Citrus Sinensis ID: 030813

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
Protein Sequence
MATAGSAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCFTYL
Secondary Structure (PSIPRED)
cccccccccccEEEEEEEcccHHcHHHHHHHHHHHHHHHHHccccccccccccEEEEccHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccEEEEEEEcccccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHccccccEHHHHEEEEccccHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHcccEEEEcccHHHcccEEEEcccHccccc
Coil and Loop (DISEMBL)
matagsaegkkITVLSidgggirgiiPGTILAFLESKLqeldgpsariaDYFDVVAGTSTGGLVTTmltapnkeggpfiaakdinnfylehgpkifpqisrsnfsesIASSIdkrllgpkydgKYLRALVNELLGdvtvketltnvviptfdikllqpvifstTDVCFTYL
Flexible Loop (DISEMBL)
matagsaegkkitvlsidgggirGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVviptfdikllqpvifsttdvcftyl
Low Complexity Region (SEG)
MATAGSAEGKKITVLSidgggirgiipgtiLAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCFTYL
Disordered region (IsUnstruct)
***********ITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCFTY*
Disordered Region (DISOPRED)
************TVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDV****L
Disordered Region (DISEMBL)
*********KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCFTYL
Disordered Region (DISPRO)
******AEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATAGSAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCFTYL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	171	2.2.26 [Sep-21-2011]
Q2MY58	387	Patatin group A-3 OS=Sola	N/A	no	0.836	0.369	0.522	9e-41
P15478	386	Patatin-T5 OS=Solanum tub	N/A	no	0.847	0.375	0.562	2e-35
Q8LPW4	386	Patatin-17 OS=Solanum car	N/A	no	0.847	0.375	0.537	3e-35
Q3YJT2	386	Patatin-2-Kuras 2 OS=Sola	N/A	no	0.847	0.375	0.543	3e-34
Q3YJT3	374	Patatin-2-Kuras 1 OS=Sola	N/A	no	0.894	0.409	0.532	5e-34
Q42502	386	Patatin-2-Kuras 3 OS=Sola	N/A	no	0.847	0.375	0.543	8e-34
Q2MY38	387	Patatin-13 OS=Solanum tub	N/A	no	0.853	0.377	0.518	4e-33
P07745	386	Patatin OS=Solanum tubero	N/A	no	0.847	0.375	0.543	5e-33
Q3YJT0	374	Patatin-2-Kuras 4 OS=Sola	N/A	no	0.847	0.387	0.55	6e-33
Q2MY44	386	Patatin-07 OS=Solanum tub	N/A	no	0.830	0.367	0.547	1e-32

>sp|Q2MY58|PATA3_SOLTU Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1

 Score =  166 bits (419), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 82/157 (52%), Positives = 107/157 (68%), Gaps = 14/157 (8%)

Query: 12  ITVLSIDGGGIRGIIPGTILAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTA 70
           +TVLSIDGGG++GIIPGTIL FLE +LQ++D  + AR+ADYFDV+ GTSTGGL+T M+T 
Sbjct: 29  VTVLSIDGGGVKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITT 88

Query: 71  PNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALV 130
           PN+   PF AA +I  FY EHGP IF             +S   +  GPKYDGKYL  ++
Sbjct: 89  PNENNRPFAAANEIVPFYFEHGPHIF-------------NSSTGQFFGPKYDGKYLMQVL 135

Query: 131 NELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167
            E LG+  V + LT V I +FDIK  +PVIF+ +++ 
Sbjct: 136 QEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 172

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.
Solanum tuberosum (taxid: 4113)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|P15478|PATT5_SOLTU Patatin-T5 OS=Solanum tuberosum PE=1 SV=1

 Score =  148 bits (374), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/160 (56%), Positives = 111/160 (69%), Gaps = 15/160 (9%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTM 67
           G+ +TVLSIDGGGI+GIIP TIL FLE +LQE+D  + AR+ADYFDV+ GTSTGGL+T M
Sbjct: 26  GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTSTGGLLTAM 85

Query: 68  LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
           +T PN+   PF AAKDI  FY EHGPKIF Q S S F             GPKYDGKYL 
Sbjct: 86  ITTPNETNRPFAAAKDIVPFYFEHGPKIF-QSSGSIF-------------GPKYDGKYLM 131

Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167
            ++ E LG+  V + LT V I +FDIK  +PVIF+ +++ 
Sbjct: 132 QVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 171

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8LPW4|PAT17_SOLCD Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1

 Score =  147 bits (372), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/160 (53%), Positives = 112/160 (70%), Gaps = 15/160 (9%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTM 67
           G+ +TVLSIDGGGIRGIIP TIL FLE +LQE+D  + AR+ADYFDV+ GTSTGGL+T M
Sbjct: 26  GEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAM 85

Query: 68  LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
           ++ PN+   PF AAK+I  FY EHGP+IF              +   ++LGPKYDGKYL 
Sbjct: 86  ISTPNENNRPFAAAKEIVPFYFEHGPQIF--------------NPSGQILGPKYDGKYLM 131

Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167
            ++ E LG+  V + LT VVI +FDIK  +PVIF+ +++ 
Sbjct: 132 QVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLA 171

Non-specific lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens (By similarity). Catalyzes the non-specific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols includng p-nitrophenyl caprate. Confers resistance to southern corn rootworm (SCRW).

Solanum cardiophyllum (taxid: 160510)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q3YJT2|PT2K2_SOLTU Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 PE=2 SV=1

 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/160 (54%), Positives = 108/160 (67%), Gaps = 15/160 (9%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTM 67
           G+ +TVLSIDGGGI+GIIP  IL FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M
Sbjct: 26  GEMVTVLSIDGGGIKGIIPAVILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAM 85

Query: 68  LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
           +T PN+   PF AAKDI  FY EHGP IF      N+S SI         GP YDGKYL 
Sbjct: 86  ITTPNENNRPFAAAKDIIPFYFEHGPHIF------NYSGSI--------FGPMYDGKYLL 131

Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167
            ++ E LG+  V + LT V I +FDIK  +PVIF+ +++ 
Sbjct: 132 QVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 171

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q3YJT3|PT2K1_SOLTU Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 PE=1 SV=1

 Score =  143 bits (361), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/171 (53%), Positives = 113/171 (66%), Gaps = 18/171 (10%)

Query: 1   MATAGSAE---GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDG-PSARIADYFDVVA 56
           +AT GS     G+ +TVLSIDGGGI+GIIP TIL FLE +LQE+D    AR+ADYFDV+ 
Sbjct: 3   LATTGSTCATLGEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNKDARLADYFDVIG 62

Query: 57  GTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRL 116
           GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N S +I        
Sbjct: 63  GTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NSSGTI-------- 108

Query: 117 LGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167
            GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ +++ 
Sbjct: 109 FGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 159

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q42502|PT2K3_SOLTU Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 PE=1 SV=1

 Score =  142 bits (359), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 87/160 (54%), Positives = 107/160 (66%), Gaps = 15/160 (9%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTM 67
           G+ +TVLSIDGGGI+GIIP TIL FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M
Sbjct: 26  GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAM 85

Query: 68  LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
           +T PN+   PF AAKDI  FY EHGP IF      N S SI         GP YDGKY  
Sbjct: 86  ITTPNENNRPFAAAKDIVPFYFEHGPHIF------NSSGSI--------FGPMYDGKYFL 131

Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167
            ++ E LG+  V + LT V I +FDIK  +PVIF+ +++ 
Sbjct: 132 QVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 171

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q2MY38|PAT13_SOLTU Patatin-13 OS=Solanum tuberosum PE=2 SV=1

 Score =  140 bits (353), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/160 (51%), Positives = 108/160 (67%), Gaps = 14/160 (8%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTM 67
           G+ +TVLS+DGGGI+GIIPG IL FLE +LQ++D  + AR+ADYFDV+ GTSTGGL+T M
Sbjct: 26  GEMVTVLSVDGGGIKGIIPGIILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAM 85

Query: 68  LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
           +T PN+   PF AAKDI  FY +HGP IF             +S   +  GPKYDGKYL 
Sbjct: 86  ITTPNENNRPFAAAKDIVPFYFQHGPHIF-------------NSSTGQFFGPKYDGKYLM 132

Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167
            +  E LG+  V + LT V I +FDIK  +PVIF+ +++ 
Sbjct: 133 QVPQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 172

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P07745|PAT0_SOLTU Patatin OS=Solanum tuberosum PE=3 SV=1

 Score =  140 bits (352), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/160 (54%), Positives = 109/160 (68%), Gaps = 15/160 (9%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTM 67
           G+ +TVLSIDGGGI+GIIP  IL FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M
Sbjct: 26  GEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAM 85

Query: 68  LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
           +T PN+   PF AAKDI  FY EHGP IF      N+S SI         GP+YDGKYL 
Sbjct: 86  ITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLL 131

Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167
            ++ E LG+  V + LT V I +FDIK  +PVIF+ +++ 
Sbjct: 132 QVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 171

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q3YJT0|PT2K4_SOLTU Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1

 Score =  139 bits (351), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/160 (55%), Positives = 110/160 (68%), Gaps = 15/160 (9%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTM 67
           G+ +TVLSIDGGGI+GIIP  IL FLE +LQE+D  + AR+ADYFDV+ GTSTGGL+T M
Sbjct: 14  GEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNADARLADYFDVIGGTSTGGLLTAM 73

Query: 68  LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
           +T PN+   PF AAKDI  FY EHGP IF      N+S SI        LGP YDGKYL 
Sbjct: 74  ITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------LGPMYDGKYLL 119

Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167
            ++ E LG+  V + LT V I +FDIK  +PVIF+ +++ 
Sbjct: 120 QVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 159

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q2MY44|PAT07_SOLTU Patatin-07 OS=Solanum tuberosum PE=2 SV=1

 Score =  139 bits (349), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 15/157 (9%)

Query: 12  ITVLSIDGGGIRGIIPGTILAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTA 70
           +TVLSIDGGGI+GIIP  IL FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T 
Sbjct: 29  VTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITT 88

Query: 71  PNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALV 130
           PN+   PF AAKDI  FY EHGP IF      N+S SI         GP+YDGKYL  ++
Sbjct: 89  PNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLMQVL 134

Query: 131 NELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167
            E LG+  V + LT V I +FDIK  +PVIF+ +++ 
Sbjct: 135 QEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 171

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
225470462	397	PREDICTED: patatin group A-3-like [Vitis	0.964	0.415	0.674	2e-56
147816211	397	hypothetical protein VITISV_024099 [Viti	0.964	0.415	0.668	8e-56
242081739	438	hypothetical protein SORBIDRAFT_07g02320	0.906	0.353	0.675	9e-55
357148061	425	PREDICTED: patatin group A-3-like [Brach	0.888	0.357	0.677	1e-54
357141605	429	PREDICTED: patatin group A-3-like [Brach	0.888	0.354	0.685	1e-54
296084716	378	unnamed protein product [Vitis vinifera]	0.859	0.388	0.714	2e-54
357148108	424	PREDICTED: patatin group A-3-like [Brach	0.883	0.356	0.687	2e-54
115476892	430	Os08g0476900 [Oryza sativa Japonica Grou	0.871	0.346	0.664	4e-54
326488817	426	predicted protein [Hordeum vulgare subsp	0.923	0.370	0.640	4e-54
222640734	437	hypothetical protein OsJ_27669 [Oryza sa	0.871	0.340	0.664	5e-54

>gi|225470462|ref|XP_002262942.1| PREDICTED: patatin group A-3-like [Vitis vinifera]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 114/169 (67%), Positives = 136/169 (80%), Gaps = 4/169 (2%)

Query: 1   MATAGSAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTST 60
           MAT+   +G+ +TVLSIDGGG+RGIIPGT+LAFLESK QELDG  ARIADYFDV+AGTST
Sbjct: 1   MATS-FGKGRMVTVLSIDGGGVRGIIPGTLLAFLESKFQELDGDDARIADYFDVIAGTST 59

Query: 61  GGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIAS---SIDKRLL 117
           GGLVT MLTAPNK+  P  AAKDIN+FYL+H P+IFPQ  R +F +S  S   S+   + 
Sbjct: 60  GGLVTAMLTAPNKDNRPVFAAKDINSFYLDHCPEIFPQNRRISFGKSTISRFGSLIDAVR 119

Query: 118 GPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDV 166
           GPKY+GKYL++L  +LL  V +K+TLTNVVIPTFDIKLLQPVIFST + 
Sbjct: 120 GPKYNGKYLQSLAVDLLDKVYLKQTLTNVVIPTFDIKLLQPVIFSTDEA 168

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147816211|emb|CAN62059.1| hypothetical protein VITISV_024099 [Vitis vinifera]

 Score =  221 bits (563), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 113/169 (66%), Positives = 135/169 (79%), Gaps = 4/169 (2%)

Query: 1   MATAGSAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTST 60
           MAT+   +G+ +TVLSIDGGG+RGIIPGT+LAFLESK QELDG  ARIADYFDV+AGTST
Sbjct: 1   MATS-FGKGRMVTVLSIDGGGVRGIIPGTLLAFLESKFQELDGDDARIADYFDVIAGTST 59

Query: 61  GGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIAS---SIDKRLL 117
           GGLVT MLTAPNK+  P  AAKDIN+FYL+H P+IFPQ  R +F +S  S   S+   + 
Sbjct: 60  GGLVTAMLTAPNKDNRPXFAAKDINSFYLDHCPEIFPQNRRISFGKSTISRFGSLIDAVR 119

Query: 118 GPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDV 166
           GPKY+GKYL++L  +LL  V +K+TLTNVVIPTFDIKLLQPVIF T + 
Sbjct: 120 GPKYNGKYLQSLAVDLLDKVYLKQTLTNVVIPTFDIKLLQPVIFXTDEA 168

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242081739|ref|XP_002445638.1| hypothetical protein SORBIDRAFT_07g023200 [Sorghum bicolor] gi|241941988|gb|EES15133.1| hypothetical protein SORBIDRAFT_07g023200 [Sorghum bicolor]

 Score =  218 bits (554), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 108/160 (67%), Positives = 122/160 (76%), Gaps = 5/160 (3%)

Query: 7   AEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTT 66
           A G  +TVLSIDGGG+RGIIPGTIL FLE KLQELDGP AR+ADYFDV+AGTSTGGLVT 
Sbjct: 47  AYGSIVTVLSIDGGGVRGIIPGTILGFLEEKLQELDGPDARLADYFDVIAGTSTGGLVTA 106

Query: 67  MLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYL 126
           MLTAPNK+G P  AAKDIN+FYLEH PKIFP  S           + K + GPKYDGKYL
Sbjct: 107 MLTAPNKDGRPLFAAKDINDFYLEHCPKIFPSGSSGG-----PLGLFKSMAGPKYDGKYL 161

Query: 127 RALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDV 166
            ++V ELLG+  V + L N+VIPTFDIKLLQP +FS  D 
Sbjct: 162 HSIVRELLGETRVSQALQNIVIPTFDIKLLQPTVFSRYDA 201

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357148061|ref|XP_003574610.1| PREDICTED: patatin group A-3-like [Brachypodium distachyon]

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 107/158 (67%), Positives = 121/158 (76%), Gaps = 6/158 (3%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTML 68
           G  +TVLSIDGGG+RGIIPGTILAFLE KLQE+DGP ARIADYFDV+AGTSTGGLVT ML
Sbjct: 41  GNIVTVLSIDGGGVRGIIPGTILAFLEEKLQEIDGPEARIADYFDVIAGTSTGGLVTAML 100

Query: 69  TAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRA 128
           TAPNK+G P  AAKDIN FYL+H PKIFP  S   F       + K + GPKYDG+YL +
Sbjct: 101 TAPNKDGRPLFAAKDINKFYLDHCPKIFPAASSWPF------GLWKTMTGPKYDGQYLHS 154

Query: 129 LVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDV 166
           +V ELLG   V + L N+V+PTFDIKLLQP IFS  D 
Sbjct: 155 IVKELLGGTRVSQALQNIVVPTFDIKLLQPTIFSKYDA 192

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357141605|ref|XP_003572284.1| PREDICTED: patatin group A-3-like [Brachypodium distachyon]

 Score =  217 bits (552), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 109/159 (68%), Positives = 126/159 (79%), Gaps = 7/159 (4%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTML 68
           G  +TVLSIDGGG+RGIIPGTILAFLE KLQELDGP ARIADYFDV+AGTSTGGLVT ML
Sbjct: 44  GSIVTVLSIDGGGVRGIIPGTILAFLEEKLQELDGPEARIADYFDVIAGTSTGGLVTAML 103

Query: 69  TAPNK-EGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
           TAPN  +G P  AAKDIN+FYL+H PKIFP IS+  F       + K + GPKYDG+YL 
Sbjct: 104 TAPNDVDGRPLFAAKDINSFYLDHCPKIFPPISKGPF------GLLKSMAGPKYDGEYLH 157

Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDV 166
           ++V +LLGD  V++TL N+VIPTFDIK +QP IFST D 
Sbjct: 158 SIVKKLLGDTRVRDTLKNIVIPTFDIKHMQPTIFSTYDA 196

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084716|emb|CBI25858.3| unnamed protein product [Vitis vinifera]

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/154 (71%), Positives = 126/154 (81%), Gaps = 7/154 (4%)

Query: 12  ITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP 71
           +TVLSIDGGG+RGIIPGT+LAFLESK QELDG  ARIADYFDV+AGTSTGGLVT MLTAP
Sbjct: 2   VTVLSIDGGGVRGIIPGTLLAFLESKFQELDGDDARIADYFDVIAGTSTGGLVTAMLTAP 61

Query: 72  NKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVN 131
           NK+  P  AAKDIN+FYL+H P+IFPQ SR        S ID  + GPKY+GKYL++L  
Sbjct: 62  NKDNRPVFAAKDINSFYLDHCPEIFPQNSR------FGSLIDA-VRGPKYNGKYLQSLAV 114

Query: 132 ELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD 165
           +LL  V +K+TLTNVVIPTFDIKLLQPVIFST +
Sbjct: 115 DLLDKVYLKQTLTNVVIPTFDIKLLQPVIFSTDE 148

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357148108|ref|XP_003574631.1| PREDICTED: patatin group A-3-like [Brachypodium distachyon]

 Score =  216 bits (551), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 108/157 (68%), Positives = 120/157 (76%), Gaps = 6/157 (3%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTML 68
           G  +TVLSIDGGG+RGIIPGTILAFLE KLQ+LD P ARIADYFDV+AGTSTGGLVT ML
Sbjct: 40  GNIVTVLSIDGGGVRGIIPGTILAFLEEKLQDLDEPEARIADYFDVIAGTSTGGLVTAML 99

Query: 69  TAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRA 128
           TAPNKEG P  AAKDIN FYL+H PKIFP +S   F         K + GPKYDG+YL +
Sbjct: 100 TAPNKEGRPLFAAKDINKFYLDHCPKIFPPVSNWPF------GFFKTMTGPKYDGRYLHS 153

Query: 129 LVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD 165
           +V ELLG   V + L N+VIPTFDIKLLQP IFS  D
Sbjct: 154 IVKELLGATRVSQALQNIVIPTFDIKLLQPTIFSKYD 190

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115476892|ref|NP_001062042.1| Os08g0476900 [Oryza sativa Japonica Group] gi|42408062|dbj|BAD09204.1| putative latex protein allergen [Oryza sativa Japonica Group] gi|113624011|dbj|BAF23956.1| Os08g0476900 [Oryza sativa Japonica Group] gi|215715312|dbj|BAG95063.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  215 bits (548), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 103/155 (66%), Positives = 123/155 (79%), Gaps = 6/155 (3%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTML 68
           G  +TVLSIDGGG+RGIIPGTILAFLE KLQELDGP AR+A+YFDV+AGTSTGGLVT ML
Sbjct: 44  GSIVTVLSIDGGGVRGIIPGTILAFLEEKLQELDGPEARLANYFDVIAGTSTGGLVTAML 103

Query: 69  TAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRA 128
           TAPN  G P  AA+DIN+FYLEH P+IFP +S+          + K + GPKYDG++L +
Sbjct: 104 TAPNDNGDPLFAARDINDFYLEHCPRIFPPVSKGPL------GLFKSMTGPKYDGRHLHS 157

Query: 129 LVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFST 163
           +V +LLGD  V  T+TN+V+PTFDIKLLQP IFST
Sbjct: 158 VVQQLLGDKRVDSTITNIVVPTFDIKLLQPTIFST 192

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326488817|dbj|BAJ98020.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  215 bits (548), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 105/164 (64%), Positives = 124/164 (75%), Gaps = 6/164 (3%)

Query: 2   ATAGSAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTG 61
           A+     G+ +TVLSIDGGG+RGIIPGTILAFLE KLQELDGP  RIADYFDVVAGTSTG
Sbjct: 27  ASPQPRHGRLVTVLSIDGGGVRGIIPGTILAFLEQKLQELDGPDVRIADYFDVVAGTSTG 86

Query: 62  GLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKY 121
           GLV  MLTAPN EG P  AAKDIN FYL+H P IFP + +          + + ++GPKY
Sbjct: 87  GLVAAMLTAPNAEGRPLFAAKDINKFYLDHCPNIFPAVCKGPL------GLFRSMMGPKY 140

Query: 122 DGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD 165
           +G++L ++V ELLGD  V +TL ++VIPTFDIKLLQP IFST D
Sbjct: 141 NGQHLHSVVKELLGDTRVGQTLKSIVIPTFDIKLLQPTIFSTYD 184

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222640734|gb|EEE68866.1| hypothetical protein OsJ_27669 [Oryza sativa Japonica Group]

 Score =  215 bits (547), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 103/155 (66%), Positives = 123/155 (79%), Gaps = 6/155 (3%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTML 68
           G  +TVLSIDGGG+RGIIPGTILAFLE KLQELDGP AR+A+YFDV+AGTSTGGLVT ML
Sbjct: 44  GSIVTVLSIDGGGVRGIIPGTILAFLEEKLQELDGPEARLANYFDVIAGTSTGGLVTAML 103

Query: 69  TAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRA 128
           TAPN  G P  AA+DIN+FYLEH P+IFP +S+          + K + GPKYDG++L +
Sbjct: 104 TAPNDNGDPLFAARDINDFYLEHCPRIFPPVSKGPL------GLFKSMTGPKYDGRHLHS 157

Query: 129 LVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFST 163
           +V +LLGD  V  T+TN+V+PTFDIKLLQP IFST
Sbjct: 158 VVQQLLGDKRVDSTITNIVVPTFDIKLLQPTIFST 192

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
TAIR|locus:2066286	407	PLA2A "phospholipase A 2A" [Ar	0.906	0.380	0.588	1.9e-42
TAIR|locus:2114995	414	PLP1 [Arabidopsis thaliana (ta	0.888	0.367	0.567	1.4e-39
TAIR|locus:2115065	428	PLP4 "AT4G37050" [Arabidopsis	0.894	0.357	0.506	4.6e-34
TAIR|locus:2158337	401	AT5G43590 [Arabidopsis thalian	0.871	0.371	0.519	4.7e-32
TAIR|locus:2056088	499	PLP6 "PATATIN-like protein 6"	0.900	0.308	0.322	7.8e-13
TAIR|locus:2082702	488	pPLAIIIbeta "patatin-related p	0.929	0.325	0.307	3.3e-12
TAIR|locus:2077269	384	PLP9 "PATATIN-like protein 9"	0.853	0.380	0.277	8.7e-11
UNIPROTKB|Q9KVG8	355	VC0178 "Patatin-related protei	0.842	0.405	0.262	1.8e-07
TIGR_CMR|VC_0178	355	VC_0178 "patatin family protei	0.842	0.405	0.262	1.8e-07

TAIR|locus:2066286 PLA2A "phospholipase A 2A" [Arabidopsis thaliana (taxid:3702)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 93/158 (58%), Positives = 109/158 (68%)

Query:     9 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTML 68
             G  +T+LS              L FLES+LQ+LDG  AR+ADYFDV+AGTSTGGLVT ML
Sbjct:    16 GNLVTILSIDGGGIRGLIPAVILGFLESELQKLDGEEARLADYFDVIAGTSTGGLVTAML 75

Query:    69 TAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRA 128
             TAPNKEG P  AA +I +FYLE  PKIFPQ    +F  S A  + K L GPKYDGKYL  
Sbjct:    76 TAPNKEGRPLFAASEIKDFYLEQCPKIFPQ---DHFPFSAAKKLVKSLTGPKYDGKYLHQ 132

Query:   129 LVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDV 166
             L++  LGD  + +TLTNVVIPTFDIK LQP IFS+ +V
Sbjct:   133 LIHAKLGDTKLSQTLTNVVIPTFDIKHLQPTIFSSYEV 170

GO:0006629 "lipid metabolic process" evidence=IEA;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009626 "plant-type hypersensitive response" evidence=IEP;IMP

GO:0016020 "membrane" evidence=IDA

GO:0016298 "lipase activity" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0008219 "cell death" evidence=IGI

GO:0031408 "oxylipin biosynthetic process" evidence=IMP

GO:0051607 "defense response to virus" evidence=IMP

GO:0071456 "cellular response to hypoxia" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009646 "response to absence of light" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0051707 "response to other organism" evidence=RCA

TAIR|locus:2114995 PLP1 [Arabidopsis thaliana (taxid:3702)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 88/155 (56%), Positives = 107/155 (69%)

Query:     9 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTML 68
             G  +T+LS              LAFLE +LQELDG  AR+ADYFDV+AGTSTGGLVT ML
Sbjct:    16 GSLVTILSLDGGGVRGIIAGVILAFLEKQLQELDGEEARLADYFDVIAGTSTGGLVTAML 75

Query:    69 TAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRA 128
             T P++ G P  AAKDI  FYLEH PKIFPQ +      ++   + K L GPKY GKYLR 
Sbjct:    76 TVPDETGRPHFAAKDIVPFYLEHCPKIFPQPTGVL---ALLPKLPKLLSGPKYSGKYLRN 132

Query:   129 LVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFST 163
             L+++LLG+  + +TLTN+VIPTFDIK LQP IFS+
Sbjct:   133 LLSKLLGETRLHQTLTNIVIPTFDIKKLQPTIFSS 167

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0004620 "phospholipase activity" evidence=IDA

GO:0010311 "lateral root formation" evidence=IMP

TAIR|locus:2115065 PLP4 "AT4G37050" [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 82/162 (50%), Positives = 104/162 (64%)

Query:     9 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTML 68
             G+ +T+LS              LA+LES+LQELDG  AR+ DYFDV++GTSTGGL+  ML
Sbjct:    32 GQLVTILSIDGGGIRGIIPGTILAYLESQLQELDGEEARLVDYFDVISGTSTGGLIVAML 91

Query:    69 TAPNKEGG-------PFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKY 121
             TA ++ GG       P   AK+I  FYL+H PKIFPQ  R  F      +I + + GPK+
Sbjct:    92 TAQDQSGGHSRNSNRPLFEAKEIVPFYLKHSPKIFPQ-PRGIFC-GWGETIVRLVGGPKF 149

Query:   122 DGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFST 163
             +GKYL  LV   LGD  + ++LTNVVIP FDIK LQPVIFS+
Sbjct:   150 NGKYLHDLVEGFLGDTKLTQSLTNVVIPCFDIKKLQPVIFSS 191

GO:0005575 "cellular_component" evidence=ND

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0004620 "phospholipase activity" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

TAIR|locus:2158337 AT5G43590 [Arabidopsis thaliana (taxid:3702)]

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 81/156 (51%), Positives = 97/156 (62%)

Query:     9 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGP-SARIADYFDVVAGTSTGGLVTTM 67
             G  +T+LS              LA LE  LQE+D   S R+ADYFDV+AGTSTGGL+T M
Sbjct:    11 GNLVTILSLDGGGVRGIIGGVILANLEKHLQEIDNDESVRLADYFDVIAGTSTGGLMTAM 70

Query:    68 LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
             LTAPN  G P  AAKDI  FYLE  PKIF     S + +  A      L  PKY+G+YL 
Sbjct:    71 LTAPNDSGRPLYAAKDIVPFYLEESPKIF---YGSKWWDPSALWA---LFRPKYNGEYLH 124

Query:   128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFST 163
               + E+LG+  + +TLTNVVIPTFDIK LQP IFS+
Sbjct:   125 TRLGEILGETKLDQTLTNVVIPTFDIKKLQPTIFSS 160

GO:0005634 "nucleus" evidence=ISM

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0045735 "nutrient reservoir activity" evidence=ISS

TAIR|locus:2056088 PLP6 "PATATIN-like protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 7.8e-13, P = 7.8e-13
 Identities = 52/161 (32%), Positives = 75/161 (46%)

Query:    11 KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLT 69
             K+ VLS              LA+LE  L+   G P+ARIADYFDV +G+  GG+ T ML 
Sbjct:   107 KVCVLSIDSGGMRGIIPGKALAYLEHALKSKSGDPNARIADYFDVASGSGIGGIFTAMLF 166

Query:    70 APNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKY-DGKYLRA 128
             A +    P   A+D   F    G   +   ++S     I + + K   G     G  L  
Sbjct:   167 ASSDGNRPIFKAEDTWRFLAMKGKSFY---NKS--PPGILNRVMKTGSGGSGGSGSKLEK 221

Query:   129 LVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCFT 169
              + E   ++T+K+TL  V+IP +D+    P +FS  D   T
Sbjct:   222 AMKESFEELTLKDTLKPVLIPCYDLTSSAPFLFSRADALET 262

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0045735 "nutrient reservoir activity" evidence=ISS

TAIR|locus:2082702 pPLAIIIbeta "patatin-related phospholipase IIIbeta" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 52/169 (30%), Positives = 76/169 (44%)

Query:     4 AGSAEGK--KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTST 60
             AGS + +  KI +LS              LA+LE  L+   G P+ARIADYFDV AG+  
Sbjct:    88 AGSIKNQRGKICILSIDGGGMRGILPGKALAYLEHALKSKSGDPNARIADYFDVAAGSGI 147

Query:    61 GGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPK 120
             GG+ T ML        P   A D   F   +   ++           I   + +   G  
Sbjct:   148 GGIYTAMLFGSRDGNRPIFKADDTWQFLTRNAKGLYG-------GAGILKRVLRTGSGCC 200

Query:   121 YDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCFT 169
                  L+ ++ E   ++T+K+TL  V+IP +D+K   P +FS  D   T
Sbjct:   201 SGTAKLKKVMKESFSELTLKDTLKPVLIPCYDLKSSGPFLFSRADALET 249

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0051707 "response to other organism" evidence=IEP

GO:0004620 "phospholipase activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006644 "phospholipid metabolic process" evidence=IMP

GO:0019374 "galactolipid metabolic process" evidence=IMP

GO:0047617 "acyl-CoA hydrolase activity" evidence=IDA

TAIR|locus:2077269 PLP9 "PATATIN-like protein 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 8.7e-11, P = 8.7e-11
 Identities = 43/155 (27%), Positives = 72/155 (46%)

Query:    10 KKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTML 68
             +K  +LS              +  LE +++   G P A I+D+FD+VAGT  GG++  +L
Sbjct:    28 RKTRILSIDGGGTTGIVAAASILHLEHQIRLQTGDPHAHISDFFDIVAGTGIGGILAALL 87

Query:    69 TAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRA 128
              A +  G P   A+D   F  E   ++F +I  +          +KR  G   + + L  
Sbjct:    88 VADDGSGRPMFTARDAVKFVAEKNSELF-EIRYTGVFRR-----NKRYSGKSME-RVLET 140

Query:   129 LVNELLGDV-TVKETLTNVVIPTFDIKLLQPVIFS 162
                   G V T+K+T   +++P +D+K   P +FS
Sbjct:   141 AFRREDGKVLTMKDTCKPLLVPCYDLKTSAPFVFS 175

GO:0005576 "extracellular region" evidence=ISM

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0010075 "regulation of meristem growth" evidence=RCA

UNIPROTKB|Q9KVG8 VC0178 "Patatin-related protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 126 (49.4 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 41/156 (26%), Positives = 71/156 (45%)

Query:    11 KITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPSA-RIADYFDVVAGTSTGGLVTTMLT 69
             ++ +LS              LA +E  ++E  G +  ++ DYFD++ GTS GG++   L 
Sbjct:    13 QVRILSLNGGGARGLFTISLLAEIERIIEEKQGINGFKVGDYFDLITGTSIGGILALGL- 71

Query:    70 APNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLL-GPKYDGKYLRA 128
             A  K      +A+++ + + +    IFP+     F          RL  GP YD K L  
Sbjct:    72 AYGK------SARELEDVFRKQAGYIFPEQKYPRFFPVFRRRY--RLARGPLYDSKPLAK 123

Query:   129 LVNELLGDV-TVKETLTNVVIPTFDIKLLQPVIFST 163
              +  ++G+  T  +    V+IPT ++   +P  F T
Sbjct:   124 TIASMVGEESTFNDLKCRVLIPTVNLSTGKPQFFKT 159

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_0178 VC_0178 "patatin family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 126 (49.4 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 41/156 (26%), Positives = 71/156 (45%)

Query:    11 KITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPSA-RIADYFDVVAGTSTGGLVTTMLT 69
             ++ +LS              LA +E  ++E  G +  ++ DYFD++ GTS GG++   L 
Sbjct:    13 QVRILSLNGGGARGLFTISLLAEIERIIEEKQGINGFKVGDYFDLITGTSIGGILALGL- 71

Query:    70 APNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLL-GPKYDGKYLRA 128
             A  K      +A+++ + + +    IFP+     F          RL  GP YD K L  
Sbjct:    72 AYGK------SARELEDVFRKQAGYIFPEQKYPRFFPVFRRRY--RLARGPLYDSKPLAK 123

Query:   129 LVNELLGDV-TVKETLTNVVIPTFDIKLLQPVIFST 163
              +  ++G+  T  +    V+IPT ++   +P  F T
Sbjct:   124 TIASMVGEESTFNDLKCRVLIPTVNLSTGKPQFFKT 159


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.382    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      171       157   0.00079  106 3  11 22  0.37    32
                                                     30  0.42    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  544 (58 KB)
  Total size of DFA:  115 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.96u 0.18s 14.14t   Elapsed:  00:00:01
  Total cpu time:  13.96u 0.18s 14.14t   Elapsed:  00:00:01
  Start:  Mon May 20 19:13:45 2013   End:  Mon May 20 19:13:46 2013

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	171
cd07214	349	cd07214, Pat17_isozyme_like, Patatin-like phosphol	1e-84
cd07215	329	cd07215, Pat17_PNPLA8_PNPLA9_like2, Patatin-like p	3e-41
cd07199	258	cd07199, Pat17_PNPLA8_PNPLA9_like, Patatin-like ph	2e-28
COG3621	394	COG3621, COG3621, Patatin [General function predic	3e-17
cd07217	344	cd07217, Pat17_PNPLA8_PNPLA9_like4, Patatin-like p	6e-17
cd07213	288	cd07213, Pat17_PNPLA8_PNPLA9_like1, Patatin-like p	1e-11
cd07211	308	cd07211, Pat_PNPLA8, Patatin-like phospholipase do	4e-11
pfam01734	189	pfam01734, Patatin, Patatin-like phospholipase	7e-11
cd07216	309	cd07216, Pat17_PNPLA8_PNPLA9_like3, Patatin-like p	2e-10
cd07212	312	cd07212, Pat_PNPLA9, Patatin-like phospholipase do	1e-08
cd01819	155	cd01819, Patatin_and_cPLA2, Patatins and Phospholi	5e-06

>gnl|CDD|132853 cd07214, Pat17_isozyme_like, Patatin-like phospholipase of plants

 Score =  252 bits (646), Expect = 1e-84
 Identities = 111/157 (70%), Positives = 123/157 (78%), Gaps = 3/157 (1%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTML 68
           GK ITVLSIDGGGIRGIIP TIL FLE KLQELDGP ARIADYFDV+AGTSTGGL+T ML
Sbjct: 1   GKFITVLSIDGGGIRGIIPATILEFLEGKLQELDGPDARIADYFDVIAGTSTGGLITAML 60

Query: 69  TAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRA 128
           TAPN+   P  AAKDI  FYLE+GPKIFPQ +     +       + LLGPKYDG YL  
Sbjct: 61  TAPNENKRPLFAAKDIVQFYLENGPKIFPQSTGQFEDD---RKKLRSLLGPKYDGVYLHD 117

Query: 129 LVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD 165
           L+NELLGD  + +TLTNVVIPTFDIKLLQPVIFS++ 
Sbjct: 118 LLNELLGDTRLSDTLTNVVIPTFDIKLLQPVIFSSSK 154

Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates. Length = 349

>gnl|CDD|132854 cd07215, Pat17_PNPLA8_PNPLA9_like2, Patatin-like phospholipase of bacteria

 Score =  140 bits (355), Expect = 3e-41
 Identities = 69/149 (46%), Positives = 89/149 (59%), Gaps = 7/149 (4%)

Query: 14  VLSIDGGGIRGIIPGTILAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPN 72
           +LSIDGGGIRGIIP TIL  +E KLQ+  G P AR+ADYFD+VAGTSTGG++T +   PN
Sbjct: 2   ILSIDGGGIRGIIPATILVSVEEKLQKKTGNPEARLADYFDLVAGTSTGGILTCLYLCPN 61

Query: 73  KEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNE 132
           + G P  +AK+  NFYLE G  IF +    N  +S         L  KY  K L  ++ E
Sbjct: 62  ESGRPKFSAKEALNFYLERGNYIFKK-KIWNKIKSRGG-----FLNEKYSHKPLEEVLLE 115

Query: 133 LLGDVTVKETLTNVVIPTFDIKLLQPVIF 161
             GD  + E L   +I ++DI+   P  F
Sbjct: 116 YFGDTKLSELLKPCLITSYDIERRSPHFF 144

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum. Length = 329

>gnl|CDD|132838 cd07199, Pat17_PNPLA8_PNPLA9_like, Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17

 Score =  105 bits (264), Expect = 2e-28
 Identities = 48/152 (31%), Positives = 66/152 (43%), Gaps = 57/152 (37%)

Query: 14  VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNK 73
           +LS+DGGGIRGIIP  ILA LE +L    G  +RIAD FD++AGTSTGG++   L     
Sbjct: 1   ILSLDGGGIRGIIPAEILAELEKRL----GKPSRIADLFDLIAGTSTGGIIALGLAL--- 53

Query: 74  EGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNEL 133
                 +A+++   Y E G KIFP                                    
Sbjct: 54  ---GRYSAEELVELYEELGRKIFP------------------------------------ 74

Query: 134 LGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD 165
                       V++  +D+   +PV+FS  D
Sbjct: 75  -----------RVLVTAYDLSTGKPVVFSNYD 95

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum. Length = 258

>gnl|CDD|226148 COG3621, COG3621, Patatin [General function prediction only]

 Score = 77.2 bits (190), Expect = 3e-17
 Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 18/158 (11%)

Query: 11  KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTA 70
           K  +LS+DGGG+RG     IL      ++++ G    + +YFD++ GTS GG++   L  
Sbjct: 8   KYRILSLDGGGVRG----AILLEKLRIIEQIQGKK--LCEYFDLIGGTSIGGILALGLAL 61

Query: 71  P--NKEGGPFIAAKDINNFYLEHGPKIFPQIS-RSNFSESIASSIDKRLLGPKYDGKYLR 127
               +E     +A+    F  E   +IFP  + R   S +        L  PKY  + L 
Sbjct: 62  GKSPRELKQLFSAQQAQIFPEEMKHRIFPVGTFRQLLSYA--------LFSPKYSPQPLI 113

Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQ-PVIFSTT 164
            L+  +  D T+K+ +  VV+P +D+   + P+   +T
Sbjct: 114 KLLKFVCKDYTLKDLIGRVVVPGYDLNNQKNPLFTFST 151

Length = 394

>gnl|CDD|132856 cd07217, Pat17_PNPLA8_PNPLA9_like4, Patatin-like phospholipase

 Score = 76.0 bits (187), Expect = 6e-17
 Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 25/134 (18%)

Query: 10  KKITVLSIDGGGIRGIIPGTILAFLESKLQ-ELDGPSARIADYFDVVAGTSTGGLVTTML 68
           KKI  L++DGGGIRG++   IL  +E  L+  LD P  R+ DYFD V GTSTG ++   +
Sbjct: 1   KKI--LALDGGGIRGLLSVEILGRIEKDLRTHLDDPEFRLGDYFDFVGGTSTGSIIAACI 58

Query: 69  TAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKY--- 125
                     ++  D+ +FY  +G  +F +           + + +RL   K   +Y   
Sbjct: 59  ALG-------MSVTDLLSFYTLNGVNMFDK-----------AWLAQRLFLNKLYNQYDPT 100

Query: 126 -LRALVNELLGDVT 138
            L   +N +  + T
Sbjct: 101 NLGKKLNTVFPETT 114

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum. Length = 344

>gnl|CDD|132852 cd07213, Pat17_PNPLA8_PNPLA9_like1, Patatin-like phospholipase

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 24/140 (17%)

Query: 14  VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNK 73
           +LS+DGGG++GI+   +L  L  +            D  D+ AGTS G L+   L     
Sbjct: 4   ILSLDGGGVKGIVQLVLLKRLAEEFPSFL-------DQIDLFAGTSAGSLIALGLAL--- 53

Query: 74  EGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNEL 133
                 + + +   Y E G K+F   S +                       L+A     
Sbjct: 54  ----GYSPRQVLKLYEEVGLKVFS-KSSAGGGAGNNQYFAAGF---------LKAFAEVF 99

Query: 134 LGDVTVKETLTNVVIPTFDI 153
            GD+T+ +    V++P+F +
Sbjct: 100 FGDLTLGDLKRKVLVPSFQL 119

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum. Length = 288

>gnl|CDD|132850 cd07211, Pat_PNPLA8, Patatin-like phospholipase domain containing protein 8

 Score = 59.6 bits (145), Expect = 4e-11
 Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 29/163 (17%)

Query: 8   EGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTM 67
           +G+ I +LSIDGGG RG++   IL  +E    +       I + FD + G STG ++  +
Sbjct: 4   KGRGIRILSIDGGGTRGVVALEILRKIEKLTGK------PIHELFDYICGVSTGAILAFL 57

Query: 68  LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLL--GPKYDGKY 125
           L                    L+   +++ ++ +  FS++   S   RL+     YD + 
Sbjct: 58  LGLKKMS--------------LDECEELYRKLGKDVFSQNTYISGTSRLVLSHAYYDTET 103

Query: 126 LRALVNELLGDVTVKETLTNVVIPTF-------DIKLLQPVIF 161
              ++ E++G   + +T  +   P         +   L+P +F
Sbjct: 104 WEKILKEMMGSDELIDTSADPNCPKVACVSTQVNRTPLKPYVF 146

PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus. Length = 308

>gnl|CDD|216671 pfam01734, Patatin, Patatin-like phospholipase

 Score = 57.6 bits (139), Expect = 7e-11
 Identities = 31/146 (21%), Positives = 49/146 (33%), Gaps = 18/146 (12%)

Query: 15  LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKE 74
           L + GGG RG     +L  LE                FDV++GTS G +   +L      
Sbjct: 1   LVLSGGGARGAYHLGVLKALE-----------EAGLRFDVISGTSAGAINAALLALGGDP 49

Query: 75  GGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELL 134
                   ++    L          +    +            G  +DG  L  L+ +LL
Sbjct: 50  EEIL---DELLELKLNLFLSRLRLRAAGLLALLRGL----IGGGGLFDGDALEELLRKLL 102

Query: 135 GDVTVKETLTNVVIPTFDIKLLQPVI 160
           GD+T++E    + I    +     V 
Sbjct: 103 GDLTLEELAARLGILLVILVTPATVG 128

This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates. Length = 189

>gnl|CDD|132855 cd07216, Pat17_PNPLA8_PNPLA9_like3, Patatin-like phospholipase

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 15 LSIDGGGIRGIIPGTILAFLESKLQE--LDGPSARIADYFDVVAGTSTGGLVTTML 68
          LS+DGGG+RG+    IL  +  ++          +  DYFD++ GTSTGGL+  ML
Sbjct: 4  LSLDGGGVRGLSSLLILKEIMERIDPKEGLDEPPKPCDYFDLIGGTSTGGLIAIML 59

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum. Length = 309

>gnl|CDD|132851 cd07212, Pat_PNPLA9, Patatin-like phospholipase domain containing protein 9

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 6/55 (10%)

Query: 14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTML 68
          +L +DGGGIRG++   +L  +E   + L  P   I + FD +AGTSTGG++   L
Sbjct: 1  LLCLDGGGIRGLVLIQMLIAIE---KALGRP---IRELFDWIAGTSTGGILALAL 49

PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus. Length = 312

>gnl|CDD|132836 cd01819, Patatin_and_cPLA2, Patatins and Phospholipases

 Score = 43.9 bits (104), Expect = 5e-06
 Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 13/83 (15%)

Query: 15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP--- 71
          LS  GGG RG+    +L+ L  +            D    +AGTS G  V   L  P   
Sbjct: 1  LSFSGGGFRGMYHAGVLSALAERGLL---------DCVTYLAGTSGGAWVAATLYPPSSS 51

Query: 72 -NKEGGPFIAAKDINNFYLEHGP 93
           + +    +        ++   P
Sbjct: 52 LDNKPRQSLEEALSGKLWVSFTP 74

Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Length = 155

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	171
cd07214	349	Pat17_isozyme_like Patatin-like phospholipase of p	100.0
cd07215	329	Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipa	100.0
cd07211	308	Pat_PNPLA8 Patatin-like phospholipase domain conta	99.97
cd07217	344	Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipa	99.96
cd07216	309	Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipa	99.96
cd07212	312	Pat_PNPLA9 Patatin-like phospholipase domain conta	99.96
cd07213	288	Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipa	99.95
KOG4231	763	consensus Intracellular membrane-bound Ca2+-indepe	99.93
cd07205	175	Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholi	99.92
cd07207	194	Pat_ExoU_VipD_like ExoU and VipD-like proteins; ho	99.91
cd07228	175	Pat_NTE_like_bacteria Bacterial patatin-like phosp	99.9
cd07210	221	Pat_hypo_W_succinogenes_WS1459_like Hypothetical p	99.9
COG3621	394	Patatin [General function prediction only]	99.89
cd07225	306	Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domai	99.89
cd07199	258	Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipas	99.88
PRK10279	300	hypothetical protein; Provisional	99.86
cd07227	269	Pat_Fungal_NTE1 Fungal patatin-like phospholipase	99.86
cd07209	215	Pat_hypo_Ecoli_Z1214_like Hypothetical patatin sim	99.82
cd07218	245	Pat_iPLA2 Calcium-independent phospholipase A2; Cl	99.82
cd07208	266	Pat_hypo_Ecoli_yjju_like Hypothetical patatin simi	99.82
cd07204	243	Pat_PNPLA_like Patatin-like phospholipase domain c	99.81
cd07222	246	Pat_PNPLA4 Patatin-like phospholipase domain conta	99.81
cd07221	252	Pat_PNPLA3 Patatin-like phospholipase domain conta	99.8
cd07219	382	Pat_PNPLA1 Patatin-like phospholipase domain conta	99.79
cd07198	172	Patatin Patatin-like phospholipase. Patatin is a s	99.79
COG1752	306	RssA Predicted esterase of the alpha-beta hydrolas	99.78
cd07220	249	Pat_PNPLA2 Patatin-like phospholipase domain conta	99.78
cd07232	407	Pat_PLPL Patain-like phospholipase. Patatin-like p	99.74
cd07230	421	Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TG	99.73
cd07224	233	Pat_like Patatin-like phospholipase. Patatin-like	99.7
cd07229	391	Pat_TGL3_like Triacylglycerol lipase 3. Triacylgly	99.7
cd07223	405	Pat_PNPLA5-mammals Patatin-like phospholipase doma	99.68
KOG2968	1158	consensus Predicted esterase of the alpha-beta hyd	99.63
cd07231	323	Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar	99.48
PF01734	204	Patatin: Patatin-like phospholipase This Prosite f	99.46
TIGR03607	739	patatin-related protein. This bacterial protein fa	99.42
cd07206	298	Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and	99.39
cd01819	155	Patatin_and_cPLA2 Patatins and Phospholipases. Pat	99.39
COG4667	292	Predicted esterase of the alpha-beta hydrolase sup	99.38
KOG0513	503	consensus Ca2+-independent phospholipase A2 [Lipid	99.32
KOG2214	543	consensus Predicted esterase of the alpha-beta hyd	99.11
KOG3773	354	consensus Adiponutrin and related vesicular transp	98.39
cd00147	438	cPLA2_like Cytosolic phospholipase A2, catalytic d	98.35
KOG0513	503	consensus Ca2+-independent phospholipase A2 [Lipid	98.14
cd07202	430	cPLA2_Grp-IVC Group IVC cytoplasmic phospholipase	96.92
cd07201	541	cPLA2_Grp-IVB-IVD-IVE-IVF Group IVB, IVD, IVE, and	96.37
KOG1325	571	consensus Lysophospholipase [Lipid transport and m	95.48
cd07200	505	cPLA2_Grp-IVA Group IVA cytosolic phospholipase A2	95.33
cd07203	552	cPLA2_Fungal_PLB Fungal Phospholipase B-like; cPLA	95.1
PF01735	491	PLA2_B: Lysophospholipase catalytic domain; InterP	95.08
smart00022	549	PLAc Cytoplasmic phospholipase A2, catalytic subun	94.65
PF05728	187	UPF0227: Uncharacterised protein family (UPF0227);	80.45
TIGR01392	351	homoserO_Ac_trn homoserine O-acetyltransferase. Th	80.24
PRK00175	379	metX homoserine O-acetyltransferase; Provisional	80.21

>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants

Probab=100.00  E-value=3.5e-35  Score=243.79  Aligned_cols=157  Identities=72%  Similarity=1.105  Sum_probs=137.6

Q ss_pred             CCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHH
Q 030813            9 GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFY   88 (171)
Q Consensus         9 ~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~   88 (171)
                      .+++|||||||||+||++++++|++||++++++.|.+.++.+.||+|+|||+|||+|++|+.+...++|.++++|+.++|
T Consensus         1 ~~~~rILslDGGGiRGi~~a~iL~~lE~~l~~~~g~~~~i~~~FDliaGTStGgiiA~~la~~~~~~~p~~~~~e~~~~y   80 (349)
T cd07214           1 GKFITVLSIDGGGIRGIIPATILEFLEGKLQELDGPDARIADYFDVIAGTSTGGLITAMLTAPNENKRPLFAAKDIVQFY   80 (349)
T ss_pred             CCceEEEEECCCchhhHHHHHHHHHHHHHHHHhcCCCCCHhHhCCEEeeCCHHHHHHHHHhcCCCCCCCccCHHHHHHHH
Confidence            36789999999999999999999999999987777667899999999999999999999999877789999999999999


Q ss_pred             HhhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813           89 LEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF  168 (171)
Q Consensus        89 ~~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~  168 (171)
                      .+.+.++|.+.... + ..+ ..+++.+..++|+++.|+++|+++|++.+|.|+.++++|+|+|+.+++|++|+||+...
T Consensus        81 ~~~~~~iF~~~~~~-~-~~~-~~~~~~~~~~~y~~~~L~~~L~~~~gd~~l~d~~~~v~I~a~dl~~~~p~~F~~~~~~~  157 (349)
T cd07214          81 LENGPKIFPQSTGQ-F-EDD-RKKLRSLLGPKYDGVYLHDLLNELLGDTRLSDTLTNVVIPTFDIKLLQPVIFSSSKAKN  157 (349)
T ss_pred             HHhhHHhcCCCccc-c-hhH-HHHHHHhccCccCcHHHHHHHHHHhccccHhhhCCceEEEeEECCCCCeEEEeCccccC
Confidence            99999999776421 1 011 22344456789999999999999999999999999999999999999999999997653

Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.

>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria

Probab=100.00  E-value=1.3e-32  Score=226.83  Aligned_cols=149  Identities=45%  Similarity=0.720  Sum_probs=129.7

Q ss_pred             EEEEEeCCChhhHHHHHHHHHHHHHhhhcCCC-CCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhh
Q 030813           13 TVLSIDGGGIRGIIPGTILAFLESKLQELDGP-SARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEH   91 (171)
Q Consensus        13 ~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~-~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~   91 (171)
                      |||||||||+||++++.+|++||++++++.|. ++++++.||+|+|||+|||+|++++.+...++|.++++|+.++|.+.
T Consensus         1 rILslDGGGirG~~~~~iL~~le~~l~~~~g~~~~~i~~~fDli~GTStGgiia~~l~~~~~~g~~~~s~~e~~~~y~~~   80 (329)
T cd07215           1 RILSIDGGGIRGIIPATILVSVEEKLQKKTGNPEARLADYFDLVAGTSTGGILTCLYLCPNESGRPKFSAKEALNFYLER   80 (329)
T ss_pred             CEEEEcCChHHHHHHHHHHHHHHHHHhhhcCCCCCcHhhccCeeeccCHHHHHHHHHhCCCCCCCCCcCHHHHHHHHHHh
Confidence            69999999999999999999999998766554 36789999999999999999999987766688899999999999999


Q ss_pred             CCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCcc
Q 030813           92 GPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC  167 (171)
Q Consensus        92 ~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~  167 (171)
                      +.++|.....    ..+  .....+..++|++++|+++|+++|++.+|.|+.++++|+|+|+.++++++|+++...
T Consensus        81 ~~~IF~~~~~----~~~--~~~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~~~~~i~a~d~~~~~~~~f~~~~~~  150 (329)
T cd07215          81 GNYIFKKKIW----NKI--KSRGGFLNEKYSHKPLEEVLLEYFGDTKLSELLKPCLITSYDIERRSPHFFKSHTAI  150 (329)
T ss_pred             hHhhcccchh----hhh--hhhccccccccCcHHHHHHHHHHhCCCchhhhcCCceEEeeecCCCCceEecCcccC
Confidence            9999987542    111  112345678999999999999999999999999999999999999999999998753

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8

Probab=99.97  E-value=6.7e-30  Score=208.95  Aligned_cols=146  Identities=25%  Similarity=0.427  Sum_probs=119.1

Q ss_pred             CCCCCCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHH
Q 030813            5 GSAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDI   84 (171)
Q Consensus         5 ~~~~~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~   84 (171)
                      +|+.++++|+|||||||+||++++++|++||++++      .++++.||+|+|||+|||+|++|+.+.      ++++||
T Consensus         1 ~~~~~~~~riLsLdGGGirG~~~~~vL~~Le~~~~------~~i~~~fDli~GTStGgiiA~~la~~~------~~~~e~   68 (308)
T cd07211           1 PPVKGRGIRILSIDGGGTRGVVALEILRKIEKLTG------KPIHELFDYICGVSTGAILAFLLGLKK------MSLDEC   68 (308)
T ss_pred             CCCCCCCcEEEEECCChHHHHHHHHHHHHHHHHhC------CCchhhcCEEEecChhHHHHHHHhccc------ccHHHH
Confidence            58899999999999999999999999999999864      378899999999999999999999753      789999


Q ss_pred             HHHHHhhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccC----C-ceEEEeeeC--CCCC
Q 030813           85 NNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETL----T-NVVIPTFDI--KLLQ  157 (171)
Q Consensus        85 ~~~~~~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~----~-~~~i~a~di--~~~~  157 (171)
                      .++|.++..++|.....  . .   ......+..++|++++|+++|+++|++.++.|..    + +++|+++++  .+.+
T Consensus        69 ~~~y~~~~~~iF~~~~~--~-~---~~~~~~~~~~~y~~~~l~~~l~~~~g~~~l~~~~~~~~~p~~~v~st~~~~~~~~  142 (308)
T cd07211          69 EELYRKLGKDVFSQNTY--I-S---GTSRLVLSHAYYDTETWEKILKEMMGSDELIDTSADPNCPKVACVSTQVNRTPLK  142 (308)
T ss_pred             HHHHHHHHHHhcCCCcc--c-c---chhhhhccCCccChHHHHHHHHHHhCCccccccccCCCCCEEEEEEEeccCCCCc
Confidence            99999999999977541  1 0   0001123468999999999999999998887753    2 355666644  5678


Q ss_pred             eEEeeCCCccc
Q 030813          158 PVIFSTTDVCF  168 (171)
Q Consensus       158 ~~~f~~~~~~~  168 (171)
                      +++|+||+...
T Consensus       143 p~~f~ny~~~~  153 (308)
T cd07211         143 PYVFRNYNHPP  153 (308)
T ss_pred             eEEEeCCCCCC
Confidence            99999998653

PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.

>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase

Probab=99.96  E-value=2.2e-29  Score=208.51  Aligned_cols=140  Identities=27%  Similarity=0.418  Sum_probs=116.6

Q ss_pred             eEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCC-CCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813           12 ITVLSIDGGGIRGIIPGTILAFLESKLQELDGP-SARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE   90 (171)
Q Consensus        12 ~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~-~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~   90 (171)
                      .|||||||||+||++++++|++||+++++..+. +.++++.||+|+|||+|||+|++++.+       ++++|+.++|.+
T Consensus         1 ~rILsLDGGGiRGi~~~gvL~~LE~~l~~~~~~p~~~l~d~FDlIaGTStGgIIAa~la~g-------~s~~ei~~~y~~   73 (344)
T cd07217           1 KKILALDGGGIRGLLSVEILGRIEKDLRTHLDDPEFRLGDYFDFVGGTSTGSIIAACIALG-------MSVTDLLSFYTL   73 (344)
T ss_pred             CEEEEEcCCHHHHHHHHHHHHHHHHHhhhccCCccccccccccEEEEecHHHHHHHHHHcC-------CCHHHHHHHHHh
Confidence            479999999999999999999999998654433 357889999999999999999999976       689999999999


Q ss_pred             hCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCcccc--CCceEEEeeeCCCCCeEEeeCCC
Q 030813           91 HGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKET--LTNVVIPTFDIKLLQPVIFSTTD  165 (171)
Q Consensus        91 ~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~--~~~~~i~a~di~~~~~~~f~~~~  165 (171)
                      ...++|.....  .     ..+......+.|+.++|+++|+++|++.+|.|.  .+++.|+|+|+.++++++|+|+.
T Consensus        74 ~~~~iF~~~~~--~-----~~l~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~~~~~l~i~a~dl~tg~p~~f~~~~  143 (344)
T cd07217          74 NGVNMFDKAWL--A-----QRLFLNKLYNQYDPTNLGKKLNTVFPETTLGDDTLRTLLMIVTRNATTGSPWPVCNNP  143 (344)
T ss_pred             hhhhhcCchhh--h-----hhccccccccccCcHHHHHHHHHHcCceeecccccCceEEEEEEecCCCCeeEeecCc
Confidence            99999987531  1     011111112459999999999999999999984  46899999999999999999864

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase

Probab=99.96  E-value=7.1e-29  Score=203.08  Aligned_cols=143  Identities=27%  Similarity=0.413  Sum_probs=116.9

Q ss_pred             eEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCC--CCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813           12 ITVLSIDGGGIRGIIPGTILAFLESKLQELDGP--SARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL   89 (171)
Q Consensus        12 ~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~--~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~   89 (171)
                      +|||||||||+||++++++|++||++++++.|.  .+++++.||+|+|||+|||+|++|+..      +++++||.++|.
T Consensus         1 ~rILslDGGGiRGl~~~~iL~~le~~l~~~~~~~~~~~~~~~fDli~GTStGgiiA~~l~~~------~~t~~e~~~~y~   74 (309)
T cd07216           1 LNLLSLDGGGVRGLSSLLILKEIMERIDPKEGLDEPPKPCDYFDLIGGTSTGGLIAIMLGRL------RMTVDECIDAYT   74 (309)
T ss_pred             CcEEEEcCCchhHHHHHHHHHHHHHHhhhccccCCCCChhHhcCeeeeccHHHHHHHHhccc------CCCHHHHHHHHH
Confidence            489999999999999999999999998653332  357789999999999999999999842      379999999999


Q ss_pred             hhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCcc---------ccCCceEEEeeeCC-CCCeE
Q 030813           90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVK---------ETLTNVVIPTFDIK-LLQPV  159 (171)
Q Consensus        90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~---------d~~~~~~i~a~di~-~~~~~  159 (171)
                      ++..++|........       ......++.|+.+.+++++++++++..+.         +..++++|+++|++ +++++
T Consensus        75 ~~~~~iF~~~~~~~~-------~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~~~~  147 (309)
T cd07216          75 RLAKKIFSRKRLRLI-------IGDLRTGARFDSKKLAEAIKVILKELGNDEDDLLDEGEEDGCKVFVCATDKDVTGKAV  147 (309)
T ss_pred             HHhHHhCCCCCcccc-------ccccccCCCCChHHHHHHHHHHHHhcCCCchhhhccccccCCCEEEEEEeeCCCCceE
Confidence            999999987642111       01123457899999999999999865543         24568999999998 99999


Q ss_pred             EeeCCCcc
Q 030813          160 IFSTTDVC  167 (171)
Q Consensus       160 ~f~~~~~~  167 (171)
                      +|+||+..
T Consensus       148 ~f~~y~~~  155 (309)
T cd07216         148 RLRSYPSK  155 (309)
T ss_pred             EEecCCCC
Confidence            99999864

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9

Probab=99.96  E-value=2.9e-28  Score=199.66  Aligned_cols=123  Identities=26%  Similarity=0.403  Sum_probs=106.5

Q ss_pred             EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813           14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP   93 (171)
Q Consensus        14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~   93 (171)
                      ||||||||+||++|+++|++||++++      .++++.||+|+|||+|||+|++++.+       ++++||.++|.++.+
T Consensus         1 ILsLDGGG~RGl~~i~vL~~le~~~g------~~i~~~fD~i~GTStGgiIA~~la~g-------~s~~e~~~~y~~~~~   67 (312)
T cd07212           1 LLCLDGGGIRGLVLIQMLIAIEKALG------RPIRELFDWIAGTSTGGILALALLHG-------KSLREARRLYLRMKD   67 (312)
T ss_pred             CEEECCcHHHHHHHHHHHHHHHHHhC------CCchhhccEEEeeChHHHHHHHHHcC-------CCHHHHHHHHHHhhh
Confidence            69999999999999999999999854      47889999999999999999999986       689999999999988


Q ss_pred             cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCC-CccccCCceEEEeeeCCCC---CeEEeeCCCccc
Q 030813           94 KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDV-TVKETLTNVVIPTFDIKLL---QPVIFSTTDVCF  168 (171)
Q Consensus        94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~-~l~d~~~~~~i~a~di~~~---~~~~f~~~~~~~  168 (171)
                      ++|...                   +.|++++|+++|+++||+. ++.|...+.++++++..++   ++++|+||+.+.
T Consensus        68 ~iF~~~-------------------~~y~~~~le~~L~~~~g~~~~l~d~~~p~~~v~~~~~~~~~~~~~~f~ny~~~~  127 (312)
T cd07212          68 RVFDGS-------------------RPYNSEPLEEFLKREFGEDTKMTDVKYPRLMVTGVLADRQPVQLHLFRNYDPPE  127 (312)
T ss_pred             hhCCCC-------------------CCCCChHHHHHHHHHHCcCccccccCCCeEEEEeEeccCCCcCceeeecCCCCC
Confidence            887542                   4589999999999999997 7999988766666666544   559999998653

PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.

>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase

Probab=99.95  E-value=1.4e-27  Score=193.79  Aligned_cols=131  Identities=28%  Similarity=0.508  Sum_probs=112.1

Q ss_pred             ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813           11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE   90 (171)
Q Consensus        11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~   90 (171)
                      ++|||||||||+||++++++|++||++.+       ++.+.||+|+|||+|||+|++++.+       ++++|+.++|.+
T Consensus         1 ~~riLsLdGGG~RGi~~~~vL~~Le~~~~-------~~~~~fD~i~GTSaGaiia~~la~g-------~~~~e~~~~~~~   66 (288)
T cd07213           1 KYRILSLDGGGVKGIVQLVLLKRLAEEFP-------SFLDQIDLFAGTSAGSLIALGLALG-------YSPRQVLKLYEE   66 (288)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHHHHhCc-------ccccceeEEEEeCHHHHHHHHHHcC-------cCHHHHHHHHHH
Confidence            57999999999999999999999999832       5678999999999999999999987       489999999999


Q ss_pred             hCCcccCCCcccchhhHHHhhhhhhccCCCCChH-HHHHHHHHHhCCCCccccCCceEEEeeeCCCCC--------eEEe
Q 030813           91 HGPKIFPQISRSNFSESIASSIDKRLLGPKYDGK-YLRALVNELLGDVTVKETLTNVVIPTFDIKLLQ--------PVIF  161 (171)
Q Consensus        91 ~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~-~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~--------~~~f  161 (171)
                      ...++|......           ..+....|..+ .++++++++|++.+|.|+.++++|+|+|+++++        +++|
T Consensus        67 ~~~~iF~~~~~~-----------~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~~~~~~~~~~~~~~~~~~f  135 (288)
T cd07213          67 VGLKVFSKSSAG-----------GGAGNNQYFAAGFLKAFAEVFFGDLTLGDLKRKVLVPSFQLDSGKDDPNRRWKPKLF  135 (288)
T ss_pred             hCccccCCCccc-----------cccccccCCchHHHHHHHHHHhCcCCHhhcCCCEEEEEEeccCCCCCccccccceEe
Confidence            999999775421           01123445444 899999999999999999999999999999986        6999


Q ss_pred             eCCCc
Q 030813          162 STTDV  166 (171)
Q Consensus       162 ~~~~~  166 (171)
                      +|++.
T Consensus       136 ~n~~~  140 (288)
T cd07213         136 HNFPG  140 (288)
T ss_pred             ecCCC
Confidence            99864

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]

Probab=99.93  E-value=8.8e-27  Score=195.99  Aligned_cols=147  Identities=24%  Similarity=0.394  Sum_probs=121.4

Q ss_pred             CCCCCCCCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHH
Q 030813            3 TAGSAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAK   82 (171)
Q Consensus         3 ~~~~~~~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~   82 (171)
                      ...|+.++++|||++||||+||++.+.+|+.+|+..+      .|+++.||+|||+|+|||+|++|....      |+.+
T Consensus       408 ~~~~vkg~G~rILSiDGGGtrG~~~lqiL~kieklsg------KpIheLFD~ICGvSTG~ilA~~Lg~k~------m~l~  475 (763)
T KOG4231|consen  408 KGRQVKGQGLRILSIDGGGTRGLATLQILKKIEKLSG------KPIHELFDLICGVSTGGILAIALGVKL------MTLE  475 (763)
T ss_pred             cccccCCCceEEEEecCCCccchhHHHHHHHHHHhcC------CcHHHHHHHHhccCchHHHHHHHHhcC------ccHH
Confidence            4578899999999999999999999999999999643      489999999999999999999999765      8999


Q ss_pred             HHHHHHHhhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCC-ccccC-----CceEEEeeeCC--
Q 030813           83 DINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVT-VKETL-----TNVVIPTFDIK--  154 (171)
Q Consensus        83 ~~~~~~~~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~-l~d~~-----~~~~i~a~di~--  154 (171)
                      ||.++|.++++.+|+++..  -     .+....|.+++|++..++++|++.+|++- |-...     .+++++++=++  
T Consensus       476 eCeEiY~~lgk~vFsq~v~--~-----g~~~~sw~Hs~y~~n~we~iLKem~ged~~mi~tsr~~~~PkvavVStiVn~~  548 (763)
T KOG4231|consen  476 ECEEIYKNLGKLVFSQSVP--K-----GNEAASWIHSKYSANEWERILKEMCGEDGDMIITSRVKNVPKVAVVSTIVNVM  548 (763)
T ss_pred             HHHHHHHHHhHHHhhcccc--c-----cchhheehhhhcchHHHHHHHHHHhhhhhhHHHhhccCCCCceeehhhhhhcC
Confidence            9999999999999998752  1     22223556799999999999999999753 43321     25777666444  


Q ss_pred             -CCCeEEeeCCCccc
Q 030813          155 -LLQPVIFSTTDVCF  168 (171)
Q Consensus       155 -~~~~~~f~~~~~~~  168 (171)
                       |.||++|+||+...
T Consensus       549 pT~qpfIFRNY~hp~  563 (763)
T KOG4231|consen  549 PTAQPFIFRNYQHPV  563 (763)
T ss_pred             CCccceeeeccCCCC
Confidence             68999999999764

>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1

Probab=99.92  E-value=2.9e-24  Score=162.27  Aligned_cols=122  Identities=22%  Similarity=0.301  Sum_probs=101.9

Q ss_pred             EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813           14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP   93 (171)
Q Consensus        14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~   93 (171)
                      .|+|+|||+||++|+|+|++|+|+         .  ..||+|+|||+||++|++++.+       ++++++.+.|.+...
T Consensus         2 ~Lvl~GGG~rG~~~~Gvl~~L~~~---------~--~~~d~i~GtSaGal~a~~~a~g-------~~~~~~~~~~~~~~~   63 (175)
T cd07205           2 GLALSGGGARGLAHIGVLKALEEA---------G--IPIDIVSGTSAGAIVGALYAAG-------YSPEEIEERAKLRST   63 (175)
T ss_pred             eEEEeChhHHHHHHHHHHHHHHHc---------C--CCeeEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHhhcc
Confidence            699999999999999999999986         1  2599999999999999999987       478999998876544


Q ss_pred             cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813           94 KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD  165 (171)
Q Consensus        94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~  165 (171)
                      ..+....  .          .....+.|+.+.+++.+++.++..+++++.+++.|+|+|++++++++|++.+
T Consensus        64 ~~~~~~~--~----------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~a~~l~~g~~~~f~~~~  123 (175)
T cd07205          64 DLKALSD--L----------TIPTAGLLRGDKFLELLDEYFGDRDIEDLWIPFFIVATDLTSGKLVVFRSGS  123 (175)
T ss_pred             chhhhhc--c----------ccccccccChHHHHHHHHHHcCCCcHHHCCCCEEEEEEECCCCCEEEEcCCC
Confidence            4332211  0          0113467999999999999999999999999999999999999999998754

Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc

>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2

Probab=99.91  E-value=5.2e-24  Score=162.95  Aligned_cols=129  Identities=26%  Similarity=0.305  Sum_probs=101.4

Q ss_pred             EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCCc
Q 030813           15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPK   94 (171)
Q Consensus        15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (171)
                      |+|+|||+||++|+|+|++|+|+     |      ..||+|+|||+||++|++++.+       ++.+++.++|.....+
T Consensus         2 Lvl~GGG~rG~~~~Gvl~~L~e~-----~------~~~d~i~GtSaGai~aa~~a~g-------~~~~~~~~~~~~~~~~   63 (194)
T cd07207           2 LVFEGGGAKGIAYIGALKALEEA-----G------ILKKRVAGTSAGAITAALLALG-------YSAADIKDILKETDFA   63 (194)
T ss_pred             eEEcCchHHHHHHHHHHHHHHHc-----C------CCcceEEEECHHHHHHHHHHcC-------CCHHHHHHHHHhCCHH
Confidence            89999999999999999999996     1      2479999999999999999987       4789999999887655


Q ss_pred             ccCCCcccchhhHHHhhhhhhc-cCCCCChHHHHHHHHHHhCCCCc------------cccCCceEEEeeeCCCCCeEEe
Q 030813           95 IFPQISRSNFSESIASSIDKRL-LGPKYDGKYLRALVNELLGDVTV------------KETLTNVVIPTFDIKLLQPVIF  161 (171)
Q Consensus        95 if~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~~l~~~~~~~~l------------~d~~~~~~i~a~di~~~~~~~f  161 (171)
                      .|.......+     ..+.+.+ ..+.|+.+.+++.|++.++...+            .+..+++.|+|||+.++++++|
T Consensus        64 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~I~atd~~tg~~~~f  138 (194)
T cd07207          64 KLLDSPVGLL-----FLLPSLFKEGGLYKGDALEEWLRELLKEKTGNSFATSLLRDLDDDLGKDLKVVATDLTTGALVVF  138 (194)
T ss_pred             HHhccchhhh-----HHHHHHHhhcCCccHHHHHHHHHHHHHhccCCcccchhhhhhccccCCcEEEEEEECCCCCEEEe
Confidence            4433211011     1111111 35689999999999999977655            5678899999999999999999


Q ss_pred             eCCCc
Q 030813          162 STTDV  166 (171)
Q Consensus       162 ~~~~~  166 (171)
                      ++...
T Consensus       139 ~~~~~  143 (194)
T cd07207         139 SAETT  143 (194)
T ss_pred             cCCCC
Confidence            87543

ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona

>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6

Probab=99.90  E-value=1.5e-23  Score=158.60  Aligned_cols=121  Identities=21%  Similarity=0.258  Sum_probs=94.3

Q ss_pred             EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhC-
Q 030813           14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHG-   92 (171)
Q Consensus        14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~-   92 (171)
                      .|+|+|||+||++|+|+|++|+|+     |      ..||+|+|||+|||+|++++.+.       +.+++..+ .+.. 
T Consensus         2 ~LvL~GGG~rG~~~~Gvl~~L~e~-----g------~~~d~i~GtSaGAi~aa~~a~g~-------~~~~~~~~-~~~~~   62 (175)
T cd07228           2 GLALGSGGARGWAHIGVLRALEEE-----G------IEIDIIAGSSIGALVGALYAAGH-------LDALEEWV-RSLSQ   62 (175)
T ss_pred             EEEecCcHHHHHHHHHHHHHHHHC-----C------CCeeEEEEeCHHHHHHHHHHcCC-------CHHHHHHH-HhhhH
Confidence            699999999999999999999986     2      25999999999999999999884       44554332 2111 


Q ss_pred             CcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813           93 PKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD  165 (171)
Q Consensus        93 ~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~  165 (171)
                      .+.+.     .+      . ......+.++.+++++.|++.+++.+++++.+++.|+|||++++++++|++.+
T Consensus        63 ~~~~~-----~~------~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~~~  123 (175)
T cd07228          63 RDVLR-----LL------D-LSASRSGLLKGEKVLEYLREIMGGVTIEELPIPFAAVATDLQTGKEVWFREGS  123 (175)
T ss_pred             HHHHh-----hc------c-cCCCcccccCHHHHHHHHHHHcCCCCHHHCCCCEEEEEEECCCCCEEEECCCC
Confidence            11110     00      0 00113467899999999999999999999999999999999999999998754

Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.

>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes

Probab=99.90  E-value=2.7e-23  Score=162.85  Aligned_cols=122  Identities=23%  Similarity=0.264  Sum_probs=101.3

Q ss_pred             EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813           14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP   93 (171)
Q Consensus        14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~   93 (171)
                      .|+|+|||+||++|+|||++|+|+     |      ..+|.|+|||+|||+|++++.+       ++.+|+.+.|.+...
T Consensus         2 ~LvL~GGG~rG~~~~GvL~aL~e~-----g------i~~~~i~GtSaGAi~aa~~a~g-------~~~~~~~~~~~~~~~   63 (221)
T cd07210           2 ALVLSSGFFGFYAHLGFLAALLEM-----G------LEPSAISGTSAGALVGGLFASG-------ISPDEMAELLLSLER   63 (221)
T ss_pred             eEEEcChHHHHHHHHHHHHHHHHc-----C------CCceEEEEeCHHHHHHHHHHcC-------CCHHHHHHHHHhcCH
Confidence            699999999999999999999996     2      2589999999999999999987       478999888876542


Q ss_pred             cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813           94 KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD  165 (171)
Q Consensus        94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~  165 (171)
                      +.|-..    .        ......+.|+.+.+++.+++.++..++.++.+++.|+|||+.++++++|++++
T Consensus        64 ~~~~~~----~--------~~~~~~g~~~~~~l~~~l~~~l~~~~~~~~~~~l~i~atdl~tg~~~~f~~~~  123 (221)
T cd07210          64 KDFWMF----W--------DPPLRGGLLSGDRFAALLREHLPPDRFEELRIPLAVSVVDLTSRETLLLSEGD  123 (221)
T ss_pred             HHHhhh----c--------cccCCccccChHHHHHHHHHHcCCCCHHHCCCCeEEEEEECCCCCEEEECCCC
Confidence            211000    0        01123568999999999999999999999999999999999999999998865

Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.

>COG3621 Patatin [General function prediction only]

Probab=99.89  E-value=5.4e-23  Score=165.52  Aligned_cols=140  Identities=29%  Similarity=0.564  Sum_probs=113.2

Q ss_pred             CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813           10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL   89 (171)
Q Consensus        10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~   89 (171)
                      .++|+|+|||||+||..++.+++.+||..    |  .++++.||+++|||+|||+++.|+.+.       +++|..++|.
T Consensus         7 sk~rIlsldGGGvrG~i~lE~lr~ieqiq----G--kkl~e~FDl~~GTSiGgilal~La~~k-------s~~e~~qlF~   73 (394)
T COG3621           7 SKYRILSLDGGGVRGAILLEKLRIIEQIQ----G--KKLCEYFDLIGGTSIGGILALGLALGK-------SPRELKQLFS   73 (394)
T ss_pred             cceeEEEecCCccccHHHHHHHHHHHHHh----C--CcceeeEeeecCccHHHHHHHHHhcCC-------CCchHHHHHH
Confidence            36899999999999999999999999842    3  488999999999999999999999985       6788888888


Q ss_pred             hhCCcccCCCcc-cchh-hHHHhhhhh-hccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCC-eEEeeC
Q 030813           90 EHGPKIFPQISR-SNFS-ESIASSIDK-RLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQ-PVIFST  163 (171)
Q Consensus        90 ~~~~~if~~~~~-~~~~-~~~~~~~~~-~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~-~~~f~~  163 (171)
                      +...++|..... ..+. ..+ ...+. .++.++|++++|.++|+.++++.++.|+.++++|+.+|+.+.| +.+|.+
T Consensus        74 ~q~~q~f~ee~~~~~fpv~tF-rq~l~~a~~~pkys~~pLiK~lk~~~~D~tlkDL~~~Vvv~~~~l~~~knp~~t~~  150 (394)
T COG3621          74 AQQAQIFPEEMKHRIFPVGTF-RQLLSYALFSPKYSPQPLIKLLKFVCKDYTLKDLIGRVVVPGYDLNNQKNPLFTFS  150 (394)
T ss_pred             HhhhhhccHhhccCCCcchhH-hhhhhhhhcCCcCCchhHHHHHHHhccccchhhhccceEEEeeecccccCCceeec
Confidence            877777766532 1110 001 11111 2578999999999999999999999999999999999999988 666554

>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7

Probab=99.89  E-value=5.7e-23  Score=167.93  Aligned_cols=127  Identities=17%  Similarity=0.236  Sum_probs=101.4

Q ss_pred             ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813           11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE   90 (171)
Q Consensus        11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~   90 (171)
                      +...|+|+|||+||++|+|||++|||+         .  ..||+|+|||+||++|++++.+       ++++++.+...+
T Consensus        14 ~~~gLvL~GGG~RG~ahiGvL~aLee~---------g--i~~d~v~GtSaGAi~ga~ya~g-------~~~~~~~~~~~~   75 (306)
T cd07225          14 NSIALVLGGGGARGCAHIGVIKALEEA---------G--IPVDMVGGTSIGAFIGALYAEE-------RNISRMKQRARE   75 (306)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHHHHc---------C--CCCCEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHH
Confidence            347899999999999999999999997         2  2599999999999999999988       367777665554


Q ss_pred             hCCcccCCCcccchhhHHHhhhh--hhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813           91 HGPKIFPQISRSNFSESIASSID--KRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD  165 (171)
Q Consensus        91 ~~~~if~~~~~~~~~~~~~~~~~--~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~  165 (171)
                      ....     ...++     ..++  .....+.|+.+.+++.|++.|++.+|+|+++|+.++|||+.+|++++|++.+
T Consensus        76 ~~~~-----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~edl~~p~~~vatdl~tg~~~~~~~g~  142 (306)
T cd07225          76 WAKD-----MTSIW-----KKLLDLTYPITSMFSGAAFNRSIHSIFGDKQIEDLWLPYFTITTDITASAMRVHTDGS  142 (306)
T ss_pred             HHHH-----hHHHH-----HHHhcccccccccCChHHHHHHHHHHhCCCCHHHcCCCeEEEeeecCCCCEEEecCCC
Confidence            3211     00011     1111  1234567999999999999999999999999999999999999999998764

Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE

>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17

Probab=99.88  E-value=1.4e-22  Score=161.95  Aligned_cols=97  Identities=47%  Similarity=0.803  Sum_probs=84.4

Q ss_pred             EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813           14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP   93 (171)
Q Consensus        14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~   93 (171)
                      +|||||||+||++++++|++||++++.    +.++.+.||+|+|||+|||+|++++.+.      ++++|+.++|.+...
T Consensus         1 iLsldGGG~rG~~~~~~L~~le~~~~~----~~~~~~~fd~i~GtS~G~iia~~l~~~~------~~~~~~~~~~~~~~~   70 (258)
T cd07199           1 ILSLDGGGIRGIIPAEILAELEKRLGK----PSRIADLFDLIAGTSTGGIIALGLALGR------YSAEELVELYEELGR   70 (258)
T ss_pred             CEEECCchHhHHHHHHHHHHHHHHhCC----CCchhhccceeeeccHHHHHHHHHhcCC------CCHHHHHHHHHHHhH
Confidence            699999999999999999999999752    1138899999999999999999999873      689999999988654


Q ss_pred             cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCcc
Q 030813           94 KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC  167 (171)
Q Consensus        94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~  167 (171)
                      ++|                         .                      +++|+|+|++++++++|+||+..
T Consensus        71 ~if-------------------------~----------------------~~~i~a~~~~~~~~~~f~~~~~~   97 (258)
T cd07199          71 KIF-------------------------P----------------------RVLVTAYDLSTGKPVVFSNYDAE   97 (258)
T ss_pred             hhc-------------------------c----------------------CeEEEEEEcCCCCeEEEECCCCc
Confidence            322                         1                      89999999999999999999865

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>PRK10279 hypothetical protein; Provisional

Probab=99.86  E-value=2.3e-21  Score=157.95  Aligned_cols=126  Identities=15%  Similarity=0.171  Sum_probs=97.7

Q ss_pred             CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813           10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL   89 (171)
Q Consensus        10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~   89 (171)
                      ++...|+|+|||+||++|+|||++|+|+         .  ..||+|+|||+||++|++++.+.        ..++.+++.
T Consensus         3 ~~~igLvL~GGGarG~ahiGVL~aL~E~---------g--i~~d~i~GtS~GAlvga~yA~g~--------~~~l~~~~~   63 (300)
T PRK10279          3 KIKIGLALGSGAARGWSHIGVINALKKV---------G--IEIDIVAGCSIGSLVGAAYACDR--------LSALEDWVT   63 (300)
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHHHHHc---------C--CCcCEEEEEcHHHHHHHHHHcCC--------hHHHHHHHh
Confidence            3457899999999999999999999997         2  25899999999999999999874        345555443


Q ss_pred             hhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813           90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD  165 (171)
Q Consensus        90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~  165 (171)
                      ...   |..    .+ ..  .. +.....+.++.+++++.+++.++..+++++..++.|+|||+.++++++|++.+
T Consensus        64 ~~~---~~~----~~-~~--~d-~~~~~~gl~~~~~~~~~l~~~~~~~~~e~l~~~~~ivAtdl~tg~~v~~~~g~  128 (300)
T PRK10279         64 SFS---YWD----VL-RL--MD-LSWQRGGLLRGERVFNQYREIMPETEIENCSRRFGAVATNLSTGRELWFTEGD  128 (300)
T ss_pred             ccc---hhh----hh-hh--hc-cCCCcCcccCcHHHHHHHHHHcChhhHHhCCCCEEEEEEECCCCCEEEecCCC
Confidence            321   000    00 00  00 01112467899999999999999999999999999999999999999998754

>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6

Probab=99.86  E-value=3.1e-21  Score=155.00  Aligned_cols=129  Identities=19%  Similarity=0.200  Sum_probs=95.0

Q ss_pred             ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813           11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE   90 (171)
Q Consensus        11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~   90 (171)
                      +...|+|+|||+||++|+|||++|||+     |      ..||+|+|||+||++|++++.+       +++.++.+...+
T Consensus         9 ~~igLVL~GGGaRG~ahiGVL~aLeE~-----g------i~~d~v~GtSaGAiiga~ya~g-------~~~~~~~~r~~~   70 (269)
T cd07227           9 QAIGLVLGGGGARGISHIGILQALEEA-----G------IPIDAIGGTSIGSFVGGLYARE-------ADLVPIFGRAKK   70 (269)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHHHHHc-----C------CCccEEEEECHHHHHHHHHHcC-------CchHHHHHHHHH
Confidence            347899999999999999999999997     2      2599999999999999999987       356665543322


Q ss_pred             hCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813           91 HGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD  165 (171)
Q Consensus        91 ~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~  165 (171)
                      ...+.++     ++ +.+ .. ......+.++.+.+.+.|.+.|++.+++|+..|+.+++||+.++++++|++.+
T Consensus        71 ~~~~~~~-----~~-~~l-~d-~~~p~~~~~~g~~~~~~l~~~~~~~~iedl~~pf~~~aTdl~tg~~~~~~~g~  137 (269)
T cd07227          71 FAGRMAS-----MW-RFL-SD-VTYPFASYTTGHEFNRGIWKTFGNTHIEDFWIPFYANSTNITHSRMEIHSSGY  137 (269)
T ss_pred             HHHHHhH-----HH-HHH-hh-cccccccccchhHHHHHHHHHcCcCCHHHCCCCEEEEEEECCCCCEEEecCCC
Confidence            2111110     11 000 00 01112234566777788899999999999999999999999999999998765

These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.

>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli

Probab=99.82  E-value=5.9e-20  Score=143.31  Aligned_cols=107  Identities=24%  Similarity=0.387  Sum_probs=87.2

Q ss_pred             EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCCc
Q 030813           15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPK   94 (171)
Q Consensus        15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (171)
                      |+|+|||+||+||+|+|++|+|+     |      ..||+|+|||+||++|++++.+...     ..+++.++|.++...
T Consensus         1 LvL~GGG~rG~~~~Gvl~aL~e~-----g------~~~d~i~GtS~GAl~aa~~a~~~~~-----~~~~l~~~~~~~~~~   64 (215)
T cd07209           1 LVLSGGGALGAYQAGVLKALAEA-----G------IEPDIISGTSIGAINGALIAGGDPE-----AVERLEKLWRELSRE   64 (215)
T ss_pred             CEecccHHHHHHHHHHHHHHHHc-----C------CCCCEEEEECHHHHHHHHHHcCCcH-----HHHHHHHHHHhCChh
Confidence            78999999999999999999997     2      2699999999999999999998410     278888888865321


Q ss_pred             ccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCC---ceEEEeeeCCCCCeEEeeCCC
Q 030813           95 IFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLT---NVVIPTFDIKLLQPVIFSTTD  165 (171)
Q Consensus        95 if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~---~~~i~a~di~~~~~~~f~~~~  165 (171)
                                      .++            +++++++.++..++.+...   ++.|++||+.++++++|++.+
T Consensus        65 ----------------~~~------------l~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~~~  110 (215)
T cd07209          65 ----------------DVF------------LRGLLDRALDFDTLRLLAILFAGLVIVAVNVLTGEPVYFDDIP  110 (215)
T ss_pred             ----------------hHH------------HHHHHHHhCCHHHHhhccccCceEEEEEEEcCCCCEEEEeCCC
Confidence                            000            6677777777777777765   599999999999999999876

Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.

>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2

Probab=99.82  E-value=1.1e-19  Score=144.40  Aligned_cols=125  Identities=17%  Similarity=0.164  Sum_probs=98.5

Q ss_pred             EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813           14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP   93 (171)
Q Consensus        14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~   93 (171)
                      .|||+|||+||+||+||+++|+|+         .+...+|.|+|||+||++|++++.+.       +++++.+.+.++..
T Consensus         2 ~LsfsGGG~rG~yh~GVl~aL~e~---------g~~~~~d~i~GtSAGAl~aa~~a~g~-------~~~~~~~~~~~~~~   65 (245)
T cd07218           2 NLSFAGCGFLGIYHVGVAVCLKKY---------APHLLLNKISGASAGALAACCLLCDL-------PLGEMTSDFLRVVR   65 (245)
T ss_pred             cEEEeCcHHHHHHHHHHHHHHHHh---------CcccCCCeEEEEcHHHHHHHHHHhCC-------cHHHHHHHHHHHHH
Confidence            599999999999999999999997         22235799999999999999999984       56777766655543


Q ss_pred             cccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813           94 KIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF  168 (171)
Q Consensus        94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~  168 (171)
                      +.....    +         .. +.+.|+ .+.+++.+++.+++....+...++.|++|++.+++.++|++++.+.
T Consensus        66 ~~~~~~----l---------g~-~~p~~~l~~~l~~~l~~~lp~d~~~~~~~~L~i~~T~l~~g~~~~~s~f~s~~  127 (245)
T cd07218          66 EARRHS----L---------GP-FSPSFNIQTCLLEGLQKFLPDDAHERVSGRLHISLTRVSDGKNVIVSEFESRE  127 (245)
T ss_pred             HHHHhc----c---------cC-CccccCHHHHHHHHHHHHCCcchHHhCCCCEEEEEEECCCCCeEEEecCCCcc
Confidence            321111    1         11 124555 6788899999999988888899999999999999999999887654

Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.

>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli

Probab=99.82  E-value=3.4e-20  Score=148.70  Aligned_cols=122  Identities=19%  Similarity=0.280  Sum_probs=90.1

Q ss_pred             EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhC-C
Q 030813           15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHG-P   93 (171)
Q Consensus        15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~-~   93 (171)
                      |+|+|||+||++|+|||++|+|+         .+. .||+|+|||+||++|++++.+.       +.+ ..+.|.+.. +
T Consensus         1 Lvl~GGG~rG~~~~Gvl~al~e~---------~~~-~fd~i~GtSaGAi~a~~~~~g~-------~~~-~~~~~~~~~~~   62 (266)
T cd07208           1 LVLEGGGMRGAYTAGVLDAFLEA---------GIR-PFDLVIGVSAGALNAASYLSGQ-------RGR-ALRINTKYATD   62 (266)
T ss_pred             CeeccchhhHHHHHHHHHHHHHc---------CCC-CCCEEEEECHHHHhHHHHHhCC-------cch-HHHHHHHhcCC
Confidence            79999999999999999999997         221 5999999999999999999885       222 234444332 1


Q ss_pred             cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHH---HHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCc
Q 030813           94 KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALV---NELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDV  166 (171)
Q Consensus        94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l---~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~  166 (171)
                      ..|..     +     .++++  .++.|+.+.+.+.+   ...|+..++.++..++.|+|||++++++++|++.+.
T Consensus        63 ~~~~~-----~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~~g~~~~~~~~~~  126 (266)
T cd07208          63 PRYLG-----L-----RSLLR--TGNLFDLDFLYDELPDGLDPFDFEAFAASPARFYVVATDADTGEAVYFDKPDI  126 (266)
T ss_pred             CCccC-----H-----HHHhc--CCCeecHHHHHhhccCccCCcCHHHHHhCCCcEEEEEEECCCCCEEEEeCcCc
Confidence            11110     1     11111  24567888887766   455667788899999999999999999999998774

Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.

>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family

Probab=99.81  E-value=2.3e-19  Score=142.45  Aligned_cols=126  Identities=21%  Similarity=0.229  Sum_probs=95.7

Q ss_pred             EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCCc
Q 030813           15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPK   94 (171)
Q Consensus        15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (171)
                      |||+|||+||+||+||+++|+|+     |  +.+...+|.|+|||+||++|++++.+.       +++++.+.+.+...+
T Consensus         2 LslsGGG~~G~yh~GVl~~L~e~-----g--~~l~~~~~~i~GtSAGAl~aa~~a~g~-------~~~~~~~~~~~~~~~   67 (243)
T cd07204           2 LSFSGCGFLGIYHVGVASALREH-----A--PRLLQNARRIAGASAGAIVAAVVLCGV-------SMEEACSFILKVVSE   67 (243)
T ss_pred             eeEcchHHHHHHHHHHHHHHHHc-----C--cccccCCCEEEEEcHHHHHHHHHHhCC-------CHHHHHHHHHHHHhh
Confidence            89999999999999999999997     2  222233679999999999999999984       678877666655433


Q ss_pred             ccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813           95 IFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF  168 (171)
Q Consensus        95 if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~  168 (171)
                      ...... +.             ..+.|+ .+.+++.+++.+++.....+..++.|++||+.++++++|++++.+.
T Consensus        68 ~~~~~~-g~-------------~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~~g~~~~~~~f~s~~  128 (243)
T cd07204          68 ARRRSL-GP-------------LHPSFNLLKILRQGLEKILPDDAHELASGRLHISLTRVSDGENVLVSEFDSKE  128 (243)
T ss_pred             hhhhhc-Cc-------------ccccchHHHHHHHHHHHHCChhHHHhcCCCEEEEEEECCCCCEEEEecCCCch
Confidence            211110 00             112333 3568888999999888888889999999999999999999877654

Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.

>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4

Probab=99.81  E-value=1.2e-19  Score=144.28  Aligned_cols=128  Identities=19%  Similarity=0.193  Sum_probs=92.8

Q ss_pred             EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813           14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP   93 (171)
Q Consensus        14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~   93 (171)
                      .|||+|||+||+||+||+++|+|+     |  +++.+.||.|+|||+||++|++++.+.      ...+++.+++..+.+
T Consensus         1 ~L~l~GGG~rG~yhiGVl~~L~e~-----g--~~l~~~~~~i~GtSaGAl~aa~~a~~~------~~~~~~~~~~~~~~~   67 (246)
T cd07222           1 NLSFAACGFLGIYHLGAAKALLRH-----G--KKLLKRVKRFAGASAGSLVAAVLLTAP------EKIEECKEFTYKFAE   67 (246)
T ss_pred             CeeEcccHHHHHHHHHHHHHHHHc-----C--chhhccCCEEEEECHHHHHHHHHhcCh------HHHHHHHHHHHHHHH
Confidence            389999999999999999999997     2  244567999999999999999998542      135666655544332


Q ss_pred             cccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813           94 KIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF  168 (171)
Q Consensus        94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~  168 (171)
                      .+.....             .. ..+.|+ .+.|++.+++.++.........++.|++||+.+++.++|++++.+.
T Consensus        68 ~~~~~~~-------------~~-~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~aTdl~tg~~v~~~~f~s~~  129 (246)
T cd07222          68 EVRKQRF-------------GA-MTPGYDFMARLRKGIESILPTDAHELANDRLHVSITNLKTRKNYLVSNFTSRE  129 (246)
T ss_pred             HHHhccc-------------CC-CCCcchHHHHHHHHHHHHCCHHHHhcCCCcEEEEEEECCCCCeEEEeccCCcc
Confidence            2221110             01 122333 6778999999998754433458999999999999999999876554

PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.

>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3

Probab=99.80  E-value=6.2e-19  Score=140.60  Aligned_cols=127  Identities=17%  Similarity=0.145  Sum_probs=96.9

Q ss_pred             EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813           14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP   93 (171)
Q Consensus        14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~   93 (171)
                      .|||+|||+||+||+||+++|+|+.       +++...||.|+|||+||++|+.++.+.       +++++.+.+.++.+
T Consensus         2 ~Lsl~GGG~rG~yh~GVl~aL~e~~-------~~l~~~~~~i~GtSAGAl~aa~~asg~-------~~~~~~~~~~~~~~   67 (252)
T cd07221           2 SLSFAGCGFLGFYHVGVTRCLSERA-------PHLLRDARMFFGASAGALHCVTFLSGL-------PLDQILQILMDLVR   67 (252)
T ss_pred             EEEEeCcHHHHHHHHHHHHHHHHhC-------cchhccCCEEEEEcHHHHHHHHHHhCC-------CHHHHHHHHHHHHH
Confidence            5999999999999999999999972       234456999999999999999999884       57788887776643


Q ss_pred             cccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813           94 KIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF  168 (171)
Q Consensus        94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~  168 (171)
                      ..-.+.    +          .+.++.|+ .+.+++.+++.++.........++.|++||+.+++.++|++++.+.
T Consensus        68 ~~~~~~----~----------g~~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~tg~~v~~~~f~s~~  129 (252)
T cd07221          68 SARSRN----I----------GILHPSFNLSKHLRDGLQRHLPDNVHQLISGKMCISLTRVSDGENVLVSDFHSKD  129 (252)
T ss_pred             hccccc----c----------cccCcccCHHHHHHHHHHHHCCcCHHHhcCCCEEEEEEECCCCCEEEEecCCCch
Confidence            211111    0          11223343 5788889999888754444467899999999999999999887654

PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.

>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1

Probab=99.79  E-value=6.5e-19  Score=146.18  Aligned_cols=131  Identities=14%  Similarity=0.166  Sum_probs=100.3

Q ss_pred             CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813           10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL   89 (171)
Q Consensus        10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~   89 (171)
                      +.-..|+|+|||+||+||+||+++|+|+     |  +.+...||.|+|||+||++|++++.+.       +++|+.+++.
T Consensus        10 ~~~~gLvFsGGGfrGiYHvGVl~aL~E~-----g--p~ll~~~d~IaGtSAGALvAAl~asG~-------s~de~~r~~~   75 (382)
T cd07219          10 DTPHSISFSGSGFLSFYQAGVVDALRDL-----A--PRMLETAHRVAGTSAGSVIAALVVCGI-------SMDEYLRVLN   75 (382)
T ss_pred             CCCceEEEcCcHHHHHHHHHHHHHHHhc-----C--CcccccCCeEEEEcHHHHHHHHHHhCC-------CHHHHHHHHH
Confidence            3456899999999999999999999996     2  234567999999999999999999983       6788877765


Q ss_pred             hhCCcccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813           90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF  168 (171)
Q Consensus        90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~  168 (171)
                      ...++. ....   +          .+..+.++ .+.+++.|++.+++..+.+...++.|++||+.+|+.++|++++.+.
T Consensus        76 ~~~~~~-r~~~---l----------G~~~p~~~l~~~lr~~L~~~LP~da~e~~~g~L~IsaTdl~tGknv~fS~F~S~~  141 (382)
T cd07219          76 VGVAEV-RKSF---L----------GPLSPSCKMVQMMRQFLYRVLPEDSYKVATGKLHVSLTRVTDGENVVVSEFTSKE  141 (382)
T ss_pred             HHHHHH-HHhh---c----------cCccccchHHHHHHHHHHhhCcHhhHHhCCCcEEEEEEECCCCCEEEEeccCCcc
Confidence            433221 1110   0          11112222 2677889999999988988999999999999999999999887654

Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.

>cd07198 Patatin Patatin-like phospholipase

Probab=99.79  E-value=6.6e-19  Score=132.79  Aligned_cols=115  Identities=22%  Similarity=0.281  Sum_probs=81.7

Q ss_pred             EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC-
Q 030813           15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP-   93 (171)
Q Consensus        15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~-   93 (171)
                      |+|+|||+||+||+|||++|+|+         .+  .||.|+|||+||++|++++.+.       +.+++..++.++.. 
T Consensus         1 Lvl~GGG~rG~~~~Gvl~aL~e~---------gi--~~d~v~GtSaGAi~aa~~a~g~-------~~~~~~~~~~~~~~~   62 (172)
T cd07198           1 LVLSGGGALGIYHVGVAKALRER---------GP--LIDIIAGTSAGAIVAALLASGR-------DLEEALLLLLRLSRE   62 (172)
T ss_pred             CEECCcHHHHHHHHHHHHHHHHc---------CC--CCCEEEEECHHHHHHHHHHcCC-------CHHHHHHHHHHHHHH
Confidence            78999999999999999999997         22  4999999999999999999984       56666665532211 


Q ss_pred             --cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeC
Q 030813           94 --KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFST  163 (171)
Q Consensus        94 --~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~  163 (171)
                        ..+...    +           .....+....++..+ +.+....+++...++.|++||+.++++++|..
T Consensus        63 ~~~~~~~~----~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~at~l~tg~~~~~~~  118 (172)
T cd07198          63 VRLRFDGA----F-----------PPTGRLLGILRQPLL-SALPDDAHEDASGKLFISLTRLTDGENVLVSD  118 (172)
T ss_pred             HHHhccCC----c-----------CcccchhHHHHHHHH-HhccHhHHHHCCCCEEEEEEECCCCCEEEEeC
Confidence              111110    0           011122222233333 33556778889999999999999999999965

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.

>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]

Probab=99.78  E-value=1.8e-18  Score=141.48  Aligned_cols=135  Identities=24%  Similarity=0.272  Sum_probs=98.8

Q ss_pred             CCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHH
Q 030813            9 GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFY   88 (171)
Q Consensus         9 ~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~   88 (171)
                      .++...|+|.|||+||++|+|||++|+|+     |      ..||+|+|||+||++|++++.+.       +.++...+-
T Consensus         8 ~~~~i~LvL~GGgArG~~hiGVl~aL~e~-----g------i~~~~iaGtS~GAiva~l~A~g~-------~~~~~~~~~   69 (306)
T COG1752           8 AKLRIGLVLGGGGARGAAHIGVLKALEEA-----G------IPIDVIAGTSAGAIVAALYAAGM-------DEDELELAA   69 (306)
T ss_pred             cCceEEEEecCcHHHHHHHHHHHHHHHHc-----C------CCccEEEecCHHHHHHHHHHcCC-------ChhHHHHHH
Confidence            34458999999999999999999999997     2      36999999999999999999984       344444433


Q ss_pred             HhhCCcccC-CCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCC--CccccCCc-eEEEeeeCCCCCeEEeeCC
Q 030813           89 LEHGPKIFP-QISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDV--TVKETLTN-VVIPTFDIKLLQPVIFSTT  164 (171)
Q Consensus        89 ~~~~~~if~-~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~--~l~d~~~~-~~i~a~di~~~~~~~f~~~  164 (171)
                      ..+...... ....... +.   .+......+.++.+.+.+.+++++++.  .+.++..+ +.|+++|+.+++.++|++.
T Consensus        70 ~~l~~~~~~~~~~~~~~-d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~atd~~~g~~~~~~~g  145 (306)
T COG1752          70 QRLTARWDNARDLLRLL-DL---TLPGGRPLGLLRGEKLRNLLRELLGDLLFDFEDLPIPLLYVVATDLLTGREVVFSEG  145 (306)
T ss_pred             HHHHhhhccccchhhcc-ch---hhhccCccceecHHHHHHHHHHHhcccccCHHHcCCCcEEEEeeEcCCCCEEEecCC
Confidence            332211110 0000000 00   000000236889999999999999999  99999999 9999999999999999875


Q ss_pred             C
Q 030813          165 D  165 (171)
Q Consensus       165 ~  165 (171)
                      .
T Consensus       146 ~  146 (306)
T COG1752         146 S  146 (306)
T ss_pred             c
Confidence            4

>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2

Probab=99.78  E-value=1.8e-18  Score=137.70  Aligned_cols=129  Identities=16%  Similarity=0.092  Sum_probs=96.5

Q ss_pred             eEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhh
Q 030813           12 ITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEH   91 (171)
Q Consensus        12 ~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~   91 (171)
                      ...|||+|||+||+||+||+++|+|+     |  +.+.+.+|.|+|+|+||++|+.++.+.       +.+++.+...++
T Consensus         4 ~~~LsfsGGG~rG~yh~GVl~~L~e~-----g--~~l~~~~~~i~G~SAGAl~aa~~a~g~-------~~~~~~~~~~~~   69 (249)
T cd07220           4 GWNISFAGCGFLGVYHVGVASCLLEH-----A--PFLVANARKIYGASAGALTATALVTGV-------CLGECGASVIRV   69 (249)
T ss_pred             CceEEEeChHHHHHHHHHHHHHHHhc-----C--CcccccCCeEEEEcHHHHHHHHHHcCC-------CHHHHHHHHHHH
Confidence            46799999999999999999999997     2  234456999999999999999999984       566655555444


Q ss_pred             CCcccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813           92 GPKIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF  168 (171)
Q Consensus        92 ~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~  168 (171)
                      .++. .+...+.             ..+.|+ .+.+++.+++.+++..+.....++.|++||+.+++.++|+++..+.
T Consensus        70 a~~~-r~~~~g~-------------~~~~~~l~~~l~~~l~~~lp~~a~~~~~~~l~is~T~~~tg~~~~~s~f~s~~  133 (249)
T cd07220          70 AKEA-RKRFLGP-------------LHPSFNLVKILRDGLLRTLPENAHELASGRLGISLTRVSDGENVLVSDFNSKE  133 (249)
T ss_pred             HHHh-hHhhccC-------------ccccchHHHHHHHHHHHHCChhhHHHCCCcEEEEEEECCCCCEEEEecCCCcc
Confidence            3221 0000001             112222 2468888888888888888889999999999999999999887654

PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.

>cd07232 Pat_PLPL Patain-like phospholipase

Probab=99.74  E-value=2e-17  Score=139.89  Aligned_cols=133  Identities=17%  Similarity=0.178  Sum_probs=96.9

Q ss_pred             ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813           11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE   90 (171)
Q Consensus        11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~   90 (171)
                      +..+|+|+|||+||++|+|||++|+|+         .  ..||+|+|||+||++|++++.+        +.+|+.+++..
T Consensus        66 grtALvLsGGG~rG~~h~GVlkaL~e~---------g--llp~iI~GtSAGAivaalla~~--------t~~el~~~~~~  126 (407)
T cd07232          66 GRTALCLSGGAAFAYYHFGVVKALLDA---------D--LLPNVISGTSGGSLVAALLCTR--------TDEELKQLLVP  126 (407)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHHHHhC---------C--CCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHHhh
Confidence            457999999999999999999999997         2  3589999999999999999985        45777777654


Q ss_pred             hCCcccCCCcccchhhHHHhhhhhhc-cCCCCChHHHHHH-HHHHhCCCCcccc----CCceEEEeeeCCCCCeEEeeCC
Q 030813           91 HGPKIFPQISRSNFSESIASSIDKRL-LGPKYDGKYLRAL-VNELLGDVTVKET----LTNVVIPTFDIKLLQPVIFSTT  164 (171)
Q Consensus        91 ~~~~if~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~~-l~~~~~~~~l~d~----~~~~~i~a~di~~~~~~~f~~~  164 (171)
                      .....|......++     ..+.+.+ .+..+|.+.+++. ++..+++.++.+.    .+.+-|++++.+++++..|.||
T Consensus       127 ~~~~~~~~~~~~~~-----~~~~~~l~~G~~~d~~~l~~~~~~~~~gd~TFeEa~~~tgr~l~I~vt~~d~~~~~~lln~  201 (407)
T cd07232         127 ELARKITACEPPWL-----VWIPRWLKTGARFDSVEWARTCCWFTRGSMTFEEAYERTGRILNISVVPADPHSPTILLNY  201 (407)
T ss_pred             hhhhhhhhccchHH-----HHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCHHHHHHhcCCEEEEEEEECCCCCceEEecc
Confidence            32221211111111     1111222 3467999999998 7889999888876    3457788888888888888887


Q ss_pred             Ccc
Q 030813          165 DVC  167 (171)
Q Consensus       165 ~~~  167 (171)
                      ...
T Consensus       202 ~ts  204 (407)
T cd07232         202 LTS  204 (407)
T ss_pred             CCC
Confidence            543

Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.

>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5

Probab=99.73  E-value=3.2e-17  Score=139.18  Aligned_cols=131  Identities=21%  Similarity=0.354  Sum_probs=95.0

Q ss_pred             CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813           10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL   89 (171)
Q Consensus        10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~   89 (171)
                      =+..+|+|+|||+||++|+|||++|+|+         .+  .||+|+|||+||++|++++.+        +.+|+.+++.
T Consensus        71 ~GrtALvLsGGG~rG~~hiGVLkaL~E~---------gl--~p~vIsGTSaGAivAal~as~--------~~eel~~~l~  131 (421)
T cd07230          71 FGRTALLLSGGGTFGMFHIGVLKALFEA---------NL--LPRIISGSSAGSIVAAILCTH--------TDEEIPELLE  131 (421)
T ss_pred             cCCEEEEEcCcHHHHHHHHHHHHHHHHc---------CC--CCCEEEEECHHHHHHHHHHcC--------CHHHHHHHHH
Confidence            3567999999999999999999999987         22  589999999999999999985        4688888777


Q ss_pred             hhCC---cccCCCcccchhhHHHhhhhhhc-cCCCCChHHHHHHHHHHhCCCCcccc----CCceEEEeeeCCCCC-eEE
Q 030813           90 EHGP---KIFPQISRSNFSESIASSIDKRL-LGPKYDGKYLRALVNELLGDVTVKET----LTNVVIPTFDIKLLQ-PVI  160 (171)
Q Consensus        90 ~~~~---~if~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~~l~~~~~~~~l~d~----~~~~~i~a~di~~~~-~~~  160 (171)
                      ....   .+|.....  . ..+...+.+.+ .++.||.+.+++.+++.+++.+|.+.    .+.+.|++++.+.++ |.+
T Consensus       132 ~~~~~~~~~f~~~~~--~-~~~~~~~~~l~~~g~~~d~~~l~~~l~~~lgd~tF~Eay~rt~r~L~I~vt~~~~~~~p~l  208 (421)
T cd07230         132 EFPYGDFNVFEDPDQ--E-ENVLQKLSRFLKYGSWFDISHLTRVMRGFLGDLTFQEAYNRTRRILNITVSPASIYELPRL  208 (421)
T ss_pred             hcchHHHHHHhcccc--c-chHHHHHHHHHhcCCCcCHHHHHHHHHHHhCCCCHHHHHHhhCCeEEEEEEeccccCCCee
Confidence            6432   23433210  0 01102222222 35689999999999999999988775    456778888777765 444


Q ss_pred             ee
Q 030813          161 FS  162 (171)
Q Consensus       161 f~  162 (171)
                      +.
T Consensus       209 ln  210 (421)
T cd07230         209 LN  210 (421)
T ss_pred             ee
Confidence            43

TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.

>cd07224 Pat_like Patatin-like phospholipase

Probab=99.70  E-value=8.2e-17  Score=127.10  Aligned_cols=118  Identities=14%  Similarity=0.123  Sum_probs=90.0

Q ss_pred             EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813           14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP   93 (171)
Q Consensus        14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~   93 (171)
                      .|||+|||.+|+||+|||++|+|+         .+...|+.|+|+|+||++|++++.+.       +.+++.+++.++..
T Consensus         1 glsfsggG~lg~yh~GVl~~L~e~---------gi~~~~~~i~G~SAGAl~aa~~asg~-------~~~~~~~~~~~~~~   64 (233)
T cd07224           1 GFSFSAAGLLFPYHLGVLSLLIEA---------GVINETTPLAGASAGSLAAACSASGL-------SPEEALEATEELAE   64 (233)
T ss_pred             CeeecchHHHHHHHHHHHHHHHHc---------CCCCCCCEEEEEcHHHHHHHHHHcCC-------CHHHHHHHHHHHHH
Confidence            389999999999999999999997         34345899999999999999999984       57778777776653


Q ss_pred             cccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccC-CceEEEeeeCCCCC-eEEeeCCCc
Q 030813           94 KIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETL-TNVVIPTFDIKLLQ-PVIFSTTDV  166 (171)
Q Consensus        94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~-~~~~i~a~di~~~~-~~~f~~~~~  166 (171)
                      +.+...                   ..++ ...+++.+++.++......+. .++.|++|++.+++ .++++.+..
T Consensus        65 ~~~~~~-------------------~~~~~~~~l~~~l~~~lp~d~~e~~~~~~l~i~~T~~~~~~~~~~v~~f~~  121 (233)
T cd07224          65 DCRSNG-------------------TAFRLGGVLRDELDKTLPDDAHERCNRGRIRVAVTQLFPVPRGLLVSSFDS  121 (233)
T ss_pred             HHHhcC-------------------CcccHHHHHHHHHHHHcCcHHHHHhcCCCEEEEEEecccCCCceEEEecCC
Confidence            332111                   1122 356778889989888777777 89999999998763 666655543

Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.

>cd07229 Pat_TGL3_like Triacylglycerol lipase 3

Probab=99.70  E-value=1.5e-16  Score=133.13  Aligned_cols=138  Identities=21%  Similarity=0.243  Sum_probs=98.3

Q ss_pred             ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813           11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE   90 (171)
Q Consensus        11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~   90 (171)
                      +..+|+|+|||++|++|+||+++|+|+         .  -.+|+|+|||+|||+|++++.+        +.+|+.+++..
T Consensus        82 GrtAlvlsGGg~~G~~h~Gv~kaL~e~---------g--l~p~~i~GtS~Gaivaa~~a~~--------~~~e~~~~l~~  142 (391)
T cd07229          82 GRTALVLQGGSIFGLCHLGVVKALWLR---------G--LLPRIITGTATGALIAALVGVH--------TDEELLRFLDG  142 (391)
T ss_pred             CCEEEEecCcHHHHHHHHHHHHHHHHc---------C--CCCceEEEecHHHHHHHHHHcC--------CHHHHHHHHhc
Confidence            467999999999999999999999997         2  3589999999999999999985        46888887764


Q ss_pred             hCCc--ccCC---------CcccchhhHHHhhhhhhc-cCCCCChHHHHHHHHHHhCCCCcccc----CCceEEEeeeCC
Q 030813           91 HGPK--IFPQ---------ISRSNFSESIASSIDKRL-LGPKYDGKYLRALVNELLGDVTVKET----LTNVVIPTFDIK  154 (171)
Q Consensus        91 ~~~~--if~~---------~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~~l~~~~~~~~l~d~----~~~~~i~a~di~  154 (171)
                      ..-.  .|..         ...+++ ..+...+.+.+ .+..+|.+.|++.+++.+|+.+|+|.    .+.+-|++++.+
T Consensus       143 ~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~r~l~~G~l~D~~~l~~~lr~~lgd~TFeEAy~rTgriLnItv~~~~  221 (391)
T cd07229         143 DGIDLSAFNRLRGKKSLGYSGYGWL-GTLGRRIQRLLREGYFLDVKVLEEFVRANLGDLTFEEAYARTGRVLNITVAPSA  221 (391)
T ss_pred             cchhhhhhhhhcccccccccccccc-chHHHHHHHHHcCCCcccHHHHHHHHHHHcCCCcHHHHHHhhCCEEEEEEECCC
Confidence            3211  1111         000011 00101112222 35589999999999999999999886    466778888765


Q ss_pred             -CCCeEEeeCCCccc
Q 030813          155 -LLQPVIFSTTDVCF  168 (171)
Q Consensus       155 -~~~~~~f~~~~~~~  168 (171)
                       .+.|.+++-..+++
T Consensus       222 ~~~~p~LLNylTaPn  236 (391)
T cd07229         222 VSGSPNLLNYLTAPN  236 (391)
T ss_pred             CCCCCeeeecCCCCC
Confidence             56788877655543

Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.

>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5

Probab=99.68  E-value=3.4e-16  Score=129.94  Aligned_cols=131  Identities=15%  Similarity=0.081  Sum_probs=102.2

Q ss_pred             CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813           10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL   89 (171)
Q Consensus        10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~   89 (171)
                      .+...|+|+|||.+|+||+||+++|.|+.+       .+....+-|+|+|+|||+|++++.+.       +++++.+...
T Consensus         7 ~~~~~LsfSGgGflG~yHvGV~~~L~e~~p-------~ll~~~~~iaGaSAGAL~aa~~a~g~-------~~~~~~~~i~   72 (405)
T cd07223           7 EGGWNLSFSGAGYLGLYHVGVTECLRQRAP-------RLLQGARRIYGSSSGALNAVSIVCGK-------SADFCCSNLL   72 (405)
T ss_pred             CCCEEEEEeCcHHHHHHHHHHHHHHHHhCc-------hhhccCCeeeeeCHHHHHHHHHHhCC-------CHHHHHHHHH
Confidence            455789999999999999999999999832       44456788999999999999999984       5675555443


Q ss_pred             hhCCcccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813           90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF  168 (171)
Q Consensus        90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~  168 (171)
                      ++.++.-. .             ..+..++.|+ .+.+++.|++.++++....+..++.|++|++.+++-++.++|..+.
T Consensus        73 ~ia~~~r~-~-------------~lG~~~p~f~l~~~lr~~L~~~LP~daHe~~sgrL~ISlT~l~~gknvlvS~F~Sre  138 (405)
T cd07223          73 GMVKHLER-L-------------SLGIFHPAYAPIEHIRQQLQESLPPNIHILASQRLGISMTRWPDGRNFIVTDFATRD  138 (405)
T ss_pred             HHHHHhhh-h-------------ccCCCCccccHHHHHHHHHHHhCCchhhHHhCCceEEEEEEccCCceEEecCCCCHH
Confidence            33322100 0             0123456666 6789999999999999999999999999999999999998887764

PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.

>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]

Probab=99.63  E-value=2.2e-16  Score=140.24  Aligned_cols=127  Identities=20%  Similarity=0.252  Sum_probs=93.5

Q ss_pred             ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHH-HHHHHHH
Q 030813           11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAK-DINNFYL   89 (171)
Q Consensus        11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~-~~~~~~~   89 (171)
                      .-..|+|.|||+||++|+|||++|||+     |      .++|+|.|||+||++++++|-..+ .   ..+. .+.+++.
T Consensus       838 naIgLVLGGGGARG~ahiGvl~ALeE~-----G------IPvD~VGGTSIGafiGaLYA~e~d-~---~~v~~rak~f~~  902 (1158)
T KOG2968|consen  838 NAIGLVLGGGGARGAAHIGVLQALEEA-----G------IPVDMVGGTSIGAFIGALYAEERD-L---VPVFGRAKKFAG  902 (1158)
T ss_pred             CeEEEEecCcchhhhhHHHHHHHHHHc-----C------CCeeeeccccHHHhhhhhhhccCc-c---hHHHHHHHHHHH
Confidence            357899999999999999999999997     3      358999999999999999995421 0   0111 2222222


Q ss_pred             hhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCC
Q 030813           90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTT  164 (171)
Q Consensus        90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~  164 (171)
                      ++.         ++| ..+ .. +.+...++|+...+..-+.+.||+..++|++.+.++.+||+.+-...+.+|.
T Consensus       903 ~ms---------siw-~~l-lD-LTyP~tsmftGh~FNrsI~~~Fgd~~IEDlWi~yfciTTdIt~S~mriH~~G  965 (1158)
T KOG2968|consen  903 KMS---------SIW-RLL-LD-LTYPITSMFTGHEFNRSIHSTFGDVLIEDLWIPYFCITTDITSSEMRVHRNG  965 (1158)
T ss_pred             HHH---------HHH-HHH-Hh-ccccchhccchhhhhhHHHHHhcccchhhhhheeeecccccchhhhhhhcCC
Confidence            211         122 110 11 1223457899999999999999999999999999999999998877777664

>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase

Probab=99.48  E-value=1.9e-13  Score=111.46  Aligned_cols=59  Identities=22%  Similarity=0.418  Sum_probs=50.6

Q ss_pred             ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHH
Q 030813           11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFY   88 (171)
Q Consensus        11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~   88 (171)
                      +..+|+|+|||++|++|+||+++|+|+         .  -.+|+|+|+|+||++|++++.+        +.+|+.+++
T Consensus        67 G~~aLvlsGGg~~g~~h~GVlkaL~e~---------g--l~p~~i~GsSaGAivaa~~~~~--------t~~El~~~~  125 (323)
T cd07231          67 GRTALLLSGGAALGTFHVGVVRTLVEH---------Q--LLPRVIAGSSVGSIVCAIIATR--------TDEELQSFF  125 (323)
T ss_pred             CCEEEEEcCcHHHHHHHHHHHHHHHHc---------C--CCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHH
Confidence            457999999999999999999999997         2  2589999999999999999974        456766654

Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.

>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2

Probab=99.46  E-value=1.7e-14  Score=107.96  Aligned_cols=113  Identities=22%  Similarity=0.286  Sum_probs=65.3

Q ss_pred             EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCCc
Q 030813           15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPK   94 (171)
Q Consensus        15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (171)
                      |+|+|||+||++++|+|++| +         .+..+.||+|+|||+||++|++++.+....   ...+++.+++......
T Consensus         1 LvlsGGG~rg~~~~G~l~~L-~---------~~~~~~~d~i~GtS~Gal~a~~~~~~~~~~---~~~~~~~~~~~~~~~~   67 (204)
T PF01734_consen    1 LVLSGGGSRGAYQAGVLKAL-G---------QGLGERFDVISGTSAGALNAALLALGYDPD---ESLDQFYDLWRNLFFS   67 (204)
T ss_dssp             EEE---CCGCCCCHHHHHHH-C---------CTGCCT-SEEEEECCHHHHHHHHHTC-TCC---CCCCHHCCHHHHHHHC
T ss_pred             CEEcCcHHHHHHHHHHHHHH-h---------hhhCCCccEEEEcChhhhhHHHHHhCCCHH---HHHHHHHHHHHhhccc
Confidence            89999999999999999998 1         144578999999999999999999884322   2234455555443211


Q ss_pred             cc-CCCcccchhhHHHhhhh-hhccCCCCChHHHHHHHHHHhCCCCccccC
Q 030813           95 IF-PQISRSNFSESIASSID-KRLLGPKYDGKYLRALVNELLGDVTVKETL  143 (171)
Q Consensus        95 if-~~~~~~~~~~~~~~~~~-~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~  143 (171)
                      .. ....  .. ........ .......|+.+.+++.+++.++.....+..
T Consensus        68 ~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  115 (204)
T PF01734_consen   68 SNLMKRR--RP-RKAFRRLRGLFGGSGLFDSEPLRDWLRRVLGDLTLEEFS  115 (204)
T ss_dssp             CCTH---------HHT-------SSS-SS--HHHHHHHHHHHCCHCHHHHC
T ss_pred             ccccccc--cc-ccccccccccccCccchhHHHHHHHHHHhccccCHHHhh
Confidence            11 0000  00 00000111 122456789999999999999887665543

This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.

>TIGR03607 patatin-related protein

Probab=99.42  E-value=2.2e-12  Score=115.46  Aligned_cols=140  Identities=17%  Similarity=0.255  Sum_probs=95.4

Q ss_pred             EEEEEeCCChhhHHHHHHHHHHHHHhhhcC------------------------CCCCCcCCccceeeeCChHHHHHHHh
Q 030813           13 TVLSIDGGGIRGIIPGTILAFLESKLQELD------------------------GPSARIADYFDVVAGTSTGGLVTTML   68 (171)
Q Consensus        13 ~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~------------------------g~~~~i~~~fD~i~GtS~Gaiia~~l   68 (171)
                      ..|+|.|||++++|+.||+++|-+..+.-.                        +........||+|+|||+|||||+++
T Consensus         4 lalVl~GG~slA~y~~GV~~ei~~l~~~~~~~~~~~~~~~~~~~~~Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~l   83 (739)
T TIGR03607         4 LALVMYGGVSLAVYMHGVTKEINRLVRASRAYHGYPDEASAGTEAVYGALLELLGAHLRLRVRVDVISGTSAGGINGVLL   83 (739)
T ss_pred             EEEEecCcHHHHHHHHHHHHHHHHHhhhhcccccccccccccchhHHHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHH
Confidence            369999999999999999999988655310                        00012346899999999999999999


Q ss_pred             hCCCCCCCCccCHHHHHHHHHhhCC--cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCC------Ccc
Q 030813           69 TAPNKEGGPFIAAKDINNFYLEHGP--KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDV------TVK  140 (171)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~--~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~------~l~  140 (171)
                      +.+..   ...+.+++.++|.+..+  +.+..... .+      . +..-..+.|+.+.+++.|.+.++..      ++.
T Consensus        84 A~~~~---~g~~~~~L~~~W~~~~d~~~lLd~~~~-~~------~-~~~~~~sLl~G~~l~~~L~~~L~~~~~~~~~~~~  152 (739)
T TIGR03607        84 AYALA---YGADLDPLRDLWLELADIDALLRPDAK-AW------P-RLRRPGSLLDGEYFLPLLLDALAAMVRAGPAGPS  152 (739)
T ss_pred             Hcccc---cCCCHHHHHHHHHhcccHHhhcChhhh-cc------c-cccCCccccccHHHHHHHHHHHHHhCCCCCCCcc
Confidence            98541   22578999999987643  22222110 00      0 0011235688999999999888643      455


Q ss_pred             ccC-----CceEEEeeeCCCCCeE-EeeCC
Q 030813          141 ETL-----TNVVIPTFDIKLLQPV-IFSTT  164 (171)
Q Consensus       141 d~~-----~~~~i~a~di~~~~~~-~f~~~  164 (171)
                      +++     .+++||+||+ .|+.. ++.+.
T Consensus       153 ~lp~~~~~~dL~VTaTDl-~G~~~~l~dd~  181 (739)
T TIGR03607       153 LLPTGTRPLDLFVTATDL-RGRSTRLFDDD  181 (739)
T ss_pred             ccccCCCCccEEEEEEcC-CCcEEEeecCC
Confidence            654     5799999999 66544 44444

This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.

>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase

Probab=99.39  E-value=1.7e-12  Score=105.38  Aligned_cols=50  Identities=24%  Similarity=0.347  Sum_probs=45.1

Q ss_pred             ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813           11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP   71 (171)
Q Consensus        11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~   71 (171)
                      +..+|+|+|||+||++|+||+++|+|+         .  ..+|+|+|||+||++|++++.+
T Consensus        68 g~~aLvlsGGg~~g~~h~Gvl~aL~e~---------~--l~~~~i~GtSaGAi~aa~~~~~  117 (298)
T cd07206          68 GRTALMLSGGASLGLFHLGVVKALWEQ---------D--LLPRVISGSSAGAIVAALLGTH  117 (298)
T ss_pred             CCEEEEEcCcHHHHHHHHHHHHHHHHc---------C--CCCCEEEEEcHHHHHHHHHHcC
Confidence            457899999999999999999999986         2  2589999999999999999986

Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.

>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases

Probab=99.39  E-value=1.2e-12  Score=97.21  Aligned_cols=46  Identities=37%  Similarity=0.605  Sum_probs=42.2

Q ss_pred             EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhh
Q 030813           15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLT   69 (171)
Q Consensus        15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~   69 (171)
                      |+|+|||+||++|+|+|++|+|+         .+.+.||+++|||+||++++.++
T Consensus         1 l~~~GGg~~~~~~~gvl~~l~~~---------~~~~~~~~~~G~SaGa~~~~~~~   46 (155)
T cd01819           1 LSFSGGGFRGMYHAGVLSALAER---------GLLDCVTYLAGTSGGAWVAATLY   46 (155)
T ss_pred             CEEcCcHHHHHHHHHHHHHHHHh---------CCccCCCEEEEEcHHHHHHHHHh
Confidence            68999999999999999999997         33468999999999999999988

Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.

>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]

Probab=99.38  E-value=1.6e-12  Score=102.83  Aligned_cols=127  Identities=18%  Similarity=0.203  Sum_probs=82.7

Q ss_pred             CCCCCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHH
Q 030813            6 SAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDIN   85 (171)
Q Consensus         6 ~~~~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~   85 (171)
                      |..+....+|+++|||+||++++|||+++...         + ..+||++.|||+||.+++.+.+.+ .+   .+..-+.
T Consensus         5 ~~~~~~kvaLV~EGGG~RgifTAGVLD~fl~a---------~-~~~f~~~~GvSAGA~n~~aYls~Q-~g---ra~~~~~   70 (292)
T COG4667           5 PPYQPGKVALVLEGGGQRGIFTAGVLDEFLRA---------N-FNPFDLVVGVSAGALNLVAYLSKQ-RG---RARRVIV   70 (292)
T ss_pred             CCcCCCcEEEEEecCCccceehHHHHHHHHHh---------c-cCCcCeeeeecHhHHhHHHHhhcC-Cc---hHHHHHH
Confidence            45566678999999999999999999999853         1 257999999999999999999875 22   2222222


Q ss_pred             HHHHhhCCcccCCCcccchhhHHHhhhhhhc-cCCCCChHHHHHHH-HH--HhCCCCccccCCceEEEeeeCCCCCeEEe
Q 030813           86 NFYLEHGPKIFPQISRSNFSESIASSIDKRL-LGPKYDGKYLRALV-NE--LLGDVTVKETLTNVVIPTFDIKLLQPVIF  161 (171)
Q Consensus        86 ~~~~~~~~~if~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~~l-~~--~~~~~~l~d~~~~~~i~a~di~~~~~~~f  161 (171)
                      + |... ++.|...              +.+ .+..++-+-+-+.+ +.  .|+.+++...+.+.++.|++..+++...+
T Consensus        71 ~-yt~d-~ry~~~~--------------~~vr~gn~~n~d~~~~~~~~~~~~fD~~tf~~~~~k~~~~~~~~~~g~~~~~  134 (292)
T COG4667          71 E-YTTD-RRYFGPL--------------SFVRGGNYFNLDWAFEETPQKLFPFDFDTFSQDKGKFFYMATCRQDGEAVYY  134 (292)
T ss_pred             H-hhcc-hhhcchh--------------hhhccCcccchHHHHhhccCcCCCccHHHHhcccCCeEEEEEeccCCcccee
Confidence            2 2211 1223221              111 12334443333322 22  23446777888899999999999986654


Q ss_pred             e
Q 030813          162 S  162 (171)
Q Consensus       162 ~  162 (171)
                      .
T Consensus       135 ~  135 (292)
T COG4667         135 F  135 (292)
T ss_pred             e
Confidence            4

>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]

Probab=99.32  E-value=3.8e-12  Score=109.79  Aligned_cols=163  Identities=47%  Similarity=0.707  Sum_probs=128.0

Q ss_pred             CCCCCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCC--CCcCCccce-eeeCChHHHHHHHhhCCCCCCCCccCHH
Q 030813            6 SAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPS--ARIADYFDV-VAGTSTGGLVTTMLTAPNKEGGPFIAAK   82 (171)
Q Consensus         6 ~~~~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~--~~i~~~fD~-i~GtS~Gaiia~~l~~~~~~~~~~~~~~   82 (171)
                      |......++|+|||||+||+.+.-.+..++.+++.++|..  .++.+.||+ ++|+++|+++++++-.....++|++.+.
T Consensus        29 ~~~~~~~~~lsld~gg~~gi~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~~~g~~~~gl~~aml~a~~~~~~P~~~a~  108 (503)
T KOG0513|consen   29 PSYGGLVTILSLDGGGSRGINQGVSLAYLELRLQNIDGDPSAARLADYFDVSIAGTNTGGLITAMLFAPNDCGRPRFGAT  108 (503)
T ss_pred             ccccccceEEEEcCccceehhhhhhhcccHHHHHhccCChHhhHhhhccCceeeccCCchhhhhhhhccccccCcccccc
Confidence            3444578999999999999999999999999999999974  678999999 9999999999999998887789999999


Q ss_pred             HH-HHHHHhhCCcccCCCcc-c-chhhHHHhhhhhhccCCCCCh------HHHHHHHHHHhCCCCccccCCc----eEEE
Q 030813           83 DI-NNFYLEHGPKIFPQISR-S-NFSESIASSIDKRLLGPKYDG------KYLRALVNELLGDVTVKETLTN----VVIP  149 (171)
Q Consensus        83 ~~-~~~~~~~~~~if~~~~~-~-~~~~~~~~~~~~~~~~~~y~~------~~l~~~l~~~~~~~~l~d~~~~----~~i~  149 (171)
                      ++ +.++.+.+..+|.+... + .+..+. ..+.....+..|+.      ++.....++.+|+.++.+...+    +.++
T Consensus       109 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~~~~i~  187 (503)
T KOG0513|consen  109 DILWKFNLEKAPKLLEKFDDPNFIKGDLN-LALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENLLVVIP  187 (503)
T ss_pred             chhhhhhhcCCCccccccccccccccccc-cceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCcceEEE
Confidence            99 88888888888866420 0 000000 01111123344444      5555666778999999998887    9999


Q ss_pred             eeeCCCCCeEEeeCCCcccC
Q 030813          150 TFDIKLLQPVIFSTTDVCFT  169 (171)
Q Consensus       150 a~di~~~~~~~f~~~~~~~~  169 (171)
                      ++|++..+|.+|+.|....+
T Consensus       188 ~ldl~~~~P~lf~~~~~~~~  207 (503)
T KOG0513|consen  188 CLDLKSLTPNLFSIYDALGT  207 (503)
T ss_pred             eeccCcCCceeeeeeccccc
Confidence            99999999999999887654

>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]

Probab=99.11  E-value=1.6e-10  Score=98.36  Aligned_cols=133  Identities=19%  Similarity=0.307  Sum_probs=93.4

Q ss_pred             ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813           11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE   90 (171)
Q Consensus        11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~   90 (171)
                      +.++|.|+||+.-|++|+|||+.|-|+         .+  .+.+|+|+|+|||+|++++..        +-+|+..++..
T Consensus       173 GrTAL~LsGG~tFGlfH~GVlrtL~e~---------dL--lP~IIsGsS~GaivAsl~~v~--------~~eEl~~Ll~~  233 (543)
T KOG2214|consen  173 GRTALILSGGATFGLFHIGVLRTLLEQ---------DL--LPNIISGSSAGAIVASLVGVR--------SNEELKQLLTN  233 (543)
T ss_pred             CceEEEecCCchhhhhHHHHHHHHHHc---------cc--cchhhcCCchhHHHHHHHhhc--------chHHHHHHhcc
Confidence            568999999999999999999999987         32  589999999999999999975        45788887766


Q ss_pred             hCC---cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccC---C---ceEEEeeeCCCCCeEEe
Q 030813           91 HGP---KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETL---T---NVVIPTFDIKLLQPVIF  161 (171)
Q Consensus        91 ~~~---~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~---~---~~~i~a~di~~~~~~~f  161 (171)
                      .-.   .+|.....+++ ..+ ++.+.  .+..+|...+...+.+..++.+|.+.-   .   .++|+..++ .++|.+.
T Consensus       234 ~~~~~~~if~dd~~n~~-~~i-kr~~~--~G~~~Di~~l~~~~~~~~~~lTFqEAY~rTGrIlNItV~p~s~-~e~P~lL  308 (543)
T KOG2214|consen  234 FLHSLFNIFQDDLGNLL-TII-KRYFT--QGALFDISHLACVMKKRLGNLTFQEAYDRTGRILNIVVPPSSK-SEPPRLL  308 (543)
T ss_pred             chHhhhhhhcCcchhHH-HHH-HHHHh--cchHHHHHHHHHHHHHHhcchhHHHHHHhhCceEEEEECcccc-CCChhHh
Confidence            532   34555442222 111 22211  356789999999999999988888762   2   344444443 3455555


Q ss_pred             eCCCcc
Q 030813          162 STTDVC  167 (171)
Q Consensus       162 ~~~~~~  167 (171)
                      +...++
T Consensus       309 NylTaP  314 (543)
T KOG2214|consen  309 NYLTAP  314 (543)
T ss_pred             hccCCC
Confidence            544443

>KOG3773 consensus Adiponutrin and related vesicular transport proteins; predicted alpha/beta hydrolase [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.39  E-value=1.9e-07  Score=76.25  Aligned_cols=126  Identities=18%  Similarity=0.126  Sum_probs=95.2

Q ss_pred             eEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccce-eeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813           12 ITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDV-VAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE   90 (171)
Q Consensus        12 ~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~-i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~   90 (171)
                      ...||+.|.|.-|+||.|+-..+-++.+.      .   .-|. |+|.|+|+++|..+..+.       +.+++.+..-+
T Consensus         6 r~~lSfsg~gFlg~yh~gaa~~l~~~ap~------l---l~~~~~~GaSagsl~a~~ll~~~-------~l~~a~~~l~~   69 (354)
T KOG3773|consen    6 RMNLSFSGCGFLGIYHVGAANCLPRHAPR------L---LKDRSIAGASAGSLVACDLLCGL-------SLEEATGELYK   69 (354)
T ss_pred             hhheeecCCceeEEEecchHHHHHHHHHH------H---hccccccCcccchHHHhhhhccc-------cHHHHHHHHHH
Confidence            37899999999999999999999888653      1   2344 999999999999999873       57777665555


Q ss_pred             hCCcccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCcc
Q 030813           91 HGPKIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC  167 (171)
Q Consensus        91 ~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~  167 (171)
                      +..++-.++.              ...+|.|+ .+.|++.+++.+.+.-......++.|.-|.+.+++-++.++|..+
T Consensus        70 ~v~e~~~~s~--------------g~~tP~f~~~~~l~~~le~~LPpda~~la~~rl~iSlTr~~~~~N~lis~F~s~  133 (354)
T KOG3773|consen   70 MVDEARRKSL--------------GAFTPGFNLSDRLRSGLEDFLPPDAHWLASGRLHISLTRVKDRENVLISEFPSR  133 (354)
T ss_pred             HHHHHHHhhc--------------CCCCCCcCHHHHHHHHHHHhCChHHHHHhhcceeEEEEeeeehhhhhhhccccH
Confidence            5444322221              22345555 799999999999987666677788999999999887777777654

>cd00147 cPLA2_like Cytosolic phospholipase A2, catalytic domain; hydrolyses arachidonyl phospholipids

Probab=98.35  E-value=9.4e-07  Score=75.61  Aligned_cols=55  Identities=18%  Similarity=0.300  Sum_probs=45.8

Q ss_pred             CCCceEEEEEeCCChhh-HHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHH-HHHHhhCC
Q 030813            8 EGKKITVLSIDGGGIRG-IIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGL-VTTMLTAP   71 (171)
Q Consensus         8 ~~~~~~~LsLdGGG~rG-~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gai-ia~~l~~~   71 (171)
                      .+.+..+|+++|||.|+ +.++|+|++|++.         .+.+.+++|+|+|.|+. ++.+++.+
T Consensus        39 ~~~p~i~~~~sGGG~Ra~~~~~G~l~~l~~~---------gll~~~~yisg~Sgg~w~~~~~~~~~   95 (438)
T cd00147          39 DEVPVIAILGSGGGYRAMTGGAGALKALDEG---------GLLDCVTYLSGLSGSTWLMASLYSNP   95 (438)
T ss_pred             ccCceEEEEecCchHHHHHhhhHHHHHHHhC---------CchhccceeeeccchHHHHHHHHHcC
Confidence            35568899999999999 6899999999985         57789999999999994 55555544

Catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Calcium is required for cPLA2 to bind with membranes or phospholipids. Group IV cPLA2 includes six intercellular enzymes: cPLA2alpha, cPLA2beta, cPLA2gamma, cPLA2delta, cP

>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]

Probab=98.14  E-value=1.2e-06  Score=76.05  Aligned_cols=124  Identities=19%  Similarity=0.327  Sum_probs=90.9

Q ss_pred             CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813           10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL   89 (171)
Q Consensus        10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~   89 (171)
                      ....++..+|||++   ...+|-+.++.+.    .  ..-..||++.|||+|+++++-++...       +.+++...|.
T Consensus       292 ~~~~lv~~~G~G~~---~~q~l~~~e~~~~----~--a~~~~f~w~~gtstg~~~~~~i~~~~-------s~d~v~~~y~  355 (503)
T KOG0513|consen  292 VDDNLVLSDGGGIP---IIQVLYWIEKRCG----T--AAWGYFDWFNGTSTGSTIMADIALDG-------SSDEVDRMYL  355 (503)
T ss_pred             ccceEEEecCCCCh---hHHHHHhHHHhcc----c--ccccccccccccCcCceeehhhhhcc-------cHHHHHHHHH
Confidence            44568899999999   6677778887743    2  23468999999999999999998764       6777887888


Q ss_pred             hhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCC-ceEEEee--eCCCCCeEEeeCCCc
Q 030813           90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLT-NVVIPTF--DIKLLQPVIFSTTDV  166 (171)
Q Consensus        90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~-~~~i~a~--di~~~~~~~f~~~~~  166 (171)
                      .+...+|...                  .+.|+..+++.+++..+|.....|... ++.|+..  |...-+...++||..
T Consensus       356 ~~k~~~F~~~------------------r~~~~~~~Ie~~~~~~~G~~~~~di~~~~~nl~~~~~~~~~~~l~~~rn~~~  417 (503)
T KOG0513|consen  356 QMKDVVFDGL------------------RSEYNYVRIECAIDRLFGDAPSMDIDGIRLNLTGLLVDITGEELLMARNYRH  417 (503)
T ss_pred             HHhHHhhhcc------------------cCCCCccchhhhhhcccCccccccCCcchhhhhhhhccccHHHHHHhhcccc
Confidence            7766666432                  467999999999999999977777754 4444433  333345666777765


Q ss_pred             c
Q 030813          167 C  167 (171)
Q Consensus       167 ~  167 (171)
                      .
T Consensus       418 ~  418 (503)
T KOG0513|consen  418 N  418 (503)
T ss_pred             c
Confidence            3

>cd07202 cPLA2_Grp-IVC Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent

Probab=96.92  E-value=0.00097  Score=56.78  Aligned_cols=54  Identities=20%  Similarity=0.292  Sum_probs=45.2

Q ss_pred             CCCceEEEEEeCCChhhH-HHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhC
Q 030813            8 EGKKITVLSIDGGGIRGI-IPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTA   70 (171)
Q Consensus         8 ~~~~~~~LsLdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~   70 (171)
                      .+.+...|+++|||.|.+ ..+|+|++|.+.         .+.+...+++|.|.|+-....|+.
T Consensus        36 d~~P~i~ia~SGGG~RAm~~~~G~l~al~~~---------GLl~~~tY~sglSGgsWl~~sLy~   90 (430)
T cd07202          36 DKAPVIAVLGSGGGLRAMIACLGVLSELDKA---------GLLDCVTYLAGVSGSTWCMSSLYT   90 (430)
T ss_pred             ccCCeEEEEecCccHHHHHhccHHHHHhhhC---------ChhhhhhhhccccchHHHHHHHHh
Confidence            355788999999999998 569999999885         567899999999999977555554

Group IVC cPLA2, a small 61 kDa protein, is a single domain alpha/beta hydrolase. It lacks a C2 domain; therefore, it has no Ca-dependence. Group IVC cPLA2 is also referred to as cPLA2-gamma. The cPLA2-gamma enzyme is predominantly found in cardiac and skeletal muscles, and to a lesser extent in the brain. Human cPLA2-gamma is approximately 30% identical to cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 be

>cd07201 cPLA2_Grp-IVB-IVD-IVE-IVF Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent

Probab=96.37  E-value=0.0077  Score=52.78  Aligned_cols=54  Identities=19%  Similarity=0.219  Sum_probs=44.5

Q ss_pred             CCceEEEEEeCCChhhHHH-HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813            9 GKKITVLSIDGGGIRGIIP-GTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP   71 (171)
Q Consensus         9 ~~~~~~LsLdGGG~rG~~~-~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~   71 (171)
                      +.+..+++++|||.|.+.. +|+|.+|.+.         .+.+...+++|.|.|+=....++..
T Consensus        51 ~~P~Igia~SGGGyRAml~gaG~l~al~~~---------GLLq~~tYlaGlSGg~Wl~gSLy~n  105 (541)
T cd07201          51 EVPVVAVMTTGGGTRALTSMYGSLLGLQKL---------GLLDCVSYITGLSGSTWTMATLYED  105 (541)
T ss_pred             cCCeEEEEecCccHHHHHhccHHHHhhhcC---------CchhhhheecccCccHHHHHHHHcC
Confidence            4567899999999999855 9999999763         4678999999999999885555543

Group IVB, IVD, IVE, and IVF cPLA2 consists of two domains: the regulatory C2 domain and alpha/beta hydrolase PLA2 domain. Group IVB, IVD, IVE, and IVF cPLA2 are also referred to as cPLA2-beta, -delta, -epsilon, and -zeta respectively. cPLA2-beta is approximately 30% identical to cPLA2-alpha and it shows low enzymatic activity compared to cPLA2alpha. cPLA2-beta hydrolyzes palmitic acid from 1-[14C]palmitoyl-2-arachidonoyl-PC and arachidonic acid from 1-palmitoyl-2[14C]arachidonoyl-PC, but not from 1-O-alkyl-2[3H]arachidonoyl-PC. cPLA2-delta, -epsilon, and -zeta are approximately 45-50% identical to cPLA2-beta and 31-37% identical to cPLA2-alpha. It's possible that cPLA2-beta, -delta, -epsilon, and -zeta may have arisen by gene duplication from an ancestral gene. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bon

>KOG1325 consensus Lysophospholipase [Lipid transport and metabolism]

Probab=95.48  E-value=0.0078  Score=52.96  Aligned_cols=82  Identities=20%  Similarity=0.333  Sum_probs=57.7

Q ss_pred             CCCceEEEEEeCCChhhHHH-HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHH
Q 030813            8 EGKKITVLSIDGGGIRGIIP-GTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINN   86 (171)
Q Consensus         8 ~~~~~~~LsLdGGG~rG~~~-~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~   86 (171)
                      .+.++.+++.+|||.|.... .|+|.+|.++...- |. -.+.+..++++|.|.|+=.-.-|+..+     .++...+.+
T Consensus        45 ~d~P~vaIa~SGGG~RAMl~g~G~Laamder~~~~-~l-~GLLqs~tYlaGlSGstW~vssLa~nn-----~~s~~~l~~  117 (571)
T KOG1325|consen   45 SDGPVVGIAGSGGGLRAMLSGAGALAAMDERTDNA-GL-GGLLQSATYLAGLSGGSWLVSSLAVNN-----FTSIQLLAD  117 (571)
T ss_pred             CCCCeEEEEecCCCHHHHhhhhHHHHHHHhhccCC-cc-cchhhhhhhhcccCCCceeeeeeEECC-----chHhhhhcc
Confidence            35678899999999999866 89999999973211 10 146789999999999998777777643     245566666


Q ss_pred             HHHhhCCccc
Q 030813           87 FYLEHGPKIF   96 (171)
Q Consensus        87 ~~~~~~~~if   96 (171)
                      .+-.....+|
T Consensus       118 ~~w~~~~~i~  127 (571)
T KOG1325|consen  118 NVWNLRHSIF  127 (571)
T ss_pred             chhhhhccee
Confidence            5333333333

>cd07200 cPLA2_Grp-IVA Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent

Probab=95.33  E-value=0.022  Score=49.80  Aligned_cols=52  Identities=23%  Similarity=0.269  Sum_probs=43.3

Q ss_pred             CCceEEEEEeCCChhhHHH-HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhh
Q 030813            9 GKKITVLSIDGGGIRGIIP-GTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLT   69 (171)
Q Consensus         9 ~~~~~~LsLdGGG~rG~~~-~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~   69 (171)
                      .-+..+++++|||-|.+.. +|+|.+|.+-         .+.+...+++|.|-|+=.-..++
T Consensus        42 ~~P~Iaia~SGGGyRAMl~gaG~l~Ald~g---------GLLq~aTYlaGLSGgsWlvgsl~   94 (505)
T cd07200          42 EVPVIALLGSGGGFRAMVGMSGAMKALYDS---------GVLDCATYVAGLSGSTWYMSTLY   94 (505)
T ss_pred             cCCeEEEEecCccHHHHhhccHHHHhhhcC---------ChhhhhhhhhcCCccHHHHHHHH
Confidence            5578899999999999866 9999999873         57789999999999996554444

Group IVA cPLA2, an 85 kDa protein, consists of two domains: the regulatory C2 domain and the alpha/beta hydrolase PLA2 domain. Group IVA cPLA2 is also referred to as cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (cPLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile

>cd07203 cPLA2_Fungal_PLB Fungal Phospholipase B-like; cPLA2 GrpIVA homologs; catalytic domain

Probab=95.10  E-value=0.023  Score=50.15  Aligned_cols=71  Identities=17%  Similarity=0.315  Sum_probs=52.5

Q ss_pred             CCceEEEEEeCCChhhHHH-HHHHHHHHHHhhhcC--CCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHH
Q 030813            9 GKKITVLSIDGGGIRGIIP-GTILAFLESKLQELD--GPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDIN   85 (171)
Q Consensus         9 ~~~~~~LsLdGGG~rG~~~-~gvL~~L~~~~~~~~--g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~   85 (171)
                      +-+...|+++|||-|.+.. +|+|.+|..+...-.  |. -.+.+...+++|.|-|+=+...|+..+.     .+++++.
T Consensus        61 ~~P~Igia~SGGGyRAMl~GaG~l~AlD~Rt~~~~~~gl-gGLLQsatYlaGLSGGsWlvgSl~~Nnf-----~sv~~l~  134 (552)
T cd07203          61 NGPRIGIAVSGGGYRAMLTGAGAIAAMDNRTDNATEHGL-GGLLQSSTYLSGLSGGSWLVGSLASNNF-----TSVQDLL  134 (552)
T ss_pred             cCCeEEEEecCccHHHHHhccHHHHhhhccccccccccc-ccHHHHhhHhhhcCccchhhhhhhhCCC-----CCHHHHh
Confidence            4577899999999999855 999999987632100  00 1567889999999999988888776541     2566665

Fungal phospholipase B are Group IV cPLA2 homologs. Aspergillus PLA2 is Ca-dependent, yet it does not contain a C2 domain. PLB deacylates both sn-1 and sn-2 chains of phospholipids and are abundantly expressed in fungi. It shows lysophospholipase (lysoPL) and transacylase activities. The active site residues from cPLA2 are also conserved in PLB. Like cPLA2, PLB also has a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). It includes PLB1 from Schizosaccharomyces pombe, PLB2 from Candida glabrata, and PLB3 from Saccharomyces cerevisiae. PLB1, PLB2, and PLB3 show PLB and lysoPL activities; PLB3 is specific for phosphoinositides.

>PF01735 PLA2_B: Lysophospholipase catalytic domain; InterPro: IPR002642 This family consists of lysophospholipase / phospholipase B 3

Probab=95.08  E-value=0.028  Score=49.17  Aligned_cols=58  Identities=21%  Similarity=0.360  Sum_probs=35.6

Q ss_pred             EEEEEeCCChhhH-HHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813           13 TVLSIDGGGIRGI-IPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP   71 (171)
Q Consensus        13 ~~LsLdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~   71 (171)
                      ..|+++|||-|.+ +-+|+|.+|..+-+.-.| .-.+.+..++++|.|-|+=..+.|+..
T Consensus         1 Iaia~SGGG~RAml~gaG~l~Ald~R~~~~~~-~gGLLq~~tY~sGlSGgsW~~~sl~~~   59 (491)
T PF01735_consen    1 IAIAGSGGGYRAMLAGAGVLSALDSRNPGANG-TGGLLQCATYISGLSGGSWLVGSLYSN   59 (491)
T ss_dssp             EEEEE---HHHHHHHHHHHHHHHH---------HCS-GGGECEEEE-HHHHHHHHHH---
T ss_pred             CeEEecCchHHHHHHHHHHHHHhhhhcccccc-ccchhhhhhhhhhcCcchhhhhhhhhc
Confidence            3689999999998 559999999954322110 015788999999999999888877654

1.1.5 from EC and cytosolic phospholipase A2 which also has a C2 domain IPR000008 from INTERPRO. Phospholipase B enzymes catalyse the release of fatty acids from lysophsopholipids and are capable in vitro of hydrolyzing all phospholipids extractable from yeast cells []. Cytosolic phospholipase A2 associates with natural membranes in response to physiological increases in Ca2+ and selectively hydrolyses arachidonyl phospholipids [], the aligned region corresponds the carboxy-terminal Ca2+-independent catalytic domain of the protein as discussed in [].; GO: 0004620 phospholipase activity, 0009395 phospholipid catabolic process; PDB: 1CJY_B.

>smart00022 PLAc Cytoplasmic phospholipase A2, catalytic subunit

Probab=94.65  E-value=0.037  Score=49.02  Aligned_cols=62  Identities=19%  Similarity=0.364  Sum_probs=49.0

Q ss_pred             CCceEEEEEeCCChhhHHH-HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCC
Q 030813            9 GKKITVLSIDGGGIRGIIP-GTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPN   72 (171)
Q Consensus         9 ~~~~~~LsLdGGG~rG~~~-~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~   72 (171)
                      +-+...++++|||-|.+.. +|+|.+|.++... .|. -.+.+...+++|.|.|+-+...++..+
T Consensus        74 ~~P~Igia~SGGGyRAml~gaG~l~ald~R~~~-~~l-gGLLq~~tYlaGlSGgsWlv~sl~~nn  136 (549)
T smart00022       74 DVPVIAIAGSGGGFRAMVGGAGVLKAMDNRTDG-HGL-GGLLQSATYLAGLSGGTWLVGTLASNN  136 (549)
T ss_pred             cCceEEEEecCCCHHHHHhccHHHHHhhhcccc-ccc-ccHhhhhhhhhccchHHHHHHHHhhCC
Confidence            4567899999999999855 9999999986321 111 146788999999999999988888654

Cytosolic phospholipases A2 hydrolyse arachidonyl phospholipids. Family includes phospholipases B isoforms.

>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO

Probab=80.45  E-value=3.4  Score=31.53  Aligned_cols=18  Identities=39%  Similarity=0.595  Sum_probs=16.3

Q ss_pred             ceeeeCChHHHHHHHhhC
Q 030813           53 DVVAGTSTGGLVTTMLTA   70 (171)
Q Consensus        53 D~i~GtS~Gaiia~~l~~   70 (171)
                      .+++|+|.||..|..++.
T Consensus        61 ~~liGSSlGG~~A~~La~   78 (187)
T PF05728_consen   61 VVLIGSSLGGFYATYLAE   78 (187)
T ss_pred             eEEEEEChHHHHHHHHHH
Confidence            799999999999998873

One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.

>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase

Probab=80.24  E-value=7.9  Score=31.89  Aligned_cols=19  Identities=26%  Similarity=0.363  Sum_probs=16.0

Q ss_pred             ceeeeCChHHHHHHHhhCC
Q 030813           53 DVVAGTSTGGLVTTMLTAP   71 (171)
Q Consensus        53 D~i~GtS~Gaiia~~l~~~   71 (171)
                      -.++|.|.||++|..++..
T Consensus       129 ~~l~G~S~Gg~ia~~~a~~  147 (351)
T TIGR01392       129 AAVVGGSMGGMQALEWAID  147 (351)
T ss_pred             eEEEEECHHHHHHHHHHHH
Confidence            4689999999999988743

This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.

>PRK00175 metX homoserine O-acetyltransferase; Provisional

Probab=80.21  E-value=4.8  Score=33.78  Aligned_cols=19  Identities=26%  Similarity=0.363  Sum_probs=16.1

Q ss_pred             ceeeeCChHHHHHHHhhCC
Q 030813           53 DVVAGTSTGGLVTTMLTAP   71 (171)
Q Consensus        53 D~i~GtS~Gaiia~~l~~~   71 (171)
                      -.++|.|+||.+|..++..
T Consensus       149 ~~lvG~S~Gg~ia~~~a~~  167 (379)
T PRK00175        149 AAVVGGSMGGMQALEWAID  167 (379)
T ss_pred             eEEEEECHHHHHHHHHHHh
Confidence            3799999999999888753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	171
1oxw_A	373	The Crystal Structure Of Semet Patatin Length = 373		9e-33

>pdb|1OXW|A Chain A, The Crystal Structure Of Semet Patatin Length = 373

Iteration: 1
 Score =  135 bits (341), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 72/160 (45%), Positives = 97/160 (60%), Gaps = 15/160 (9%)
Query: 9   GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTM 67
           G+ +TVLS              L FLE +LQE D  + AR+ADYFDV+ GTSTGGL+T  
Sbjct: 13  GEXVTVLSIDGGGIRGIIPATILEFLEGQLQEXDNNADARLADYFDVIGGTSTGGLLTAX 72
Query: 68  LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
           ++ PN+   PF AAK+I  FY EHGP+IF              +   ++LGPKYDGKYL 
Sbjct: 73  ISTPNENNRPFAAAKEIVPFYFEHGPQIF--------------NPSGQILGPKYDGKYLX 118
Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167
            ++ E LG+  V + LT VVI +FDIK  +PVIF+ +++ 
Sbjct: 119 QVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLA 158

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	171
1oxw_A	373	Patatin; alpha/beta class fold with approximately	2e-45

>1oxw_A Patatin; alpha/beta class fold with approximately three layers; 2.20A {Solanum cardiophyllum} SCOP: c.19.1.3 Length = 373

 Score =  151 bits (383), Expect = 2e-45
 Identities = 86/163 (52%), Positives = 111/163 (68%), Gaps = 15/163 (9%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTM 67
           G+ +TVLSIDGGGIRGIIP TIL FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M
Sbjct: 13  GEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAM 72

Query: 68  LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
           ++ PN+   PF AAK+I  FY EHGP+IF                  ++LGPKYDGKYL 
Sbjct: 73  ISTPNENNRPFAAAKEIVPFYFEHGPQIFNP--------------SGQILGPKYDGKYLM 118

Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCFTY 170
            ++ E LG+  V + LT VVI +FDIK  +PVIF+ +++  + 
Sbjct: 119 QVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSP 161

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	171
1oxw_A	373	Patatin; alpha/beta class fold with approximately	99.98
4akf_A	577	VIPD; transferase; 2.90A {Legionella pneumophila}	99.79
3tu3_B	711	EXOU; type III secretion system, SPC infectious di	99.66
1cjy_A	749	CPLA2, protein (cytosolic phospholipase A2); lipid	97.7
3im8_A	307	Malonyl acyl carrier protein transacylase; fatty a	81.73
3i1i_A	377	Homoserine O-acetyltransferase; structural genomic	81.43
3ptw_A	336	Malonyl COA-acyl carrier protein transacylase; str	80.86

>1oxw_A Patatin; alpha/beta class fold with approximately three layers; 2.20A {Solanum cardiophyllum} SCOP: c.19.1.3

Probab=99.98  E-value=2.9e-32  Score=227.08  Aligned_cols=151  Identities=58%  Similarity=0.991  Sum_probs=131.9

Q ss_pred             CCCCCCCCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCC-CCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCH
Q 030813            3 TAGSAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGP-SARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAA   81 (171)
Q Consensus         3 ~~~~~~~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~-~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~   81 (171)
                      +++...+++.++|||||||+||+++++||++||+++++++|. +.++++.||+|+|||+|||+|++|+.+...++|.+++
T Consensus         7 ~~~~~~~~~~~~LsLdGGG~RG~~~~gvL~~Lee~l~~~~G~~~~~i~~~fD~I~GTS~Gaiiaa~la~g~~~~r~~~s~   86 (373)
T 1oxw_A            7 HAMAQLGEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAA   86 (373)
T ss_dssp             -----CCSCEEEEEECCCGGGGHHHHHHHHHHHHHHHHHTTCTTCCHHHHCSEEEECTHHHHHHHHHHSBCTTSSBSSCG
T ss_pred             hhhcCCCCCeEEEEEcCCcHHHHHHHHHHHHHHHHHHhhcCCccCCchhhCCEEEEECHHHHHHHHHhcCCccCCCcCCH
Confidence            456778889999999999999999999999999998877674 4677889999999999999999999987677898999


Q ss_pred             HHHHHHHHhhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEe
Q 030813           82 KDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIF  161 (171)
Q Consensus        82 ~~~~~~~~~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f  161 (171)
                      ++|.++|.++..++|....              .+.++.|+.++|+++|++.|++.+|.|+.++++|+|||+.++++++|
T Consensus        87 ~el~~~~~~~~~~iF~~~~--------------~l~~~~~~~~~L~~~l~~~~~~~~l~d~~~~~~i~atd~~~~~~~~f  152 (373)
T 1oxw_A           87 KEIVPFYFEHGPQIFNPSG--------------QILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIF  152 (373)
T ss_dssp             GGHHHHHHHHHHHHTCCCC--------------CSSSCSCCCHHHHHHHHHHHTTCBGGGCSSEEEEEEEETTTTEEEEE
T ss_pred             HHHHHHHHHhhHhhcCCCC--------------ccccCCcCcHHHHHHHHHHHCcCcHHHcCCCEEEEeEECCCCCeEEE
Confidence            9999999998888887642              12467899999999999999999999999999999999999999999


Q ss_pred             eCCCcc
Q 030813          162 STTDVC  167 (171)
Q Consensus       162 ~~~~~~  167 (171)
                      ++|+..
T Consensus       153 ~~~~~~  158 (373)
T 1oxw_A          153 TKSNLA  158 (373)
T ss_dssp             ESSSTT
T ss_pred             eCCCCC
Confidence            999754

>4akf_A VIPD; transferase; 2.90A {Legionella pneumophila}

Probab=99.79  E-value=7.2e-20  Score=156.82  Aligned_cols=139  Identities=17%  Similarity=0.196  Sum_probs=100.7

Q ss_pred             CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813           10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL   89 (171)
Q Consensus        10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~   89 (171)
                      ++.+.|+|+|||+||++|+|+|++|++.         .+...||+|+|||+|||+|++++.+       ++++++.++|.
T Consensus        35 ~~~~~LvLsGGG~RG~~hiGVL~aLee~---------Gi~p~~d~IaGTSaGAIiAa~~A~G-------~s~~el~~~~~   98 (577)
T 4akf_A           35 PEHKGLVLSGGGAKGISYLGMIQALQER---------GKIKNLTHVSGASAGAMTASILAVG-------MDIKDIKKLIE   98 (577)
T ss_dssp             CCCCEEEECCCSSGGGTHHHHHHHHHHT---------TCGGGCCEEEECTHHHHHHHHHHTT-------CCHHHHHHHHT
T ss_pred             CCceEEEECCcHHHHHHHHHHHHHHHHc---------CCCccCCEEEeEcHhHHHHHHHHcC-------CCHHHHHHHHH
Confidence            3567999999999999999999999996         3445799999999999999999998       47999999998


Q ss_pred             hhC-CcccCCCccc--chhhHHHhhhhh------------h----------ccCCCCChH---HHHHHHHHHhC------
Q 030813           90 EHG-PKIFPQISRS--NFSESIASSIDK------------R----------LLGPKYDGK---YLRALVNELLG------  135 (171)
Q Consensus        90 ~~~-~~if~~~~~~--~~~~~~~~~~~~------------~----------~~~~~y~~~---~l~~~l~~~~~------  135 (171)
                      ++. .++|.....+  .....+ .+++.            .          ...+.|+.+   .+++++++.+.      
T Consensus        99 ~l~~~~~~d~s~l~~~~~~~ll-~~~l~~~~~~~~k~~l~~v~~~~~~~l~~~~Gl~~G~~~~~le~wl~e~l~~~~~d~  177 (577)
T 4akf_A           99 GLDITKLLDNSGVGFRARGDRF-RNILDVIYMMQMKKHLESVQQPIPPEQQMNYGILKQKIALYEDKLSRAGIVINNVDD  177 (577)
T ss_dssp             TCCTTTTSCSCSSSSCBCSHHH-HHHHHHHHHHHHHHHHTTSCSCCCSTHHHHHHHHHHHHHHHHHHHHHTTCCCSSHHH
T ss_pred             hCCHHHhhCcccccccchhhhh-hhhhhhhhhcccccccccccccccccccccCcccCCchhHHHHHHHHHHHhcccccc
Confidence            875 4455443211  000000 00000            0          113456777   88888877765      


Q ss_pred             ------------------------------------CCCccccC--------------CceEEEeeeCCCCCeEEeeCCC
Q 030813          136 ------------------------------------DVTVKETL--------------TNVVIPTFDIKLLQPVIFSTTD  165 (171)
Q Consensus       136 ------------------------------------~~~l~d~~--------------~~~~i~a~di~~~~~~~f~~~~  165 (171)
                                                          ..+|.|+.              +++.|+|||+.+|++++|++..
T Consensus       178 ~~~~~~~~~~~~~L~~~~~~~p~~l~~~kg~~tg~~~iTF~dL~~l~~~~p~~~~~~~k~L~IvATDv~TGk~v~F~~~~  257 (577)
T 4akf_A          178 IINLTKSVKDLEKLDKALNSIPTELKGAKGEQLENPRLTLGDLGRLRELLPEENKHLIKNLSVVVTNQTKHELERYSEDT  257 (577)
T ss_dssp             HHHHHHCHHHHHHHHHHHHTSCSCCBCTTCCBCCCSSCBHHHHHHHHHHSCGGGGGGSCEEEEEEEETTTTEEEEEETTT
T ss_pred             ccccccchhhhhhhhhhhccccchhhcccccccCCCCcCHHHHhhccccCccccccCCCeEEEEEEECCCCCEEEeCCCC
Confidence                                                34455553              3799999999999999999873

>3tu3_B EXOU; type III secretion system, SPC infectious diseases, structural genomics, center for struct genomics of infectious diseases, csgid; 1.92A {Pseudomonas aeruginosa} PDB: 4akx_B*

Probab=99.66  E-value=2.3e-16  Score=136.59  Aligned_cols=68  Identities=22%  Similarity=0.387  Sum_probs=58.9

Q ss_pred             CCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHH
Q 030813            9 GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFY   88 (171)
Q Consensus         9 ~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~   88 (171)
                      .++.++|+|+|||+||++++|+|++|++.         .+...||+|+|||+|||+|++++.+       ++.+++.++|
T Consensus       125 ~~p~iaLVLsGGGaRG~~hiGVLkaLeE~---------Gi~p~fD~IaGTSAGAIiAAllAaG-------~s~~el~~l~  188 (711)
T 3tu3_B          125 RPPLTSLVLSGGGAKGAAYPGAMLALEEK---------GMLDGIRSMSGSSAGGITAALLASG-------MSPAAFKTLS  188 (711)
T ss_dssp             CCCEEEEEECCCGGGGGGHHHHHHHHHHT---------TCSTTCCEEEEETTHHHHHHHHHTT-------CCHHHHHHHH
T ss_pred             CCCceEEEEcCcHHHHHHHHHHHHHHHHc---------CCCCCccEEEeecHHHHHHHHHHcC-------CCHHHHHHHH
Confidence            34678999999999999999999999986         2334699999999999999999988       4789999988


Q ss_pred             HhhC
Q 030813           89 LEHG   92 (171)
Q Consensus        89 ~~~~   92 (171)
                      ..+.
T Consensus       189 ~~ld  192 (711)
T 3tu3_B          189 DKMD  192 (711)
T ss_dssp             HTCC
T ss_pred             HhCC
Confidence            7654

>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A

Probab=97.70  E-value=2.8e-05  Score=69.61  Aligned_cols=54  Identities=24%  Similarity=0.246  Sum_probs=45.5

Q ss_pred             CCCCceEEEEEeCCChhhH-HHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhh
Q 030813            7 AEGKKITVLSIDGGGIRGI-IPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLT   69 (171)
Q Consensus         7 ~~~~~~~~LsLdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~   69 (171)
                      ...-+..+|+++|||.|++ .++|+|++|.+.         .+.+..++++|+|.|+.+.+.|.
T Consensus       184 ~~~~P~i~~~~SGGg~ra~~~~~G~l~~l~~~---------gll~~~~y~~g~sgg~w~~~~~~  238 (749)
T 1cjy_A          184 ARDVPVVAILGSGGGFRAMVGFSGVMKALYES---------GILDCATYVAGLSGSTWYMSTLY  238 (749)
T ss_dssp             CSSCCCEEEEECCCHHHHHHHHHHHHHHHHHT---------SCGGGEEEEEECHHHHHHHHHHH
T ss_pred             cccCceeEEEeccccHHHhhcchhHHHHhhhC---------CCcccccEEEecchhhHhHhhHH
Confidence            3445678999999999999 779999999985         56789999999999999955544

>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae}

Probab=81.73  E-value=3.1  Score=32.82  Aligned_cols=31  Identities=23%  Similarity=0.234  Sum_probs=22.8

Q ss_pred             CccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHH
Q 030813           50 DYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNF   87 (171)
Q Consensus        50 ~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~   87 (171)
                      ..+|.++|.|.|-+.|+..+.-       ++.++...+
T Consensus        81 i~P~~v~GHSlGE~aAa~~aG~-------ls~~da~~l  111 (307)
T 3im8_A           81 YQPDMVAGLSLGEYSALVASGA-------LDFEDAVAL  111 (307)
T ss_dssp             CCCSEEEESTTHHHHHHHHTTS-------SCHHHHHHH
T ss_pred             CCceEEEccCHHHHHHHHHcCC-------CCHHHHHHH
Confidence            3589999999999998876632       456655553

>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}

Probab=81.43  E-value=2.8  Score=32.26  Aligned_cols=20  Identities=25%  Similarity=0.527  Sum_probs=16.8

Q ss_pred             ccceeeeCChHHHHHHHhhC
Q 030813           51 YFDVVAGTSTGGLVTTMLTA   70 (171)
Q Consensus        51 ~fD~i~GtS~Gaiia~~l~~   70 (171)
                      .+.+++|.|.||.+|..++.
T Consensus       147 ~~~ilvGhS~Gg~ia~~~a~  166 (377)
T 3i1i_A          147 RLHAVMGPSAGGMIAQQWAV  166 (377)
T ss_dssp             CBSEEEEETHHHHHHHHHHH
T ss_pred             cEeeEEeeCHhHHHHHHHHH
Confidence            45668999999999998774

>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens}

Probab=80.86  E-value=3.3  Score=33.15  Aligned_cols=31  Identities=16%  Similarity=0.129  Sum_probs=22.7

Q ss_pred             CccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHH
Q 030813           50 DYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNF   87 (171)
Q Consensus        50 ~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~   87 (171)
                      ..+|.++|.|.|-+.|+..+.-       ++.++...+
T Consensus        82 i~P~~v~GHSlGE~aAa~~AG~-------ls~~dal~l  112 (336)
T 3ptw_A           82 VKSHISCGLSLGEYSALIHSGA-------INFEDGVKL  112 (336)
T ss_dssp             CCCSEEEESTTHHHHHHHHTTS-------SCHHHHHHH
T ss_pred             CCCCEEEEcCHhHHHHHHHhCC-------CCHHHHHHH
Confidence            3589999999999998876633       455555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	171
d1oxwa_	360	c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solan	1e-34

>d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]} Length = 360

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: Patatin
domain: Patatin
species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]

 Score =  122 bits (306), Expect = 1e-34
 Identities = 86/162 (53%), Positives = 111/162 (68%), Gaps = 15/162 (9%)

Query: 9   GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTM 67
           G+ +TVLSIDGGGIRGIIP TIL FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M
Sbjct: 2   GEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAM 61

Query: 68  LTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLR 127
           ++ PN+   PF AAK+I  FY EHGP+IF                  ++LGPKYDGKYL 
Sbjct: 62  ISTPNENNRPFAAAKEIVPFYFEHGPQIFNP--------------SGQILGPKYDGKYLM 107

Query: 128 ALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCFT 169
            ++ E LG+  V + LT VVI +FDIK  +PVIF+ +++  +
Sbjct: 108 QVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANS 149

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	171
d1oxwa_	360	Patatin {Heartleaf nightshade (Solanum cardiophyll	99.96
d1cjya2	580	Cytosolic phospholipase A2 catalytic domain {Human	97.08
d1mlaa1	235	Catalytic domain of malonyl-CoA ACP transacylase F	83.28

>d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]}

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: Patatin
domain: Patatin
species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]

Probab=99.96  E-value=8.6e-29  Score=201.52  Aligned_cols=146  Identities=59%  Similarity=1.026  Sum_probs=127.6

Q ss_pred             CCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCC-CCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHH
Q 030813            9 GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGP-SARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNF   87 (171)
Q Consensus         9 ~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~-~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~   87 (171)
                      ++.++||||||||+||++++++|++||+++.++.+. +.++++.||+|+|||+|||+|++++.+.....+.+..+++.+.
T Consensus         2 ~~~v~iLsldGGG~rG~~~~~vL~~L~~~~~~~~~~~~~~~~d~fD~i~GTS~Gaiia~~la~g~~~~~~~~~~~~~~~~   81 (360)
T d1oxwa_           2 GEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIVPF   81 (360)
T ss_dssp             CSCEEEEEECCCGGGGHHHHHHHHHHHHHHHHHTTCTTCCHHHHCSEEEECTHHHHHHHHHHSBCTTSSBSSCGGGHHHH
T ss_pred             CCceEEEEECCCHHHHHHHHHHHHHHHHcCCcccccCCCChhhhCCEEEEecHHHHHHHHHHcCCCchhHHHHHHHHHHH
Confidence            467999999999999999999999999998765543 5688999999999999999999999988777777888999998


Q ss_pred             HHhhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCcc
Q 030813           88 YLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC  167 (171)
Q Consensus        88 ~~~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~  167 (171)
                      |......+|....              ...++.|+.++++++|++.|++.++.+..+++.++++|+.++++++|++|+..
T Consensus        82 ~~~~~~~~f~~~~--------------~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  147 (360)
T d1oxwa_          82 YFEHGPQIFNPSG--------------QILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLA  147 (360)
T ss_dssp             HHHHHHHHTCCCC--------------CSSSCSCCCHHHHHHHHHHHTTCBGGGCSSEEEEEEEETTTTEEEEEESSSTT
T ss_pred             HHhhcchhhhccc--------------cccCcccchHHHHHHHHHHhCCchhhhccCcceeEecccCCCCeEEEeccccc
Confidence            8877666665432              22468899999999999999999999999999999999999999999998765


Q ss_pred             c
Q 030813          168 F  168 (171)
Q Consensus       168 ~  168 (171)
                      .
T Consensus       148 ~  148 (360)
T d1oxwa_         148 N  148 (360)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1cjya2 c.19.1.2 (A:142-721) Cytosolic phospholipase A2 catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: Lysophospholipase
domain: Cytosolic phospholipase A2 catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.0004  Score=58.45  Aligned_cols=55  Identities=24%  Similarity=0.383  Sum_probs=45.5

Q ss_pred             CCCceEEEEEeCCChhhHHH-HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHH-HHHHHhhCC
Q 030813            8 EGKKITVLSIDGGGIRGIIP-GTILAFLESKLQELDGPSARIADYFDVVAGTSTGG-LVTTMLTAP   71 (171)
Q Consensus         8 ~~~~~~~LsLdGGG~rG~~~-~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Ga-iia~~l~~~   71 (171)
                      ..-+..+++.+|||.|.+.. +|+|.+|.+.         .+.+...+++|.|.|+ +++.++...
T Consensus        44 ~~vP~Iai~~SGGG~RAm~~gaG~l~ald~~---------GLLq~~tY~aGlSGgsW~~~sly~n~  100 (580)
T d1cjya2          44 RDVPVVAILGSGGGFRAMVGFSGVMKALYES---------GILDCATYVAGLSGSTWYMSTLYSHP  100 (580)
T ss_dssp             SSCCCEEEEECCCHHHHHHHHHHHHHHHHHT---------SCGGGEEEEEECHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEEecCcHHHHHHHhHHHHHHHHhC---------CchHHHHHHHhccHHHHHHHHHHcCC
Confidence            45578999999999999854 8999999873         5788999999999999 566666654

>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

Probab=83.28  E-value=1.2  Score=31.99  Aligned_cols=33  Identities=18%  Similarity=0.119  Sum_probs=25.4

Q ss_pred             CccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813           50 DYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL   89 (171)
Q Consensus        50 ~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~   89 (171)
                      ..+|+++|.|.|-+.|+..+.-       ++.++..++-.
T Consensus        81 ~~p~~v~GhSlGE~aAl~~aG~-------ls~e~~~~lv~  113 (235)
T d1mlaa1          81 KAPAMMAGHSLGEYSALVCAGV-------IDFADAVRLVE  113 (235)
T ss_dssp             CCCSEEEESTHHHHHHHHHTTS-------SCHHHHHHHHH
T ss_pred             CCceeeeeccchHHHHHHHcCC-------cccccHHHHHH
Confidence            4589999999999998877643       57777766544