK-- 58

Query: 61  EEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEK-RP-ANRCSFCRKR 118
                      E+ +   +GG V              GAS+   +  RP A+RC  C+KR
Sbjct: 59  ---------GGEKGDTVYLGGHVGGGQTEGGGTSSGGGASASGGDACRPQAHRCFSCKKR 109

Query: 119 IGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           +GLTGFKCRC  TFCSLHRYSDKH+C FDYK+AG+DAIAKANPVVKADK++KI
Sbjct: 110 VGLTGFKCRCGNTFCSLHRYSDKHSCTFDYKTAGRDAIAKANPVVKADKVDKI 162

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115470773|ref|NP_001058985.1| Os07g0168800 [Oryza sativa Japonica Group] gi|75146195|sp|Q7Y1W9.1|SAP9_ORYSJ RecName: Full=Zinc finger A20 and AN1 domain-containing stress-associated protein 9; Short=OsSAP9 gi|30908921|gb|AAP37480.1| putative A20/AN1-type zinc finger protein ZFP177 [Oryza sativa Japonica Group] gi|50509728|dbj|BAD31780.1| putative zinc finger protein 216 [Oryza sativa Japonica Group] gi|113610521|dbj|BAF20899.1| Os07g0168800 [Oryza sativa Japonica Group] gi|125557371|gb|EAZ02907.1| hypothetical protein OsI_25046 [Oryza sativa Indica Group] gi|125599249|gb|EAZ38825.1| hypothetical protein OsJ_23237 [Oryza sativa Japonica Group] gi|215768443|dbj|BAH00672.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/176 (48%), Positives = 115/176 (65%), Gaps = 20/176 (11%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           M QES K + EET H T   PI C NNCGFFGS+ TNN+CSKCY+D++   +     +P+
Sbjct: 1   MAQESWKNESEETVH-TPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMA---APV 56

Query: 61  EEEK-----NKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFC 115
            E+K     + +KT +E  + + V        PAA    V++  +++ P K P+NRC  C
Sbjct: 57  VEKKAFTPASSSKTPLEPAKPDEV--------PAA---AVEDKQAAQEPPKPPSNRCLSC 105

Query: 116 RKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           RK++GLTGF+CRC  TFCS HRY++ H+C FDYK AG+D IAK NPVV A+KI KI
Sbjct: 106 RKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218193889|gb|EEC76316.1| hypothetical protein OsI_13859 [Oryza sativa Indica Group]

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 83/171 (48%), Positives = 105/171 (61%), Gaps = 11/171 (6%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           M QES K++ EET   T   PI C NNCGFFGS  T N+CSKCY+D +    K    + +
Sbjct: 46  MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTV----KAKTVATV 101

Query: 61  EEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIG 120
            E+K      +    + P+  V E  D  +  V   +    E+  K P+NRC  CRK++G
Sbjct: 102 VEKKP-----LASLSSTPL--VAEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVG 154

Query: 121 LTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           LTGFKCRC  TFCS+HRY+D H C FDYK AG++ IAK NP+VKADKI KI
Sbjct: 155 LTGFKCRCGGTFCSMHRYADSHKCTFDYKQAGREQIAKQNPLVKADKITKI 205

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222625949|gb|EEE60081.1| hypothetical protein OsJ_12913 [Oryza sativa Japonica Group]

 Score =  158 bits (399), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 82/171 (47%), Positives = 104/171 (60%), Gaps = 11/171 (6%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           M QES K++ EET   T   PI C NNCGFFGS  T N+CSKCY+D +    K    + +
Sbjct: 46  MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTV----KAKTVATV 101

Query: 61  EEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIG 120
            E+K      +    + P+  V E  D  +  V   +    E+  K P+NRC  CRK++G
Sbjct: 102 VEKKP-----LASLSSTPL--VTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVG 154

Query: 121 LTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           LTGFKCRC  TFCS+HRY+D H C FDYK  G++ IAK NP+VKADKI KI
Sbjct: 155 LTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 205

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115455853|ref|NP_001051527.1| Os03g0792900 [Oryza sativa Japonica Group] gi|75149663|sp|Q852K5.1|SAP6_ORYSJ RecName: Full=Zinc finger A20 and AN1 domain-containing stress-associated protein 6; Short=OsSAP6 gi|28269431|gb|AAO37974.1| putative zinc finger protein [Oryza sativa Japonica Group] gi|34978689|gb|AAQ83587.1| putative zinc finger transcription factor ZFP38 [Oryza sativa Japonica Group] gi|108711509|gb|ABF99304.1| AN1-like Zinc finger family protein, expressed [Oryza sativa Japonica Group] gi|108711510|gb|ABF99305.1| AN1-like Zinc finger family protein, expressed [Oryza sativa Japonica Group] gi|108711511|gb|ABF99306.1| AN1-like Zinc finger family protein, expressed [Oryza sativa Japonica Group] gi|113549998|dbj|BAF13441.1| Os03g0792900 [Oryza sativa Japonica Group] gi|347737111|gb|AEP20529.1| zinc finger protein [Oryza sativa Japonica Group]

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/171 (47%), Positives = 104/171 (60%), Gaps = 11/171 (6%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           M QES K++ EET   T   PI C NNCGFFGS  T N+CSKCY+D +    K    + +
Sbjct: 1   MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTV----KAKTVATV 56

Query: 61  EEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFCRKRIG 120
            E+K      +    + P+  V E  D  +  V   +    E+  K P+NRC  CRK++G
Sbjct: 57  VEKKP-----LASLSSTPL--VTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVG 109

Query: 121 LTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           LTGFKCRC  TFCS+HRY+D H C FDYK  G++ IAK NP+VKADKI KI
Sbjct: 110 LTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326496248|dbj|BAJ94586.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326514722|dbj|BAJ99722.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/176 (47%), Positives = 111/176 (63%), Gaps = 21/176 (11%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           M Q+S K    E + +T   PI C NNCGFFGS+ TNN+CSKCY+D++   +     +P+
Sbjct: 1   MTQDSWKE--SEETVQTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFIKATTI---AAPV 55

Query: 61  EEEK-----NKNKTNIEQNEANPVGGVVENRDPAAQVVVVDEGASSENPEKRPANRCSFC 115
            E+K     + +   +EQ +A+ VG V           +VD  A+ E P K P+NRC  C
Sbjct: 56  AEKKVFTVASSSNVTLEQAKADEVGAVP----------LVDSQAAQE-PPKPPSNRCLSC 104

Query: 116 RKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           RK++GLTGF+CRC  TFCS+HRY+D H C FDYK AG++ IAK NPVV  +KI KI
Sbjct: 105 RKKVGLTGFQCRCGGTFCSMHRYADSHECSFDYKKAGREQIAKQNPVVIGEKINKI 160

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116791002|gb|ABK25818.1| unknown [Picea sitchensis]

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/174 (49%), Positives = 106/174 (60%), Gaps = 7/174 (4%)

Query: 1   MEQESQKRKLEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
           M QES K   E+   +    P+ C+N CGFFGS+ T N+CSKCY+D+ L Q++       
Sbjct: 1   MAQESWKNMGEDRGRQPPGGPVLCSNKCGFFGSSATMNMCSKCYRDHFLAQTQASAVKSA 60

Query: 61  EEEKNKNKTNIEQNEANPVGGVVENRDPAAQV-VVVDEG--ASSENPEKRPANRCSFCRK 117
            E+      +  +       GV   R+PA  V    D+G   SSE P  R +NRC  CRK
Sbjct: 61  VEKSLSLDIDSSKALRFDASGV---RNPAEVVGSSSDDGNSVSSEEPP-RVSNRCQSCRK 116

Query: 118 RIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
           R+GLTGFKCRC   FCSLHRYSDKH C FDYK AG+  I KANPVVKA+KI+KI
Sbjct: 117 RVGLTGFKCRCGYVFCSLHRYSDKHGCSFDYKEAGRQEIEKANPVVKAEKIQKI 170

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
ZFIN|ZDB-GENE-040426-875	212	zfand5b "zinc finger, AN1-type	0.444	0.358	0.565	4.3e-32
RGD|1310776	213	Zfand5 "zinc finger, AN1-type	0.450	0.361	0.542	1.4e-31
ZFIN|ZDB-GENE-040426-1979	214	zfand5a "zinc finger, AN1-type	0.473	0.378	0.547	2.3e-31
UNIPROTKB|F1NJD4	212	ZFAND5 "Uncharacterized protei	0.450	0.363	0.542	2.3e-31
TAIR|locus:2008251	173	AT1G51200 [Arabidopsis thalian	0.883	0.872	0.446	2.6e-31
MGI|MGI:1278334	213	Zfand5 "zinc finger, AN1-type	0.450	0.361	0.542	3e-31
UNIPROTKB|A7MBA8	213	ZFAND5 "ZFAND5 protein" [Bos t	0.450	0.361	0.530	3.8e-31
UNIPROTKB|A4U9C9	213	LOC100737314 "Zinc finger prot	0.450	0.361	0.530	4.8e-31
GENEDB_PFALCIPARUM|PF08_0056	191	PF08_0056 "zinc finger protein	0.514	0.460	0.466	4.8e-31
UNIPROTKB|Q8IB20	191	PF08_0056 "Zinc finger protein	0.514	0.460	0.466	4.8e-31

ZFIN|ZDB-GENE-040426-875 zfand5b "zinc finger, AN1-type domain 5b" [Danio rerio (taxid:7955)]

 Score = 241 (89.9 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
 Identities = 43/76 (56%), Positives = 51/76 (67%)

Query:    96 DEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDA 155
             +E A +    K   NRC  CRK++GLTGF CRC   FC LHRYSDKHNC +DYK+     
Sbjct:   137 EEEAKTAGAPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAK 196

Query:   156 IAKANPVVKADKIEKI 171
             I K NPVV ADKI++I
Sbjct:   197 IRKENPVVVADKIQRI 212

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1310776 Zfand5 "zinc finger, AN1-type domain 5" [Rattus norvegicus (taxid:10116)]

 Score = 240 (89.5 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
 Identities = 45/83 (54%), Positives = 56/83 (67%)

Query:    95 VDEGASSENPEKRPA------NRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDY 148
             V + +SS++ EK P       NRC  CRK++GLTGF CRC   FC LHRYSDKHNC +DY
Sbjct:   131 VSQPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDY 190

Query:   149 KSAGQDAIAKANPVVKADKIEKI 171
             K+     I K NPVV A+KI++I
Sbjct:   191 KAEAAAKIRKENPVVVAEKIQRI 213

GO:0001701 "in utero embryonic development" evidence=IEA;ISO

GO:0001944 "vasculature development" evidence=IEA;ISO

GO:0003016 "respiratory system process" evidence=IEA;ISO

GO:0003677 "DNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA;ISO

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA;ISO

GO:0048705 "skeletal system morphogenesis" evidence=IEA;ISO

GO:0048745 "smooth muscle tissue development" evidence=IEA;ISO

GO:0060324 "face development" evidence=IEA;ISO

ZFIN|ZDB-GENE-040426-1979 zfand5a "zinc finger, AN1-type domain 5a" [Danio rerio (taxid:7955)]

 Score = 247 (92.0 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
 Identities = 46/84 (54%), Positives = 55/84 (65%)

Query:    88 PAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFD 147
             P AQ    ++ A S +  K   NRC  CRKR+GLTGF CRC   FC +HRYSDKHNC +D
Sbjct:   134 PVAQA---NDDAKSPDSSKPKKNRCFTCRKRVGLTGFDCRCGNLFCGIHRYSDKHNCTYD 190

Query:   148 YKSAGQDAIAKANPVVKADKIEKI 171
             YK+     I K NPVV ADKI++I
Sbjct:   191 YKAEAAAKIRKENPVVVADKIQRI 214

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1NJD4 ZFAND5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 242 (90.2 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
 Identities = 45/83 (54%), Positives = 56/83 (67%)

Query:    95 VDEGASSENPEKRPA------NRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDY 148
             V + ++S+N EK P       NRC  CRK++GLTGF CRC   FC LHRYSDKHNC +DY
Sbjct:   130 VSQPSTSQNEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDY 189

Query:   149 KSAGQDAIAKANPVVKADKIEKI 171
             K+     I K NPVV A+KI++I
Sbjct:   190 KAEAAAKIRKENPVVVAEKIQRI 212

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0060324 "face development" evidence=IEA

TAIR|locus:2008251 AT1G51200 [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 71/159 (44%), Positives = 93/159 (58%)

Query:    21 PIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPN-PSPIXXXXXXXXXXXXXXXANPV 79
             P  C NNCGFFGSA T N+CSKC+KD L +Q +     S +               A  V
Sbjct:    15 PKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGTSSSSNIIKETFTAALV 74

Query:    80 GGVVENRDPA------AQVVVVDEGASSENPEK-RPANRCSFCRKRIGLTGFKCRCEQTF 132
                 ++ +P       + V VV E  + E   K +  +RC+ C KR+GLTGFKCRC   F
Sbjct:    75 DIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLF 134

Query:   133 CSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
             C  HRY+D H+C F+Y +A Q+AIAKANPVVKA+K++KI
Sbjct:   135 CGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0007067 "mitosis" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

MGI|MGI:1278334 Zfand5 "zinc finger, AN1-type domain 5" [Mus musculus (taxid:10090)]

 Score = 240 (89.5 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
 Identities = 45/83 (54%), Positives = 56/83 (67%)

Query:    95 VDEGASSENPEKRPA------NRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDY 148
             V + +SS++ EK P       NRC  CRK++GLTGF CRC   FC LHRYSDKHNC +DY
Sbjct:   131 VSQPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDY 190

Query:   149 KSAGQDAIAKANPVVKADKIEKI 171
             K+     I K NPVV A+KI++I
Sbjct:   191 KAEAAAKIRKENPVVVAEKIQRI 213

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0001944 "vasculature development" evidence=IMP

GO:0003016 "respiratory system process" evidence=IMP

GO:0003677 "DNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IMP

GO:0048705 "skeletal system morphogenesis" evidence=IMP

GO:0048745 "smooth muscle tissue development" evidence=IMP

GO:0060324 "face development" evidence=IMP

UNIPROTKB|A7MBA8 ZFAND5 "ZFAND5 protein" [Bos taurus (taxid:9913)]

 Score = 237 (88.5 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
 Identities = 44/83 (53%), Positives = 56/83 (67%)

Query:    95 VDEGASSENPEKRPA------NRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDY 148
             V + ++S++ EK P       NRC  CRK++GLTGF CRC   FC LHRYSDKHNC +DY
Sbjct:   131 VSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDY 190

Query:   149 KSAGQDAIAKANPVVKADKIEKI 171
             K+     I K NPVV A+KI++I
Sbjct:   191 KAEAAAKIRKENPVVVAEKIQRI 213

GO:0060324 "face development" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|A4U9C9 LOC100737314 "Zinc finger protein 216" [Sus scrofa (taxid:9823)]

 Score = 237 (88.5 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
 Identities = 44/83 (53%), Positives = 56/83 (67%)

Query:    95 VDEGASSENPEKRPA------NRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDY 148
             V + ++S++ EK P       NRC  CRK++GLTGF CRC   FC LHRYSDKHNC +DY
Sbjct:   131 VSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDY 190

Query:   149 KSAGQDAIAKANPVVKADKIEKI 171
             K+     I K NPVV A+KI++I
Sbjct:   191 KAEAAAKIRKENPVVVAEKIQRI 213

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GENEDB_PFALCIPARUM|PF08_0056 PF08_0056 "zinc finger protein, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 228 (85.3 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
 Identities = 42/90 (46%), Positives = 55/90 (61%)

Query:    84 ENRDPAAQVVVVDEGASSENPEK--RPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDK 141
             +N++   Q V +D     +N  +     ++C FC KRIGL G KCRC   FCSLHRY+D 
Sbjct:   102 QNKESEMQPVTLDNTEEKDNSSQPVEDKSKCFFCSKRIGLVGIKCRCNHYFCSLHRYADA 161

Query:   142 HNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
             HNC FDYK+  +  + K N  V ADK+EKI
Sbjct:   162 HNCTFDYKNYHKQQLIKNNVKVVADKVEKI 191

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8IB20 PF08_0056 "Zinc finger protein, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 228 (85.3 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
 Identities = 42/90 (46%), Positives = 55/90 (61%)

Query:    84 ENRDPAAQVVVVDEGASSENPEK--RPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDK 141
             +N++   Q V +D     +N  +     ++C FC KRIGL G KCRC   FCSLHRY+D 
Sbjct:   102 QNKESEMQPVTLDNTEEKDNSSQPVEDKSKCFFCSKRIGLVGIKCRCNHYFCSLHRYADA 161

Query:   142 HNCVFDYKSAGQDAIAKANPVVKADKIEKI 171
             HNC FDYK+  +  + K N  V ADK+EKI
Sbjct:   162 HNCTFDYKNYHKQQLIKNNVKVVADKVEKI 191

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7Y1W9	SAP9_ORYSJ	No assigned EC number	0.4886	0.9122	0.9689	yes	no
Q9SJM6	SAP4_ARATH	No assigned EC number	0.4360	0.8654	0.9192	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	171
smart00154	39	smart00154, ZnF_AN1, AN1-like Zinc finger	7e-12
pfam01428	43	pfam01428, zf-AN1, AN1-like Zinc finger	3e-09
pfam01754	25	pfam01754, zf-A20, A20-like zinc finger	2e-07
smart00259	26	smart00259, ZnF_A20, A20-like zinc fingers	5e-04

>gnl|CDD|197545 smart00154, ZnF_AN1, AN1-like Zinc finger

 Score = 56.6 bits (137), Expect = 7e-12
 Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 112 CSFCRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVFDYK 149
           C FCRK++GLTGFKCR C   FC  HR  + H+C  DYK
Sbjct: 1   CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK 39

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. Length = 39

>gnl|CDD|201791 pfam01428, zf-AN1, AN1-like Zinc finger

 Score = 49.8 bits (119), Expect = 3e-09
 Identities = 22/44 (50%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 112 CSF--CRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVFDYKSAG 152
           CSF  C+K+  L  FKCR C  TFC  HR  + HNC   YKS  
Sbjct: 1   CSFKGCKKKDFL-PFKCRFCGGTFCLKHRLPEDHNCPGLYKSKA 43

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Length = 43

>gnl|CDD|201955 pfam01754, zf-A20, A20-like zinc finger

 Score = 44.9 bits (107), Expect = 2e-07
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 21 PIYCANNCGFFGSANTNNLCSKCYK 45
          P+ C   CGF+GS  T  LCSKCY+
Sbjct: 1  PLKCTPGCGFYGSPATEGLCSKCYR 25

The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding Domain. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. Length = 25

>gnl|CDD|128555 smart00259, ZnF_A20, A20-like zinc fingers

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)

Query: 21 PIYCA-NNCGFFGSANTNNLCSKCYK 45
          PI C    CGFFG+  T  LCSKC+K
Sbjct: 1  PIKCRRPGCGFFGNPATEGLCSKCFK 26

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation. Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	171
KOG3173	167	consensus Predicted Zn-finger protein [General fun	100.0
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	99.55
PF01754	25	zf-A20: A20-like zinc finger; InterPro: IPR002653	99.52
smart00259	26	ZnF_A20 A20-like zinc fingers. A20- (an inhibitor	99.45
PF01428	43	zf-AN1: AN1-like Zinc finger; InterPro: IPR000058	99.09
COG3582	162	Predicted nucleic acid binding protein containing	96.38
KOG3183	250	consensus Predicted Zn-finger protein [General fun	96.35
PF01363	69	FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f	94.61
KOG3183	250	consensus Predicted Zn-finger protein [General fun	93.2
cd00065	57	FYVE FYVE domain; Zinc-binding domain; targets pro	92.84
smart00064	68	FYVE Protein present in Fab1, YOTB, Vac1, and EEA1	92.37
KOG4345	774	consensus NF-kappa B regulator AP20/Cezanne [Signa	91.06
KOG1818	634	consensus Membrane trafficking and cell signaling	89.7
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	87.6
PF15135	278	UPF0515: Uncharacterised protein UPF0515	81.38
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	80.99

>KOG3173 consensus Predicted Zn-finger protein [General function prediction only]

Probab=100.00  E-value=9.6e-47  Score=305.28  Aligned_cols=149  Identities=46%  Similarity=0.900  Sum_probs=104.2

Q ss_pred             CccccccCCCCCCCcCCCcchhhhhHHHHhhhcCC-CCCCCcccccccCCcccccCCCCCCcccccCCCCccccccc--c
Q 030772           20 TPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKN-PNPSPIEEEKNKNKTNIEQNEANPVGGVVENRDPAAQVVVV--D   96 (171)
Q Consensus        20 ~p~lC~ngCGFfGs~at~nlCSkCyr~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   96 (171)
                      .++||+|||||||+|+|+||||+||++++.++++. ..++..+...++.+.  +.....+.+...+..... +.+..  .
T Consensus        14 ~~~lc~~gCGf~G~p~~~n~CSkC~~e~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~-~~~~~~~~   90 (167)
T KOG3173|consen   14 QDLLCVNGCGFYGSPATENLCSKCYRDHLLRQQQKQARASPPVESSLSSPR--SVPSRDPPAVSLESTTES-ELKLVSDT   90 (167)
T ss_pred             cccccccCccccCChhhccHHHHHHHHHHHHhhhccccccCcccccccCcc--ccCccccccccccccccc-cccccccC
Confidence            46999999999999999999999999999887665 333322221111001  000011111111111110 11000  0


Q ss_pred             CC--CCCCCCCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhHHHHHHhCCcccccccccC
Q 030772           97 EG--ASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI  171 (171)
Q Consensus        97 ~~--~~~~~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~NP~v~~~Kl~kI  171 (171)
                      +.  ..........++||+.|+|||||+||.||||++||+.|||||.|+|+||||.+||+.|+++||+|+++||+||
T Consensus        91 ~s~~~~~~~~~~~~~~rC~~C~kk~gltgf~CrCG~~fC~~HRy~e~H~C~fDyK~~gr~~i~k~nP~v~a~k~~ki  167 (167)
T KOG3173|consen   91 PSTEEEDEESKPKKKKRCFKCRKKVGLTGFKCRCGNTFCGTHRYPEQHDCSFDYKQAGREKIAKANPVVKADKLQKI  167 (167)
T ss_pred             CcccccccccccccchhhhhhhhhhcccccccccCCcccccccCCccccccccHHHHHHHHHHHhCCeeeccccccC
Confidence            10  0112344566889999999999999999999999999999999999999999999999999999999999998

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=99.55  E-value=1.7e-15  Score=96.50  Aligned_cols=38  Identities=61%  Similarity=1.388  Sum_probs=36.9

Q ss_pred             ccccccccccccceee-cCccccCCcCCCCCCCCCccch
Q 030772          112 CSFCRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVFDYK  149 (171)
Q Consensus       112 C~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  149 (171)
                      |+.|+++++|++|+|+ |+++||..|||||.|+|++|||
T Consensus         1 C~~C~~~~~l~~f~C~~C~~~FC~~HR~~e~H~C~~~~k   39 (39)
T smart00154        1 CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK   39 (39)
T ss_pred             CcccCCcccccCeECCccCCccccccCCccccCCccccC
Confidence            7899999999999999 9999999999999999999996

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>PF01754 zf-A20: A20-like zinc finger; InterPro: IPR002653 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.52  E-value=4.3e-15  Score=86.91  Aligned_cols=25  Identities=68%  Similarity=1.497  Sum_probs=20.8

Q ss_pred             ccccccCCCCCCCcCCCcchhhhhH
Q 030772           21 PIYCANNCGFFGSANTNNLCSKCYK   45 (171)
Q Consensus        21 p~lC~ngCGFfGs~at~nlCSkCyr   45 (171)
                      |++|++|||||||++|+||||+|||
T Consensus         1 ~~~C~~gCgf~Gs~~~~~~Cs~C~~   25 (25)
T PF01754_consen    1 PSLCANGCGFYGSPATNGLCSKCYR   25 (25)
T ss_dssp             SSB-TTTSSSB-BGGGTTS-HHHHH
T ss_pred             CCcccCCCCCcccccccCcchhhcC
Confidence            5699999999999999999999997

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the zinc finger domain found in A20. A20 is an inhibitor of cell death that inhibits NF-kappaB activation via the tumour necrosis factor receptor associated factor pathway []. The zinc finger domains appear to mediate self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding, 0008270 zinc ion binding; PDB: 2FIF_F 2FID_B 2C7N_C 2C7M_A 2L00_A 2KZY_A 2EQG_A 2EQE_A 3OJ3_J 3OJ4_C ....

>smart00259 ZnF_A20 A20-like zinc fingers

Probab=99.45  E-value=1.9e-14  Score=84.83  Aligned_cols=25  Identities=60%  Similarity=1.384  Sum_probs=23.3

Q ss_pred             ccccc-cCCCCCCCcCCCcchhhhhH
Q 030772           21 PIYCA-NNCGFFGSANTNNLCSKCYK   45 (171)
Q Consensus        21 p~lC~-ngCGFfGs~at~nlCSkCyr   45 (171)
                      |++|+ +|||||||++|+||||+||+
T Consensus         1 ~~~C~~~~CgF~G~~~t~~~CskCy~   26 (26)
T smart00259        1 PIKCRRPGCGFFGNPATEGLCSKCFK   26 (26)
T ss_pred             CCccccCCCCCcCChhhcccCHhhcC
Confidence            45899 99999999999999999996

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation.

>PF01428 zf-AN1: AN1-like Zinc finger; InterPro: IPR000058 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.09  E-value=2.7e-11  Score=78.10  Aligned_cols=38  Identities=45%  Similarity=0.966  Sum_probs=28.2

Q ss_pred             ccc--cccccccccceee-cCccccCCcCCCCCCCCCccchH
Q 030772          112 CSF--CRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVFDYKS  150 (171)
Q Consensus       112 C~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  150 (171)
                      |..  |++++. ++|.|+ |+..||..|||||.|+|+++++.
T Consensus         1 C~~~~C~~~~~-~~~~C~~C~~~FC~~Hr~~e~H~C~~~~~~   41 (43)
T PF01428_consen    1 CSFPGCKKKDF-LPFKCKHCGKSFCLKHRLPEDHNCSKLQKK   41 (43)
T ss_dssp             -SSTTT--BCT-SHEE-TTTS-EE-TTTHSTTTCT-SSTTSC
T ss_pred             CccCcCcCccC-CCeECCCCCcccCccccCccccCCcchhhc
Confidence            455  999887 799999 99999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the AN1-type zinc finger domain, which has a dimetal (zinc)-bound alpha/beta fold. This domain was first identified as a zinc finger at the C terminus of AN1 Q91889 from SWISSPROT, a ubiquitin-like protein in Xenopus laevis []. The AN1-type zinc finger contains six conserved cysteines and two histidines that could potentially coordinate 2 zinc atoms. Certain stress-associated proteins (SAP) contain AN1 domain, often in combination with A20 zinc finger domains (SAP8) or C2H2 domains (SAP16) []. For example, the human protein Znf216 has an A20 zinc-finger at the N terminus and an AN1 zinc-finger at the C terminus, acting to negatively regulate the NFkappaB activation pathway and to interact with components of the immune response like RIP, IKKgamma and TRAF6. The interact of Znf216 with IKK-gamma and RIP is mediated by the A20 zinc-finger domain, while its interaction with TRAF6 is mediated by the AN1 zinc-finger domain; therefore, both zinc-finger domains are involved in regulating the immune response []. The AN1 zinc finger domain is also found in proteins containing a ubiquitin-like domain, which are involved in the ubiquitination pathway []. Proteins containing an AN1-type zinc finger include: Ascidian posterior end mark 6 (pem-6) protein []. Human AWP1 protein (associated with PRK1), which is expressed during early embryogenesis []. Human immunoglobulin mu binding protein 2 (SMUBP-2), mutations in which cause muscular atrophy with respiratory distress type 1 []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1WFP_A 1WYS_A 1WG2_A 1WFH_A 1X4W_A 1WFE_A 1WFL_A 1X4V_A.

>COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]

Probab=96.38  E-value=0.0017  Score=53.15  Aligned_cols=39  Identities=28%  Similarity=0.461  Sum_probs=30.1

Q ss_pred             ccccccccccc--ccceee-cCccccCCcCCCCCCCCCccch
Q 030772          111 RCSFCRKRIGL--TGFKCR-CEQTFCSLHRYSDKHNCVFDYK  149 (171)
Q Consensus       111 rC~~C~kkvgl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  149 (171)
                      +|..|-..++-  +.++|- |++.||+.||+++.|+|.+...
T Consensus        96 ~~a~~~~~g~~s~l~~~c~~c~g~fc~~h~lp~nhdc~~L~s  137 (162)
T COG3582          96 RCATPQCTGKGSTLAGKCNYCTGYFCAEHRLPENHDCNGLGS  137 (162)
T ss_pred             eeecceeccCCccccccccCCCCcceeceecccccccccHHH
Confidence            56544444333  358898 9999999999999999998854

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=96.35  E-value=0.0013  Score=56.99  Aligned_cols=40  Identities=33%  Similarity=0.894  Sum_probs=35.2

Q ss_pred             Cccc--ccccccccccceee-cCccccCCcCCCCCCCCCccchH
Q 030772          110 NRCS--FCRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVFDYKS  150 (171)
Q Consensus       110 ~rC~--~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  150 (171)
                      ..|.  .|+. |.++.|+|- |+.+||..||--+.|+|.+.|..
T Consensus         9 kHCs~~~Ckq-lDFLPf~Cd~C~~~FC~eHrsye~H~Cp~~~~~   51 (250)
T KOG3183|consen    9 KHCSVPYCKQ-LDFLPFKCDGCSGIFCLEHRSYESHHCPKGLRI   51 (250)
T ss_pred             cccCcchhhh-ccccceeeCCccchhhhccchHhhcCCCccccc
Confidence            4677  7776 799999999 99999999999999999988763

>PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.61  E-value=0.016  Score=39.55  Aligned_cols=29  Identities=34%  Similarity=0.828  Sum_probs=17.7

Q ss_pred             CCCcccccccccccc--cceee-cCccccCCc
Q 030772          108 PANRCSFCRKRIGLT--GFKCR-CEQTFCSLH  136 (171)
Q Consensus       108 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ....|..|+++.+|+  -..|| ||.+||+.+
T Consensus         8 ~~~~C~~C~~~F~~~~rrhhCr~CG~~vC~~C   39 (69)
T PF01363_consen    8 EASNCMICGKKFSLFRRRHHCRNCGRVVCSSC   39 (69)
T ss_dssp             G-SB-TTT--B-BSSS-EEE-TTT--EEECCC
T ss_pred             CCCcCcCcCCcCCCceeeEccCCCCCEECCch
Confidence            358999999999997  49999 999999754

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The FYVE zinc finger is named after four proteins that it has been found in: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two zinc ions []. The FYVE finger has eight potential zinc coordinating cysteine positions. Many members of this family also include two histidines in a motif R+HHC+XCG, where + represents a charged residue and X any residue. FYVE-type domains are divided into two known classes: FYVE domains that specifically bind to phosphatidylinositol 3-phosphate in lipid bilayers and FYVE-related domains of undetermined function []. Those that bind to phosphatidylinositol 3-phosphate are often found in proteins targeted to lipid membranes that are involved in regulating membrane traffic [, , ]. Most FYVE domains target proteins to endosomes by binding specifically to phosphatidylinositol-3-phosphate at the membrane surface. By contrast, the CARP2 FYVE-like domain is not optimized to bind to phosphoinositides or insert into lipid bilayers. FYVE domains are distinguished from other zinc fingers by three signature sequences: an N-terminal WxxD motif, a basic R(R/K)HHCR patch, and a C-terminal RVC motif. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0046872 metal ion binding; PDB: 1HYI_A 1JOC_B 1HYJ_A 1DVP_A 3ZYQ_A 4AVX_A 1VFY_A 3T7L_A 1X4U_A 1WFK_A ....

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=93.20  E-value=0.02  Score=49.68  Aligned_cols=43  Identities=33%  Similarity=0.753  Sum_probs=36.1

Q ss_pred             CCCCCCCCccc--ccccccccc-cceee-cCccccCCcCCCCCCCCC
Q 030772          103 NPEKRPANRCS--FCRKRIGLT-GFKCR-CEQTFCSLHRYSDKHNCV  145 (171)
Q Consensus       103 ~~~~~~~~rC~--~C~kkvgl~-gf~Cr-Cg~~FC~~HRy~e~H~C~  145 (171)
                      ...+...++|.  .|++++-|. .+.|+ ||..||-+||++-.|.|.
T Consensus        92 ~~~k~~t~kc~~~~c~k~~~~~~~~~c~~c~~~~c~khr~~~dhsc~  138 (250)
T KOG3183|consen   92 KKRKVFTNKCPVPRCKKTLTLANKITCSKCGRNFCLKHRHPLDHSCN  138 (250)
T ss_pred             hhcccccccCCchhhHHHHHHHHhhhhHhhcchhhhhccCCCCchhh
Confidence            33455667787  788988775 69999 999999999999999998

>cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1;

Probab=92.84  E-value=0.048  Score=35.69  Aligned_cols=28  Identities=43%  Similarity=0.854  Sum_probs=24.0

Q ss_pred             CCcccccccccccc--cceee-cCccccCCc
Q 030772          109 ANRCSFCRKRIGLT--GFKCR-CEQTFCSLH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++++++  ...|| ||.+||..+
T Consensus         2 ~~~C~~C~~~F~~~~rk~~Cr~Cg~~~C~~C   32 (57)
T cd00065           2 ASSCMGCGKPFTLTRRRHHCRNCGRIFCSKC   32 (57)
T ss_pred             cCcCcccCccccCCccccccCcCcCCcChHH
Confidence            36799999999996  69999 999999754

>smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1

Probab=92.37  E-value=0.072  Score=36.19  Aligned_cols=28  Identities=39%  Similarity=0.866  Sum_probs=24.1

Q ss_pred             CCcccccccccccc--cceee-cCccccCCc
Q 030772          109 ANRCSFCRKRIGLT--GFKCR-CEQTFCSLH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|++..+++  ...|| ||.+||+.+
T Consensus        10 ~~~C~~C~~~F~~~~rk~hCr~CG~i~C~~C   40 (68)
T smart00064       10 VSNCMGCGKEFNLTKRRHHCRNCGRIFCSKC   40 (68)
T ss_pred             CCcCcccCccccCcccccccccCCCCcChHH
Confidence            46799999999986  58899 999999754

The FYVE zinc finger is named after four proteins where it was first found: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two Zn2+ ions. The FYVE finger has eight potential zinc coordinating cysteine positions. The FYVE finger is structurally related to the

>KOG4345 consensus NF-kappa B regulator AP20/Cezanne [Signal transduction mechanisms]

Probab=91.06  E-value=0.1  Score=51.23  Aligned_cols=30  Identities=40%  Similarity=0.943  Sum_probs=26.7

Q ss_pred             ccc-ccCCCCCCCcCCCcchhhhhHHHHhhh
Q 030772           22 IYC-ANNCGFFGSANTNNLCSKCYKDYLLKQ   51 (171)
Q Consensus        22 ~lC-~ngCGFfGs~at~nlCSkCyr~~~~~~   51 (171)
                      .+| .-+|.|||++.|+++||-|||+.+..-
T Consensus       736 ~rck~~nc~~Yg~~~~~~~c~~c~r~el~~~  766 (774)
T KOG4345|consen  736 MRCKWPNCDHYGRAETNGYCSECYREELRRG  766 (774)
T ss_pred             hHhhcccchhhccccccccchhhhhHHHhcc
Confidence            478 679999999999999999999998654

>KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=89.70  E-value=0.14  Score=49.83  Aligned_cols=45  Identities=31%  Similarity=0.628  Sum_probs=35.5

Q ss_pred             CCCCccccccccccccc--ceee-cCccccCCcC-----------CCCCCCCCccchHh
Q 030772          107 RPANRCSFCRKRIGLTG--FKCR-CEQTFCSLHR-----------YSDKHNCVFDYKSA  151 (171)
Q Consensus       107 ~~~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~HR-----------y~e~H~C~fDyk~~  151 (171)
                      .....|..|+.+.|+++  ..|| ||.+||+.|=           |-+.--|.-||...
T Consensus       163 ~D~~~C~rCr~~F~~~~rkHHCr~CG~vFC~qcss~s~~lP~~Gi~~~VRVCd~C~E~l  221 (634)
T KOG1818|consen  163 IDSEECLRCRVKFGLTNRKHHCRNCGQVFCGQCSSKSLTLPKLGIEKPVRVCDSCYELL  221 (634)
T ss_pred             ccccccceeeeeeeeccccccccccchhhccCccccccCcccccccccceehhhhHHHh
Confidence            34689999999999985  8999 9999999874           34556677776543

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=87.60  E-value=0.29  Score=28.62  Aligned_cols=23  Identities=22%  Similarity=0.577  Sum_probs=20.6

Q ss_pred             Ccccccccccccccceee-cCccc
Q 030772          110 NRCSFCRKRIGLTGFKCR-CEQTF  132 (171)
Q Consensus       110 ~rC~~C~kkvgl~gf~Cr-Cg~~F  132 (171)
                      .+|-.|++.|.+..-.|- ||+.|
T Consensus         1 K~CP~C~~~V~~~~~~Cp~CG~~F   24 (26)
T PF10571_consen    1 KTCPECGAEVPESAKFCPHCGYDF   24 (26)
T ss_pred             CcCCCCcCCchhhcCcCCCCCCCC
Confidence            368999999999999999 99887

Several members are annotated as putative helicases.

>PF15135 UPF0515: Uncharacterised protein UPF0515

Probab=81.38  E-value=0.79  Score=40.40  Aligned_cols=31  Identities=39%  Similarity=1.074  Sum_probs=24.5

Q ss_pred             CCCCCCCcccccccc---------ccccccee-ecCccccC
Q 030772          104 PEKRPANRCSFCRKR---------IGLTGFKC-RCEQTFCS  134 (171)
Q Consensus       104 ~~~~~~~rC~~C~kk---------vgl~gf~C-rCg~~FC~  134 (171)
                      +..+..+||..|+||         .||.-|.| .|+++|=+
T Consensus       127 p~rKeVSRCr~C~~rYDPVP~dkmwG~aef~C~~C~h~F~G  167 (278)
T PF15135_consen  127 PQRKEVSRCRKCRKRYDPVPCDKMWGIAEFHCPKCRHNFRG  167 (278)
T ss_pred             CcccccccccccccccCCCccccccceeeeecccccccchh
Confidence            334567999999988         67778999 59999854

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=80.99  E-value=0.84  Score=29.38  Aligned_cols=24  Identities=33%  Similarity=0.892  Sum_probs=18.5

Q ss_pred             CCCccccccccc---ccccceee-cCcc
Q 030772          108 PANRCSFCRKRI---GLTGFKCR-CEQT  131 (171)
Q Consensus       108 ~~~rC~~C~kkv---gl~gf~Cr-Cg~~  131 (171)
                      .+..|..|++.|   ++.|++|+ |+.+
T Consensus        10 ~~~~C~~C~~~i~g~~~~g~~C~~C~~~   37 (53)
T PF00130_consen   10 KPTYCDVCGKFIWGLGKQGYRCSWCGLV   37 (53)
T ss_dssp             STEB-TTSSSBECSSSSCEEEETTTT-E
T ss_pred             CCCCCcccCcccCCCCCCeEEECCCCCh
Confidence            468999999999   56799999 7654

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	171
1wfl_A	74	Solution Structure Of The Zf-An1 Domain From Mouse		3e-13
1wfh_A	64	Solution Structrue Of The Zf-An1 Domain From Arabid		5e-13
1wfp_A	74	Solution Structure Of The Zf-an1 Domain From Arabio		2e-11
1wg2_A	64	Solution Structure Of Zf-An1 Domain From Arabidopsi		6e-11
1wff_A	85	Solution Structure Of The Zf-An1 Domain From Mouse		2e-10
2kzy_A	62	Solution Nmr Structure Of The Znf216 A20 Zinc Finge		2e-05

>pdb|1WFL|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Zinc Finger Protein 216 Length = 74

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 33/41 (80%)
Query: 110 NRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKS 150
           NRC  CRK++GLTGF CRC   FC LHRYSDKHNC +DYK+
Sbjct: 26  NRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKA 66

>pdb|1WFH|A Chain A, Solution Structrue Of The Zf-An1 Domain From Arabidopsis Thaliana At2g36320 Protein Length = 64

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 107 RPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQD 154
           RP NRC+ CRKR+GLTGF CRC  TFC  HRY + H C FD+KSAG  
Sbjct: 14  RP-NRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSG 60

>pdb|1WFP|A Chain A, Solution Structure Of The Zf-an1 Domain From Arabiopsis Thaliana F5o11.17 Protein Length = 74

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 34/51 (66%)
Query: 99  ASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYK 149
           A+  +P K  A RC  C K++G+TGFKCRC  TFC  HRY + H C FD+K
Sbjct: 15  AAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFK 65

>pdb|1WG2|A Chain A, Solution Structure Of Zf-An1 Domain From Arabidopsis Thaliana Length = 64

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 107 RPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQ 153
           RP NRC  C K++G+ GFKC+C  TFC  HRY +KH C FD+K  G 
Sbjct: 13  RPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGS 59

>pdb|1WFF|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Riken Cdna 2810002d23 Protein Length = 85

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 105 EKRPANRCSFCRKRIGL-TGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPV 162
           +K+    C  C K+ GL T F+CRC   FC+ HRY++ H C +DYKSAG+  + +ANPV
Sbjct: 21  KKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPV 79

>pdb|2KZY|A Chain A, Solution Nmr Structure Of The Znf216 A20 Zinc Finger Length = 62

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 14 SHETQNTP--IYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPI 60
          + ET  TP  + C+  CGF+G+  TN +CS CYK++L +Q  +   SP+
Sbjct: 4  AQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPM 52

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	171
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	9e-29
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	3e-27
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	1e-26
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	1e-26
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	5e-24
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	9e-22
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	8e-12
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	2e-10
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	1e-04

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 85

 Score =  100 bits (251), Expect = 9e-29
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 88  PAAQVVVVDEGASSENPEKRPANRCSFCRKRIGL-TGFKCRCEQTFCSLHRYSDKHNCVF 146
            ++ +  +    +    +K+    C  C K+ GL T F+CRC   FC+ HRY++ H C +
Sbjct: 4   GSSGIHHLPPVKAPLQTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNY 63

Query: 147 DYKSAGQDAIAKANPVVKA 165
           DYKSAG+  + +ANPV   
Sbjct: 64  DYKSAGRRYLEEANPVSGP 82

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 74

 Score = 96.5 bits (240), Expect = 3e-27
 Identities = 28/70 (40%), Positives = 38/70 (54%)

Query: 88  PAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFD 147
            ++     D  A+  +P K  A RC  C K++G+TGFKCRC  TFC  HRY + H C FD
Sbjct: 4   GSSGTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFD 63

Query: 148 YKSAGQDAIA 157
           +K       +
Sbjct: 64  FKGVASGPSS 73

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 94.9 bits (236), Expect = 1e-26
 Identities = 31/61 (50%), Positives = 39/61 (63%)

Query: 97  EGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAI 156
            G+S +    +  NRC+ CRKR+GLTGF CRC  TFC  HRY + H C FD+KSAG    
Sbjct: 3   SGSSGQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPS 62

Query: 157 A 157
           +
Sbjct: 63  S 63

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 94.9 bits (236), Expect = 1e-26
 Identities = 28/61 (45%), Positives = 37/61 (60%)

Query: 97  EGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAI 156
            G+S  +   RP NRC  C K++G+ GFKC+C  TFC  HRY +KH C FD+K  G    
Sbjct: 3   SGSSGPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS 62

Query: 157 A 157
           +
Sbjct: 63  S 63

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 74

 Score = 88.5 bits (219), Expect = 5e-24
 Identities = 30/70 (42%), Positives = 38/70 (54%)

Query: 88  PAAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFD 147
            ++          +    K   NRC  CRK++GLTGF CRC   FC LHRYSDKHNC +D
Sbjct: 4   GSSGPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYD 63

Query: 148 YKSAGQDAIA 157
           YK+      +
Sbjct: 64  YKAEASGPSS 73

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 67

 Score = 82.4 bits (203), Expect = 9e-22
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 96  DEGASSENPEKRPANRCSFCRKRIGLTGFK---CRCEQTFCSLHRYSDKHNCVFDYKSAG 152
             G+S    +++   RC  C+ ++ L   +   CRC   FC LHR  ++H+C FD+   G
Sbjct: 2   SSGSSGSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRG 61

Query: 153 QDAIA 157
               +
Sbjct: 62  SGPSS 66

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A Length = 62

 Score = 56.6 bits (136), Expect = 8e-12
 Identities = 18/56 (32%), Positives = 28/56 (50%)

Query: 12 ETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIEEEKNKN 67
                   P+ C+  CGF+G+  TN +CS CYK++L +Q  +   SP+      N
Sbjct: 4  AQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSN 59

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B Length = 74

 Score = 53.7 bits (128), Expect = 2e-10
 Identities = 12/63 (19%), Positives = 23/63 (36%)

Query: 11 EETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIEEEKNKNKTN 70
          E        + + C   CG++G+      CSKC+++   K  +       E  +   +  
Sbjct: 6  ERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREE 65

Query: 71 IEQ 73
           E 
Sbjct: 66 EEA 68

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 63

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 98  GASSENPEKRPANRCSFCR-KRIGLTGFKCR-CEQTFCSLHRYSDKHNC 144
           G+S  +  K   N+C     ++  +    C  C + FC  HR+   H+C
Sbjct: 1   GSSGSSGRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDC 49

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	171
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	99.96
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.93
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	99.92
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	99.91
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.91
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	99.91
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	99.74
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	99.71
3oj3_I	49	Tumor necrosis factor alpha-induced protein 3; ubi	99.56
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.34
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	99.32
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.24
2eqe_A	48	Tumor necrosis factor, alpha-induced protein 3; ZF	97.81
1vfy_A	73	Phosphatidylinositol-3-phosphate binding FYVE doma	94.33
1wfk_A	88	Zinc finger, FYVE domain containing 19; riken stru	93.98
2yw8_A	82	RUN and FYVE domain-containing protein 1; structur	93.7
1x4u_A	84	Zinc finger, FYVE domain containing 27 isoform B;	93.31
1z2q_A	84	LM5-1; membrane protein, FYVE domain, zinc-finger;	93.15
1joc_A	125	EEA1, early endosomal autoantigen 1; FYVE domain,	93.13
3zyq_A	226	Hepatocyte growth factor-regulated tyrosine kinas	92.31
1dvp_A	220	HRS, hepatocyte growth factor-regulated tyrosine k	92.19
3t7l_A	90	Zinc finger FYVE domain-containing protein 16; str	91.31
1y02_A	120	CARP2, FYVE-ring finger protein sakura; zinc-bindi	90.23
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	81.91
3mpx_A	434	FYVE, rhogef and PH domain-containing protein 5; s	81.11
2eqf_A	46	Tumor necrosis factor, alpha-induced protein 3; ZF	80.41

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.96  E-value=1.8e-30  Score=189.65  Aligned_cols=62  Identities=44%  Similarity=0.997  Sum_probs=59.1

Q ss_pred             CCCCCCcccccccccccc-cceeecCccccCCcCCCCCCCCCccchHhhHHHHHHhCCccccc
Q 030772          105 EKRPANRCSFCRKRIGLT-GFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKAD  166 (171)
Q Consensus       105 ~~~~~~rC~~C~kkvgl~-gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~NP~v~~~  166 (171)
                      +++.++||+.|+|||||+ +|.||||++||+.|||||+|+|+||||++||++|+|+||+|+++
T Consensus        21 ~k~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~   83 (85)
T 1wff_A           21 KKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             CcccCccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence            456789999999999996 99999999999999999999999999999999999999999986

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.93  E-value=1.5e-27  Score=166.01  Aligned_cols=55  Identities=53%  Similarity=1.141  Sum_probs=51.2

Q ss_pred             CCCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhHHHHH
Q 030772          103 NPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIA  157 (171)
Q Consensus       103 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~  157 (171)
                      .+++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus         9 ~~~k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~   63 (64)
T 1wfh_A            9 PSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS   63 (64)
T ss_dssp             CCCCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred             CCCCCcCCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence            3456778999999999999999999999999999999999999999999999875

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.92  E-value=5.3e-27  Score=163.32  Aligned_cols=54  Identities=48%  Similarity=1.122  Sum_probs=50.1

Q ss_pred             CCCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhHHHH
Q 030772          103 NPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAI  156 (171)
Q Consensus       103 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l  156 (171)
                      .+++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus         9 ~~~~~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~   62 (64)
T 1wg2_A            9 SRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS   62 (64)
T ss_dssp             SCCSCCSCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred             CCCCCcCCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence            345567899999999999999999999999999999999999999999999876

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.91  E-value=1.7e-25  Score=159.59  Aligned_cols=52  Identities=58%  Similarity=1.216  Sum_probs=48.2

Q ss_pred             CCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhHHH
Q 030772          104 PEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDA  155 (171)
Q Consensus       104 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~  155 (171)
                      +.+..++||+.|+|||||++|.||||++||+.|||+|+|+|+||||++||++
T Consensus        20 ~~k~~~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~   71 (74)
T 1wfl_A           20 LPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP   71 (74)
T ss_dssp             CCCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred             cCCCcCCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence            3455689999999999999999999999999999999999999999999864

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.91  E-value=6.7e-26  Score=161.63  Aligned_cols=54  Identities=48%  Similarity=1.114  Sum_probs=50.2

Q ss_pred             CCCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhHHHH
Q 030772          103 NPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAI  156 (171)
Q Consensus       103 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l  156 (171)
                      .++++.++||+.|+|||||++|.||||++||+.|||||+|+|+||||++||++|
T Consensus        19 ~~~k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~   72 (74)
T 1wfp_A           19 DPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS   72 (74)
T ss_dssp             CCTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred             ccCcccCccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence            345667899999999999999999999999999999999999999999999876

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.91  E-value=6.7e-26  Score=159.02  Aligned_cols=54  Identities=31%  Similarity=0.786  Sum_probs=49.4

Q ss_pred             CCCCCCCCccccccccccccc---ceeecCccccCCcCCCCCCCCCccchHhhHHHH
Q 030772          103 NPEKRPANRCSFCRKRIGLTG---FKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAI  156 (171)
Q Consensus       103 ~~~~~~~~rC~~C~kkvgl~g---f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l  156 (171)
                      .++++.++||+.|+|||||++   |+||||++||+.|||||+|+|+||||++||+.|
T Consensus         9 ~~~~~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~   65 (67)
T 1x4w_A            9 RSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS   65 (67)
T ss_dssp             CCSCSCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred             ccCCccCCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence            345667899999999999995   999999999999999999999999999999764

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A

Probab=99.74  E-value=3.6e-19  Score=123.06  Aligned_cols=39  Identities=38%  Similarity=0.961  Sum_probs=34.4

Q ss_pred             CCCCccccccCCCCCCCcCCCcchhhhhHHHHhhhcCCC
Q 030772           17 TQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNP   55 (171)
Q Consensus        17 ~p~~p~lC~ngCGFfGs~at~nlCSkCyr~~~~~~~~~~   55 (171)
                      +|++|+||+|||||||||+|+||||||||+++++++++.
T Consensus         9 ~~~~~~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~~   47 (62)
T 2kzy_A            9 QTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSG   47 (62)
T ss_dssp             CCSCCCBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHHC
T ss_pred             CCCcccchhhCCCCcCChhhcCcCHHHHHHHHHhhhccc
Confidence            477899999999999999999999999999987665543

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B

Probab=99.71  E-value=1.9e-18  Score=122.87  Aligned_cols=41  Identities=24%  Similarity=0.729  Sum_probs=26.5

Q ss_pred             hhhhcCCCCCCccccccCCCCCCCcCCCcchhhhhHHHHhh
Q 030772           10 LEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLK   50 (171)
Q Consensus        10 ~~~~~~q~p~~p~lC~ngCGFfGs~at~nlCSkCyr~~~~~   50 (171)
                      .+.++++.|++|+||+|||||||||+|+||||||||+.+.+
T Consensus         5 ~~~~~~q~pe~~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k   45 (74)
T 2c7n_A            5 SERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHK   45 (74)
T ss_dssp             -------------CCTTCSSSCCCGGGTTCCHHHHHHHHHH
T ss_pred             hhhccCCCCCcchhHHhCCCCCCChhhcCccHHHHHHHHHH
Confidence            34566888999999999999999999999999999998644

>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C

Probab=99.56  E-value=1e-15  Score=100.96  Aligned_cols=28  Identities=25%  Similarity=0.848  Sum_probs=26.5

Q ss_pred             cccc-cCCCCCCCcCCCcchhhhhHHHHh
Q 030772           22 IYCA-NNCGFFGSANTNNLCSKCYKDYLL   49 (171)
Q Consensus        22 ~lC~-ngCGFfGs~at~nlCSkCyr~~~~   49 (171)
                      +||+ |||||||||+|+|||||||||++.
T Consensus        19 ~lC~~ngCGFfG~p~t~n~CSkCyre~~e   47 (49)
T 3oj3_I           19 SKCRKAGCVYFGTPENKGFCTLCFIEYRE   47 (49)
T ss_dssp             CBCSSTTCSSBCBGGGTTBCHHHHHHHHH
T ss_pred             cccccCCCCCccCcccCCcchHHHHHHHH
Confidence            6999 999999999999999999999864

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.34  E-value=1.3e-13  Score=100.50  Aligned_cols=59  Identities=27%  Similarity=0.578  Sum_probs=49.5

Q ss_pred             CCCCCCcccc--cccccccccceee-cCccccCCcCCCCCCCCCccchHhhHHHHHHhCCcccccccccC
Q 030772          105 EKRPANRCSF--CRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI  171 (171)
Q Consensus       105 ~~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~NP~v~~~Kl~kI  171 (171)
                      .+..++||..  |+++ +|++|.|+ |+.+||..|||++.|+|+..       .+.+.++...+.++.+|
T Consensus        21 ~~~~~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~~~   82 (86)
T 1wfe_A           21 DEHKSYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVRSG   82 (86)
T ss_dssp             SCSCCEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSSCS
T ss_pred             cCCCCCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHHHH
Confidence            3456799999  9998 88999999 99999999999999999975       34567777777777665

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.32  E-value=4.5e-13  Score=92.73  Aligned_cols=42  Identities=33%  Similarity=0.756  Sum_probs=38.0

Q ss_pred             CCCCCCCcccc--cccccccccceee-cCccccCCcCCCCCCCCCc
Q 030772          104 PEKRPANRCSF--CRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVF  146 (171)
Q Consensus       104 ~~~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f  146 (171)
                      ..+...+||..  |+++ +|++|.|+ |+.+||..|||+|+|+|+-
T Consensus         7 k~k~~~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~~   51 (63)
T 1x4v_A            7 GRKIFTNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCSG   51 (63)
T ss_dssp             CCCTTCCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred             CCcccCCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCCC
Confidence            34556899999  9998 99999999 9999999999999999973

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.24  E-value=2e-12  Score=92.23  Aligned_cols=42  Identities=33%  Similarity=0.734  Sum_probs=39.0

Q ss_pred             CCCcccc--cccccccccceee-cCccccCCcCCCCCCCCCccchH
Q 030772          108 PANRCSF--CRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVFDYKS  150 (171)
Q Consensus       108 ~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  150 (171)
                      ..+||..  |+++ ++++|+|+ |+.+||..|||++.|+|+++++.
T Consensus        13 ~g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~~   57 (75)
T 1wys_A           13 IGQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNVV   57 (75)
T ss_dssp             CCCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSSC
T ss_pred             cCCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCccc
Confidence            3689998  9997 89999999 99999999999999999999863

>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=97.81  E-value=1.1e-05  Score=52.71  Aligned_cols=29  Identities=24%  Similarity=0.841  Sum_probs=26.3

Q ss_pred             Cccccc-cCCCCCCCcCCCcchhhhhHHHH
Q 030772           20 TPIYCA-NNCGFFGSANTNNLCSKCYKDYL   48 (171)
Q Consensus        20 ~p~lC~-ngCGFfGs~at~nlCSkCyr~~~   48 (171)
                      +...|. .||-|||+|.+.++|+.||-++.
T Consensus        14 gt~kCRk~GC~fFGTpen~GFCTlCf~eyr   43 (48)
T 2eqe_A           14 GTSKCRKAGCVYFGTPENKGFCTLCFIEYS   43 (48)
T ss_dssp             CSSBCSSTTCCSBCCTTTTTCCHHHHHHHH
T ss_pred             ccchhhhcCCCcccCcccCceeeeehhhhh
Confidence            446896 89999999999999999999995

>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1

Probab=94.33  E-value=0.019  Score=39.33  Aligned_cols=27  Identities=37%  Similarity=1.001  Sum_probs=24.1

Q ss_pred             Ccccccccccccc--cceee-cCccccCCc
Q 030772          110 NRCSFCRKRIGLT--GFKCR-CEQTFCSLH  136 (171)
Q Consensus       110 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ..|..|+++.+++  -..|| ||.+||+.+
T Consensus        12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~C   41 (73)
T 1vfy_A           12 DACMICSKKFSLLNRKHHCRSCGGVFCQEH   41 (73)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred             CcccCCCCccCCccccccCCCCCEEEcccc
Confidence            5899999999997  49999 999999875

>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1

Probab=93.98  E-value=0.035  Score=39.55  Aligned_cols=29  Identities=28%  Similarity=0.745  Sum_probs=25.2

Q ss_pred             CCCccccccccccccc--ceee-cCccccCCc
Q 030772          108 PANRCSFCRKRIGLTG--FKCR-CEQTFCSLH  136 (171)
Q Consensus       108 ~~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  136 (171)
                      ....|..|.++.+++.  ..|| ||.+||+.+
T Consensus         8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   39 (88)
T 1wfk_A            8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC   39 (88)
T ss_dssp             CCSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred             cCCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence            3578999999999974  8999 999999874

>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A

Probab=93.70  E-value=0.032  Score=39.01  Aligned_cols=28  Identities=32%  Similarity=0.918  Sum_probs=24.4

Q ss_pred             CCccccccccccccc--ceee-cCccccCCc
Q 030772          109 ANRCSFCRKRIGLTG--FKCR-CEQTFCSLH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++.+++.  ..|| ||.+||+.+
T Consensus        19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   49 (82)
T 2yw8_A           19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC   49 (82)
T ss_dssp             CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred             CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence            468999999999874  8999 999999864

>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.31  E-value=0.047  Score=38.24  Aligned_cols=28  Identities=25%  Similarity=0.667  Sum_probs=24.6

Q ss_pred             CCccccccccccccc--ceee-cCccccCCc
Q 030772          109 ANRCSFCRKRIGLTG--FKCR-CEQTFCSLH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  136 (171)
                      ...|..|.++.+|+.  ..|| ||.+||+..
T Consensus        14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   44 (84)
T 1x4u_A           14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC   44 (84)
T ss_dssp             CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred             CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence            478999999999974  8999 999999864

>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}

Probab=93.15  E-value=0.046  Score=38.35  Aligned_cols=28  Identities=29%  Similarity=0.547  Sum_probs=24.6

Q ss_pred             CCccccccccccccc--ceee-cCccccCCc
Q 030772          109 ANRCSFCRKRIGLTG--FKCR-CEQTFCSLH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++.+++.  ..|| ||.+||+.+
T Consensus        21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   51 (84)
T 1z2q_A           21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDC   51 (84)
T ss_dssp             CCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred             CCCCcCcCCccccchhcccccCCCcEEChHH
Confidence            578999999999974  8999 999999864

>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A

Probab=93.13  E-value=0.029  Score=42.29  Aligned_cols=28  Identities=32%  Similarity=0.797  Sum_probs=24.3

Q ss_pred             CCccccccccccccc--ceee-cCccccCCc
Q 030772          109 ANRCSFCRKRIGLTG--FKCR-CEQTFCSLH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++.+++.  ..|| ||.+||+.+
T Consensus        69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C   99 (125)
T 1joc_A           69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC   99 (125)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence            468999999999874  8999 999999864

>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*

Probab=92.31  E-value=0.086  Score=43.01  Aligned_cols=29  Identities=38%  Similarity=0.917  Sum_probs=25.0

Q ss_pred             CCCcccccccccccc--cceee-cCccccCCc
Q 030772          108 PANRCSFCRKRIGLT--GFKCR-CEQTFCSLH  136 (171)
Q Consensus       108 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ....|..|+++.+++  -..|| ||.+||+.+
T Consensus       163 ~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C  194 (226)
T 3zyq_A          163 DAEECHRCRVQFGVMTRKHHCRACGQIFCGKC  194 (226)
T ss_dssp             CCSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred             cCCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence            346899999999987  49999 999999864

>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1

Probab=92.19  E-value=0.083  Score=42.58  Aligned_cols=28  Identities=36%  Similarity=0.865  Sum_probs=24.6

Q ss_pred             CCccccccccccccc--ceee-cCccccCCc
Q 030772          109 ANRCSFCRKRIGLTG--FKCR-CEQTFCSLH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++.+++.  ..|| ||.+||+.+
T Consensus       161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C  191 (220)
T 1dvp_A          161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC  191 (220)
T ss_dssp             CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred             CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence            479999999999874  9999 999999864

>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}

Probab=91.31  E-value=0.072  Score=37.90  Aligned_cols=28  Identities=32%  Similarity=0.886  Sum_probs=24.2

Q ss_pred             CCcccccccccccc--cceee-cCccccCCc
Q 030772          109 ANRCSFCRKRIGLT--GFKCR-CEQTFCSLH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|.++.+++  -..|| ||.+||+..
T Consensus        20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~C   50 (90)
T 3t7l_A           20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVC   50 (90)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCcCcCCCCcccchhhCccccCCCCEECCcc
Confidence            46899999999997  49999 999998753

>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1

Probab=90.23  E-value=0.096  Score=39.63  Aligned_cols=41  Identities=20%  Similarity=0.504  Sum_probs=28.4

Q ss_pred             CCcccccccccccc--cceee-cCccccCC---cCCCCCCCCCccch
Q 030772          109 ANRCSFCRKRIGLT--GFKCR-CEQTFCSL---HRYSDKHNCVFDYK  149 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~---HRy~e~H~C~fDyk  149 (171)
                      ...|..|+++.+++  -..|| ||.+||+.   |+.+..--|..=|.
T Consensus        19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~   65 (120)
T 1y02_A           19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR   65 (120)
T ss_dssp             -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred             cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence            47899999999986  48999 99999875   46555555664444

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=81.91  E-value=0.53  Score=40.32  Aligned_cols=42  Identities=17%  Similarity=0.365  Sum_probs=27.9

Q ss_pred             CCCCccccccccc-ccc--cceee-cCccccCCcCCCCCCCCCccch
Q 030772          107 RPANRCSFCRKRI-GLT--GFKCR-CEQTFCSLHRYSDKHNCVFDYK  149 (171)
Q Consensus       107 ~~~~rC~~C~kkv-gl~--gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  149 (171)
                      ..+..|..|++.+ |+.  |++|| ||.++|..-.-.=. .|.-+.-
T Consensus       355 ~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~C~~~~~  400 (406)
T 2vrw_B          355 EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-PCGRHGQ  400 (406)
T ss_dssp             SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-CC-----
T ss_pred             CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-CCCCCch
Confidence            3578999999988 674  89999 99999976432112 3876644

>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}

Probab=81.11  E-value=0.31  Score=41.91  Aligned_cols=27  Identities=26%  Similarity=0.619  Sum_probs=0.0

Q ss_pred             CCcccccccccccc--cceee-cCccccCC
Q 030772          109 ANRCSFCRKRIGLT--GFKCR-CEQTFCSL  135 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~  135 (171)
                      ...|..|+++.+++  ...|| ||.+||+.
T Consensus       375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~  404 (434)
T 3mpx_A          375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRN  404 (434)
T ss_dssp             ------------------------------
T ss_pred             CCcCCCcCCCCCCcchhhhcccCcCEeehh
Confidence            57899999999986  59999 99999865

>2eqf_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=80.41  E-value=0.72  Score=29.48  Aligned_cols=24  Identities=33%  Similarity=0.791  Sum_probs=21.6

Q ss_pred             cccCCCCCCCcCCCcchhhhhHHH
Q 030772           24 CANNCGFFGSANTNNLCSKCYKDY   47 (171)
Q Consensus        24 C~ngCGFfGs~at~nlCSkCyr~~   47 (171)
                      ++-+|..|||.-.+++|..||.-.
T Consensus        13 ~apgCdhygN~kc~GyCNeC~~fK   36 (46)
T 2eqf_A           13 RAPACDHFGNAKCNGYCNECFQFK   36 (46)
T ss_dssp             SSTTCCSCCBGGGTBSCHHHHHHH
T ss_pred             cCcccccccchhhhhhhHHHHhhH
Confidence            477999999999999999999754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	171
d1wffa_	85	g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog	2e-27
d1wfha_	64	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	2e-24
d1wfpa_	74	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	5e-23
d1wfla_	74	g.80.1.1 (A:) Zinc finger A20 domain containing pr	3e-22
d2c7na1	56	g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-b	5e-10
d1wfea_	86	g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mous	0.002

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]} Length = 85

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 96.1 bits (239), Expect = 2e-27
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)

Query: 99  ASSENPEKRPANRCSFCRKRIGL-TGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIA 157
            +    +K+    C  C K+ GL T F+CRC   FC+ HRY++ H C +DYKSAG+  + 
Sbjct: 15  KAPLQTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLE 74

Query: 158 KANPVVKA 165
           +ANPV   
Sbjct: 75  EANPVSGP 82

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 87.9 bits (218), Expect = 2e-24
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 98  GASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIA 157
           G+S +    +  NRC+ CRKR+GLTGF CRC  TFC  HRY + H C FD+KSAG    +
Sbjct: 4   GSSGQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS 63

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 85.0 bits (210), Expect = 5e-23
 Identities = 28/57 (49%), Positives = 35/57 (61%)

Query: 96  DEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAG 152
           D  A+  +P K  A RC  C K++G+TGFKCRC  TFC  HRY + H C FD+K   
Sbjct: 12  DSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVA 68

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.7 bits (204), Expect = 3e-22
 Identities = 30/64 (46%), Positives = 37/64 (57%)

Query: 89  AAQVVVVDEGASSENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDY 148
           ++          +    K   NRC  CRK++GLTGF CRC   FC LHRYSDKHNC +DY
Sbjct: 5   SSGPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDY 64

Query: 149 KSAG 152
           K+  
Sbjct: 65  KAEA 68

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (121), Expect = 5e-10
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 24 CANNCGFFGSANTNNLCSKCYKDYLLKQSKNPNPSPIEEEKNKNKTNIEQNEA 76
          C   CG++G+      CSKC+++   K  +      I+E+    +    + E 
Sbjct: 2  CKKGCGYYGNPAWQGFCSKCWREEYHKARQ----KQIQEDWELAERLQREEEE 50

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 86

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.8 bits (77), Expect = 0.002
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 95  VDEGASSENPEKRPANRCSFCR-KRIGLTGFKC-RCEQTFCSLHRYSDKHNC 144
           V+        ++  +  CSF     + L    C  CE+ FC  HR+   H+C
Sbjct: 11  VNVVKERPKTDEHKSYSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDC 62

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	171
d1wffa_	85	ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus	99.94
d1wfha_	64	Zinc finger A20 and AN1 domains containing protein	99.92
d1wfla_	74	Zinc finger A20 domain containing protein 2 {Mouse	99.91
d1wfpa_	74	Zinc finger A20 and AN1 domains containing protein	99.9
d2c7na1	56	RabGEF1 (Rabex-5), ubiquitin-binding domain {Human	99.64
d1wfea_	86	AN1-type zinc finger protein 1 {Mouse (Mus musculu	98.24
d1wfka_	88	Zinc finger FYVE domain containing protein 19 {Mou	95.51
d1dvpa2	72	Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7	94.53
d1vfya_	67	vps27p protein {Baker's yeast (Saccharomyces cerev	94.21
d1joca1	64	Eea1 {Human (Homo sapiens) [TaxId: 9606]}	93.19
d1zbdb_	124	Effector domain of rabphilin-3a {Rat (Rattus norve	91.98
d1y02a2	51	Rififylin (FYVE-RING finger protein Sakura) {Human	90.88
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	80.75

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=6.3e-29  Score=179.71  Aligned_cols=63  Identities=44%  Similarity=0.992  Sum_probs=58.4

Q ss_pred             CCCCCCCccccccccccc-ccceeecCccccCCcCCCCCCCCCccchHhhHHHHHHhCCccccc
Q 030772          104 PEKRPANRCSFCRKRIGL-TGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKAD  166 (171)
Q Consensus       104 ~~~~~~~rC~~C~kkvgl-~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~NP~v~~~  166 (171)
                      ..+..++||+.|+|||+| ++|+||||++||+.|||||.|+|+||||+.||++|+++||+|.+.
T Consensus        20 ~kk~~~~RC~~C~KKl~l~~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~~k~~L~k~NP~i~p~   83 (85)
T d1wffa_          20 TKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             cccccCCcChhcCCeecCCcCeecCCCCEehhhcCCCcCcCCCcchHHHHHHHHHHHCCccCCC
Confidence            345567899999999999 489999999999999999999999999999999999999999874

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=1.2e-26  Score=159.72  Aligned_cols=53  Identities=55%  Similarity=1.188  Sum_probs=49.1

Q ss_pred             CCCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhHHH
Q 030772          103 NPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDA  155 (171)
Q Consensus       103 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~  155 (171)
                      .+++++++||..|+|||+|++|+||||++||+.|||||.|+|+||||++||..
T Consensus         9 ~~~~~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~Gr~~   61 (64)
T d1wfha_           9 PSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGP   61 (64)
T ss_dssp             CCCCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSC
T ss_pred             CCCCCCCCcChhhCCCccceeeeccCCCEehhhcCCCcCcCCCCcchhccCCC
Confidence            34567889999999999999999999999999999999999999999999854

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1.2e-25  Score=158.69  Aligned_cols=50  Identities=60%  Similarity=1.262  Sum_probs=46.1

Q ss_pred             CCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhH
Q 030772          104 PEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQ  153 (171)
Q Consensus       104 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr  153 (171)
                      +++.+++||..|+|||+|++|.||||++||+.|||||.|+|+||||+.|.
T Consensus        20 ~~k~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~g~   69 (74)
T d1wfla_          20 LPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS   69 (74)
T ss_dssp             CCCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSS
T ss_pred             CCCCCCCcChhhCCcccceeeEccCCCEehhhcCCCcCcCCCCccccccc
Confidence            34567899999999999999999999999999999999999999998763

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=3.1e-25  Score=156.59  Aligned_cols=52  Identities=50%  Similarity=1.148  Sum_probs=48.6

Q ss_pred             CCCCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhH
Q 030772          102 ENPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQ  153 (171)
Q Consensus       102 ~~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr  153 (171)
                      ..+++.+++||+.|+|||+|++|.||||++||+.|||||.|+|+||||+.||
T Consensus        18 ~~~~k~kk~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~C~fDyK~~gr   69 (74)
T d1wfpa_          18 LDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAS   69 (74)
T ss_dssp             SCCTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCC
T ss_pred             CCCCCCCCCcChhcCCccCCCceecCCCChhhhccCCccCcCCCCcchhccc
Confidence            3456677999999999999999999999999999999999999999999987

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.4e-17  Score=111.20  Aligned_cols=32  Identities=28%  Similarity=0.896  Sum_probs=29.3

Q ss_pred             ccccCCCCCCCcCCCcchhhhhHHHHhhhcCC
Q 030772           23 YCANNCGFFGSANTNNLCSKCYKDYLLKQSKN   54 (171)
Q Consensus        23 lC~ngCGFfGs~at~nlCSkCyr~~~~~~~~~   54 (171)
                      ||+|||||||||+|+|||||||||++.++++.
T Consensus         1 lC~~gCGFyG~~~~~g~CSkCyr~~~~k~~q~   32 (56)
T d2c7na1           1 LCKKGCGYYGNPAWQGFCSKCWREEYHKARQK   32 (56)
T ss_dssp             CCTTCSSSCCCGGGTTCCHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCcccCCcchHHHHHHHHHHHHH
Confidence            79999999999999999999999998776653

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.24  E-value=2.3e-07  Score=65.74  Aligned_cols=40  Identities=35%  Similarity=0.867  Sum_probs=34.8

Q ss_pred             CCCCCcccc--cccccccccceee-cCccccCCcCCCCCCCCCc
Q 030772          106 KRPANRCSF--CRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVF  146 (171)
Q Consensus       106 ~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f  146 (171)
                      ..+..+|..  |++ +.++.|.|. |+..||..||+++.|.|.-
T Consensus        22 ~~~~~~Cs~~~C~~-~~~lp~~C~~C~~~FC~~Hr~~e~H~C~~   64 (86)
T d1wfea_          22 EHKSYSCSFKGCTD-VELVAVICPYCEKNFCLRHRHQSDHDCEK   64 (86)
T ss_dssp             CSCCEECCSTTCCC-EESSCEECTTTCCEECGGGCSTGGGTCSS
T ss_pred             CCccCcCCCCCCCC-cccCcccchhhCcchhhccCCccCCCCCC
Confidence            345678997  985 689999997 9999999999999999973

>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Zinc finger FYVE domain containing protein 19
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.51  E-value=0.0039  Score=43.04  Aligned_cols=29  Identities=28%  Similarity=0.748  Sum_probs=25.8

Q ss_pred             CCCcccccccccccc--cceee-cCccccCCc
Q 030772          108 PANRCSFCRKRIGLT--GFKCR-CEQTFCSLH  136 (171)
Q Consensus       108 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ..++|..|+++.+++  -..|| ||.+||..+
T Consensus         8 ~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~C   39 (88)
T d1wfka_           8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC   39 (88)
T ss_dssp             CCSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred             ccCcCcccCchhccccccccccccChhhChHH
Confidence            468999999999986  48999 999999866

>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Hrs
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.53  E-value=0.013  Score=38.76  Aligned_cols=28  Identities=36%  Similarity=0.839  Sum_probs=24.9

Q ss_pred             Ccccccccccccc--cceee-cCccccCCcC
Q 030772          110 NRCSFCRKRIGLT--GFKCR-CEQTFCSLHR  137 (171)
Q Consensus       110 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  137 (171)
                      +.|..|+++.+++  -..|| ||.+||+.+-
T Consensus        14 ~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~   44 (72)
T d1dvpa2          14 RVCHRCRVEFTFTNRKHHCRNCGQVFCGQCT   44 (72)
T ss_dssp             SBCTTTCCBCCSSSCCEECTTTCCEECSTTS
T ss_pred             CccccCCCcccCccccccccccCCeeChhhh
Confidence            5799999999997  48999 9999998874

>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: vps27p protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.21  E-value=0.0087  Score=39.02  Aligned_cols=27  Identities=37%  Similarity=1.001  Sum_probs=23.8

Q ss_pred             Ccccccccccccc--cceee-cCccccCCc
Q 030772          110 NRCSFCRKRIGLT--GFKCR-CEQTFCSLH  136 (171)
Q Consensus       110 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      +.|..|+++.+|+  -..|| ||.+||+.+
T Consensus         6 ~~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   35 (67)
T d1vfya_           6 DACMICSKKFSLLNRKHHCRSCGGVFCQEH   35 (67)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred             cccccCCCcccCcccccccccCCCEecccc
Confidence            4699999999996  48999 999999876

>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Eea1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.19  E-value=0.016  Score=37.39  Aligned_cols=28  Identities=32%  Similarity=0.825  Sum_probs=24.4

Q ss_pred             CCcccccccccccc--cceee-cCccccCCc
Q 030772          109 ANRCSFCRKRIGLT--GFKCR-CEQTFCSLH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++.+++  -..|| ||.+||+..
T Consensus         8 ~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~C   38 (64)
T d1joca1           8 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC   38 (64)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCcCcCcCCcccCCccccchhhhCCeecccc
Confidence            46799999999997  48899 999999865

>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Effector domain of rabphilin-3a
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.98  E-value=0.037  Score=39.57  Aligned_cols=31  Identities=26%  Similarity=0.823  Sum_probs=25.6

Q ss_pred             CCCCcccccccccccc---cceee-cCccccCCcC
Q 030772          107 RPANRCSFCRKRIGLT---GFKCR-CEQTFCSLHR  137 (171)
Q Consensus       107 ~~~~rC~~C~kkvgl~---gf~Cr-Cg~~FC~~HR  137 (171)
                      ...+.|..|++.++++   +..|| ||.+||+.=+
T Consensus        46 ~~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~   80 (124)
T d1zbdb_          46 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG   80 (124)
T ss_dssp             CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred             cCCCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence            3468899999999964   57899 9999999854

>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Rififylin (FYVE-RING finger protein Sakura)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.88  E-value=0.036  Score=34.49  Aligned_cols=26  Identities=27%  Similarity=0.708  Sum_probs=22.7

Q ss_pred             cccccccccccc--cceee-cCccccCCc
Q 030772          111 RCSFCRKRIGLT--GFKCR-CEQTFCSLH  136 (171)
Q Consensus       111 rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      -|..|+++.+++  -..|| ||.+||+..
T Consensus         2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   30 (51)
T d1y02a2           2 SCKSCGAHFANTARKQTCLDCKKNFCMTC   30 (51)
T ss_dssp             CCTTTCCCCSSGGGCEECTTTCCEECGGG
T ss_pred             CccccCCcccCCccCcccccCCcccCccc
Confidence            388999999996  48999 999999876

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=80.75  E-value=0.77  Score=28.81  Aligned_cols=42  Identities=26%  Similarity=0.446  Sum_probs=29.4

Q ss_pred             CCCcccccccccc-c--ccceee-cCccccCCcCCCCCCCCCccch
Q 030772          108 PANRCSFCRKRIG-L--TGFKCR-CEQTFCSLHRYSDKHNCVFDYK  149 (171)
Q Consensus       108 ~~~rC~~C~kkvg-l--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  149 (171)
                      .+..|..|++.|- +  .||+|+ |+.+.=....-.=...|..++.
T Consensus        18 ~~~~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~~~   63 (66)
T d1tbna_          18 SPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHT   63 (66)
T ss_dssp             SCCBCSSSCCBCCTTSSSCEEETTTCCEECTTTTTTSCCCSSCCCC
T ss_pred             CCcCCcCCCCcccCcccCccccCcccCeEChHHhccccccCCCCcc
Confidence            4578999999884 4  389999 9887655554444456766654