Citrus Sinensis ID: 030831

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-

MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQVS

cccccccccEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEccccccccccccccccEEEEEEccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHcccccccccHHHHHHHHHHHcccccccccEEEEccccccccccc

cccccccccEEEEEEccccccccHHHHHHHHHHHcccEEEEEEccHccccccccccccccEEEEcccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccEEEEccHHHHHHHcc

meekkihrahvlivpypsqghinptFQFAKRLASKGLKITLAITNFIyktkkppqpsdsvqidtisdgyddggfseAESIDAYLQNMEVAGLKTLAELITKYksssnpidcvvYDAFLYWALDVakdmpsfigvqgqyPAYFEMVLNQfsnadradLVLVNTFYKLESQVS

meekkihrahvlivpypsqghiNPTFQFAKRLASKGLKITLAITNFiyktkkppqpsdsVQIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQVS

MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQVS

******HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYK*******************************DAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKL*****

******H****LIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYK*********SVQIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLES***

MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQVS

******HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQVS

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MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQVS

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		171	2.2.26 [Sep-21-2011]
O22822		449	UDP-glycosyltransferase 7	yes	no	0.953	0.363	0.471	5e-46
O22820		449	UDP-glycosyltransferase 7	no	no	0.929	0.354	0.443	2e-42
O48676		460	UDP-glycosyltransferase 7	no	no	0.888	0.330	0.337	2e-27
Q9SYK9		453	UDP-glycosyltransferase 7	no	no	0.912	0.344	0.316	1e-24
P0C7P7		453	UDP-glycosyltransferase 7	no	no	0.912	0.344	0.321	3e-24
Q41819		471	Indole-3-acetate beta-glu	N/A	no	0.684	0.248	0.453	1e-22
Q9SKC1		457	UDP-glycosyltransferase 7	no	no	0.953	0.356	0.325	2e-21
Q6X1C0		460	Crocetin glucosyltransfer	N/A	no	0.941	0.35	0.289	1e-17
Q9LR44		469	UDP-glycosyltransferase 7	no	no	0.707	0.257	0.333	9e-16
Q9MB73		511	Limonoid UDP-glucosyltran	N/A	no	0.923	0.309	0.233	7e-15

>sp\|O22822\|U74F2_ARATH UDP-glycosyltransferase 74F2 OS=Arabidopsis thaliana GN=UGT74F2 PE=1 SV=1	Back alignment and function desciption

 Score =  183 bits (464), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 99/210 (47%), Positives = 123/210 (58%), Gaps = 47/210 (22%)

Query: 1   MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSV 60
           ME K   R HVL VPYP+QGHI P  QF KRL  KGLK TLA+T F++ +  P   S  +
Sbjct: 1   MEHK---RGHVLAVPYPTQGHITPFRQFCKRLHFKGLKTTLALTTFVFNSINP-DLSGPI 56

Query: 61  QIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYW 120
            I TISDGYD GGF  A+SID YL++ + +G KT+A++I K+++S NPI C+VYDAFL W
Sbjct: 57  SIATISDGYDHGGFETADSIDDYLKDFKTSGSKTIADIIQKHQTSDNPITCIVYDAFLPW 116

Query: 121 ALDVAK-------------------------------------------DMPSFIGVQGQ 137
           ALDVA+                                           D+PSF  V G 
Sbjct: 117 ALDVAREFGLVATPFFTQPCAVNYVYYLSYINNGSLQLPIEELPFLELQDLPSFFSVSGS 176

Query: 138 YPAYFEMVLNQFSNADRADLVLVNTFYKLE 167
           YPAYFEMVL QF N ++AD VLVN+F +LE
Sbjct: 177 YPAYFEMVLQQFINFEKADFVLVNSFQELE 206

Glycosyltransferase that glucosylates benzoic acid and derivatives. Substrate preference is benzoic acid > salicylic acid (SA) > 3-hydroxybenzoic acid > 4-hydroxybenzoic acid. Catalyzes the formation of both SA 2-O-beta-D-glucoside (SAG) and SA glucose ester (SGE). Has high affinity for the tryptophan precursor anthranilate. Catalyzes the formation of anthranilate glucose ester. Is the major source of this activity in the plant.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|O22820\|U74F1_ARATH UDP-glycosyltransferase 74F1 OS=Arabidopsis thaliana GN=UGT74F1 PE=1 SV=1	Back alignment and function description

>sp\|O48676\|U74B1_ARATH UDP-glycosyltransferase 74B1 OS=Arabidopsis thaliana GN=UGT74B1 PE=1 SV=1	Back alignment and function description

>sp\|Q9SYK9\|U74E2_ARATH UDP-glycosyltransferase 74E2 OS=Arabidopsis thaliana GN=UGT74E2 PE=1 SV=1	Back alignment and function description

>sp\|P0C7P7\|U74E1_ARATH UDP-glycosyltransferase 74E1 OS=Arabidopsis thaliana GN=UGT74E1 PE=3 SV=1	Back alignment and function description

>sp\|Q41819\|IABG_MAIZE Indole-3-acetate beta-glucosyltransferase OS=Zea mays GN=IAGLU PE=1 SV=1	Back alignment and function description

>sp\|Q9SKC1\|U74C1_ARATH UDP-glycosyltransferase 74C1 OS=Arabidopsis thaliana GN=UGT74C1 PE=2 SV=1	Back alignment and function description

>sp\|Q6X1C0\|GLT2_CROSA Crocetin glucosyltransferase 2 OS=Crocus sativus GN=GLT2 PE=1 SV=1	Back alignment and function description

>sp\|Q9LR44\|U75B1_ARATH UDP-glycosyltransferase 75B1 OS=Arabidopsis thaliana GN=UGT75B1 PE=1 SV=1	Back alignment and function description

>sp\|Q9MB73\|LGT_CITUN Limonoid UDP-glucosyltransferase OS=Citrus unshiu PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		171
225434168		458	PREDICTED: UDP-glycosyltransferase 74F2	0.976	0.364	0.493	3e-50
225434164		457	PREDICTED: UDP-glycosyltransferase 74F2	0.970	0.363	0.493	9e-48
225468356		456	PREDICTED: UDP-glycosyltransferase 74E2	0.976	0.366	0.456	4e-46
359480385		456	PREDICTED: UDP-glycosyltransferase 74E2-	0.976	0.366	0.456	9e-46
296086886		413	unnamed protein product [Vitis vinifera]	0.976	0.404	0.456	1e-45
224092886		457	predicted protein [Populus trichocarpa]	0.976	0.365	0.456	4e-45
255577907		466	UDP-glucosyltransferase, putative [Ricin	0.988	0.362	0.432	2e-44
118489490		457	unknown [Populus trichocarpa x Populus d	0.976	0.365	0.447	2e-44
15224368		449	UDP-glucosyltransferase 74F2 [Arabidopsi	0.953	0.363	0.471	2e-44
297824375		446	UDP-glucosyltransferase 74F2 [Arabidopsi	0.929	0.356	0.467	1e-43

>gi\|225434168\|ref\|XP_002275170.1\| PREDICTED: UDP-glycosyltransferase 74F2 [Vitis vinifera] gi\|147815573\|emb\|CAN68287.1\| hypothetical protein VITISV_017016 [Vitis vinifera]	Back alignment and taxonomy information

 Score =  202 bits (515), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 107/217 (49%), Positives = 131/217 (60%), Gaps = 50/217 (23%)

Query: 2   EEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQ 61
           +EKK +  H+L++PYPSQGHINP  QF++RL SKG+K TLA   FI KT KP   + SVQ
Sbjct: 3   KEKKSYGVHILVLPYPSQGHINPMLQFSRRLVSKGVKATLATPIFISKTFKPQ--AGSVQ 60

Query: 62  IDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWA 121
           +DTISDG+D+GGF +AESI  YL  +E AG +TLA+LI K++   +P DC+VYDAFL W 
Sbjct: 61  LDTISDGFDEGGFMQAESIHEYLTQLEAAGSRTLAQLIQKHRDLGHPFDCIVYDAFLPWV 120

Query: 122 LDVAK------------------------------------------------DMPSFIG 133
           LDVAK                                                DMPSFI 
Sbjct: 121 LDVAKQFGLVGAAFFTQTCAVNYIYYHAYHGLLPLPVKSTPVSIPGLPLLELRDMPSFIY 180

Query: 134 VQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQV 170
           V G YPAYF++VLNQF N  +AD VLVNTFYKLE +V
Sbjct: 181 VAGSYPAYFQLVLNQFCNVHKADWVLVNTFYKLEEEV 217

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225434164\|ref\|XP_002278455.1\| PREDICTED: UDP-glycosyltransferase 74F2 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225468356\|ref\|XP_002273866.1\| PREDICTED: UDP-glycosyltransferase 74E2 isoform 1 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359480385\|ref\|XP_003632443.1\| PREDICTED: UDP-glycosyltransferase 74E2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|296086886\|emb\|CBI33059.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224092886\|ref\|XP_002309737.1\| predicted protein [Populus trichocarpa] gi\|222852640\|gb\|EEE90187.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|255577907\|ref\|XP_002529826.1\| UDP-glucosyltransferase, putative [Ricinus communis] gi\|223530703\|gb\|EEF32575.1\| UDP-glucosyltransferase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|118489490\|gb\|ABK96547.1\| unknown [Populus trichocarpa x Populus deltoides]	Back alignment and taxonomy information

>gi|15224368|ref|NP_181910.1| UDP-glucosyltransferase 74F2 [Arabidopsis thaliana] gi|75277344|sp|O22822.1|U74F2_ARATH RecName: Full=UDP-glycosyltransferase 74F2; AltName: Full=AtSGT1; AltName: Full=Salicylic acid glucosyltransferase 1 gi|2281088|gb|AAB64024.1| putative glucosyltransferase [Arabidopsis thaliana] gi|17064814|gb|AAL32561.1| putative glucosyltransferase [Arabidopsis thaliana] gi|21592940|gb|AAM64890.1| putative glucosyltransferase [Arabidopsis thaliana] gi|33942051|gb|AAQ55278.1| At2g43820 [Arabidopsis thaliana] gi|89276712|gb|ABD66577.1| pathogen-inducible salicylic acid glucosyltransferase [Arabidopsis thaliana] gi|330255237|gb|AEC10331.1| UDP-glucosyltransferase 74F2 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|297824375\|ref\|XP_002880070.1\| UDP-glucosyltransferase 74F2 [Arabidopsis lyrata subsp. lyrata] gi\|297325909\|gb\|EFH56329.1\| UDP-glucosyltransferase 74F2 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		171
TAIR\|locus:2043949		449	UGT74F2 "UDP-glucosyltransfera	0.719	0.273	0.566	3.3e-47
TAIR\|locus:2044044		449	UGT74F1 "UDP-glycosyltransfera	0.695	0.265	0.566	4.7e-44
TAIR\|locus:2031983		453	UGT74E2 "AT1G05680" [Arabidops	0.660	0.249	0.394	1.5e-28
TAIR\|locus:2045268		457	AT2G31790 [Arabidopsis thalian	0.730	0.273	0.388	6.6e-27
TAIR\|locus:2032387		460	UGT74B1 "UDP-glucosyl transfer	0.818	0.304	0.402	2.2e-24
TAIR\|locus:2201031		469	UGT75B1 "UDP-glucosyltransfera	0.707	0.257	0.333	1.7e-19
TAIR\|locus:2130205		490	UGT84A1 "AT4G15480" [Arabidops	0.684	0.238	0.257	6.1e-17
TAIR\|locus:2089880		496	UGT84A2 "UDP-glucosyl transfer	0.695	0.239	0.292	3.2e-16
TAIR\|locus:2130215		479	UGT84A3 "AT4G15490" [Arabidops	0.701	0.250	0.294	5.8e-16
TAIR\|locus:2009557		489	UGT85A1 [Arabidopsis thaliana	0.707	0.247	0.286	1.9e-15

TAIR\|locus:2043949 UGT74F2 "UDP-glucosyltransferase 74F2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 365 (133.5 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
 Identities = 72/127 (56%), Positives = 92/127 (72%)

Query:     1 MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSV 60
             ME K   R HVL VPYP+QGHI P  QF KRL  KGLK TLA+T F++ +  P   S  +
Sbjct:     1 MEHK---RGHVLAVPYPTQGHITPFRQFCKRLHFKGLKTTLALTTFVFNSINPDL-SGPI 56

Query:    61 QIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYW 120
              I TISDGYD GGF  A+SID YL++ + +G KT+A++I K+++S NPI C+VYDAFL W
Sbjct:    57 SIATISDGYDHGGFETADSIDDYLKDFKTSGSKTIADIIQKHQTSDNPITCIVYDAFLPW 116

Query:   121 ALDVAKD 127
             ALDVA++
Sbjct:   117 ALDVARE 123

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0008194 "UDP-glycosyltransferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA;ISS

GO:0018874 "benzoate metabolic process" evidence=IDA

GO:0035251 "UDP-glucosyltransferase activity" evidence=IDA;TAS

GO:0052639 "salicylic acid glucosyltransferase (ester-forming) activity" evidence=IDA

GO:0052640 "salicylic acid glucosyltransferase (glucoside-forming) activity" evidence=IDA

GO:0052641 "benzoic acid glucosyltransferase activity" evidence=IDA

GO:0009696 "salicylic acid metabolic process" evidence=IMP

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA;IDA

GO:0080002 "UDP-glucose:4-aminobenzoate acylglucosyltransferase activity" evidence=IDA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR\|locus:2044044 UGT74F1 "UDP-glycosyltransferase 74 F1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2031983 UGT74E2 "AT1G05680" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2045268 AT2G31790 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2032387 UGT74B1 "UDP-glucosyl transferase 74B1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2201031 UGT75B1 "UDP-glucosyltransferase 75B1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2130205 UGT84A1 "AT4G15480" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2089880 UGT84A2 "UDP-glucosyl transferase 84A2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2130215 UGT84A3 "AT4G15490" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2009557 UGT85A1 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		171
PLN02173		449	PLN02173, PLN02173, UDP-glucosyl transferase famil	4e-61
PLN02555		480	PLN02555, PLN02555, limonoid glucosyltransferase	8e-22
PLN02152		455	PLN02152, PLN02152, indole-3-acetate beta-glucosyl	1e-20
PLN02410		451	PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl	5e-15
PLN02448		459	PLN02448, PLN02448, UDP-glycosyltransferase family	1e-11
PLN02562		448	PLN02562, PLN02562, UDP-glycosyltransferase	6e-11
PLN02210		456	PLN02210, PLN02210, UDP-glucosyl transferase	1e-09
PLN02863		477	PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl	4e-08
PLN02670		472	PLN02670, PLN02670, transferase, transferring glyc	4e-06
PLN03007		482	PLN03007, PLN03007, UDP-glucosyltransferase family	8e-05
PLN02554		481	PLN02554, PLN02554, UDP-glycosyltransferase family	3e-04
cd03784		401	cd03784, GT1_Gtf_like, This family includes the Gt	6e-04

>gnl\|CDD\|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein	Back alignment and domain information

 Score =  195 bits (496), Expect = 4e-61
 Identities = 92/210 (43%), Positives = 119/210 (56%), Gaps = 47/210 (22%)

Query: 1   MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSV 60
           ME+    R HVL VP+PSQGHI P  QF KRL SKG K T  +T FI+ T     PS  +
Sbjct: 1   MEKM---RGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHL-DPSSPI 56

Query: 61  QIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYW 120
            I TISDGYD GGFS A S+  YLQN +  G KT+A++I K++S+ NPI C+VYD+F+ W
Sbjct: 57  SIATISDGYDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPW 116

Query: 121 ALDVA-------------------------------------------KDMPSFIGVQGQ 137
           ALD+A                                           +D+P+F+   G 
Sbjct: 117 ALDLAREFGLAAAPFFTQSCAVNYINYLSYINNGSLTLPIKDLPLLELQDLPTFVTPTGS 176

Query: 138 YPAYFEMVLNQFSNADRADLVLVNTFYKLE 167
           + AYFEMVL QF+N D+AD VLVN+F+ L+
Sbjct: 177 HLAYFEMVLQQFTNFDKADFVLVNSFHDLD 206

Length = 449

>gnl\|CDD\|178170 PLN02555, PLN02555, limonoid glucosyltransferase	Back alignment and domain information

>gnl\|CDD\|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase	Back alignment and domain information

>gnl\|CDD\|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein	Back alignment and domain information

>gnl\|CDD\|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein	Back alignment and domain information

>gnl\|CDD\|215305 PLN02562, PLN02562, UDP-glycosyltransferase	Back alignment and domain information

>gnl\|CDD\|215127 PLN02210, PLN02210, UDP-glucosyl transferase	Back alignment and domain information

>gnl\|CDD\|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein	Back alignment and domain information

>gnl\|CDD\|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups	Back alignment and domain information

>gnl\|CDD\|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein	Back alignment and domain information

>gnl\|CDD\|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein	Back alignment and domain information

>gnl\|CDD\|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		171
PLN02173		449	UDP-glucosyl transferase family protein	100.0
PLN02555		480	limonoid glucosyltransferase	100.0
PLN02152		455	indole-3-acetate beta-glucosyltransferase	100.0
PLN02410		451	UDP-glucoronosyl/UDP-glucosyl transferase family p	100.0
PLN02562		448	UDP-glycosyltransferase	100.0
PLN02670		472	transferase, transferring glycosyl groups	99.98
PLN02863		477	UDP-glucoronosyl/UDP-glucosyl transferase family p	99.97
PLN02534		491	UDP-glycosyltransferase	99.97
PLN03004		451	UDP-glycosyltransferase	99.97
PLN02992		481	coniferyl-alcohol glucosyltransferase	99.97
PLN00164		480	glucosyltransferase; Provisional	99.97
PLN02210		456	UDP-glucosyl transferase	99.96
PLN02764		453	glycosyltransferase family protein	99.96
PLN03015		470	UDP-glucosyl transferase	99.96
PLN02448		459	UDP-glycosyltransferase family protein	99.96
PLN02207		468	UDP-glycosyltransferase	99.96
PLN02554		481	UDP-glycosyltransferase family protein	99.96
PLN00414		446	glycosyltransferase family protein	99.96
PLN02208		442	glycosyltransferase family protein	99.96
PLN02167		475	UDP-glycosyltransferase family protein	99.95
PLN03007		482	UDP-glucosyltransferase family protein	99.94
cd03784		401	GT1_Gtf_like This family includes the Gtfs, a grou	99.42
TIGR01426		392	MGT glycosyltransferase, MGT family. This model de	99.39
KOG1192		496	consensus UDP-glucuronosyl and UDP-glucosyl transf	99.25
PF03033		139	Glyco_transf_28: Glycosyltransferase family 28 N-t	98.59
COG1819		406	Glycosyl transferases, related to UDP-glucuronosyl	97.82
PF00201		500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	97.73
PF13528		318	Glyco_trans_1_3: Glycosyl transferase family 1	97.41
TIGR00661		321	MJ1255 conserved hypothetical protein. This model	97.41
PRK12446		352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	96.45
PHA03392		507	egt ecdysteroid UDP-glucosyltransferase; Provision	96.21
COG0707		357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	95.96
cd03785		350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	95.56
COG4671		400	Predicted glycosyl transferase [General function p	94.47
cd03818		396	GT1_ExpC_like This family is most closely related	94.05
PRK00726		357	murG undecaprenyldiphospho-muramoylpentapeptide be	94.05
TIGR03590		279	PseG pseudaminic acid biosynthesis-associated prot	93.83
TIGR01133		348	murG undecaprenyldiphospho-muramoylpentapeptide be	93.69
TIGR02470		784	sucr_synth sucrose synthase. This model represents	88.8
COG3980		318	spsG Spore coat polysaccharide biosynthesis protei	88.28
PLN00142		815	sucrose synthase	87.83
PF13579		160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	86.8
TIGR02468		1050	sucrsPsyn_pln sucrose phosphate synthase/possible	85.48
cd03814		364	GT1_like_2 This family is most closely related to	83.98
cd03816		415	GT1_ALG1_like This family is most closely related	81.33
cd03817		374	GT1_UGDG_like This family is most closely related	80.84
PF13439		177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	80.61
cd02067		119	B12-binding B12 binding domain (B12-BD). This doma	80.3

>PLN02173 UDP-glucosyl transferase family protein	Back alignment and domain information

Probab=100.00  E-value=6.7e-36  Score=249.81  Aligned_cols=165  Identities=55%  Similarity=0.916  Sum_probs=126.4

Q ss_pred             CccccCCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCCCCCceEEeccCCCCCCCCCCcccH
Q 030831            1 MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFSEAESI   80 (171)
Q Consensus         1 m~~~~~~~~hvv~vp~p~~GHl~P~l~La~~L~~~g~~VT~~~t~~~~~~~~~~~~~~~i~f~~~~~~~p~~~~~~~~~~   80 (171)
                      ||+   +++|||+||||+|||+|||++|||+|+++|++|||++|+.+.+++... ..+.|+|+.+|+|+|+++.+...+.
T Consensus         1 ~~~---~~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~-~~~~i~~~~ipdglp~~~~~~~~~~   76 (449)
T PLN02173          1 MEK---MRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD-PSSPISIATISDGYDQGGFSSAGSV   76 (449)
T ss_pred             CCC---CCcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC-CCCCEEEEEcCCCCCCcccccccCH
Confidence            555   468999999999999999999999999999999999999987766432 1245999999999987332333445


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhhcCCCCccEEEeCCccccHHHHHh--hCC-----------------------------
Q 030831           81 DAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAK--DMP-----------------------------  129 (171)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~iI~D~~~~w~~~vA~--dlP-----------------------------  129 (171)
                      ..++..+...+.++++++++++..+++|++|||+|+|++|+.+||+  ++|                             
T Consensus        77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~~~~~~~~~  156 (449)
T PLN02173         77 PEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYINNGSLTLPI  156 (449)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhccCCccCCC
Confidence            5677777767788999999886433345699999999999999999  122                             


Q ss_pred             ------------CCccCCCCChHHHHHHHHHhhhcCCCCEEEEcchhhhcCC
Q 030831          130 ------------SFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQ  169 (171)
Q Consensus       130 ------------~~~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~  169 (171)
                                  +++......+..++.+.+.+++.++++|||+|||+|||++
T Consensus       157 pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~  208 (449)
T PLN02173        157 KDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLH  208 (449)
T ss_pred             CCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHH
Confidence                        1111111122345566777888899999999999999985

>PLN02555 limonoid glucosyltransferase	Back alignment and domain information

>PLN02152 indole-3-acetate beta-glucosyltransferase	Back alignment and domain information

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein	Back alignment and domain information

>PLN02562 UDP-glycosyltransferase	Back alignment and domain information

>PLN02670 transferase, transferring glycosyl groups	Back alignment and domain information

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein	Back alignment and domain information

>PLN02534 UDP-glycosyltransferase	Back alignment and domain information

>PLN03004 UDP-glycosyltransferase	Back alignment and domain information

>PLN02992 coniferyl-alcohol glucosyltransferase	Back alignment and domain information

>PLN00164 glucosyltransferase; Provisional	Back alignment and domain information

>PLN02210 UDP-glucosyl transferase	Back alignment and domain information

>PLN02764 glycosyltransferase family protein	Back alignment and domain information

>PLN03015 UDP-glucosyl transferase	Back alignment and domain information

>PLN02448 UDP-glycosyltransferase family protein	Back alignment and domain information

>PLN02207 UDP-glycosyltransferase	Back alignment and domain information

>PLN02554 UDP-glycosyltransferase family protein	Back alignment and domain information

>PLN00414 glycosyltransferase family protein	Back alignment and domain information

>PLN02208 glycosyltransferase family protein	Back alignment and domain information

>PLN02167 UDP-glycosyltransferase family protein	Back alignment and domain information

>PLN03007 UDP-glucosyltransferase family protein	Back alignment and domain information

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin	Back alignment and domain information

>TIGR01426 MGT glycosyltransferase, MGT family	Back alignment and domain information

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]	Back alignment and domain information

>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]	Back alignment and domain information

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule	Back alignment and domain information

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1	Back alignment and domain information

>TIGR00661 MJ1255 conserved hypothetical protein	Back alignment and domain information

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed	Back alignment and domain information

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional	Back alignment and domain information

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis	Back alignment and domain information

>COG4671 Predicted glycosyl transferase [General function prediction only]	Back alignment and domain information

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional	Back alignment and domain information

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG	Back alignment and domain information

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	Back alignment and domain information

>TIGR02470 sucr_synth sucrose synthase	Back alignment and domain information

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PLN00142 sucrose synthase	Back alignment and domain information

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A	Back alignment and domain information

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant	Back alignment and domain information

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A	Back alignment and domain information

>cd02067 B12-binding B12 binding domain (B12-BD)	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		171
2pq6_A		482	Crystal Structure Of Medicago Truncatula Ugt85h2- I		6e-12
2vce_A		480	Characterization And Engineering Of The Bifunctiona		2e-04

>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482

Back alignment and structure

Iteration: 1

Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 10/131 (7%) Query: 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKT---KKPPQPSDS---V 60 + HV+++PYP QGHINP F+ AK L +G IT T + +K + P+ D Sbjct: 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDF 66 Query: 61 QIDTISDGYD--DGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSN--PIDCVVYDA 116 ++I DG +G ++ + Q++ LK EL+T+ S+N P+ C+V D Sbjct: 67 NFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDC 126 Query: 117 FLYWALDVAKD 127 + + + A++ Sbjct: 127 CMSFTIQAAEE 137

PyMOL of 2pq6

>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		171
3hbf_A		454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	1e-42
2pq6_A		482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	1e-42
2pq6_A		482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	6e-12
2vch_A		480	Hydroquinone glucosyltransferase; glycosyltransfer	2e-40
2c1x_A		456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	1e-39
2acv_A		463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	1e-33
2iyf_A		430	OLED, oleandomycin glycosyltransferase; antibiotic	5e-09
2iya_A		424	OLEI, oleandomycin glycosyltransferase; carbohydra	4e-07
3ia7_A		402	CALG4; glycosysltransferase, calicheamicin, enediy	7e-06
3otg_A		412	CALG1; calicheamicin, TDP, structural genomics, PS	1e-04
2p6p_A		384	Glycosyl transferase; X-RAY-diffraction,urdamycina	1e-04
3rsc_A		415	CALG2; TDP, enediyne, structural genomics, PSI-2,	2e-04

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454	Back alignment and structure

 Score =  146 bits (371), Expect = 1e-42
 Identities = 35/224 (15%), Positives = 71/224 (31%), Gaps = 64/224 (28%)

Query: 7   HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAI---TNFIYKT-KKPPQPSDSVQI 62
           +  HV ++ +P   H  P     K++A++  K+T +    T        +  +   +++ 
Sbjct: 12  NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKY 71

Query: 63  DTISDGYDDGGFSEA---ESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLY 119
             + DG   G  S     E I  +++ M+      + E +     +   I C+V DAF +
Sbjct: 72  YNVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAV---AETGKNITCLVTDAFFW 128

Query: 120 WALDV-----------------------------------------------------AK 126
           +  D+                                                     A 
Sbjct: 129 FGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPGFPELKAS 188

Query: 127 DMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQV 170
           D+P  +      P +  M+        RA+ V +N+F  +   +
Sbjct: 189 DLPEGVIKDIDVP-FATMLHKMGLELPRANAVAINSFATIHPLI 231

PyMOL of 3hbf

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482	Back alignment and structure

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482	Back alignment and structure

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480	Back alignment and structure

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456	Back alignment and structure

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463	Back alignment and structure

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430	Back alignment and structure

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424	Back alignment and structure

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402	Back alignment and structure

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412	Back alignment and structure

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384	Back alignment and structure

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		171
3hbf_A		454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	100.0
2pq6_A		482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	99.94
2c1x_A		456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	99.92
2acv_A		463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	99.91
2vch_A		480	Hydroquinone glucosyltransferase; glycosyltransfer	99.88
2iya_A		424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.69
2iyf_A		430	OLED, oleandomycin glycosyltransferase; antibiotic	99.48
4amg_A		400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.39
1iir_A		415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.36
3ia7_A		402	CALG4; glycosysltransferase, calicheamicin, enediy	99.28
3rsc_A		415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.19
2p6p_A		384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.16
1rrv_A		416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	99.15
3oti_A		398	CALG3; calicheamicin, TDP, structural genomics, PS	98.88
2yjn_A		441	ERYCIII, glycosyltransferase; transferase, cytochr	98.87
4fzr_A		398	SSFS6; structural genomics, PSI-biology, protein s	98.77
3tsa_A		391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	98.73
3h4t_A		404	Glycosyltransferase GTFA, glycosyltransferase; van	98.71
3otg_A		412	CALG1; calicheamicin, TDP, structural genomics, PS	98.63
3s2u_A		365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	97.75
1f0k_A		364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	95.58
2r60_A		499	Glycosyl transferase, group 1; rossmann-fold; 1.80	90.28
3c48_A		438	Predicted glycosyltransferases; retaining glycosyl	86.03

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*	Back alignment and structure

Probab=100.00  E-value=1.2e-32  Score=230.11  Aligned_cols=161  Identities=19%  Similarity=0.294  Sum_probs=121.3

Q ss_pred             CCceEEEEcCCCCCChHHHHHHHHHHHhCC--CeEEEEeccccccccCCCC--CCCCceEEeccCCCCCCCCCCcccHHH
Q 030831            7 HRAHVLIVPYPSQGHINPTFQFAKRLASKG--LKITLAITNFIYKTKKPPQ--PSDSVQIDTISDGYDDGGFSEAESIDA   82 (171)
Q Consensus         7 ~~~hvv~vp~p~~GHl~P~l~La~~L~~~g--~~VT~~~t~~~~~~~~~~~--~~~~i~f~~~~~~~p~~~~~~~~~~~~   82 (171)
                      .++||+++|||+|||++||++|||+|++||  ++|||++|+.+.+++.+..  ..++|+|+++|||+|+ +.+...+...
T Consensus        12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~-~~~~~~~~~~   90 (454)
T 3hbf_A           12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPK-GYVSSGNPRE   90 (454)
T ss_dssp             CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCT-TCCCCSCTTH
T ss_pred             CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCC-CccccCChHH
Confidence            478999999999999999999999999999  9999999998877664331  1357999999999987 3333333333


Q ss_pred             HHHHHHHHhHHHHHHHHHHhh-cCCCCccEEEeCCccccHHHHHh-----------------------------------
Q 030831           83 YLQNMEVAGLKTLAELITKYK-SSSNPIDCVVYDAFLYWALDVAK-----------------------------------  126 (171)
Q Consensus        83 ~~~~~~~~~~~~~~~~l~~l~-~~~~~~~~iI~D~~~~w~~~vA~-----------------------------------  126 (171)
                      ++..+...+...+++.++++. +.+++++|||+|+|++|+.+||+                                   
T Consensus        91 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~  170 (454)
T 3hbf_A           91 PIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEV  170 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCcc
Confidence            444444444456777776643 22357999999999999999998                                   


Q ss_pred             ------------------hCCCCccCCCCChHHHHHHHHHhhhcCCCCEEEEcchhhhcCC
Q 030831          127 ------------------DMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQ  169 (171)
Q Consensus       127 ------------------dlP~~~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~  169 (171)
                                        |+|+++.. +..+.+++++.+..++.++++++|+|||+|||++
T Consensus       171 ~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~  230 (454)
T 3hbf_A          171 HDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPL  230 (454)
T ss_dssp             TTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHH
T ss_pred             ccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHH
Confidence                              22222221 2223467788888899999999999999999974

PyMOL of 3hbf

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10	Back alignment and structure

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*	Back alignment and structure

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*	Back alignment and structure

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*	Back alignment and structure

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}	Back alignment and structure

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}	Back alignment and structure

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*	Back alignment and structure

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5	Back alignment and structure

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}	Back alignment and structure

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*	Back alignment and structure

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}	Back alignment and structure

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5	Back alignment and structure

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*	Back alignment and structure

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}	Back alignment and structure

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*	Back alignment and structure

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*	Back alignment and structure

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*	Back alignment and structure

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*	Back alignment and structure

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}	Back alignment and structure

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*	Back alignment and structure

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*	Back alignment and structure

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		171
d2c1xa1		450	c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc	9e-26
d2acva1		461	c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf	5e-22
d2pq6a1		473	c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe	5e-22
d2vcha1		471	c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera	3e-21
d1rrva_		401	c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am	4e-13
d1pn3a_		391	c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA	7e-11
d1iira_		401	c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol	1e-09

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

 Score = 99.8 bits (247), Expect = 9e-26
 Identities = 24/145 (16%), Positives = 46/145 (31%), Gaps = 5/145 (3%)

Query: 10  HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKK-----PPQPSDSVQIDT 64
           HV ++ +P   H  P     +RLA+       +  +                  +++   
Sbjct: 3   HVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYD 62

Query: 65  ISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDV 124
           ISDG  +G        +        A       ++     +  P+ C+V DAF+++A D+
Sbjct: 63  ISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADM 122

Query: 125 AKDMPSFIGVQGQYPAYFEMVLNQF 149
           A +M                     
Sbjct: 123 AAEMGVAWLPFWTAGPNSLSTHVYI 147

PyMOL of d2c1xa1

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461	Back information, alignment and structure

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473	Back information, alignment and structure

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471	Back information, alignment and structure

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401	Back information, alignment and structure

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391	Back information, alignment and structure

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		171
d2c1xa1		450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	99.77
d2pq6a1		473	(Iso)flavonoid glycosyltransferase {Medicago trunc	99.75
d2acva1		461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	99.75
d2vcha1		471	Hydroquinone glucosyltransferase {Thale cress (Ara	99.69
d1pn3a_		391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	99.17
d1iira_		401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	99.1
d1rrva_		401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	99.02
d1f0ka_		351	Peptidoglycan biosynthesis glycosyltransferase Mur	96.51
d1j8yf2		211	GTPase domain of the signal sequence recognition p	86.12
d2bisa1		437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	84.81
d2iw1a1		370	Lipopolysaccharide core biosynthesis protein RfaG	84.59
d1vmaa2		213	GTPase domain of the signal recognition particle r	81.83
d2qy9a2		211	GTPase domain of the signal recognition particle r	80.56

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=99.77  E-value=5.2e-18  Score=136.86  Aligned_cols=118  Identities=20%  Similarity=0.369  Sum_probs=75.4

Q ss_pred             CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEecccc---ccccCCC--CCCCCceEEeccCCCCCCCCCCcccHHH
Q 030831            8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFI---YKTKKPP--QPSDSVQIDTISDGYDDGGFSEAESIDA   82 (171)
Q Consensus         8 ~~hvv~vp~p~~GHl~P~l~La~~L~~~g~~VT~~~t~~~---~~~~~~~--~~~~~i~f~~~~~~~p~~~~~~~~~~~~   82 (171)
                      .+||+|+|+|++||++|++.||++|++|||+|||++....   .+.....  .....+++..++++++++ .....+...
T Consensus         1 ~~hvl~~p~P~~gH~~p~l~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (450)
T d2c1xa1           1 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEG-YVFAGRPQE   79 (450)
T ss_dssp             CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTT-CCCCCCTTH
T ss_pred             CCEEEEECchhHhHHHHHHHHHHHHHHCCCcEEEEEccCccchhhhhcccccccCCCceeeecCCCCCcc-hhhccchHH
Confidence            4899999999999999999999999999999999874322   2222111  113458888898887762 222222222


Q ss_pred             HHHHHHHHhHHHH-HHHHHHhhcCCCCccEEEeCCccccHHHHHh
Q 030831           83 YLQNMEVAGLKTL-AELITKYKSSSNPIDCVVYDAFLYWALDVAK  126 (171)
Q Consensus        83 ~~~~~~~~~~~~~-~~~l~~l~~~~~~~~~iI~D~~~~w~~~vA~  126 (171)
                      .+..+.......+ +.+.+.+.....++|+||+|.+..|+..+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~D~~~~~~~~~a~  124 (450)
T d2c1xa1          80 DIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAA  124 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHH
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEECCccHHHHHHHH
Confidence            2222222222222 2222223222357899999999999998888

PyMOL of d2c1xa1

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}	Back information, alignment and structure

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}	Back information, alignment and structure

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}	Back information, alignment and structure

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}	Back information, alignment and structure

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}	Back information, alignment and structure