Citrus Sinensis ID: 030857

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Protein Sequence
MKLPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Secondary Structure (PSIPRED)
cccccccccccEEEcccEEEEcccHHHHHHHHHccccEEEEEEEcccccEEEEEEEcccccccccccccccccccccccEEEEEEccccccccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEccccccccEEEEEEcccccEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEEEEEEEcccHHHHHHHHHHccccEEEEEEEEccccEEEEEEEcccHHHccccHHHHHHHHcccccEEEEEEEccHHHccccccccccccccccEEEEEEEcccHHHHHHHHHHcccEEEEccccccccccEEEEcccccEEEEEcccHHHHHcccc
Coil and Loop (DISEMBL)
mklptdtscnkrfphftmfrikdpkvsLDFYSRVLGMSLlkrldfpemkFSLYFLgyedtasapadpvdrtvwtfgkpatielthnwgtesdpdfkgyhngnseprgfghigiTVDDVYKACERFERLGvefakkpdggklkgvafikdpddywiEIFDlktigkiggst
Flexible Loop (DISEMBL)
mklptdtscnkrfphftmfrikdpkVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELthnwgtesdPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLgvefakkpdggklkgvafikdpddywIEIFdlktigkiggst
Low Complexity Region (SEG)
MKLPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Disordered region (IsUnstruct)
**********KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES***FKGYH*****PRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI****
Disordered Region (DISOPRED)
******T*CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTAS*********VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF************
Disordered Region (DISEMBL)
********CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Disordered Region (DISPRO)
******TSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT*GK*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKLPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	170	2.2.26 [Sep-21-2011]
O04885	185	Lactoylglutathione lyase	N/A	no	0.9	0.827	0.843	2e-75
O49818	186	Lactoylglutathione lyase	N/A	no	0.947	0.865	0.807	5e-75
Q9ZS21	185	Lactoylglutathione lyase	no	no	0.882	0.810	0.833	7e-74
Q42891	185	Lactoylglutathione lyase	N/A	no	0.970	0.891	0.775	5e-73
Q8H0V3	185	Lactoylglutathione lyase	yes	no	0.870	0.8	0.878	2e-70
Q9CPU0	184	Lactoylglutathione lyase	yes	no	0.876	0.809	0.673	2e-56
Q6P7Q4	184	Lactoylglutathione lyase	yes	no	0.876	0.809	0.66	3e-56
Q4R5F2	184	Lactoylglutathione lyase	N/A	no	0.835	0.771	0.650	5e-53
Q04760	184	Lactoylglutathione lyase	yes	no	0.835	0.771	0.650	1e-52
Q9HU72	176	Lactoylglutathione lyase	yes	no	0.888	0.857	0.574	2e-43

>sp|O04885|LGUL_BRAJU Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1

 Score =  281 bits (718), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 129/153 (84%), Positives = 141/153 (92%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TMFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG
Sbjct: 31  TMFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFG 90

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           +PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE+LGVEF KKP
Sbjct: 91  RPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFVKKP 150

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 169
             GK+K +AFIKDPD YWIEIFDLKTIG   G+
Sbjct: 151 HDGKMKNIAFIKDPDGYWIEIFDLKTIGTTAGN 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Brassica juncea (taxid: 3707)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|O49818|LGUL_CICAR Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1

 Score =  279 bits (714), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 130/161 (80%), Positives = 142/161 (88%)

Query: 6   DTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 65
           D +    F   TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT  AP+
Sbjct: 21  DEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPS 80

Query: 66  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 125
           +PVDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDD YKACERF
Sbjct: 81  NPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERF 140

Query: 126 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
           + LGVEF KKPD GK+KG+AFIKDPD YWIE+FD KTIG +
Sbjct: 141 QNLGVEFVKKPDDGKMKGIAFIKDPDGYWIELFDRKTIGNV 181

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Cicer arietinum (taxid: 3827)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ZS21|LGUL_SOYBN Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1

 Score =  275 bits (704), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 125/150 (83%), Positives = 139/150 (92%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYE+TA AP++P+D+ VWTF 
Sbjct: 31  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPIDKVVWTFS 90

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + ATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDD YKACERF+ LGVEF KKP
Sbjct: 91  QKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDTYKACERFQNLGVEFVKKP 150

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
           + GK+KG+AFIKDPD YWIEIFD KTIG +
Sbjct: 151 EDGKMKGIAFIKDPDGYWIEIFDRKTIGNV 180

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Active toward the hemithioacetal adducts formed by reacting methylglyoxal or phenylglyoxal with glutathione, homoglutathione or gamma-glutamylcysteine, showing no preference for homoglutathione adducts over glutathione adducts.

Glycine max (taxid: 3847)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q42891|LGUL_SOLLC Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1

 Score =  273 bits (697), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 128/165 (77%), Positives = 141/165 (85%)

Query: 6   DTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 65
           D +    F   TMFRIKDPKVSL+FYS+VLGMSLLKRLDFPEMKFSLYF+GYEDTASAP+
Sbjct: 20  DEATKGYFLQQTMFRIKDPKVSLEFYSKVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPS 79

Query: 66  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 125
           DPV+RT WTF + +T+ELTHNWGTESDP+F GYHNGNSEPRGFGHIG+TVDDVYKACERF
Sbjct: 80  DPVERTAWTFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRGFGHIGVTVDDVYKACERF 139

Query: 126 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST 170
           E LGVEF KKP  GK+KG+AFIKDPD YWIEIFD K I    GS 
Sbjct: 140 ESLGVEFVKKPLDGKMKGIAFIKDPDGYWIEIFDTKIIKDAAGSA 184

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Solanum lycopersicum (taxid: 4081)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8H0V3|LGUL_ARATH Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1

 Score =  264 bits (675), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 130/148 (87%), Positives = 139/148 (93%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TMFRIKDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT +AP DP +RTVWTFG
Sbjct: 31  TMFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFG 90

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           +PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE LGVEFAKKP
Sbjct: 91  QPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKP 150

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIG 164
           + GK+K +AFIKDPD YWIEIFDLKTIG
Sbjct: 151 NDGKMKNIAFIKDPDGYWIEIFDLKTIG 178

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9CPU0|LGUL_MOUSE Lactoylglutathione lyase OS=Mus musculus GN=Glo1 PE=1 SV=3

 Score =  217 bits (553), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 101/150 (67%), Positives = 119/150 (79%), Gaps = 1/150 (0%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF 
Sbjct: 35  TMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFS 94

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKP
Sbjct: 95  RKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 153

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
           D GK+KG+AFI+DPD YWIEI +   I  I
Sbjct: 154 DDGKMKGLAFIQDPDGYWIEILNPNKIATI 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q6P7Q4|LGUL_RAT Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3

 Score =  217 bits (552), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 99/150 (66%), Positives = 119/150 (79%), Gaps = 1/150 (0%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  +RT W F 
Sbjct: 35  TMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFS 94

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RFE LGV+F KKP
Sbjct: 95  RKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVKKP 153

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
           D GK+KG+AF++DPD YWIEI +   +  I
Sbjct: 154 DDGKMKGLAFVQDPDGYWIEILNPNKMATI 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q4R5F2|LGUL_MACFA Lactoylglutathione lyase OS=Macaca fascicularis GN=GLO1 PE=2 SV=3

 Score =  206 bits (525), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 93/143 (65%), Positives = 113/143 (79%), Gaps = 1/143 (0%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P D  ++  W   
Sbjct: 35  TMLRVKDPKKSLDFYTRVLGMTLIQKCDFPAMKFSLYFLAYEDKNDIPKDKEEKIAWALS 94

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DV+ AC+RFE LGV+F KKP
Sbjct: 95  RKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVHSACKRFEELGVKFVKKP 153

Query: 137 DGGKLKGVAFIKDPDDYWIEIFD 159
           D GK+KG+AFI+DPD YWIEI +
Sbjct: 154 DDGKMKGLAFIQDPDGYWIEILN 176

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Macaca fascicularis (taxid: 9541)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q04760|LGUL_HUMAN Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4

 Score =  205 bits (521), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 93/143 (65%), Positives = 113/143 (79%), Gaps = 1/143 (0%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   
Sbjct: 35  TMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALS 94

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKP
Sbjct: 95  RKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 153

Query: 137 DGGKLKGVAFIKDPDDYWIEIFD 159
           D GK+KG+AFI+DPD YWIEI +
Sbjct: 154 DDGKMKGLAFIQDPDGYWIEILN 176

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9HU72|LGUL_PSEAE Lactoylglutathione lyase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gloA PE=3 SV=1

 Score =  174 bits (442), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/155 (57%), Positives = 105/155 (67%), Gaps = 4/155 (2%)

Query: 13  FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTV 72
           F H TM R+KDPK SLDFYSRVLGM LL+RLDF E +FSLYFL        P    +R  
Sbjct: 24  FNH-TMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQR 82

Query: 73  WTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF 132
           +TFG+ + +ELTHNWG+ESD     YHNGN +PRGFGHI  +V D+  ACERFE LGV F
Sbjct: 83  YTFGRQSVLELTHNWGSESDD--SQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNF 140

Query: 133 AKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 167
            K  D G +K VAFI DPD YW+EI      G++G
Sbjct: 141 VKPLDRG-MKNVAFISDPDGYWVEIVQASLNGEMG 174

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	170
255565419	234	lactoylglutathione lyase, putative [Rici	0.9	0.653	0.875	8e-76
326514208	239	predicted protein [Hordeum vulgare subsp	1.0	0.711	0.770	7e-75
449459114	185	PREDICTED: lactoylglutathione lyase-like	0.882	0.810	0.88	3e-74
117203563	187	glyoxalase I [Arachis hypogaea]	0.9	0.818	0.843	3e-74
357167257	236	PREDICTED: lactoylglutathione lyase-like	0.976	0.703	0.783	6e-74
388516521	186	unknown [Medicago truncatula]	0.976	0.892	0.789	8e-74
3334244	185	RecName: Full=Lactoylglutathione lyase;	0.9	0.827	0.843	9e-74
224104697	184	predicted protein [Populus trichocarpa]	0.9	0.831	0.876	1e-73
3334245	186	RecName: Full=Lactoylglutathione lyase;	0.947	0.865	0.807	2e-73
225436504	235	PREDICTED: lactoylglutathione lyase isof	0.952	0.689	0.808	3e-73

>gi|255565419|ref|XP_002523700.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223537004|gb|EEF38640.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  287 bits (735), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 134/153 (87%), Positives = 143/153 (93%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM+RIKDPK SLDFYS VLGMSLLKRLDFPEMKFSLYF+GYE+TASAP DPV+RTVWTFG
Sbjct: 80  TMYRIKDPKQSLDFYSHVLGMSLLKRLDFPEMKFSLYFMGYENTASAPTDPVERTVWTFG 139

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF+ LGVEF KKP
Sbjct: 140 QKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFKSLGVEFVKKP 199

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 169
           + GK+KG+AFIKDPD YWIEIFDLKTIGK  GS
Sbjct: 200 EDGKMKGIAFIKDPDGYWIEIFDLKTIGKTTGS 232

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326514208|dbj|BAJ92254.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  284 bits (727), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 131/170 (77%), Positives = 148/170 (87%)

Query: 1   MKLPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT 60
           ++   D +    F   TMFR+KDPKVSLDFYSRV+GMSLLKRLDFPEMKFSLYFLGYED 
Sbjct: 69  LQAEVDPATKGYFMQQTMFRVKDPKVSLDFYSRVMGMSLLKRLDFPEMKFSLYFLGYEDL 128

Query: 61  ASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK 120
           ++AP DPV RT WTFG+ ATIELTHNWGTE+DP+FKGYHNGNS+PRGFGHIG+TVDDVYK
Sbjct: 129 SAAPVDPVQRTGWTFGQKATIELTHNWGTENDPEFKGYHNGNSDPRGFGHIGVTVDDVYK 188

Query: 121 ACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST 170
           ACERFERLGVEF KKPD GK+KG+AFIKDPD YWIEIFDLK IG++ G+ 
Sbjct: 189 ACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKRIGEVTGTA 238

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459114|ref|XP_004147291.1| PREDICTED: lactoylglutathione lyase-like [Cucumis sativus]

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 132/150 (88%), Positives = 141/150 (94%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM+RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDTASAP   VDRTVWTFG
Sbjct: 31  TMYRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPESSVDRTVWTFG 90

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDD  KACERFERLGVEF KKP
Sbjct: 91  RKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTIKACERFERLGVEFVKKP 150

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
           D GK+KG+AFIKDPD YWIEIFDLKT+GK+
Sbjct: 151 DDGKMKGIAFIKDPDGYWIEIFDLKTVGKV 180

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|117203563|gb|ABJ88950.2| glyoxalase I [Arachis hypogaea]

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 129/153 (84%), Positives = 142/153 (92%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TMFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG
Sbjct: 31  TMFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFG 90

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           +PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE+LGVEF KKP
Sbjct: 91  RPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFVKKP 150

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 169
           + GK+K +AFIKDPD YWIEIFDLKTIG   G+
Sbjct: 151 NDGKMKNIAFIKDPDGYWIEIFDLKTIGTTAGN 183

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357167257|ref|XP_003581076.1| PREDICTED: lactoylglutathione lyase-like [Brachypodium distachyon]

 Score =  281 bits (719), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 130/166 (78%), Positives = 146/166 (87%)

Query: 1   MKLPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT 60
           ++   D +    F   TMFR+KDPKVSLDFYSRV+GMSLLKRLDFP+MKFSLYFLGYED 
Sbjct: 66  LQAEIDPATKGYFMQQTMFRVKDPKVSLDFYSRVMGMSLLKRLDFPDMKFSLYFLGYEDL 125

Query: 61  ASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK 120
           +SAPADPV RT WTFG+ AT+ELTHNWGTESDP+FKGYHNGNS+PRGFGHIG+TVDDVYK
Sbjct: 126 SSAPADPVKRTGWTFGQKATLELTHNWGTESDPEFKGYHNGNSDPRGFGHIGVTVDDVYK 185

Query: 121 ACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
           ACERFERLGVEF KKPD GK+KG+AFIKDPD YWIEIFDL  IG++
Sbjct: 186 ACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLTRIGEV 231

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516521|gb|AFK46322.1| unknown [Medicago truncatula]

 Score =  281 bits (718), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 131/166 (78%), Positives = 144/166 (86%)

Query: 5   TDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAP 64
            D +    F   TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT+ AP
Sbjct: 20  VDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTSEAP 79

Query: 65  ADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACER 124
           ++ VDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDD YKACER
Sbjct: 80  SNSVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACER 139

Query: 125 FERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST 170
           F+ LGVEF KKP+ GK+KG+AFIKDPD YWIEIFD KTIG + GS 
Sbjct: 140 FQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGNVTGSA 185

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334244|sp|O04885.1|LGUL_BRAJU RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2113825|emb|CAA73691.1| Glyoxalase I [Brassica juncea]

 Score =  281 bits (718), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 129/153 (84%), Positives = 141/153 (92%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TMFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG
Sbjct: 31  TMFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFG 90

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           +PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE+LGVEF KKP
Sbjct: 91  RPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFVKKP 150

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 169
             GK+K +AFIKDPD YWIEIFDLKTIG   G+
Sbjct: 151 HDGKMKNIAFIKDPDGYWIEIFDLKTIGTTAGN 183

Source: Brassica juncea

Species: Brassica juncea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104697|ref|XP_002313532.1| predicted protein [Populus trichocarpa] gi|118481594|gb|ABK92739.1| unknown [Populus trichocarpa] gi|222849940|gb|EEE87487.1| predicted protein [Populus trichocarpa]

 Score =  280 bits (717), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 135/154 (87%), Positives = 142/154 (92%), Gaps = 1/154 (0%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED ASAP D V+RTVWTFG
Sbjct: 31  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDHASAPGDSVERTVWTFG 90

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + ATIELTHNWGTESDP+FK YHNGNSEPRGFGHIG+TVDD YKACERFERLGVEF KKP
Sbjct: 91  RKATIELTHNWGTESDPEFK-YHNGNSEPRGFGHIGVTVDDTYKACERFERLGVEFVKKP 149

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST 170
           + GK+KG+AFIKDPD YWIEIFDLKTIGKI  S 
Sbjct: 150 EDGKMKGIAFIKDPDGYWIEIFDLKTIGKITESA 183

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334245|sp|O49818.1|LGUL_CICAR RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2909424|emb|CAA12028.1| Glyoxalase I [Cicer arietinum]

 Score =  279 bits (714), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 130/161 (80%), Positives = 142/161 (88%)

Query: 6   DTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 65
           D +    F   TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT  AP+
Sbjct: 21  DEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPS 80

Query: 66  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 125
           +PVDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDD YKACERF
Sbjct: 81  NPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERF 140

Query: 126 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
           + LGVEF KKPD GK+KG+AFIKDPD YWIE+FD KTIG +
Sbjct: 141 QNLGVEFVKKPDDGKMKGIAFIKDPDGYWIELFDRKTIGNV 181

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436504|ref|XP_002276276.1| PREDICTED: lactoylglutathione lyase isoform 1 [Vitis vinifera] gi|297734925|emb|CBI17159.3| unnamed protein product [Vitis vinifera]

 Score =  279 bits (713), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 131/162 (80%), Positives = 142/162 (87%)

Query: 6   DTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 65
           D +    F   TM+RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDTASAP+
Sbjct: 70  DEATKGYFMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPS 129

Query: 66  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 125
           +  +R VWTF + ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD YKACERF
Sbjct: 130 NETERIVWTFSQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDTYKACERF 189

Query: 126 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 167
           ERLGVEF KKPD GK+KG+AFIKDPD YWIEIFDL+ IG + 
Sbjct: 190 ERLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLRRIGTVS 231

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	170
TAIR|locus:2205110	235	AT1G08110 [Arabidopsis thalian	0.870	0.629	0.878	8.6e-72
UNIPROTKB|F1N9Q2	190	GLO1 "Uncharacterized protein"	0.847	0.757	0.689	2.6e-54
MGI|MGI:95742	184	Glo1 "glyoxalase 1" [Mus muscu	0.876	0.809	0.673	3.4e-54
RGD|2702	184	Glo1 "glyoxalase 1" [Rattus no	0.835	0.771	0.685	5.5e-54
UNIPROTKB|Q5BL69	184	glo1 "Glyoxalase 1" [Xenopus (	0.852	0.788	0.673	3.8e-53
FB|FBgn0033162	176	CG1707 [Drosophila melanogaste	0.858	0.829	0.659	4.9e-53
UNIPROTKB|Q5EI50	149	Q5EI50 "GekBS101P" [Gekko japo	0.829	0.946	0.690	1.7e-52
ZFIN|ZDB-GENE-030722-9	180	glo1 "glyoxalase 1" [Danio rer	0.823	0.777	0.680	5.6e-52
UNIPROTKB|A4FUZ1	184	GLO1 "GLO1 protein" [Bos tauru	0.858	0.793	0.646	7.2e-52
UNIPROTKB|I3LDM7	184	GLO1 "Uncharacterized protein"	0.835	0.771	0.664	9.2e-52

TAIR|locus:2205110 AT1G08110 [Arabidopsis thaliana (taxid:3702)]

 Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
 Identities = 130/148 (87%), Positives = 139/148 (93%)

Query:    17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
             TMFRIKDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT +AP DP +RTVWTFG
Sbjct:    81 TMFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFG 140

Query:    77 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
             +PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE LGVEFAKKP
Sbjct:   141 QPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKP 200

Query:   137 DGGKLKGVAFIKDPDDYWIEIFDLKTIG 164
             + GK+K +AFIKDPD YWIEIFDLKTIG
Sbjct:   201 NDGKMKNIAFIKDPDGYWIEIFDLKTIG 228

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

UNIPROTKB|F1N9Q2 GLO1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 100/145 (68%), Positives = 119/145 (82%)

Query:    17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
             TM R+KDPK SLDFY+RVLGM+LL++ DFP MKFSLYFLGYED    P D  +RT WTF 
Sbjct:    41 TMLRVKDPKKSLDFYTRVLGMTLLQKFDFPPMKFSLYFLGYEDKNDIPKDKAERTSWTFS 100

Query:    77 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
             + AT+ELTHNWGTE+D + + YHNGNS+PRGFGHIGI V DV KAC+RFE LGV+F KKP
Sbjct:   101 RKATLELTHNWGTEND-EKQSYHNGNSDPRGFGHIGIAVPDVNKACKRFEELGVKFVKKP 159

Query:   137 DGGKLKGVAFIKDPDDYWIEIFDLK 161
             D GK+KG+AF++DPD YWIEI + K
Sbjct:   160 DDGKMKGLAFVQDPDGYWIEILNPK 184

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

MGI|MGI:95742 Glo1 "glyoxalase 1" [Mus musculus (taxid:10090)]

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 101/150 (67%), Positives = 119/150 (79%)

Query:    17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
             TM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF 
Sbjct:    35 TMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFS 94

Query:    77 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
             + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKP
Sbjct:    95 RKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 153

Query:   137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
             D GK+KG+AFI+DPD YWIEI +   I  I
Sbjct:   154 DDGKMKGLAFIQDPDGYWIEILNPNKIATI 183

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;IDA

GO:0005975 "carbohydrate metabolic process" evidence=ISO

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0006749 "glutathione metabolic process" evidence=ISO

GO:0009438 "methylglyoxal metabolic process" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

RGD|2702 Glo1 "glyoxalase 1" [Rattus norvegicus (taxid:10116)]

 Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
 Identities = 98/143 (68%), Positives = 117/143 (81%)

Query:    17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
             TM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  +RT W F 
Sbjct:    35 TMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFS 94

Query:    77 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
             + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RFE LGV+F KKP
Sbjct:    95 RKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVKKP 153

Query:   137 DGGKLKGVAFIKDPDDYWIEIFD 159
             D GK+KG+AF++DPD YWIEI +
Sbjct:   154 DDGKMKGLAFVQDPDGYWIEILN 176

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;ISS;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0006749 "glutathione metabolic process" evidence=IDA

GO:0009438 "methylglyoxal metabolic process" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;ISS

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q5BL69 glo1 "Glyoxalase 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 99/147 (67%), Positives = 116/147 (78%)

Query:    17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
             TM RIKDPK SL+FY+ VLGM+LL++ DFP MKFSLYF+ YED    PAD  +RT WTF 
Sbjct:    36 TMLRIKDPKKSLEFYTNVLGMTLLQKFDFPSMKFSLYFMAYEDKKDIPADVNERTAWTFS 95

Query:    77 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
             + AT+ELTHNWGTE+D   K YHNGNS+PRGFGHIG+ V DVY AC+RFE LGV F KKP
Sbjct:    96 RKATLELTHNWGTENDE--KPYHNGNSDPRGFGHIGLAVPDVYAACKRFEELGVTFVKKP 153

Query:   137 DGGKLKGVAFIKDPDDYWIEIFDLKTI 163
             D GK+KG+AFI+DPD YWIEI    T+
Sbjct:   154 DDGKMKGLAFIQDPDGYWIEILSPNTM 180

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

FB|FBgn0033162 CG1707 [Drosophila melanogaster (taxid:7227)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 97/147 (65%), Positives = 116/147 (78%)

Query:    17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
             TM+RIKDP+ SL FY+ VLGM+LL +LDFPE KFSLYFLGYE+    P DP  R  W   
Sbjct:    31 TMYRIKDPRKSLPFYTGVLGMTLLVKLDFPEAKFSLYFLGYENATDVPKDPKQRRSWALS 90

Query:    77 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
             + ATIELTHNWGTE DPD + YH GN++PRGFGHIGI V DVY AC+RF+ LGV+F KKP
Sbjct:    91 RKATIELTHNWGTERDPD-QNYHTGNTDPRGFGHIGIMVPDVYAACQRFQELGVDFVKKP 149

Query:   137 DGGKLKGVAFIKDPDDYWIEIFDLKTI 163
             D G++KG+AFIKDPD YWIEIF+  ++
Sbjct:   150 DDGRMKGLAFIKDPDGYWIEIFNAHSV 176

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q5EI50 Q5EI50 "GekBS101P" [Gekko japonicus (taxid:146911)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 98/142 (69%), Positives = 115/142 (80%)

Query:    18 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 77
             M RIKDPK SLDFY+RVLGM+LL++ DFP MKFSLYFL YED    P D  ++T WTF +
Sbjct:     1 MLRIKDPKKSLDFYTRVLGMTLLQKCDFPSMKFSLYFLAYEDKNDIPKDAKEKTAWTFSR 60

Query:    78 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 137
              AT+ELTHNWGTE+D D + YHNGNS+PRGFGHIGI V DV  AC+RFE LGV+F KKPD
Sbjct:    61 KATMELTHNWGTENDED-QTYHNGNSDPRGFGHIGIAVPDVNAACKRFEELGVKFVKKPD 119

Query:   138 GGKLKGVAFIKDPDDYWIEIFD 159
              GK+KG+AFI+DPD YWIEI +
Sbjct:   120 DGKMKGLAFIQDPDGYWIEILN 141

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

ZFIN|ZDB-GENE-030722-9 glo1 "glyoxalase 1" [Danio rerio (taxid:7955)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 96/141 (68%), Positives = 114/141 (80%)

Query:    17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
             TM R+KDP  SLDFY+R+LGM+LL++ DFP M+F+LYFLGYED    PAD  +RT WTF 
Sbjct:    30 TMLRVKDPVKSLDFYTRILGMTLLQKFDFPSMRFTLYFLGYEDKKEIPADVKERTAWTFS 89

Query:    77 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
             + ATIELTHNWG+E+D D + YHNGNS+PRGFGHIGI V DVY AC+ FE  GV F KKP
Sbjct:    90 RRATIELTHNWGSETD-DSQSYHNGNSDPRGFGHIGIAVPDVYAACKLFEENGVTFVKKP 148

Query:   137 DGGKLKGVAFIKDPDDYWIEI 157
             D GK+KG+AFI+DPD YWIEI
Sbjct:   149 DEGKMKGLAFIQDPDGYWIEI 169

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

UNIPROTKB|A4FUZ1 GLO1 "GLO1 protein" [Bos taurus (taxid:9913)]

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 95/147 (64%), Positives = 117/147 (79%)

Query:    17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
             TM RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P D  ++  W F 
Sbjct:    35 TMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPKDKDEKVAWVFS 94

Query:    77 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
             + AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RFE LG++F KKP
Sbjct:    95 RKATLELTHNWGTEDD-ETQSYHSGNSDPRGFGHIGIAVPDVHGACKRFEELGIKFVKKP 153

Query:   137 DGGKLKGVAFIKDPDDYWIEIFDLKTI 163
             D GK+KG+AFI+DPD YWIEI +  T+
Sbjct:   154 DDGKMKGLAFIQDPDGYWIEILNPNTM 180

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|I3LDM7 GLO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 95/143 (66%), Positives = 115/143 (80%)

Query:    17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
             TM RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P D  ++  W F 
Sbjct:    35 TMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPKDKSEKAAWAFS 94

Query:    77 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
             + AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RFE LGV+F KKP
Sbjct:    95 RKATLELTHNWGTEDD-ESQSYHSGNSDPRGFGHIGIAVPDVHGACKRFEELGVKFVKKP 153

Query:   137 DGGKLKGVAFIKDPDDYWIEIFD 159
             D GK+KG+AFI+DPD YWIEI +
Sbjct:   154 DDGKMKGLAFIQDPDGYWIEILN 176

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O04885	LGUL_BRAJU	4, ., 4, ., 1, ., 5	0.8431	0.9	0.8270	N/A	no
Q04760	LGUL_HUMAN	4, ., 4, ., 1, ., 5	0.6503	0.8352	0.7717	yes	no
Q9CPU0	LGUL_MOUSE	4, ., 4, ., 1, ., 5	0.6733	0.8764	0.8097	yes	no
O49818	LGUL_CICAR	4, ., 4, ., 1, ., 5	0.8074	0.9470	0.8655	N/A	no
Q8H0V3	LGUL_ARATH	4, ., 4, ., 1, ., 5	0.8783	0.8705	0.8	yes	no
Q9HU72	LGUL_PSEAE	4, ., 4, ., 1, ., 5	0.5741	0.8882	0.8579	yes	no
Q42891	LGUL_SOLLC	4, ., 4, ., 1, ., 5	0.7757	0.9705	0.8918	N/A	no
Q9ZS21	LGUL_SOYBN	4, ., 4, ., 1, ., 5	0.8333	0.8823	0.8108	no	no
Q6P7Q4	LGUL_RAT	4, ., 4, ., 1, ., 5	0.66	0.8764	0.8097	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	0.691
4th Layer	4.4.1.5	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	170
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	1e-110
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-106
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	1e-64
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	3e-62
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	3e-25
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	3e-21
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	6e-20
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	2e-13
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	6e-12
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	6e-12
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	7e-09
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	7e-07
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	5e-05
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	2e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	5e-04
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	8e-04
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	0.003
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	0.003

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score =  314 bits (805), Expect = e-110
 Identities = 133/153 (86%), Positives = 141/153 (92%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM+RIKDPK SLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDTASAP DP +RTVWTFG
Sbjct: 79  TMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFG 138

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFE LGVEF KKP
Sbjct: 139 QKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKP 198

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 169
           + GK+KG+AFIKDPD YWIEIFDLKTIG    +
Sbjct: 199 NDGKMKGIAFIKDPDGYWIEIFDLKTIGTTTVN 231

Length = 233

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score =  301 bits (772), Expect = e-106
 Identities = 131/150 (87%), Positives = 140/150 (93%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TMFRIKDPK SLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED+ +AP DP +RTVWTFG
Sbjct: 31  TMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFG 90

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDDVYKACERFE+LGVEF KKP
Sbjct: 91  RKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKP 150

Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
           D GK+KG+AFIKDPD YWIEIFDLK IG I
Sbjct: 151 DDGKMKGLAFIKDPDGYWIEIFDLKRIGGI 180

Length = 185

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  194 bits (495), Expect = 1e-64
 Identities = 78/165 (47%), Positives = 89/165 (53%), Gaps = 27/165 (16%)

Query: 2   KLPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTA 61
            L  D    KR    TM R+ D   SLDFY+ VLGM LL++ DFPEMKFSL FLGY D  
Sbjct: 6   DLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDET 65

Query: 62  SAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA 121
           SA               A IELTHNWGTE       Y  GN    GFGHI I VDDVYKA
Sbjct: 66  SA---------------AVIELTHNWGTEK------YDLGN----GFGHIAIGVDDVYKA 100

Query: 122 CERFERLGVEFAKK--PDGGKLKGVAFIKDPDDYWIEIFDLKTIG 164
           CER   LG    ++  P  G    +AF++DPD Y IE+   K+  
Sbjct: 101 CERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTK 145

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  187 bits (477), Expect = 3e-62
 Identities = 75/142 (52%), Positives = 88/142 (61%), Gaps = 24/142 (16%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM R+KD + SLDFY+ VLGM LL+R DFPE KF+L FLGY D  S              
Sbjct: 4   TMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEG------------ 51

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
               +ELT+NWGTE     + Y NGN    GFGH+   VDDVY ACER E +GVE  K P
Sbjct: 52  ---VLELTYNWGTE-----EPYDNGN----GFGHLAFAVDDVYAACERLEEMGVEVTKPP 99

Query: 137 DGGKLKGVAFIKDPDDYWIEIF 158
             G +KG+AFIKDPD YWIE+ 
Sbjct: 100 GDGGMKGIAFIKDPDGYWIELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score = 93.5 bits (232), Expect = 3e-25
 Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 31/152 (20%)

Query: 18  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 77
           M R+ D + S+DFY+ VLGM LL+  + PE K+SL F+GY                   +
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------E 45

Query: 78  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 137
            A IELT+NWG +       Y  G +    +GHI ++VD+  +ACE+  + G    +  +
Sbjct: 46  EAVIELTYNWGVDK------YELGTA----YGHIALSVDNAAEACEKIRQNGGNVTR--E 93

Query: 138 GGKLKG----VAFIKDPDDYWIEIFDLKTIGK 165
            G +KG    +AF++DPD Y IE+ + K  G+
Sbjct: 94  AGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR 125

Length = 129

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 83.2 bits (206), Expect = 3e-21
 Identities = 38/147 (25%), Positives = 54/147 (36%), Gaps = 28/147 (19%)

Query: 12  RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 71
           R  H    R+ D + SLDFY+ VLG  L++ +D  E      F                 
Sbjct: 1   RIDHV-ALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGR----------- 48

Query: 72  VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 131
                    +EL  N          G H           I  +VDDV  A +R +  GVE
Sbjct: 49  --------VLELLLNETPPPAAAGFGGH-------HIAFIAFSVDDVDAAYDRLKAAGVE 93

Query: 132 FAKKP-DGGKLKGVAFIKDPDDYWIEI 157
             ++P   G     ++ +DPD   IE+
Sbjct: 94  IVREPGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 83.7 bits (207), Expect = 6e-20
 Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 34/153 (22%)

Query: 10  NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDTASAPADP 67
            +R  H  ++R+ D   ++ FY+  LGM LL++ D PE K++  FLGY  ED+       
Sbjct: 22  KRRMLH-VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFV---- 76

Query: 68  VDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFER 127
                        +ELT+N+G +       Y  G     GFGH GI V+DV K  E  + 
Sbjct: 77  -------------VELTYNYGVDK------YDIGT----GFGHFGIAVEDVAKTVELVKA 113

Query: 128 LGVEFAKKP---DGGKLKGVAFIKDPDDYWIEI 157
            G +  ++P    GGK   +AF+KDPD Y  E+
Sbjct: 114 KGGKVTREPGPVKGGKSV-IAFVKDPDGYKFEL 145

Length = 286

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 66.0 bits (161), Expect = 2e-13
 Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 30/144 (20%)

Query: 18  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 77
           M R+ D   S+ FY +  GM LL++ D PE K+++  +GY      P D          K
Sbjct: 159 MLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGY-----GPED----------K 203

Query: 78  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 137
              +ELT+N+G         Y  GN     +  I I  DDVYK  E  + +G +  ++P 
Sbjct: 204 TTVLELTYNYGV------TEYTKGN----AYAQIAIGTDDVYKTAEAIKLVGGKITREPG 253

Query: 138 ---GGKLKGVAFIKDPDDYWIEIF 158
              G   K  A + DPD  W  +F
Sbjct: 254 PLPGINTKITACL-DPDG-WKTVF 275

Length = 286

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 58.6 bits (142), Expect = 6e-12
 Identities = 36/142 (25%), Positives = 49/142 (34%), Gaps = 34/142 (23%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
               + D + ++ FY  VLG  +L+R           FL    T                
Sbjct: 2   VGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLGGT---------------- 42

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
               +EL           F+G         G  H+   VDDV  A ER +  GVE    P
Sbjct: 43  ---RLEL-----------FEGDEPAPPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGP 88

Query: 137 DGGKLKG-VAFIKDPDDYWIEI 157
                 G VA+ +DPD   IE+
Sbjct: 89  REEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 59.4 bits (143), Expect = 6e-12
 Identities = 28/143 (19%), Positives = 43/143 (30%), Gaps = 10/143 (6%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
           H     + D + S+DFY+ VLG+ L+K           Y L + D    P + +      
Sbjct: 4   HHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAF---- 59

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 134
           FG                    G   G+                  A    +  GV    
Sbjct: 60  FGFEGRAGTGFVGDV-----ALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIEL 114

Query: 135 KPDGGKLKGVAFIKDPDDYWIEI 157
               G+     + +DPD   IE+
Sbjct: 115 GEP-GRGGVHVYFRDPDGILIEL 136

Length = 138

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 50.9 bits (122), Expect = 7e-09
 Identities = 24/144 (16%), Positives = 42/144 (29%), Gaps = 39/144 (27%)

Query: 19  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 78
             + D + +  FY  +LG  +                                    G+ 
Sbjct: 1   LPVSDLEAARAFYEELLGFEV--------------------------------EEEDGEY 28

Query: 79  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 136
           A   L          +  G    ++   G  H+   VDD+     R +  G    + P  
Sbjct: 29  AEFRLGLVLALGGFIELIGLPEPDAPGGGGVHLYFEVDDLDALVARLKAAGGTILEPPED 88

Query: 137 --DGGKLKGVAFIKDPDDYWIEIF 158
              GG+     +++DPD   IE+ 
Sbjct: 89  TPWGGR---EFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.3 bits (108), Expect = 7e-07
 Identities = 36/146 (24%), Positives = 47/146 (32%), Gaps = 37/146 (25%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW- 73
           H    R+ D + S  FY+ VLG+    R  F        F G                W 
Sbjct: 3   HVA-LRVPDLEASRAFYTDVLGLEEGPRPPFL-------FPGA---------------WL 39

Query: 74  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 133
             G    + L      E  PD      G        HI   VDD+     R +  GV + 
Sbjct: 40  YAGDGPQLHL----IEEDPPDALPEGPGR-----DDHIAFRVDDLDAFRARLKAAGVPY- 89

Query: 134 KKPDGGKLKGVA--FIKDPDDYWIEI 157
                    GV   F++DPD   IE+
Sbjct: 90  -TESDVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 40.4 bits (95), Expect = 5e-05
 Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 31/147 (21%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPAD-PVD 69
           +R  HF +F++ +   ++ FY  VLGM +L+  +F E        G +   + P D    
Sbjct: 1   RRALHF-VFKVGNRNKTIKFYREVLGMKVLRHEEFEE--------GCKAACNGPYDGKWS 51

Query: 70  RTVWTFGKPAT---IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFE 126
           +T+  +G       +ELT+N+G         Y  GN     F  I I         ++  
Sbjct: 52  KTMIGYGPEDDHFVVELTYNYGIGD------YELGND----FLGITIHSKQAVSNAKKHN 101

Query: 127 RLGVEFAKKPDGGKLKGVAFIKDPDDY 153
                    P      GV  +K P  Y
Sbjct: 102 W--------PVTEVEDGVYEVKAPGGY 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 27/146 (18%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
           H T+   +D + ++DFY+ VLG+ L+K+    +     Y L + D   +P   +  T + 
Sbjct: 4   HVTLV-TRDAQETVDFYTDVLGLRLVKKTVNQD-DPGTYHLFFGDGLGSPGTLL--TFFE 59

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVE 131
           +                D   KG       P    HI  +V     +    ER    GV 
Sbjct: 60  WP---------------DAGPKGRR----GPGQIHHIAFSVPSEASLEAWRERLRAAGVP 100

Query: 132 FAKKPDGGKLKGVAFIKDPDDYWIEI 157
            +   D    + + F +DPD   +E+
Sbjct: 101 VSGVVDRFGERSLYF-EDPDGIRLEL 125

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 37/136 (27%), Positives = 49/136 (36%), Gaps = 31/136 (22%)

Query: 22  KDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT 80
            D + +L FY  VLG+   +R + P E    L FLG  +                     
Sbjct: 9   PDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNV-------------------Q 49

Query: 81  IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA----KKP 136
           IEL      + D     +     E  G  HI   VDD+  A  R +  GV       +  
Sbjct: 50  IELIE--PLDDDSPIAKFLEKRGE--GLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIG 105

Query: 137 DGGKLKGVAFIKDPDD 152
            GGK   VAF+  P D
Sbjct: 106 AGGKR--VAFL-HPKD 118

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 28/98 (28%), Positives = 31/98 (31%), Gaps = 14/98 (14%)

Query: 55  LGYE--DTASAPADPVDRTVWTFG--KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGH 110
           LG             VD      G      +EL      ES  D  G         G  H
Sbjct: 21  LGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGESFLDKGGP--------GLHH 72

Query: 111 IGITVDDVYKACERFERLGVEFAKKP--DGGKLKGVAF 146
           I   VDD+  A  R E  GV  A K    G   + VAF
Sbjct: 73  IAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 35.6 bits (83), Expect = 0.003
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK 49
          KR  H  +  + D + +LDFY+RVLGM +++  +    K
Sbjct: 2  KRIDHVVL-TVADIEATLDFYTRVLGMEVVRFGEEVGRK 39

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 35.4 bits (82), Expect = 0.003
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)

Query: 100 NGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD----GGKLKGVAFIKDPDD 152
              +   G  H+G+ VD   +V +A  R E  G+   K+ D          V ++ DPD 
Sbjct: 51  RPGAPGGGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKV-WVTDPDG 109

Query: 153 YWIEIF 158
              E+F
Sbjct: 110 NAWEVF 115

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	170
PLN02367	233	lactoylglutathione lyase	100.0
PLN03042	185	Lactoylglutathione lyase; Provisional	99.97
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.94
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.9
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.89
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.88
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.88
PRK10291	129	glyoxalase I; Provisional	99.87
PRK11478	129	putative lyase; Provisional	99.87
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.87
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.87
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.86
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.86
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.84
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.83
PLN02300	286	lactoylglutathione lyase	99.83
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.82
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.81
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.8
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.8
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.8
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.8
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.8
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.8
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.79
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.79
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.79
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.79
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.79
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.79
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.78
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.78
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.78
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.78
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.78
PRK06724	128	hypothetical protein; Provisional	99.78
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.78
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.78
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.77
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.77
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.77
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.77
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.77
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.76
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.76
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.76
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.76
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.76
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.75
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.75
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.75
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.75
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.75
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.74
PLN02300	286	lactoylglutathione lyase	99.74
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.73
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.73
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.73
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.73
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.72
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.72
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.72
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.72
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.71
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.71
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.71
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.71
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.7
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.7
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.7
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.69
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.66
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.65
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.65
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.65
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.64
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.63
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.6
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.6
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.53
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.53
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.5
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.33
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.31
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.28
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.25
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.24
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.24
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.24
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.23
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.21
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.9
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.64
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.58
PRK10148	147	hypothetical protein; Provisional	98.48
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.46
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.34
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.32
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.24
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.09
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.23
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.23
PF15067	236	FAM124: FAM124 family	96.71
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	96.49
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	96.47
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.2
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	95.02
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	94.47
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	93.57
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	93.41
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	92.91
PLN02367	233	lactoylglutathione lyase	92.54
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	92.02
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	91.4
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	91.2
PRK11478	129	putative lyase; Provisional	91.18
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	90.96
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	90.57
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	90.56
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	90.0
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	89.93
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	89.82
PRK10291	129	glyoxalase I; Provisional	89.69
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	89.57
PLN03042	185	Lactoylglutathione lyase; Provisional	89.4
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	89.16
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	88.71
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	87.97
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	87.83
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	87.73
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	87.08
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	85.68
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	85.36
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	85.28
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	85.0
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	84.91
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	83.45
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	83.43
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	83.27
PRK11700	187	hypothetical protein; Provisional	82.97
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	82.53
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	81.93
PF02208	47	Sorb: Sorbin homologous domain; InterPro: IPR00312	81.81
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	80.49
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	80.07

>PLN02367 lactoylglutathione lyase

Probab=100.00  E-value=5e-31  Score=193.48  Aligned_cols=166  Identities=81%  Similarity=1.353  Sum_probs=136.5

Q ss_pred             CCCCCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEE
Q 030857            4 PTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL   83 (170)
Q Consensus         4 ~~~~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel   83 (170)
                      ++++.|.++.++|++|.|+|+++|++||+++|||++..+..+++.++.++|++.++....+.+...+.+|...++..|||
T Consensus        66 ~~~~~t~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LEL  145 (233)
T PLN02367         66 SPDEATKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIEL  145 (233)
T ss_pred             CCCCCCCCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEE
Confidence            57889999999999999999999999999999999999988888889999998654332233333466787777789999


Q ss_pred             EeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCcc
Q 030857           84 THNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  163 (170)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  163 (170)
                      +++++.+..+....+..++..+.|++||||.|+|+++++++|++.|+++...|..+.+.+.+|++|||||+|||+|...+
T Consensus       146 t~n~g~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        146 THNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             ecCCCCCccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecccc
Confidence            98877654343334666666667999999999999999999999999999888776666688999999999999998876


Q ss_pred             cccCCC
Q 030857          164 GKIGGS  169 (170)
Q Consensus       164 ~~~~~~  169 (170)
                      ....++
T Consensus       226 ~~~~~~  231 (233)
T PLN02367        226 GTTTVN  231 (233)
T ss_pred             cccccc
Confidence            655443

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.97  E-value=4.5e-28  Score=174.22  Aligned_cols=165  Identities=80%  Similarity=1.364  Sum_probs=125.3

Q ss_pred             CCCCCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEE
Q 030857            4 PTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL   83 (170)
Q Consensus         4 ~~~~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel   83 (170)
                      +++.+|.+++++|++|.|+|+++|++||+++|||++..+...++.++.+++++.++....++++.....|.......|||
T Consensus        18 ~~~~~~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL   97 (185)
T PLN03042         18 NPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIEL   97 (185)
T ss_pred             CCCCCCCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEE
Confidence            57788999999999999999999999999999999999877777778888887543222222333345555556779999


Q ss_pred             EeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCcc
Q 030857           84 THNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  163 (170)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  163 (170)
                      +++.+....+....+..++..+.|+.||+|.|+|+++++++|+++|+++...|..+...+.+||+||||++|||++...+
T Consensus        98 ~~~~~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~~~  177 (185)
T PLN03042         98 THNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLKRI  177 (185)
T ss_pred             EEcCCCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECCCc
Confidence            98655432111111333333345899999999999999999999999998777554344578899999999999999887


Q ss_pred             cccCC
Q 030857          164 GKIGG  168 (170)
Q Consensus       164 ~~~~~  168 (170)
                      .-+++
T Consensus       178 ~~~~~  182 (185)
T PLN03042        178 GGITA  182 (185)
T ss_pred             hhhcc
Confidence            76655

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.94  E-value=1.9e-26  Score=156.61  Aligned_cols=157  Identities=54%  Similarity=0.875  Sum_probs=134.4

Q ss_pred             CCCCCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEE
Q 030857            4 PTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL   83 (170)
Q Consensus         4 ~~~~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel   83 (170)
                      ..++++.++.+.|..++|+|+.+|+.||.+++|+.+.....+.+..+..++++.......|........|.......+||
T Consensus        13 ~~~~~~~t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~EL   92 (170)
T KOG2944|consen   13 RADSSTPTYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLEL   92 (170)
T ss_pred             ccCCCCchhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceee
Confidence            34566777899999999999999999999999999998877777778888888865544555555555888888999999


Q ss_pred             EeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           84 THNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .++++.+.++.. .+..++..++|++||||.|+|+++++++++++|+++...+.+|....++|+.||||+.|||..+.
T Consensus        93 thn~Gtes~~~~-~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen   93 THNWGTESPPDQ-AYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             ecCCCCCCCcch-hhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeecC
Confidence            999998876533 37888888899999999999999999999999999999998888877899999999999998653

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.90  E-value=5.7e-22  Score=138.62  Aligned_cols=139  Identities=53%  Similarity=0.866  Sum_probs=101.2

Q ss_pred             CCCCCCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEE
Q 030857            3 LPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIE   82 (170)
Q Consensus         3 ~~~~~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le   82 (170)
                      +-.+|-|.+++++|+.|.|+|+++|.+||+++|||++..+...++..+..++++.++..               ....++
T Consensus         7 ~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~   71 (150)
T TIGR00068         7 LVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDET---------------SAAVIE   71 (150)
T ss_pred             cccCcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCC---------------CccEEE
Confidence            44578889999999999999999999999999999998765545444455666543210               023455


Q ss_pred             EEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCC--CCccceEEEEECCCCCEEEEEec
Q 030857           83 LTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        83 l~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~--~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      +........      ...    ..+..|++|.|+|+++++++|.++|+++..++.  .....+.+||+||||++|||++.
T Consensus        72 ~~~~~~~~~------~~~----~~g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  141 (150)
T TIGR00068        72 LTHNWGTEK------YDL----GNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQR  141 (150)
T ss_pred             EeecCCCCc------ccC----CCceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEC
Confidence            543222111      111    126789999999999999999999999887663  22334578899999999999998


Q ss_pred             Cccccc
Q 030857          161 KTIGKI  166 (170)
Q Consensus       161 ~~~~~~  166 (170)
                      ....+.
T Consensus       142 ~~~~~~  147 (150)
T TIGR00068       142 KSTKDG  147 (150)
T ss_pred             Cchhhh
Confidence            776654

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.89  E-value=1.1e-21  Score=135.70  Aligned_cols=128  Identities=16%  Similarity=0.264  Sum_probs=89.8

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC-----------cceEEEeeeccCCCCCCCCcccceeeecCCCcE
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT   80 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (170)
                      .+++|++|.|+|+++|++||++ |||++..+...++           ....+.++..+                 .+...
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----------------~g~~~   63 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTP-----------------DGHSR   63 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCC-----------------CCCce
Confidence            4799999999999999999998 9999876643221           11222333211                 23568


Q ss_pred             EEEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCc-cceEEEEECCCCCEEEEEe
Q 030857           81 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        81 lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~  159 (170)
                      +||+....+....... . . .....|+.||||.|+|+++++++|+++|+++..++.... ..+.+||+||||+.|||+|
T Consensus        64 iel~~~~~~~~~~~~~-~-~-~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e  140 (142)
T cd08353          64 LELSKFHHPAVIADHR-P-A-PVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAE  140 (142)
T ss_pred             EEEEEecCCCCcCcCC-C-C-CCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeee
Confidence            9998754432211110 0 0 112347889999999999999999999999987654333 3457899999999999998


Q ss_pred             c
Q 030857          160 L  160 (170)
Q Consensus       160 ~  160 (170)
                      .
T Consensus       141 ~  141 (142)
T cd08353         141 Q  141 (142)
T ss_pred             c
Confidence            5

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.88  E-value=6.7e-21  Score=127.81  Aligned_cols=121  Identities=60%  Similarity=1.067  Sum_probs=90.3

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   93 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   93 (170)
                      ++|++|.|+|++++++||+++||+++......++..+..+++..+..               .+...+++........  
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~l~~~~~~~~--   63 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDE---------------DSEGVLELTYNWGTEE--   63 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCC---------------CCccEEEEEecCCCCC--
Confidence            58999999999999999999999999887554544556666664320               0135677765322211  


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEE
Q 030857           94 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  158 (170)
Q Consensus        94 ~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  158 (170)
                         +...    ..+..|++|.|+|+++++++++++|+++...|.....++.+||+|||||+|||+
T Consensus        64 ---~~~~----~~~~~~i~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          64 ---PYDN----GNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             ---CcCC----CCCeEEEEEEeCCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence               0111    126789999999999999999999999998876554456789999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.88  E-value=6.3e-21  Score=129.31  Aligned_cols=116  Identities=29%  Similarity=0.505  Sum_probs=85.6

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC-----------cceEEEeeeccCCCCCCCCcccceeeecCCCcE
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT   80 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (170)
                      +++.|++|.|+|+++|++||+++|||++.++..+++           ..+..+++...+.               .....
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~---------------~~~~~   65 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE---------------DDHFV   65 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCC---------------CCccE
Confidence            478999999999999999999999999988765554           3444455543211               12568


Q ss_pred             EEEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           81 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        81 lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      +||+++++..+      ++.|.    +  |++|.|++. ++.++|+++|+++...+.     +.+|++||||+.|||+.+
T Consensus        66 lEL~~n~~~~~------~~~g~----~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~-----~~~fi~DPDG~~ie~~~~  127 (127)
T cd08358          66 VELTYNYGIGD------YELGN----D--FLGITIHSK-QAVSNAKKHNWPVTEVED-----GVYEVKAPGGYKFYLIDK  127 (127)
T ss_pred             EEeEecCCCCC------CCCCC----C--EEEEEEECH-HHHHHHHHCCCceecCCC-----CEEEEECCCCCEEEEecC
Confidence            99987655432      33332    3  677777776 566999999999887664     168999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK10291 glyoxalase I; Provisional

Probab=99.87  E-value=9.1e-21  Score=129.14  Aligned_cols=124  Identities=41%  Similarity=0.753  Sum_probs=88.5

Q ss_pred             EEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 030857           18 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   97 (170)
Q Consensus        18 ~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   97 (170)
                      +|.|+|+++|++||+++|||++..+...++..+.+++++.++..               ....+++........      
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~------   59 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK------   59 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCC---------------CcceEEeeecCCCCC------
Confidence            47899999999999999999998876555555667777643210               134566654322111      


Q ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCcc--ceEEEEECCCCCEEEEEecCccccc
Q 030857           98 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKTIGKI  166 (170)
Q Consensus        98 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~~~  166 (170)
                      ...+    .++.|+||.|+|+++++++|+++|+++...+.....  .+.+||+|||||.|||++..+...+
T Consensus        60 ~~~g----~~~~hlaf~V~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~~~  126 (129)
T PRK10291         60 YELG----TAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRG  126 (129)
T ss_pred             CcCC----CCeeEEEEEeCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccccc
Confidence            1112    267899999999999999999999998865432222  2467889999999999998754443

>PRK11478 putative lyase; Provisional

Probab=99.87  E-value=1.1e-20  Score=128.41  Aligned_cols=123  Identities=24%  Similarity=0.292  Sum_probs=84.3

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC-cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .+++|++|.|+|++++++||+++|||++..+...++ ..+.. .+...                  +...++++....+.
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~------------------~~~~l~l~~~~~~~   65 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALN------------------GQYVIELFSFPFPP   65 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecC------------------CCcEEEEEEecCCC
Confidence            468999999999999999999999999865422111 11211 11111                  14577776543222


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCC-ccceEEEEECCCCCEEEEEec
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~  160 (170)
                      ..+.       .....++.|++|.|+|+++++++|+++|+++...+... ...+.+||+|||||.|||+|.
T Consensus        66 ~~~~-------~~~~~g~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         66 ERPS-------RPEACGLRHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             CCCC-------CCCCCceeEEEEEeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEeC
Confidence            1110       11123678999999999999999999999987543222 223578999999999999874

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.87  E-value=1.3e-20  Score=133.52  Aligned_cols=128  Identities=21%  Similarity=0.231  Sum_probs=87.9

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeee--cC----------------CcceEEEeeeccCCCCCCCCcccceee
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLD--FP----------------EMKFSLYFLGYEDTASAPADPVDRTVW   73 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~--~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (170)
                      .+++||+|.|+|+++|++||+++|||++..+..  ..                ...+.++++..+               
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------------   67 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTG---------------   67 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecC---------------
Confidence            479999999999999999999999998864210  00                011334444432               


Q ss_pred             ecCCCcEEEEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeec-CC---CCc-cceEEEEE
Q 030857           74 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PD---GGK-LKGVAFIK  148 (170)
Q Consensus        74 ~~~~~~~lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~-~~---~~~-~~~~~~~~  148 (170)
                         ++..+||+....+..+...  .   .....|+.|+||.|+|+++++++++++|+++... +.   .+. ..+.+||+
T Consensus        68 ---~~~~ieL~~~~~~~~~~~~--~---~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~  139 (162)
T TIGR03645        68 ---DRIGVELFEFKNQENPEDN--F---EYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYME  139 (162)
T ss_pred             ---CCCcEEEEeccCCCCCCcc--c---ccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEE
Confidence               2456999876543321110  0   0112478999999999999999999999876432 22   111 12578999


Q ss_pred             CCCCCEEEEEecCc
Q 030857          149 DPDDYWIEIFDLKT  162 (170)
Q Consensus       149 DPdG~~iel~~~~~  162 (170)
                      |||||+|||+++..
T Consensus       140 DPdG~~iEl~~~~~  153 (162)
T TIGR03645       140 DPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCEEEEEEcCh
Confidence            99999999999865

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.87  E-value=1.1e-20  Score=127.24  Aligned_cols=121  Identities=25%  Similarity=0.338  Sum_probs=85.1

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +++|++|.|+|+++|++||+++|||++......+..++..+|+..++                  +..++++........
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~~~~~~~   62 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD------------------GARLELMTRPDIAPS   62 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC------------------CcEEEEEcCcccCCC
Confidence            57999999999999999999999999865543333344445554422                  356777643221110


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEE
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  158 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  158 (170)
                      .    .   .....++.|+||.|+   |+++++++|+++|+++...|.....+ +.++++|||||.|||.
T Consensus        63 ~----~---~~~~~g~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          63 P----N---EGERTGWAHLAFSVGSKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             c----c---cCCCCceEEEEEECCCHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence            0    0   112247789999996   48999999999999998766433332 3577999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.86  E-value=2.5e-20  Score=128.24  Aligned_cols=124  Identities=19%  Similarity=0.175  Sum_probs=87.8

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   93 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   93 (170)
                      ++|++|.|.|++++++||+++|||++..+....  .....++..                   +...+++........  
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~-------------------g~~~l~l~~~~~~~~--   57 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQ-------------------GDINFVLNSPLNSFA--   57 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEc-------------------CCEEEEEecCCCCCC--
Confidence            589999999999999999999999998764322  122333331                   134566643222111  


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCcc-ceEEEEECCCCCEEEEEecCc
Q 030857           94 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        94 ~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~~  162 (170)
                      ....+.  .....+..|++|.|+|+++++++|+++|+++..+|...++ .+.+|++||||++|||+++..
T Consensus        58 ~~~~~~--~~~~~g~~hia~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~  125 (136)
T cd08342          58 PVADFL--EKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKG  125 (136)
T ss_pred             chHHHH--HhcCCceEEEEEEeCCHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecCC
Confidence            000000  0112367899999999999999999999999988876333 458899999999999999654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=7e-20  Score=123.11  Aligned_cols=122  Identities=24%  Similarity=0.323  Sum_probs=85.8

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC-cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ++++|++|.|.|++++++||+++||++........+ ..+.+ .+...                  +...++++......
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~------------------~~~~i~l~~~~~~~   62 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLN------------------GGYQLELFSFPNPP   62 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecC------------------CCcEEEEEEcCCCC
Confidence            478999999999999999999999999876533222 22222 22211                  13567776543221


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCcc-ceEEEEECCCCCEEEEEe
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~  159 (170)
                      ...    .   .....+..|++|.|+|+++++++++++|+++...+..... .+.+|++||+||+|||+|
T Consensus        63 ~~~----~---~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          63 ERP----S---YPEACGLRHLAFSVEDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCC----C---CCcCCCceEEEEEeCCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            100    0   0112377899999999999999999999998876644333 347899999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.84  E-value=4.7e-20  Score=124.84  Aligned_cols=124  Identities=25%  Similarity=0.370  Sum_probs=87.2

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +++|++|.|+|++++++||+++||+++......++.++..+++..+                   ...++|.........
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~i~l~~~~~~~~~   61 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG-------------------NTKVELLEPLGEDSP   61 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC-------------------CEEEEEEecCCCCCh
Confidence            5799999999999999999999999997654333334455555432                   346777653222110


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeec-CCCCccc-eEEEE--ECCCCCEEEEEe
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLK-GVAFI--KDPDDYWIEIFD  159 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~-~~~~~~~-~~~~~--~DPdG~~iel~~  159 (170)
                        ...+...  ...+..|+||.|+|+++++++|+++|+++..+ |..+.++ +.+|+  +||||++||++|
T Consensus        62 --~~~~~~~--~~~g~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        62 --IAKFLEK--NGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             --HHHHHhc--CCCceEEEEEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence              0001011  12377899999999999999999999999864 5555444 45566  799999999976

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.83  E-value=6.5e-19  Score=122.28  Aligned_cols=116  Identities=18%  Similarity=0.200  Sum_probs=80.9

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcc-eEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK-FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .+++|++|.|+|++++++||+++|||++..+...++.. ....|+..+..                 ...+.+..  .+ 
T Consensus         5 ~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-----------------~h~~~~~~--~~-   64 (143)
T cd07243           5 HRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-----------------PHDIAFVG--GP-   64 (143)
T ss_pred             ceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-----------------cceEEEec--CC-
Confidence            47999999999999999999999999987664332222 12334432211                 12333321  01 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCeEeecCCC-Cc-cceEEEEECCCCCEEEEEecC
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                                    ..+++|+||.|+|+++   ++++|+++|+++...|.. +. .++.+||+|||||.|||+...
T Consensus        65 --------------~~~~~Hiaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~~  126 (143)
T cd07243          65 --------------DGKLHHFSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAGG  126 (143)
T ss_pred             --------------CCCceEEEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecCc
Confidence                          1267899999999887   568999999998765532 21 245789999999999997643

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>PLN02300 lactoylglutathione lyase

Probab=99.83  E-value=8.6e-19  Score=134.66  Aligned_cols=127  Identities=37%  Similarity=0.636  Sum_probs=93.0

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++|++|.|+|+++|++||+++|||++..+...++..+...++..+...               ....+++....+..
T Consensus        22 i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~lel~~~~~~~   86 (286)
T PLN02300         22 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPED---------------SNFVVELTYNYGVD   86 (286)
T ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCC---------------CceEEEEeccCCCC
Confidence            458999999999999999999999999998765545445556666543210               13466775432221


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCcc--ceEEEEECCCCCEEEEEecCc
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~  162 (170)
                      .      ...    ..++.|++|.|+|+++++++++++|+++...|...+.  .+.+||+|||||.|||+++..
T Consensus        87 ~------~~~----~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  150 (286)
T PLN02300         87 K------YDI----GTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGP  150 (286)
T ss_pred             c------ccc----CCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Confidence            1      111    2377899999999999999999999998877643322  346789999999999999753

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.82  E-value=3.2e-19  Score=125.14  Aligned_cols=121  Identities=15%  Similarity=0.172  Sum_probs=82.3

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecC-CcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      +++||+|.|+|+++|++||+++|||++......+ ......+|+..+..                 ...++.....    
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~~----   59 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRG-----------------EEYVDHHTLA----   59 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCC-----------------CCcccchHHH----
Confidence            5799999999999999999999999987654433 22234556554221                 0011110000    


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHH---HHHHhcCCeEeecCCCCcc--ceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~---~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~  162 (170)
                            +..  ....+++|+||.|+|++++.   ++|+++|+++...+.....  ..++|++|||||+|||.....
T Consensus        60 ------l~~--~~~~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~  127 (153)
T cd07257          60 ------LAQ--GPESGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGD  127 (153)
T ss_pred             ------Hhc--CCCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCce
Confidence                  000  00237899999999999986   9999999998866533222  236799999999999997653

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=3e-18  Score=114.06  Aligned_cols=119  Identities=19%  Similarity=0.336  Sum_probs=83.7

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 030857           16 FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   95 (170)
Q Consensus        16 hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   95 (170)
                      |++|.|.|++++++||+++|||++..+....+ +...+.+...+.                ....+++........  . 
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~----------------~~~~l~~~~~~~~~~--~-   60 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS----------------PETSLVLAPPANPAA--M-   60 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC----------------CeeEEEEeCCCCccc--c-
Confidence            89999999999999999999999987754222 233343432210                023455543222111  0 


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEe
Q 030857           96 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        96 ~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  159 (170)
                          . .....+..|++|.|+|+++++++++++|+++...+....+++.+|++|||||.|||+|
T Consensus        61 ----~-~~~~~~~~~~~~~v~di~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          61 ----S-GLQPGGTPGLVLATDDIDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             ----c-cccCCCceEEEEEehHHHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence                0 0112367799999999999999999999999987744445678999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.80  E-value=4.3e-18  Score=113.15  Aligned_cols=113  Identities=19%  Similarity=0.184  Sum_probs=80.9

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   93 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   93 (170)
                      +.|++|.|+|++++++||+++||+++..... ....  .+++..++                  ...+.++......   
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~--~~~~~~~~------------------~~~~~~~~~~~~~---   56 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGD--YAVFSTGG------------------GAVGGLMKAPEPA---   56 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCc--eEEEEeCC------------------ccEEEEecCCCCC---
Confidence            4799999999999999999999999976542 1122  23333221                  1234443322110   


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCc-cceEEEEECCCCCEEEEEe
Q 030857           94 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        94 ~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~  159 (170)
                               .......|++|.|+|+++++++|+++|+++..+|...+ .++.+|++|||||.|+|+|
T Consensus        57 ---------~~~~~~~~~~f~v~di~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          57 ---------AGSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             ---------CCCCCeEEEEEEeCCHHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence                     01124579999999999999999999999988775444 4568999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.80  E-value=2.8e-18  Score=115.88  Aligned_cols=110  Identities=17%  Similarity=0.317  Sum_probs=79.7

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .++++|+.|.|+|+++|++||+++||++.....    ..+  .++..+.                  +..+++...  ..
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~--~~~~~~~------------------~~~l~~~~~--~~   55 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPF--AVVKLDN------------------GVSLDFAQP--DG   55 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCE--EEEEcCC------------------CcEEEEecC--CC
Confidence            468999999999999999999999999987632    112  1122111                  334555321  10


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCCCC--------ccceEEEEECCCCCEEEEEec
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG--------KLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~--------~~~~~~~~~DPdG~~iel~~~  160 (170)
                      .              .+..|++|.++  |+++++++++++|+++...|...        ..++.+||+|||||.|||++.
T Consensus        56 ~--------------~~~~h~a~~v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          56 E--------------IPPQHYAFLVSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             C--------------CCcceEEEEeCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            0              13469999887  69999999999999987665321        234689999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=2.6e-18  Score=115.44  Aligned_cols=115  Identities=19%  Similarity=0.211  Sum_probs=77.4

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC-CCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG-TES   91 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~-~~~   91 (170)
                      ++.|+.|.|+|+++|++||+++||+++.....    .. ..+ ..                    +..+.+..... ...
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~-~~~-~~--------------------~~~l~~~~~~~~~~~   55 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG----EN-VTF-EG--------------------GFALQEGYSWLEGIS   55 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC----ce-EEE-ec--------------------cceeccchhhhccCC
Confidence            78999999999999999999999999865321    11 111 11                    11111100000 000


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCC-eEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV-EFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~-~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                      ...   ..    ...+..|++|.|+|+++++++|+++|+ ++..+|...+++ +.+||+|||||+|||.+.
T Consensus        56 ~~~---~~----~~~~~~~l~~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          56 KAD---II----EKSNNFELYFEEEDFDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             ccc---cc----ccCCceEEEEEehhhHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            000   00    112447999999999999999999985 777777665554 689999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.80  E-value=3.5e-18  Score=120.02  Aligned_cols=120  Identities=19%  Similarity=0.282  Sum_probs=83.6

Q ss_pred             CCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecC---CcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEe
Q 030857            9 CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP---EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH   85 (170)
Q Consensus         9 ~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~   85 (170)
                      |...+++|++|.|+|++++++||+++||+++.......   +......++..++.                 ...+.+..
T Consensus         5 ~~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~i~~~~   67 (154)
T cd07237           5 TGDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR-----------------HHSLALAE   67 (154)
T ss_pred             cCCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC-----------------CCCEEEEc
Confidence            34568999999999999999999999999987653221   11233445443211                 22344421


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHH---HHHHHHHhcCCeEeecCCCCc--cceEEEEECCCCCEEEEEec
Q 030857           86 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~---~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iel~~~  160 (170)
                      .  .              ...++.|++|.|+|++   +++++|+++|+++...+....  ..+.+|++||||+.|||...
T Consensus        68 ~--~--------------~~~g~~Hiaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          68 G--P--------------GPKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             C--C--------------CCceeEEEEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            1  1              0127789999998755   589999999999887653222  23579999999999999865


Q ss_pred             C
Q 030857          161 K  161 (170)
Q Consensus       161 ~  161 (170)
                      .
T Consensus       132 ~  132 (154)
T cd07237         132 G  132 (154)
T ss_pred             c
Confidence            4

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=2.4e-18  Score=113.31  Aligned_cols=114  Identities=25%  Similarity=0.312  Sum_probs=81.1

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   93 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   93 (170)
                      ++|++|.|.|++++++||+++||+++..+...+.   ...++..++                  ...+++......... 
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~------------------~~~i~l~~~~~~~~~-   58 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF---PGAWLYAGD------------------GPQLHLIEEDPPDAL-   58 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC---CceEEEeCC------------------CcEEEEEecCCCccc-
Confidence            5899999999999999999999999876533221   122333221                  235677543322110 


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEE
Q 030857           94 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  157 (170)
Q Consensus        94 ~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel  157 (170)
                              .....+..|++|.|+|+++++++++++|+++...+......+.+|++||||+.|||
T Consensus        59 --------~~~~~~~~~~~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          59 --------PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             --------cCCCcccceEEEEeCCHHHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence                    01123567999999999999999999999988776543334578999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.80  E-value=4.2e-18  Score=114.62  Aligned_cols=122  Identities=21%  Similarity=0.275  Sum_probs=83.1

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCc-ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      +++|++|.|.|++++++||+++|||++..+....+. .....++.....               .++..++|+.......
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~~   65 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLG---------------SPGTLLTFFEWPDAGP   65 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCC---------------CCCCEEEEEecCCCCC
Confidence            478999999999999999999999999877543221 112233322100               0145677765432211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEE
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  158 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  158 (170)
                      .        ......+..|++|.|+   ++++++++++++|+++...+.. ..++.+||+|||||+|||+
T Consensus        66 ~--------~~~~~~~~~hi~f~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          66 K--------GRRGPGQIHHIAFSVPSEASLDAWRERLRAAGVPVSGVVDH-FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             C--------CCCCCCcEEEEEEEcCCHHHHHHHHHHHHHcCCcccceEee-cceEEEEEECCCCCEEEeC
Confidence            0        0112236789999998   5799999999999998754432 2346789999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.79  E-value=6.4e-18  Score=116.63  Aligned_cols=115  Identities=18%  Similarity=0.289  Sum_probs=82.4

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++||+++..+.   +   ..+++..+                   +..+.+......+ 
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~---~---~~~~~~~~-------------------g~~l~l~~~~~~~-   56 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEKVLGAKLLVKG---R---KTAYFDLN-------------------GLWIALNEEKDIP-   56 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHhccCCEEEeec---C---eeEEEecC-------------------CeEEEeeccCCCC-
Confidence            47899999999999999999999999987542   1   12333321                   2345443211110 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCCC-CccceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                              .. ....++.|++|.++  |+++++++++++|+++...+.. ...++.+||+|||||+|||.+..
T Consensus        57 --------~~-~~~~~~~hiaf~v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         57 --------RN-EIHQSYTHIAFSIEEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             --------Cc-cCCCCeeEEEEEecHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeCC
Confidence                    00 11236789999998  9999999999999998765533 23456899999999999998754

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.79  E-value=6.5e-18  Score=113.80  Aligned_cols=113  Identities=23%  Similarity=0.284  Sum_probs=79.4

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|+++|++||+++|||++.....  +.   ..++...+.               .....+.+.  ...  
T Consensus         3 ~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~---~~~~~~~~~---------------~~~~~~~l~--~~~--   58 (122)
T cd07265           3 LRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG---RVYLKAWDE---------------FDHHSIVLR--EAD--   58 (122)
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc---eEEEEccCC---------------CcccEEEec--cCC--
Confidence            589999999999999999999999999876532  11   122322110               002233331  111  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCC-C-ccceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG-G-KLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~-~-~~~~~~~~~DPdG~~iel~~~~  161 (170)
                                   ..++.|++|.|+   |+++++++++++|+++...|.. . ..++.+||+|||||.|||....
T Consensus        59 -------------~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          59 -------------TAGLDFMGFKVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             -------------CCCeeEEEEEeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence                         115689999997   7999999999999998765532 2 2245799999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.79  E-value=7.8e-18  Score=119.08  Aligned_cols=116  Identities=19%  Similarity=0.284  Sum_probs=77.9

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      ++++|++|.|+|+++|++||+++|||++..............++...+.                 ...+.+..  ..  
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~i~l~~--~~--   60 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG-----------------VHDTALTG--GN--   60 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC-----------------cceEEEec--CC--
Confidence            4899999999999999999999999998754332222223344432211                 12333321  11  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEe--ecCCC-Cc-cceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFA--KKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~--~~~~~-~~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                                   ..++.|++|.|+|   +++++++|+++|++..  ..|.. +. ..+++||+|||||.|||++..
T Consensus        61 -------------~~~~~Hiaf~v~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          61 -------------GPRLHHVAFWVPEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             -------------CCceeEEEEEcCCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence                         1167899999985   7888899999998632  23321 11 234689999999999998644

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.79  E-value=6.2e-18  Score=115.62  Aligned_cols=118  Identities=16%  Similarity=0.156  Sum_probs=80.1

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcce-EEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .+++|++|.|+|++++++||+++||+.+..+........ ...++..                   +...+++...  ..
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~i~l~~~--~~   61 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLI-------------------GGLWIAIMEG--DS   61 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEc-------------------CCeEEEEecC--CC
Confidence            379999999999999999999999998766532110000 0011111                   1235555421  11


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCC-CCccceEEEEECCCCCEEEEEecCc
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      .            ...+..|++|.|+  ++++++++|+++|+++..... ....++.+||+|||||.|||.....
T Consensus        62 ~------------~~~~~~Hiaf~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~~~  124 (131)
T cd08364          62 L------------QERTYNHIAFKISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTGTL  124 (131)
T ss_pred             C------------CCCCceEEEEEcCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecCCH
Confidence            0            0125689999998  799999999999998765432 1223568999999999999987643

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.79  E-value=8.6e-18  Score=118.39  Aligned_cols=119  Identities=16%  Similarity=0.166  Sum_probs=83.4

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +++|++|.|+|++++++||+++|||++..+..   ..  ..+...+..                .+..+.+........ 
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~~--~~~~~~~~~----------------~~~~l~l~~~~~~~~-   58 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---DR--VRLEEGGGG----------------PGAVVDVLEEPDQPR-   58 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---CE--EEEEecCCC----------------CCCEEEEEeCCCCCC-
Confidence            47999999999999999999999999987632   11  222222100                145777765321110 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                           .   .....++.|++|.|+|   +++++++|+++|+.+.. +....+++.+||+|||||.|||.....
T Consensus        59 -----~---~~~~~~l~Hiaf~v~d~~dvd~~~~~L~~~Gv~~~~-~~~~~~~~s~yf~DPdG~~iEl~~~~~  122 (157)
T cd08347          59 -----G---RPGAGTVHHVAFRVPDDEELEAWKERLEALGLPVSG-IVDRFYFKSLYFREPGGILFEIATDGP  122 (157)
T ss_pred             -----C---cccCCceEEEEEECCCHHHHHHHHHHHHHCCCCccc-ccccccEEEEEEECCCCcEEEEEECCC
Confidence                 0   0112367899999998   99999999999997543 333233467899999999999998653

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=3.2e-17  Score=110.33  Aligned_cols=119  Identities=14%  Similarity=0.163  Sum_probs=81.9

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 030857           16 FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   95 (170)
Q Consensus        16 hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   95 (170)
                      ...|.|+|++++++||+++||+++.......+..+....+..+                   ...+.+..........  
T Consensus         2 ~p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~l~~~~~~~~~~--   60 (122)
T cd08355           2 WPTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG-------------------DGGVMVGSVRDDYRAS--   60 (122)
T ss_pred             eEEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC-------------------CEEEEEecCCCccccc--
Confidence            3578999999999999999999998765433333333334332                   2344443322111100  


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEe
Q 030857           96 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        96 ~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  159 (170)
                        .  ......+..|++|.|+|+++++++++++|+++..+|...+++ +.++++|||||+|+|.+
T Consensus        61 --~--~~~~~~~~~~~~~~v~d~d~~~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          61 --S--ARAGGAGTQGVYVVVDDVDAHYERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             --c--cccCCCceEEEEEEECCHHHHHHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEec
Confidence              0  001112457999999999999999999999999887655554 57889999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=2.2e-17  Score=111.30  Aligned_cols=122  Identities=20%  Similarity=0.285  Sum_probs=77.8

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC--C
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE--S   91 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~--~   91 (170)
                      +.|+.|.|+|++++.+||+++|||++.....  ...+..  +..+                   ...+.+.......  .
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~--~~~~-------------------~~~~~~~~~~~~~~~~   57 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYGE--LETG-------------------ETTLAFASHDLAESNL   57 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEEE--ecCC-------------------cEEEEEEccccccccc
Confidence            4699999999999999999999999865422  112211  1110                   1222222111000  0


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                      .....+ ......+ +..|++|.|+|+++++++++++|+++..++...+++ +.++++|||||.|||+++
T Consensus        58 ~~~~~~-~~~~~~~-~~~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          58 KGGFVK-ADPAQPP-AGFEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             ccCccC-CccccCC-CcEEEEEEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            000000 0000111 335999999999999999999999998877555444 478899999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=2.2e-17  Score=111.34  Aligned_cols=118  Identities=23%  Similarity=0.356  Sum_probs=83.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      ++++|+.|.|.|++++++||+++|||++....   + .  .+++..++.                 ...+.+........
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~-~--~~~l~~~~~-----------------~~~l~l~~~~~~~~   57 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERT---D-S--TAVLGTGGK-----------------RPLLVLEEDPDAPP   57 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C-C--EEEEecCCC-----------------eEEEEEEeCCCCCc
Confidence            37999999999999999999999999998762   1 1  233433210                 24566644322110


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                       .        .....+..|++|.|+   ++++++++++++|+++.... ....++.+|++|||||+|||....+
T Consensus        58 -~--------~~~~~~~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~-~~~~~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          58 -A--------PPGATGLYHFAILLPSRADLAAALRRLIELGIPLVGAS-DHLVSEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             -c--------cCCCCcEEEEEEECCCHHHHHHHHHHHHHcCCceeccc-cccceeEEEEECCCCCEEEEEEecC
Confidence             0        011236789999997   49999999999999875433 3333457899999999999987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.78  E-value=2.5e-17  Score=112.95  Aligned_cols=115  Identities=17%  Similarity=0.199  Sum_probs=81.0

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +++|++|.|+|+++|++||+++||+++.....  .   ...|+..++..               ....+.+...  +.  
T Consensus         3 ~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~---------------~~~~i~l~~~--~~--   58 (134)
T cd08360           3 RLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGG---------------DHHNLFLIKT--PA--   58 (134)
T ss_pred             eeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCC---------------CCcEEEEecC--CC--
Confidence            79999999999999999999999999876532  1   23444432100               1235555321  10  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHH---HHHHhcCCeEeecCCCCcc--ceEEEEECCCCCEEEEEecCc
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~---~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~  162 (170)
                                 ...+++|++|.|+|++++.   ++|+++|+++...+...+.  .+++||+||+|+.|||.....
T Consensus        59 -----------~~~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          59 -----------PMAGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             -----------CCCcceEEEEEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence                       0137899999999888776   5999999998765533222  346899999999999996543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.78  E-value=4.5e-18  Score=116.30  Aligned_cols=116  Identities=19%  Similarity=0.251  Sum_probs=81.6

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   93 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   93 (170)
                      ++||+|.|+|++++++||+++||+++....   + .  ..++..+                   +..+++......+.  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~---~-~--~~~~~~~-------------------~~~l~l~~~~~~~~--   53 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLG---E-K--TAYFTIG-------------------GTWLALNEEPDIPR--   53 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccC---C-c--cceEeeC-------------------ceEEEEEccCCCCc--
Confidence            589999999999999999999999986532   1 1  1223321                   23455533221100  


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCC--HHHHHHHHHhcCCeEeecCCC-CccceEEEEECCCCCEEEEEecCccc
Q 030857           94 DFKGYHNGNSEPRGFGHIGITVDD--VYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLKTIG  164 (170)
Q Consensus        94 ~~~~~~~~~~~~~g~~hl~f~v~d--i~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~DPdG~~iel~~~~~~~  164 (170)
                              .....+..|++|.|++  +++++++++++|+++...+.. ...++.+||+|||||+|||.+.....
T Consensus        54 --------~~~~~~~~hiaf~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~~~~  119 (131)
T cd08363          54 --------NEIRQSYTHIAFTIEDSEFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGTLAE  119 (131)
T ss_pred             --------CCcCccceEEEEEecHHHHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecCcHHH
Confidence                    0112367899999984  999999999999998765432 23456899999999999999876544

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.78  E-value=6.3e-18  Score=114.17  Aligned_cols=123  Identities=24%  Similarity=0.353  Sum_probs=85.4

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecC-CcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      ++|++|.|+|++++.+||+++||+++....... +.....+++..+                   +..+++.........
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~~   61 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG-------------------NVQIELIEPLDDDSP   61 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC-------------------CEEEEEEEECCCCCc
Confidence            579999999999999999999999998765432 223445555532                   467888764332111


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCC-CCccceEEEEECCC---CCEEEEEe
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPD---DYWIEIFD  159 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPd---G~~iel~~  159 (170)
                      ..  .+ . .....+..|++|.|+|+++++++++++|+++...+. ....++.+++.||+   |++|||+|
T Consensus        62 ~~--~~-~-~~~~~g~~h~~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          62 IA--KF-L-EKRGEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             HH--HH-H-hcCCCceEEEEEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            00  00 0 012247789999999999999999999999988775 33344445445555   99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PRK06724 hypothetical protein; Provisional

Probab=99.78  E-value=1.7e-17  Score=113.14  Aligned_cols=111  Identities=17%  Similarity=0.181  Sum_probs=74.7

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhc---CCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVL---GMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      +..+++|++|.|+|+++|++||+++|   |++......         +..                    +...+.+.. 
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~---------~~~--------------------g~~~l~l~~-   53 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVA---------YST--------------------GESEIYFKE-   53 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEe---------eeC--------------------CCeeEEEec-
Confidence            44589999999999999999999976   555432111         100                    011232211 


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCeEeecCCCC---ccc-eEEEEECCCCCEEEEEe
Q 030857           87 WGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGG---KLK-GVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~---~~~-~~~~~~DPdG~~iel~~  159 (170)
                      ....       ..    ...+..|+||.|   +++++++++|+++|+++...|...   ..+ +.+||+|||||.|||..
T Consensus        54 ~~~~-------~~----~~~g~~h~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~  122 (128)
T PRK06724         54 VDEE-------IV----RTLGPRHICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAY  122 (128)
T ss_pred             CCcc-------cc----CCCCceeEEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEe
Confidence            1110       00    012568999998   689999999999999987666431   123 57889999999999986


Q ss_pred             cC
Q 030857          160 LK  161 (170)
Q Consensus       160 ~~  161 (170)
                      ..
T Consensus       123 ~~  124 (128)
T PRK06724        123 TP  124 (128)
T ss_pred             CC
Confidence            63

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.78  E-value=2.7e-17  Score=112.26  Aligned_cols=114  Identities=21%  Similarity=0.356  Sum_probs=82.3

Q ss_pred             eEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 030857           15 HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   94 (170)
Q Consensus        15 ~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   94 (170)
                      +|++|.|+|++++++||+++||+++......+ .....+++..++.                 ...+.+...  ..    
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~-----------------~~~l~~~~~--~~----   56 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED-----------------HHDLALFPG--PE----   56 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC-----------------cceEEEEcC--CC----
Confidence            59999999999999999999999987664433 2234555554321                 234555321  10    


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCCHH---HHHHHHHhcCCeEeecCCCCc--cceEEEEECCCCCEEEEEecCc
Q 030857           95 FKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        95 ~~~~~~~~~~~~g~~hl~f~v~di~---~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~~  162 (170)
                                ..++.|++|.|+|++   +++++++++|+++...+....  ..+.+||+|||||.|||.+...
T Consensus        57 ----------~~~~~hl~~~v~d~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          57 ----------RPGLHHVAFEVESLDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             ----------CCCeeEEEEEcCCHHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence                      126789999999864   788999999999987664322  2357899999999999997654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=2.5e-17  Score=110.57  Aligned_cols=118  Identities=23%  Similarity=0.347  Sum_probs=82.0

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++||++........  .+  ..+..+                   ...+++........
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~--~~~~~~-------------------~~~~~l~~~~~~~~   58 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GR--KALRFG-------------------SQKINLHPVGGEFE   58 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccC--Cc--eEEEeC-------------------CEEEEEecCCCccC
Confidence            36899999999999999999999999998763321  11  122221                   23566644222110


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC-HHHHHHHHHhcCCeEeecCCC--C--ccceEEEEECCCCCEEEEEe
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDD-VYKACERFERLGVEFAKKPDG--G--KLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~d-i~~~~~~l~~~G~~~~~~~~~--~--~~~~~~~~~DPdG~~iel~~  159 (170)
                       +.      ......+..|++|.+++ +++++++++++|+++...|..  +  ..++.+||+|||||+||+.+
T Consensus        59 -~~------~~~~~~~~~hi~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          59 -PA------AGSPGPGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             -cC------ccCCCCCCceEEEEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence             00      01122367899999975 999999999999998866532  1  12457899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.77  E-value=1.5e-17  Score=111.84  Aligned_cols=111  Identities=18%  Similarity=0.217  Sum_probs=78.0

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++.+||+++|||++..+..    .  ..++...+..               ....+.+...  .  
T Consensus         5 ~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~--~~~l~~~~~~---------------~~~~~~l~~~--~--   59 (121)
T cd09013           5 AHLAHVELLTPKPEESLWFFTDVLGLEETGREG----Q--SVYLRAWGDY---------------EHHSLKLTES--P--   59 (121)
T ss_pred             cEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----C--eEEEEeccCC---------------CccEEEEeeC--C--
Confidence            489999999999999999999999999877532    1  2333321100               0234444211  1  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                                   ..+..|++|.|+   ++++++++++++|+++...+.....+..+||+|||||.|||.-.
T Consensus        60 -------------~~~~~h~af~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          60 -------------EAGLGHIAWRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             -------------CCceEEEEEEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEe
Confidence                         126789999997   58899999999999875433222334578999999999999853

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.77  E-value=3.2e-17  Score=116.52  Aligned_cols=118  Identities=17%  Similarity=0.261  Sum_probs=80.6

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|++|.|+|++++++||+++|||++..............|+.....                 ...+.+.  .... 
T Consensus         5 ~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~i~l~--~~~~-   64 (166)
T cd09014           5 RRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNK-----------------VHDVAYT--RDPA-   64 (166)
T ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCC-----------------ceeEEEe--cCCC-
Confidence            4799999999999999999999999998766433322222344433210                 1223331  1110 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCcc--ceEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~  160 (170)
                                 ....++.|+||.|+|   +++++++|+++|+++...|.....  ..++|++|||||+|||++.
T Consensus        65 -----------~~~~~~~hiaf~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          65 -----------GARGRLHHLAYALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             -----------CCCCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence                       011257899999985   557889999999998765533222  2368899999999999987

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=4.6e-17  Score=110.29  Aligned_cols=118  Identities=19%  Similarity=0.288  Sum_probs=83.6

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhc---CCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVL---GMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      +++|+.|.|+|++++.+||+++|   ||++.....  . .  ..|....                  ++..+++......
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~-~--~~~~~~~------------------~~~~i~l~~~~~~   57 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D-G--RSWRAGD------------------GGTYLVLQQADGE   57 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c-C--ceEEecC------------------CceEEEEEecccC
Confidence            57999999999999999999999   999987642  1 1  1122111                  1457777654322


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCC----CccceEEEEECCCCCEEEEEec
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      .. ..+      .....++.|++|.|+   |+++++++++++|+++...+..    ...++.+|++|||||+|||+.+
T Consensus        58 ~~-~~~------~~~~~g~~hia~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          58 SA-GRH------DRRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             CC-ccc------ccCCcCeeEEEEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            11 101      011236789999997   4899999999999999887643    2234588999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=3.6e-17  Score=109.47  Aligned_cols=116  Identities=17%  Similarity=0.188  Sum_probs=78.4

Q ss_pred             eEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 030857           15 HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   94 (170)
Q Consensus        15 ~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   94 (170)
                      .++.|.|+|+++|++||+++|||++....   + .  ...+..++                 +...+.+...... ..+ 
T Consensus         3 ~~~~l~v~D~~~s~~FY~~~lG~~~~~~~---~-~--~~~~~~~~-----------------~~~~l~l~~~~~~-~~~-   57 (119)
T cd08359           3 LYPVIVTDDLAETADFYVRHFGFTVVFDS---D-W--YVSLRSPD-----------------GGVELAFMLPGHE-TVP-   57 (119)
T ss_pred             ceeEEEECCHHHHHHHHHHhhCcEEEecc---C-c--EEEEecCC-----------------CceEEEEccCCCC-CCc-
Confidence            46889999999999999999999988652   1 1  22232211                 0134444322111 000 


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEe
Q 030857           95 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        95 ~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  159 (170)
                      .  .. .... ....|++|.|+|+++++++++++|+++..+|...+++ +.++++|||||+|||+|
T Consensus        58 ~--~~-~~~~-~~~~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          58 A--AQ-YQFQ-GQGLILNFEVDDVDAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             c--hh-cccC-CceEEEEEEECCHHHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            0  00 0111 1224999999999999999999999988777655544 68899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.77  E-value=3.4e-17  Score=110.18  Aligned_cols=110  Identities=20%  Similarity=0.232  Sum_probs=77.8

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      ++.|++|.|+|+++|++||+++|||++..+.   ..  ...++..++.                 +..+.+..  .+.  
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~---~~--~~~~~~~~~~-----------------~~~~~l~~--~~~--   55 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRP---ED--GALYLRMDDR-----------------AWRIAVHP--GEA--   55 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCC---CC--CeEEEEccCC-----------------ceEEEEEe--CCC--
Confidence            6899999999999999999999999986542   11  1233332211                 23444421  110  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCC----CCccceEEEEECCCCCEEEEEecC
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD----GGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~----~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                                   .++.|++|.++   |+++++++|+++|+++...+.    ....++.+||+|||||.|||+...
T Consensus        56 -------------~~~~~~~f~v~~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          56 -------------DDLAYAGWEVADEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             -------------CceeEEEEEECCHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence                         15579999997   499999999999999986542    112235789999999999998643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=6.4e-17  Score=107.28  Aligned_cols=108  Identities=21%  Similarity=0.337  Sum_probs=76.6

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 030857           16 FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   95 (170)
Q Consensus        16 hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   95 (170)
                      +..|.|+|++++++||+++|||++...   .  .. ..++.....                ....+.+......      
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~---~--~~-~~~~~~~~~----------------~~~~~~~~~~~~~------   54 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMD---H--GW-IATFASPQN----------------MTVQVSLATEGGT------   54 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEc---C--Cc-eEEEeecCC----------------CCcEEEEecCCCC------
Confidence            457899999999999999999998643   1  11 222222110                1234555321110      


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857           96 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        96 ~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                               .....|++|.|+|+++++++|+++|+++..++....++ +.+|+.|||||.|+|.++
T Consensus        55 ---------~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          55 ---------ATVVPDLSIEVDDVDAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             ---------CCCCCEEEEEeCCHHHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence                     01336999999999999999999999998877554444 578999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.76  E-value=5.5e-17  Score=112.71  Aligned_cols=111  Identities=18%  Similarity=0.315  Sum_probs=79.5

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++.....  +   ...|+..+..                 ...+.+...  .  
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~-----------------~~~~~l~~~--~--   56 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSD-----------------HHSIAIARG--P--   56 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCC-----------------cceEEEccC--C--
Confidence            389999999999999999999999999865421  1   2344443221                 234444211  1  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHH---HHHHhcCCeEeecCCC-Ccc-ceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDG-GKL-KGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~---~~l~~~G~~~~~~~~~-~~~-~~~~~~~DPdG~~iel~~~~  161 (170)
                                   ..++.|++|.|+|++++.   ++|+++|+++...+.. +.. .+++||+||+||.|||++..
T Consensus        57 -------------~~~~~hiaf~v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          57 -------------HPSLNHVAFEMPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             -------------CCceEEEEEECCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence                         025689999999877775   8999999998766532 222 34688999999999999864

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=1.5e-16  Score=106.62  Aligned_cols=116  Identities=17%  Similarity=0.155  Sum_probs=82.3

Q ss_pred             EEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 030857           17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   96 (170)
Q Consensus        17 v~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   96 (170)
                      +.|.|+|++++.+||+++||+........++..+....+..+                   +..+.+.... +. .. . 
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~l~~~~-~~-~~-~-   61 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG-------------------DSVLMLADEF-PE-HG-S-   61 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC-------------------CEEEEEecCC-cc-cC-C-
Confidence            568999999999999999999998876544444444444432                   2355554321 11 00 0 


Q ss_pred             CCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEe
Q 030857           97 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        97 ~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  159 (170)
                         .. ....+..|++|.|+|++++++++.+.|+++..++...+++ +.++++|||||.|+|.+
T Consensus        62 ---~~-~~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          62 ---PA-SWGGTPVSLHLYVEDVDATFARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             ---CC-CCCCceEEEEEEeCCHHHHHHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence               00 0112457999999999999999999999998887544443 58899999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.76  E-value=9.9e-17  Score=109.64  Aligned_cols=119  Identities=24%  Similarity=0.361  Sum_probs=82.9

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +++|+.|.|+|++++++||+++||+++......    ....++..+..                ....+.+........ 
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~----------------~~~~l~l~~~~~~~~-   59 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPD----------------EHHQIALITGRPAAP-   59 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCC----------------CceEEEEEecCCCCC-
Confidence            589999999999999999999999998765321    12334433200                134566654322210 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHH---HHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~di~---~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                               .....++.|++|.|+|++   ++++++.++|+++...+..+ .++.+|++|||||.|||+...+
T Consensus        60 ---------~~~~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          60 ---------PPGPAGLNHIAFEVDSLDDLRDLYERLRAAGITPVWPVDHG-NAWSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             ---------CCCCCCceEEEEEeCCHHHHHHHHHHHHHCCCCccccCCCC-ceeEEEEECCCCCEEEEEEcCC
Confidence                     011236789999998755   58899999999887655332 2467899999999999997654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.76  E-value=3.4e-18  Score=115.05  Aligned_cols=121  Identities=28%  Similarity=0.370  Sum_probs=80.3

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeec--CCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDF--PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      +++|++|.|+|++++++||+++|||++......  ........++..+                   ...+++.....+.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~   61 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIG-------------------EGHIELFLNPSPP   61 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEEST-------------------SSCEEEEEEESSS
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccc-------------------ccceeeeeecccc
Confidence            689999999999999999999999999998652  2223344444432                   3456665543332


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccc--eEEEEECCCCCEEEE
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK--GVAFIKDPDDYWIEI  157 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~--~~~~~~DPdG~~iel  157 (170)
                      ......... .    .+..|+++.+.   |+++++++|++.|+++...+.....+  ..+|++|||||.|||
T Consensus        62 ~~~~~~~~~-~----~~~~~i~~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   62 PRASGHSFP-E----HGGHHIAFLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             SSSEEEHHH-S----HTSEEEEEEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             ccccccccc-c----ccceeEEEEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            211100000 0    02346666665   78889999999999999877432222  235799999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=9.3e-17  Score=107.69  Aligned_cols=120  Identities=18%  Similarity=0.248  Sum_probs=80.6

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   93 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   93 (170)
                      +.|+.|.|.|++++++||+++|||++..+   ++..  .+++..++                  ...+.++.........
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~--~~~l~~~~------------------~~~~~l~~~~~~~~~~   57 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRR--LAFFWVGG------------------RGMLLLFDPGATSTPG   57 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCc--eEEEEcCC------------------CcEEEEEecCCccccc
Confidence            46899999999999999999999999874   1222  23343322                  2344444322111000


Q ss_pred             CCCCCCCCCCCCCCceEEEEEe--CCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           94 DFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        94 ~~~~~~~~~~~~~g~~hl~f~v--~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      ..  ..  .....+..|++|.+  +|++++++++.++|+++...+.....++.+|++|||||+|||+++
T Consensus        58 ~~--~~--~~~~~~~~~~~~~v~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          58 GE--IP--PHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             CC--CC--CCCCCCccEEEEEcCHHHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            00  00  01123678999999  489999999999999887655433345679999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.75  E-value=5.9e-17  Score=107.90  Aligned_cols=110  Identities=25%  Similarity=0.397  Sum_probs=81.0

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      ++++|+.|.|+|++++++||+++||+++.....      ...++..+..                +...+.+...  +. 
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~----------------~~~~~~~~~~--~~-   55 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSED----------------DHHSLVLTEG--DE-   55 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCC----------------CcEEEEEEeC--CC-
Confidence            479999999999999999999999999987631      1234443210                1234444321  10 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCc-cceEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~  160 (170)
                                    .+..|++|.|+   ++++++++++++|+++...+...+ .++.+|++||+||.||++..
T Consensus        56 --------------~~~~h~~~~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          56 --------------PGVDALGFEVASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             --------------CCceeEEEEcCCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence                          15689999997   689999999999999988764333 34678999999999999854

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=3.5e-17  Score=110.56  Aligned_cols=120  Identities=17%  Similarity=0.119  Sum_probs=78.0

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   93 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   93 (170)
                      +.+++|.|+|+++|++||++ |||+.........  . ..+.. ++                  ...+.+........  
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~-~~~~~-~~------------------~~~l~l~~~~~~~~--   55 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK--A-ACMVI-SD------------------NIFVMLLTEDFFQT--   55 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC--e-EEEEE-CC------------------ceEEEEEcHHHHhh--
Confidence            36899999999999999976 8999875432221  1 11111 11                  23555543211000  


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEe
Q 030857           94 DFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        94 ~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  159 (170)
                       +...........+..|++|.|+   ++++++++++++|+++..+|...++++.+||+|||||+|||+.
T Consensus        56 -~~~~~~~~~~~~~~~~l~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          56 -FTPKPIADTKKSTEVLISLSADSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             -ccCCCcccCCCCCeEEEEEeCCCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence             0000000011224569999998   5889999999999999887766555567899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.75  E-value=7.4e-17  Score=109.22  Aligned_cols=109  Identities=17%  Similarity=0.236  Sum_probs=77.9

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .++.|+.|.|+|+++|.+||+++|||++..+.   +   ...+++.+..                 +..+.+...  .  
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~---~---~~~~l~~~~~-----------------~~~i~l~~~--~--   57 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAERT---A---KATYFRSDAR-----------------DHTLVYIEG--D--   57 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccCC---C---CeEEEEcCCc-----------------cEEEEEEeC--C--
Confidence            47999999999999999999999999986542   1   1234443211                 233444211  1  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCC----CccceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                                    .+..|++|.|+|   +++++++++++|+++...+..    ...++.+||+|||||.||+....
T Consensus        58 --------------~~~~~iaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          58 --------------PAEQASGFELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             --------------CceEEEEEEECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence                          134799999985   999999999999998765421    11234678999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.75  E-value=3.4e-17  Score=110.26  Aligned_cols=114  Identities=19%  Similarity=0.256  Sum_probs=79.7

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +++|+.|.|+|++++.+||+++||+++.....  +    ..++..+                   +..+.+.......  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~-------------------~~~~~l~~~~~~~--   53 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAG-------------------DLWLCLSVDANVG--   53 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecC-------------------CEEEEEecCCCCC--
Confidence            47899999999999999999999999876532  1    1222221                   1233332211110  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEe--CCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCccccc
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI  166 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v--~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  166 (170)
                                 ...+..|++|.+  +|+++++++++++|+++...+...  ++.+||+|||||.|||.+..-...+
T Consensus        54 -----------~~~~~~hi~f~v~~~dl~~~~~~l~~~G~~~~~~~~~~--~~~~~f~DPdG~~ie~~~~~~~~~~  116 (121)
T cd07244          54 -----------PAKDYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSE--GDSFYFLDPDGHKLELHVGSLASRL  116 (121)
T ss_pred             -----------CCCCeeeEEEEeCHHHHHHHHHHHHHcCCcccCCCCCC--ccEEEEECCCCCEEEEEeCCHHHHH
Confidence                       012567999999  479999999999999887655332  3568999999999999987644433

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.74  E-value=1.4e-16  Score=106.10  Aligned_cols=109  Identities=12%  Similarity=0.070  Sum_probs=75.7

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|+++|++||++ |||++..+.   +.   ..++..++.                 ...+.+.. ...  
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~---~~---~~~~~~~~~-----------------~~~~~~~~-~~~--   54 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAART---DD---ELYYRGYGT-----------------DPFVYVAR-KGE--   54 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEec---CC---eEEEecCCC-----------------ccEEEEcc-cCC--
Confidence            3789999999999999999999 999986552   11   223332110                 11222211 110  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                                   ..++.|++|.|+|.+++.+.+++.|+.....+.....++.+||+|||||.|||+--
T Consensus        55 -------------~~~~~~~af~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          55 -------------KARFVGAAFEAASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             -------------cCcccEEEEEECCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEec
Confidence                         12567999999999999999999999877544311224578999999999999743

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PLN02300 lactoylglutathione lyase

Probab=99.74  E-value=2.2e-16  Score=121.38  Aligned_cols=128  Identities=30%  Similarity=0.514  Sum_probs=94.1

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      -++.|+.|.|+|++++.+||+++||+++......++..+...++..+...               ....+++....+...
T Consensus       153 ~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~lel~~~~~~~~  217 (286)
T PLN02300        153 EPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPED---------------KTTVLELTYNYGVTE  217 (286)
T ss_pred             CcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCC---------------CccEEEEeecCCCCc
Confidence            37899999999999999999999999998754444445666665532210               123566654322211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCcc--ceEEEEECCCCCEEEEEecCccc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKTIG  164 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~  164 (170)
                            +..+    .+++|++|.|+|+++++++++++|+++..+|...+.  ++.++|+||||+.|+|++...+-
T Consensus       218 ------~~~g----~~~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~  282 (286)
T PLN02300        218 ------YTKG----NAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFL  282 (286)
T ss_pred             ------cccC----CceeEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhh
Confidence                  1112    367899999999999999999999999987754332  35788999999999999987643

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.73  E-value=2e-16  Score=122.34  Aligned_cols=116  Identities=20%  Similarity=0.292  Sum_probs=79.4

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcce-EEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ..+++||+|.|+|++++++||+++|||++..+...+.... ...|+..+..                 ...+.+...  +
T Consensus       143 ~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~--~  203 (303)
T TIGR03211       143 ARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK-----------------AHDIAFVGD--P  203 (303)
T ss_pred             ceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC-----------------CcccceecC--C
Confidence            3579999999999999999999999999876543332221 2334432110                 111222110  0


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCc--cceEEEEECCCCCEEEEEe
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iel~~  159 (170)
                                    ..+.++|+||.|+|   +++++++|+++|+++...|....  .++++||+|||||+|||..
T Consensus       204 --------------~~g~~~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       204 --------------EPGKLHHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             --------------CCCceEEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence                          01237899999996   55578899999999887664322  2458999999999999983

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.73  E-value=2e-16  Score=105.94  Aligned_cols=110  Identities=17%  Similarity=0.179  Sum_probs=77.4

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +++|+.|.|+|++++++||+++|||+......    .  ..++.....                ....+.+.   ...  
T Consensus         3 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~~----------------~~~~~~~~---~~~--   55 (120)
T cd08362           3 ALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----G--IVYLRATGS----------------EHHILRLR---RSD--   55 (120)
T ss_pred             eeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----C--EEEEECCCC----------------ccEEEEec---cCC--
Confidence            78999999999999999999999999875421    1  223332110                01223331   110  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCeEeecCC--CCc-cceEEEEECCCCCEEEEEecC
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD--GGK-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~--~~~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                                  ..++.|++|.|   +++++++++++++|+++...+.  ..+ .++.++|+||+||.|||+...
T Consensus        56 ------------~~~~~~~~~~v~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          56 ------------RNRLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             ------------CCCCceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence                        01457999999   4799999999999999876552  222 245789999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.73  E-value=1.1e-16  Score=106.06  Aligned_cols=107  Identities=21%  Similarity=0.319  Sum_probs=74.5

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 030857           16 FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   95 (170)
Q Consensus        16 hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   95 (170)
                      |+.|.|+|++++++||+++||+++.....  .    ..++..+                   +..+.+...... .    
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~----~~~~~~~-------------------~~~l~~~~~~~~-~----   50 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K----EAYFELA-------------------GLWICLMEEDSL-Q----   50 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c----eeEEEec-------------------CeEEEeccCCCc-C----
Confidence            89999999999999999999999876531  1    1222221                   223444221110 0    


Q ss_pred             CCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCC-CCccceEEEEECCCCCEEEEEe
Q 030857           96 KGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        96 ~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPdG~~iel~~  159 (170)
                             ....+..|++|.|+  |+++++++++++|+++...+. ....++.+|++|||||+|||+.
T Consensus        51 -------~~~~~~~hiaf~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          51 -------GPERTYTHIAFQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             -------CCCCCccEEEEEcCHHHHHHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEe
Confidence                   01125689999995  799999999999999875432 2234567899999999999984

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.73  E-value=1e-16  Score=105.34  Aligned_cols=107  Identities=25%  Similarity=0.389  Sum_probs=72.6

Q ss_pred             EEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 030857           19 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   98 (170)
Q Consensus        19 i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   98 (170)
                      |.|+|++++++||+++|||++.....    .+.....+...                 ......+.......        
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~~~-----------------~~~~~~~~~~~~~~--------   51 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLGFRF-----------------HDGVIEFLQFPDPP--------   51 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEETEEE-----------------EEEEEEEEEEESSS--------
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEeccch-----------------hhhhHHHccCCccc--------
Confidence            68999999999999999999999432    12122111100                 01123333221111        


Q ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEE
Q 030857           99 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  158 (170)
Q Consensus        99 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  158 (170)
                          ....+..|++|.|+|+++++++++++|+++...|....++ +.+++.|||||+|||+
T Consensus        52 ----~~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   52 ----GPPGGGFHLCFEVEDVDALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             ----SSSSSEEEEEEEESHHHHHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             ----cCCCceeEEEEEEcCHHHHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence                1123668999999999999999999999998877554444 6899999999999985

...

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.72  E-value=1.8e-16  Score=106.54  Aligned_cols=116  Identities=20%  Similarity=0.212  Sum_probs=73.8

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC-C
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES-D   92 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~-~   92 (170)
                      ++|++|.|+|+++|++||++ |||++...... .   ..+.+..++                  +..+.+........ .
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~-~---~~~~~~~~~------------------~~~l~l~~~~~~~~~~   57 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD-E---PHVEAVLPG------------------GVRLAWDTVESIRSFT   57 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC-C---CcEEEEeCC------------------CEEEEEEcccceeeec
Confidence            58999999999999999975 99998644221 0   111122111                  12333321100000 0


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEE
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  158 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  158 (170)
                      +.   .   .....+..|++|.++   |+++++++++++|+++...|...+++ +.++|+|||||+|||.
T Consensus        58 ~~---~---~~~~~~~~~l~~~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          58 PG---W---TPTGGHRIALAFLCETPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CC---C---CCCCCCcEEEEEEcCCHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence            00   0   001123468888875   89999999999999988777655555 5789999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.72  E-value=6.1e-16  Score=102.10  Aligned_cols=108  Identities=23%  Similarity=0.293  Sum_probs=76.7

Q ss_pred             EEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 030857           18 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   97 (170)
Q Consensus        18 ~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   97 (170)
                      .|.|+|++++++||+++||+++.....  ...  ..+++.+                   +..+.+........      
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~~--~~~~~~~-------------------~~~~~l~~~~~~~~------   53 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EPG--YAFLSRG-------------------GAQLMLSEHDGDEP------   53 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CCc--EEEEEeC-------------------CEEEEEeccCCCCC------
Confidence            689999999999999999999887642  122  2333321                   35666654322211      


Q ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCe-EeecCCCCccc-eEEEEECCCCCEEEEEe
Q 030857           98 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVE-FAKKPDGGKLK-GVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        98 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~-~~~~~~~~~~~-~~~~~~DPdG~~iel~~  159 (170)
                      .     ...+..|++|.++|++++++++.++|++ +..++....++ +.+|++||+|+.|||+|
T Consensus        54 ~-----~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          54 V-----PLGRGGSVYIEVEDVDALYAELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             C-----CCCCcEEEEEEeCCHHHHHHHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            0     1124569999999999999999999998 55555443333 67899999999999976

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.72  E-value=2.6e-16  Score=105.69  Aligned_cols=111  Identities=23%  Similarity=0.265  Sum_probs=77.1

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .++.|+.|.|+|++++++||+++||+++....   + .  ..++......               ....+.+..  .+  
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~-~--~~~~~~~~~~---------------~~~~~~~~~--~~--   57 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVDVLGLVETEED---D-D--RIYLRGLEEF---------------IHHSLVLTK--AP--   57 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeccC---C-C--eEEEEecCCC---------------ceEEEEEee--CC--
Confidence            48999999999999999999999999987652   1 1  2223211100               012333321  11  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCC-CCcc-ceEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD-GGKL-KGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~-~~~~-~~~~~~~DPdG~~iel~~~  160 (170)
                                   ..+..|++|.|.   |+++++++++++|+++...|. ..+. ++.+|+.|||||.|||+..
T Consensus        58 -------------~~~~~hi~~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          58 -------------VAGLGHIAFRVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             -------------CCceeEEEEECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence                         025689999994   799999999999999876532 2222 3578999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=3.5e-16  Score=103.95  Aligned_cols=109  Identities=21%  Similarity=0.341  Sum_probs=76.8

Q ss_pred             EEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 030857           17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   96 (170)
Q Consensus        17 v~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   96 (170)
                      +.|.|+|+++|++||+++||+++....    ..+.  .+...+                  +..+.+........     
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~~--~~~~~~------------------~~~~~l~~~~~~~~-----   52 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTFA--LFVLGS------------------GVKLGLWSRHTVEP-----   52 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----CceE--EEEeCC------------------CcEEEEeeccccCC-----
Confidence            578999999999999999999987642    1222  122111                  24566643322110     


Q ss_pred             CCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEE
Q 030857           97 GYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  158 (170)
Q Consensus        97 ~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  158 (170)
                       ..   ....+..|++|.|++   ++++++++.++|+++...|....+++.++|+|||||.|||.
T Consensus        53 -~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~  113 (114)
T cd07261          53 -AS---DATGGGSELAFMVDDGAAVDALYAEWQAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVF  113 (114)
T ss_pred             -CC---CCCCCceEEEEEcCCHHHHHHHHHHHHHCCCeEecCccccCCccEEEEECCCCCEEEee
Confidence             00   011255799999985   88999999999999988876656667789999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=6.9e-16  Score=103.88  Aligned_cols=112  Identities=17%  Similarity=0.147  Sum_probs=76.6

Q ss_pred             eeEEEEEeCChHHHHHHHHHh---cCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRV---LGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ++|++|.|+|+++|++||+++   ||++...+.   ...+ ..+ ..++                 +...+.+.......
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~---~~~~-~~~-~~~~-----------------~~~~~~l~~~~~~~   58 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED---GPGA-VGY-GKGG-----------------GGPDFWVTKPFDGE   58 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec---CCce-eEe-ccCC-----------------CCceEEEeccccCC
Confidence            579999999999999999999   588887653   1122 222 2111                 13456665432111


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCC----ccceEEEEECCCCCEEEEE
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIF  158 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iel~  158 (170)
                      .           ....+..|++|.|++   ++++++++.++|+.+...|...    ...+.+||+|||||.|||+
T Consensus        59 ~-----------~~~~~~~hi~f~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          59 P-----------ATAGNGTHVAFAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             C-----------CCCCCceEEEEECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            0           011234699999986   8889999999999988766432    2234689999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.71  E-value=5.8e-16  Score=107.21  Aligned_cols=111  Identities=16%  Similarity=0.173  Sum_probs=77.3

Q ss_pred             eEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 030857           15 HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   94 (170)
Q Consensus        15 ~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   94 (170)
                      .||.|.|+|++++.+||+++|||++..+..  .   ...|+......               ....+.+.    +     
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~--~---~~~~l~~~~~~---------------~~h~~~~~----~-----   51 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE--D---RIVFMRCHPNP---------------FHHTFAVG----P-----   51 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC--C---EEEEEEcCCCC---------------Ccceeeec----c-----
Confidence            489999999999999999999999887632  1   34555432110               01122110    1     


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCC--ccceEEEEECCCCCEEEEEecCc
Q 030857           95 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        95 ~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                              ....+++|++|.|+|   +++++++|+++|+++...|...  ...+.+||+||||+.|||.-...
T Consensus        52 --------~~~~gl~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          52 --------ASSSHFHHVNFMVTDIDDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             --------CCCCceEEEEEECCCHHHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence                    011378999999986   5577999999999987666432  12356899999999999986543

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.71  E-value=6.7e-16  Score=103.73  Aligned_cols=107  Identities=16%  Similarity=0.169  Sum_probs=74.3

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 030857           16 FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   95 (170)
Q Consensus        16 hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   95 (170)
                      ...|.|+|+++|++||++ |||++..+...   .+  .++..+                   +..++|.......+    
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~~--~~~~~~-------------------~~~l~l~~~~~~~~----   55 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA---GY--MILRRG-------------------DLELHFFAHPDLDP----   55 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC---CE--EEEEcC-------------------CEEEEEEecCcCCC----
Confidence            467999999999999999 99999765321   22  223321                   34666654321100    


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEe-------ecCCCCcc-ceEEEEECCCCCEEEEEec
Q 030857           96 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-------KKPDGGKL-KGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        96 ~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~-------~~~~~~~~-~~~~~~~DPdG~~iel~~~  160 (170)
                           .    ....|++|.|+|+++++++|+++|+++.       ..+....+ .+.++|+|||||.|||.|.
T Consensus        56 -----~----~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          56 -----A----TSPFGCCLRLPDVAALHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             -----C----CCcceEEEEeCCHHHHHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence                 0    1225899999999999999999999853       23332223 4579999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.71  E-value=6e-16  Score=102.78  Aligned_cols=106  Identities=19%  Similarity=0.279  Sum_probs=71.0

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +++|++|.|.|++++++||+ +|||++..+.   + .  ..+...+.                 +...+.+...  ..  
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~-~--~~~~~~~~-----------------~~~~~~~~~~--~~--   53 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG---D-G--LELRTAGN-----------------DHRWARLLEG--AR--   53 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C-c--eEEEecCC-----------------CceEEEeecC--CC--
Confidence            68999999999999999997 6999997542   1 1  11222111                 0122333211  10  


Q ss_pred             CCCCCCCCCCCCCCCceE--EEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           93 PDFKGYHNGNSEPRGFGH--IGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~h--l~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                                   .+..|  +.+.++|+++++++++++|+++...+... ..+.+||.|||||.|||..-
T Consensus        54 -------------~~~~~~~~~~~~~d~~~~~~~l~~~Gi~~~~~~~~~-~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          54 -------------KRLAYLSFGIFEDDFAAFARHLEAAGVALAAAPPGA-DPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             -------------CceeeEEEEeEhhhHHHHHHHHHHcCCceecCCCcC-CCCEEEEECCCCCEEEEecC
Confidence                         02234  45556899999999999999987665222 23468999999999999843

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.70  E-value=9.2e-16  Score=118.10  Aligned_cols=119  Identities=23%  Similarity=0.335  Sum_probs=80.3

Q ss_pred             CCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857            9 CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus         9 ~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ....+++|++|.|+|+++|++||+++|||++..........+...++.....                 ...+.+..  .
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~--~  192 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG-----------------VHDIALTN--G  192 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC-----------------cCceEeec--C
Confidence            3457899999999999999999999999998765433333333344432110                 12233210  0


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCe--EeecCCC-Cc-cceEEEEECCCCCEEEEEecC
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVE--FAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~--~~~~~~~-~~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .               ..+++|+||.|+|   +++++++|+++|++  +...|.. +. ...++|++||+||+|||....
T Consensus       193 ~---------------~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       193 N---------------GPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             C---------------CCceeeEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            0               1267899999998   55568999999987  4444422 11 234689999999999998754

The enzyme from Bacillus brevis contains manganese.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=6.7e-16  Score=103.92  Aligned_cols=116  Identities=21%  Similarity=0.307  Sum_probs=71.5

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 030857           16 FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   95 (170)
Q Consensus        16 hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   95 (170)
                      |++|.|+|+++|++||+++||+++.....    .+  ..+...                   +..+.+........... 
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~-------------------~~~~~l~~~~~~~~~~~-   55 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----TW--VDFDFF-------------------GHQLVAHLSPNFNADAS-   55 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----Cc--cccccc-------------------CcEEEEEeccCCCcccc-
Confidence            89999999999999999999999865421    11  111111                   12222221111100000 


Q ss_pred             CCCCCCCCCCCCceEEE--EEeCCHHHHHHHHHhcCCeEeecCCC---C--ccceEEEEECCCCCEEEEEe
Q 030857           96 KGYHNGNSEPRGFGHIG--ITVDDVYKACERFERLGVEFAKKPDG---G--KLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        96 ~~~~~~~~~~~g~~hl~--f~v~di~~~~~~l~~~G~~~~~~~~~---~--~~~~~~~~~DPdG~~iel~~  159 (170)
                        .........+..|++  |.++|+++++++|+++|+++..+|..   +  ...+.+||+|||||.|||..
T Consensus        56 --~~~~~~~~~~~~h~~~~~~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          56 --DNAVDGHPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             --cCCCCCCccCCceEEEEEeHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence              000001111345665  56689999999999999999876532   1  11367999999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=1.8e-15  Score=101.48  Aligned_cols=109  Identities=27%  Similarity=0.405  Sum_probs=75.4

Q ss_pred             eEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 030857           15 HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   94 (170)
Q Consensus        15 ~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   94 (170)
                      .|+.|.|+|++++.+||+++||++...+..    .. ..|... .                 ....+.+..  ....   
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~-~~~~~~-~-----------------~~~~~~~~~--~~~~---   54 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD----DY-AKFLLE-D-----------------PRLNFVLNE--RPGA---   54 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC----Ce-eEEEec-C-----------------CceEEEEec--CCCC---
Confidence            599999999999999999999998866521    11 122211 1                 022233321  1100   


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCc---cceEEEEECCCCCEEEEEec
Q 030857           95 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGK---LKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        95 ~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~---~~~~~~~~DPdG~~iel~~~  160 (170)
                               ...+..|++|.|++   ++++++++.++|+++...+....   ..+.+|++|||||.|||+..
T Consensus        55 ---------~~~~~~h~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          55 ---------PGGGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             ---------CCCCeeEEEEEeCCHHHHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence                     00266899999987   88899999999999887653321   13579999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.69  E-value=1.3e-15  Score=99.35  Aligned_cols=111  Identities=29%  Similarity=0.372  Sum_probs=81.9

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 030857           16 FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   95 (170)
Q Consensus        16 hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   95 (170)
                      |+.|.|+|++++.+||+++||++........  ....+++..+                   +..+++....+...    
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~--~~~~~~~~~~-------------------~~~i~l~~~~~~~~----   55 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNG--GAEFAVLGLG-------------------GTRLELFEGDEPAP----   55 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccC--CEEEEEEecC-------------------CceEEEecCCCCCC----
Confidence            7899999999999999999999998875421  1233444432                   35777765433211    


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCC-CCccceEEEEECCCCCEEEE
Q 030857           96 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPDDYWIEI  157 (170)
Q Consensus        96 ~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPdG~~iel  157 (170)
                        .    ....+..|++|.|+|++++++++.++|+.+...+. .....+.+|+.||+|+.|||
T Consensus        56 --~----~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          56 --A----PSGGGGVHLAFEVDDVDAAYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             --c----ccCCCeeEEEEECCCHHHHHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence              0    11236689999999999999999999998887764 23335689999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=3e-15  Score=99.70  Aligned_cols=103  Identities=20%  Similarity=0.233  Sum_probs=70.3

Q ss_pred             EEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 030857           17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   96 (170)
Q Consensus        17 v~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   96 (170)
                      ..|.|+|+++|++||++ |||++....   + .  .+++..+                   +..+.+...... .     
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~---~-~--~~~l~~~-------------------~~~l~l~~~~~~-~-----   52 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEN---D-N--LAYFRLG-------------------NCAFYLQDYYVK-D-----   52 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecC---C-C--EEEEEcC-------------------CEEEEeecCCCc-c-----
Confidence            56889999999999988 999998763   1 2  2334322                   234444221111 0     


Q ss_pred             CCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEee-----cCCC-CccceEEEEECCCCCEEEEEe
Q 030857           97 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK-----KPDG-GKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        97 ~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~-----~~~~-~~~~~~~~~~DPdG~~iel~~  159 (170)
                       .       ....+++|.|+|+++++++|+++|+++..     .+.. ..+.+.++|+|||||+|+|.+
T Consensus        53 -~-------~~~~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          53 -W-------AENSMLHLEVDDLEAYYEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             -c-------ccCCEEEEEECCHHHHHHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence             0       12258999999999999999999987532     2222 233468999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.65  E-value=5.4e-15  Score=113.55  Aligned_cols=115  Identities=20%  Similarity=0.350  Sum_probs=78.5

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC--c-ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--M-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      ..+++||+|.|+|++++.+||+++|||++........  + .+..+|+..+..                 ...+.+... 
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~-----------------~~~~~l~~~-  201 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER-----------------HHSLAFAAG-  201 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC-----------------cceEEEecC-
Confidence            3589999999999999999999999999876532211  1 123445543211                 222333211 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCeEeecCCC-C-ccceEEEEECCCCCEEEEEe
Q 030857           88 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDG-G-KLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~-~-~~~~~~~~~DPdG~~iel~~  159 (170)
                       +              ...+++|++|.|+|+++   ++++|+++|+ ....+.. + ....++|++||+|++||+..
T Consensus       202 -~--------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       202 -P--------------SEKRLNHLMLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             -C--------------CCCceEEEEEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence             1              01267899999998777   7999999999 4444422 2 22457899999999999976

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=7.7e-15  Score=98.08  Aligned_cols=115  Identities=17%  Similarity=0.125  Sum_probs=74.6

Q ss_pred             EEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 030857           17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   96 (170)
Q Consensus        17 v~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   96 (170)
                      |.|.|+|++++.+||+++|||++..+.   ...  ..++..+                   +..+++...........  
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~~--~~~~~~~-------------------~~~~~l~~~~~~~~~~~--   55 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---NDG--VAFFQLG-------------------GLVLALFPREELAKDAG--   55 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CCc--eEEEEcC-------------------CeEEEEecchhhhhhcC--
Confidence            689999999999999999999987651   112  2233321                   34566653211100000  


Q ss_pred             CCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCeEeecCCCCcc-ceEEEEECCCCCEEEEEe
Q 030857           97 GYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        97 ~~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~  159 (170)
                       .... ....+..|++|.+   +|++++++++++.|+++..++...++ ++.+|++||+||+|||..
T Consensus        56 -~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          56 -VPVP-PPGFSGITLAHNVRSEEEVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             -CCCC-CCCccceEEEEEcCCHHHHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence             0000 0111334566665   58999999999999999877654444 567899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.65  E-value=6.5e-15  Score=113.92  Aligned_cols=113  Identities=22%  Similarity=0.242  Sum_probs=80.1

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|++|.|+|++++++||+++|||++..+..   .   ..++.....               .....+.+...  .  
T Consensus         3 ~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~---~---~~~~~~~~~---------------~~~~~~~l~~~--~--   57 (303)
T TIGR03211         3 MRLGHVELRVLDLEESLKHYTDVLGLEETGRDG---Q---RVYLKAWDE---------------WDHYSVILTEA--D--   57 (303)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC---c---eEEEEeccc---------------cccceEeeccC--C--
Confidence            479999999999999999999999999876532   1   122221100               00223333210  0  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCC--CCccceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~--~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                                   ..++.|++|.|+   |+++++++|+++|+++...+.  ....++.+||+|||||.|||.+...
T Consensus        58 -------------~~g~~hiaf~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~  120 (303)
T TIGR03211        58 -------------TAGLDHMAFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKE  120 (303)
T ss_pred             -------------CCceeEEEEEeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccc
Confidence                         126789999998   799999999999999876553  2223467899999999999998543

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.64  E-value=1.7e-15  Score=100.27  Aligned_cols=97  Identities=26%  Similarity=0.341  Sum_probs=74.8

Q ss_pred             eEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 030857           15 HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   94 (170)
Q Consensus        15 ~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   94 (170)
                      +||+|.|+|++++++||+++||++.......+..++...++..++.                 ...+||+.+.....  .
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~-----------------~~~iELi~p~~~~~--~   61 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG-----------------PVQIELIQPLDGDS--P   61 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE-----------------TEEEEEEEESSTTC--H
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC-----------------cEEEEEEEeCCCCc--c
Confidence            6999999999999999999999998877665556666666655431                 26899998755431  0


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecC
Q 030857           95 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  136 (170)
Q Consensus        95 ~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  136 (170)
                         +..   ...|++||||.|+|++++.++|+++|+++...+
T Consensus        62 ---~~~---~~~gi~Hia~~v~D~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   62 ---LDR---GGGGIHHIAFEVDDLDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             ---HHH---TSSEEEEEEEEESHHHHHHHHHHHTTECEEECE
T ss_pred             ---ccc---CCCCEEEEEEEeCCHHHHHHHHHHCCCEEcccC
Confidence               111   234899999999999999999999999988654

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.63  E-value=1.4e-14  Score=111.61  Aligned_cols=111  Identities=24%  Similarity=0.322  Sum_probs=78.8

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++..+..    .  ..++......               ....+.+...  +  
T Consensus         3 ~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~--~~~~~~~~~~---------------~~~~l~l~~~--~--   57 (294)
T TIGR02295         3 LRTGHVELRVTDLDKSREFYVDLLGFRETESDK----E--YIYLRGIEEF---------------QHHSLVLTKA--P--   57 (294)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC----C--eEEEeccCcC---------------CceEEEeeeC--C--
Confidence            489999999999999999999999999876521    1  2223211100               0123333211  1  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                                   ..++.|++|.|+   |+++++++|+++|+++...+..+ .++.+||+|||||.|||+...
T Consensus        58 -------------~~~~~hiaf~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~-~~~~~~~~DPdG~~iEl~~~~  116 (294)
T TIGR02295        58 -------------SAALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVRDGG-QPEALRVEDPFGYPIEFYFEM  116 (294)
T ss_pred             -------------CcCccEEEEEeCCHHHHHHHHHHHHhcCCcEEeecCCC-CceEEEEECCCCCEEEEEEch
Confidence                         015689999997   79999999999999987655322 246789999999999999743

The enzyme from Bacillus brevis contains manganese.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.60  E-value=8.3e-14  Score=93.43  Aligned_cols=120  Identities=18%  Similarity=0.179  Sum_probs=84.3

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ++..+.|..|.|+|++++++||+++||++........+.  ..+.+..+...    .           +..+.-   ...
T Consensus         6 ~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~--~y~~f~~~~~~----~-----------gG~l~~---~~~   65 (127)
T COG3324           6 EKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEM--RYAVFPADGAG----A-----------GGGLMA---RPG   65 (127)
T ss_pred             cCCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCc--eEEEEECCCcc----c-----------cceecc---CCc
Confidence            345789999999999999999999999999887443222  22222211100    0           111111   000


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCc-cceEEEEECCCCCEEEEEecC
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                              ...+    .+...+.|.|+|+++..+|..++|.+++.++..-+ .++.+.+.||+||+|-|++..
T Consensus        66 --------~~p~----~~~~~iy~~v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          66 --------SPPG----GGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             --------CCCC----CCCEEEEEecCChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence                    0000    24468999999999999999999999999887655 677888999999999998753

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.60  E-value=3.2e-14  Score=109.30  Aligned_cols=110  Identities=20%  Similarity=0.283  Sum_probs=77.8

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|++|.|+|+++|++||+++|||++..+..  + .  ..|+..+..                 +..+.+..  .+. 
T Consensus         2 ~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~-~--~~~~~~~~~-----------------~~~~~l~~--~~~-   56 (286)
T TIGR03213         2 RGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--N-D--ALYLRLDSR-----------------AHRIAVHP--GES-   56 (286)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--C-c--eEEEEcCCC-----------------ceEEEEEE--CCc-
Confidence            378999999999999999999999999765421  1 1  123333211                 23343321  110 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCC---C-CccceEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD---G-GKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~---~-~~~~~~~~~~DPdG~~iel~~~  160 (170)
                                    .++.|++|.|++   ++++.++|+++|+++...+.   . ...++.++|+|||||.|||+..
T Consensus        57 --------------~~~~~~~f~V~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~  118 (286)
T TIGR03213        57 --------------DDLAYAGWEVADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYG  118 (286)
T ss_pred             --------------CCeeeEeeeeCCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEc
Confidence                          145799999998   89999999999999876542   1 1224578999999999999864

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.53  E-value=1.5e-13  Score=99.76  Aligned_cols=106  Identities=20%  Similarity=0.320  Sum_probs=72.2

Q ss_pred             eeeEEEEEeC--ChHHHHHHHHHhcCCEEeEeeecCC--cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           13 FPHFTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        13 ~l~hv~i~v~--d~~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      +++|+++.|.  |++++++||+++|||+.......++  .......+..+.                 +...++|..+..
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~-----------------g~i~l~L~~~~~   65 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD-----------------GKIRIPLNEPAS   65 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC-----------------CcEEEEEecCCC
Confidence            7899999999  9999999999999999988754332  223333343221                 245777765433


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecC
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  136 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  136 (170)
                      +........+.. .....|++||||.|+|+++++++|+++|+++...|
T Consensus        66 ~~~~s~~~~fl~-~~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P  112 (191)
T cd07250          66 GKRKSQIQEFLE-YYGGAGVQHIALATDDIFATVAALRARGVEFLPIP  112 (191)
T ss_pred             CCCccHHHHHHH-HhCCCceeEEEEECCCHHHHHHHHHHcCCeeccCc
Confidence            111110000100 01124889999999999999999999999998776

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.53  E-value=1.1e-13  Score=100.62  Aligned_cols=121  Identities=37%  Similarity=0.634  Sum_probs=97.8

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC-----------cceEEEeeeccCCCCCCCCcccceeeecCCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKP   78 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (170)
                      ...++-|+.+.|-|..+++.||+++|||++.+...+++           ..|.-.|++++...               ..
T Consensus        14 ~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEd---------------sh   78 (299)
T KOG2943|consen   14 DTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPED---------------SH   78 (299)
T ss_pred             cchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCc---------------cc
Confidence            34588999999999999999999999999999877776           67888888876532               27


Q ss_pred             cEEEEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEE
Q 030857           79 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  158 (170)
Q Consensus        79 ~~lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  158 (170)
                      +.+||.++.+-..      +..|+    +|.|+++.++|+-...+++...|.+       +.....+++.||||+.++|+
T Consensus        79 FViELTYNYgV~~------YelGn----dfg~i~I~s~dv~~~ve~v~~p~~~-------~~g~~~~~v~dPdGykF~l~  141 (299)
T KOG2943|consen   79 FVIELTYNYGVSK------YELGN----DFGGITIASDDVFSKVEKVNAPGGK-------GSGCGIAFVKDPDGYKFYLI  141 (299)
T ss_pred             EEEEEEeccCccc------eeccC----CcccEEEeHHHHHHHHHHhcCcCCc-------ccceEEEEEECCCCcEEEEe
Confidence            8999999887754      77776    8999999999988888887766541       12233688999999999999


Q ss_pred             ecCc
Q 030857          159 DLKT  162 (170)
Q Consensus       159 ~~~~  162 (170)
                      ++.+
T Consensus       142 ~~~p  145 (299)
T KOG2943|consen  142 DRGP  145 (299)
T ss_pred             ccCC
Confidence            8654

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.50  E-value=1.2e-12  Score=97.26  Aligned_cols=121  Identities=17%  Similarity=0.301  Sum_probs=84.8

Q ss_pred             CCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857            7 TSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus         7 ~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      +.+..+.+..+.|.|+|++++..||+++||+++..+...      .+.++.++                  ...+.|.+.
T Consensus         4 ~~~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~------~v~L~vgg------------------~~LL~L~q~   59 (265)
T COG2514           4 ALTTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDG------SVTLGVGG------------------TPLLTLEQF   59 (265)
T ss_pred             ccCCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCc------eEEEeeCC------------------EEEEEEEeC
Confidence            344556899999999999999999999999999987431      12222221                  346666654


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           87 WGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ......+         ....|+.|++|-+++   +..+..++.+.|+.+... .+....-.+||.||+||.||+.-.+
T Consensus        60 ~~a~~~~---------~~~aGLyH~AfLlP~r~~L~~~l~hl~~~~~~l~Ga-~DH~vSEAlYl~DPEGNGIEiYaDr  127 (265)
T COG2514          60 PDARRPP---------PRAAGLYHTAFLLPTREDLARVLNHLAEEGIPLVGA-SDHLVSEALYLEDPEGNGIEIYADR  127 (265)
T ss_pred             CCCCCCC---------ccccceeeeeeecCCHHHHHHHHHHHHhcCCccccc-CcchhheeeeecCCCCCeEEEEecC
Confidence            3332211         112388999999995   777788899999887622 2222334689999999999998654

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.33  E-value=3.4e-11  Score=95.19  Aligned_cols=107  Identities=15%  Similarity=0.274  Sum_probs=70.0

Q ss_pred             eeeeEEEEEeC--ChHHHHHHHHHhcCCEEeEeeecCC--cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857           12 RFPHFTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus        12 ~~l~hv~i~v~--d~~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      .+++|+++.|.  |++++++||+++|||++..+.....  ..+....+..                 +.+...++|..+.
T Consensus       157 ~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~-----------------~~g~~~i~L~ep~  219 (353)
T TIGR01263       157 IAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMAS-----------------PDGKVKIPLNEPA  219 (353)
T ss_pred             EEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEEC-----------------CCCcEEEEEeccC
Confidence            46999999999  9999999999999999987654221  1111111111                 1124577876532


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecC
Q 030857           88 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  136 (170)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  136 (170)
                      ..........+.. .....|++||||.|+|+++++++|+++|+++...|
T Consensus       220 ~~~~~s~i~~fl~-~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       220 SGKDKSQIEEFLE-FYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             CCCCCCHHHHHHH-HcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            2111111000100 01124889999999999999999999999998766

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.31  E-value=1.9e-11  Score=81.85  Aligned_cols=130  Identities=25%  Similarity=0.306  Sum_probs=75.0

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcc---eEEEeeeccCCCCCCCCcccceeeecCCC-cEEEEEeccC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK---FSLYFLGYEDTASAPADPVDRTVWTFGKP-ATIELTHNWG   88 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lel~~~~~   88 (170)
                      +++|++|.|+|+++|++||+++||+++..........   ....+.......  ...      +...+. ...+......
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~   73 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGP--GEL------LAFFGFEGRAGTGFVGD   73 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCc--ccc------eeecccccccccccccc
Confidence            6899999999999999999999999999875433211   111222111000  000      000000 0000000000


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEe
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  159 (170)
                      ..     .....+   ..+..|+++.+++   +..........|..+..... ...+..+|++||||+.||+.+
T Consensus        74 ~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          74 VA-----LGVPGG---DLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             eE-----EeecCc---hhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcceEEEEECCCCcEEEeeC
Confidence            00     000000   0246799999998   67777777788888765543 333447999999999999974

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.28  E-value=1.2e-10  Score=75.63  Aligned_cols=125  Identities=22%  Similarity=0.319  Sum_probs=77.9

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      .+-|++|.|+|++++++||.++||++.-++.+.   -+..-+.+-                    +....+.  +.++.+
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd~---wvdfDfyGH--------------------Q~v~Hl~--~q~~~~   58 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRSTDT---WVDFDFYGH--------------------QVVAHLT--PQPDSQ   58 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccccce---EEEeeeccc--------------------EEEEEec--CCcccc
Confidence            467999999999999999999999998776321   112222221                    1223332  111111


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCC---Ccc--ceEEEEECCCCCEEEEEecCccc
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GKL--KGVAFIKDPDDYWIEIFDLKTIG  164 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~---~~~--~~~~~~~DPdG~~iel~~~~~~~  164 (170)
                       ....+ .+...+....-+.|.++|..++.++++++|+.+..+|..   |.-  .+-+|+.||-||.+|+-.-+...
T Consensus        59 -~~g~V-~~~~v~~pHfGvVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~~e  133 (138)
T COG3565          59 -GSGKV-DGHGVPPPHFGVVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRDQE  133 (138)
T ss_pred             -cCccc-CCCCCCCccceEEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccchh
Confidence             11111 111112222356677889999999999999999877731   222  24578899999999986554433

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.25  E-value=9.9e-10  Score=74.93  Aligned_cols=117  Identities=19%  Similarity=0.185  Sum_probs=84.8

Q ss_pred             EEEEeC-ChHHHHHHHHHhcCCEEeEeeecCC----------cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEe
Q 030857           17 TMFRIK-DPKVSLDFYSRVLGMSLLKRLDFPE----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH   85 (170)
Q Consensus        17 v~i~v~-d~~~s~~FY~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~   85 (170)
                      .-|.++ |.+++++||+++||.+...+....+          ..+..+-+..+                   +..|.+..
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~-------------------g~~im~sd   64 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG-------------------GSTIMLSD   64 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC-------------------CEEEEEec
Confidence            457788 9999999999999999999887776          34555555543                   34566643


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEecC
Q 030857           86 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  161 (170)
                      ......      ...++   +.-..|.+.++|++++++++.+.|+++..++.+..++ +...++||.|+.|-|....
T Consensus        65 ~~~~~~------~~~~~---~~s~~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          65 AFPDMG------ATEGG---GTSLSLDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             CCCccC------cccCC---CeeEEEEEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecCc
Confidence            322211      11111   1224778888899999999999999999888776665 4567999999999998654

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.24  E-value=3.4e-10  Score=89.55  Aligned_cols=124  Identities=20%  Similarity=0.172  Sum_probs=78.1

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +++|+.|.|+|++++++||++.|||++.......... ....++.                   +...++|.....+.. 
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~-------------------G~~~l~L~~~~~~~s-   60 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQ-------------------GQINFVLTAPYSSDS-   60 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEe-------------------CCEEEEEecCCCCCc-
Confidence            6899999999999999999999999998763222222 1222222                   245777764432211 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCC--ccceEEEEECCCCCEEEEEec
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iel~~~  160 (170)
                       ....+..  ....+..|+||.|+|++++++++.++|+++..+|...  ..-...-++-++|..+-|+++
T Consensus        61 -~~~~~~~--~hg~gv~~iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~  127 (353)
T TIGR01263        61 -PAADFAA--KHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDR  127 (353)
T ss_pred             -hHHHHHH--hCCCceEEEEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcC
Confidence             0000100  1123789999999999999999999999998776432  111112234455555555553

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.24  E-value=1e-09  Score=74.53  Aligned_cols=110  Identities=12%  Similarity=0.059  Sum_probs=71.1

Q ss_pred             EEEEe-CChHHHHHHHHHhcCCEEeEeeecCC----------cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEe
Q 030857           17 TMFRI-KDPKVSLDFYSRVLGMSLLKRLDFPE----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH   85 (170)
Q Consensus        17 v~i~v-~d~~~s~~FY~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~   85 (170)
                      ..|.+ .|.+++++||+++||+++.......+          ..+....+..+                   +..+.+..
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~-------------------g~~l~~~d   63 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIG-------------------GQRLMASD   63 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEEC-------------------CEEEEEEc
Confidence            45677 89999999999999999998754321          11222333321                   33555543


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEE
Q 030857           86 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEI  157 (170)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel  157 (170)
                      ......      .     ......++++.|+|   +++++++|.+.| ++..++...+++ +..+++||+|+.|+|
T Consensus        64 ~~~~~~------~-----~~~~~~~l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i  127 (128)
T cd06588          64 GGPGFP------F-----TFGNGISLSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQI  127 (128)
T ss_pred             CCCCCC------C-----CCCCCEEEEEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEe
Confidence            211110      0     01133588999986   778889987766 777666554444 467899999999997

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.24  E-value=1e-10  Score=77.11  Aligned_cols=123  Identities=15%  Similarity=0.159  Sum_probs=75.1

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +...|+|.|+|+++|.+||+. |||+.........   ..+++-.+                   ...+.|+....-   
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~~-------------------ni~vMLL~~~~f---   56 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIISD-------------------NIFVMLLEEARF---   56 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEec-------------------cEEEEEeccHHh---
Confidence            567899999999999999966 8999987643222   22232221                   223333321000   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ..+..-.........-.-+|+.+.   +++++.++..++|.+...++.+...-+..-|.|||||.||++-..
T Consensus        57 q~F~~~~i~dt~~s~evli~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m~  128 (133)
T COG3607          57 QTFTKRQIADTTKSREVLISLSAGSREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWMD  128 (133)
T ss_pred             hhhcccccccccCCceEEEEeccCcHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEeC
Confidence            000000011111123357888886   599999999999999977775433222345699999999998654

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.23  E-value=1.2e-10  Score=92.52  Aligned_cols=132  Identities=15%  Similarity=0.276  Sum_probs=85.6

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCc-----ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-----KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      .+++|+++.|.+++.++.||+++|||+........+.     ++....+..+                 .+...++|..+
T Consensus       179 ~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp-----------------~g~v~ipLnEP  241 (398)
T PLN02875        179 RRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASN-----------------NEMVLLPLNEP  241 (398)
T ss_pred             ceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcC-----------------CCcEEEEeccC
Confidence            4799999999999999999999999999876543221     1223333322                 23467888665


Q ss_pred             cCC-CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhc----CCeEeecC-CC---------C----c-------
Q 030857           87 WGT-ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL----GVEFAKKP-DG---------G----K-------  140 (170)
Q Consensus        87 ~~~-~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~----G~~~~~~~-~~---------~----~-------  140 (170)
                      ... ...+....+.. .....|++||||.|+||.++.++|+++    |+++...| ..         +    .       
T Consensus       242 ~~~~~~~SqI~eFL~-~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~Pp~~YYd~L~~R~~~~l~~e~~~~L~  320 (398)
T PLN02875        242 TFGTKRKSQIQTYLE-HNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPPPPTYYKNLKKRVGDVLTEEQIKECE  320 (398)
T ss_pred             CCCCCCcChHHHHHH-hcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCChHHHHHHHHHHhccCCChhhHHHHH
Confidence            321 11111111211 122249999999999999999999999    99999854 10         1    0       


Q ss_pred             cceEEEEECCCCCEEEEEecC
Q 030857          141 LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       141 ~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ...+++-+|.+|.++.|+.+.
T Consensus       321 ~~~ILvD~d~~G~LLQIFTkp  341 (398)
T PLN02875        321 ELGILVDKDDQGVLLQIFTKP  341 (398)
T ss_pred             HcCEEEecCCCceEEEEeccc
Confidence            012556667777777766653

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.21  E-value=1.2e-10  Score=84.94  Aligned_cols=121  Identities=26%  Similarity=0.418  Sum_probs=89.7

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      .+..|.+.|.|+++|++||.+.|||++...    +.......+++++.                 +..|||..+.+... 
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~-----------------q~~LElt~~~~~id-  206 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDE-----------------QCVLELTYNYDVID-  206 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCc-----------------ceEEEEEeccCccc-
Confidence            678999999999999999999999999875    22346667777664                 58999988766543 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecC----CCCccc-eEEEEECCCCCEEEEEecCcccc
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKP----DGGKLK-GVAFIKDPDDYWIEIFDLKTIGK  165 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~----~~~~~~-~~~~~~DPdG~~iel~~~~~~~~  165 (170)
                           .      ..++..++|+++  ++..+.+.++..+..+..+.    ..+... .++.+.||||+-|.++....+++
T Consensus       207 -----~------~kg~griafaip~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~  275 (299)
T KOG2943|consen  207 -----R------AKGFGRIAFAIPTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRK  275 (299)
T ss_pred             -----c------cccceeEEEeccccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHH
Confidence                 1      126678888775  68888888888866665443    333333 25668899999999998776665


Q ss_pred             c
Q 030857          166 I  166 (170)
Q Consensus       166 ~  166 (170)
                      +
T Consensus       276 l  276 (299)
T KOG2943|consen  276 L  276 (299)
T ss_pred             H
Confidence            4

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.90  E-value=2.3e-08  Score=77.53  Aligned_cols=104  Identities=18%  Similarity=0.276  Sum_probs=67.6

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +..||+|.|+|+++|++||+++|++.. ..    +.. ..++   ++                   ..+-+.....  . 
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fs----de~-a~cm---~d-------------------tI~vMllt~~--D-  295 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC-WD----GDK-LFLL---GK-------------------TSLYLQQTKA--E-  295 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC-CC----CCc-cccc---cC-------------------cEEEEEecCC--C-
Confidence            567999999999999999999988874 22    111 1222   11                   2222221111  1 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEe
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  159 (170)
                      ..          ...-.-+|++++   +++++.+++.++|......+.+...+  --|.|||||+||++-
T Consensus       296 ~~----------~~~evLl~Ls~~Sre~VD~lv~~A~aaGG~~~~~~~D~Gf~--rsf~D~DGH~WEi~~  353 (357)
T PRK01037        296 KK----------NRGTTTLSLELECEHDFVRFLRRWEMLGGELGEQADGHFPL--RLVFDLDGHIWVVSC  353 (357)
T ss_pred             CC----------CcceEEEEeccCCHHHHHHHHHHHHHcCCCCCCCcccccCc--ceeECCCCCEEEEEE
Confidence            10          013367899998   48999999999999765555443223  335899999999974

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.64  E-value=2.4e-07  Score=66.22  Aligned_cols=99  Identities=13%  Similarity=0.206  Sum_probs=53.6

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   93 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   93 (170)
                      |+|+.+.|+|++++.++|++.|||++......+..+..-..+.++                   ...|||+.........
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~-------------------~~YlEli~i~~~~~~~   61 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG-------------------DGYLELIAIDPEAPAP   61 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S-------------------SSEEEEEEES-HHHST
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC-------------------CceEEEEEeCCccccc
Confidence            689999999999999999888999999876555433322222222                   2399999853222211


Q ss_pred             CCC-CCCCC-CCCCCCceEEEEEeCCHHHHHHHHHhcCCe
Q 030857           94 DFK-GYHNG-NSEPRGFGHIGITVDDVYKACERFERLGVE  131 (170)
Q Consensus        94 ~~~-~~~~~-~~~~~g~~hl~f~v~di~~~~~~l~~~G~~  131 (170)
                      ... .+... .....|+..+||.++|+++..+++++.|+.
T Consensus        62 ~~~~~~~~~~~~~~~g~~~~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   62 DRGRWFGLDRLAGGEGLYGWALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             GGGT-TTTHHHHT--EEEEEEEE-S-HHHHHHHHHTTT-E
T ss_pred             ccccceechhhcCCCCeEEEEEecCCHHHHHHHHHhcCCC
Confidence            000 01000 012348899999999999999999999986

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.58  E-value=1.3e-07  Score=72.89  Aligned_cols=107  Identities=16%  Similarity=0.223  Sum_probs=69.1

Q ss_pred             eeeeEEEEEeC--ChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           12 RFPHFTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        12 ~~l~hv~i~v~--d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ..++|++..|.  .++....||+++|+|+.....+.++.. ....-+              ..--+.+...|-|-...+.
T Consensus       166 ~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~-tgl~Sr--------------am~Sp~G~vrlplN~s~~~  230 (363)
T COG3185         166 TAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPI-TGLRSR--------------AMVSPCGKVRLPLNESADD  230 (363)
T ss_pred             eeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCc-ccEEEe--------------eEecCCCcEEeecccCCCc
Confidence            47999998886  999999999999999999987665422 111111              0001122334444222111


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecC
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  136 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  136 (170)
                        .+... -........|++||+|.++||.++.+++++.|+++...|
T Consensus       231 --~sqi~-efl~~y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip  274 (363)
T COG3185         231 --KSQIG-EFLREYRGEGIQHIAFGTDDIYATVAALRERGVKFLPIP  274 (363)
T ss_pred             --hhHHH-HHHHHhCCCcceEEEecccHHHHHHHHHHHcCCccCCCc
Confidence              11000 001122345999999999999999999999999998866

>PRK10148 hypothetical protein; Provisional

Probab=98.48  E-value=2.9e-05  Score=54.00  Aligned_cols=51  Identities=10%  Similarity=-0.083  Sum_probs=39.4

Q ss_pred             eEEEEEeCCHHH---HHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857          109 GHIGITVDDVYK---ACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus       109 ~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                      .++++.++|.++   ++++| +.|.++..++....++ +..-|+||.|+.|.|...
T Consensus        87 ~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         87 FTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             EEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence            578888888776   55655 6888888887666665 457799999999999764

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.46  E-value=1.5e-05  Score=52.59  Aligned_cols=119  Identities=19%  Similarity=0.295  Sum_probs=62.2

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   93 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   93 (170)
                      +.+..|.|.|-+..++||+++|||++..+..      .++.++...                 +...+.|-..+..-   
T Consensus         1 f~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~-----------------~~erlvlEESP~~r---   54 (125)
T PF14506_consen    1 FIIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQ-----------------KEERLVLEESPSMR---   54 (125)
T ss_dssp             -EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT-------------------EEEEEEE--TTT---
T ss_pred             CcCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCC-----------------CceEEEEecCCccc---
Confidence            3567899999999999999999999998732      344554321                 12344443332211   


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCcccc
Q 030857           94 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK  165 (170)
Q Consensus        94 ~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  165 (170)
                       .+.+    .++.-+.++.+.|++-.++ +.|.+.|.++.. ...|..|+.+-..+|+|..|.|........
T Consensus        55 -tr~V----~G~KKl~~ivIkv~~~~EI-e~LLar~~~~~~-l~kg~~gyAfe~vSPEgd~~llhaEdd~~~  119 (125)
T PF14506_consen   55 -TRAV----EGPKKLNRIVIKVPNPKEI-EALLARGAQYDR-LYKGKNGYAFEAVSPEGDRFLLHAEDDISD  119 (125)
T ss_dssp             --B------SSS-SEEEEEEEESSHHHH-HHHHHC-S--SE-EEE-SSSEEEEEE-TT--EEEEE--S-GGG
T ss_pred             -cccc----cCcceeeEEEEEcCCHHHH-HHHHhcccccce-eEEcCCceEEEEECCCCCEEEEEEcCCHhH
Confidence             0011    1234678999999874443 444555554322 222344555667799999999987665443

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.34  E-value=6.8e-06  Score=61.57  Aligned_cols=33  Identities=21%  Similarity=0.393  Sum_probs=30.5

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEe
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~   42 (170)
                      .+..+.||.|.|.|++++.+||+++|||....+
T Consensus       165 ~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~  197 (265)
T COG2514         165 AGTIIGHVHLKVADLEEAEQFYEDVLGLEVTAR  197 (265)
T ss_pred             CCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeec
Confidence            345899999999999999999999999999887

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.32  E-value=3.5e-06  Score=64.27  Aligned_cols=104  Identities=13%  Similarity=0.208  Sum_probs=65.6

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCc--ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      .-.++|||.+.|.|...+..||+..|||++........+  .+.-..++.                   +....-+....
T Consensus        14 ~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~-------------------g~~vFv~~s~~   74 (381)
T KOG0638|consen   14 KFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQ-------------------GKIVFVFNSAY   74 (381)
T ss_pred             ceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhc-------------------CCEEEEEecCC
Confidence            346899999999999999999999999999875322111  111111111                   11222222222


Q ss_pred             CCCCCCCCCC--CCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCC
Q 030857           88 GTESDPDFKG--YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  137 (170)
Q Consensus        88 ~~~~~~~~~~--~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~  137 (170)
                      .+... ....  ...|.    +..-+||.|+|++++.+.+.++|+.+..+|.
T Consensus        75 ~p~~~-~~G~~l~~Hgd----gvkdvafeVeD~da~~~~~va~Ga~v~~~p~  121 (381)
T KOG0638|consen   75 NPDNS-EYGDHLVKHGD----GVKDVAFEVEDADAIFQEAVANGAKVVRPPW  121 (381)
T ss_pred             CCCch-hhhhhhhhccc----chhceEEEecchHHHHHHHHHcCCcccCCcc
Confidence            22110 0000  11222    5678999999999999999999999998874

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.24  E-value=3.5e-05  Score=61.74  Aligned_cols=129  Identities=16%  Similarity=0.177  Sum_probs=77.7

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC--cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC-
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE-   90 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~-   90 (170)
                      ++||.++|.|..++..||+..|||+.........  .......++-+                   ...+-+.....+. 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g-------------------~i~fv~~~~~~~~~   61 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSG-------------------DLVFLFTAPYSPKI   61 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeC-------------------CEEEEEeCCCCCcc
Confidence            6899999999999999999999999987643211  11122222311                   2233332221110 


Q ss_pred             -C-----CCC-CCC-CCCC------CCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCC-c---cc--eEEEEECC
Q 030857           91 -S-----DPD-FKG-YHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-K---LK--GVAFIKDP  150 (170)
Q Consensus        91 -~-----~~~-~~~-~~~~------~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~-~---~~--~~~~~~DP  150 (170)
                       .     .++ ..+ +..+      ..-+.+..-++|+|+|.+++++++.+.|.+....|... .   .+  ...-++-+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~  141 (398)
T PLN02875         62 GAGDDDPASTAPHPSFSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELY  141 (398)
T ss_pred             ccccccccccccccccCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEcc
Confidence             0     000 000 0000      00113778999999999999999999999998876431 1   11  23346678


Q ss_pred             CCCEEEEEecC
Q 030857          151 DDYWIEIFDLK  161 (170)
Q Consensus       151 dG~~iel~~~~  161 (170)
                      +|..+-|+++.
T Consensus       142 G~~~h~lVdr~  152 (398)
T PLN02875        142 GDVVLRYVSYK  152 (398)
T ss_pred             CCcEEEEEccC
Confidence            88888888864

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.09  E-value=1.4e-05  Score=54.89  Aligned_cols=120  Identities=21%  Similarity=0.253  Sum_probs=71.0

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      ..+++|.+.|.|.+++.+|++ .|||+...+....  ...+ |-+                    +...+-|-.  .+..
T Consensus         8 ~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk--~v~l-~rQ--------------------G~I~~vln~--ep~s   61 (139)
T PF14696_consen    8 DGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK--DVTL-YRQ--------------------GDINFVLNS--EPDS   61 (139)
T ss_dssp             EEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC--SEEE-EEE--------------------TTEEEEEEE--ESTS
T ss_pred             CCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc--ceEE-EEe--------------------CCEEEEEeC--CCcc
Confidence            478999999999888888884 6999999875322  2222 222                    122333322  2211


Q ss_pred             CC-CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           92 DP-DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~-~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      .. ... ...|.    +..-++|+|+|.+++++++.+.|.+....+.....-..--++-++|.++.|+++..
T Consensus        62 ~a~~~~-~~HG~----sv~aiafrV~Da~~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVdr~~  128 (139)
T PF14696_consen   62 FAAEFA-AQHGP----SVCAIAFRVDDAAAAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVDRYG  128 (139)
T ss_dssp             CHHHHH-HHHSS----EEEEEEEEES-HHHHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE--S
T ss_pred             hHHHHH-HhcCC----EEEEEEEEeCCHHHHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEecCC
Confidence            00 000 11222    77899999999999999999999999877632211223457889999999998743

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.23  E-value=0.027  Score=37.53  Aligned_cols=96  Identities=18%  Similarity=0.222  Sum_probs=53.2

Q ss_pred             CChHHHHHHHHHhcCCEEeEe-eecCC------cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 030857           22 KDPKVSLDFYSRVLGMSLLKR-LDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   94 (170)
Q Consensus        22 ~d~~~s~~FY~~~lG~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   94 (170)
                      .+.++|.+||.++||-..+.. ...++      ..+..+-+..                   ++..+...... + .   
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i-------------------~g~~lm~~D~~-~-~---   66 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTI-------------------GGQKLMASDGG-P-D---   66 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEE-------------------TTEEEEEEEES-T-S---
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEE-------------------CCeEEEEECCC-C-C---
Confidence            589999999999998533322 22221      1222333332                   13445444332 1 1   


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEE
Q 030857           95 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  158 (170)
Q Consensus        95 ~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  158 (170)
                         +..+     .-..|++.++|   ++.++++|.+.|-     +    ......+.|.-|..|.|+
T Consensus        67 ---~~~~-----~~~sl~i~~~~~ee~~~~f~~Ls~gG~-----~----~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   67 ---FPFG-----NNISLCIECDDEEEIDRIFDKLSEGGQ-----W----FSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             ------------TTEEEEEEESSHHHHHHHHHHHHTTTE-----T----CCEEEEEE-TTS-EEEEE
T ss_pred             ---CCCC-----CcEEEEEEcCCHHHHHHHHHHHHcCCC-----c----cceeEEEEeCCCCEEEeC
Confidence               1111     22588888886   6666788888775     2    123467899999999885

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.23  E-value=0.0003  Score=53.98  Aligned_cols=131  Identities=18%  Similarity=0.312  Sum_probs=79.7

Q ss_pred             eeeeEEEEEeC--ChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeec-CCCcEEEEEeccC
Q 030857           12 RFPHFTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF-GKPATIELTHNWG   88 (170)
Q Consensus        12 ~~l~hv~i~v~--d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lel~~~~~   88 (170)
                      .+++|+...+.  .++.+.+||.+.|||.-.+..+.++-+  ..+..             ++.|.. .....+.+.-+..
T Consensus       177 ~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~--te~Sa-------------Lrs~vlan~~esi~mpinEp  241 (381)
T KOG0638|consen  177 NRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVH--TEYSA-------------LRSIVLANYEESIKMPINEP  241 (381)
T ss_pred             eehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhh--hHHHH-------------HHHHHHhcCCccEEEeccCC
Confidence            57899999999  788999999999999887765433211  11111             111110 1112222321111


Q ss_pred             CCCCC------CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCC---------C--------c-----
Q 030857           89 TESDP------DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---------G--------K-----  140 (170)
Q Consensus        89 ~~~~~------~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~---------~--------~-----  140 (170)
                      .+...      .+..++.|    .|++|+++.++||-.+.+.++++|.++...|..         .        .     
T Consensus       242 ~~G~k~ksQIqeyv~y~gG----~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~  317 (381)
T KOG0638|consen  242 APGKKKKSQIQEYVEYHGG----AGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLE  317 (381)
T ss_pred             CCCCccHHHHHHHHHhcCC----CceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHH
Confidence            11100      00112233    499999999999999999999999999877621         0        0     


Q ss_pred             cceEEEEECCCCCEEEEEecC
Q 030857          141 LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       141 ~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .-+++.-.|-.|+++.|+.+.
T Consensus       318 el~ILvD~De~gyLLQIFTKp  338 (381)
T KOG0638|consen  318 ELGILVDFDENGYLLQIFTKP  338 (381)
T ss_pred             HcCeEEecCCCcEEeeeeccc
Confidence            012445557779999998753

>PF15067 FAM124: FAM124 family

Probab=96.71  E-value=0.032  Score=41.34  Aligned_cols=106  Identities=12%  Similarity=0.049  Sum_probs=60.8

Q ss_pred             eeeEEEEEeC--ChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           13 FPHFTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        13 ~l~hv~i~v~--d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .+..++|.|+  |.+.+++||+-+|+-++....    .+|  +++..-.+                .+..++|....-+.
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k----~~F--C~F~lys~----------------~~~~iQlsLK~lp~  185 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQK----EDF--CFFTLYSQ----------------PGLDIQLSLKQLPP  185 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceee----CCc--EEEEEecC----------------CCeEEEEEeccCCC
Confidence            4567889998  999999999999998886642    223  22221110                14566665432221


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEE
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  157 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel  157 (170)
                      .   ..+.      +.-..-+.|+|.|+-+++--|-.- .   .+...+.    .-.+|||||.|-|
T Consensus       186 ~---~~p~------p~esavLqF~V~~igqLvpLLPnp-c---~PIS~~r----WqT~D~DGNkILL  235 (236)
T PF15067_consen  186 G---MSPE------PTESAVLQFRVEDIGQLVPLLPNP-C---SPISETR----WQTEDYDGNKILL  235 (236)
T ss_pred             C---CCcc------cccceEEEEEecchhhhcccCCCC-c---ccccCCc----ceeeCCCCCEecc
Confidence            1   1111      112357899999998775432111 1   0111222    2358999999854

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=96.49  E-value=0.099  Score=41.10  Aligned_cols=112  Identities=20%  Similarity=0.189  Sum_probs=65.8

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..++.+|.++|.|.+.+..=|-..|||+........  ...++ ..                      ..+-++-+..+.
T Consensus        20 ~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk--~v~l~-rQ----------------------Gdinlvvn~~~~   74 (363)
T COG3185          20 TDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRSK--AVTLY-RQ----------------------GDINLVVNAEPD   74 (363)
T ss_pred             CCceeEEEEecCCHHHHHHHHHHHhCcccccccccc--ceeEE-Ee----------------------CCEEEEEcCCCc
Confidence            458899999999994444444466999998764322  22222 22                      223333222221


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCC----------CCccceEEEEECCC
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD----------GGKLKGVAFIKDPD  151 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~----------~~~~~~~~~~~DPd  151 (170)
                      .  ....+-.  .-+.+..-++|+|+|...++++.++.|.+....+.          .+..+..+|+-|.+
T Consensus        75 s--~a~~f~~--~Hgps~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~  141 (363)
T COG3185          75 S--FAAEFLD--KHGPSACAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRY  141 (363)
T ss_pred             c--hhhHHHH--hcCCchheeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccC
Confidence            1  0000100  11225678999999999999999999996554332          12234577887877

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=96.47  E-value=0.0078  Score=39.29  Aligned_cols=54  Identities=28%  Similarity=0.276  Sum_probs=38.7

Q ss_pred             eEEEEEeCCHHHHHHHHHh-cCCeEeecCCC-CccceEEEEECCCC-CEEEEEecCc
Q 030857          109 GHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDD-YWIEIFDLKT  162 (170)
Q Consensus       109 ~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPdG-~~iel~~~~~  162 (170)
                      +|++|.|+|++++.+.+.+ .|+........ ...-+..++..++| ..|||+++..
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~   57 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLD   57 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESS
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCC
Confidence            5999999999999999998 89876543221 12223456677877 7899999754

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.20  E-value=0.024  Score=36.61  Aligned_cols=24  Identities=21%  Similarity=0.267  Sum_probs=11.6

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLG   36 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG   36 (170)
                      +.+..+.|.|.| +++.+||+++||
T Consensus         4 F~~e~i~LNV~d-~~~~~fy~~~f~   27 (101)
T PF14507_consen    4 FEFESIELNVPD-AKSQSFYQSIFG   27 (101)
T ss_dssp             EEE-EEEEEE-T--T---S--H---
T ss_pred             eEEEEEEEeCCC-hhHHHHHHhccc
Confidence            567889999999 889999999886

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.02  E-value=0.2  Score=33.90  Aligned_cols=48  Identities=15%  Similarity=0.158  Sum_probs=33.0

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   59 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~   59 (170)
                      ...+.|+++.|.|++++.+..++ .|.++.........+...+++..++
T Consensus        85 ~~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~DPd  132 (142)
T cd08353          85 ALGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRGPE  132 (142)
T ss_pred             CCCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEECCC
Confidence            34688999999999999999977 6888776322222234555666443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=94.47  E-value=0.25  Score=34.51  Aligned_cols=47  Identities=19%  Similarity=0.227  Sum_probs=33.9

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcce-EEEeeeccC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYED   59 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~   59 (170)
                      ..+.++||+|.|.|++.+.+-+++ .|.+......  ++.. .++|+-.++
T Consensus       112 ~prGfgHIci~V~di~sac~~lke-kGV~f~Kk~~--dGk~K~iaF~~dpD  159 (170)
T KOG2944|consen  112 EPRGFGHICIEVDDINSACERLKE-KGVRFKKKLK--DGKMKPIAFLHDPD  159 (170)
T ss_pred             CCCccceEEEEeCCHHHHHHHHHH-hCceeeecCC--CccccceeEEECCC
Confidence            336899999999999999999977 7999666543  3333 455555443

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.57  E-value=0.78  Score=29.68  Aligned_cols=55  Identities=20%  Similarity=0.250  Sum_probs=37.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC-CccceEEEEECCCCCEEEEEecC
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      +++|+++.|.|++++.+...+ .|.++...... ......+.+..+++..++++...
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~   59 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFP   59 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcC
Confidence            678999999999999999985 79988654321 11111233445677788887543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=93.41  E-value=0.64  Score=32.55  Aligned_cols=56  Identities=34%  Similarity=0.527  Sum_probs=39.2

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecC-----C---CC---------cc--ceEEEEECCCCCEEEEEecC
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKP-----D---GG---------KL--KGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~-----~---~~---------~~--~~~~~~~DPdG~~iel~~~~  161 (170)
                      .++.|+++.|.|+++..+..++ .|.++..++     .   .+         ..  -...++..++|..|||++..
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            3678999999999999999987 698775321     0   00         11  12455665778889999865

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=92.91  E-value=0.87  Score=29.55  Aligned_cols=56  Identities=18%  Similarity=0.311  Sum_probs=38.1

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC-C-ccceEEEEECC---CCCEEEEEecCc
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-G-KLKGVAFIKDP---DDYWIEIFDLKT  162 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~-~-~~~~~~~~~DP---dG~~iel~~~~~  162 (170)
                      ++.|+++.|+|+++..+..++ .|.+....... . .....+++.+.   .|..++|++...
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   62 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPD   62 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCC
Confidence            457999999999999999986 59887644321 1 11223445554   577888887543

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PLN02367 lactoylglutathione lyase

Probab=92.54  E-value=0.91  Score=34.04  Aligned_cols=55  Identities=16%  Similarity=0.124  Sum_probs=39.5

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      ..++|+++.|.|++++.+..++ .|.++........ ...++|+..++                  +..+||++.
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~P~~g~-~~riaFIkDPD------------------Gn~IEL~e~  222 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKKPNDGK-MKGIAFIKDPD------------------GYWIEIFDL  222 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeCCccCC-ceEEEEEECCC------------------CCEEEEEec
Confidence            3689999999999999999966 8999886432211 12455665443                  578999864

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.02  E-value=1.2  Score=29.31  Aligned_cols=52  Identities=19%  Similarity=0.338  Sum_probs=36.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHhc----CCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857          107 GFGHIGITVDDVYKACERFERL----GVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~~----G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      +++|+++.|+|+++..+...+.    |.+.......    ...|+...++..|+|++...
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~----~~~~~~~~~~~~i~l~~~~~   56 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED----GRSWRAGDGGTYLVLQQADG   56 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc----CceEEecCCceEEEEEeccc
Confidence            4579999999999999999886    8887665421    11333334567888876654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=91.40  E-value=1.7  Score=29.26  Aligned_cols=55  Identities=9%  Similarity=-0.039  Sum_probs=39.9

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      .+.|+++.|.|++++.+-.++ .|.++.............+++..++                  +..++++..
T Consensus        69 g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~------------------G~~ie~~~~  123 (136)
T cd08342          69 GVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYG------------------DSLHTLVDR  123 (136)
T ss_pred             ceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccC------------------CcEEEEEec
Confidence            578999999999999888866 6999886543323344566666544                  578999864

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=91.20  E-value=1.2  Score=29.00  Aligned_cols=52  Identities=29%  Similarity=0.336  Sum_probs=36.1

Q ss_pred             eEEEEEeCCHHHHHHHHHh-cCCeEeecCCCC--ccceEEEEECCCCCEEEEEecC
Q 030857          109 GHIGITVDDVYKACERFER-LGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       109 ~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~--~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .|+++.|+|+++..+...+ .|.+........  ......++. .+|..++|++..
T Consensus         2 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~l~l~~~~   56 (128)
T cd07249           2 DHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLG-LGNVQIELIEPL   56 (128)
T ss_pred             cEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEE-cCCEEEEEEEEC
Confidence            6999999999999999987 688776543221  111234554 467888888754

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PRK11478 putative lyase; Provisional

Probab=91.18  E-value=2.6  Score=27.59  Aligned_cols=29  Identities=7%  Similarity=0.001  Sum_probs=24.0

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeE
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLK   41 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~   41 (170)
                      ..+.|+++.|.|++++.+-..+ .|.++..
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~  102 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEA  102 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeec
Confidence            3578999999999999888866 6988754

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.96  E-value=1.2  Score=27.93  Aligned_cols=53  Identities=17%  Similarity=0.217  Sum_probs=35.7

Q ss_pred             ceEEEEEeCCHHHHHHHHH-hcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857          108 FGHIGITVDDVYKACERFE-RLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus       108 ~~hl~f~v~di~~~~~~l~-~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      ++|+++.|+|++++.+... -.|.+....+....  ...++...++..++|.....
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~i~l~~~~~   54 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF--PGAWLYAGDGPQLHLIEEDP   54 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC--CceEEEeCCCcEEEEEecCC
Confidence            3699999999999999987 55887665443221  12444555555788886544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=90.57  E-value=0.88  Score=28.15  Aligned_cols=45  Identities=13%  Similarity=0.065  Sum_probs=33.6

Q ss_pred             CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857          117 DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       117 di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ..+++.+++.+.|+++.....+....+.+...|.||+.+||.=..
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~vD~   74 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYVDP   74 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEEcC
Confidence            689999999999997765443222235688899999999996443

This is family M4 in the peptidase classification.

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=90.56  E-value=3.6  Score=29.70  Aligned_cols=32  Identities=9%  Similarity=0.064  Sum_probs=25.0

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEe
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~   42 (170)
                      .+..+|++++|.+.+.+.+|-+..+.+...-.
T Consensus        32 ~~~~DHialRvn~~~~A~~~~~~l~~~G~llS   63 (185)
T PF06185_consen   32 QYEIDHIALRVNSNETAERWKQALLQCGELLS   63 (185)
T ss_dssp             T-EEEEEEEE-S-HHHHHHHHHHHTTTEEEEE
T ss_pred             ccCCcEEEEecCCHHHHHHHHHHHHHhChhhh
Confidence            46789999999999999999999887776554

; PDB: 1K4N_A.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=90.00  E-value=0.45  Score=33.75  Aligned_cols=52  Identities=27%  Similarity=0.498  Sum_probs=28.5

Q ss_pred             ceEEEEEeCCHHHHHHHH-HhcCCeEeecCCC---CccceEEEEECCCCCEEEEEecCc
Q 030857          108 FGHIGITVDDVYKACERF-ERLGVEFAKKPDG---GKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus       108 ~~hl~f~v~di~~~~~~l-~~~G~~~~~~~~~---~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      +.|+.+.|+|++++.+++ ...|+.+......   |-....++|  +|| .|||+...+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f--~~~-YlEli~i~~   56 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPF--GDG-YLELIAIDP   56 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE---SSS-EEEEEEES-
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEee--CCc-eEEEEEeCC
Confidence            369999999999999999 7889988754322   222334555  667 999998543

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=89.93  E-value=2.1  Score=26.45  Aligned_cols=52  Identities=27%  Similarity=0.369  Sum_probs=38.1

Q ss_pred             EEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEecCcc
Q 030857          110 HIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  163 (170)
Q Consensus       110 hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  163 (170)
                      |+.+.|.|+++..+.+.+ .|.+........ .....++.++ +..|+|.+....
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~-~~~~~~~~~~-~~~i~l~~~~~~   53 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNG-GAEFAVLGLG-GTRLELFEGDEP   53 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccC-CEEEEEEecC-CceEEEecCCCC
Confidence            788999999999999998 899887665321 1234556554 788998886543

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=89.82  E-value=2.4  Score=29.49  Aligned_cols=51  Identities=12%  Similarity=0.175  Sum_probs=35.8

Q ss_pred             CceEEEEEeCCHHHHHHHHHhc-CCeEeecCCCCccceEEEEEC--CCCCEEEEEecC
Q 030857          107 GFGHIGITVDDVYKACERFERL-GVEFAKKPDGGKLKGVAFIKD--PDDYWIEIFDLK  161 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~~-G~~~~~~~~~~~~~~~~~~~D--PdG~~iel~~~~  161 (170)
                      |++|+++.|+|+++..+...+. |.++.....    ....++..  .++..|+|.+..
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~   54 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG----DRVRLEEGGGGPGAVVDVLEEP   54 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC----CEEEEEecCCCCCCEEEEEeCC
Confidence            4689999999999999999765 988765432    11223232  357889988753

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PRK10291 glyoxalase I; Provisional

Probab=89.69  E-value=3.5  Score=27.22  Aligned_cols=56  Identities=11%  Similarity=0.043  Sum_probs=37.4

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEee-ecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRL-DFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      .++|+++.|.|++++.+-.++ .|.++.... ..+......+++..++                  +..+||+...
T Consensus        65 ~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPd------------------G~~iel~~~~  121 (129)
T PRK10291         65 AYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPD------------------GYKIELIEEK  121 (129)
T ss_pred             CeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCC------------------CCEEEEEEcc
Confidence            688999999999999888866 788776431 1122222345555433                  5789998643

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.57  E-value=2.6  Score=26.82  Aligned_cols=52  Identities=19%  Similarity=0.142  Sum_probs=34.5

Q ss_pred             EEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCC--CEEEEEecC
Q 030857          110 HIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDD--YWIEIFDLK  161 (170)
Q Consensus       110 hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG--~~iel~~~~  161 (170)
                      |+++.|.|+++..+...+ .|.++............+++.++++  ..+++.+..
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   55 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAPPA   55 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeCCC
Confidence            789999999999999987 7998876532111122355666654  456665443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=89.40  E-value=2.6  Score=30.38  Aligned_cols=54  Identities=19%  Similarity=0.147  Sum_probs=37.5

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      .++|+++.|.|++++.+.+++ .|..+..... ......++|+..++                  +..+||+..
T Consensus       121 G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~p~-~~~~~~~~fi~DPd------------------G~~IEl~e~  174 (185)
T PLN03042        121 GFGHIGITVDDVYKACERFEK-LGVEFVKKPD-DGKMKGLAFIKDPD------------------GYWIEIFDL  174 (185)
T ss_pred             CccEEEEEcCCHHHHHHHHHH-CCCeEEeCCc-cCCceeEEEEECCC------------------CCEEEEEEC
Confidence            689999999999999999866 7988875322 11123345555433                  578998764

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.16  E-value=3.4  Score=26.65  Aligned_cols=52  Identities=19%  Similarity=0.263  Sum_probs=34.8

Q ss_pred             ceEEEEEeCCHHHHHHHHHhc-CCeEeec---CCCCccceEEEEECCCCCEEEEEecC
Q 030857          108 FGHIGITVDDVYKACERFERL-GVEFAKK---PDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       108 ~~hl~f~v~di~~~~~~l~~~-G~~~~~~---~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ++|+++.|+|+++..+...+. |.+....   +..+.  ...|+.-.+|..++|++..
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~   57 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGF--ESYFLSFDDGARLELMTRP   57 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCc--eEEEEecCCCcEEEEEcCc
Confidence            379999999999999998874 8876432   11111  2234443467889998643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=88.71  E-value=3.5  Score=26.47  Aligned_cols=53  Identities=21%  Similarity=0.307  Sum_probs=35.4

Q ss_pred             ceEEEEEeCCHHHHHHHHHhc-CCeEeecCCCCc-cceEEEEECCC---CCEEEEEec
Q 030857          108 FGHIGITVDDVYKACERFERL-GVEFAKKPDGGK-LKGVAFIKDPD---DYWIEIFDL  160 (170)
Q Consensus       108 ~~hl~f~v~di~~~~~~l~~~-G~~~~~~~~~~~-~~~~~~~~DPd---G~~iel~~~  160 (170)
                      +.|+++.|+|++++.+...+. |.++........ ....+++..++   +..+++.+.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~   58 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYN   58 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEec
Confidence            369999999999999999876 998775432111 11224444443   578888754

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=87.97  E-value=4  Score=28.16  Aligned_cols=55  Identities=20%  Similarity=0.350  Sum_probs=35.5

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC----CccceEEEEE-CCCCCEEEEEec
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG----GKLKGVAFIK-DPDDYWIEIFDL  160 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~----~~~~~~~~~~-DPdG~~iel~~~  160 (170)
                      .++.|+++.|+|+++..+...+ .|.++......    +......|+. +.+.+.+.+.+.
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~   68 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEG   68 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcC
Confidence            4789999999999999999976 69887543211    1112233433 445566766543

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=87.83  E-value=5  Score=25.19  Aligned_cols=31  Identities=13%  Similarity=0.172  Sum_probs=26.1

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEee
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRL   43 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~   43 (170)
                      -...|+.+.|.|+++..+...+ +|.+.....
T Consensus        55 ~~~~~~~~~v~dv~~~~~~l~~-~G~~~~~~~   85 (108)
T PF12681_consen   55 GGGFHLCFEVEDVDALYERLKE-LGAEIVTEP   85 (108)
T ss_dssp             SSEEEEEEEESHHHHHHHHHHH-TTSEEEEEE
T ss_pred             CceeEEEEEEcCHHHHHHHHHH-CCCeEeeCC
Confidence            4778999999999999999876 799876643

...

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=87.73  E-value=4.2  Score=26.34  Aligned_cols=48  Identities=23%  Similarity=0.340  Sum_probs=30.6

Q ss_pred             eEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEe
Q 030857          109 GHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus       109 ~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  159 (170)
                      .|+++.|+|+++..+-....|.++........   .+.+.-++|..+.+..
T Consensus         2 ~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~~~---~~~~~~~~~~~l~l~~   49 (122)
T cd07235           2 DAVGIVVADMAKSLDFYRRLGFDFPEEADDEP---HVEAVLPGGVRLAWDT   49 (122)
T ss_pred             ceEEEEeccHHHHHHHHHHhCceecCCcCCCC---cEEEEeCCCEEEEEEc
Confidence            58999999999999999878887643221111   1333445555555443

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=87.08  E-value=3  Score=27.12  Aligned_cols=53  Identities=19%  Similarity=0.293  Sum_probs=34.0

Q ss_pred             ceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857          108 FGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus       108 ~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      +.|+++.|+|++++.+..++ .|.++.........+..+++..+++..|+|.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   55 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEP   55 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEec
Confidence            46999999999999999985 588765432111111123333345677888764

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=85.68  E-value=4.5  Score=29.21  Aligned_cols=56  Identities=14%  Similarity=0.126  Sum_probs=38.6

Q ss_pred             CceEEEEEeC--CHHHHHHHHHh-cCCeEeecCC-CCc--cceEEEEECCCC-CEEEEEecCc
Q 030857          107 GFGHIGITVD--DVYKACERFER-LGVEFAKKPD-GGK--LKGVAFIKDPDD-YWIEIFDLKT  162 (170)
Q Consensus       107 g~~hl~f~v~--di~~~~~~l~~-~G~~~~~~~~-~~~--~~~~~~~~DPdG-~~iel~~~~~  162 (170)
                      .+.|+++.|+  |++++.+...+ .|.+...... ..+  ..+..++..|+| ..|+|.+...
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~   65 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPAS   65 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCC
Confidence            5689999999  99999999876 6988765332 111  123456677765 5688887543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=85.36  E-value=4.3  Score=26.05  Aligned_cols=53  Identities=30%  Similarity=0.481  Sum_probs=35.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHhc-CCeEeecCC---CCccceEEEEECCCCCEEEEEec
Q 030857          107 GFGHIGITVDDVYKACERFERL-GVEFAKKPD---GGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~~-G~~~~~~~~---~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      +++|+++.|.|+++..+...+. |.++.....   ........++...+ ..+++...
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~   57 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE-GHIELFLN   57 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS-SCEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc-cceeeeee
Confidence            3689999999999999999874 998876543   12222344454444 44666543

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.28  E-value=10  Score=26.34  Aligned_cols=43  Identities=7%  Similarity=0.079  Sum_probs=29.9

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeec
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY   57 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~   57 (170)
                      .+|++++|.+.+.+.+|.+..+.+...-....-.++ .++.+.+
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGR-PI~l~~L   44 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSENEINGR-PIALIKL   44 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhccccCCe-eEEEEEc
Confidence            589999999999999999988876655443222222 4444444

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.00  E-value=7.4  Score=25.14  Aligned_cols=50  Identities=16%  Similarity=0.291  Sum_probs=34.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCC-CCEEEEEecC
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPD-DYWIEIFDLK  161 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPd-G~~iel~~~~  161 (170)
                      .+.|+.+.|+|+++..+...+ .|.++.....     ..+++...+ +..|.|.+..
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~-----~~~~l~~~~~~~~l~l~~~~   53 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERTD-----STAVLGTGGKRPLLVLEEDP   53 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcCC-----CEEEEecCCCeEEEEEEeCC
Confidence            357999999999999999986 5988876531     124444443 4566666543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=84.91  E-value=8.4  Score=25.38  Aligned_cols=51  Identities=16%  Similarity=0.300  Sum_probs=34.9

Q ss_pred             ceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECC--CCCEEEEEecC
Q 030857          108 FGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDP--DDYWIEIFDLK  161 (170)
Q Consensus       108 ~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DP--dG~~iel~~~~  161 (170)
                      +.|+.+.|+|+++..+...+ .|.++......   ....|+..+  .+..+.+++..
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~l~l~~~~   55 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL---GGLVFLSRDPDEHHQIALITGR   55 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccC---CcEEEEEecCCCceEEEEEecC
Confidence            47999999999999999987 79887654321   123454433  34567776553

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=83.45  E-value=8.9  Score=24.50  Aligned_cols=30  Identities=27%  Similarity=0.458  Sum_probs=25.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecC
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKP  136 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~  136 (170)
                      ++.|+.+.|+|+++..+..++ .|.++....
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~   33 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRFG   33 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeeccc
Confidence            678999999999999999988 698877554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=83.43  E-value=6.4  Score=26.21  Aligned_cols=30  Identities=13%  Similarity=-0.062  Sum_probs=24.5

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHh--cCCEEeE
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRV--LGMSLLK   41 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~--lG~~~~~   41 (170)
                      .+++|+++.|.|++...+++..+  .|+++..
T Consensus        61 ~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~   92 (134)
T cd08360          61 AGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGW   92 (134)
T ss_pred             CcceEEEEEeCCHHHHHHHHHHHHHcCCcccc
Confidence            47899999999999999888766  5776553

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=83.27  E-value=9.5  Score=24.35  Aligned_cols=29  Identities=21%  Similarity=0.426  Sum_probs=24.8

Q ss_pred             CceEEEEEeCCHHHHHHHHHhcCCeEeec
Q 030857          107 GFGHIGITVDDVYKACERFERLGVEFAKK  135 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~~G~~~~~~  135 (170)
                      ++.|+++.|.|+++..+.....|.++...
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~~   30 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVREE   30 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEee
Confidence            56899999999999999998889887643

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PRK11700 hypothetical protein; Provisional

Probab=82.97  E-value=15  Score=26.53  Aligned_cols=46  Identities=7%  Similarity=0.050  Sum_probs=31.7

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeec
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY   57 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~   57 (170)
                      .+..+|++++|.+.+.+.+|-+..+.+...-....-.++ .++.+.+
T Consensus        37 ~~~~DHialR~n~~~tAe~w~~~l~~~G~llSen~INGR-PI~l~~L   82 (187)
T PRK11700         37 QLEADHIALRCNQNETAERWRQGFLQCGELLSENIINGR-PICLFEL   82 (187)
T ss_pred             cccCcEEEEeeCCHHHHHHHHHHHHHhchhhhccccCCe-eEEEEEc
Confidence            357899999999999999999888866555432222222 4444444

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=82.53  E-value=8.2  Score=24.73  Aligned_cols=27  Identities=11%  Similarity=0.223  Sum_probs=22.2

Q ss_pred             eEEEEEeCChHHHHHHHHHhcCCEEeEe
Q 030857           15 HFTMFRIKDPKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        15 ~hv~i~v~d~~~s~~FY~~~lG~~~~~~   42 (170)
                      .|+.+.|.|+++..+...+ .|.++...
T Consensus        68 ~~~~~~v~did~~~~~l~~-~G~~~~~~   94 (119)
T cd08359          68 LILNFEVDDVDAEYERLKA-EGLPIVLP   94 (119)
T ss_pred             EEEEEEECCHHHHHHHHHh-cCCCeeec
Confidence            3899999999999999877 68876543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=81.93  E-value=13  Score=25.21  Aligned_cols=29  Identities=10%  Similarity=0.034  Sum_probs=24.7

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEe
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~   42 (170)
                      .+.|+++.|.|++++.+...+ .|.++...
T Consensus        86 g~~hi~f~v~dld~~~~~l~~-~G~~~~~~  114 (150)
T TIGR00068        86 GFGHIAIGVDDVYKACERVRA-LGGNVVRE  114 (150)
T ss_pred             ceeEEEEecCCHHHHHHHHHH-cCCccccC
Confidence            678999999999999999976 78877653

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PF02208 Sorb: Sorbin homologous domain; InterPro: IPR003127 Sorbin is an active peptide present in the digestive tract, where it has pro-absorptive and anti-secretory effects in different parts of the intestine, including the ability to decrease VIP (vasoactive intestinal peptide) and cholera toxin-induced secretion

Probab=81.81  E-value=0.83  Score=24.79  Aligned_cols=23  Identities=9%  Similarity=0.128  Sum_probs=19.7

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhc
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVL   35 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~l   35 (170)
                      ..+-.+|.+++++++..||+.-|
T Consensus        11 p~De~giP~~~vd~~kDWYktMF   33 (47)
T PF02208_consen   11 PVDESGIPLSNVDRPKDWYKTMF   33 (47)
T ss_pred             ccccCCCccccccchhHHHHHHH
Confidence            45678888899999999999865

It is expressed in some intestinal and pancreatic endocrine tumours in humans []. Sorbin-homology domains are found in adaptor proteins such as vinexin, CAP/ponsin and argBP2, which regulate various cellular functions, including cell adhesion, cytoskeletal organisation, and growth factor signalling []. In addition to the sorbin domain, these proteins contain three SH3 (src homology 3) domains. The sorbin homology domain mediates the interaction of vinexin and CAP with flotillin, which is crucial for the localisation of SH3-binding proteins to the lipid raft, a region of the plasma membrane rich in cholesterol and sphingolipids that acts to concentrate certain signalling molecules. The sorbin homology domain of adaptor proteins may mediate interactions with the lipid raft that are crucial to intracellular communication [].

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=80.49  E-value=12  Score=24.31  Aligned_cols=29  Identities=17%  Similarity=0.330  Sum_probs=24.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeec
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKK  135 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~  135 (170)
                      .+.|+++.|+|+++..+...+ .|.++...
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~   31 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDR   31 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccC
Confidence            457999999999999999977 59887654

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=80.07  E-value=15  Score=24.39  Aligned_cols=54  Identities=20%  Similarity=0.330  Sum_probs=34.0

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCC-c-cceEEEEECCCCCEEEEEecC
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGG-K-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~-~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ++.|+++.|+|+++..+...+ .|.+........ . .+...++. -++..|++.+..
T Consensus         4 ~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~   60 (131)
T cd08364           4 GLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFL-IGGLWIAIMEGD   60 (131)
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEE-cCCeEEEEecCC
Confidence            678999999999999999877 688765443211 1 11111222 235677777543

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	170
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		2e-57
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		1e-53
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		1e-53
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		2e-53
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		2e-19
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		4e-13

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score =  217 bits (553), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 101/150 (67%), Positives = 119/150 (79%), Gaps = 1/150 (0%)
Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF 
Sbjct: 35  TMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFS 94
Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKP
Sbjct: 95  RKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 153
Query: 137 DGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
           D GK+KG+AFI+DPD YWIEI +   I  I
Sbjct: 154 DDGKMKGLAFIQDPDGYWIEILNPNKIATI 183

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score =  205 bits (521), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 93/143 (65%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   
Sbjct: 34  TMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALS 93
Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKP
Sbjct: 94  RKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 152
Query: 137 DGGKLKGVAFIKDPDDYWIEIFD 159
           D GK+KG+AFI+DPD YWIEI +
Sbjct: 153 DDGKMKGLAFIQDPDGYWIEILN 175

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score =  205 bits (521), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 93/143 (65%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   
Sbjct: 38  TMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALS 97
Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKP
Sbjct: 98  RKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 156
Query: 137 DGGKLKGVAFIKDPDDYWIEIFD 159
           D GK+KG+AFI+DPD YWIEI +
Sbjct: 157 DDGKMKGLAFIQDPDGYWIEILN 179

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score =  204 bits (518), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 92/143 (64%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
           TM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   
Sbjct: 34  TMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALS 93
Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 136
           + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKP
Sbjct: 94  RKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 152
Query: 137 DGGKLKGVAFIKDPDDYWIEIFD 159
           D GK+KG+AFI+DPD YWI+I +
Sbjct: 153 DDGKMKGLAFIQDPDGYWIQILN 175

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 28/156 (17%)
Query: 12  RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 71
           R  H TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY      P       
Sbjct: 2   RLLH-TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY-----GPET----- 50
Query: 72  VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 131
                + A IELT+NWG +       Y  G +    +GHI ++VD+  +ACE+  + G  
Sbjct: 51  -----EEAVIELTYNWGVDK------YELGTA----YGHIALSVDNAAEACEKIRQNGGN 95
Query: 132 FAKK--PDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 165
             ++  P  G    +AF++DPD Y IE+ + K  G+
Sbjct: 96  VTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR 131

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 29/154 (18%)
Query: 10  NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVD 69
           ++R  H TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY    S+      
Sbjct: 6   SRRMLH-TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSS------ 58
Query: 70  RTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG 129
                      +ELT+N+G  S                +GHI I V+DV +      +  
Sbjct: 59  ---------TVLELTYNYGVTS----------YKHDEAYGHIAIGVEDVKELVADMRKHD 99
Query: 130 VEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 163
           V    + + G +   AF+ DPD Y+IE+ + KT+
Sbjct: 100 VPIDYEDESGFM---AFVVDPDGYYIELLNEKTM 130

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	170
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	4e-65
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	9e-53
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	4e-50
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	2e-37
2p25_A	126	Glyoxalase family protein; structural genomics, MC	5e-26
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	1e-23
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	2e-23
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	1e-21
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	8e-20
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-18
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	2e-16
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	1e-15
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-15
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	1e-11
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-11
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	2e-11
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
3ghj_A	141	Putative integron gene cassette protein; integron	4e-10
3huh_A	152	Virulence protein STM3117; structural genomics, ny	7e-10
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	8e-10
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	2e-09
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	5e-09
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-08
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	1e-08
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	1e-08
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-08
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	2e-08
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	3e-08
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	6e-08
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	1e-07
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	2e-07
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	2e-07
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	3e-07
1nki_A	135	Probable fosfomycin resistance protein; potassium	7e-07
2i7r_A	118	Conserved domain protein; structural genomics cons	7e-07
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	9e-07
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	1e-06
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-06
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	2e-06
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-06
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	3e-06
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	3e-06
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	7e-06
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	1e-05
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	3e-05
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	7e-05
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	9e-05
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	1e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	8e-04

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  196 bits (499), Expect = 4e-65
 Identities = 102/163 (62%), Positives = 121/163 (74%), Gaps = 2/163 (1%)

Query: 4   PTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASA 63
           P  ++ +      TM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    
Sbjct: 23  PDPSTKDFLLQQ-TMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDI 81

Query: 64  PADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACE 123
           P D  ++T WTF + AT+ELTHNWGTE D     YHNGNS+PRGFGHIGI V DVY AC+
Sbjct: 82  PKDKSEKTAWTFSRKATLELTHNWGTEDDETQS-YHNGNSDPRGFGHIGIAVPDVYSACK 140

Query: 124 RFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
           RFE LGV+F KKPD GK+KG+AFI+DPD YWIEI +   I  I
Sbjct: 141 RFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKIATI 183

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  163 bits (414), Expect = 9e-53
 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 28/156 (17%)

Query: 12  RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 71
           R  H TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY              
Sbjct: 2   RLLH-TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETE--------- 51

Query: 72  VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 131
                  A IELT+NWG +                 +GHI ++VD+  +ACE+  + G  
Sbjct: 52  ------EAVIELTYNWGVDK----------YELGTAYGHIALSVDNAAEACEKIRQNGGN 95

Query: 132 FAK--KPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 165
             +   P  G    +AF++DPD Y IE+ + K  G+
Sbjct: 96  VTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR 131

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  157 bits (398), Expect = 4e-50
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 29/150 (19%)

Query: 10  NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVD 69
           ++R  H TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY    S+      
Sbjct: 6   SRRMLH-TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSST----- 59

Query: 70  RTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG 129
                      +ELT+N+G  S      Y +       +GHI I V+DV +      +  
Sbjct: 60  ----------VLELTYNYGVTS------YKHDE----AYGHIAIGVEDVKELVADMRKHD 99

Query: 130 VEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 159
           V    + + G +   AF+ DPD Y+IE+ +
Sbjct: 100 VPIDYEDESGFM---AFVVDPDGYYIELLN 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  124 bits (314), Expect = 2e-37
 Identities = 31/150 (20%), Positives = 51/150 (34%), Gaps = 22/150 (14%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
           K   H     + D   S +FY   LG  +++    P+       L   D           
Sbjct: 4   KAVHH-VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDI---------- 52

Query: 71  TVWTFGKPATIELTHNWGTESD-PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG 129
                     +E+  N  T+S+        +   E  G  H+   V+DV  + +    LG
Sbjct: 53  ---------ELEIFGNKLTDSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG 103

Query: 130 VEFAKKP-DGGKLKGVAFIKDPDDYWIEIF 158
           +   +   D    K +AF  DPD   +E+ 
Sbjct: 104 IRVEEVRYDDYTGKKMAFFFDPDGLPLELH 133

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 95.2 bits (237), Expect = 5e-26
 Identities = 25/149 (16%), Positives = 43/149 (28%), Gaps = 28/149 (18%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
           K   H       + + + +FY   LG  +L+    PE       L               
Sbjct: 4   KEIHH-VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ---------- 52

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
                     +E+  +    + P          E  G  H+   V+ + +        G+
Sbjct: 53  ---------ELEIFISDQFPARPS-------YPEALGLRHLAFKVEHIEEVIAFLNEQGI 96

Query: 131 EFAKKP-DGGKLKGVAFIKDPDDYWIEIF 158
           E      D    K + F  DPD   +E+ 
Sbjct: 97  ETEPLRVDDFTGKKMTFFFDPDGLPLELH 125

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 89.0 bits (221), Expect = 1e-23
 Identities = 31/152 (20%), Positives = 54/152 (35%), Gaps = 27/152 (17%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
            R  H     + D + +  FY  +LG  + + +  PE   S+ F+   +T          
Sbjct: 4   GRLNH-VAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNT---------- 52

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
                     +EL H  G +S           ++  G  HI I VD++  A    ++  +
Sbjct: 53  ---------KMELLHPLGLDSPIA---GFLQKNKAGGMHHICIEVDNINAAVMDLKKKKI 100

Query: 131 EFAKKP--DGGKLKGVAFI--KDPDDYWIEIF 158
               +    G   K V F+  KD     +E+ 
Sbjct: 101 RSLSEEVKIGAHGKPVIFLHPKDCGGVLVELE 132

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 89.1 bits (221), Expect = 2e-23
 Identities = 29/151 (19%), Positives = 43/151 (28%), Gaps = 28/151 (18%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
            +  H     +   K  L FY   L + LL   D P     + FL   ++          
Sbjct: 7   NKLDH-IGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGES---------- 55

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
                     IEL      ES         G        HI I V  + +  +  +  GV
Sbjct: 56  ---------KIELLEPLSEESPIAKFIQKRGEG----IHHIAIGVKSIEERIQEVKENGV 102

Query: 131 EFAKKP--DGGKLKGVAFI--KDPDDYWIEI 157
           +        G +   VAF+  +       E 
Sbjct: 103 QMINDEPVPGARGAQVAFLHPRSARGVLYEF 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 84.0 bits (208), Expect = 1e-21
 Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 28/151 (18%)

Query: 10  NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVD 69
           + +  H   + +K+   +L  + R+  +   + +     K  + F+              
Sbjct: 5   SLKVHH-IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGY--------- 54

Query: 70  RTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG 129
                      +EL    G +S P  K    G        HI   V+D+ K+ E   ++G
Sbjct: 55  ----------RVELVAPDGEDS-PINKTIKKG----STPYHICYEVEDIQKSIEEMSQIG 99

Query: 130 VEFAKKP---DGGKLKGVAFIKDPDDYWIEI 157
               KK         + VAF+   D   IE+
Sbjct: 100 YTLFKKAEIAPAIDNRKVAFLFSTDIGLIEL 130

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 79.5 bits (196), Expect = 8e-20
 Identities = 20/145 (13%), Positives = 38/145 (26%), Gaps = 37/145 (25%)

Query: 17  TMFRI--KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
            + R+   D   +L+FY  +L   +  R + P+    L  +      +   + +      
Sbjct: 8   ILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIAGSEEAL------ 61

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 134
                                        +P         VD + K     E  G E  +
Sbjct: 62  -----------------------------KPFRNTQATFLVDSLDKFKTFLEENGAEIIR 92

Query: 135 KPDGGKLKGVAFIKDPDDYWIEIFD 159
            P          ++  D   IE  +
Sbjct: 93  GPSKVPTGRNMTVRHSDGSVIEYVE 117

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 75.7 bits (186), Expect = 2e-18
 Identities = 27/147 (18%), Positives = 45/147 (30%), Gaps = 30/147 (20%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
                   + +    FY    G +     +     F+ YFL +ED               
Sbjct: 5   EHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDG-------------- 50

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVE 131
               A +E+                    E  G+ HI I+    + V +  E+  + G  
Sbjct: 51  ----ARLEIMSRTDVTGKT--------TGENLGWAHIAISTGTKEAVDELTEKLRQDGFA 98

Query: 132 FAKKP-DGGKLKGVAFIKDPDDYWIEI 157
            A +P   G     + + DP+   IEI
Sbjct: 99  IAGEPRMTGDGYYESVVLDPEGNRIEI 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 71.4 bits (175), Expect = 2e-16
 Identities = 23/144 (15%), Positives = 39/144 (27%), Gaps = 21/144 (14%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
               ++D + S  FY  +LG+  L   + P     L                    +   
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTEL------------VASGKVANFITP 70

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY--KACERFERLGVEFAK 134
               ++L                          H+   +D     +A        +  A 
Sbjct: 71  DGTILDLFGEPELSPPDPNPEK-----TFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAH 125

Query: 135 KP-DGGKLKGVAFIKDPDDYWIEI 157
            P      +GV +  DPD + IEI
Sbjct: 126 GPVTRPTGRGV-YFYDPDGFMIEI 148

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 69.1 bits (169), Expect = 1e-15
 Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 12/148 (8%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
            R  +     ++    ++ F+   +G++L  R +  E +++    G        A     
Sbjct: 10  LRMDN-VSIVVESLDNAISFFEE-IGLNLEGRANV-EGEWAGRVTGLGSQCVEIA----- 61

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
            + T    + IEL+      +  D +          G+  +  TV+D+ +   R  + G 
Sbjct: 62  MMVTPDGHSRIELSRFLTPPTIADHR---TAPVNALGYLRVMFTVEDIDEMVSRLTKHGA 118

Query: 131 EFAKKP-DGGKLKGVAFIKDPDDYWIEI 157
           E   +         + +I+  +   I +
Sbjct: 119 ELVGEVVQYENSYRLCYIRGVEGILIGL 146

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 67.5 bits (164), Expect = 5e-15
 Identities = 23/144 (15%), Positives = 40/144 (27%), Gaps = 22/144 (15%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
           H T   + D   +  FY+  LG  +   +     ++           +            
Sbjct: 28  HLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQ----------- 76

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 134
                 + L  +      P  +          G       VDD+    ER   LGV F +
Sbjct: 77  ------LLLEPSSHAAVTPFKEALVAD-----GIPAASFAVDDIAAEYERLSALGVRFTQ 125

Query: 135 KPDGGKLKGVAFIKDPDDYWIEIF 158
           +P        A + D     I++ 
Sbjct: 126 EPTDMGPVVTAILDDTCGNLIQLM 149

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 59.0 bits (143), Expect = 1e-11
 Identities = 23/146 (15%), Positives = 40/146 (27%), Gaps = 29/146 (19%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
             T     D   +  FY  V G+ ++ +                         +   +  
Sbjct: 10  METALYADDLDAAEAFYRDVFGLEMVLK-------------------------LPGQLVF 44

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVE 131
           F     + L  +    S  D       +    G GH     D   +V +   RFE L + 
Sbjct: 45  FKCGRQMLLLFDPQESSRADANNPIPRH-GAVGQGHFCFYADDKAEVDEWKTRFEALEIP 103

Query: 132 FAKKPDGGKLKGVAFIKDPDDYWIEI 157
                         +I+DP    +E+
Sbjct: 104 VEHYHRWPNGSYSVYIRDPAGNSVEV 129

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 57.6 bits (139), Expect = 2e-11
 Identities = 20/166 (12%), Positives = 41/166 (24%), Gaps = 35/166 (21%)

Query: 1   MKLPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT 60
            +  +  +   R               + FY   L +  +         +     G    
Sbjct: 3   KRFSSFQAAQIRIAR----PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA 57

Query: 61  ASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD--- 117
                               +E T   G  + P           P     +   V +   
Sbjct: 58  -----------------DYHLEFTQYEGGSTAPV----------PHPDSLLVFYVPNAVE 90

Query: 118 VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 163
           +     + + +G +  +  +     G   I+DPD + I   + K I
Sbjct: 91  LAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKGI 136

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 57.1 bits (138), Expect = 2e-11
 Identities = 15/139 (10%), Positives = 34/139 (24%), Gaps = 35/139 (25%)

Query: 19  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 78
             +   + +  FY   +GM  + + +  + +   +F           +            
Sbjct: 18  APVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQ----------- 66

Query: 79  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG 138
                                  N  P    H    V  + +  +   + G+E       
Sbjct: 67  -----------------------NFNPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDHAR 103

Query: 139 GKLKGVAFIKDPDDYWIEI 157
             +    ++ DP    IE 
Sbjct: 104 PDVIRF-YVSDPFGNRIEF 121

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 57.7 bits (139), Expect = 2e-11
 Identities = 22/150 (14%), Positives = 34/150 (22%), Gaps = 35/150 (23%)

Query: 18  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 77
                D  VS  F+  VLG  +    + P+ +F    L   D                  
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVM-------------LEG 54

Query: 78  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 136
            A        G    P   G            +    V D+    +R      +      
Sbjct: 55  IAGKSRKWLSGDLEFPLGSGV-----------NFQWDVIDIEPLYQRVNESAADSIYLAL 103

Query: 137 ------DGGKLKGV--AFIKDPDDYWIEIF 158
                  G  +       ++ PD Y     
Sbjct: 104 ESKSYQCGDSIATQKQFMVQTPDGYLFRFC 133

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 57.4 bits (139), Expect = 2e-11
 Identities = 22/147 (14%), Positives = 40/147 (27%), Gaps = 32/147 (21%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
           H ++  ++D  +S  +Y+ +L    L R       F                        
Sbjct: 8   HVSL-TVRDLDISCRWYTEILDWKELVRGRGDTTSF--AHGVLPGG-------------- 50

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVE 131
                   +           F           G  H+  +V    D+    ER  + G  
Sbjct: 51  -----LSIVLREHDGGGTDLFDETR------PGLDHLSFSVESMTDLDVLEERLAKAGAA 99

Query: 132 FAKKPDGGKLKGVAFIKDPDDYWIEIF 158
           F    +      +AF +D D+  +E  
Sbjct: 100 FTPTQELPFGWILAF-RDADNIALEAM 125

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 53.8 bits (130), Expect = 4e-10
 Identities = 17/146 (11%), Positives = 45/146 (30%), Gaps = 40/146 (27%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
                ++K+ + S  FY+ +LG            +++  ++                   
Sbjct: 30  FEVAVKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVS------------------ 69

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEF 132
            G+   + L      + + +               H    V+  ++    +  E  GV  
Sbjct: 70  -GRAGMVVL------QEEKENWQQQ----------HFSFRVEKSEIEPLKKALESKGVSV 112

Query: 133 AKKPDGGKLKGVA-FIKDPDDYWIEI 157
               +   ++ V+ +  DP+ + +E 
Sbjct: 113 HGPVNQEWMQAVSLYFADPNGHALEF 138

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 53.9 bits (129), Expect = 7e-10
 Identities = 30/151 (19%), Positives = 48/151 (31%), Gaps = 36/151 (23%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
            R  H  +  + D   ++ FY  VLG S +    F + + +L F                
Sbjct: 22  DRIDHLVL-TVSDISTTIRFYEEVLGFSAVT---FKQNRKALIFGAQ------------- 64

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
                     I L H    E +P           P       IT   +        + G+
Sbjct: 65  ---------KINL-HQQEMEFEP-----KASRPTPGSADLCFITSTPINDVVSEILQAGI 109

Query: 131 EFAKKP---DGGKLKGVA-FIKDPDDYWIEI 157
              + P    G   + ++ +I+DPD   IEI
Sbjct: 110 SIVEGPVERTGATGEIMSIYIRDPDGNLIEI 140

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 53.5 bits (128), Expect = 8e-10
 Identities = 31/152 (20%), Positives = 52/152 (34%), Gaps = 38/152 (25%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
           +R  H  M  +K  K +  FYS++LGM   + + F E + +L F                
Sbjct: 26  RRLDHIVM-TVKSIKDTTMFYSKILGM---EVMTFKEDRKALCFGDQ------------- 68

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
                       L H  G E +P        +  P       IT   + +  +  +   V
Sbjct: 69  ---------KFNL-HEVGKEFEP-----KAAHPVPGSLDICLITEVPLEEMIQHLKACDV 113

Query: 131 EFAKKP-----DGGKLKGVAFIKDPDDYWIEI 157
              + P       G +  + + +DPD   IE+
Sbjct: 114 PIEEGPVPRTGAKGPIMSI-YFRDPDRNLIEV 144

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 52.6 bits (126), Expect = 2e-09
 Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 36/148 (24%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
              +  ++D   S  FY   LG+ +L+        F L+  G+                 
Sbjct: 10  VNPIPFVRDINRSKSFYRDRLGLKILEDFG----SFVLFETGF---------------AI 50

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF-- 132
               +  E      +++   +               +     DV  A +      VE   
Sbjct: 51  HEGRSLEETIWRTSSDAQEAYGR---------RNMLLYFEHADVDAAFQDIAP-HVELIH 100

Query: 133 --AKKPDGGKLKGVAFIKDPDDYWIEIF 158
              ++  G +   V    DPD + IE+ 
Sbjct: 101 PLERQAWGQR---VFRFYDPDGHAIEVG 125

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 51.3 bits (123), Expect = 5e-09
 Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 39/149 (26%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
           +   H     + D + S+ F+  +LG++L  R +        Y    +            
Sbjct: 3   QSLNH-LTLAVSDLQKSVTFWHELLGLTLHARWNT-----GAYLTCGDLW---------- 46

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERL 128
                     + L+++   +  P          +   + H   TV  +D     +R E+ 
Sbjct: 47  ----------VCLSYDEARQYVP---------PQESDYTHYAFTVAEEDFEPLSQRLEQA 87

Query: 129 GVEFAKKPDGGKLKGVAFIKDPDDYWIEI 157
           GV   K+          +  DPD + +E+
Sbjct: 88  GVTIWKQNKSEG-ASF-YFLDPDGHKLEL 114

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 50.1 bits (119), Expect = 1e-08
 Identities = 22/142 (15%), Positives = 37/142 (26%), Gaps = 23/142 (16%)

Query: 22  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 81
            D   +  +Y    G   L R + PE       +      +                  +
Sbjct: 18  PDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHM-------------TQV 64

Query: 82  ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF----AKKPD 137
           ++      ES        +         H+   VDD+          GV+      K   
Sbjct: 65  QVMAPLNDESTVAKWLAKHNGRAG--LHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGT 122

Query: 138 GGKLKGVAFI--KDPDDYWIEI 157
           GG    + F+  K      IE+
Sbjct: 123 GGNR--INFMHPKSGKGVLIEL 142

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 50.1 bits (119), Expect = 1e-08
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 36/148 (24%)

Query: 14  PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 73
           P FT+  + +P  S  FY  +LG+  ++                             +++
Sbjct: 26  PDFTILYVDNPPASTQFYKALLGVDPVESSP------------------------TFSLF 61

Query: 74  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGV 130
                  + L      E      G         G G +   V++   V +    ++  GV
Sbjct: 62  VLANGMKLGLWSRHTVEPKASVTG---------GGGELAFRVENDAQVDETFAGWKASGV 112

Query: 131 EFAKKPDGGKLKGVAFIKDPDDYWIEIF 158
              ++P   +        DPD + + ++
Sbjct: 113 AMLQQPAKMEFGYTFTAADPDSHRLRVY 140

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 48.9 bits (117), Expect = 2e-08
 Identities = 19/146 (13%), Positives = 34/146 (23%), Gaps = 44/146 (30%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
               + D   + +F  +  G++                                      
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA-------------------------FAVMR 41

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFA 133
                 LT   G E              P+ F H+G   +    V K  +R +  G    
Sbjct: 42  DNDGFILTLMKGKEVQY-----------PKTF-HVGFPQESEEQVDKINQRLKEDGFLVE 89

Query: 134 KKPDGGKLKGVAF-IKDPDDYWIEIF 158
                       F ++ P  + IE+ 
Sbjct: 90  PPKHAH---AYTFYVEAPGGFTIEVM 112

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 49.2 bits (117), Expect = 2e-08
 Identities = 23/148 (15%), Positives = 38/148 (25%), Gaps = 35/148 (23%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
                     +  L FY R++G        F   K      G E   +            
Sbjct: 8   TSITINTSHLQGMLGFY-RIIG------FQFTASKVDK---GSEVHRAVHNG-------- 49

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL-GVEFA 133
                   L                N          +G  + D+ K  +   ++ G    
Sbjct: 50  ----VEFSLY------------SIQNPQRSQIPSLQLGFQITDLEKTVQELVKIPGAMCI 93

Query: 134 KKPDGGKLKGVAFIKDPDDYWIEIFDLK 161
             P        A + DPD + IE+ +L+
Sbjct: 94  LDPTDMPDGKKAIVLDPDGHSIELCELE 121

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 49.2 bits (117), Expect = 3e-08
 Identities = 29/152 (19%), Positives = 45/152 (29%), Gaps = 38/152 (25%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
               H     + D   + +FY +VLGM     + F   + +L F   +            
Sbjct: 9   SHLDHLV-LTVADIPTTTNFYEKVLGMKA---VSFGAGRIALEFGHQKIN---------- 54

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
                         H  G E +P        N          IT   +  A +  E  GV
Sbjct: 55  -------------LHQLGNEFEP-----KAQNVRVGSADLCFITDTVLSDAMKHVEDQGV 96

Query: 131 EFAKKP-----DGGKLKGVAFIKDPDDYWIEI 157
              + P       G +    + +DPD   IE+
Sbjct: 97  TIMEGPVKRTGAQGAITSF-YFRDPDGNLIEV 127

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 48.7 bits (116), Expect = 6e-08
 Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 14/141 (9%)

Query: 22  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 81
           +D + SL  Y+   G+   +     +   +            P     +  +    P  +
Sbjct: 28  RDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGR-----PTKARAKLAFFELGPLQL 82

Query: 82  ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-KKPDGGK 140
           EL       S   ++ + + N E  G  HI   V D+ +  E   R G++   K    G 
Sbjct: 83  ELIEPDENPST--WREFLDKNGE--GIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEG- 137

Query: 141 LKGVAFI--KDPDDYWIEIFD 159
               A+I         IE+ +
Sbjct: 138 -GRYAYIDTLRALKVMIELLE 157

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 47.6 bits (113), Expect = 1e-07
 Identities = 24/148 (16%), Positives = 45/148 (30%), Gaps = 35/148 (23%)

Query: 18  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 77
              +   + S+ F+  +LG                  LGYED             +  GK
Sbjct: 25  EINVDHLEESIAFWDWLLG-----------------ELGYEDYQ----SWSRGKSYKHGK 63

Query: 78  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAK 134
                 T+    +++  F+          G  H+       + V +  ++ +  G     
Sbjct: 64  ------TYLVFVQTEDRFQTPTFHRKRT-GLNHLAFHAASREKVDELTQKLKERGDPILY 116

Query: 135 KP----DGGKLKGVAFIKDPDDYWIEIF 158
           +      GG      F +DP+   +EI 
Sbjct: 117 EDRHPFAGGPNHYAVFCEDPNRIKVEIV 144

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 46.8 bits (111), Expect = 2e-07
 Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 31/144 (21%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
               F ++D +        V     +        +FSL    +                 
Sbjct: 6   SHMTFIVRDLERMTRILEGVFDAREVYA--SDTEQFSLSREKFFL--------------- 48

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 134
                 I +    G +     + Y++            I   D  +  ER  +LG++   
Sbjct: 49  ---IGDIWVAIMQGEKLAE--RSYNH--------IAFKIDDADFDRYAERVGKLGLDMRP 95

Query: 135 KPDGGKLKGVA-FIKDPDDYWIEI 157
                + +G + +  D D++  E+
Sbjct: 96  PRPRVEGEGRSIYFYDDDNHMFEL 119

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 46.6 bits (110), Expect = 3e-07
 Identities = 20/148 (13%), Positives = 41/148 (27%), Gaps = 36/148 (24%)

Query: 14  PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 73
           P+  +F +K+P  S +FY  +L    ++                              ++
Sbjct: 7   PNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------------------------TFAMF 42

Query: 74  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGV 130
                  + L      E      G         G   +   V   + V +   ++    +
Sbjct: 43  VMKTGLRLGLWAQEEIEPKAHQTG---------GGMELSFQVNSNEMVDEIHRQWSDKEI 93

Query: 131 EFAKKPDGGKLKGVAFIKDPDDYWIEIF 158
              + P            DPD++ + IF
Sbjct: 94  SIIQPPTQMDFGYTFVGVDPDEHRLRIF 121

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 45.2 bits (107), Expect = 7e-07
 Identities = 25/147 (17%), Positives = 36/147 (24%), Gaps = 49/147 (33%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKR------LDFPEMKFSLYFLGYEDTASAPADPVDR 70
               + D   S+ FY  +LG  L  R      L+   +   L     E     PA     
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSR---EPQYGGPAAD--- 61

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
                        TH                          GI   D  +   +    GV
Sbjct: 62  ------------YTHY-----------------------AFGIAAADFARFAAQLRAHGV 86

Query: 131 EFAKKPDGGKLKGVAFIKDPDDYWIEI 157
              K+          +  DPD + +E 
Sbjct: 87  REWKQNRSEG-DSF-YFLDPDGHRLEA 111

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 44.8 bits (106), Expect = 7e-07
 Identities = 18/154 (11%), Positives = 37/154 (24%), Gaps = 47/154 (30%)

Query: 15  HFTMFRI--KDPKVSLDFYSRVLGMSLLKRLD-FPEMKFSLYFLGYEDTASAPADPVDRT 71
           +     I   +          +L        D F +     + L        P +     
Sbjct: 5   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSG 64

Query: 72  VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 131
           +                                      I I V+DV +  +R   LG++
Sbjct: 65  II-------------------------------------IHIEVEDVDQNYKRLNELGIK 87

Query: 132 FAKKPD----GGKLKGVAFIKDPDDYWIEIFDLK 161
               P     G +      ++ P    ++ + +K
Sbjct: 88  VLHGPTVTDWGTE---SLLVQGPAGLVLDFYRMK 118

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 46.5 bits (110), Expect = 9e-07
 Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 28/146 (19%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
           H +M   K+   +  FY  VLG+  +K     +     Y L Y D   +P      T  +
Sbjct: 33  HISM-VTKNANENNHFYKNVLGLRRVKMTVNQDDPSM-YHLFYGDKTGSPG-----TELS 85

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVE 131
           F                  +                IG+ V     ++   ERFE+  V+
Sbjct: 86  FF-----------------EIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVK 128

Query: 132 FAKKPDGGKLKGVAFIKDPDDYWIEI 157
            ++         + F +D +   + +
Sbjct: 129 HSEMTTYANRPALQF-EDAEGLRLVL 153

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 44.4 bits (105), Expect = 1e-06
 Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 37/146 (25%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
               +KD   +  F   +     +      +  FSL    +   A               
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIYS--SGDKTFSLSKEKFFLIAG-------------- 51

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEF-- 132
               I +                  + + R + HI   +  ++V +  ER + LGVE   
Sbjct: 52  --LWICIMEGD--------------SLQERTYNHIAFQIQSEEVDEYTERIKALGVEMKP 95

Query: 133 AKKPDGGKLKGVAFIKDPDDYWIEIF 158
            +    G+ + + +  D D++  E+ 
Sbjct: 96  ERPRVQGEGRSI-YFYDFDNHLFELH 120

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 44.5 bits (105), Expect = 2e-06
 Identities = 24/160 (15%), Positives = 36/160 (22%), Gaps = 45/160 (28%)

Query: 11  KRFPHFTMFRI--KDPKVSLDFYSRVLGMSLLKRLD---FPEMKFSLYFLGYEDTASAPA 65
           K     +   I  +D      FY +V G   ++ +    F  +      +G         
Sbjct: 4   KNMADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIG--------- 54

Query: 66  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKAC 122
                    F      EL          +  G             +   VD    V K  
Sbjct: 55  ---------FNAHEAYEL---MQLAQFSETSG---------IKFLLNFDVDTKEAVDKLV 93

Query: 123 ERFERLGVEFAKKP----DGGKLKGVAFIKDPDDYWIEIF 158
                 G    K P            A + DP+     I 
Sbjct: 94  PVAIAAGATLIKAPYETYYHWY---QAVLLDPERNVFRIN 130

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 43.6 bits (103), Expect = 2e-06
 Identities = 20/147 (13%), Positives = 37/147 (25%), Gaps = 44/147 (29%)

Query: 16  FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 75
                  +P  +  FY  +LGM +     +                          + T 
Sbjct: 10  VANIATPEPARAQAFYGDILGMPVAMDHGW--------------------------IVTH 43

Query: 76  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK- 134
             P       ++  E                    + I VD+  +   R  + G+     
Sbjct: 44  ASPLEAHAQVSFAREGGSG-----------TDVPDLSIEVDNFDEVHARILKAGLPIEYG 92

Query: 135 ---KPDGGKLKGVAFIKDPDDYWIEIF 158
              +  G +     F++DP    I I 
Sbjct: 93  PVTEAWGVQ---RLFLRDPFGKLINIL 116

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 44.0 bits (103), Expect = 2e-06
 Identities = 20/153 (13%), Positives = 36/153 (23%), Gaps = 38/153 (24%)

Query: 19  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 78
              +D   + DFY   LG  L +R      + +L F G +                    
Sbjct: 15  IPARDLDEAYDFYVTKLGCKLARR---YPDRITLDFFGDQLVC----------------- 54

Query: 79  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 136
                 H              +       FG             +  ++ G+ F      
Sbjct: 55  ------HLSDRWDREVSMYPRH-------FGITFRDKKHFDNLYKLAKQRGIPFYHDLSR 101

Query: 137 ---DGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
                 +     F+ DP +  +E         +
Sbjct: 102 RFEGLIEEHETFFLIDPSNNLLEFKYYFDDRMM 134

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 43.6 bits (103), Expect = 3e-06
 Identities = 21/146 (14%), Positives = 36/146 (24%), Gaps = 35/146 (23%)

Query: 17  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 76
                 DP  ++D+  RV G  LL R            L                     
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTGG----------------- 47

Query: 77  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF---- 132
               + +       +     G             + + V DV +   R    G +     
Sbjct: 48  --GIVMVRRTGEPYTVSCAGG--------HTCKQVIVWVSDVDEHFMRSTAAGADIVQPL 97

Query: 133 AKKPDGGKLKGVAFIKDPDDYWIEIF 158
             KP G +      ++D + +  E  
Sbjct: 98  QDKPWGLR---QYLVRDLEGHLWEFT 120

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 44.7 bits (105), Expect = 3e-06
 Identities = 26/172 (15%), Positives = 42/172 (24%), Gaps = 40/172 (23%)

Query: 22  KDPKVSLDFYSRVLGMSLLKR-------------LDF---PEMKFSLYFLGY----EDTA 61
            +    L FY+ +LG   +               + F    +     Y +          
Sbjct: 35  AELDRMLAFYTNMLGAQHVHEQADAFTIQLGVSQIQFRAAADGTKPFYHIAINIAANHFQ 94

Query: 62  SAPADPVDRTVWTFGKPATIELTHNWGTES----DPD-----FKGYHN---------GNS 103
              A                     +   S    DP                        
Sbjct: 95  EGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAAPVLDKPFSAD 154

Query: 104 EPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWI 155
           +    G I IT  DV +A  R ++       K D  +  G+ FI D D + +
Sbjct: 155 QLLSIGEINITTSDVEQAATRLKQAE--LPVKLDQIEPAGLNFIGDQDLFLL 204

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 42.7 bits (100), Expect = 7e-06
 Identities = 23/145 (15%), Positives = 37/145 (25%), Gaps = 28/145 (19%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
                 I D + S  FY    G + + R      +   Y +     A+            
Sbjct: 7   AVITLGIGDLEASARFYGEGFGWAPVFRNP----EIIFYQMNGFVLATWLVQ-------- 54

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 134
                   L  + G                     H      +V    ER    G +  +
Sbjct: 55  -------NLQEDVGVAVTSRPGSMA--------LAHNVRAETEVAPLMERLVAAGGQLLR 99

Query: 135 KPDGGKLKGV-AFIKDPDDYWIEIF 158
             D     G+  ++ DPD +  EI 
Sbjct: 100 PADAPPHGGLRGYVADPDGHIWEIA 124

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 41.5 bits (97), Expect = 1e-05
 Identities = 22/151 (14%), Positives = 38/151 (25%), Gaps = 41/151 (27%)

Query: 14  PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 73
           P+  +  + + + S DFY  +     +                                 
Sbjct: 14  PNLQLVYVSNVERSTDFYRFIFKKEPVFVTP--------------------------RYV 47

Query: 74  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGIT------VDDVYKACERFER 127
            F            G E            +E   F  IGI       VD ++    + + 
Sbjct: 48  AFPSSGDALFAIWSGGEEPV---------AEIPRFSEIGIMLPTGEDVDKLFNEWTKQKS 98

Query: 128 LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF 158
             +   K+P          I DPD + I + 
Sbjct: 99  HQIIVIKEPYTDVFGRTFLISDPDGHIIRVC 129

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 42.0 bits (98), Expect = 3e-05
 Identities = 36/149 (24%), Positives = 51/149 (34%), Gaps = 34/149 (22%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLK---RLDFPEMKFSLYFLGYEDTASAPADPVDRT 71
           H T   +  P+ + DFY+ VLG+ L+K     D P      Y L + +            
Sbjct: 11  HITA-IVGHPQENTDFYAGVLGLRLVKQTVNFDDPGT----YHLYFGNEG---------- 55

Query: 72  VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD--VYKACERFERLG 129
               GKP TI     W         G   G       G     V    +    +R E+  
Sbjct: 56  ----GKPGTIITFFPW--------AGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFN 103

Query: 130 VEFAKKPDGGKLKGVAFIKDPDDYWIEIF 158
           V + K    G+ + V F  DP    +EI 
Sbjct: 104 VPYTKIERFGE-QYVEF-DDPHGLHLEIV 130

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 39.8 bits (93), Expect = 7e-05
 Identities = 29/153 (18%), Positives = 43/153 (28%), Gaps = 41/153 (26%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
                 ++D   SL+FY R LG+ +                        PA+        
Sbjct: 6   SLFAVVVEDMAKSLEFY-RKLGVEI------------------------PAEADSAPHTE 40

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV-----DDVYKACERFERLG 129
                 I L  +    +    + Y      P G     I         V K        G
Sbjct: 41  AVLDGGIRLAWD----TVETVRSYDPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAG 96

Query: 130 VEFAKKP----DGGKLKGVAFIKDPDDYWIEIF 158
            E   KP     G +    A +KDPD   +++F
Sbjct: 97  YEGHLKPWNAVWGQR---YAIVKDPDGNVVDLF 126

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 39.7 bits (92), Expect = 9e-05
 Identities = 19/145 (13%), Positives = 43/145 (29%), Gaps = 32/145 (22%)

Query: 18  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 77
           ++  KD   ++ ++  +LG             +S   +  +D               F  
Sbjct: 26  VYFTKDMDKTVKWFEEILG-------------WSGDIVARDDEGFG------DYGCVFDY 66

Query: 78  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 137
           P+ + + H         F+G+H    EP       + ++ +    +  +  G +      
Sbjct: 67  PSEVAVAHL------TPFRGFHLFKGEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIY 120

Query: 138 ----GGKLKGVAFIKDPDDYWIEIF 158
               G +      I   D   +  F
Sbjct: 121 TQPWGAR---ECSITTTDGCILRFF 142

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 39.1 bits (91), Expect = 1e-04
 Identities = 21/151 (13%), Positives = 43/151 (28%), Gaps = 40/151 (26%)

Query: 14  PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 73
                    D   +  FY    G ++    + P+M +S+   G    +  P +P      
Sbjct: 26  IVHFEIPFDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPG----- 77

Query: 74  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGH--IGITVDDVYKACERFERLGVE 131
                                    + G  +        + + V+ +  A ER E LG +
Sbjct: 78  -----------------------YINGGMMQRGEVTTPVVTVDVESIESALERIESLGGK 114

Query: 132 FAKKP----DGGKLKGVAFIKDPDDYWIEIF 158
                    + G     A+  D +   + ++
Sbjct: 115 TVTGRTPVGNMGF---AAYFTDSEGNVVGLW 142

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 37.2 bits (85), Expect = 8e-04
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 17/43 (39%)

Query: 40 LKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIE 82
          LK+L   +    LY    +D  SAPA  +          AT+E
Sbjct: 22 LKKL---QASLKLY---ADD--SAPALAIK---------ATME 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	170
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.95
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.92
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.92
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.9
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.9
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.9
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.89
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.89
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.88
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.87
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.87
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.86
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.86
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.86
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.86
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.86
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.85
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.85
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.85
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.84
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.84
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.83
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.83
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.83
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.82
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.82
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.82
3ghj_A	141	Putative integron gene cassette protein; integron	99.82
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.82
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.82
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.81
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.81
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.81
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.81
2i7r_A	118	Conserved domain protein; structural genomics cons	99.81
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.81
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.81
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.81
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.8
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.8
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.79
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.79
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.79
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.79
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.78
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.78
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.77
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.77
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.76
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.75
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.74
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.74
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.73
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.72
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.72
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.71
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.71
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.71
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.71
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.7
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.7
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.7
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.69
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.69
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.69
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.69
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.68
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.67
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.67
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.66
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.66
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.66
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.66
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.66
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.66
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.65
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.64
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.64
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.6
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.6
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.6
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.58
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.58
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.55
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.53
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.52
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.5
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.48
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.47
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.42
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.42
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.42
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.37
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.36
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.34
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.33
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.32
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.32
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.21
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.16
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.45
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.12
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	97.99
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	96.68
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	96.48
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	94.9
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	94.73
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	94.28
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	93.66
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	93.63
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	93.13
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	93.11
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	92.84
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	92.82
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	92.72
3ghj_A	141	Putative integron gene cassette protein; integron	92.25
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	91.67
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	91.45
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	90.39
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	89.97
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	89.47
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	89.33
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	89.18
2p25_A	126	Glyoxalase family protein; structural genomics, MC	88.92
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	87.71
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	87.69
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	87.48
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	87.27
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	87.16
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	87.09
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	87.02
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	86.55
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	86.04
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	85.79
3huh_A	152	Virulence protein STM3117; structural genomics, ny	85.47
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	84.99
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	84.44
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	84.33
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	84.23
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	83.63
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	83.49
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	83.25
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	83.13
2i7r_A	118	Conserved domain protein; structural genomics cons	80.77

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.95  E-value=4e-27  Score=168.60  Aligned_cols=164  Identities=58%  Similarity=1.079  Sum_probs=122.5

Q ss_pred             CCCCCCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEE
Q 030857            3 LPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIE   82 (170)
Q Consensus         3 ~~~~~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le   82 (170)
                      ..+++.+..++++|++|.|+|++++++||+++|||++..+...++..+.+++++.++....+.......+|...+...++
T Consensus        24 ~~~~~~~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  103 (187)
T 3vw9_A           24 SDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLE  103 (187)
T ss_dssp             CCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEE
T ss_pred             cCCCCccceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEE
Confidence            45667778899999999999999999999999999999887766667888888765432111122223344444457899


Q ss_pred             EEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           83 LTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        83 l~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      |+.......... .++..++..+.++.|++|.|+|+++++++|+++|+++...+..+.+++.+||+|||||.|||++...
T Consensus       104 l~~~~~~~~~~~-~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  182 (187)
T 3vw9_A          104 LTHNWGTEDDET-QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNK  182 (187)
T ss_dssp             EEEETTGGGCTT-CCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGGG
T ss_pred             EEEecCCCCCCc-cccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEccc
Confidence            876544322111 1133344445688999999999999999999999999988876666667899999999999999987


Q ss_pred             ccccC
Q 030857          163 IGKIG  167 (170)
Q Consensus       163 ~~~~~  167 (170)
                      .+.++
T Consensus       183 ~~~~~  187 (187)
T 3vw9_A          183 MATLM  187 (187)
T ss_dssp             SGGGC
T ss_pred             cccCC
Confidence            77654

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.92  E-value=6e-24  Score=151.82  Aligned_cols=162  Identities=63%  Similarity=1.128  Sum_probs=109.0

Q ss_pred             CCCCCCCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEE
Q 030857            2 KLPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI   81 (170)
Q Consensus         2 ~~~~~~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   81 (170)
                      .|++.+.+..++++|+.|.|+|++++++||+++|||++..+...++..+..++++.++....+........|...++..+
T Consensus        20 ~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l   99 (184)
T 2za0_A           20 CSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATL   99 (184)
T ss_dssp             CCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEE
T ss_pred             cCCcCCCccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceE
Confidence            35666777788999999999999999999999999999876543334455666664321000000000111212234688


Q ss_pred             EEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           82 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        82 el~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      +|+.....+..+.. ++..+.....++.|++|.|+|+++++++|+++|+++...+..+.+++.+||+|||||+|||++..
T Consensus       100 ~L~~~~~~~~~~~~-~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          100 ELTHNWGTEDDETQ-SYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             EEEEETTGGGCTTC-CCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             EEEecCCCCCCccc-ccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            88765332111110 12222222247789999999999999999999999998876555556789999999999999987


Q ss_pred             ccc
Q 030857          162 TIG  164 (170)
Q Consensus       162 ~~~  164 (170)
                      ..-
T Consensus       179 ~~~  181 (184)
T 2za0_A          179 KIA  181 (184)
T ss_dssp             TGG
T ss_pred             ccc
Confidence            643

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.92  E-value=1.1e-24  Score=151.75  Aligned_cols=129  Identities=17%  Similarity=0.245  Sum_probs=88.6

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .++++|++|.|+|+++|++||+++|||++..+....+..+  ..+......               ....+.+ .....+
T Consensus        24 ~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~~~--~~~~~~~~~---------------~~~~l~~-~~~~~~   85 (155)
T 4g6x_A           24 AMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRW--LTVVSPEAP---------------DGTQLLL-EPSSHA   85 (155)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTEEE--EEEECTTCT---------------TSCEEEE-EECCST
T ss_pred             ceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCceE--EEEeccCCC---------------cceEEEe-ccCCCc
Confidence            4689999999999999999999999999987765544332  222221110               0122222 211111


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ....   ... .....+..|++|.|+|+++++++|+++|+++..+|...++++.+||+|||||+|||+|..
T Consensus        86 ~~~~---~~~-~~~~~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A           86 AVTP---FKE-ALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             THHH---HHH-HHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC-
T ss_pred             cccc---ccc-ccccCCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEEC
Confidence            1000   000 001126679999999999999999999999998886666678899999999999999863

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.90  E-value=1.9e-22  Score=136.37  Aligned_cols=129  Identities=40%  Similarity=0.700  Sum_probs=93.4

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      ++++|+.|.|+|++++++||+++||+++......++..+..+++..++..               .+..+++........
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~~   65 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK   65 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCC---------------CCcEEEEEEcCCCCc
Confidence            47899999999999999999999999998876545445566666654310               135788875433211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc--eEEEEECCCCCEEEEEecCcccc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK--GVAFIKDPDDYWIEIFDLKTIGK  165 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~--~~~~~~DPdG~~iel~~~~~~~~  165 (170)
                            ...    ..+..|++|.|+|+++++++|+++|+++...|....++  +.+||+|||||.|||++......
T Consensus        66 ------~~~----~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~~~  131 (135)
T 1f9z_A           66 ------YEL----GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR  131 (135)
T ss_dssp             ------CCC----CSSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-----
T ss_pred             ------ccC----CCCccEEEEEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCCCC
Confidence                  111    12678999999999999999999999998766332222  46889999999999999876443

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.90  E-value=1.4e-22  Score=135.55  Aligned_cols=122  Identities=21%  Similarity=0.280  Sum_probs=92.4

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      +++++|++|.|+|++++++||+++|||++..+...++.++..+++..++                  +..++|.......
T Consensus         1 gm~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~------------------~~~l~l~~~~~~~   62 (127)
T 3e5d_A            1 GMKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED------------------GARLEIMSRTDVT   62 (127)
T ss_dssp             -CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS------------------SCEEEEEEETTCC
T ss_pred             CCEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC------------------CcEEEEEecCCCC
Confidence            3689999999999999999999999999987754444455666666432                  4678887654332


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEE
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  158 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  158 (170)
                      ..+    .    ....+..|++|.|+|   +++++++++++|+++...|.....+ +.+||+|||||.|||+
T Consensus        63 ~~~----~----~~~~g~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           63 GKT----T----GENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CCC----C----SSCSSCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CCC----C----cCCCceEEEEEEcCCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence            211    1    122367899999999   8899999999999998766443333 5789999999999996

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.90  E-value=5.7e-22  Score=133.29  Aligned_cols=126  Identities=23%  Similarity=0.309  Sum_probs=91.7

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|++|.|+|++++++||+++|||++..+...++.....+++..+                   +..++|+.....++
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~   64 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG-------------------DIELEIFGNKLTDS   64 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET-------------------TEEEEEEECCTTST
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC-------------------CeEEEEEecccccc
Confidence            48999999999999999999999999999876555444444555543                   35788877321110


Q ss_pred             ---CCCC-CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCcc-ceEEEEECCCCCEEEEEe
Q 030857           92 ---DPDF-KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        92 ---~~~~-~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~  159 (170)
                         .... ....   ....+..|++|.|+|+++++++|+++|+++...+..... .+.+||+|||||.|||+|
T Consensus        65 ~~~~~~~~~~~~---~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           65 NYCAPPERISWP---REACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             TCCCCCCCCCSS---SCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             cccCCccccCCC---CCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence               0000 0011   023477899999999999999999999998766544333 367899999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.89  E-value=2.2e-22  Score=135.97  Aligned_cols=127  Identities=20%  Similarity=0.176  Sum_probs=92.0

Q ss_pred             CCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEee-ecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857            9 CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRL-DFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus         9 ~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      .+.++++|++|.|+|+++|++||+ +|||++..+. ..+..+...+++..+                   +..++|+...
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~   62 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING-------------------GYRVELVAPD   62 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET-------------------TEEEEEEEES
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC-------------------CEEEEEEecC
Confidence            345699999999999999999999 9999997652 223344555665542                   4678888754


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecC--CCCcc-ceEEEEECCCCCEEEEEec
Q 030857           88 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP--DGGKL-KGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~--~~~~~-~~~~~~~DPdG~~iel~~~  160 (170)
                      ....  ....+..  . ..+++|++|.|+|+++++++|+++|+++...|  ..+.. .+.+|++|||||+|||+|+
T Consensus        63 ~~~~--~~~~~~~--~-~~g~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           63 GEDS--PINKTIK--K-GSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             STTC--THHHHTT--T-SCEEEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             CCCC--hHHHHHh--c-CCceEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            3321  1000100  0 23778999999999999999999999988654  22222 3578999999999999984

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.89  E-value=6.6e-22  Score=136.66  Aligned_cols=133  Identities=18%  Similarity=0.153  Sum_probs=92.8

Q ss_pred             CCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC------cceEEEeeeccCCCCCCCCcccceeeecCCCcE
Q 030857            7 TSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT   80 (170)
Q Consensus         7 ~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (170)
                      +..+..+++|++|.|+|++++++||+++|||++......++      ..-...++..++                  +..
T Consensus        13 ~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~   74 (156)
T 3kol_A           13 APGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPD------------------GTI   74 (156)
T ss_dssp             CTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTT------------------SCE
T ss_pred             CccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCC------------------CCE
Confidence            33455689999999999999999999999999987322111      000123333322                  467


Q ss_pred             EEEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEE
Q 030857           81 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  158 (170)
Q Consensus        81 lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  158 (170)
                      ++|+......+.. .  .  ......+..|++|.|+  |+++++++|+++|+++...|....+++.+||+|||||.|||+
T Consensus        75 l~l~~~~~~~~~~-~--~--~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~  149 (156)
T 3kol_A           75 LDLFGEPELSPPD-P--N--PEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIR  149 (156)
T ss_dssp             EEEEECTTCCCSS-S--S--TTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEE
T ss_pred             EEEEecCCCCcCC-C--C--CCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEE
Confidence            8887654332110 0  0  0112247789999999  999999999999999987664444456899999999999999


Q ss_pred             ecCc
Q 030857          159 DLKT  162 (170)
Q Consensus       159 ~~~~  162 (170)
                      +...
T Consensus       150 ~~~~  153 (156)
T 3kol_A          150 CDPE  153 (156)
T ss_dssp             ECCC
T ss_pred             ecCC
Confidence            8753

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.88  E-value=2.6e-21  Score=130.23  Aligned_cols=122  Identities=19%  Similarity=0.290  Sum_probs=90.1

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++|+.|.|+|++++++||+++|||++..+....+ ......+..++                 +...+.+.......
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~-----------------~~~~l~l~~~~~~~   72 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPG-----------------AQTQVALGLPSWYE   72 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTT-----------------CSCEEEEECGGGCS
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCC-----------------CceEEEEecCcccc
Confidence            4589999999999999999999999999998754322 22333333221                 14567776532110


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                      .          ...+.+..|++|.|+|+++++++|+++|+++..+|...+++ +.+||+|||||.|||+|.
T Consensus        73 ~----------~~~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           73 D----------GRKPGGYTGISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             S----------CCCSCEEEEEEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEEC
T ss_pred             c----------ccCCCCeEEEEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEeC
Confidence            0          01123668999999999999999999999998777554444 689999999999999873

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.88  E-value=2.5e-21  Score=129.10  Aligned_cols=122  Identities=19%  Similarity=0.275  Sum_probs=86.8

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|++|.|+|++++++||+++||+++..+...++.....+++..+                   ...++|+.......
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~   64 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-------------------SQELEIFISDQFPA   64 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEET-------------------TEEEEEEECTTCCC
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecC-------------------CeEEEEEeccCCCC
Confidence            47999999999999999999999999998754322222222333332                   23778876433221


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEe
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  159 (170)
                      .+.   .    ....+..|++|.|+|+++++++|+++|+++...+.....+ +.+||+|||||.|||+|
T Consensus        65 ~~~---~----~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           65 RPS---Y----PEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             CCC---S----SCCSSCCCEEEECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             CCC---C----CCCccceEEEEEeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            110   0    1123678999999999999999999999987655433333 57899999999999986

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.87  E-value=1.5e-21  Score=136.01  Aligned_cols=130  Identities=20%  Similarity=0.261  Sum_probs=92.4

Q ss_pred             CCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC--------------cceEEEeeeccCCCCCCCCccccee
Q 030857            7 TSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------------MKFSLYFLGYEDTASAPADPVDRTV   72 (170)
Q Consensus         7 ~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~   72 (170)
                      +++...+++|++|.|+|++++++||+++|||++..+...+.              ....++++..               
T Consensus        13 ~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------------   77 (159)
T 3gm5_A           13 NILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL---------------   77 (159)
T ss_dssp             SCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE---------------
T ss_pred             cccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec---------------
Confidence            44456789999999999999999999999999876543221              2334444443               


Q ss_pred             eecCCCcEEEEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCC-
Q 030857           73 WTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPD-  151 (170)
Q Consensus        73 ~~~~~~~~lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPd-  151 (170)
                          +...++|+.......  ....+...  ...|++|+||.|+|+++++++|+++|+++...+.. ...+.+|++||| 
T Consensus        78 ----g~~~leL~~~~~~~~--~~~~~l~~--~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~-~g~~~~~~~dpd~  148 (159)
T 3gm5_A           78 ----GPLQLELIEPDENPS--TWREFLDK--NGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF-EGGRYAYIDTLRA  148 (159)
T ss_dssp             ----TTEEEEEEEECSSSC--HHHHHHHH--HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-TTEEEEEESCHHH
T ss_pred             ----CCEEEEEEEECCCCC--hhHHHhhc--CCceEEEEEEEcCCHHHHHHHHHHCCCcEeecccc-CCeeEEEEecccc
Confidence                256899987533211  00000000  01378999999999999999999999999765422 124688999999 


Q ss_pred             -CCEEEEEec
Q 030857          152 -DYWIEIFDL  160 (170)
Q Consensus       152 -G~~iel~~~  160 (170)
                       |++|||+|+
T Consensus       149 ~G~~iEl~e~  158 (159)
T 3gm5_A          149 LKVMIELLEN  158 (159)
T ss_dssp             HSSEEEEEEE
T ss_pred             CcEEEEEEec
Confidence             999999986

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.87  E-value=4.3e-21  Score=128.93  Aligned_cols=127  Identities=22%  Similarity=0.352  Sum_probs=90.9

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++|++|.|+|++++++||+++|||++..+...++.+...+++..+                   +..++++......
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~   63 (134)
T 3rmu_A            3 LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG-------------------NTKMELLHPLGLD   63 (134)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS-------------------SSEEEEEEECSTT
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC-------------------CEEEEEEecCCCC
Confidence            468999999999999999999999999998765544444556666643                   3578887654332


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecC-CCCccc-eEEEE--ECCCCCEEEEEe
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DGGKLK-GVAFI--KDPDDYWIEIFD  159 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~-~~~~~~-~~~~~--~DPdG~~iel~~  159 (170)
                      ...  ..+.. .....++.|++|.|+|+++++++|+++|+++...+ ..+..+ +..|+  +|||||.|||+|
T Consensus        64 ~~~--~~~~~-~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           64 SPI--AGFLQ-KNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             CTT--HHHHH-HCTTCEEEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             chh--hhhhh-ccCCCCceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            110  00000 01123779999999999999999999999987654 222323 35566  899999999987

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.86  E-value=2.7e-20  Score=127.63  Aligned_cols=122  Identities=37%  Similarity=0.640  Sum_probs=90.5

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++..+...++..+..+++..++..               +...++|........
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~l~l~~~~~~~~   71 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEM---------------SSTVLELTYNYGVTS   71 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCC---------------CceEEEEEecCCCCC
Confidence            48999999999999999999999999998865444444555666654310               135788876543211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                            ..    ...+..|++|.|+|+++++++|+++|+++...  .+ ....+||+|||||.|||++..
T Consensus        72 ------~~----~~~~~~h~~f~v~d~~~~~~~l~~~G~~~~~~--~g-~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           72 ------YK----HDEAYGHIAIGVEDVKELVADMRKHDVPIDYE--DE-SGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             ------CC----CCSSEEEEEEEESCHHHHHHHHHHTTCCEEEE--CS-SSSEEEEECTTSCEEEEEEHH
T ss_pred             ------CC----CCCCceEEEEEeCCHHHHHHHHHHCCCEEecc--CC-cEEEEEEECCCCCEEEEEEcC
Confidence                  11    12367899999999999999999999998876  22 122349999999999999864

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.86  E-value=6.3e-21  Score=133.47  Aligned_cols=128  Identities=23%  Similarity=0.319  Sum_probs=93.6

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|++|.|+|++++++||+++|||++..+...++.+...+++..+                   +..++|+.......
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-------------------~~~l~l~~~~~~~~   67 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG-------------------ESKIELLEPLSEES   67 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET-------------------TEEEEEEEESSTTS
T ss_pred             CcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC-------------------CeEEEEEeECCCCC
Confidence            58999999999999999999999999998875544445566666543                   45788876543321


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeec-CCCCccc-eEEEE--ECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLK-GVAFI--KDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~-~~~~~~~-~~~~~--~DPdG~~iel~~~~~  162 (170)
                      .  ...+..  ....|+.|++|.|+|+++++++|+++|+++... +..+..+ +.+|+  +|||||+|||++...
T Consensus        68 ~--~~~~~~--~~~~g~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           68 P--IAKFIQ--KRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             H--HHHHHH--HHCSEEEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             h--HHHHhh--cCCCCeEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCC
Confidence            0  000000  001378899999999999999999999998766 5444433 45666  499999999999764

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.86  E-value=1.5e-20  Score=129.56  Aligned_cols=131  Identities=14%  Similarity=0.184  Sum_probs=91.2

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeec-----------CCcceEEEeeeccCCCCCCCCcccceeeecCCCc
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDF-----------PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA   79 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (170)
                      ..+++|++|.|+|++++++||++ |||++......           ++.....+++..++                 +..
T Consensus         9 ~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----------------g~~   70 (153)
T 1ss4_A            9 LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD-----------------GHS   70 (153)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT-----------------SSC
T ss_pred             ccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCC-----------------CCc
Confidence            35899999999999999999999 99999865432           11234455555432                 135


Q ss_pred             EEEEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCcc-ceEEEEECCCCCEEEEE
Q 030857           80 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIF  158 (170)
Q Consensus        80 ~lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~  158 (170)
                      .++|+....+....... .  ......++.|++|.|+|+++++++|+++|+++..++....+ .+.+||+|||||.|||+
T Consensus        71 ~l~l~~~~~~~~~~~~~-~--~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  147 (153)
T 1ss4_A           71 RIELSRFLTPPTIADHR-T--APVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLA  147 (153)
T ss_dssp             EEEEEEEEESCCCCBCT-T--CCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEE
T ss_pred             EEEEEEecCCCCccccc-C--CCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEE
Confidence            78887642222110000 0  01122367899999999999999999999999876633223 35789999999999999


Q ss_pred             ecCc
Q 030857          159 DLKT  162 (170)
Q Consensus       159 ~~~~  162 (170)
                      +...
T Consensus       148 ~~~~  151 (153)
T 1ss4_A          148 EELG  151 (153)
T ss_dssp             EECC
T ss_pred             eccC
Confidence            8643

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.86  E-value=1.5e-20  Score=127.67  Aligned_cols=122  Identities=18%  Similarity=0.224  Sum_probs=90.0

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++..+....+..+..+++. +                   +..++|........
T Consensus         4 ~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~-------------------~~~l~l~~~~~~~~   63 (136)
T 2rk0_A            4 SGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G-------------------GLSIVLREHDGGGT   63 (136)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T-------------------SCEEEEEEETTCSS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C-------------------CCEEEEEeCCCCcc
Confidence            479999999999999999999999999987755333334444444 1                   45788876533211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                       +.   +   .....+..|++|.|   +|+++++++|+++|+++.. +....+++.+||+|||||.|||.+..
T Consensus        64 -~~---~---~~~~~g~~h~~f~v~~~~d~~~~~~~l~~~G~~~~~-~~~~~~g~~~~~~DPdG~~iel~~~~  128 (136)
T 2rk0_A           64 -DL---F---DETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTP-TQELPFGWILAFRDADNIALEAMLGR  128 (136)
T ss_dssp             -SC---C---CTTSSEEEEEEEEESSHHHHHHHHHHHHHHTCCBCC-CEEETTEEEEEEECTTCCEEEEEEEC
T ss_pred             -cC---C---CCCCCCcceEEEEeCCHHHHHHHHHHHHHCCCcccC-ccccCCceEEEEECCCCCEEEEEEcC
Confidence             10   1   01123678999999   8999999999999999764 32233457889999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.86  E-value=1.3e-20  Score=127.50  Aligned_cols=115  Identities=18%  Similarity=0.235  Sum_probs=85.8

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++|+.|.|+|++++++||+++|||++.....    .+.  .+..+                  ++..+.+.....+.
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~------------------~~~~l~l~~~~~~~   66 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYV--AFPSS------------------GDALFAIWSGGEEP   66 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEE--EEECS------------------TTCEEEEESSSCCC
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEE--EEEcC------------------CCcEEEEEeCCCCC
Confidence            4699999999999999999999999999876532    222  22211                  13567775432110


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHh---cCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFER---LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~---~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                        .         ....+..|++|.|+|   ++++++++++   +|+++..+|....+++.+||+|||||.|||.+.
T Consensus        67 --~---------~~~~~~~~~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           67 --V---------AEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             --C---------TTSCCCEEEEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             --c---------CCCCCcceEEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeC
Confidence              0         111256899999986   9999999999   999998777554556789999999999999875

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.85  E-value=1.5e-20  Score=128.84  Aligned_cols=138  Identities=16%  Similarity=0.240  Sum_probs=93.1

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      +..+++|+.|.|+|++++++||+++|||++......++.+...+++..++...             ..+..++|+.....
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~-------------~~~~~l~l~~~~~~   72 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLT-------------EHMTQVQVMAPLND   72 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCC-------------TTCCEEEEEEESST
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCc-------------CcceEEEEeecCCC
Confidence            34689999999999999999999999999987654444444556666543100             00257888765332


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEe-ecCCCCccc-eEEEE--ECCCCCEEEEEecCc
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-KKPDGGKLK-GVAFI--KDPDDYWIEIFDLKT  162 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~-~~~~~~~~~-~~~~~--~DPdG~~iel~~~~~  162 (170)
                      ...  ...+........++.|++|.|+|+++++++|+++|+++. ..|....++ +.+|+  +|||||.|||++...
T Consensus        73 ~~~--~~~~~~~~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~~  147 (148)
T 1jc4_A           73 EST--VAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYPK  147 (148)
T ss_dssp             TSH--HHHHHHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECCC
T ss_pred             CCh--HHHHHHhCCCCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecCC
Confidence            110  000000000013678999999999999999999999988 345433334 45566  899999999998743

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.85  E-value=3.3e-20  Score=124.27  Aligned_cols=116  Identities=13%  Similarity=0.109  Sum_probs=84.8

Q ss_pred             ceeeeEEEEEe--CChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           11 KRFPHFTMFRI--KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        11 ~~~l~hv~i~v--~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ..+++|+.|.|  +|++++++||+++|||++..+....... ...++..+                   +..++|.....
T Consensus         8 ~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~-------------------~~~l~l~~~~~   67 (126)
T 2qqz_A            8 IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKR-GGCWFKCG-------------------NQEIHIGVEQN   67 (126)
T ss_dssp             EEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGG-CCEEEEET-------------------TEEEEEEECTT
T ss_pred             cceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCC-CceEEEeC-------------------CEEEEEEecCC
Confidence            34799999999  8999999999999999998653211000 11233322                   34677754311


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .              .+.+..|++|.|+|+++++++|+++|+++...+.. ...+.+||+|||||.|||+++.
T Consensus        68 ~--------------~~~~~~~~~f~v~d~~~~~~~l~~~G~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           68 F--------------NPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDHAR-PDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             C--------------CCCSSSCEEEEETTHHHHHHHHHHTTCCCEEECSS-TTEEEEEEECTTSCEEEEEEEC
T ss_pred             C--------------CCCCceEEEEEcCCHHHHHHHHHHcCCCccCCCCC-CCeeEEEEECCCCCEEEEEeCC
Confidence            1              01256899999999999999999999999877732 2346789999999999999863

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.85  E-value=9.7e-20  Score=122.48  Aligned_cols=119  Identities=18%  Similarity=0.232  Sum_probs=86.0

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++....   + .+  +++..+                   +..+++........
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~~--~~~~~~-------------------~~~~~l~~~~~~~~   63 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A-GR--IALEFG-------------------HQKINLHQLGNEFE   63 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEET-------------------TEEEEEEETTSCCS
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEec---C-Ce--EEEEcC-------------------CEEEEEEcCCCCcc
Confidence            38999999999999999999999999998762   2 22  223322                   35677765432211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC-HHHHHHHHHhcCCeEeecCCCCc----cceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDD-VYKACERFERLGVEFAKKPDGGK----LKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~d-i~~~~~~l~~~G~~~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      .     .  ......+..|++|.|+| +++++++|+++|+++...|....    ..+.+||+|||||.|||++...
T Consensus        64 ~-----~--~~~~~~~~~~~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           64 P-----K--AQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             S-----C--CTTCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             c-----c--CCCCCCCccEEEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            0     0  01122367899999997 99999999999999887653211    1257899999999999999753

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.84  E-value=5.6e-20  Score=125.35  Aligned_cols=122  Identities=14%  Similarity=0.144  Sum_probs=87.1

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      +.....|++|.|+|++++++||+++|||++..+... +..+..++++.++.                 ...+++....+.
T Consensus         8 m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~-----------------~~~l~l~~~~~~   69 (139)
T 1twu_A            8 FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA-----------------DYHLEFTQYEGG   69 (139)
T ss_dssp             CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS-----------------SEEEEEEEETTC
T ss_pred             CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC-----------------ceEEEEeecCCC
Confidence            455678899999999999999999999999876432 22345666664331                 345777654332


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCH---HHHHHHHHhcCCeEeec--CCCCccceEEEEECCCCCEEEEEecC
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVDDV---YKACERFERLGVEFAKK--PDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~di---~~~~~~l~~~G~~~~~~--~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ..      ...    ..+..|++|.|+|+   ++++++|+++|+++...  +.....+  .||+|||||.|||++..
T Consensus        70 ~~------~~~----~~~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           70 ST------APV----PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CC------CCC----CCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             CC------CCC----CCCccEEEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence            11      111    12668999999999   99999999999998732  2211222  37999999999999874

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.84  E-value=9e-20  Score=123.07  Aligned_cols=118  Identities=14%  Similarity=0.101  Sum_probs=80.5

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ...++|+.|.|+|+++|++||++ |||++..... ....+  .++...                  ++..+.|...... 
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~~--~~~~~~------------------~~~~l~l~~~~~~-   60 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGSE--VHRAVH------------------NGVEFSLYSIQNP-   60 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CC--EEEEEE------------------TTEEEEEEECCCC-
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCCE--EEEEeC------------------CCeEEEEEECCCC-
Confidence            35899999999999999999999 9999876521 11122  222200                  1345666332111 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCe-EeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE-FAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~-~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                             .    ....+..|++|.|+|+++++++++++|++ +..+|...+++..++|+|||||+|||.+..+
T Consensus        61 -------~----~~~~~~~~l~f~v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           61 -------Q----RSQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             -------S----SCCCCSEEEEEEESCHHHHHHHHTTSTTCEEEEEEEECC-CEEEEEECTTCCEEEEEC---
T ss_pred             -------c----CCCCCceEEEEEeCCHHHHHHHHHHCCCceeccCceeCCCccEEEEECCCCCEEEEEEecc
Confidence                   0    01124468999999999999999999999 7766654445545899999999999998764

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.83  E-value=2.6e-19  Score=123.71  Aligned_cols=121  Identities=17%  Similarity=0.218  Sum_probs=85.0

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++..+.   + +  ..++..+                   +..++|........
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~--~~~l~~~-------------------~~~l~l~~~~~~~~   76 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-N--RKALIFG-------------------AQKINLHQQEMEFE   76 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-T--EEEEEET-------------------TEEEEEEETTBCCS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-C--eEEEEeC-------------------CeEEEEeccCCcCC
Confidence            57999999999999999999999999998872   2 2  2233322                   35677765422211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC-CHHHHHHHHHhcCCeEeecCCC--Cc--cceEEEEECCCCCEEEEEecCccc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDG--GK--LKGVAFIKDPDDYWIEIFDLKTIG  164 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~-di~~~~~~l~~~G~~~~~~~~~--~~--~~~~~~~~DPdG~~iel~~~~~~~  164 (170)
                      ..       ......+..|++|.+. |+++++++|+++|+++...|..  +.  .++.+||+|||||+|||.+..+-+
T Consensus        77 ~~-------~~~~~~g~~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~  147 (152)
T 3huh_A           77 PK-------ASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEGH  147 (152)
T ss_dssp             SC-------CSSCCTTCCEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC----
T ss_pred             Cc-------CcCCCCCccEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccCc
Confidence            00       0112236789999997 9999999999999998776532  11  136789999999999999876543

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.83  E-value=3.4e-20  Score=127.76  Aligned_cols=114  Identities=19%  Similarity=0.242  Sum_probs=83.5

Q ss_pred             eEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 030857           15 HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   94 (170)
Q Consensus        15 ~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   94 (170)
                      .++.|.|+|++++++||+++|||++..+...++..+.+..++                     .  ++++......    
T Consensus         8 i~i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~---------------------~--~~l~~~~~~~----   60 (144)
T 3r6a_A            8 ILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS---------------------T--ILLIAGSEEA----   60 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET---------------------T--EEEEESCHHH----
T ss_pred             EEEEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec---------------------c--EEEecCCccc----
Confidence            349999999999999999999999887754333333333322                     1  4454321110    


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCcc
Q 030857           95 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  163 (170)
Q Consensus        95 ~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  163 (170)
                         .     .+.+..|++|.|+|+++++++|+++|+++..+|...++++.+||+|||||.|||++..+.
T Consensus        61 ---~-----~~~~~~hl~f~V~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           61 ---L-----KPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             ---H-----GGGGGCCEEEEESCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEECC-
T ss_pred             ---C-----CCCcceEEEEEeCCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcCCc
Confidence               0     011447999999999999999999999998776544456778999999999999998653

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.82  E-value=4e-19  Score=118.93  Aligned_cols=112  Identities=10%  Similarity=0.058  Sum_probs=83.9

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      +++..|+.|.|+|++++++||+++|||++..+   . ..+  .++..+                   +..+.|.......
T Consensus         3 ~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~---~-~~~--~~~~~~-------------------~~~l~l~~~~~~~   57 (124)
T 1xrk_A            3 KLTSAVPVLTARDVAEAVEFWTDRLGFSRVFV---E-DDF--AGVVRD-------------------DVTLFISAVQDQV   57 (124)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEE---C-SSE--EEEEET-------------------TEEEEEEECSCTT
T ss_pred             cccceeEEEEcCCHHHHHHHHHHccCceEEec---C-CCE--EEEEEC-------------------CEEEEEEcCCCCC
Confidence            35678999999999999999999999999875   1 122  223321                   3566665432110


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhc------CC--eEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL------GV--EFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~------G~--~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                                    ..+..|++|.|+|+++++++++++      |+  ++..+|...++++.+||+|||||.|||.+..
T Consensus        58 --------------~~~~~~~~~~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           58 --------------VPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             --------------TGGGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEEC-
T ss_pred             --------------CCCceEEEEEECCHHHHHHHHHHhcccccCCccccccCCceecCCCCEEEEECCCCCEEEEEEec
Confidence                          013369999999999999999999      99  8877765444457899999999999999864

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.82  E-value=7.1e-20  Score=126.61  Aligned_cols=123  Identities=13%  Similarity=0.118  Sum_probs=82.8

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      +..+++|+.|.|+|++++++||+++|||++...   ++..+  +++..++..      ..+..+ ........+...  +
T Consensus        22 M~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~--~~~~~~~~~------~~l~~~-~~~~~~~~l~~~--~   87 (148)
T 2r6u_A           22 MTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMDY--SMVTTGPVG------ESGMPD-EPGYINGGMMQR--G   87 (148)
T ss_dssp             TCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTTE--EEEECSCBC------TTSSBC-SSSCBCEEEEES--S
T ss_pred             cCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCCE--EEEEeCCcc------eeeccc-CCcccccceeec--C
Confidence            345899999999999999999999999999873   22232  333332210      000000 000111233211  0


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCc-cceEEEEECCCCCEEEEEecC
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                                    ...+. |++|.|+|+++++++|+++|+++..+|...+ +++.+||+|||||.|||++..
T Consensus        88 --------------~~~g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           88 --------------EVTTP-VVTVDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             --------------SSCSC-EEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             --------------CCCeE-EEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecC
Confidence                          00244 9999999999999999999999987664333 457899999999999999875

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.82  E-value=4.9e-19  Score=119.40  Aligned_cols=120  Identities=17%  Similarity=0.176  Sum_probs=85.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceE---EEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS---LYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      .+++|+.|.|+|++++++||+++|||++.....  +..+.   ..++..                   ++..+++.....
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~-------------------~~~~l~l~~~~~   61 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLI-------------------AGLWICIMEGDS   61 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEE-------------------TTEEEEEEECSS
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEe-------------------CCEEEEEecCCC
Confidence            489999999999999999999999999876432  11110   002221                   135677754211


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCCCC-ccceEEEEECCCCCEEEEEecCcccc
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLKTIGK  165 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~~~~~  165 (170)
                      .              ...+..|++|.|+  |+++++++++++|+++...+... ..++.+||+|||||.|||++......
T Consensus        62 ~--------------~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  127 (133)
T 2p7o_A           62 L--------------QERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLEER  127 (133)
T ss_dssp             C--------------CCCCSCEEEEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSSCCCC
T ss_pred             C--------------CCCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCChHHH
Confidence            1              0126689999994  99999999999999998776432 33467999999999999999765444


Q ss_pred             c
Q 030857          166 I  166 (170)
Q Consensus       166 ~  166 (170)
                      +
T Consensus       128 l  128 (133)
T 2p7o_A          128 L  128 (133)
T ss_dssp             G
T ss_pred             H
Confidence            3

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.82  E-value=3.7e-19  Score=121.87  Aligned_cols=111  Identities=15%  Similarity=0.179  Sum_probs=82.8

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++..+..  +..+  .++..++                 ++..+++......  
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~--~~~~~~~-----------------~~~~l~l~~~~~~--   83 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRW--NFLWVSG-----------------RAGMVVLQEEKEN--   83 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTE--EEEEETT-----------------TTEEEEEEECCSS--
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcE--EEEEecC-----------------CCcEEEEeccCCC--
Confidence            479999999999999999999999999988742  2222  3333222                 1457777653111  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCCCCc-cceEEEEECCCCCEEEEEe
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~  159 (170)
                                    .+..|++|.|+  |+++++++|+++|+++...+.... .++.+||+|||||.|||++
T Consensus        84 --------------~~~~h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           84 --------------WQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             --------------CCCCEEEEEECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             --------------CCCceEEEEEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence                          14579999997  999999999999999884332222 2467999999999999985

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.82  E-value=1.2e-19  Score=126.84  Aligned_cols=125  Identities=18%  Similarity=0.170  Sum_probs=86.4

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|++|.|+|++++++||+++|||++.....  .   ..+++..+                   ...+.++.......
T Consensus         7 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~---~~~~~~~g-------------------~~~~~l~~~~~~~~   62 (160)
T 3r4q_A            7 SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP--G---QLVFFKCG-------------------RQMLLLFDPQESSR   62 (160)
T ss_dssp             SCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET--T---TEEEEEET-------------------TEEEEEECHHHHTC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC--C---cEEEEeCC-------------------CEEEEEEecCCccC
Confidence            489999999999999999999999999988643  1   12333322                   34566654221100


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      ....  .........++.|++|.|   +|+++++++|+++|+++...+.....++.+||+|||||.|||++...
T Consensus        63 ~~~~--~~~~~~~~~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  134 (160)
T 3r4q_A           63 ADAN--NPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGKL  134 (160)
T ss_dssp             CCTT--CCSCCCEEEEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGGG
T ss_pred             cccc--CCCCcCCCcceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence            0000  000011123568999999   89999999999999998765533334568999999999999999753

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.82  E-value=2.1e-19  Score=124.22  Aligned_cols=118  Identities=18%  Similarity=0.259  Sum_probs=84.4

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++.....    .  .+++..++                  +..+.+........
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~--~~~~~~~~------------------g~~l~l~~~~~~~~   60 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----T--FAMFVMKT------------------GLRLGLWAQEEIEP   60 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----S--EEEEECTT------------------SCEEEEEEGGGCSS
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----C--EEEEEcCC------------------CcEEEEecCCcCCc
Confidence            489999999999999999999999999887631    2  22333211                  45677754422211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      ..         ....+..|++|.|+|   +++++++|+++|+++..+|....+++.+||+|||||.|||.+...
T Consensus        61 ~~---------~~~~~~~~l~f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           61 KA---------HQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             CC---------C----CEEEEEECSCHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC-
T ss_pred             cc---------cCCCCeEEEEEEcCCHHHHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcCh
Confidence            00         111245799999987   999999999999999877654444577999999999999998764

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.81  E-value=2.3e-19  Score=123.40  Aligned_cols=117  Identities=21%  Similarity=0.383  Sum_probs=85.8

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++..+.  +  .+  .++..++                  +..++|.......+
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~--~~--~~~~~~~------------------~~~l~l~~~~~~~~   79 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESS--P--TF--SLFVLAN------------------GMKLGLWSRHTVEP   79 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T--TE--EEEECTT------------------SCEEEEEETTSCSS
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCC--C--Ce--EEEEcCC------------------CcEEEEEeCCCCCC
Confidence            48999999999999999999999999998753  2  22  2333221                  34677754322111


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                            .   .....+..|++|.|+   |+++++++|+++|+++...|...++++.+||+|||||.|||+++.
T Consensus        80 ------~---~~~~~~~~hl~f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           80 ------K---ASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             ------C---CCCSSSSCEEEEECSSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEEC
T ss_pred             ------c---cCCCCCceEEEEEeCCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecC
Confidence                  1   011236689999997   589999999999999887765444557889999999999999863

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.81  E-value=1.6e-18  Score=117.46  Aligned_cols=112  Identities=18%  Similarity=0.203  Sum_probs=85.0

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++||+++.....  .    ..++..+                   +..+++....... 
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~-------------------~~~l~l~~~~~~~-   56 (135)
T 1nki_A            3 TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELG-------------------SLWLCLSREPQYG-   56 (135)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEET-------------------TEEEEEEECTTCC-
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecC-------------------CEEEEEEeCCCCC-
Confidence            589999999999999999999999999987631  1    1233322                   3456665432100 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                                 ....+..|++|.|+  |+++++++++++|+++...+..  .++.+||+|||||.|||++...
T Consensus        57 -----------~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           57 -----------GPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS--EGDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             -----------CCCSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCS--SSCEEEEECTTCCEEEEESCCH
T ss_pred             -----------CCCCCcceEEEEccHHHHHHHHHHHHHCCCceecCCCC--CeEEEEEECCCCCEEEEEECCc
Confidence                       11236689999998  9999999999999999877643  3567999999999999998754

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.81  E-value=1.2e-18  Score=118.33  Aligned_cols=120  Identities=14%  Similarity=0.094  Sum_probs=85.0

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   93 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   93 (170)
                      ...+.|.|+|++++++||+++|||++..+...+ +....+.+..+                   +..+.+........  
T Consensus         3 ~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~-------------------~~~l~l~~~~~~~~--   60 (137)
T 3itw_A            3 HMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG-------------------GGIVMVRRTGEPYT--   60 (137)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS-------------------SSEEEEEETTCCSS--
T ss_pred             eEEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC-------------------CeEEEEEecCCCcC--
Confidence            357899999999999999999999999775433 22333444322                   34666654321110  


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEecC
Q 030857           94 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        94 ~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  161 (170)
                          ..  .....++.|++|.|+|+++++++|+++|+++..++...+++ +.+||+|||||.|||.+..
T Consensus        61 ----~~--~~~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           61 ----VS--CAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             ----CE--ECCCCCCCEEEEEESCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC
T ss_pred             ----cc--CCCCCcEEEEEEEeCCHHHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEc
Confidence                00  00111223999999999999999999999998777544443 6789999999999999864

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.81  E-value=9.9e-19  Score=119.09  Aligned_cols=115  Identities=17%  Similarity=0.200  Sum_probs=83.1

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEE---EeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSL---YFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      .+++|+.|.|+|++++++||+++|||++..+...  ..+..   .++..                   ++..+++.....
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~-------------------g~~~l~l~~~~~   61 (139)
T 1r9c_A            3 EGLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLI-------------------GDIWVAIMQGEK   61 (139)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEE-------------------TTEEEEEEECCC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEE-------------------CCEEEEEEeCCC
Confidence            4899999999999999999999999999875321  11100   02221                   135677764311


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCCCC-ccceEEEEECCCCCEEEEEecC
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .         .     ..+..|++|.|+  |+++++++++++|+++...+... ..++.+||+|||||.|||++..
T Consensus        62 ~---------~-----~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           62 L---------A-----ERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             C---------S-----SCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             C---------C-----CCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            0         0     126689999999  99999999999999988765432 2346799999999999999864

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.81  E-value=5.8e-19  Score=116.85  Aligned_cols=113  Identities=12%  Similarity=0.131  Sum_probs=80.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      ++++|+.|.|+|++++++||+++||+++....  .  .  ..++..+                   ...+.+..  ....
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~--~--~--~~~~~~~-------------------~~~l~l~~--~~~~   56 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAN--D--G--FAQFTIG-------------------SHCLMLSQ--NHLV   56 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEE--T--T--EEEEEET-------------------TEEEEEES--SCSS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeC--C--C--EEEEEeC-------------------CeEEEEEc--CCCC
Confidence            58999999999999999999999999987642  1  2  2233322                   22343321  1100


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                       +    ..   ....+ .|++|.|+|+++++++|+++|+++..+|...+++ +.+||+|||||.|||++.
T Consensus        57 -~----~~---~~~~~-~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           57 -P----LE---NFQSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             -S----CC---CCCSC-EEEEEECSCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             -C----cc---cCCCe-EEEEEEECCHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEec
Confidence             0    00   01123 4899999999999999999999987766443333 678999999999999875

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.81  E-value=2e-18  Score=117.80  Aligned_cols=115  Identities=19%  Similarity=0.257  Sum_probs=85.8

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++.....  .    ..++..+                   +..++|........
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~-------------------~~~l~l~~~~~~~~   57 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T----GAYLTCG-------------------DLWVCLSYDEARQY   57 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T----EEEEEET-------------------TEEEEEEECTTCCC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C----cEEEEEC-------------------CEEEEEEECCCCCC
Confidence            489999999999999999999999999987642  1    1233332                   34567765322110


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                            .   .....+..|++|.|+  |+++++++|+++|+++...+..  .++.+||+|||||.|||++...
T Consensus        58 ------~---~~~~~~~~hi~~~v~~~d~~~~~~~l~~~G~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~~  119 (141)
T 1npb_A           58 ------V---PPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS--EGASFYFLDPDGHKLELHVGSL  119 (141)
T ss_dssp             ------C---CGGGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCS--SSEEEEEECTTCCEEEEEECCH
T ss_pred             ------C---CCCCCCceEEEEEeCHHHHHHHHHHHHHCCCeEeccCCC--ceeEEEEECCCCCEEEEEECch
Confidence                  0   011236689999997  9999999999999999877643  3567899999999999998754

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.81  E-value=2.1e-19  Score=123.93  Aligned_cols=123  Identities=12%  Similarity=0.063  Sum_probs=78.3

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      ++.||+|.|+|+++|++||+++ |+.........  .........                    ...+.+.........
T Consensus         9 rl~~V~L~V~Dl~~s~~FY~~l-g~~~~~~~~~~--~~~~~~~~~--------------------~~~~~~~~~~~~~~~   65 (149)
T 4gym_A            9 RLTFVNLPVADVAASQAFFGTL-GFEFNPKFTDE--SCACMVVSE--------------------QAFVMLIDRARFADF   65 (149)
T ss_dssp             CCEEEEEEESCHHHHHHHHHHT-TCEECGGGCBT--TEEEEEEET--------------------TEEEEEEEHHHHGGG
T ss_pred             cEEEEEEEeCCHHHHHHHHHHh-CCCcceeecCC--ceeEEeecC--------------------cceEeeecccccccc
Confidence            8999999999999999999884 55554432222  221111111                    223333321100000


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .   ..........+..|++|.|+   ++++++++++++|+.+..+|.+..+++.+||+|||||+|||+...
T Consensus        66 ~---~~~~~~~~~~~~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~~  134 (149)
T 4gym_A           66 T---SKPIADATATTEAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWMS  134 (149)
T ss_dssp             C---SSCBCCTTTCBSCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEEC
T ss_pred             c---cccCCCCCCCCeeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEEC
Confidence            0   00001111224469999996   588899999999999998886655667899999999999998643

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.81  E-value=1.9e-18  Score=116.89  Aligned_cols=118  Identities=17%  Similarity=0.131  Sum_probs=82.3

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      ++++|++|.|+|++++++||+++|||++.....    .+  ..+...                   +..+.+........
T Consensus         8 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~-------------------g~~~~l~~~~~~~~   62 (135)
T 3rri_A            8 NDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DR--ITLDFF-------------------GDQLVCHLSDRWDR   62 (135)
T ss_dssp             TSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEET-------------------TEEEEEEECSCSCS
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----Cc--EEEEEe-------------------CCEEEEEEcCcccc
Confidence            589999999999999999999999999966532    22  222211                   22355543221110


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCC---C-cc-ceEEEEECCCCCEEEEEecCcc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG---G-KL-KGVAFIKDPDDYWIEIFDLKTI  163 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~---~-~~-~~~~~~~DPdG~~iel~~~~~~  163 (170)
                           +      ...+..|++|.+.   |+++++++|+++|+++...|..   + .. .+.+||+|||||.|||.+....
T Consensus        63 -----~------~~~~~~h~~~~~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~  131 (135)
T 3rri_A           63 -----E------VSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDD  131 (135)
T ss_dssp             -----S------CCSSSCEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSG
T ss_pred             -----c------CCCCCCeEEEEEcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECCh
Confidence                 0      1124579999996   5999999999999998765532   2 22 2578999999999999987654


Q ss_pred             cc
Q 030857          164 GK  165 (170)
Q Consensus       164 ~~  165 (170)
                      ..
T Consensus       132 ~~  133 (135)
T 3rri_A          132 RM  133 (135)
T ss_dssp             GG
T ss_pred             hh
Confidence            43

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.81  E-value=4.3e-19  Score=116.55  Aligned_cols=108  Identities=14%  Similarity=0.186  Sum_probs=80.0

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      ++++|+.|.|+|++++++||+++|||++....   +..  .+++..++                  +..+.+......+ 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~--~~~~~~~~------------------~~~l~l~~~~~~~-   57 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GNA--FAVMRDND------------------GFILTLMKGKEVQ-   57 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TTT--EEEEECTT------------------CCEEEEEECSSCC-
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CCc--EEEEEcCC------------------CcEEEEEeCCCCC-
Confidence            57999999999999999999999999998652   112  23444321                  3456665431110 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEE
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  158 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  158 (170)
                                   ..+..|++|.|   +|+++++++++++|+++.. |.... ++.+|++|||||.|||+
T Consensus        58 -------------~~~~~~~~~~v~~~~d~~~~~~~l~~~G~~~~~-p~~~~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           58 -------------YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEP-PKHAH-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             -------------CCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCC-CEEC--CEEEEEEETTTEEEEEE
T ss_pred             -------------CCceeEEEEEcCCHHHHHHHHHHHHHCCCEEec-CcCCC-cEEEEEECCCCcEEEEe
Confidence                         12568999999   8999999999999999754 43222 57889999999999996

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.80  E-value=6.2e-19  Score=116.70  Aligned_cols=110  Identities=17%  Similarity=0.242  Sum_probs=79.0

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      ++ |+.|.|+|++++++||+++||+++...   .+  + ..++..++.                +...+.+...  ... 
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~---~~--~-~~~~~~~~~----------------~~~~l~l~~~--~~~-   61 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMD---HG--W-IVTHASPLE----------------AHAQVSFARE--GGS-   61 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEE---CS--S-EEEEEEEEE----------------EEEEEEEESS--SBT-
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEec---CC--E-EEEEecCCC----------------CcEEEEEEcC--CCC-
Confidence            46 999999999999999999999999774   11  1 222222110                0234544321  100 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                                  ..+..|++|.|+|+++++++++++|+++..++...+++ +.+|++|||||.|||++.
T Consensus        62 ------------~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           62 ------------GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             ------------TBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             ------------CCceeEEEEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence                        01447999999999999999999999987766443343 678999999999999985

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.80  E-value=1.9e-18  Score=118.92  Aligned_cols=116  Identities=20%  Similarity=0.254  Sum_probs=81.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++....   + .+  .++..+                   ...+++........
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~-~~--~~l~~g-------------------~~~l~l~~~~~~~~   80 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---E-DR--KALCFG-------------------DQKFNLHEVGKEFE   80 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEET-------------------TEEEEEEETTSCCS
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---C-Cc--eEEEEC-------------------CcEEEEEEcCCCcC
Confidence            58999999999999999999999999998642   2 22  222222                   24566654322211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC-CHHHHHHHHHhcCCeEeecCCC--Cc--cceEEEEECCCCCEEEEEe
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDG--GK--LKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~-di~~~~~~l~~~G~~~~~~~~~--~~--~~~~~~~~DPdG~~iel~~  159 (170)
                       +.      ......+..|++|.+. |+++++++|+++|+++...|..  +.  ..+.+||+|||||.|||.+
T Consensus        81 -~~------~~~~~~g~~~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           81 -PK------AAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             -SC------CSSCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             -cc------cCCCCCCCceEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence             00      0011225578999886 9999999999999998765521  11  1247899999999999986

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.79  E-value=4.8e-18  Score=113.88  Aligned_cols=111  Identities=16%  Similarity=0.249  Sum_probs=81.5

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      ...++.|.|+|++++++||++ ||+++..+    +..+  .++..+                   +..++|.......+ 
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~~--~~~~~~-------------------~~~l~l~~~~~~~~-   55 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFR----DAGW--MILQRG-------------------DLMLEFFAHPGLDP-   55 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEE----CSSE--EEEEET-------------------TEEEEEEECTTCCG-
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEec----CCCE--EEEEeC-------------------CEEEEEEeCCCCCC-
Confidence            356899999999999999998 99999865    1222  233322                   34677754322100 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeE-------eecCCCCccc-eEEEEECCCCCEEEEEecCc
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF-------AKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~-------~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~  162 (170)
                                  ..+..|++|.|+|+++++++++++|+++       ..+|...+++ +.+|++|||||.|||++...
T Consensus        56 ------------~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           56 ------------LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             ------------GGCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECCC
T ss_pred             ------------CCcceEEEEEECCHHHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecchh
Confidence                        0245799999999999999999999984       5555443444 67899999999999998765

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.79  E-value=9.8e-19  Score=116.71  Aligned_cols=109  Identities=11%  Similarity=0.045  Sum_probs=81.2

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      +..++.|.|+|++++++||+++|||++...   . .++  .++..+                   +..+.|......+  
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~---~-~~~--~~~~~~-------------------~~~l~l~~~~~~~--   57 (122)
T 1qto_A            5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFG---D-RDF--AGVRRG-------------------DIRLHISRTEHQI--   57 (122)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHTTCCEEEEE---C-SSE--EEEEET-------------------TEEEEEEECSCHH--
T ss_pred             cceeEEEEcCCHHHHHHHHHhccCcEEeeC---C-CCE--EEEEEC-------------------CEEEEEEcCCCCC--
Confidence            456899999999999999999999999865   1 122  233322                   3567765422110  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhc------CC--eEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL------GV--EFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~------G~--~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                           .       ....|++|.|+|+++++++++++      |+  ++..++...++++.++|+|||||.|||.++
T Consensus        58 -----~-------~~~~~~~~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           58 -----V-------ADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             -----H-------HTTCEEEEEESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTSCEEEEEEC
T ss_pred             -----C-------CCceEEEEEECCHHHHHHHHHhhccccccCccccccCCCcCCCCCcEEEEECCCCCEEEEecC
Confidence                 0       12369999999999999999999      99  877766544455778999999999999985

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.79  E-value=1.1e-18  Score=118.74  Aligned_cols=124  Identities=19%  Similarity=0.202  Sum_probs=85.4

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||++ |||++..+..  ...+  ..+..+                  ++..+.+........
T Consensus         3 ~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~--~~~~~~------------------~~~~l~l~~~~~~~~   59 (138)
T 2a4x_A            3 ARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPH--TEAVLD------------------GGIRLAWDTVETVRS   59 (138)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSE--EEEECT------------------TSCEEEEEEHHHHHH
T ss_pred             ceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCce--EEEEcC------------------CCeEEEEecCccchh
Confidence            5899999999999999999998 9999876532  1122  222221                  135677764211000


Q ss_pred             -CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEecCcc
Q 030857           92 -DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKTI  163 (170)
Q Consensus        92 -~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~~  163 (170)
                       .+...     .....+..|++|.|+   |+++++++|+++|+++..+|....++ +.+||+|||||.|||++..++
T Consensus        60 ~~~~~~-----~~~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~  131 (138)
T 2a4x_A           60 YDPEWQ-----APTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLPL  131 (138)
T ss_dssp             HCTTCC-----CCBSSCSEEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEECTT
T ss_pred             hCcccC-----CCCCCCeEEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCCcc
Confidence             00000     011136689999999   99999999999999988766443343 578999999999999987643

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.79  E-value=3.1e-18  Score=132.85  Aligned_cols=117  Identities=23%  Similarity=0.383  Sum_probs=90.1

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecC-----------CcceEEEeeeccCCCCCCCCcccceeeecCCCcE
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT   80 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (170)
                      ++++|++|.|+|+++|++||+++|||++..+...+           +..+..++++.++..               ....
T Consensus        26 ~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~---------------~~~~   90 (330)
T 3zi1_A           26 RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPED---------------DHFV   90 (330)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTT---------------TCCE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCC---------------CccE
Confidence            58999999999999999999999999998876554           445667777664321               1467


Q ss_pred             EEEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           81 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        81 lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      ++|....+...      ...+    .++.|++|.|+|+   +++++++|+++...+.     +.+||+|||||.|||++.
T Consensus        91 leL~~~~~~~~------~~~~----~g~~hiaf~V~d~---~~~l~~~G~~~~~~~~-----~~~~~~DPdG~~iel~~~  152 (330)
T 3zi1_A           91 AELTYNYGVGD------YKLG----NDFMGITLASSQA---VSNARKLEWPLTEVAE-----GVFETEAPGGYKFYLQNR  152 (330)
T ss_dssp             EEEEEETTCCC------CCBC----SSEEEEEEECHHH---HHHHHHHTCCCEEEET-----TEEEEECTTSCEEEEESS
T ss_pred             EEEeccCCCCc------cccC----CCeeEEEEECchH---HHHHHHcCCceeccCC-----ceEEEECCCCCEEEEEec
Confidence            88877544321      2222    2789999999987   6778889999887652     258899999999999997


Q ss_pred             C
Q 030857          161 K  161 (170)
Q Consensus       161 ~  161 (170)
                      .
T Consensus       153 ~  153 (330)
T 3zi1_A          153 S  153 (330)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.78  E-value=3e-18  Score=118.30  Aligned_cols=121  Identities=17%  Similarity=0.134  Sum_probs=86.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++....    ..  .+++..+                   +..++|........
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~--~~~~~~~-------------------~~~l~l~~~~~~~~   58 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PE--IIFYQMN-------------------GFVLATWLVQNLQE   58 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SS--EEEEECS-------------------SSEEEEEEHHHHHH
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CC--EEEEEcC-------------------CEEEEEEecccccc
Confidence            47999999999999999999999999987753    12  2333322                   35677765421100


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCeEeecCCCCcc-ceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~~  162 (170)
                      ...   ...  ....+..|++|.|   +|+++++++|+++|+++..+|...++ .+.+||+|||||.|||++...
T Consensus        59 ~~~---~~~--~~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           59 DVG---VAV--TSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             HHS---SCC--CSSCCSCEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECTT
T ss_pred             ccC---CCC--CCCCCeEEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCCC
Confidence            000   000  0012567999999   89999999999999999876644333 367899999999999998643

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.78  E-value=5e-18  Score=115.09  Aligned_cols=117  Identities=15%  Similarity=0.160  Sum_probs=80.9

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .+...+..|.|+|+++|++||+++|||++..+..  .    .+++..+                   +..+++.......
T Consensus         5 ~~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~l~~~-------------------~~~l~l~~~~~~~   59 (134)
T 3fcd_A            5 DIHQITPFLHIPDMQEALTLFCDTLGFELKYRHS--N----YAYLELS-------------------GCGLRLLEEPARK   59 (134)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEET--T----EEEEEET-------------------TEEEEEEECCCC-
T ss_pred             hhhcceeEEEECCHHHHHHHHHhccCcEEEEeCC--C----eEEEEEC-------------------CEEEEEEeCCCCC
Confidence            3466788999999999999999999999987632  1    2333332                   3567776543221


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCC----eEeecCCCCccc-eEEEEECCCCCEEEEEecCc
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV----EFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~----~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~  162 (170)
                      .      ...+    .+..|++|.|+|+++++++++++|+    ++..++...+++ +.+||+|||||.|||.+...
T Consensus        60 ~------~~~~----~~~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           60 I------IPDG----IARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             ------------------EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             c------CCCC----CceEEEEEEeCCHHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEccc
Confidence            1      0001    1336999999999999999996654    445455444444 67899999999999998754

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.77  E-value=8.5e-18  Score=114.69  Aligned_cols=117  Identities=17%  Similarity=0.156  Sum_probs=80.6

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec-----c
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN-----W   87 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~-----~   87 (170)
                      +++|+.|.|+|++++++||+++|||++..+...+  .+  .++..+                   +..+.+...     .
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~--~~~~~~-------------------~~~l~l~~~~~~~~~   64 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP--IF--RGLDTG-------------------KSCIGFNAHEAYELM   64 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT--TE--EEEECS-------------------SSEEEEECTHHHHHT
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC--ce--EEeecC-------------------CEEEEEcCccccccc
Confidence            8999999999999999999999999987543212  22  222221                   234444321     0


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCcc-ceEEEEECCCCCEEEEEecC
Q 030857           88 GTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  161 (170)
                      ....      . .. ....+ .|++|.|+   |+++++++|+++|+++..+|...++ ++.+||+|||||.|||++..
T Consensus        65 ~~~~------~-~~-~~~~~-~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           65 QLAQ------F-SE-TSGIK-FLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             TCGG------G-CC-CBSCC-EEEEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             cccc------c-CC-CCCCe-EEEEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence            0000      0 00 01124 49999999   5999999999999998877644333 46789999999999999864

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.77  E-value=2.2e-17  Score=113.61  Aligned_cols=118  Identities=14%  Similarity=0.230  Sum_probs=84.3

Q ss_pred             eeeeEEEEEeCChHHHHHHH---HHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           12 RFPHFTMFRIKDPKVSLDFY---SRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      .+++|++|.|+|++++++||   +++|||++..+..  . .  ..|+. +                   +..++|.....
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~-~--~~~~~-g-------------------~~~l~l~~~~~   73 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--R-G--KSYKH-G-------------------KTYLVFVQTED   73 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--T-E--EEEEE-T-------------------TEEEEEEECCG
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--C-C--ceEec-C-------------------CeEEEEEEcCC
Confidence            48999999999999999999   9999999987642  1 1  12333 1                   35677765432


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEee-cCCC---CccceEEEEECCCCCEEEEEec
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAK-KPDG---GKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~-~~~~---~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      +....   +..   ....++.|++|.|+   |+++++++|+++|+++.. .|..   +...+.+||+|||||.|||+++
T Consensus        74 ~~~~~---~~~---~~~~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           74 RFQTP---TFH---RKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             GGSCS---CCC---TTSSSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             Ccccc---ccc---ccCCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            10000   011   11136689999999   999999999999999887 3432   2234578999999999999863

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.76  E-value=2.2e-18  Score=117.41  Aligned_cols=119  Identities=21%  Similarity=0.164  Sum_probs=80.9

Q ss_pred             CCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEE-----
Q 030857            9 CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL-----   83 (170)
Q Consensus         9 ~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel-----   83 (170)
                      ...++++|+.|.|+|++++++||+++||+++..+.  +  .+ .. +..                    +..+..     
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~-~~-~~~--------------------g~~l~~~~~~~   57 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G--SF-VL-FET--------------------GFAIHEGRSLE   57 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S--SE-EE-ETT--------------------SCEEEEHHHHH
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C--Cc-EE-Eec--------------------cceeccCchhh
Confidence            44568999999999999999999999999998653  1  11 12 211                    122221     


Q ss_pred             EeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEecC
Q 030857           84 THNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  161 (170)
                      ...........   .    ....+..|++|.|+|++++++++++ |+++..+|...+++ +.+||+|||||.|||++..
T Consensus        58 ~~~~~~~~~~~---~----~~~~~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           58 ETIWRTSSDAQ---E----AYGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             HHHHSCCC--C---C----CSCCSSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             hhccccCCccc---c----ccCCCceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            11000000000   0    0112568999999999999999999 99988766444444 6789999999999999875

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.75  E-value=4.1e-17  Score=126.85  Aligned_cols=126  Identities=20%  Similarity=0.198  Sum_probs=88.9

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC-cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ..+++||+|.|+|++++++||+++|||++..+....+ ......+++....               ..+..++++.....
T Consensus         6 i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g---------------~~g~~l~l~~~~~~   70 (335)
T 3oaj_A            6 TMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGG---------------KPGTIITFFPWAGA   70 (335)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTC---------------CTTSEEEEEECTTC
T ss_pred             CCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCC---------------CCCcEEEEEECCCC
Confidence            3489999999999999999999999999988754322 2222233332110               01357888754322


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      ..         +.....++.|++|.|+  |+++++++|+++|+++..  ......+.+||+|||||.|||++...
T Consensus        71 ~~---------~~~~~~~~~hiaf~V~~~dl~~~~~rL~~~Gv~~~~--~~~~g~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           71 RQ---------GVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK--IERFGEQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             CB---------CBCCBSEEEEEEEEECTTCHHHHHHHHHHTTCCCEE--EEETTEEEEEEECTTSCEEEEEECSC
T ss_pred             CC---------CCCCCCceEEEEEEecHHHHHHHHHHHHhCcceeee--eccCCcEEEEEECCCCCEEEEEEeCC
Confidence            11         0111236789999999  999999999999999875  21222457999999999999998753

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.74  E-value=7.2e-17  Score=125.53  Aligned_cols=120  Identities=14%  Similarity=0.143  Sum_probs=88.8

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ...+++|++|.|+|++++++||+++|||++..... .++.....|+..+..                 ...+.+.....+
T Consensus       150 ~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~-----------------~~~l~~~~~~~~  211 (339)
T 3lm4_A          150 PVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL-----------------GHEVACMRDMTG  211 (339)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS-----------------SCSEEEEECTTS
T ss_pred             CcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC-----------------ceEEEEeccCCC
Confidence            34689999999999999999999999999988755 333345566664331                 234566532111


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCC-Cc-cceEEEEECCCCCEEEEEecC
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                                    ...+++|++|.|+|   +++++++|+++|+++...|.. +. ..+++||+|||||.|||+...
T Consensus       212 --------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          212 --------------GHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             --------------CCSEEEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             --------------CCCceeEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence                          11267999999999   888999999999998866632 22 135799999999999998654

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.74  E-value=9.1e-17  Score=122.88  Aligned_cols=120  Identities=15%  Similarity=0.226  Sum_probs=83.2

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ...+++|+.|.|+|++++++||+++|||++..............|+.....                 ...+++...  +
T Consensus       147 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~--~  207 (307)
T 1mpy_A          147 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK-----------------AHDVAFIHH--P  207 (307)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB-----------------SCSEEEEEC--S
T ss_pred             CcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC-----------------ceeEEEecC--C
Confidence            456899999999999999999999999999876432221112234443211                 123444321  1


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCC-C-ccceEEEEECCCCCEEEEEecCc
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG-G-KLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~-~-~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      .              ++...|++|.|+   |+++++++|+++|+++...|.. + ..++.+||+|||||.|||++...
T Consensus       208 ~--------------~g~~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          208 E--------------KGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             S--------------SSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             C--------------CCcceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence            0              113689999999   5777789999999998765532 1 22457899999999999998754

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.73  E-value=1e-16  Score=109.80  Aligned_cols=123  Identities=15%  Similarity=0.140  Sum_probs=79.4

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   93 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   93 (170)
                      -..+.|.|+|+++|++||+++|||++.....  ...+  .++..+                   +..++|....+...  
T Consensus         6 ~~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~~~--~~l~~g-------------------~~~l~l~~~~~~~~--   60 (145)
T 2rk9_A            6 RVVPELYCFDINVSQSFFVDVLGFEVKYERP--DEEF--VYLTLD-------------------GVDVMLEGIAGKSR--   60 (145)
T ss_dssp             CEEEEEEESSHHHHHHHHHHTTCCEEEEEEG--GGTE--EEEEET-------------------TEEEEEEEC-------
T ss_pred             cceEEEEECCHHHHHHHHHhccCCEEEeecC--CCCE--EEEEcC-------------------CeEEEEEeccCCCc--
Confidence            3578999999999999999999999986422  1122  333322                   34566654311110  


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC--------CccceEEEEECCCCCEEEEEecCc
Q 030857           94 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFER-LGVEFAKKPDG--------GKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        94 ~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~--------~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      .+...........++ +++|.|+|+++++++|++ +|+++...|..        ...++.++|+|||||.|||++...
T Consensus        61 ~~~~~~~~~~~~~g~-~~~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           61 KWLSGDLEFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             ------CCSSTTTTE-EEEEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             ccccCccccCCCCce-EEEEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            000000000111244 499999999999999999 99998866542        223467889999999999998754

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.73  E-value=1.9e-16  Score=122.29  Aligned_cols=118  Identities=15%  Similarity=0.178  Sum_probs=85.5

Q ss_pred             CCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857            9 CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus         9 ~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ....+++|+.|.|+|++++++|| ++|||++........+.....|+..+..                 ...+.+...  
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~-----------------~~~~~~~~~--  207 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT-----------------VHDTALTGG--  207 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS-----------------SCSEEEEES--
T ss_pred             CCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC-----------------cccEEEeCC--
Confidence            44578999999999999999999 9999999876554333334556554321                 223444321  


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCC--eEeecC-CCCc-cceEEEEECCCCCEEEEEecC
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGV--EFAKKP-DGGK-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~--~~~~~~-~~~~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                      +              . .+++|++|.|+|+++   ++++|+++|+  ++...| .... ...++||+|||||.|||...+
T Consensus       208 ~--------------~-~~~~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          208 N--------------G-PRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             S--------------B-SEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             C--------------C-CCceEEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            1              0 167899999999999   9999999999  887543 2222 234689999999999998654

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.72  E-value=1.9e-16  Score=121.28  Aligned_cols=120  Identities=15%  Similarity=0.122  Sum_probs=85.1

Q ss_pred             CCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC-cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857            9 CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus         9 ~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      ....+++|++|.|+|++++++||+++|||++......+. ......|+..+..                 ...+.+... 
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~-  208 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK-----------------VHDIAFVEY-  208 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS-----------------SCSEEEEEC-
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC-----------------ceeEEEecC-
Confidence            345789999999999999999999999999987654332 2244556654321                 223344321 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCeEeecCCC-Cc-cceEEEEECCCCCEEEEEecC
Q 030857           88 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                       +.              ..+++|++|.|+|+++   ++++|+++|+++...|.. .. ..+++||+|||||+|||...+
T Consensus       209 -~~--------------~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          209 -PE--------------KGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             -SS--------------TTEEEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             -CC--------------CCceeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence             10              1257899999998664   678999999998765532 21 235789999999999998764

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.72  E-value=2.8e-16  Score=121.87  Aligned_cols=119  Identities=20%  Similarity=0.291  Sum_probs=87.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      -.+.|+.|.|+|++++++||+++|||++.......+    .+++..++.                 ...+++.....+  
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~-----------------~~~l~l~~~~~~--  214 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ----RALLGYADN-----------------QCKLELQGVKGG--  214 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTTT----EEEEESSTT-----------------SCEEEEEECSSC--
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCc-----------------eEEEEECCCCCC--
Confidence            368999999999999999999999999998754332    344554432                 346776543321  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCCC----Cc-cceEEEEECCCCCEEEEEecCcc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG----GK-LKGVAFIKDPDDYWIEIFDLKTI  163 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~----~~-~~~~~~~~DPdG~~iel~~~~~~  163 (170)
                            ...    ..++.|++|.|+  |+++++++|+++|+++..++..    +. ..+.+||+|||||.|||++....
T Consensus       215 ------~~~----~~~~~hiaf~v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~  283 (330)
T 3zi1_A          215 ------VDH----AAAFGRIAFSCPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAF  283 (330)
T ss_dssp             ------CCC----BTTCCEEEEEECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHH
T ss_pred             ------CCC----CCCCceEEEEEEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEeccc
Confidence                  111    126679999995  7999999999999998765422    12 23678999999999999987543

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.71  E-value=1.6e-16  Score=121.18  Aligned_cols=119  Identities=19%  Similarity=0.243  Sum_probs=83.3

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC--------c-ceEEEeeeccCCCCCCCCcccceeeecCCCcEE
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------M-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATI   81 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   81 (170)
                      ..+++|++|.|+|++++++||+++|||++......+.        + .....|+..+..                 ...+
T Consensus       140 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~-----------------~~~~  202 (300)
T 2zyq_A          140 EQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPR-----------------HHSL  202 (300)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSB-----------------SCSE
T ss_pred             CCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCC-----------------ccEE
Confidence            4689999999999999999999999999976432221        1 123444443211                 2234


Q ss_pred             EEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCeEeecCCC-C-ccceEEEEECCCCCEEE
Q 030857           82 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDG-G-KLKGVAFIKDPDDYWIE  156 (170)
Q Consensus        82 el~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~-~-~~~~~~~~~DPdG~~ie  156 (170)
                      .+...  +              ...++.|++|.|+|+++   ++++|+++|+++...|.. . ..++.+||+|||||.||
T Consensus       203 ~~~~~--~--------------~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iE  266 (300)
T 2zyq_A          203 AFLPM--P--------------TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIE  266 (300)
T ss_dssp             EEESS--C--------------CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEE
T ss_pred             EEecC--C--------------CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEE
Confidence            55321  1              01267899999998665   599999999998876532 1 12457899999999999


Q ss_pred             EEecCc
Q 030857          157 IFDLKT  162 (170)
Q Consensus       157 l~~~~~  162 (170)
                      |++...
T Consensus       267 l~~~~~  272 (300)
T 2zyq_A          267 FGCEGR  272 (300)
T ss_dssp             EEECCC
T ss_pred             EEeCCe
Confidence            997653

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.71  E-value=9.1e-17  Score=110.55  Aligned_cols=122  Identities=14%  Similarity=0.140  Sum_probs=76.8

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++|+.|.|+|++++++||+++|||++.......+ .+.. + +                      ..+.+. ...+.
T Consensus        19 ~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~-~-g----------------------~~l~l~-~~~~~   72 (148)
T 3bt3_A           19 VVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GFGD-Y-G----------------------CVFDYP-SEVAV   72 (148)
T ss_dssp             EEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SCEE-E-E----------------------EEESSC-TTTTS
T ss_pred             eEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-CccE-E-c----------------------cEEEEe-ccCCC
Confidence            3589999999999999999999999999964222111 2221 1 2                      012220 01110


Q ss_pred             CCC-CCCC--CCCCCCCCCCceEEEE-EeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEecC
Q 030857           91 SDP-DFKG--YHNGNSEPRGFGHIGI-TVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        91 ~~~-~~~~--~~~~~~~~~g~~hl~f-~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  161 (170)
                      ... ....  +..+.   ....+.+| .|+|+++++++|+++|+++..+|...+++ +.+||+|||||.|||.+..
T Consensus        73 ~~~~~~~~~~~~~g~---~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           73 AHLTPFRGFHLFKGE---PIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CC--CCCSEEEEESC---CCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             cccccccccceeecc---CCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence            000 0000  00000   01123365 99999999999999999988776444444 5789999999999999864

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.71  E-value=3e-16  Score=122.03  Aligned_cols=117  Identities=20%  Similarity=0.294  Sum_probs=84.5

Q ss_pred             CCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857            7 TSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus         7 ~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      +.....+++|+.|.|+|++++++||+++|||++..+..   .  ..++...++.                ....+.+...
T Consensus         5 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~--~~~l~~~~~~----------------~~~~l~l~~~   63 (339)
T 3lm4_A            5 ARFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q--SVYLRGYEDP----------------YPWSLKITEA   63 (339)
T ss_dssp             GGGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T--EEEEECTTCS----------------SSCSEEEEEC
T ss_pred             CCCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C--EEEEEecCCC----------------CceEEEEeeC
Confidence            33455689999999999999999999999999987621   1  1222221111                0233444321


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           87 WGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                        .               ..++.|++|.|+|   +++++++|+++|+++...+.....++.+||+|||||.|||+...
T Consensus        64 --~---------------~~g~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~  124 (339)
T 3lm4_A           64 --P---------------EAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWEA  124 (339)
T ss_dssp             --S---------------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECCB
T ss_pred             --C---------------CCCcceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEee
Confidence              1               0167899999997   99999999999999987765333356789999999999998753

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.71  E-value=5.5e-16  Score=120.30  Aligned_cols=127  Identities=15%  Similarity=0.148  Sum_probs=86.1

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC-cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ..+++|++|.|+|+++|++||+++|||++.......+ ......++..+..               .....+.+......
T Consensus        28 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g---------------~~~~~l~l~~~~~~   92 (338)
T 1zsw_A           28 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTG---------------SPGTELSFFEIPLV   92 (338)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTC---------------CTTSEEEEEECTTC
T ss_pred             CccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCC---------------CCCCEEEEEECCCC
Confidence            4689999999999999999999999999987642111 1122222322110               01346666543221


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      ..         ......+..|++|.|+   |+++++++|+++|+++...+.. ...+.+||+|||||.|||++...
T Consensus        93 ~~---------~~~~~~~~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~~-~G~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A           93 GR---------TYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTY-ANRPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             CB---------CBCCBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEE-TTEEEEEEECTTCCEEEEEECTT
T ss_pred             cc---------CcCCCCCeeeEEEEcCCHHHHHHHHHHHHHCCCcccccccc-CCcEEEEEECCCCCEEEEEEcCC
Confidence            10         0011236789999998   6999999999999998765431 11267899999999999998753

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.70  E-value=3.8e-16  Score=120.57  Aligned_cols=123  Identities=17%  Similarity=0.192  Sum_probs=87.9

Q ss_pred             CCCCCC----CCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeec-cCCCCCCCCcccceeeec
Q 030857            1 MKLPTD----TSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY-EDTASAPADPVDRTVWTF   75 (170)
Q Consensus         1 ~~~~~~----~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   75 (170)
                      |-|+.+    +.....+++|+.|.|+|++++++||+++|||++..+.   + .  ..++.. +..               
T Consensus         1 m~m~~p~~~~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~---~-~--~~~l~~~~~~---------------   59 (323)
T 1f1u_A            1 MTNFVPTPSVPAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEED---E-N--TIYLRSLEEF---------------   59 (323)
T ss_dssp             -CCCCCCCSSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC---S-S--EEEEECTTCC---------------
T ss_pred             CCCCCCCCCCCCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeec---C-C--EEEEEecCCC---------------
Confidence            556666    3334568999999999999999999999999998753   1 1  223332 110               


Q ss_pred             CCCcEEEEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCeEeecCC-CC-ccceEEEEECC
Q 030857           76 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD-GG-KLKGVAFIKDP  150 (170)
Q Consensus        76 ~~~~~lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~-~~-~~~~~~~~~DP  150 (170)
                       ....+.+...  ..               .++.|++|.|   +|+++++++|+++|+++...+. .. ..++.++|+||
T Consensus        60 -~~~~l~l~~~--~~---------------~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP  121 (323)
T 1f1u_A           60 -IHHNLVLRQG--PI---------------AAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDP  121 (323)
T ss_dssp             -SSCSEEEEEC--SS---------------CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECT
T ss_pred             -CcEEEEEEEC--CC---------------CCeeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECC
Confidence             0234555321  10               1568999999   7899999999999999987765 22 23467899999


Q ss_pred             CCCEEEEEecCc
Q 030857          151 DDYWIEIFDLKT  162 (170)
Q Consensus       151 dG~~iel~~~~~  162 (170)
                      +||.|||++...
T Consensus       122 ~G~~iel~~~~~  133 (323)
T 1f1u_A          122 LGFPYEFFYETE  133 (323)
T ss_dssp             TSCEEEEECCBC
T ss_pred             CCCEEEEEEecc
Confidence            999999998653

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.70  E-value=3.1e-16  Score=120.17  Aligned_cols=113  Identities=19%  Similarity=0.300  Sum_probs=82.6

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeec-cCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY-EDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .+++|+.|.|+|++++++||+++|||++..+..  ...   .++.. ++.                .+..+.+...  ..
T Consensus         7 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~---~~l~~~~~~----------------~~~~l~l~~~--~~   63 (309)
T 3hpy_A            7 LRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QGR---VYFKCWDER----------------DHSCYIIREA--DT   63 (309)
T ss_dssp             EEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TSC---EEEECTTCC----------------BSCSEEEEEC--SS
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CCe---EEEEeccCC----------------CceEEEEEeC--CC
Confidence            589999999999999999999999999987632  111   22221 110                0134444321  10


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCC--CccceEEEEECCCCCEEEEEecCc
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                                     .+..|++|.|+|   +++++++|+++|+++...+..  ...++.+||+|||||.|||++...
T Consensus        64 ---------------~~~~h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           64 ---------------AGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             ---------------CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             ---------------CceeEEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccc
Confidence                           166899999986   999999999999999876642  233567999999999999998653

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.70  E-value=3.1e-16  Score=119.09  Aligned_cols=120  Identities=14%  Similarity=0.129  Sum_probs=82.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCc-ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      -.++|+.|.|+|++++++||+++||+++......... .+...  ..++                  .....+.......
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~--~~~g------------------~~~~~l~~~~~~~   90 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMA--TLNG------------------EAVAAIAPMPPGA   90 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEE--EETT------------------EEEEEEEECCSCC
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEE--EeCC------------------eeeEeeccCCCCC
Confidence            3799999999999999999999999998875321110 23222  2111                  1223333221110


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCC-ccceEEEEECCCCCEEEEEecCc
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      +           .......+++|.|+|+++++++++++|+++...|... ..++.++|+||+||.|+|++...
T Consensus        91 ~-----------~~~~~~~~~~~~v~d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A           91 P-----------EGMPPIWNTYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             --------------CCCEEEEEEECSCHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEESS
T ss_pred             C-----------CCCCCcEEEEEEeCCHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEccc
Confidence            0           0011346899999999999999999999998776432 24577899999999999999764

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.69  E-value=2.6e-16  Score=120.32  Aligned_cols=115  Identities=18%  Similarity=0.266  Sum_probs=82.4

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++|+.|.|+|++++++||+++|||++..+..  ...   .++......               ....+.+.  ....
T Consensus         5 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~~---~~l~~~~~~---------------~~~~l~~~--~~~~   62 (307)
T 1mpy_A            5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGR---VYLKAWTEV---------------DKFSLVLR--EADE   62 (307)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TSC---EEEECTTCC---------------BSCSEEEE--ECSS
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC--CCc---EEEEecCCC---------------CceEEEEc--cCCC
Confidence            4689999999999999999999999999987632  111   233322110               01122221  1110


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCeEeecCC-C-CccceEEEEECCCCCEEEEEecCc
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD-G-GKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~-~-~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                                     .+..|++|.|   +|+++++++++++|+++...+. . ...++.+||+|||||.|||++...
T Consensus        63 ---------------~~~~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  124 (307)
T 1mpy_A           63 ---------------PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (307)
T ss_dssp             ---------------CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             ---------------CCcceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcch
Confidence                           1568999999   7999999999999999987764 2 223467899999999999998643

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.69  E-value=5.8e-16  Score=117.57  Aligned_cols=116  Identities=15%  Similarity=0.161  Sum_probs=80.4

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .++.|+.|.|+|++++++||+++||+++......+...+  .++..++                  .....+. . ....
T Consensus       163 ~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~--~~~~~~~------------------~~~~~~~-~-~~~~  220 (282)
T 3oxh_A          163 GTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNY--RVLKAGD------------------AEVGGCM-E-PPMP  220 (282)
T ss_dssp             TSEEEEEEECSCHHHHHHHHHHHHCCEEEEC-------C--EEEEETT------------------EEEEEEE-C-CSST
T ss_pred             CccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcce--EEEEcCC------------------ccEeeec-C-CCCC
Confidence            468999999999999999999999999886431122222  2222211                  1122221 1 1100


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCcc-ceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  161 (170)
                                  ......|++|.|+|+++++++++++|+++...|...++ ++.+||+|||||.|+|++..
T Consensus       221 ------------~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          221 ------------GVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             ------------TCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             ------------CCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecC
Confidence                        01144799999999999999999999999877654344 56789999999999999875

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.69  E-value=5.2e-16  Score=119.19  Aligned_cols=114  Identities=13%  Similarity=0.208  Sum_probs=84.0

Q ss_pred             CCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857            9 CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus         9 ~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ....+++|+.|.|+|++++++||+++|||++.....  +   ...|+..+..                 ...+.+...  
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~-----------------~~~l~l~~~--  192 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSA-----------------HHRIAILPG--  192 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSB-----------------SCSEEEEES--
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCC-----------------cceEEEECC--
Confidence            345689999999999999999999999999987531  1   2344443221                 233444321  


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHH---HHHHHhcCCeEeecCCC-C-ccceEEEEECCCCCEEEEEecCc
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA---CERFERLGVEFAKKPDG-G-KLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~---~~~l~~~G~~~~~~~~~-~-~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      +                .+++|++|.|+|++++   +++|+++|+++...|.. . ..++++||+|||||.||+.+...
T Consensus       193 ~----------------~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          193 P----------------PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             S----------------SEEEEEEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             C----------------CceEEEEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCcc
Confidence            0                1678999999998777   99999999998766532 1 12357899999999999998654

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.69  E-value=7.8e-16  Score=119.63  Aligned_cols=119  Identities=9%  Similarity=0.081  Sum_probs=83.4

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ...+++||+|.|+|++++.+||+++|||++..+..    .. ..+.. ++.                 ...+.+....+.
T Consensus       150 ~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~----~~-~~~~~-g~~-----------------~~~l~l~~~~~~  206 (335)
T 3oaj_A          150 AIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG----DF-VRYRS-AGD-----------------IGNVIDLKLTPI  206 (335)
T ss_dssp             SCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET----TE-EEEEC-SSS-----------------SSCEEEEESSCC
T ss_pred             hhccccceEEEECCHHHHHHHHHHHhCCEEeeccC----CE-EEEEe-CCC-----------------CcEEEEEeCCCC
Confidence            34689999999999999999999999999988631    12 22221 211                 345666543221


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ..         +....++++|+||+|+|   ++++.++|+++|+++.... +..+..++||+||||++|||....
T Consensus       207 ~~---------~~~g~g~~~HiAf~v~d~~~l~~~~~~L~~~G~~~~~~~-~r~~~~siYfrDP~G~~iEl~td~  271 (335)
T 3oaj_A          207 GR---------GQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPVR-DRNYFNAIYFREHGEILFEIATDP  271 (335)
T ss_dssp             CB---------CBCSBTEEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCE-ECSSSEEEEEECTTSCEEEEEESC
T ss_pred             Cc---------CCCCCcceEEEEEEcCCHHHHHHHHHHHHHCCCCccccc-cCCcEEEEEEECCCCcEEEEEeCC
Confidence            11         11123468999999998   6678999999999864332 222346799999999999999863

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.68  E-value=5.1e-16  Score=118.19  Aligned_cols=118  Identities=17%  Similarity=0.207  Sum_probs=83.0

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeec---CCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDF---PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      ..+++|+.|.|+|++++++||+++|||++......   ++......|+..+..                 ...+.+... 
T Consensus       140 ~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~l~l~~~-  201 (297)
T 1lgt_A          140 EQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNER-----------------HHTLAIAAF-  201 (297)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEECC-
T ss_pred             ccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCC-----------------cceEEEEcC-
Confidence            46899999999999999999999999999765321   111123445543221                 233555421 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHH---HHHHhcCCeEeecCCCCcc--ceEEEEECCCCCEEEEEecCc
Q 030857           88 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~---~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~  162 (170)
                       +.              ..+..|++|.|+|++++.   ++ +++|+++...|.....  ..++||+|||||.|||++...
T Consensus       202 -~~--------------~~~~~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  265 (297)
T 1lgt_A          202 -PL--------------PKRIHHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSAR  265 (297)
T ss_dssp             -CC--------------SSSEEEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECCC
T ss_pred             -CC--------------CCCceEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCCE
Confidence             10              126789999999988776   88 9999999876633222  345899999999999998753

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.67  E-value=1.3e-15  Score=107.08  Aligned_cols=125  Identities=14%  Similarity=0.044  Sum_probs=79.3

Q ss_pred             ceeeeEEEEEeCC--hHHHHHHHHHhcCCEEeEeeecC-------CcceEEEeeeccCCCCCCCCcccceeeecCCCcEE
Q 030857           11 KRFPHFTMFRIKD--PKVSLDFYSRVLGMSLLKRLDFP-------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI   81 (170)
Q Consensus        11 ~~~l~hv~i~v~d--~~~s~~FY~~~lG~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   81 (170)
                      ++...++.|.|+|  +++|++||+++||+++......+       +..+....+..+                   +..+
T Consensus        22 ~~~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~-------------------g~~l   82 (166)
T 1xy7_A           22 VFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-------------------GSSF   82 (166)
T ss_dssp             CEEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET-------------------TEEE
T ss_pred             CCceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC-------------------CeEE
Confidence            4567899999999  99999999999999987643111       111112222221                   2345


Q ss_pred             EEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCC--ccceEEEEECCCCCEEEEEe
Q 030857           82 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        82 el~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iel~~  159 (170)
                      .+.... +..  .. +...+  ...+ .|++|.|+|+++++++|+++|++ ..++...  ++++.++|+||+||.|+|.+
T Consensus        83 ~l~~~~-~~~--~~-~~~~~--~~~g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~~r~~~v~DP~G~~~~l~~  154 (166)
T 1xy7_A           83 VVCDVS-SLP--GF-STAKS--EGSG-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVELGFKGKVTDPFGVTWIFAE  154 (166)
T ss_dssp             EEEEGG-GST--TC-CCCCT--TSCC-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             EEeCCC-ccc--CC-ccccC--CCCc-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcccEEEEEECCCCCEEEEEe
Confidence            554321 100  00 00000  0113 48999999999999999999999 8777654  44678899999999999998


Q ss_pred             cCc
Q 030857          160 LKT  162 (170)
Q Consensus       160 ~~~  162 (170)
                      ...
T Consensus       155 ~~~  157 (166)
T 1xy7_A          155 KKT  157 (166)
T ss_dssp             ---
T ss_pred             ecC
Confidence            653

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.67  E-value=7.9e-16  Score=117.15  Aligned_cols=111  Identities=15%  Similarity=0.239  Sum_probs=81.7

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++..+..  .    ..++..++.                 ...+.+..  ..  
T Consensus         3 ~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~-----------------~~~l~~~~--~~--   55 (297)
T 1lgt_A            3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSR-----------------AWRIAVQQ--GE--   55 (297)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSB-----------------SCSEEEEE--CT--
T ss_pred             eEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C----eEEEEeCCC-----------------cEEEEEec--CC--
Confidence            589999999999999999999999999987631  1    123333221                 12233321  11  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCC----CccceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                                   ..++.|++|.|+   |+++++++|+++|+++...+..    ...++.+||+|||||.|||++...
T Consensus        56 -------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           56 -------------VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             -------------TCEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             -------------CCCccEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECcc
Confidence                         115689999998   9999999999999998766532    123457899999999999998653

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.66  E-value=1.3e-15  Score=115.71  Aligned_cols=119  Identities=16%  Similarity=0.161  Sum_probs=81.4

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecC--Cc-ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      ...+++|++|.|+|++++++||+++|||++......+  .+ .....|+..+..                 ...+.+...
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~~  201 (292)
T 1kw3_B          139 GDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR-----------------HHTIALAAF  201 (292)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEECC
T ss_pred             CCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC-----------------cceEEEecC
Confidence            3468999999999999999999999999998653211  11 123345443211                 223444321


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCeEeecCCCCc--cceEEEEECCCCC-EEEEEec
Q 030857           87 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDY-WIEIFDL  160 (170)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~-~iel~~~  160 (170)
                        +.              ..+.+|++|.|+|+++   ++++|+ +|+++...|....  ..+++||+||||| .|||.+.
T Consensus       202 --~~--------------~~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~  264 (292)
T 1kw3_B          202 --PI--------------PKRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  264 (292)
T ss_dssp             --SC--------------SSSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             --CC--------------CCceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEEC
Confidence              10              1267899999998665   677999 9999876653221  1346899999999 9999986


Q ss_pred             Cc
Q 030857          161 KT  162 (170)
Q Consensus       161 ~~  162 (170)
                      ..
T Consensus       265 ~~  266 (292)
T 1kw3_B          265 PR  266 (292)
T ss_dssp             CC
T ss_pred             CE
Confidence            53

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.66  E-value=9.6e-16  Score=117.21  Aligned_cols=119  Identities=13%  Similarity=0.113  Sum_probs=80.3

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecC--Cc-ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      ...+++|+.|.|+|++++++|| ++|||++......+  .+ .....|+..+..                 ...+.+...
T Consensus       143 ~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~~  204 (305)
T 2wl9_A          143 EGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR-----------------HHSLAFGVG  204 (305)
T ss_dssp             TTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS-----------------SCSEEECCS
T ss_pred             CCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC-----------------ceEEEEecC
Confidence            3458999999999999999999 99999987542111  11 122334432211                 122333211


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCC-C-ccceEEEEECCCCCEEEEEecC
Q 030857           87 WGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG-G-KLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~-~-~~~~~~~~~DPdG~~iel~~~~  161 (170)
                        +              ...+++|++|.|+|   +++++++|+++|+++...|.. . ...+.+||+|||||.|||....
T Consensus       205 --~--------------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          205 --P--------------MDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             --C--------------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             --C--------------CCCCceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence              0              01267899999998   667888999999998866522 1 1234689999999999999865


Q ss_pred             c
Q 030857          162 T  162 (170)
Q Consensus       162 ~  162 (170)
                      .
T Consensus       269 ~  269 (305)
T 2wl9_A          269 R  269 (305)
T ss_dssp             C
T ss_pred             E
Confidence            3

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.66  E-value=2.2e-15  Score=117.84  Aligned_cols=135  Identities=17%  Similarity=0.235  Sum_probs=90.7

Q ss_pred             CCceeeeEEEEEeC--ChHHHHHHHHHhcCCEEeEeee--cCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEE
Q 030857            9 CNKRFPHFTMFRIK--DPKVSLDFYSRVLGMSLLKRLD--FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   84 (170)
Q Consensus         9 ~~~~~l~hv~i~v~--d~~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~   84 (170)
                      ....+++|++|.|+  |++++++||+++|||++.....  .+...+...++..++                 +...++|.
T Consensus       154 ~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~-----------------g~~~l~l~  216 (357)
T 2r5v_A          154 VDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS-----------------GAVTLTLI  216 (357)
T ss_dssp             CCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT-----------------SCCEEEEE
T ss_pred             CCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC-----------------CCEEEEEe
Confidence            34568999999999  9999999999999999986532  222233444554322                 13578886


Q ss_pred             eccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCC-------------Ccc-----ceEEE
Q 030857           85 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG-------------GKL-----KGVAF  146 (170)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~-------------~~~-----~~~~~  146 (170)
                      .............+... ....+++||||.|+|+++++++|+++|+++...|..             ..+     .+++|
T Consensus       217 ~~~~~~~~~~~~~~~~~-~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~  295 (357)
T 2r5v_A          217 EPDRNADPGQIDEFLKD-HQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLA  295 (357)
T ss_dssp             EECTTSBCCHHHHHHHH-HTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEE
T ss_pred             eecCCCCCchhHHHHHh-cCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEE
Confidence            64321100000000000 012388999999999999999999999998877621             011     13689


Q ss_pred             EECCCCCEEEEEecC
Q 030857          147 IKDPDDYWIEIFDLK  161 (170)
Q Consensus       147 ~~DPdG~~iel~~~~  161 (170)
                      ++||||++|||++..
T Consensus       296 ~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          296 DEDHGGQLFQIFTAS  310 (357)
T ss_dssp             EEETTEEEEEEEBCC
T ss_pred             ecCCCceEEEEEccC
Confidence            999999999999853

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.66  E-value=1.2e-15  Score=116.67  Aligned_cols=118  Identities=14%  Similarity=0.130  Sum_probs=80.1

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecC--Cc-ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      ..+++|++|.|+|++++++|| ++|||++......+  .+ .....|+..+..                 ...+.+..  
T Consensus       147 ~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~--  206 (302)
T 2ehz_A          147 DQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR-----------------DHSIAFGA--  206 (302)
T ss_dssp             GGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB-----------------SCSEEECS--
T ss_pred             CCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC-----------------CcEEEEec--
Confidence            358999999999999999999 99999987542211  11 123444443211                 12233321  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCeEeecCCCC-c-cceEEEEECCCCCEEEEEecCc
Q 030857           88 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDGG-K-LKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~~-~-~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      .+              .+.+.+|++|.|+|+++   ++++|+++|+++...|... . ..+++||+|||||.|||+....
T Consensus       207 ~~--------------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (302)
T 2ehz_A          207 MP--------------AAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRGA  272 (302)
T ss_dssp             CC--------------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCC
T ss_pred             CC--------------CCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECce
Confidence            11              01267899999998765   6779999999988665321 1 2347899999999999987653

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.66  E-value=3.6e-15  Score=117.11  Aligned_cols=114  Identities=20%  Similarity=0.224  Sum_probs=82.3

Q ss_pred             CCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857            9 CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus         9 ~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ....++.||.|.|+|++++++||+++|||++..+.   +.   .+++...+..               ....+.+...  
T Consensus        13 p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~---~~---~~~lr~~~~~---------------~~~~l~l~~~--   69 (365)
T 4ghg_A           13 PDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYED---EN---QIYLRSFEEF---------------IHHNLVLTKG--   69 (365)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC---SS---EEEEECTTCC---------------SSCSEEEEEC--
T ss_pred             CCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEc---CC---EEEEEeCCCC---------------cceEEEeccC--
Confidence            34579999999999999999999999999998763   21   2334332210               1233444321  


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCC-C-ccceEEEEECCCCCEEEEEec
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG-G-KLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~-~-~~~~~~~~~DPdG~~iel~~~  160 (170)
                      ..               .++.|++|.|.+   ++++.++|+++|+++...+.. . ..++.++|+|||||.|||+..
T Consensus        70 ~~---------------~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~  131 (365)
T 4ghg_A           70 PV---------------AALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFE  131 (365)
T ss_dssp             SS---------------CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             CC---------------CCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEE
Confidence            11               267899999974   888999999999998876532 2 224578999999999999853

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.66  E-value=1.1e-15  Score=116.08  Aligned_cols=111  Identities=17%  Similarity=0.293  Sum_probs=80.7

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++..+..  . .   .++..++.                 ...+.+..  ..  
T Consensus         3 ~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~-~---~~l~~~~~-----------------~~~l~~~~--~~--   55 (292)
T 1kw3_B            3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D-A---ALYRADQR-----------------AWRIAVQP--GE--   55 (292)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T-E---EEEESSSB-----------------SCSEEEEE--CT--
T ss_pred             eeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC--C-e---EEEEcCCc-----------------eEEEEEcc--CC--
Confidence            489999999999999999999999999987631  1 1   22333221                 11232321  11  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCC----CccceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                                   ..++.|++|.|+   |+++++++|+++|+++...+..    ...++.+||+|||||.|||++...
T Consensus        56 -------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           56 -------------LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             -------------TCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             -------------CCCccEEEEEECCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECcc
Confidence                         015689999998   8999999999999998776631    123457889999999999998653

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.65  E-value=1.7e-15  Score=113.34  Aligned_cols=111  Identities=14%  Similarity=0.184  Sum_probs=81.3

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++|+.|.|+|++++++||+++|||++..+..    .  .+++..+                   ...+.|...... 
T Consensus        24 ~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~--~~~L~~g-------------------~~~l~l~~~~~~-   77 (252)
T 3pkv_A           24 MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----D--AFTIQLG-------------------VSQIQFRAAADG-   77 (252)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----S--EEEEEET-------------------TEEEEEEECCTT-
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----C--EEEEEeC-------------------CEEEEEEECCCC-
Confidence            3589999999999999999999999999987632    1  2344432                   345666543111 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeec-CCC-----CccceEEEEECCCCCEEEEEecCc
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKK-PDG-----GKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~-~~~-----~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                                    ..+..|++|.|+  ++++++++|+++ +++... +..     ...++.+||+|||||.|||++...
T Consensus        78 --------------~~~~~hiaf~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           78 --------------TKPFYHIAINIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             --------------CCCCCEEEEEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             --------------CCCeeEEEEEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence                          014679999986  699999999999 988652 211     122457999999999999998754

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.64  E-value=4.1e-15  Score=115.36  Aligned_cols=119  Identities=9%  Similarity=0.031  Sum_probs=80.9

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++|++|.|+|++++++||+++|||++.....    .+ ..|......     .          ....+.+..  ...
T Consensus       178 ~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~-~~~~~~~~g-----~----------~~~~~~~~~--~~~  235 (338)
T 1zsw_A          178 IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QE-AIFQSIKGE-----A----------FGEIVVKYL--DGP  235 (338)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SE-EEEESSTTC-----S----------TTCEEEEEC--CSS
T ss_pred             CceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----Ce-EEEEecCCC-----C----------ceEEEEecc--CCC
Confidence            4689999999999999999999999999987632    22 222221000     0          012333321  110


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .      .   .....++.|++|.|+   |+++++++|+++|+++. .+....+.+.+||+|||||.|||++..
T Consensus       236 ~------~---~~~~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          236 T------E---KPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             B------C---BCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             C------C---CCCCCceEEEEEEeCCHHHHHHHHHHHHHCCCcee-eeeecCceEEEEEECCCCCEEEEEEcC
Confidence            0      0   011136789999998   69999999999999985 443333456799999999999999854

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.64  E-value=1.5e-15  Score=115.74  Aligned_cols=109  Identities=17%  Similarity=0.241  Sum_probs=79.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeE-eeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLK-RLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .+++|+.|.|+|++++++||+++|||++.. +.   +..   .++..++.                 ...+.+...  . 
T Consensus         4 ~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~---~~~~~~~~-----------------~~~l~l~~~--~-   57 (300)
T 2zyq_A            4 RSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EGA---LYLRMDDF-----------------PARLVVVPG--E-   57 (300)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SSC---EEEESSSS-----------------SCSEEEEEC--S-
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CCe---EEEEeCCC-----------------cEEEEEecC--C-
Confidence            489999999999999999999999999976 32   111   23332221                 223444321  1 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCC----CccceEEEEECCCCCEEEEEec
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~  160 (170)
                                    ..++.|++|.|++   +++++++|+++|+++...+..    ...++.+||+|||||.|||++.
T Consensus        58 --------------~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           58 --------------HDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             --------------SCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             --------------CCCcceEEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence                          0156899999975   899999999999998765532    1234578999999999999987

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.60  E-value=3.2e-15  Score=114.24  Aligned_cols=111  Identities=17%  Similarity=0.189  Sum_probs=79.8

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++|+.|.|+|++++++||+++|||++..+..  ..   ..++..+..                 +..+.+..  .. 
T Consensus         7 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~---~~~~~~~~~-----------------~~~l~l~~--~~-   61 (302)
T 2ehz_A            7 VIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KD---RFYLRMDYW-----------------HHRIVVHH--NG-   61 (302)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--SS---EEEEESSSB-----------------SCSEEEES--SC-
T ss_pred             ccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--Cc---ceEEEeCCC-----------------ceEEEEec--CC-
Confidence            3589999999999999999999999999976521  11   123332211                 22344421  11 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCC----ccceEEEEECCCCCEEEEEec
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iel~~~  160 (170)
                                    ..++.|++|.|+   |+++++++|+++|+++...+...    ..++.+||+|||||.|||++.
T Consensus        62 --------------~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           62 --------------QDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             --------------CSEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             --------------CCCeeEEEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence                          015689999995   69999999999999987765321    124578999999999999975

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.60  E-value=1.1e-14  Score=111.70  Aligned_cols=115  Identities=15%  Similarity=0.144  Sum_probs=83.4

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ...+++|+.|.|+|++++++||+++|||++....   + .  ..++..++..               ....+.+...  .
T Consensus         5 ~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~---~-~--~~~l~~~~~~---------------~~~~l~l~~~--~   61 (310)
T 3b59_A            5 RVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGED---A-N--NAWFKAQGAD---------------EHHVVQLRRA--D   61 (310)
T ss_dssp             CEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEC---S-S--EEEEECTTSC---------------CSCSEEEEEC--S
T ss_pred             ecceeeEEEEecCCHHHHHHHHHhCcCCEEeeec---C-C--eEEEEECCCC---------------CCEEEEEEEC--C
Confidence            3458999999999999999999999999998753   1 1  2333332200               0245555431  1


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCeEeecCCC---CccceEEEEECCCCCEEEEEecCc
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG---GKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~---~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                                     ..+..|++|.|   +|+++++++|+++|+++...+..   ...++.++|+||+||.|||++...
T Consensus        62 ---------------~~~~~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  125 (310)
T 3b59_A           62 ---------------ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVA  125 (310)
T ss_dssp             ---------------SCEEEEEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             ---------------CCCeeEEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEccc
Confidence                           01567999999   68999999999999998776532   223567889999999999998654

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.60  E-value=4.3e-15  Score=113.58  Aligned_cols=110  Identities=17%  Similarity=0.279  Sum_probs=80.4

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|+.|.|+|++++++||+++|||++....  .+ .  ..++..++.                 +..+.+...  .  
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~-~--~~~~~~~~~-----------------~~~l~l~~~--~--   58 (305)
T 2wl9_A            5 TELGYLGLSVSNLDAWRDYAAGIMGMQVVDDG--ED-D--RIYLRMDRW-----------------HHRIVLHAD--G--   58 (305)
T ss_dssp             CEEEEEEEECSCHHHHHHHHTTTTCCEEECCS--CT-T--EEEEECSSB-----------------SCSEEEECS--S--
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhccCCEEeecc--CC-C--eEEEEeCCC-----------------eEEEEEEEC--C--
Confidence            48999999999999999999999999997621  12 2  123333221                 234555321  1  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCC----CccceEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~  160 (170)
                                   ..+..|++|.|+   |+++++++|+++|+++...|..    ...++.+||+|||||.|||++.
T Consensus        59 -------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           59 -------------SDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             -------------CCEEEEEEEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             -------------CCCeEEEEEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence                         125689999997   6999999999999998876532    1224578999999999999986

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.58  E-value=2.6e-13  Score=93.60  Aligned_cols=116  Identities=14%  Similarity=0.081  Sum_probs=77.8

Q ss_pred             eEEEEEeC-ChHHHHHHHHHhcCCEEeEeeecCC------------cceEEEeeeccCCCCCCCCcccceeeecCCCcEE
Q 030857           15 HFTMFRIK-DPKVSLDFYSRVLGMSLLKRLDFPE------------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI   81 (170)
Q Consensus        15 ~hv~i~v~-d~~~s~~FY~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   81 (170)
                      .+..|.|. |+++|++||+++||+++.....+.+            ..+..+.+..+                   +..+
T Consensus         5 ~~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~-------------------~~~l   65 (149)
T 1u6l_A            5 IVPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG-------------------SFAL   65 (149)
T ss_dssp             EEEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET-------------------TEEE
T ss_pred             EEEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC-------------------CEEE
Confidence            34889999 9999999999999999986543322            11222222221                   2344


Q ss_pred             EEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEE
Q 030857           82 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEI  157 (170)
Q Consensus        82 el~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel  157 (170)
                      .+... .+..  .   ..    ...+ .+++|.|+|   +++++++|+ +|.++..++.+.+++ +.++|+||+|+.|+|
T Consensus        66 ~~~d~-~~~~--~---~~----~~~g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l  133 (149)
T 1u6l_A           66 MASDN-HPAY--P---YE----GIKG-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMV  133 (149)
T ss_dssp             EEEEC-CTTS--C---CC----CCCS-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEE
T ss_pred             EEEcC-CCcc--C---CC----CCCc-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEE
Confidence            44321 1100  0   00    0113 489999998   889999985 899998888766666 577899999999999


Q ss_pred             EecC
Q 030857          158 FDLK  161 (170)
Q Consensus       158 ~~~~  161 (170)
                      .+..
T Consensus       134 ~~~~  137 (149)
T 1u6l_A          134 NCEQ  137 (149)
T ss_dssp             EESC
T ss_pred             EEec
Confidence            9864

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.58  E-value=1.1e-13  Score=104.77  Aligned_cols=116  Identities=11%  Similarity=0.051  Sum_probs=79.2

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD   92 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~   92 (170)
                      ...++.+.|.|+++|++||+++||+++......+ ..+  ..+..++..               ....+.+...  +.. 
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~--~~~~~~~~~---------------~~~~~~~~~~--~~~-  241 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PEF--AEAALTPWS---------------AGPRFRLAAV--PGP-  241 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EEE--EEEESSSSS---------------SSSEEEEEEC--CCS-
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-ccE--EEEEcCCCc---------------cccccccccC--CCc-
Confidence            4568899999999999999999999998543322 122  233332200               0022222111  100 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC-CHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857           93 PDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        93 ~~~~~~~~~~~~~~g~~hl~f~v~-di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                             .+    ....+++|.|+ |+++++++++++|+++..+|...+++ +.++|+|||||.|+|.++
T Consensus       242 -------~~----~~~~~~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          242 -------GP----VEPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             -------SC----CCCCEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             -------CC----CCceEEEEEcCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence                   00    12358999999 99999999999999998777544444 678999999999999875

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.55  E-value=8.9e-13  Score=89.47  Aligned_cols=113  Identities=6%  Similarity=0.058  Sum_probs=77.0

Q ss_pred             EEEEeC--ChHHHHHHHHHhc-CCEEeEeeecCC------cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857           17 TMFRIK--DPKVSLDFYSRVL-GMSLLKRLDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus        17 v~i~v~--d~~~s~~FY~~~l-G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      +.|.|.  |+++|++||+++| |+++.......+      ..+....+..+                   +..+.+....
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~-------------------g~~~~~~~~~   69 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG-------------------DQSVHCIDSH   69 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEEC-------------------CEEEEEECCC
Confidence            678887  9999999999999 999976433221      22222223321                   2233333221


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857           88 GTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                      ..+.      ...     .....++|.|+|   ++++++++. +|.++..++.+.+++ +.++|+||+|+.|+|...
T Consensus        70 ~~~~------~~~-----~~~~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           70 VRHA------FDF-----TPAFSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             SCCS------CCC-----CTTEEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             CCCC------CCC-----CCceEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEec
Confidence            0010      100     122489999999   999999999 999999888776665 677899999999999875

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.53  E-value=7.9e-14  Score=110.06  Aligned_cols=135  Identities=15%  Similarity=0.203  Sum_probs=89.0

Q ss_pred             CCceeeeEEEEEeC--ChHHHHHHHHHhcCCEEeEeee-----cCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEE
Q 030857            9 CNKRFPHFTMFRIK--DPKVSLDFYSRVLGMSLLKRLD-----FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI   81 (170)
Q Consensus         9 ~~~~~l~hv~i~v~--d~~~s~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   81 (170)
                      ....+++|+++.|+  |++++++||+++|||++.....     .+...+...++..+.                 +...+
T Consensus       180 ~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~-----------------g~v~i  242 (381)
T 1t47_A          180 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT-----------------LKVKF  242 (381)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT-----------------SCSEE
T ss_pred             CCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCC-----------------CcEEE
Confidence            34468999999999  9999999999999999986532     122233334443221                 13467


Q ss_pred             EEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCcc------------------ce
Q 030857           82 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL------------------KG  143 (170)
Q Consensus        82 el~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~------------------~~  143 (170)
                      +|..............+.. .....|++||||.|+|+++++++|+++|+++...|..-+.                  ..
T Consensus       243 ~l~~~~~~~~~s~~~~~l~-~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~  321 (381)
T 1t47_A          243 PINEPALAKKKSQIDEYLE-FYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELK  321 (381)
T ss_dssp             EEEEECCSSSCCHHHHHHH-HHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHT
T ss_pred             EEecCCcCCCccHHHHHHH-HhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhC
Confidence            7766431111110000000 0012378999999999999999999999999877632110                  12


Q ss_pred             EEEEECCCCCEEEEEecC
Q 030857          144 VAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       144 ~~~~~DPdG~~iel~~~~  161 (170)
                      ++|-+||+|++++|+++.
T Consensus       322 il~d~d~~g~llqift~~  339 (381)
T 1t47_A          322 ILADRDEDGYLLQIFTKP  339 (381)
T ss_dssp             CEEEECSSCEEEEEEBCC
T ss_pred             eEEeeCCCCeEEEEeccC
Confidence            578889999999988764

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.52  E-value=3e-13  Score=106.71  Aligned_cols=127  Identities=18%  Similarity=0.148  Sum_probs=88.0

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecC--CcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ..+++||.|.|.|++++++||+++|||++..+....  ......++++.+                   ...++|.....
T Consensus        20 i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g-------------------~~~l~l~~~~~   80 (381)
T 1t47_A           20 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-------------------SARFVLTSVIK   80 (381)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEESS
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC-------------------CEEEEEecCCC
Confidence            368999999999999999999999999998863211  112233344322                   35677765322


Q ss_pred             CCCCCC---CCCC--CCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCC---Cccc-eEEEEECCCCCEEEEEe
Q 030857           89 TESDPD---FKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GKLK-GVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        89 ~~~~~~---~~~~--~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~---~~~~-~~~~~~DPdG~~iel~~  159 (170)
                      +... .   ...+  ..+    .++.|++|.|+|+++++++++++|+++..+|..   +... +.++++||+|+.++|++
T Consensus        81 ~~~~-~~~~~~~~~~~~g----~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~  155 (381)
T 1t47_A           81 PATP-WGHFLADHVAEHG----DGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVD  155 (381)
T ss_dssp             CCSH-HHHHHHHHHHHHC----SEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEE
T ss_pred             CCCc-chhHHHHHHHhcC----CceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEe
Confidence            2110 0   0000  011    278899999999999999999999999877642   2222 36778999999999998


Q ss_pred             cC
Q 030857          160 LK  161 (170)
Q Consensus       160 ~~  161 (170)
                      +.
T Consensus       156 ~~  157 (381)
T 1t47_A          156 RT  157 (381)
T ss_dssp             EE
T ss_pred             cC
Confidence            63

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.50  E-value=1e-12  Score=103.13  Aligned_cols=119  Identities=16%  Similarity=0.179  Sum_probs=82.2

Q ss_pred             CCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857            9 CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus         9 ~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ....+++|+.|.|.|++++.+||++ |||.+.......+......|+.....                 ...+.+...  
T Consensus       148 ~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~-----------------hH~la~~~~--  207 (365)
T 4ghg_A          148 GELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT-----------------VHDTALTGG--  207 (365)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS-----------------SCSEEEEES--
T ss_pred             ccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc-----------------ccceeeecC--
Confidence            3456899999999999999999965 99999877655555555666665332                 233444321  


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHH---HHHHHhcCCeE--eecCC-CCc-cceEEEEECCCCCEEEEEecC
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA---CERFERLGVEF--AKKPD-GGK-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~---~~~l~~~G~~~--~~~~~-~~~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                      +               ..+++|++|.|+|++++   +++|.++|+..  ...|. -+. ...++||+||+|++||+...+
T Consensus       208 ~---------------~~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g  272 (365)
T 4ghg_A          208 N---------------GPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQD  272 (365)
T ss_dssp             S---------------BSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             C---------------CCceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCC
Confidence            1               12789999999987664   57888888753  22331 111 124689999999999998755


Q ss_pred             c
Q 030857          162 T  162 (170)
Q Consensus       162 ~  162 (170)
                      .
T Consensus       273 ~  273 (365)
T 4ghg_A          273 Y  273 (365)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.48  E-value=1.4e-12  Score=101.86  Aligned_cols=125  Identities=15%  Similarity=0.101  Sum_probs=85.5

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++||.|.|.|++++++||+++|||++..+....++.  .+++..+                   ...+++.....+..
T Consensus         4 ~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g~--~~~~~~g-------------------~~~l~l~~~~~~~~   62 (357)
T 2r5v_A            4 FEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHR--SIALRQG-------------------QVTLVLTEPTSDRH   62 (357)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTEE--EEEEEET-------------------TEEEEEEEESSTTS
T ss_pred             ceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCce--EEEEEeC-------------------CEEEEEeCCCCCCC
Confidence            48999999999999999999999999998775433222  2223321                   34566654222211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCC-Ccc-ceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG-GKL-KGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~-~~~-~~~~~~~DPdG~~iel~~~~  161 (170)
                      .........+    .++.|++|.|+|+++++++++++|+++...|.. ... ....+++||+|..++|+++.
T Consensus        63 ~~~~~~~~~g----~g~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           63 PAAAYLQTHG----DGVADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             HHHHHHHHHS----SEEEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             HHHHHHHhcC----CeEEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            0000000011    278899999999999999999999999876632 111 23678899999999999864

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.47  E-value=8.9e-13  Score=105.35  Aligned_cols=131  Identities=19%  Similarity=0.171  Sum_probs=86.8

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecC--CcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      .+++||.|.|.|+++|++||++.|||++..+...+  ...+..++++.+                   ...++|.....+
T Consensus        24 ~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g-------------------~~~l~L~~~~~~   84 (424)
T 1sqd_A           24 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG-------------------DLRFLFTAPYSP   84 (424)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET-------------------TEEEEEEEECCG
T ss_pred             CeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC-------------------CEEEEEecCCCC
Confidence            58999999999999999999999999998774322  122334444432                   356777654222


Q ss_pred             CC---------CCCCCCCCCC------CCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCC-ccceEEEEECCCCC
Q 030857           90 ES---------DPDFKGYHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDY  153 (170)
Q Consensus        90 ~~---------~~~~~~~~~~------~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~  153 (170)
                      ..         ......++.+      .....++.|++|.|+|+++++++++++|+++..+|... .......+++|+|+
T Consensus        85 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~  164 (424)
T 1sqd_A           85 SLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDV  164 (424)
T ss_dssp             GGTTTCCGGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTE
T ss_pred             cccccccccccccccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCc
Confidence            10         0000000000      00013789999999999999999999999998776432 11235667888888


Q ss_pred             EEEEEecC
Q 030857          154 WIEIFDLK  161 (170)
Q Consensus       154 ~iel~~~~  161 (170)
                      .++|+++.
T Consensus       165 ~~~lvd~~  172 (424)
T 1sqd_A          165 VLRYVSYK  172 (424)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEecC
Confidence            88888764

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.42  E-value=1.7e-12  Score=101.56  Aligned_cols=132  Identities=13%  Similarity=0.228  Sum_probs=85.3

Q ss_pred             CceeeeEEEEEeC--ChHHHHHHHHHhcCCEEeEeeecCC--cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEe
Q 030857           10 NKRFPHFTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH   85 (170)
Q Consensus        10 ~~~~l~hv~i~v~--d~~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~   85 (170)
                      ...+++|+++.|+  |++++++||+++|||++........  ..+....+..                 ..+...++|..
T Consensus       155 ~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~-----------------~~g~~~i~L~~  217 (357)
T 1cjx_A          155 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSA-----------------PDGMIRIPLNE  217 (357)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEEC-----------------TTSSCEEEEEE
T ss_pred             CeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEEC-----------------CCCCEEEEEee
Confidence            3367999999999  9999999999999999987643221  1111111111                 11245788876


Q ss_pred             c-cCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEee-cCC---------CCcc---------ceEE
Q 030857           86 N-WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK-KPD---------GGKL---------KGVA  145 (170)
Q Consensus        86 ~-~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~-~~~---------~~~~---------~~~~  145 (170)
                      . .....  ....+.. .....|++|+||.|+|+++++++|+++|+++.. .|.         .+..         ..++
T Consensus       218 ~~~~~~~--~~~~~~~-~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il  294 (357)
T 1cjx_A          218 ESSKGAG--QIEEFLM-QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGIL  294 (357)
T ss_dssp             ECTTCCS--HHHHHHH-HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCE
T ss_pred             ecCCCCC--hHHHhHH-hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeE
Confidence            5 22111  0000000 001237899999999999999999999999887 551         1111         1247


Q ss_pred             EEEC----CCCCEEEEEecC
Q 030857          146 FIKD----PDDYWIEIFDLK  161 (170)
Q Consensus       146 ~~~D----PdG~~iel~~~~  161 (170)
                      |.+|    |+|++++|+++.
T Consensus       295 ~d~d~~~~~~g~llqift~~  314 (357)
T 1cjx_A          295 LDGSSVEGDKRLLLQIFSET  314 (357)
T ss_dssp             EEEEEETTEEEEEEEEEBCC
T ss_pred             EecCCCCCCCCeEEEEeccC
Confidence            7788    889999988764

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.42  E-value=2e-12  Score=103.11  Aligned_cols=108  Identities=11%  Similarity=0.217  Sum_probs=72.3

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCc-----ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEe
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-----KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH   85 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~   85 (170)
                      -.+++|+++.|.|++++++||+++|||++.......+.     ++...++..+.                 +...++|..
T Consensus       197 ~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~-----------------g~i~l~l~e  259 (418)
T 1sp8_A          197 LSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS-----------------ENVLLPLNE  259 (418)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS-----------------SCCEEEEEE
T ss_pred             cceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCC-----------------CcEEEEEee
Confidence            46899999999999999999999999999887543221     23334443322                 245777776


Q ss_pred             ccCC-CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHh----cCCeEeecC
Q 030857           86 NWGT-ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFER----LGVEFAKKP  136 (170)
Q Consensus        86 ~~~~-~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~----~G~~~~~~~  136 (170)
                      .... ........+... ....|++||||.|+|+++++++|++    +|+++...|
T Consensus       260 ~~~~~~~~s~i~~fl~~-~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          260 PVHGTKRRSQIQTFLDH-HGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             ECCCSSSCCHHHHHHHH-HTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             cccccCCCcchhhhhhc-cCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            5321 111100001000 0123899999999999999999999    899998765

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.42  E-value=1.4e-12  Score=104.16  Aligned_cols=108  Identities=12%  Similarity=0.267  Sum_probs=72.1

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC-----cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEe
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH   85 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~   85 (170)
                      -.+++|+++.|.|++++++||+++|||++..+...++     .++...++..+.                 +...++|..
T Consensus       200 ~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~-----------------g~~~l~l~e  262 (424)
T 1sqd_A          200 IRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND-----------------EMVLLPINE  262 (424)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT-----------------SCSEEEEEE
T ss_pred             cceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCC-----------------CcEEEEEec
Confidence            3689999999999999999999999999988753322     133333443221                 246788876


Q ss_pred             ccCC-CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHh----cCCeEeecC
Q 030857           86 NWGT-ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFER----LGVEFAKKP  136 (170)
Q Consensus        86 ~~~~-~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~----~G~~~~~~~  136 (170)
                      .... ........+... ....|++||||.|+|+++++++|++    +|+++...|
T Consensus       263 ~~~~~~~~s~i~~fl~~-~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          263 PVHGTKRKSQIQTYLEH-NEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             ECCC---CCHHHHHHHH-HTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             ccccCCCcchhhhhhhh-cCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            5311 111111111100 0113899999999999999999999    899998765

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.37  E-value=6.8e-12  Score=100.08  Aligned_cols=132  Identities=14%  Similarity=0.078  Sum_probs=86.9

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC--cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ..+++||.|.|.|++++++||++.|||++..+...+.  .....++++.+                   ...++|.....
T Consensus        29 i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G-------------------~~~l~L~~~~~   89 (418)
T 1sp8_A           29 TLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG-------------------SLSFLFTAPYA   89 (418)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEECC
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC-------------------CEEEEEecCCC
Confidence            3689999999999999999999999999987743221  23444555432                   35677765422


Q ss_pred             CCC---CCCCCCCCCC------CCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCC-ccceEEEEECCCCCEEEEE
Q 030857           89 TES---DPDFKGYHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIF  158 (170)
Q Consensus        89 ~~~---~~~~~~~~~~------~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iel~  158 (170)
                      +..   ..+...+..+      .....++.|++|.|+|+++++++++++|+++...|... ...+..++++|+|..++|+
T Consensus        90 ~~~~~~~~p~~~~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lv  169 (418)
T 1sp8_A           90 HGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYV  169 (418)
T ss_dssp             SSCCGGGCSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred             CcccccccccccccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEE
Confidence            210   0000000000      00013789999999999999999999999998876321 1122456678888888888


Q ss_pred             ecC
Q 030857          159 DLK  161 (170)
Q Consensus       159 ~~~  161 (170)
                      ++.
T Consensus       170 d~~  172 (418)
T 1sp8_A          170 SYP  172 (418)
T ss_dssp             ECC
T ss_pred             ccC
Confidence            765

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.36  E-value=2.1e-11  Score=96.36  Aligned_cols=128  Identities=13%  Similarity=0.129  Sum_probs=88.9

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCc--ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      .-++++||+|.|.|++++++||++.|||++........+  ....+++..                   +...++|..+.
T Consensus         8 ~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~-------------------G~i~~~L~~p~   68 (393)
T 3isq_A            8 RFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQ-------------------GKIVFVLSSAL   68 (393)
T ss_dssp             EEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEE-------------------TTEEEEEEEES
T ss_pred             CCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEec-------------------CCEEEEEecCC
Confidence            446899999999999999999999999999986432211  112333332                   24577776543


Q ss_pred             CCCCCCCCCCC--CCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCC---cc-ceEEEEECCCCCEEEEEecC
Q 030857           88 GTESDPDFKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG---KL-KGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        88 ~~~~~~~~~~~--~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~---~~-~~~~~~~DPdG~~iel~~~~  161 (170)
                      .+... ....+  ..|    .+.+|++|+|+|+++++++++++|++++.+|...   .. .....+++|.|..+.|+++.
T Consensus        69 ~p~s~-~~a~fl~~hG----~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~  143 (393)
T 3isq_A           69 NPWNK-EMGDHLVKHG----DGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKM  143 (393)
T ss_dssp             STTCH-HHHHHHHHHC----SEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCCch-HHHHHHHhcC----CcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccc
Confidence            22110 00000  012    2789999999999999999999999999887432   11 23566899999999999863

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.34  E-value=1e-10  Score=82.38  Aligned_cols=116  Identities=15%  Similarity=0.116  Sum_probs=80.3

Q ss_pred             eeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC--------------cceEEEeeeccCCCCCCCCcccceeeecCCCc
Q 030857           14 PHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPA   79 (170)
Q Consensus        14 l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (170)
                      -....|.++|.++|++||+++||+++.....+.+              +.+..+-+..+                   +.
T Consensus        26 ~i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~-------------------g~   86 (172)
T 3l20_A           26 ALFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL-------------------GV   86 (172)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET-------------------TE
T ss_pred             cEEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC-------------------CE
Confidence            3567788889999999999999999876654421              22334444432                   34


Q ss_pred             EEEEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEe--------CCHHHHHHHHHhcC-CeEeecCCCCccc-eEEEEEC
Q 030857           80 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--------DDVYKACERFERLG-VEFAKKPDGGKLK-GVAFIKD  149 (170)
Q Consensus        80 ~lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v--------~di~~~~~~l~~~G-~~~~~~~~~~~~~-~~~~~~D  149 (170)
                      .|.+....+..       +..+     .-..+++.+        +|+++++++|.+.| +++..++.+.+++ +..+|+|
T Consensus        87 ~lm~~D~~g~~-------~~~~-----~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~D  154 (172)
T 3l20_A           87 KVLCSDSFGRA-------DKIN-----NGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTD  154 (172)
T ss_dssp             EEEEEECTTCC-------CCCC-----SSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEEC
T ss_pred             EEEEECCCCCC-------CCCC-----CcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEEC
Confidence            56665422111       1111     123567777        58999999999999 7999888666665 5778999


Q ss_pred             CCCCEEEEEec
Q 030857          150 PDDYWIEIFDL  160 (170)
Q Consensus       150 PdG~~iel~~~  160 (170)
                      |+|+.|+|...
T Consensus       155 pfG~~W~i~~~  165 (172)
T 3l20_A          155 KYGVRWMLHGQ  165 (172)
T ss_dssp             TTSCEEEEEEE
T ss_pred             CCCCEEEEEeC
Confidence            99999999765

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.33  E-value=4.8e-12  Score=100.00  Aligned_cols=132  Identities=14%  Similarity=0.216  Sum_probs=86.0

Q ss_pred             ceeeeEEEEEeCC--hHHHHHHHHHhcCCEEeEeee-----cCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEE
Q 030857           11 KRFPHFTMFRIKD--PKVSLDFYSRVLGMSLLKRLD-----FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL   83 (170)
Q Consensus        11 ~~~l~hv~i~v~d--~~~s~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel   83 (170)
                      -.+++|+++.|.|  ++++++||+++|||+......     .+...+...++..++                 +...++|
T Consensus       171 l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~-----------------g~v~i~L  233 (393)
T 3isq_A          171 LEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE-----------------ESIKMPI  233 (393)
T ss_dssp             EEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT-----------------SSCEEEE
T ss_pred             eeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC-----------------CCEEEEE
Confidence            3579999999998  999999999999999987643     112233334443322                 2568888


Q ss_pred             EeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCC-----------------Ccc-----
Q 030857           84 THNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG-----------------GKL-----  141 (170)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~-----------------~~~-----  141 (170)
                      ..+.....++....+... ....|++||||.|+||++++++|+++|+++...|..                 ...     
T Consensus       234 ~ep~~~~~~s~I~~fL~~-~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~~YY~~l~~r~~~~~~~~~e~~~~l~~  312 (393)
T 3isq_A          234 NEPAPGKKKSQIQEYVDY-NGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPSTYYKQLREKLKTAKIKVKENIDALEE  312 (393)
T ss_dssp             EEEECCSBCCHHHHHHHH-HTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCHHHHHHHHHHHTTCSSCCCSCHHHHHH
T ss_pred             ecCCCCCCCCHHHHHHHH-cCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCCccHHHHHHHHhccccccccccHHHHHh
Confidence            876431111111001000 012389999999999999999999999999886610                 000     


Q ss_pred             ceEEEEECCCCCEEEEEec
Q 030857          142 KGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus       142 ~~~~~~~DPdG~~iel~~~  160 (170)
                      .++++-+|.+|.++.|+.+
T Consensus       313 ~~IL~D~d~~g~llQifT~  331 (393)
T 3isq_A          313 LKILVDYDEKGYLLQIFTK  331 (393)
T ss_dssp             HTCEEEECSSCEEEEEEBC
T ss_pred             cCcEEccCCCceEEEEEee
Confidence            1256666777777766655

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.32  E-value=7.3e-11  Score=80.47  Aligned_cols=114  Identities=6%  Similarity=-0.007  Sum_probs=73.7

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhc-CCEEeEeeecCC------cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEe
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVL-GMSLLKRLDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH   85 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~l-G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~   85 (170)
                      ++...-+.+.|.++|++||+++| |+++.....+.+      ..+..+-+..+                   +..+.+..
T Consensus         5 ~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~-------------------~~~~m~~d   65 (139)
T 1tsj_A            5 KITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN-------------------GQVFMAID   65 (139)
T ss_dssp             SEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET-------------------TEEEEEEC
T ss_pred             ceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEEC-------------------CEEEEEEC
Confidence            34434343459999999999999 999986533322      22333333322                   22333321


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEecC
Q 030857           86 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  161 (170)
                      . .+.       .  +   . . ..|++.|+|   +++++++|. +|.++..++.+.+++ +..+|+||+|+.|+|....
T Consensus        66 ~-~~~-------~--~---~-~-~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~~  129 (139)
T 1tsj_A           66 A-NSG-------T--E---L-P-ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALPE  129 (139)
T ss_dssp             ---------------------C-CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEECC
T ss_pred             C-CCC-------C--C---c-e-EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeecc
Confidence            1 110       0  0   0 2 478899987   888899998 799999888766665 5789999999999998754

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.32  E-value=1.3e-10  Score=79.15  Aligned_cols=117  Identities=5%  Similarity=0.042  Sum_probs=78.2

Q ss_pred             eeeEEEEEeC-ChHHHHHHHHHhcC-CEEeEeeecC------CcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEE
Q 030857           13 FPHFTMFRIK-DPKVSLDFYSRVLG-MSLLKRLDFP------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   84 (170)
Q Consensus        13 ~l~hv~i~v~-d~~~s~~FY~~~lG-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~   84 (170)
                      .-....|.++ |.+++++||+++|| .++.....+.      ++.+..+.+..+                   +..+.+.
T Consensus         9 ~~i~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~-------------------g~~lm~~   69 (138)
T 3oms_A            9 QKITTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN-------------------GQEFMCI   69 (138)
T ss_dssp             CCCCEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEEE
T ss_pred             ccEEEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC-------------------CEEEEEE
Confidence            3345678888 89999999999999 5665443332      233444444432                   3455554


Q ss_pred             eccCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857           85 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                      .......      +..+     .-..+++.|+|   +++++++|. +|.++..++.+.+++ +..+++||+|+.|.|.-.
T Consensus        70 d~~~~~~------~~~~-----~~~~l~l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           70 DSYVNHN------FTFT-----PAMSLYVTCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             ECSSCCS------CCCC-----TTSCEEEEESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             cCCCCCC------CCCC-----CCEEEEEEcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEeC
Confidence            3221110      1111     12479999999   999999995 688998888766665 577899999999998643

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.21  E-value=1.5e-10  Score=90.49  Aligned_cols=120  Identities=15%  Similarity=0.081  Sum_probs=79.9

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++||.+.|.|++++.+|| +.|||++..+...  ..  .+++..+                   ...+.+..  .+.
T Consensus        10 i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~--~~--~~l~~~g-------------------~~~l~l~~--~~~   63 (357)
T 1cjx_A           10 LMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRS--KN--VHLYRQG-------------------EINLILNN--EPN   63 (357)
T ss_dssp             EEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESS--SS--EEEEEET-------------------TEEEEEEC--CSS
T ss_pred             cceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCC--ee--EEEEecC-------------------CEEEEEEC--CCC
Confidence            468999999999999999999 8999999876431  12  2222221                   23444432  111


Q ss_pred             CCCCCCC-CCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857           91 SDPDFKG-YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        91 ~~~~~~~-~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      . ..... ...+    .++.|++|+|+|+++++++++++|+++...+..........+++|+|..++|+++.
T Consensus        64 ~-~~~~~~~~~g----~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           64 S-IASYFAAEHG----PSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             S-HHHHHHHHHS----SEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             c-hhhhhhhhcC----CeEEEEEEEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCC
Confidence            0 00000 0111    37899999999999999999999999877663211112356788999999988764

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.16  E-value=1.1e-09  Score=80.38  Aligned_cols=120  Identities=17%  Similarity=0.172  Sum_probs=76.3

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ..+.+.++.|.|+|.+++++||+++|||++..+..      ..+.++....                 ...+.|-..+..
T Consensus         7 ~~~~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~-----------------~~~L~lEEsp~~   63 (244)
T 3e0r_A            7 NQIVRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG-----------------LEKLVLEEAPSM   63 (244)
T ss_dssp             CCEEEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC-----------------CEEEEEEECCTT
T ss_pred             cceEEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC-----------------cceEEEEeCCCc
Confidence            45667889999999999999999999999988732      2444443211                 234444332211


Q ss_pred             CCCCCCCCCCCCCCCCCCceEE---EEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCcccc
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHI---GITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK  165 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl---~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  165 (170)
                      ..           ....|.-|+   ++.|++-+++.+-|.. +.++... ..+..++.+|+.|||||.|||....+...
T Consensus        64 ~~-----------~~~~Glkh~a~i~i~vp~~~el~~lL~~-~~~~~~~-~~gdhgyA~yl~dPEGn~ieiyae~d~~~  129 (244)
T 3e0r_A           64 RT-----------RKVEGRKKLARLIVKVENPLEIEGILSK-TDSIHRL-YKGQNGYAFEIFSPEDDLILIHAEDDIAS  129 (244)
T ss_dssp             TC-----------BCCCSSCSEEEEEEEESSHHHHHHHHTT-CSCCSEE-EECSSSEEEEEECTTCCEEEEECCSCGGG
T ss_pred             cc-----------ccccccceeeeEEEEcCCHHHHHHHHhc-ccccccc-cccCCcEEEEEECCCCCeEEEEEcCCHHH
Confidence            11           011255666   5999986666555444 5443221 12334557999999999999997665443

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.45  E-value=1.3e-05  Score=55.68  Aligned_cols=104  Identities=12%  Similarity=0.054  Sum_probs=69.2

Q ss_pred             EEEEEeC-ChHHHHHHHHHhc-CCEEeEeeecC-------CcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           16 FTMFRIK-DPKVSLDFYSRVL-GMSLLKRLDFP-------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        16 hv~i~v~-d~~~s~~FY~~~l-G~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      ...|.++ |.+++++||+++| |.++.....++       ++.+.++-+..+                   +..+.+...
T Consensus         8 ~PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~-------------------g~~~m~~d~   68 (163)
T 1u69_A            8 TICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM-------------------GIPCLGLNG   68 (163)
T ss_dssp             EEEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET-------------------TEEEEEEEC
T ss_pred             eEEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC-------------------CEEEEEECC
Confidence            4567777 9999999999999 99887543332       233444545442                   234555432


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           87 WGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                       .+ .      +...    .+ ..+++.|+|   ++.++++|.+.|.++.      .+   ..++||.|+.|.|..+
T Consensus        69 -~p-~------~~~~----~~-~sl~v~~~d~~e~d~~~~~L~~~Gg~v~------~~---G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           69 -GP-A------FRHS----EA-FSFQVATDDQAETDRLWNAIVDNGGEES------AC---GWCRDKWGISWQITPR  123 (163)
T ss_dssp             -CT-T------CCCC----TT-EEEEEEESSHHHHHHHHHHHHHTTCEEC------ST---TEEECTTSCEEEEEEH
T ss_pred             -CC-C------cCCC----Cc-eEEEEEeCCHHHHHHHHHHHHhCCCEEE------EE---EEEECCCCCEEEEEeE
Confidence             11 1      1111    12 378889987   7888999988888776      22   3579999999999865

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.12  E-value=7.9e-06  Score=70.26  Aligned_cols=51  Identities=16%  Similarity=0.193  Sum_probs=42.9

Q ss_pred             eEEEEEeCCHHHHHHHHHhcCCeEeecCCC-CccceEEEEECCCCCEEEEEecC
Q 030857          109 GHIGITVDDVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       109 ~hl~f~v~di~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .|++|.+.|++++.++|.+.+.++...|.+ ++  ..+|+.||+||+|+|.+..
T Consensus        96 ~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~--~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           96 SNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISP--FEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             CEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSC--EEECCSSCCEEEECC-CCS
T ss_pred             ceEEEEeCCHHHHHHHHHhcCCccccCCCcCCC--ceEEeECCCCCEEEEeccC
Confidence            499999999999999999999988777743 22  3689999999999999865

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=97.99  E-value=5.6e-05  Score=56.83  Aligned_cols=107  Identities=15%  Similarity=0.095  Sum_probs=61.3

Q ss_pred             CCCCCCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcce--EEEeeeccCCCCCCCCcccceeeecCCCcE
Q 030857            3 LPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF--SLYFLGYEDTASAPADPVDRTVWTFGKPAT   80 (170)
Q Consensus         3 ~~~~~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (170)
                      +-|....+.++++|+.+.|+++++.- |-.+  +|++......+..+.  .+.++  +                   +..
T Consensus        14 ~~~~~~~M~~~lDHlVi~v~~l~~lG-~~~~--~f~~~~GG~H~~~GT~N~Li~f--d-------------------g~Y   69 (274)
T 3p8a_A           14 LVPRGSHMILKFDHIIHYIDQLDRFS-FPGD--VIKLHSGGYHHKYGTFNKLGYI--N-------------------ENY   69 (274)
T ss_dssp             -------CCCEEEEEEEECTTGGGCC-CGGG--SSCCEEEEEETTTTEEEEEEEC--S-------------------SSE
T ss_pred             cccCCcCccccCCEEEEEeccHHHcC-Cccc--eEEeCCCccCCCCCCEEEEEee--C-------------------CEE
Confidence            44566667889999999999884331 1111  177665433232222  23333  1                   579


Q ss_pred             EEEEeccCCCC--------CCCCCCCCC---CCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEee
Q 030857           81 IELTHNWGTES--------DPDFKGYHN---GNSEPRGFGHIGITVDDVYKACERFERLGVEFAK  134 (170)
Q Consensus        81 lel~~~~~~~~--------~~~~~~~~~---~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~  134 (170)
                      |||+...+.+.        .+.+. +..   ......|+.+++++++|+++..+++.++|+.+..
T Consensus        70 LElIai~~~~~~~~~~~~~~~~~~-f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A           70 IELLDVENNEKLKKMAKTIEGGVA-FATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             EEEEEESCHHHHHHHTTSTGGGTC-TTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             EEEEeecCcccccccccccCccch-HHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence            99998644321        01000 100   0112348999999999999999999999987653

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=96.68  E-value=0.0054  Score=44.98  Aligned_cols=47  Identities=15%  Similarity=0.162  Sum_probs=34.9

Q ss_pred             CceEEEEEeC--CHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEe
Q 030857          107 GFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus       107 g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  159 (170)
                      ++..+.|.|+  |+.++.++|++.|.-+...      ...+.+.||.|+.|-+.+
T Consensus       195 gLe~l~~~v~~~dl~~l~~~L~~~g~~idkk------~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          195 DLSMLKFLVNELDIASLRQKFESTEYFIPKS------EKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             SEEEEEEEESSCCHHHHHHHTTTSCEECCTT------CCEEEEECTTSCEEEEEE
T ss_pred             CceEEEEEeCHHHHHHHHHHHHhCCceEccc------CCEEEEECCCCCEEEEEE
Confidence            6677888886  6889999999988732222      234778999999988764

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=96.48  E-value=0.062  Score=39.58  Aligned_cols=119  Identities=19%  Similarity=0.194  Sum_probs=69.6

Q ss_pred             eeeEEEEEeCC--hHHHHHHHHHhcCCEEeEe-ee----cCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEe
Q 030857           13 FPHFTMFRIKD--PKVSLDFYSRVLGMSLLKR-LD----FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH   85 (170)
Q Consensus        13 ~l~hv~i~v~d--~~~s~~FY~~~lG~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~   85 (170)
                      .+.|+++.|.+  +++..+..++.  ..+... ..    ........+++..++                  +..+|++.
T Consensus        80 ~~~hiaf~V~~~dld~~~~rL~~~--v~~~~~~~~~~~~~~~~g~~~~~f~DPd------------------Gn~iEl~~  139 (252)
T 3pkv_A           80 PFYHIAINIAANHFQEGKAWLSGF--GELLTENDEDQAYFPFFNAYSCYVEDPS------------------GNIIELIS  139 (252)
T ss_dssp             CCCEEEEEECTTCHHHHHHHHTTS--SCCCCBTTBSCEEETTTTEEEEEEECTT------------------CCEEEEEE
T ss_pred             CeeEEEEEecHHHHHHHHHHHHhc--ceEeccCCccccccccCCeEEEEEECCC------------------CCEEEEEE
Confidence            57899999864  55555555443  332220 00    011122344444433                  56899987


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEE
Q 030857           86 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  157 (170)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel  157 (170)
                      .....+ ....++.  ...+.++.|+.+.|+|++++.+.+...|++.......  ..++.+.-| +|..|.+
T Consensus       140 ~~~~~~-~~~~~~~--~~~i~glghV~L~v~d~~~~~~fl~~LG~~~~~~~~~--~~~f~~~G~-~g~~i~v  205 (252)
T 3pkv_A          140 RQQAAP-VLDKPFS--ADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIE--PAGLNFIGD-QDLFLLL  205 (252)
T ss_dssp             ESSSSC-CCCSCCC--GGGCCEEEEEEEECSCHHHHHHHHHHTTCCCCGGGCC--TTSCEEEEE-TTEEEEE
T ss_pred             eCCCCc-cccCCCC--HHHCcEeeeEEEEeCCHHHHHHHHHHcCCCcccCCCC--hheEEEcCC-CcEEEEE
Confidence            543221 1111121  1346789999999999999999997789987765322  122355567 7777776

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=94.90  E-value=0.15  Score=33.50  Aligned_cols=58  Identities=21%  Similarity=0.257  Sum_probs=43.3

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC-C------ccceEEEEECCCCCEEEEEecCc
Q 030857          105 PRGFGHIGITVDDVYKACERFER-LGVEFAKKPDG-G------KLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus       105 ~~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~-~------~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      ..++.|+++.|.|++++.+...+ .|.++...... .      ..+...++.-.+|..|+|++...
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   82 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE   82 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTT
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCC
Confidence            34789999999999999999998 69988763211 0      12334677777889999998654

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=94.73  E-value=0.16  Score=32.52  Aligned_cols=55  Identities=22%  Similarity=0.330  Sum_probs=39.2

Q ss_pred             CCceEEEEEeCCHHHHHHHHHhcCCeEeecCC--CCccceEEEEECCCCCEEEEEecC
Q 030857          106 RGFGHIGITVDDVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~--~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ..+.|+++.|+|++++.+.....|.++.....  .....+..++.. ++..|+|++..
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   62 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPD   62 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEES
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecC
Confidence            37899999999999999999978998765421  112223445544 67889998864

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=94.28  E-value=0.11  Score=33.09  Aligned_cols=54  Identities=20%  Similarity=0.303  Sum_probs=38.0

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCc-cceEEEEECCCCCEEEEEecC
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ++.|+++.|.|++++.+...+ .|.++........ ....+++. .++..++|++..
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~   60 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVN-LGNTKMELLHPL   60 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEE-CSSSEEEEEEEC
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEe-cCCEEEEEEecC
Confidence            578999999999999999998 7998764321111 12234544 467888988753

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=93.66  E-value=0.24  Score=32.36  Aligned_cols=54  Identities=20%  Similarity=0.412  Sum_probs=39.3

Q ss_pred             CceEEEEEeCCHHHHHHHHHhcCCeEeecCC-C-----------CccceEEEEECCCC-CEEEEEec
Q 030857          107 GFGHIGITVDDVYKACERFERLGVEFAKKPD-G-----------GKLKGVAFIKDPDD-YWIEIFDL  160 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~-~-----------~~~~~~~~~~DPdG-~~iel~~~  160 (170)
                      .+.|+++.|.|++++.+..++.|.++..... .           .......+++-++| ..|+|++.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            6789999999999999999889998874321 0           11223566776666 78999874

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=93.63  E-value=0.15  Score=34.31  Aligned_cols=55  Identities=20%  Similarity=0.271  Sum_probs=39.0

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC-CccceEEEEECCCCCEEEEEecC
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .++.|+++.|.|++++.+...+ .|.++...... ......+++.. ++..|+|++..
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~l~l~~~~   63 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEI-GESKIELLEPL   63 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEE-TTEEEEEEEES
T ss_pred             CcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeC-CCeEEEEEeEC
Confidence            3789999999999999999998 79988654211 11123445543 56788988764

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=93.13  E-value=0.23  Score=31.44  Aligned_cols=53  Identities=25%  Similarity=0.318  Sum_probs=37.3

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCC-CCccceEEEEECCCCCEEEEEe
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~-~~~~~~~~~~~DPdG~~iel~~  159 (170)
                      .++.|+++.|+|++++.+...+ .|.++..... .......+++.. ++..++|++
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~   58 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKC-GDIELEIFG   58 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEE-TTEEEEEEE
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEec-CCeEEEEEe
Confidence            3678999999999999999976 7998875432 111122355554 455888888

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=93.11  E-value=1.6  Score=38.12  Aligned_cols=50  Identities=14%  Similarity=0.067  Sum_probs=36.6

Q ss_pred             eEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857          109 GHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       109 ~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ..+.|.+.|+.++.+.|.+..+  ...|... ....+|..||=||.|.+....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~dp~~~~~~~~~~~  174 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGA--EIIPSKI-DLVEFSTRDPMGDVISFSSYP  174 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSC--CBCCCC---CCCEEEESSSEEEEECCSSS
T ss_pred             ceEEEEeCcHHHHHHHhhhccc--ccCCCCC-CceeEEEecCCCCEEeeecCC
Confidence            5899999999999999998732  2233221 122589999999999987654

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=92.84  E-value=0.25  Score=32.90  Aligned_cols=56  Identities=21%  Similarity=0.262  Sum_probs=38.4

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC---------------CccceEEEEECCCCCEEEEEecC
Q 030857          105 PRGFGHIGITVDDVYKACERFER-LGVEFAKKPDG---------------GKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       105 ~~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~---------------~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ..++.|+++.|.|++++.+...+ .|.++......               ....+.+++. -.+..|||++..
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~g~~~leL~~~~   88 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFE-LGPLQLELIEPD   88 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEE-ETTEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEe-cCCEEEEEEEEC
Confidence            45789999999999999999987 79876532100               0112234443 357889999864

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=92.82  E-value=0.72  Score=28.44  Aligned_cols=51  Identities=27%  Similarity=0.494  Sum_probs=38.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ++.|+.+.|.|+++..+...+ .|.++..... .   ...++..++|..+++.+..
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~---~~~~~~~~~~~~l~l~~~~   54 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-N---AFAVMRDNDGFILTLMKGK   54 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-T---TEEEEECTTCCEEEEEECS
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC-C---cEEEEEcCCCcEEEEEeCC
Confidence            568999999999999999987 7998875431 1   2356666678888888754

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=92.72  E-value=0.39  Score=31.16  Aligned_cols=56  Identities=7%  Similarity=0.093  Sum_probs=40.1

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCC-CCccceEEEEECCCC-----CEEEEEecC
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPDD-----YWIEIFDLK  161 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~-~~~~~~~~~~~DPdG-----~~iel~~~~  161 (170)
                      ..+.|+++.|.|++++.+...+ .|.++..... .......+++..+++     ..|+|++..
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~   70 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPL   70 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEES
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecC
Confidence            3678999999999999999985 6998875421 111123466776665     789998854

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=92.25  E-value=0.96  Score=29.43  Aligned_cols=55  Identities=13%  Similarity=0.157  Sum_probs=38.9

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857          105 PRGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       105 ~~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ..++.|+++.|.|+++..+...+ .|.++.........  .++..+..+..|+|.+..
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~--~~~~~~~~~~~l~l~~~~   81 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRW--NFLWVSGRAGMVVLQEEK   81 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTE--EEEEETTTTEEEEEEECC
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcE--EEEEecCCCcEEEEeccC
Confidence            45789999999999999999976 69988765422221  122234457888888753

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=91.67  E-value=0.59  Score=30.04  Aligned_cols=53  Identities=17%  Similarity=0.260  Sum_probs=37.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccce-EEEEECCCCCEEEEEecC
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKG-VAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~  161 (170)
                      ++.|+++.|+|++++.+...+ .|.++........... .+++ . ++..|+|++..
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~-~-~~~~l~l~~~~   59 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVL-P-GGLSIVLREHD   59 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEEC-T-TSCEEEEEEET
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEE-c-CCCEEEEEeCC
Confidence            568999999999999999976 6998875432221111 2333 4 78899998764

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=91.45  E-value=1.4  Score=27.54  Aligned_cols=31  Identities=3%  Similarity=-0.152  Sum_probs=22.3

Q ss_pred             ceeeeEEEEEeCC---hHHHHHHHHHhcCCEEeEe
Q 030857           11 KRFPHFTMFRIKD---PKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        11 ~~~l~hv~i~v~d---~~~s~~FY~~~lG~~~~~~   42 (170)
                      .-.+.|+++.|.|   ++++.+..++ .|.++...
T Consensus        69 ~~g~~hi~~~v~d~~~v~~~~~~l~~-~G~~~~~~  102 (127)
T 3e5d_A           69 NLGWAHIAISTGTKEAVDELTEKLRQ-DGFAIAGE  102 (127)
T ss_dssp             CSSCCCEEEECSSHHHHHHHHHHHHH-TTCCEEEE
T ss_pred             CCceEEEEEEcCCHHHHHHHHHHHHH-cCCeEecC
Confidence            3457999999999   5566555544 68888764

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=90.39  E-value=0.69  Score=29.84  Aligned_cols=51  Identities=18%  Similarity=0.214  Sum_probs=36.7

Q ss_pred             CceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857          107 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      .+.|+.+.|.|++++.+..++.|.++.......   ....+.-++|..|.|.+.
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~---~~~~~~~~~~~~l~l~~~   54 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSA---PHTEAVLDGGIRLAWDTV   54 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGC---SEEEEECTTSCEEEEEEH
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCC---ceEEEEcCCCeEEEEecC
Confidence            568999999999999999988888765432111   124444467888888863

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=89.97  E-value=1.1  Score=28.20  Aligned_cols=56  Identities=16%  Similarity=0.015  Sum_probs=37.8

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCC-CCEEEEEecC
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPD-DYWIEIFDLK  161 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPd-G~~iel~~~~  161 (170)
                      ..+.|+++.|.|++++.+...+ .|.++............+.+..++ +..+++.+..
T Consensus        12 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   69 (133)
T 4hc5_A           12 AYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPS   69 (133)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEECTTCSCEEEEECGG
T ss_pred             cceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCCceEEEEECCCCceEEEEecCc
Confidence            4789999999999999999965 799887643211112234455544 4567777654

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=89.47  E-value=2.7  Score=26.44  Aligned_cols=29  Identities=3%  Similarity=0.021  Sum_probs=24.7

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEe
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~   42 (170)
                      .+.|+++.|.|++++.+..++ .|.++...
T Consensus        71 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~   99 (135)
T 1f9z_A           71 AYGHIALSVDNAAEACEKIRQ-NGGNVTRE   99 (135)
T ss_dssp             SEEEEEEECSCHHHHHHHHHH-TTCEEEEE
T ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCEEecC
Confidence            578999999999999998866 69888764

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=89.18  E-value=3.6  Score=28.86  Aligned_cols=32  Identities=6%  Similarity=-0.073  Sum_probs=27.1

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEe
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~   42 (170)
                      .+..+|++++|.+.+.+.+|-+..+.+...-.
T Consensus        41 ~~~~DHIalRvn~~~~Ae~~~~~l~~~G~llS   72 (192)
T 1k4n_A           41 PLTADHISLRCHQNATAERWRRGFEQCGELLS   72 (192)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHHTTTEEEEE
T ss_pred             hccCcEEEEecCCHHHHHHHHHHHHHhchhhh
Confidence            36789999999999999999999887665544

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=88.92  E-value=1.5  Score=27.20  Aligned_cols=30  Identities=10%  Similarity=0.119  Sum_probs=24.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEe
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~   42 (170)
                      ..+.|+++.|.|++++.+..++ .|.++...
T Consensus        72 ~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~  101 (126)
T 2p25_A           72 LGLRHLAFKVEHIEEVIAFLNE-QGIETEPL  101 (126)
T ss_dssp             SSCCCEEEECSCHHHHHHHHHH-TTCCCCCC
T ss_pred             ccceEEEEEeCCHHHHHHHHHH-cCCccccc
Confidence            3678999999999999998866 68776543

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=87.71  E-value=2.1  Score=27.19  Aligned_cols=50  Identities=10%  Similarity=-0.021  Sum_probs=36.8

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ++.|+.+.|.|+++..+..++ .|.++.....     ..+.+...+|..+.|++..
T Consensus        13 ~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~l~l~~~~   63 (132)
T 3sk2_A           13 TPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP-----RYVAFPSSGDALFAIWSGG   63 (132)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHHHTCCCSEECS-----SEEEEECSTTCEEEEESSS
T ss_pred             eeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC-----CEEEEEcCCCcEEEEEeCC
Confidence            678999999999999999886 6887654321     1244555667888888754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=87.69  E-value=2.5  Score=27.74  Aligned_cols=51  Identities=10%  Similarity=0.068  Sum_probs=37.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      ++.|+.+.|.|++++.+...+ .|.++.....     ...++.-++|..+.|+....
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~-----~~~~~~~~~g~~l~l~~~~~   57 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP-----TFAMFVMKTGLRLGLWAQEE   57 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHHHHHTCCCSEECS-----SEEEEECTTSCEEEEEEGGG
T ss_pred             cccEEEEEeCCHHHHHHHHHHHcCCEEeccCC-----CEEEEEcCCCcEEEEecCCc
Confidence            568999999999999999887 7888765431     13555556788888876543

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=87.48  E-value=1.6  Score=27.91  Aligned_cols=51  Identities=12%  Similarity=0.173  Sum_probs=34.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHhcCCeEeec-CCCCccceEEEEECCCCCEEEEEec
Q 030857          107 GFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~~G~~~~~~-~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      .+.|+++.|.|+++..+...+.|.++... ...+.+   +++...+|..++|...
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~---~~~~~~~~~~l~l~~~   57 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVDKGSE---VHRAVHNGVEFSLYSI   57 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-----CC---EEEEEETTEEEEEEEC
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCCE---EEEEeCCCeEEEEEEC
Confidence            56899999999999999998889887665 221122   4444246777777543

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=87.27  E-value=2.4  Score=27.14  Aligned_cols=29  Identities=14%  Similarity=0.163  Sum_probs=23.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEe
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~   42 (170)
                      -...|+++.|.|++++.+..++  |.++...
T Consensus        73 ~~~~~~~~~v~dv~~~~~~l~~--G~~~~~~  101 (141)
T 2qnt_A           73 RRNMLLYFEHADVDAAFQDIAP--HVELIHP  101 (141)
T ss_dssp             CSSCEEEEEESCHHHHHC-CGG--GSCEEEE
T ss_pred             CCceEEEEEeCcHHHHHHHHHc--CCccccC
Confidence            3678999999999999988877  8886654

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=87.16  E-value=2.8  Score=27.33  Aligned_cols=48  Identities=8%  Similarity=0.184  Sum_probs=36.3

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      .+.|+.+.|.|++++.+...+ .|.++....  +   ..+++.. +|..|+|++.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~---~~~~~~~-~~~~l~l~~~   53 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN--P---EIIFYQM-NGFVLATWLV   53 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC--S---SEEEEEC-SSSEEEEEEH
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC--C---CEEEEEc-CCEEEEEEec
Confidence            568999999999999999987 688776543  1   2345544 6888898875

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=87.09  E-value=2.5  Score=27.25  Aligned_cols=56  Identities=20%  Similarity=0.178  Sum_probs=38.5

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC-CccceEEEEECCC---CCEEEEEecC
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPD---DYWIEIFDLK  161 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPd---G~~iel~~~~  161 (170)
                      ..+.|+.+.|.|+++..+...+ .|.++...... .......++.-++   +..|+|++..
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~   67 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNY   67 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEET
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecC
Confidence            3678999999999999999986 69988754211 1111234555444   5889998754

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=87.02  E-value=2.7  Score=26.29  Aligned_cols=50  Identities=18%  Similarity=0.236  Sum_probs=36.2

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .++.|+++.|+|++++.+...+ .|.++.....  .   .+++. .+|..++|.+..
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~--~---~~~~~-~~~~~~~l~~~~   59 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA--G---RIALE-FGHQKINLHQLG   59 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT--T---EEEEE-ETTEEEEEEETT
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEecC--C---eEEEE-cCCEEEEEEcCC
Confidence            4778999999999999999998 7999876541  1   13332 246777777653

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=86.55  E-value=4  Score=26.66  Aligned_cols=57  Identities=11%  Similarity=0.026  Sum_probs=37.6

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      +..|+++.|.|++++.+..++ .|.++.........+ ..+++..++                  +..+||+.....
T Consensus        65 ~~~hl~f~V~d~d~~~~~l~~-~G~~v~~~p~~~~~G-~~~~~~DPd------------------G~~iel~~~~~~  121 (144)
T 3r6a_A           65 RNTQATFLVDSLDKFKTFLEE-NGAEIIRGPSKVPTG-RNMTVRHSD------------------GSVIEYVEHSKI  121 (144)
T ss_dssp             GGCCEEEEESCHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEECTT------------------SCEEEEEEECC-
T ss_pred             cceEEEEEeCCHHHHHHHHHH-cCCEEecCCccCCCc-eEEEEECCC------------------CCEEEEEEcCCc
Confidence            458999999999999998866 698876543211222 234444333                  578999876443

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=86.04  E-value=2.3  Score=28.84  Aligned_cols=54  Identities=20%  Similarity=0.163  Sum_probs=37.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC-CccceEEEEECCCC------------------CEEEEEec
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDD------------------YWIEIFDL  160 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPdG------------------~~iel~~~  160 (170)
                      .++|+++.|.|+++..+...+ .|.++...... ......+|+..+++                  ..++|+..
T Consensus        34 ~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  107 (187)
T 3vw9_A           34 LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN  107 (187)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEE
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEe
Confidence            678999999999999999964 69988764321 11123456666653                  78999654

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=85.79  E-value=3.1  Score=27.05  Aligned_cols=50  Identities=10%  Similarity=0.124  Sum_probs=36.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .+.|+.+.|+|++++.+...+ .|.++....  ..   ..++.-.+|..|+|++..
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~---~~~~~~~~~~~l~l~~~~   75 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESS--PT---FSLFVLANGMKLGLWSRH   75 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--TT---EEEEECTTSCEEEEEETT
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCC--CC---eEEEEcCCCcEEEEEeCC
Confidence            678999999999999999887 688776432  11   244555557888887654

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=85.47  E-value=3  Score=27.07  Aligned_cols=50  Identities=16%  Similarity=0.187  Sum_probs=36.7

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .++.|+++.|.|+++..+...+ .|.++.....  .   ..++. .+|..++|.+..
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~--~---~~~l~-~~~~~l~l~~~~   72 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ--N---RKALI-FGAQKINLHQQE   72 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT--T---EEEEE-ETTEEEEEEETT
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC--C---eEEEE-eCCeEEEEeccC
Confidence            3678999999999999999998 7999887632  1   13332 245777777654

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=84.99  E-value=3.2  Score=28.08  Aligned_cols=55  Identities=16%  Similarity=0.143  Sum_probs=38.2

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC-CccceEEEEECC------------------CCCEEEEEec
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDP------------------DDYWIEIFDL  160 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DP------------------dG~~iel~~~  160 (170)
                      ..+.|+++.|.|+++..+...+ .|.++...... +.....+++..+                  ++..|+|++.
T Consensus        30 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~  104 (184)
T 2za0_A           30 FLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHN  104 (184)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEec
Confidence            3778999999999999999987 79988754311 111123455544                  3678999864

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=84.44  E-value=1.9  Score=32.15  Aligned_cols=32  Identities=6%  Similarity=0.144  Sum_probs=29.5

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEe
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~   42 (170)
                      ..++.++.|.+.|++++++.|+++||......
T Consensus       188 a~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          188 QFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             TEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             cceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            46899999999999999999999999999765

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=84.33  E-value=4.4  Score=25.26  Aligned_cols=30  Identities=7%  Similarity=0.009  Sum_probs=24.8

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEee
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRL   43 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~   43 (170)
                      ...|+++.|.|++++.+..++ .|.++....
T Consensus        72 ~~~~~~f~v~d~~~~~~~l~~-~G~~~~~~~  101 (126)
T 2qqz_A           72 KRAHPAFYVLKIDEFKQELIK-QGIEVIDDH  101 (126)
T ss_dssp             SSSCEEEEETTHHHHHHHHHH-TTCCCEEEC
T ss_pred             CceEEEEEcCCHHHHHHHHHH-cCCCccCCC
Confidence            578999999999999998876 688776553

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=84.23  E-value=6.5  Score=25.48  Aligned_cols=50  Identities=14%  Similarity=0.173  Sum_probs=36.6

Q ss_pred             CCceEEEEEeCCHHHHHHHH---H-hcCCeEeecCCCCccceEEEEECCCCCEEEEEecC
Q 030857          106 RGFGHIGITVDDVYKACERF---E-RLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l---~-~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .++.|+++.|.|+++..+..   . ..|.++......   + ..|+.  +|..|+|++..
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~---~-~~~~~--g~~~l~l~~~~   72 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR---G-KSYKH--GKTYLVFVQTE   72 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT---E-EEEEE--TTEEEEEEECC
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC---C-ceEec--CCeEEEEEEcC
Confidence            47789999999999999888   4 579988754322   1 23555  67788888764

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=83.63  E-value=4  Score=25.05  Aligned_cols=29  Identities=3%  Similarity=-0.153  Sum_probs=23.6

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEe
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~   42 (170)
                      ...|+++.|.|++++.+..++ .|.++...
T Consensus        64 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~   92 (119)
T 2pjs_A           64 DVPDLSIEVDNFDEVHARILK-AGLPIEYG   92 (119)
T ss_dssp             CCCSEEEEESCHHHHHHHHHH-TTCCCSEE
T ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCccccC
Confidence            467999999999999998876 58776554

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=83.49  E-value=5.7  Score=26.00  Aligned_cols=54  Identities=15%  Similarity=0.005  Sum_probs=36.6

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      .+.|+++.|.|++++.+-.++ .|.++.......... ..+++..++                  +..+||.+.
T Consensus        98 g~~~l~f~VdDvda~~~~l~~-~Gv~~~~~p~~~~~g-~~~~f~DPd------------------Gn~iel~q~  151 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSA-LGVRFTQEPTDMGPV-VTAILDDTC------------------GNLIQLMQI  151 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHH-TTCCEEEEEEECSSC-EEEEEECSS------------------SCEEEEEEC
T ss_pred             CceEEEeeechhhhhhhHHhc-CCcEEeeCCEEcCCe-EEEEEECCC------------------CCEEEEEEE
Confidence            356899999999999998866 688876653322222 344555433                  568888764

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=83.25  E-value=3.6  Score=27.21  Aligned_cols=50  Identities=22%  Similarity=0.315  Sum_probs=35.9

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      .++.|+++.|.|++++.+...+ .|.++......    ..+++.. ++..+.+++.
T Consensus         7 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~----~~~~~~~-g~~~~~l~~~   57 (160)
T 3r4q_A            7 SAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG----QLVFFKC-GRQMLLLFDP   57 (160)
T ss_dssp             SCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT----TEEEEEE-TTEEEEEECH
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC----cEEEEeC-CCEEEEEEec
Confidence            4789999999999999999988 79988765321    1244433 4566777654

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=83.13  E-value=3.3  Score=31.77  Aligned_cols=49  Identities=12%  Similarity=0.042  Sum_probs=36.0

Q ss_pred             CceeeeEEEEEeCChH----------HHHHHHHHhcCCEEeEeeecCCcceEEEeeeccC
Q 030857           10 NKRFPHFTMFRIKDPK----------VSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   59 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~----------~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~   59 (170)
                      ..+..+|+++.+-++.          ...+++ ..|||.+.....++..++...+++..+
T Consensus        76 ~~i~nDHiA~RT~~~~~~g~l~~gl~~lariF-~~lGy~p~G~Ydl~~k~l~a~afrp~d  134 (340)
T 3iuz_A           76 GXVVFDHGALRTVXWRDNGALPEGEAAFTRIL-RPLGYRLNGNYPLDRISMTGRSYAHAD  134 (340)
T ss_dssp             CCBCEEEEEEEEECCSCCTTSCSTTHHHHHHH-HHHTEEEEEEEEEGGGTEEEEEEEETT
T ss_pred             CCeecceeEEEeeecCCcCcCchhHHHHHHHH-HHcCCeEcceeccCCCCCeEEEecCCC
Confidence            3467899999986544          456777 458999999888777777666666544

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=80.77  E-value=7.5  Score=23.77  Aligned_cols=27  Identities=15%  Similarity=0.281  Sum_probs=22.1

Q ss_pred             eEEEEEeCChHHHHHHHHHhcCCEEeEe
Q 030857           15 HFTMFRIKDPKVSLDFYSRVLGMSLLKR   42 (170)
Q Consensus        15 ~hv~i~v~d~~~s~~FY~~~lG~~~~~~   42 (170)
                      .|+++.|.|++++.+-.++ .|.++...
T Consensus        65 ~~~~~~v~d~~~~~~~l~~-~G~~~~~~   91 (118)
T 2i7r_A           65 IIIHIEVEDVDQNYKRLNE-LGIKVLHG   91 (118)
T ss_dssp             EEEEEECSCHHHHHHHHHH-HTCCEEEE
T ss_pred             EEEEEEECCHHHHHHHHHH-CCCceecC
Confidence            3799999999999998876 58877544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	170
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	4e-34
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	5e-15
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-14
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	3e-13
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	1e-12
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	1e-10
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	4e-10
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	6e-10
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	2e-08
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	7e-07
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	2e-06
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	2e-05
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	2e-05
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	3e-05
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-04
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	1e-04
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	1e-04
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	0.002
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	0.002

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 4e-34
 Identities = 93/166 (56%), Positives = 116/166 (69%), Gaps = 2/166 (1%)

Query: 1   MKLPTDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT 60
                 ++ +      TM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED 
Sbjct: 12  CSDADPSTKDFLLQQ-TMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDK 70

Query: 61  ASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK 120
              P +  ++  W   + AT+ELTHNWGTE D     YHNGNS+PRGFGHIGI V DVY 
Sbjct: 71  NDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQS-YHNGNSDPRGFGHIGIAVPDVYS 129

Query: 121 ACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 166
           AC+RFE LGV+F KKPD GK+KG+AFI+DPD YWIEI +   +  +
Sbjct: 130 ACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKMATL 175

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 66.8 bits (162), Expect = 5e-15
 Identities = 25/143 (17%), Positives = 35/143 (24%), Gaps = 4/143 (2%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
           KRF H   F   D       +S  LGM    + D                          
Sbjct: 11  KRF-HHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTS--GDLRFLFTA 67

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
                     I+ T      S          +S   G   + I V+D   A       G 
Sbjct: 68  PYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGA 127

Query: 131 EFAKKP-DGGKLKGVAFIKDPDD 152
             +  P    +   +A +K   D
Sbjct: 128 IPSSPPIVLNEAVTIAEVKLYGD 150

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 28/160 (17%)

Query: 12  RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 71
           R  H TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY              
Sbjct: 2   RLLH-TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY-------------- 46

Query: 72  VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 131
                + A IELT+NWG +       Y           HI ++VD+  +ACE+  + G  
Sbjct: 47  -GPETEEAVIELTYNWGVDKYELGTAYG----------HIALSVDNAAEACEKIRQNGGN 95

Query: 132 FAKKP--DGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 169
             ++     G    +AF++DPD Y IE+ + K  G+  G+
Sbjct: 96  VTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGLGN 135

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 61.2 bits (147), Expect = 3e-13
 Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 29/153 (18%)

Query: 10  NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVD 69
           ++R  H TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY            
Sbjct: 1   SRRMLH-TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGP---------- 49

Query: 70  RTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG 129
                              T  +  +            +GHI I V+DV +      +  
Sbjct: 50  ---------------EMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHD 94

Query: 130 VEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT 162
           V    + + G +   AF+ DPD Y+IE+ + KT
Sbjct: 95  VPIDYEDESGFM---AFVVDPDGYYIELLNEKT 124

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 59.5 bits (143), Expect = 1e-12
 Identities = 21/159 (13%), Positives = 38/159 (23%), Gaps = 31/159 (19%)

Query: 11  KRFPHF--TMFRIKDP----KVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAP 64
           KRF  F     RI  P       + FY   L +  +         +     G        
Sbjct: 1   KRFSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHAD--- 56

Query: 65  ADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACER 124
                             L              + +                ++     +
Sbjct: 57  ----------------YHLEFTQYEGGSTAPVPHPDS-----LLVFYVPNAVELAAITSK 95

Query: 125 FERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 163
            + +G +  +  +     G   I+DPD + I   + K I
Sbjct: 96  LKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKGI 134

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 54.7 bits (130), Expect = 1e-10
 Identities = 21/149 (14%), Positives = 51/149 (34%), Gaps = 12/149 (8%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
            R  +     ++    ++ F+   +G++L  R +    +++    G        A     
Sbjct: 8   LRMDN-VSIVVESLDNAISFFEE-IGLNLEGRANVE-GEWAGRVTGLGSQCVEIAM---- 60

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
            + T    + IEL+      +  D   +        G+  +  TV+D+ +   R  + G 
Sbjct: 61  -MVTPDGHSRIELSRFLTPPTIAD---HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGA 116

Query: 131 EFAKKP-DGGKLKGVAFIKDPDDYWIEIF 158
           E   +         + +I+  +   I + 
Sbjct: 117 ELVGEVVQYENSYRLCYIRGVEGILIGLA 145

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 53.7 bits (128), Expect = 4e-10
 Identities = 22/150 (14%), Positives = 37/150 (24%), Gaps = 10/150 (6%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
             F H       D   +   +S  LG  L  R D      +   L            +  
Sbjct: 12  LAF-HHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRS------GSLSF 64

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
                        T    + S    + +   +        + + V D   A       G 
Sbjct: 65  LFTAPYAHGADAATAALPSFSAAAARRFAADH--GLAVRAVALRVADAEDAFRASVAAGA 122

Query: 131 EFAKKP-DGGKLKGVAFIKDPDDYWIEIFD 159
             A  P D G+   +A ++   D  +    
Sbjct: 123 RPAFGPVDLGRGFRLAEVELYGDVVLRYVS 152

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 52.7 bits (125), Expect = 6e-10
 Identities = 19/147 (12%), Positives = 36/147 (24%), Gaps = 19/147 (12%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
               +   D   +  +Y    G   L R + PE       +                   
Sbjct: 9   DHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMM---------------APAA 53

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 134
                  ++        +     +   ++   G  H+   VDD+          GV+   
Sbjct: 54  KLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLY 113

Query: 135 KP--DGGKLKGVAFI--KDPDDYWIEI 157
                G     + F+  K      IE+
Sbjct: 114 DEPKLGTGGNRINFMHPKSGKGVLIEL 140

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 48.7 bits (115), Expect = 2e-08
 Identities = 22/154 (14%), Positives = 36/154 (23%), Gaps = 24/154 (15%)

Query: 11  KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDR 70
           K       F + + K +  +YS   GM L+                  +           
Sbjct: 6   KGMDAVV-FAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTN----------- 53

Query: 71  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 130
                   A   LT      +        +      G   + I V D   A       G 
Sbjct: 54  ------GSARFVLTSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGA 107

Query: 131 EFAKKP-----DGGKLKGVAFIKDPDDYWIEIFD 159
               +P     + G +  +A I         + D
Sbjct: 108 RSVAEPYELKDEHGTVV-LAAIATYGKTRHTLVD 140

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 44.2 bits (103), Expect = 7e-07
 Identities = 20/146 (13%), Positives = 38/146 (26%), Gaps = 27/146 (18%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
           H      K+   +  FY  VLG+  +K     +     +    + T              
Sbjct: 8   HHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTG------------- 54

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVE 131
                           S  +                IG+ V          ERFE+  V+
Sbjct: 55  ----------SPGTELSFFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVK 104

Query: 132 FAKKPDGGKLKGVAFIKDPDDYWIEI 157
            ++         + F +D +   + +
Sbjct: 105 HSEMTTYANRPALQF-EDAEGLRLVL 129

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 42.6 bits (99), Expect = 2e-06
 Identities = 17/145 (11%), Positives = 36/145 (24%), Gaps = 31/145 (21%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
               F ++D +        V     +   D  +                       +   
Sbjct: 6   SHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSL--------------------SREK 45

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 134
           F     I +    G +       +              I   D  +  ER  +LG++   
Sbjct: 46  FFLIGDIWVAIMQGEKLAERSYNHI----------AFKIDDADFDRYAERVGKLGLDMRP 95

Query: 135 KPDGGKLKG-VAFIKDPDDYWIEIF 158
                + +G   +  D D++  E+ 
Sbjct: 96  PRPRVEGEGRSIYFYDDDNHMFELH 120

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 39.8 bits (92), Expect = 2e-05
 Identities = 16/106 (15%), Positives = 32/106 (30%), Gaps = 11/106 (10%)

Query: 57  YEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD 116
            E      AD  +     F   +   +          +F+              I I V+
Sbjct: 20  LEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSGI----------IIHIEVE 69

Query: 117 DVYKACERFERLGVEFAKKPDGGKLKG-VAFIKDPDDYWIEIFDLK 161
           DV +  +R   LG++    P           ++ P    ++ + +K
Sbjct: 70  DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK 115

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 40.4 bits (94), Expect = 2e-05
 Identities = 17/103 (16%), Positives = 26/103 (25%), Gaps = 4/103 (3%)

Query: 57  YEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD 116
           +E                  +   I L  N    S   +    +G         +   V 
Sbjct: 27  FEIMGFTKVATHRSKNVHLYRQGEINLILNNEPNSIASYFAAEHGP----SVCGMAFRVK 82

Query: 117 DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 159
           D  KA  R   LG +      G     +  IK      + + D
Sbjct: 83  DSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLID 125

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.5 bits (91), Expect = 3e-05
 Identities = 19/144 (13%), Positives = 32/144 (22%), Gaps = 37/144 (25%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
           +     + D   S+ FY  +LG  L  R                                
Sbjct: 6   NHLTLAVADLPASIAFYRDLLGFRLEAR-------------------------------- 33

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 134
                                +  + G +        GI   D  +   +    GV   K
Sbjct: 34  ---WDQGAYLELGSLWLCLSREPQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWK 90

Query: 135 KPDGGKLKGVAFIKDPDDYWIEIF 158
           +          +  DPD + +E  
Sbjct: 91  QNRSEG--DSFYFLDPDGHRLEAH 112

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 38.1 bits (87), Expect = 1e-04
 Identities = 20/146 (13%), Positives = 40/146 (27%), Gaps = 38/146 (26%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
           +     + D + S+ F+  +LG++L  R +                              
Sbjct: 6   NHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLT------------------------ 41

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEF 132
                                +       +   + H   TV  +D     +R E+ GV  
Sbjct: 42  ----------CGDLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTI 91

Query: 133 AKKPDGGKLKGVAFIKDPDDYWIEIF 158
            K+          +  DPD + +E+ 
Sbjct: 92  WKQNKSEG--ASFYFLDPDGHKLELH 115

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 38.0 bits (87), Expect = 1e-04
 Identities = 22/149 (14%), Positives = 40/149 (26%), Gaps = 33/149 (22%)

Query: 12  RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 71
           RF H  +    +   + D +++VLG  L +++          FL                
Sbjct: 5   RFDH-ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK----------- 52

Query: 72  VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 131
                        H+      P+    H+             T +D+ +A +        
Sbjct: 53  ------------AHDVAFIHHPEKGRLHH-------VSFHLETWEDLLRAADLISMTDTS 93

Query: 132 FAKKPDGGKLKGV--AFIKDPDDYWIEIF 158
               P    L      +  DP     E+F
Sbjct: 94  IDIGPTRHGLTHGKTIYFFDPSGNRNEVF 122

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 38.4 bits (89), Expect = 1e-04
 Identities = 16/130 (12%), Positives = 35/130 (26%), Gaps = 17/130 (13%)

Query: 27  SLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN 86
             +FY ++      +  D       L                 + +        I L   
Sbjct: 21  WANFYEKLFNFREARYFDIKGEYTGLTS---------------KAMSAPDGMIRIPLNEE 65

Query: 87  WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAF 146
               +    +     N E  G  H+    DD+ K  +  +++G+ F   P     + +  
Sbjct: 66  SSKGAGQIEEFLMQFNGE--GIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEG 123

Query: 147 IKDPDDYWIE 156
                   ++
Sbjct: 124 RLPDHGEPVD 133

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 34.2 bits (77), Expect = 0.002
 Identities = 17/143 (11%), Positives = 31/143 (21%), Gaps = 38/143 (26%)

Query: 16  FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 75
                  +P  +  FY  +LGM +     +                              
Sbjct: 5   VANIATPEPARAQAFYGDILGMPVAMDHGWI----------------------------- 35

Query: 76  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 135
                     +           +            + I VD+  +   R  + G+     
Sbjct: 36  --------VTHASPLEAHAQVSFAREGGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYG 87

Query: 136 P-DGGKLKGVAFIKDPDDYWIEI 157
           P          F++DP    I I
Sbjct: 88  PVTEAWGVQRLFLRDPFGKLINI 110

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 34.6 bits (78), Expect = 0.002
 Identities = 16/146 (10%), Positives = 31/146 (21%), Gaps = 36/146 (24%)

Query: 15  HFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 74
                R+ D   +L+ Y  +LG+  + R D   +                          
Sbjct: 9   GHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYL------------------------ 44

Query: 75  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 134
                       W                     G   +  D + +        G    +
Sbjct: 45  ----------KAWTEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQ 94

Query: 135 KPDGGKLKG--VAFIKDPDDYWIEIF 158
            P G           + P  +  E++
Sbjct: 95  LPAGELNSCGRRVRFQAPSGHHFELY 120

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	170
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.95
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.9
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.89
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.88
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.87
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.86
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.85
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.85
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.84
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.84
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.83
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.82
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.8
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.8
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.8
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.79
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.79
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.79
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.78
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.78
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.77
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.77
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.77
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.76
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.74
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.73
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.71
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.67
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.65
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.62
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.52
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.43
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.35
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.33
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.31
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.25
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.23
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.9
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.46
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.19
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	96.06
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	95.69
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	93.37
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	92.71
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	92.3
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	91.73
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	90.51
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	89.76
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	89.2
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	87.05
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	86.87
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	86.51
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	83.89
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	83.47
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	82.73
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	82.63
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	81.64
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	80.68
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	80.49
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	80.01

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1e-26  Score=163.60  Aligned_cols=162  Identities=59%  Similarity=1.090  Sum_probs=112.1

Q ss_pred             CCCCCCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEE
Q 030857            5 TDTSCNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   84 (170)
Q Consensus         5 ~~~~~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~   84 (170)
                      |++.+..++++|++|.|+|+++|++||+++|||++......+...+...+...+..............+.........+.
T Consensus        15 ~~~~~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (176)
T d1qipa_          15 ADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELT   94 (176)
T ss_dssp             CCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEE
T ss_pred             CCCCccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEE
Confidence            56677889999999999999999999999999999988777777777777665433211111111111112222333332


Q ss_pred             eccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCccc
Q 030857           85 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIG  164 (170)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  164 (170)
                      ........... ..........++.|+||.++|+++++++|+++|+++...|..+...+++||+|||||.|||+|+.+..
T Consensus        95 ~~~~~~~~~~~-~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~~~~  173 (176)
T d1qipa_          95 HNWGTEDDETQ-SYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKMA  173 (176)
T ss_dssp             EETTGGGCTTC-CCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTTTGG
T ss_pred             EeeccccccCc-CccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCCCCC
Confidence            22221111100 01122223458899999999999999999999999999987766666789999999999999999877


Q ss_pred             ccC
Q 030857          165 KIG  167 (170)
Q Consensus       165 ~~~  167 (170)
                      +++
T Consensus       174 ~~~  176 (176)
T d1qipa_         174 TLM  176 (176)
T ss_dssp             GCC
T ss_pred             ccC
Confidence            664

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.90  E-value=4.1e-23  Score=140.74  Aligned_cols=130  Identities=14%  Similarity=0.201  Sum_probs=91.8

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecC-----------CcceEEEeeeccCCCCCCCCcccceeeecCCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKP   78 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (170)
                      ..++++|++|.|+|+++|++||++ |||++..+....           .....+.++...+                 +.
T Consensus         6 ~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~~   67 (149)
T d1ss4a_           6 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD-----------------GH   67 (149)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT-----------------SS
T ss_pred             CCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecc-----------------cc
Confidence            446999999999999999999998 999998765322           2233445554432                 23


Q ss_pred             cEEEEEeccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCc-cceEEEEECCCCCEEEE
Q 030857           79 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEI  157 (170)
Q Consensus        79 ~~lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel  157 (170)
                      ..++++.....+.....   ........|+.|++|.|+|+++++++|+++|+++..+|.... ..+.+|++||||++|||
T Consensus        68 ~~~~l~~~~~~~~~~~~---~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl  144 (149)
T d1ss4a_          68 SRIELSRFLTPPTIADH---RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGL  144 (149)
T ss_dssp             CEEEEEEEEESCCCCBC---TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEE
T ss_pred             eEEEEEeeccccCcccc---cccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEE
Confidence            56666553222221111   111122347889999999999999999999999987774322 23578999999999999


Q ss_pred             Eec
Q 030857          158 FDL  160 (170)
Q Consensus       158 ~~~  160 (170)
                      +|+
T Consensus       145 ~e~  147 (149)
T d1ss4a_         145 AEE  147 (149)
T ss_dssp             EEE
T ss_pred             EEc
Confidence            986

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=6.7e-22  Score=131.85  Aligned_cols=132  Identities=39%  Similarity=0.679  Sum_probs=89.3

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      +++.|++|.|+|+++|++||+++|||++..........+....+......               .....+.........
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~   65 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK   65 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceee---------------ecccccccccccccc
Confidence            58999999999999999999999999999876655555544444432211               012222222221111


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCC--ccceEEEEECCCCCEEEEEecCcccccCC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKTIGKIGG  168 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iel~~~~~~~~~~~  168 (170)
                            .    ....+..|+++.+++++.+.++++++|..+...|...  ...+++||+|||||.|||+|...+.+..|
T Consensus        66 ------~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~~  134 (135)
T d1f9za_          66 ------Y----ELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGLG  134 (135)
T ss_dssp             ------C----CCCSSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-------C
T ss_pred             ------c----cccccceeeccchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccccCC
Confidence                  1    1223678999999999999999999999988766322  22457889999999999999998888765

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.88  E-value=2.3e-22  Score=136.17  Aligned_cols=137  Identities=16%  Similarity=0.210  Sum_probs=95.3

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      +-++++||+|.|+|+++|++||+++||+................+....             ++...+...+++......
T Consensus         4 m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~el~~~~~~   70 (145)
T d1jc4a_           4 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPA-------------AKLTEHMTQVQVMAPLND   70 (145)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESS-------------SSCCTTCCEEEEEEESST
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeece-------------eccccccchhhhhhhhcc
Confidence            4569999999999999999999999999998876655544444433221             112223568888775444


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeec-CCCCccce-EEEE--ECCCCCEEEEEecC
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLKG-VAFI--KDPDDYWIEIFDLK  161 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~-~~~~~~~~-~~~~--~DPdG~~iel~~~~  161 (170)
                      ......  .........|++|+||.|+|+++++++|+++|+++..+ +..+..++ .+|+  +||+|++|||+|..
T Consensus        71 ~~~~~~--~~~~~~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          71 ESTVAK--WLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TSHHHH--HHHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             cCcccc--cccccCCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            321110  11111234589999999999999999999999998754 33344443 4455  68999999999964

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.87  E-value=1.3e-21  Score=128.36  Aligned_cols=114  Identities=14%  Similarity=0.113  Sum_probs=85.1

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      ++++|+.|.|+|+++|++||+++||+++.....    .+  +.+..+                   +..+.+......+.
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~--~~~~~g-------------------~~~l~l~~~~~~~~   55 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIG-------------------SHCLMLSQNHLVPL   55 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEET-------------------TEEEEEESSCSSSC
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----Ce--EEEEEc-------------------CceeeeeecccCCC
Confidence            479999999999999999999999999876532    22  233332                   35666654322111


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  161 (170)
                            ...     +...+++|.|+|+++++++++++|+++..+|...+++ +.+||+|||||+||+.+.+
T Consensus        56 ------~~~-----~~~~~~~f~v~D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          56 ------ENF-----QSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             ------CCC-----CSCEEEEEECSCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             ------CCC-----CcceEEEEEECCHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEeC
Confidence                  001     1225899999999999999999999999887655544 5799999999999999863

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.86  E-value=7.2e-21  Score=128.30  Aligned_cols=119  Identities=14%  Similarity=0.178  Sum_probs=85.2

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 030857           16 FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   95 (170)
Q Consensus        16 hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   95 (170)
                      .|++.|+|+++|++||+++|||++..+...+. .+..++++.++.                 ...+++....+....   
T Consensus        12 RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~~-----------------~~~l~~~~~~~~~~~---   70 (137)
T d1twua_          12 RIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA-----------------DYHLEFTQYEGGSTA---   70 (137)
T ss_dssp             EEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSSS-----------------SEEEEEEEETTCCCC---
T ss_pred             EEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCCC-----------------ceeeecccccccccc---
Confidence            34445689999999999999999988755433 356666665432                 456666655443221   


Q ss_pred             CCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           96 KGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        96 ~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                             ..+.+.+|++|.|++   +++++++|+++|+++...+......+.+||+||||+.|||+++..
T Consensus        71 -------~~~~~~~hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          71 -------PVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             -------CCCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSCC
T ss_pred             -------cccccCceEEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCCC
Confidence                   112356899999876   888899999999998865532222457899999999999998764

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.85  E-value=1.3e-20  Score=127.82  Aligned_cols=126  Identities=15%  Similarity=0.148  Sum_probs=86.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCc-ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .+++||+|.|+|+++|++||+++|||++..+....+. .....+.+....               .....+.+.......
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~~~~   69 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTG---------------SPGTELSFFEIPLVG   69 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTC---------------CTTSEEEEEECTTCC
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEeccccc---------------ceeeEEeeccccccc
Confidence            4799999999999999999999999999987654332 223333332211               013355554332221


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      .      .   ....++++|++|.|+|   ++++.++|++.|+.+.... ....++.+||+|||||.|||++...
T Consensus        70 ~------~---~~~~~~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~-~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          70 R------T---YRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMT-TYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             B------C---BCCBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSE-EETTEEEEEEECTTCCEEEEEECTT
T ss_pred             C------C---ccCCCceeEEEEecCCchhHHHHhhhhhccceeeeCcc-ccCCeEEEEEECCCCCEEEEEEeCC
Confidence            1      1   1122367999999998   7788999999999874432 2233567899999999999998754

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.85  E-value=2.3e-20  Score=129.31  Aligned_cols=119  Identities=13%  Similarity=0.163  Sum_probs=85.7

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .++++||+|.|+|+++|++||+++|||++..+...........++.....                 .....+..  .+ 
T Consensus         3 ~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~--~~-   62 (162)
T d1mpya2           3 AVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK-----------------AHDVAFIH--HP-   62 (162)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB-----------------SCSEEEEE--CS-
T ss_pred             cccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccc-----------------cccccccc--cC-
Confidence            36899999999999999999999999999887665555544455443221                 11122211  11 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHH---HHHHHHHhcCCeEeecCCCCc--cceEEEEECCCCCEEEEEecCc
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~---~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~~  162 (170)
                                   .+++..|++|.+.+++   +++++|++.|+++...|....  ..+.+||+|||||.|||...+.
T Consensus        63 -------------~~~~~~h~~~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          63 -------------EKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             -------------SSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             -------------CCCccceeEEEEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence                         1126789999998755   678999999999887664322  2357999999999999997654

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.84  E-value=3e-20  Score=120.82  Aligned_cols=108  Identities=13%  Similarity=0.156  Sum_probs=79.3

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      ++++||.|.|+|++++++||+++|||++..+..   ..  ..++..+.                  ...+.+......+ 
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~--~~~~~~~~------------------~~~~~~~~~~~~~-   57 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NA--FAVMRDND------------------GFILTLMKGKEVQ-   57 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TT--EEEEECTT------------------CCEEEEEECSSCC-
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---Cc--ceeeeecc------------------eeeeeeeeeeccc-
Confidence            689999999999999999999999999987642   22  22333221                  3456665432211 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEE
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  158 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  158 (170)
                                   ..+..|++|.|+|   +++++++++++|+++...+..  .++.+||+|||||.|||.
T Consensus        58 -------------~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~--~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          58 -------------YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHA--HAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             -------------CCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCCCEEC---CEEEEEEETTTEEEEEE
T ss_pred             -------------ccccceeeeeeccccchhhhhhhHHHcCCccccCCCC--ceEEEEEECCCCCEEEEE
Confidence                         1255799999986   777899999999987655533  245789999999999995

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.84  E-value=6.1e-20  Score=128.22  Aligned_cols=118  Identities=10%  Similarity=0.042  Sum_probs=81.1

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++||+|.|+|++++++||+++|||++..+..    .+..+....+..                 ...+.+.....+.
T Consensus        10 I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~~-----------------~~~~~~~~~~~~~   68 (170)
T d1zswa2          10 IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGEA-----------------FGEIVVKYLDGPT   68 (170)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTCS-----------------TTCEEEEECCSSB
T ss_pred             hCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccCcc-----------------ceEEEeccccccc
Confidence            3579999999999999999999999999988732    222222222111                 1223332222111


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      .      .    ...++++||+|.|+|   ++++++++++.|+++.. +.+..+++.+||+|||||.|||...
T Consensus        69 ~------~----~~~~~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~-~~~~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          69 E------K----PGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSG-IIDRFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             C------B----CCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCCC-CEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             c------c----cCccccceEEEEeCChHHHHHHHHHHHhcCCCccc-cccCCCEEEEEEECCCCcEEEEEEC
Confidence            1      0    112368899999986   88889999999998743 3233345679999999999999874

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.83  E-value=6.1e-20  Score=122.32  Aligned_cols=117  Identities=15%  Similarity=0.156  Sum_probs=82.5

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCc-ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .+++|++|.|+|++++++||+++|||++......... .....++..                   +...+++...... 
T Consensus         3 ~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~-   62 (130)
T d1r9ca_           3 EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLI-------------------GDIWVAIMQGEKL-   62 (130)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEE-------------------TTEEEEEEECCCC-
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEec-------------------CCEEEeecccccc-
Confidence            4799999999999999999999999999887543321 112222222                   1345555432111 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCeEeecCCC-CccceEEEEECCCCCEEEEEecC
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                                   ...+..|++|.|+  |+++++++++++|+++...+.. ...++.+||+|||||+|||....
T Consensus        63 -------------~~~~~~~~~f~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          63 -------------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             -------------SSCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             -------------cccceeeeeecccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence                         1125579999875  7999999999999998766533 23345799999999999998754

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.82  E-value=5.8e-19  Score=117.62  Aligned_cols=123  Identities=37%  Similarity=0.654  Sum_probs=85.9

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .|++|++|.|+|+++|++||+++|||++..+...................               ...............
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~   66 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEM---------------SSTVLELTYNYGVTS   66 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccc---------------cccccccccccCccc
Confidence            58999999999999999999999999999876555444433333322110               011222211111111


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                            .    .......++++.+++++.+++++.+.++++...+..   .+.+||+|||||+|||++...
T Consensus        67 ------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~DPdGn~iEl~~~~~  124 (139)
T d2c21a1          67 ------Y----KHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES---GFMAFVVDPDGYYIELLNEKT  124 (139)
T ss_dssp             ------C----CCCSSEEEEEEEESCHHHHHHHHHHTTCCEEEECSS---SSEEEEECTTSCEEEEEEHHH
T ss_pred             ------c----cCCCccceeeeehhhHHHHHHHHHHcCCceeeCCCC---cEEEEEECCCCCEEEEEECCC
Confidence                  1    112366789999999999999999999998877643   245899999999999998654

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.80  E-value=1.1e-18  Score=117.60  Aligned_cols=113  Identities=20%  Similarity=0.302  Sum_probs=80.1

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++|++|.|+|++++++||+++|||++..+..    ...  ++..+                   ...+.+........
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~~--~~~~~-------------------~~~~~l~~~~~~~~   57 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TGA--YLTCG-------------------DLWVCLSYDEARQY   57 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TEE--EEEET-------------------TEEEEEEECTTCCC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec----ccc--ccccc-------------------cccceeeccccccc
Confidence            479999999999999999999999999987642    111  22221                   12333333222211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEe--CCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v--~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      ..         ....+..|++|.+  +|+++++++|+++|+++...+..  .++.+||+|||||.|||.+.
T Consensus        58 ~~---------~~~~~~~h~~~~~~~~d~~~~~~~l~~~Gv~~~~~~~~--~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          58 VP---------PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS--EGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CC---------GGGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCS--SSEEEEEECTTCCEEEEEEC
T ss_pred             CC---------CcCCccceeeeechHHHHHHHHHHHHHCCCeEeecCCC--CceEEEEECCCCCEEEEEEC
Confidence            11         1122567888888  48999999999999999877643  34578999999999999764

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.80  E-value=2.1e-19  Score=120.22  Aligned_cols=108  Identities=15%  Similarity=0.237  Sum_probs=79.6

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      ..++||+|.|+|++++++||+++|||++..+..      ...+++.++.                 ...+.+...  +. 
T Consensus         3 ~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~-----------------~~~l~l~~~--~~-   56 (131)
T d1lgta1           3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR-----------------AWRIAVQQG--EV-   56 (131)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB-----------------SCSEEEEEC--TT-
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCC-----------------ceEEEEecC--CC-
Confidence            369999999999999999999999999987632      1334444321                 234444321  11 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCC----CccceEEEEECCCCCEEEEEe
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~  159 (170)
                                    .++.|++|.|.   |++++.++|+++|+++...+..    ....+.+||+|||||.|||..
T Consensus        57 --------------~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          57 --------------DDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             --------------CEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             --------------CCceEEEEEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEe
Confidence                          16689999996   5788899999999999876632    122357899999999999974

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.80  E-value=1.4e-18  Score=118.14  Aligned_cols=114  Identities=18%  Similarity=0.260  Sum_probs=81.5

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ...+++||.|.|+|++++++||+++|||++..+..    .. ..+...+..                ....+.+...  .
T Consensus        13 ~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~-~~~~~~~~~----------------~~~~~~~~~~--~   69 (146)
T d1f1ua1          13 DIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NT-IYLRSLEEF----------------IHHNLVLRQG--P   69 (146)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SE-EEEECTTCC----------------SSCSEEEEEC--S
T ss_pred             CCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC----Cc-eeeeccccc----------------ccceeecccc--C
Confidence            45799999999999999999999999999988632    11 222221110                0122333221  1


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCCc--cceEEEEECCCCCEEEEEecC
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~  161 (170)
                                     ..++.|++|.+.   |++++.++|+++|+++...+....  .++.+||+|||||.|||....
T Consensus        70 ---------------~~~~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          70 ---------------IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             ---------------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             ---------------CCCCceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEec
Confidence                           126689999997   688999999999999987664322  245789999999999998753

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.79  E-value=9.2e-19  Score=113.10  Aligned_cols=106  Identities=17%  Similarity=0.237  Sum_probs=75.1

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 030857           16 FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   95 (170)
Q Consensus        16 hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   95 (170)
                      +..|.|+|+++|++||+++|||++.....    .+ ..+....                   .....+... ....    
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~-~~~~~~~-------------------~~~~~~~~~-~~~~----   55 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG----WI-VTHASPL-------------------EAHAQVSFA-REGG----   55 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS----SE-EEEEEEE-------------------EEEEEEEEE-SSSB----
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc----ce-eEecccc-------------------ccceeeecc-cccC----
Confidence            68899999999999999999999987632    12 2222211                   112222211 1111    


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEE
Q 030857           96 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  158 (170)
Q Consensus        96 ~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  158 (170)
                        .      .....|++|.++|+++++++++++|+++..+|...+++ +.+|++|||||+|||+
T Consensus        56 --~------~~~~~~~~~~~~dvd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          56 --S------GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             --T------TBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             --C------CCceeEEEEEecCHHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence              0      11346899999999999999999999998877554443 6889999999999986

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.79  E-value=1.8e-19  Score=119.85  Aligned_cols=121  Identities=19%  Similarity=0.184  Sum_probs=80.2

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC-
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES-   91 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~-   91 (170)
                      ||+|++|.|+|+++|++||++ |||.+.......  .+  +.+..+.                  ...+.+........ 
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~--~~--~~~~~~~------------------~~~~~~~~~~~~~~~   58 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA--PH--TEAVLDG------------------GIRLAWDTVETVRSY   58 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC--SE--EEEECGG------------------GCEEEEEEHHHHHHH
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCccccccccc--cc--eeeeccc------------------eeeeeeccccccccc
Confidence            799999999999999999977 898876654322  12  2222111                  23444432110000 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCcc-ceEEEEECCCCCEEEEEecC
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  161 (170)
                      .+.     .......+..|++|.|++   +++++++++++|+++..+|....+ .+.+||+|||||+|||.++.
T Consensus        59 ~~~-----~~~~~~~~~~~l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          59 DPE-----WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             CTT-----CCCCCSSCSCEEEEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             CCC-----CCCCccccceeEeeeeccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecC
Confidence            000     001112345799999986   777899999999999988765444 36889999999999998763

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.79  E-value=2.4e-18  Score=115.12  Aligned_cols=110  Identities=18%  Similarity=0.213  Sum_probs=78.0

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++||+|.|+|++++++||+++||+++..+..  .  .  .++..+                   +..+..........
T Consensus         3 ~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~--~--~--~~~~~~-------------------~~~~~~~~~~~~~~   57 (134)
T d1nkia_           3 TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q--G--AYLELG-------------------SLWLCLSREPQYGG   57 (134)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECTTCCC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc--c--e--eeeecC-------------------CeEEEEeeeccccc
Confidence            479999999999999999999999999987643  1  1  222221                   23454443322211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEe--CCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v--~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                                  ...+..|++|.+  +|+++++++|+++|+++...+..+  ++.+||+|||||.|||..-
T Consensus        58 ------------~~~~~~h~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~--~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          58 ------------PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSE--GDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ------------CCSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCSS--SCEEEEECTTCCEEEEESC
T ss_pred             ------------cccccccchhccccchHHHHHHHHHHCCCcCccCCCcc--eeEEEEECCCCCEEEEEEC
Confidence                        111445666666  589999999999999987765432  4568999999999999763

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.78  E-value=6e-19  Score=118.17  Aligned_cols=109  Identities=17%  Similarity=0.278  Sum_probs=80.2

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+|+||+|.|+|++++++||+++|||++..+..      ...+++.++.                 ...+.+..  +.. 
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~-----------------~~~l~~~~--~~~-   56 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQR-----------------AWRIAVQP--GEL-   56 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB-----------------SCSEEEEE--CTT-
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeec-----------------ceeeeeec--cCC-
Confidence            489999999999999999999999999987632      1344444331                 22344432  111 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCeEeecCCCC----ccceEEEEECCCCCEEEEEec
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iel~~~  160 (170)
                                    .++.|++|.|+   |++++.++++++|+++...+...    ...+.+||+|||||.|||+..
T Consensus        57 --------------~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          57 --------------DDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             --------------CEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             --------------CCceEEEEEeccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence                          16689999996   58889999999999998766321    123468999999999999854

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.5e-19  Score=121.49  Aligned_cols=130  Identities=13%  Similarity=0.123  Sum_probs=90.5

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcc--eEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      -++++||+|.|+|+++|++||+++|||++......+...  .....+..                   +...+++.....
T Consensus         9 ~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~l~~~~~   69 (149)
T d1sqia1           9 FLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQ-------------------GKIVFVLCSALN   69 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEE-------------------TTEEEEEEEESS
T ss_pred             eeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecC-------------------CcEEEEEEeccC
Confidence            368999999999999999999999999998876443222  22223332                   245677765433


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCC--Cccc--eEEEEECCCCCEEEEEecCc
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG--GKLK--GVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~--~~~~--~~~~~~DPdG~~iel~~~~~  162 (170)
                      .+... .....  .....|+.||||.|+|+++++++|+++|+++..+|..  ...|  +.++++.|+|..++|+|+..
T Consensus        70 ~~~~~-~~~~~--~~~g~G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~  144 (149)
T d1sqia1          70 PWNKE-MGDHL--VKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN  144 (149)
T ss_dssp             TTCHH-HHHHH--HHHCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             CCCch-hhhhh--hhCCCeEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCC
Confidence            32210 00000  0112488999999999999999999999999887742  1222  35678889899999999754

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.77  E-value=3.7e-19  Score=123.24  Aligned_cols=130  Identities=17%  Similarity=0.121  Sum_probs=90.5

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCc--ceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ..+++||+|+|+|+++|++||+++|||++.........  ....+.++.+                   ...++|.....
T Consensus         5 i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~-------------------~~~i~l~~~~~   65 (163)
T d1t47a1           5 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-------------------SARFVLTSVIK   65 (163)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEESS
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC-------------------CEEEEEeccCC
Confidence            35899999999999999999999999999987543322  2233334322                   45677765433


Q ss_pred             CCCCCC--CCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCC--Cccc--eEEEEECCCCCEEEEEecC
Q 030857           89 TESDPD--FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG--GKLK--GVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        89 ~~~~~~--~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~--~~~~--~~~~~~DPdG~~iel~~~~  161 (170)
                      ......  ..++..  ....|+.|+||.|+|+++++++|+++|+++...|..  ...+  ..+++++|+|..++|+|+.
T Consensus        66 ~~~~~~~~~~~~~~--~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~  142 (163)
T d1t47a1          66 PATPWGHFLADHVA--EHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  142 (163)
T ss_dssp             CCSHHHHHHHHHHH--HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCCccccccchhhh--cCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEecc
Confidence            321000  000000  012378999999999999999999999999987743  1222  3678999999999999974

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.77  E-value=8.6e-18  Score=113.74  Aligned_cols=115  Identities=19%  Similarity=0.281  Sum_probs=77.6

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      ..++|+||.|.|+|++++++||+++|||++..+...  ..+...+..  ..                ....+.+...  .
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~--~~----------------~~~~~~~~~~--~   61 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--GRVYLKAWT--EV----------------DKFSLVLREA--D   61 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--SCEEEECTT--CC----------------BSCSEEEEEC--S
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc--Cccceeccc--cc----------------ceeecccccc--C
Confidence            357899999999999999999999999999876321  111111111  10                0122222211  1


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCeEeecCCCC-c-cceEEEEECCCCCEEEEEecC
Q 030857           90 ESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGG-K-LKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~-~-~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .               .+..|++|.+   +|+++++++|+++|+++...|... + .++.+||+|||||.|||+...
T Consensus        62 ~---------------~~~~~~~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~  123 (145)
T d1mpya1          62 E---------------PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADK  123 (145)
T ss_dssp             S---------------CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             c---------------ccceeeeeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEec
Confidence            1               1335666655   479999999999999987766432 2 246899999999999998754

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=4.8e-18  Score=117.92  Aligned_cols=134  Identities=16%  Similarity=0.050  Sum_probs=87.7

Q ss_pred             CceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEE--eeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857           10 NKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLY--FLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus        10 ~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      ...+++||+|.|+|++++++||+++|||++..+...........  .++.+                   ...+.+....
T Consensus         9 ~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~v~~~~~   69 (167)
T d1sqda1           9 KVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG-------------------DLRFLFTAPY   69 (167)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET-------------------TEEEEEEEEC
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC-------------------CeeEEEeccc
Confidence            34689999999999999999999999999998765433222222  22211                   1222222211


Q ss_pred             CCCCCCCCCCC------CCCC---------CCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCcc-ceEEEEECCC
Q 030857           88 GTESDPDFKGY------HNGN---------SEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPD  151 (170)
Q Consensus        88 ~~~~~~~~~~~------~~~~---------~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPd  151 (170)
                      ...........      ....         ....|+.||||.|+|+++++++|+++|+++..+|..... .+.++++.++
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~g  149 (167)
T d1sqda1          70 SPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYG  149 (167)
T ss_dssp             CGGGTTTCCGGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEET
T ss_pred             cccccccccccccccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccC
Confidence            11000000000      0000         011388999999999999999999999999988854332 3467899999


Q ss_pred             CCEEEEEecCc
Q 030857          152 DYWIEIFDLKT  162 (170)
Q Consensus       152 G~~iel~~~~~  162 (170)
                      +.+++|+++..
T Consensus       150 d~~~~~v~r~~  160 (167)
T d1sqda1         150 DVVLRYVSYKA  160 (167)
T ss_dssp             TEEEEEEEECC
T ss_pred             CcEEEEEecCC
Confidence            99999999864

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.76  E-value=4.3e-18  Score=119.35  Aligned_cols=116  Identities=16%  Similarity=0.180  Sum_probs=81.7

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      .++|+||+|.|+|++++++|| ++|||++..+..........+++..+..                 ...+.+...  +.
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~-----------------~~~l~~~~~--~~   62 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT-----------------VHDTALTGG--NG   62 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS-----------------SCSEEEEES--SB
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc-----------------ccceecccc--cC
Confidence            468999999999999999999 6899999887665655555666654322                 233444321  11


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEee--cCCC-C-ccceEEEEECCCCCEEEEEecC
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAK--KPDG-G-KLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~--~~~~-~-~~~~~~~~~DPdG~~iel~~~~  161 (170)
                                     .+++|++|.+.+   +..+.++|+++|+....  .|.. + ....++||+|||||.|||....
T Consensus        63 ---------------~~~~H~~f~~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~  125 (176)
T d1f1ua2          63 ---------------PRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  125 (176)
T ss_dssp             ---------------SEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             ---------------CCccceeEEeccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCC
Confidence                           267899999986   45566789999986532  2321 1 1234789999999999998754

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.74  E-value=2e-17  Score=115.38  Aligned_cols=135  Identities=14%  Similarity=0.048  Sum_probs=89.1

Q ss_pred             CCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcc--eEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857            9 CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus         9 ~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      ...++++||+|.|+|++++++||+++|||++..+.......  +....++.+                   ...+.+...
T Consensus         9 ~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~   69 (172)
T d1sp8a1           9 FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG-------------------SLSFLFTAP   69 (172)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEE
T ss_pred             CCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC-------------------CeeeEEeec
Confidence            34578999999999999999999999999999876544322  222222221                   223333221


Q ss_pred             cCCCCC--CCCCCCC----CC---CCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEE
Q 030857           87 WGTESD--PDFKGYH----NG---NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIE  156 (170)
Q Consensus        87 ~~~~~~--~~~~~~~----~~---~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~ie  156 (170)
                      ......  ....+..    ..   .....|+.||||.|+|+++++++|+++|+++..+|.....+ +.++++-|.+.+++
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~  149 (172)
T d1sp8a1          70 YAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLR  149 (172)
T ss_dssp             CCSSCCGGGCSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEE
T ss_pred             cCCCchhhhcccccCCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEE
Confidence            111100  0000000    00   00123889999999999999999999999999888543333 46788888888999


Q ss_pred             EEecCc
Q 030857          157 IFDLKT  162 (170)
Q Consensus       157 l~~~~~  162 (170)
                      |+|+..
T Consensus       150 lve~~~  155 (172)
T d1sp8a1         150 YVSYPD  155 (172)
T ss_dssp             EEECCT
T ss_pred             EEecCC
Confidence            999864

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.73  E-value=3.1e-17  Score=112.74  Aligned_cols=119  Identities=18%  Similarity=0.160  Sum_probs=78.2

Q ss_pred             CCceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecC---CcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEe
Q 030857            9 CNKRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP---EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH   85 (170)
Q Consensus         9 ~~~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~   85 (170)
                      |....++|++|.|+|++++++||+++|||++......+   .......++..+..                 ...+.+..
T Consensus         6 ~~~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~h~~a~~~   68 (156)
T d1kw3b2           6 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR-----------------HHTIALAA   68 (156)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEEC
T ss_pred             CCCCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc-----------------cceeeecc
Confidence            44568999999999999999999999999987653221   11223334443221                 12232221


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCeEeecCCCC-ccceEEEEECCCCC-EEEEEec
Q 030857           86 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDY-WIEIFDL  160 (170)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~-~iel~~~  160 (170)
                        .+              .+.+++|++|.|++   +.+++++|+++|+.+....... ....++|++||||+ .+|+.-.
T Consensus        69 --~~--------------~~~gl~Hiaf~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          69 --FP--------------IPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             --CS--------------CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             --CC--------------CCCceeEEEEECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence              11              12378999999975   5557899999998654332222 12347999999998 5888653

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.71  E-value=2.3e-16  Score=103.34  Aligned_cols=105  Identities=17%  Similarity=0.272  Sum_probs=73.3

Q ss_pred             EEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 030857           18 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   97 (170)
Q Consensus        18 ~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   97 (170)
                      .|.|+|+++|++||++ |||++.....    .+.  .+...                   ...+.+.......+      
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~--~~~~~-------------------~~~~~~~~~~~~~~------   54 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA----GWM--ILQRG-------------------DLMLEFFAHPGLDP------   54 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS----SEE--EEEET-------------------TEEEEEEECTTCCG------
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC----cee--eeecc-------------------eecccccccccccc------
Confidence            4999999999999988 9999987532    221  12211                   34455544322211      


Q ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeec-------CCCCcc-ceEEEEECCCCCEEEEEecC
Q 030857           98 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-------PDGGKL-KGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus        98 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~-------~~~~~~-~~~~~~~DPdG~~iel~~~~  161 (170)
                             .....++++.++|++++++.++++|+++...       +...++ .+.+||+|||||+|||+|..
T Consensus        55 -------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          55 -------LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             -------GGCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             -------CCCCcEEEEEECCHHHHHHHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence                   1133689999999999999999999887543       222233 36789999999999999863

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.67  E-value=9.5e-16  Score=100.33  Aligned_cols=105  Identities=11%  Similarity=0.027  Sum_probs=74.5

Q ss_pred             EEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 030857           17 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   96 (170)
Q Consensus        17 v~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   96 (170)
                      ..|.|+|+++|++||+++|||++.....    .+  .++..+                   ...+.+........     
T Consensus         9 pvL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~--~~~~~~-------------------~~~l~l~~~~~~~~-----   58 (122)
T d1jifa_           9 PVLTAVDVPANVSFWVDTLGFEKDFGDR----DF--AGVRRG-------------------DIRLHISRTEHQIV-----   58 (122)
T ss_dssp             EEEEESSHHHHHHHHHHTTCCEEEEECS----SE--EEEEET-------------------TEEEEEEECSCHHH-----
T ss_pred             EEEEcCCHHHHHHHHHhhhCCceEecCC----ce--eEeeee-------------------eeeeeeeccccccc-----
Confidence            3599999999999999999999887632    22  223321                   35666654322110     


Q ss_pred             CCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCC--------CCccceEEEEECCCCCEEEEEec
Q 030857           97 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD--------GGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        97 ~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~--------~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                               ....++.+.++|++++++++++.++.....+.        ...+++.+||+|||||+|||...
T Consensus        59 ---------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          59 ---------ADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             ---------HTTCEEEEEESCHHHHHHHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             ---------cceeEEEEeechhHHHHHHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence                     13368999999999999999999877653321        12235689999999999999753

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.65  E-value=4.7e-15  Score=96.43  Aligned_cols=109  Identities=10%  Similarity=0.059  Sum_probs=75.6

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      +.-.+..|.|+|+++|++||+++|||++..+..    .+  .++..+                   ...+.+....... 
T Consensus         3 ~t~~~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~--~~~~~~-------------------~~~l~~~~~~~~~-   56 (120)
T d1xrka_           3 LTSAVPVLTARDVAEAVEFWTDRLGFSRVFVED----DF--AGVVRD-------------------DVTLFISAVQDQV-   56 (120)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SE--EEEEET-------------------TEEEEEEECSCTT-
T ss_pred             ceeEEEEEEECCHHHHHHHHHHhhCCeEEEECC----Ce--eEEecc-------------------cceeecccccccc-
Confidence            344566799999999999999999999987632    12  222221                   3455555432221 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEee--------cCCCCccceEEEEECCCCCEEEEEe
Q 030857           92 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK--------KPDGGKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        92 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~--------~~~~~~~~~~~~~~DPdG~~iel~~  159 (170)
                                   ..+..++.+.+++++.+++.+.+.+.+...        ++....+++.+||+|||||.|||+.
T Consensus        57 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          57 -------------VPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             -------------TGGGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             -------------CCCCceEEEeeccHHHHHHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence                         124468999999999999888877655433        2323345678999999999999975

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=2.8e-15  Score=100.07  Aligned_cols=118  Identities=9%  Similarity=-0.020  Sum_probs=74.2

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcc-------eEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           16 FTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK-------FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        16 hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ++.|.|.|+++|++||+++||+++..+...++..       .....+..+                   ...+.+.....
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~-------------------~~~~~~~~~~~   70 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-------------------GSSFVVCDVSS   70 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET-------------------TEEEEEEEGGG
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEEC-------------------Ceeeecccccc
Confidence            3455556999999999999999998765433211       112222221                   23444433211


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEe
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  159 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  159 (170)
                      .....       .........+|++.|+|++++++++.++|+++..++...+++ +.++|+||+|+.|+|.|
T Consensus        71 ~~~~~-------~~~~~~~~~~l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          71 LPGFS-------TAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             STTCC-------CCCTTSCCCEEEEECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             ccccc-------cCCCCCcceEEEEeecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            11100       001112335999999999999999999999999888665554 57899999999999976

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.52  E-value=1.2e-14  Score=98.94  Aligned_cols=122  Identities=16%  Similarity=0.071  Sum_probs=82.5

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   90 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   90 (170)
                      ..+++||.++|.|++++.+||++ |||+...+....  .  ...++.                     ..+.++.+..+.
T Consensus         7 ~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~--~--~~l~~~---------------------G~i~ll~~~~~~   60 (150)
T d1cjxa1           7 LMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK--N--VHLYRQ---------------------GEINLILNNEPN   60 (150)
T ss_dssp             EEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS--S--EEEEEE---------------------TTEEEEEECCSS
T ss_pred             cCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce--E--EEEEec---------------------CcEEEEecCCCC
Confidence            35899999999999999999976 999999875422  1  222221                     113333332221


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEecCc
Q 030857           91 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  162 (170)
Q Consensus        91 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  162 (170)
                      .  ....+..  ....|++|+||+|+|+++++++++++|+++...+..........++.|+|.++.++++..
T Consensus        61 s--~~~~~~~--~hg~gv~hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          61 S--IASYFAA--EHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             S--HHHHHHH--HHSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCCS
T ss_pred             C--HhHhHHh--hCCCceEEEEEEeCCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECcCC
Confidence            1  0100110  012388999999999999999999999998877643211224678899999999998754

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.43  E-value=2.8e-13  Score=97.69  Aligned_cols=101  Identities=8%  Similarity=0.135  Sum_probs=64.4

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCC-----cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      .+++||++.|.|++++++||+++|||....+....+     ..+....+..                 +.+...+.+...
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~-----------------~~g~v~~~l~E~   70 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLAN-----------------NSENVLLPLNEP   70 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEEC-----------------SSSCCEEEEEEE
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEc-----------------CCCccceeeeee
Confidence            589999999999999999999999999887653221     1122222222                 223456666654


Q ss_pred             cCCCCCCCC-CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCC
Q 030857           87 WGTESDPDF-KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV  130 (170)
Q Consensus        87 ~~~~~~~~~-~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~  130 (170)
                      ..+....+. ..+.. .....|++||||.|+||++++++|+++|+
T Consensus        71 ~~~~~~~s~i~~FL~-~~~g~GiqHIAf~vdDI~~av~~L~arGv  114 (224)
T d1sp8a2          71 VHGTKRRSQIQTFLD-HHGGPGVQHMALASDDVLRTLREMQARSA  114 (224)
T ss_dssp             CCCSSSCCHHHHHHH-HHTSSEEEEEEEEETTHHHHHHHHHTSGG
T ss_pred             cCCCCCccHHHHHHH-hccCCCceeEEEEeCCHHHHHHHHHhccc
Confidence            333211110 00000 01123899999999999999999998754

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.35  E-value=3.3e-13  Score=95.99  Aligned_cols=106  Identities=13%  Similarity=0.242  Sum_probs=69.8

Q ss_pred             eeeeEEEEEeC--ChHHHHHHHHHhcCCEEeEeeecCCcceEEE--eeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 030857           12 RFPHFTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLY--FLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   87 (170)
Q Consensus        12 ~~l~hv~i~v~--d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   87 (170)
                      .+++||++.|+  |+++++.||+++|||+.......++....+.  .+..+                 .+...+.+....
T Consensus         4 ~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~-----------------~~~~~~~l~~~~   66 (203)
T d1cjxa2           4 KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAP-----------------DGMIRIPLNEES   66 (203)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECT-----------------TSSCEEEEEEEC
T ss_pred             CeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeecc-----------------ccccceecccCC
Confidence            47999999998  9999999999999999988765443332222  22221                 123455554432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecC
Q 030857           88 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  136 (170)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  136 (170)
                      .... +....+.. .....|++||||.|+||.+++++|+++|++++..|
T Consensus        67 ~~~~-sqi~~fl~-~~~g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          67 SKGA-GQIEEFLM-QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             TTCC-SHHHHHHH-HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCc-cHHHHHHH-hcCCCCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            2211 10000110 01123889999999999999999999999998765

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.33  E-value=2e-12  Score=91.38  Aligned_cols=106  Identities=13%  Similarity=0.195  Sum_probs=67.3

Q ss_pred             eeeEEEEEeC--ChHHHHHHHHHhcCCEEeEeeecC-----CcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEe
Q 030857           13 FPHFTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFP-----EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH   85 (170)
Q Consensus        13 ~l~hv~i~v~--d~~~s~~FY~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~   85 (170)
                      +++||++.|.  +++.++.||+++|||+.......+     ...+...-+..+                 .+...+.+..
T Consensus         6 ~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~-----------------~~~v~l~lne   68 (199)
T d1t47a2           6 AIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG-----------------TLKVKFPINE   68 (199)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECT-----------------TSCSEEEEEE
T ss_pred             eeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecccc-----------------ccccceeecc
Confidence            7999999998  999999999999999987653211     111211112211                 1234454433


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecC
Q 030857           86 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  136 (170)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  136 (170)
                      +...........+.. .....|++||||.|+||.++.++|+++|++++..|
T Consensus        69 ~~~~~~~s~i~~FL~-~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          69 PALAKKKSQIDEYLE-FYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             ECCSSSCCHHHHHHH-HHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             cCccccccchhhhhh-hcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            221111110000100 01224899999999999999999999999999877

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=2.4e-12  Score=91.73  Aligned_cols=107  Identities=12%  Similarity=0.235  Sum_probs=65.9

Q ss_pred             eeeeEEEEEeCC--hHHHHHHHHHhcCCEEeEeeecCC-----cceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEE
Q 030857           12 RFPHFTMFRIKD--PKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   84 (170)
Q Consensus        12 ~~l~hv~i~v~d--~~~s~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~   84 (170)
                      .+++||++.|.+  ++++++||+++|||.........+     ..+....+..                 +.+...+.+.
T Consensus        23 ~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s-----------------~~~~i~~~ln   85 (210)
T d1sqia2          23 EIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVAN-----------------YEESIKMPIN   85 (210)
T ss_dssp             EEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEEC-----------------TTSCCEEEEE
T ss_pred             ceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEe-----------------cCcccccccc
Confidence            469999999997  999999999999999876432111     1111111221                 1234455554


Q ss_pred             eccCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCeEeecC
Q 030857           85 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  136 (170)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  136 (170)
                      .+...........+.. .....|++||||.|+||.++.++|+++|+++...|
T Consensus        86 e~~~~~~~sqi~~fl~-~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P  136 (210)
T d1sqia2          86 EPAPGRKKSQIQEYVD-YNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP  136 (210)
T ss_dssp             ECC-----CHHHHHHH-HHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCC
T ss_pred             ccCCCCcccHHHHHHh-hcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            4321111000000100 01123899999999999999999999999999776

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.25  E-value=3.5e-10  Score=75.06  Aligned_cols=125  Identities=12%  Similarity=-0.036  Sum_probs=72.4

Q ss_pred             EEEeC-ChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 030857           18 MFRIK-DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   96 (170)
Q Consensus        18 ~i~v~-d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   96 (170)
                      -|... |.++|++||+++||+++.......+..........      ....+.-..+ .-++..+.+........     
T Consensus         7 yl~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~------~~~~i~ha~l-~i~g~~~~~~d~~~~~~-----   74 (137)
T d1u6la_           7 YLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPAD------WKDKIMHARL-VVGSFALMASDNHPAYP-----   74 (137)
T ss_dssp             EEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCS------SCCCEEEEEE-EETTEEEEEEECCTTSC-----
T ss_pred             EEEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCC------CCCeEEEEEE-EEcCeEEEecccCCccc-----
Confidence            34555 99999999999999999887654432211000000      0000000000 00122333322111110     


Q ss_pred             CCCCCCCCCCCceEEEEEeCCHH--HHHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857           97 GYHNGNSEPRGFGHIGITVDDVY--KACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        97 ~~~~~~~~~~g~~hl~f~v~di~--~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                       .     ....-.++++.+++.+  +.+.++.++|.++..++.+.+++ +..+|+||+|+.|+|...
T Consensus        75 -~-----~~~~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          75 -Y-----EGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             -C-----CCCCSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             -c-----cCCCcEEEEEEcCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence             1     1113358888888654  45777788999999988776666 468899999999999754

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.23  E-value=1.7e-11  Score=88.47  Aligned_cols=106  Identities=8%  Similarity=0.164  Sum_probs=62.7

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   91 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   91 (170)
                      .+++||++.|.|++++.+||+++||+.........+.......+..            .....+.+...+.+.....+..
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s------------~v~~s~~g~v~~~l~E~~~~~~   88 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNS------------AVLASNDEMVLLPINEPVHGTK   88 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEE------------EEEECTTSCSEEEEEEECCC--
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEee------------ccccCCCcccceeEEeecCCCC
Confidence            5699999999999999999999999999886542221111111110            0111122355667765433321


Q ss_pred             C-CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCC
Q 030857           92 D-PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV  130 (170)
Q Consensus        92 ~-~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~  130 (170)
                      . .....+.. .....|++||||.|+||.++.++|+++|+
T Consensus        89 ~~sqi~~FL~-~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          89 RKSQIQTYLE-HNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             -CCHHHHHHH-HHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             CcchHHHHHh-hccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence            1 10000000 01123899999999999999999999744

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.90  E-value=1.1e-07  Score=62.43  Aligned_cols=113  Identities=9%  Similarity=0.045  Sum_probs=68.0

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeEeee-------cCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           16 FTMFRIKDPKVSLDFYSRVLGMSLLKRLD-------FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        16 hv~i~v~d~~~s~~FY~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ++.+.-.|.+++++||+++||........       .++..+..+-+..+                   +..+.+.....
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~-------------------~~~i~~~d~~~   69 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG-------------------DQSVHCIDSHV   69 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEEEEESS
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC-------------------CEEEEEecCCC
Confidence            33444458999999999999987655432       11223333434332                   34555543321


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHH--HHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEE
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA--CERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  158 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~--~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  158 (170)
                      ...      ...     ....++++.+++.++.  +.+..++|.++..++.+.+++ +...|+||.|+.|.|.
T Consensus        70 ~~~------~~~-----~~~~s~~l~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          70 RHA------FDF-----TPAFSFFVDCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             CCS------CCC-----CTTEEEEEECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEE
T ss_pred             CCC------CCC-----CCceEEEEEeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEE
Confidence            111      111     1235788888764443  444556788888877665554 4678999999999985

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.46  E-value=5.4e-06  Score=53.80  Aligned_cols=109  Identities=7%  Similarity=-0.017  Sum_probs=63.8

Q ss_pred             EEEEeC-ChHHHHHHHHHhcCCEEeEe-eec------CCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           17 TMFRIK-DPKVSLDFYSRVLGMSLLKR-LDF------PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        17 v~i~v~-d~~~s~~FY~~~lG~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      .-|.+. |.+++++||+++||-..+.. ...      .++.+..+-+..+                   +..+.+.....
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~-------------------g~~~~~~d~~~   68 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN-------------------GQVFMAIDANS   68 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET-------------------TEEEEEEC---
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEEC-------------------CEEEEeecCCC
Confidence            456666 99999999999997544432 221      1223344444432                   34454432211


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCeEeecCCCCccc-eEEEEECCCCCEEEEEec
Q 030857           89 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  160 (170)
                      .        ..       .-.++++.+++.++   ++++|. +|.++..++...+++ +...|+||.|+.|.|..+
T Consensus        69 ~--------~~-------~~~s~~v~~~~~~e~~~~~~~L~-~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          69 G--------TE-------LPISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             -------------------CCCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             C--------CC-------CCEEEEeccCCHHHHHHHHHHhc-cCCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            1        00       01357788887555   455554 566888776555554 356799999999999653

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.19  E-value=0.0074  Score=39.75  Aligned_cols=43  Identities=12%  Similarity=-0.018  Sum_probs=31.2

Q ss_pred             eEEEEEeCC---HHHHHHHHHhcCCeEeecCCCCccceEEEEECCCCCEEEEEec
Q 030857          109 GHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  160 (170)
Q Consensus       109 ~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  160 (170)
                      .+|++.++|   ++.++++|.+.|- +.     .++|   .++|+-|..|.|+.+
T Consensus        74 ~sl~l~~d~~eE~d~~f~~LsegG~-~~-----~~~G---~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          74 FSFQVATDDQAETDRLWNAIVDNGG-EE-----SACG---WCRDKWGISWQITPR  119 (156)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTC-EE-----CSTT---EEECTTSCEEEEEEH
T ss_pred             eEEEEecCCHHHHHHHHHHHhccCC-CC-----CCCe---EEECCCCCEEEeChH
Confidence            588999986   6667788877662 22     1232   489999999999965

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=96.06  E-value=0.016  Score=36.73  Aligned_cols=57  Identities=16%  Similarity=0.139  Sum_probs=41.1

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      ...++|+++.|.|+++..+.+++ .|.++..........+...|+..++                  +..+||++.
T Consensus        91 ~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPd------------------G~~iEl~e~  147 (149)
T d1ss4a_          91 ALGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVE------------------GILIGLAEE  147 (149)
T ss_dssp             SBEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGG------------------GCEEEEEEE
T ss_pred             CcceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCC------------------CCEEEEEEc
Confidence            35789999999999999999977 7998865433223344556666544                  578998753

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=95.69  E-value=0.043  Score=32.90  Aligned_cols=53  Identities=26%  Similarity=0.494  Sum_probs=41.7

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccceEEEEECCCCCEEEEEecCcc
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  163 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  163 (170)
                      ++.|+.+.|+|+++..+...+ .|.++......    ...|..++++..+.+.+....
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~   56 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN----AFAVMRDNDGFILTLMKGKEV   56 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT----TEEEEECTTCCEEEEEECSSC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC----cceeeeecceeeeeeeeeecc
Confidence            678999999999999999887 69988765422    236677888999998876543

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.37  E-value=0.23  Score=31.96  Aligned_cols=58  Identities=3%  Similarity=-0.102  Sum_probs=40.7

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   89 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   89 (170)
                      .+.|+++.|.|++++.+...+ .|.++............++++..-                  +...++|+...+.
T Consensus       104 G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~------------------gd~~~~~v~r~~~  161 (167)
T d1sqda1         104 GVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLY------------------GDVVLRYVSYKAE  161 (167)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEE------------------TTEEEEEEEECCC
T ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEcc------------------CCcEEEEEecCCC
Confidence            789999999999999999977 699988764322334444444321                  2468888876443

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=92.71  E-value=0.18  Score=32.44  Aligned_cols=56  Identities=9%  Similarity=0.249  Sum_probs=38.2

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC--CccceEEEEECCCCCEEEEEecC
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~--~~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      .++.|++|.|.|++++.+..+. .|.+.......  .......++....+..++|.+..
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~   64 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVI   64 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEES
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccC
Confidence            4789999999999999999986 69988753321  11122334344556677777643

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.30  E-value=0.15  Score=32.19  Aligned_cols=53  Identities=13%  Similarity=0.120  Sum_probs=34.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC--CccceEEEEECCCCCEEEEEe
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFD  159 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~--~~~~~~~~~~DPdG~~iel~~  159 (170)
                      +++|++|.|.|++++.+...+ .|.+.......  +......++...++..++|.+
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   66 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCS   66 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEe
Confidence            789999999999999999964 69988654321  211222232334455666655

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=91.73  E-value=0.36  Score=31.32  Aligned_cols=58  Identities=9%  Similarity=-0.112  Sum_probs=40.7

Q ss_pred             eeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           12 RFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        12 ~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      ..+.|+++.|.|++++.+-.++ .|.++.........++.++++...                  +...++|++..+
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~------------------g~~~~~lve~~~  155 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELY------------------GDVVLRYVSYPD  155 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEE------------------TTEEEEEEECCT
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECC------------------CCcEEEEEecCC
Confidence            4789999999999999999977 799987764322234555555432                  245788887543

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=90.51  E-value=1.5  Score=28.97  Aligned_cols=34  Identities=6%  Similarity=-0.075  Sum_probs=28.9

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeee
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLD   44 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~   44 (170)
                      .+..+|++++|.+.+.+.+|-+..+.+...-...
T Consensus        41 ~~~~DHialR~n~~~~A~~w~~~l~~~G~llSen   74 (190)
T d1k4na_          41 PLTADHISLRCHQNATAERWRRGFEQCGELLSEN   74 (190)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEE
T ss_pred             hccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcC
Confidence            3678999999999999999999999887765533

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=89.76  E-value=0.43  Score=29.32  Aligned_cols=30  Identities=23%  Similarity=0.262  Sum_probs=26.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHhc-CCeEeecC
Q 030857          107 GFGHIGITVDDVYKACERFERL-GVEFAKKP  136 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~~-G~~~~~~~  136 (170)
                      ++.|+++.|+|+++..+..++. |.++...+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~   34 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTT   34 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecC
Confidence            6789999999999999999995 99887654

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=89.20  E-value=0.68  Score=28.32  Aligned_cols=56  Identities=7%  Similarity=0.102  Sum_probs=36.6

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecCCCCccc-eEEEEE-----CCCCCEEEEEecC
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLK-GVAFIK-----DPDDYWIEIFDLK  161 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~-~~~~~~-----DPdG~~iel~~~~  161 (170)
                      .+++|+++.|+|++++.+..++ .|.+..........+ ...+..     ...+..+|+++..
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~   68 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPL   68 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEES
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhh
Confidence            3789999999999999999987 588765433211111 122222     2456788888754

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=87.05  E-value=1.1  Score=27.51  Aligned_cols=56  Identities=5%  Similarity=-0.031  Sum_probs=32.9

Q ss_pred             eeeEEEEEeCChHHHHHHHHH--hcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEeccC
Q 030857           13 FPHFTMFRIKDPKVSLDFYSR--VLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG   88 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~--~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~   88 (170)
                      .++|+++.|.|.+.-.+|...  -.|........... . ...++..++                  +..+||+...+
T Consensus        77 ~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~-~-~~~yf~DPd------------------G~~iEl~~~~~  134 (144)
T d1zswa1          77 AITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYAN-R-PALQFEDAE------------------GLRLVLLVSNG  134 (144)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETT-E-EEEEEECTT------------------CCEEEEEECTT
T ss_pred             ceeEEEEecCCchhHHHHhhhhhccceeeeCccccCC-e-EEEEEECCC------------------CCEEEEEEeCC
Confidence            589999999996554444432  35776644322222 2 333444333                  57999987543

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.87  E-value=1.2  Score=28.46  Aligned_cols=56  Identities=20%  Similarity=0.135  Sum_probs=40.2

Q ss_pred             ceeeeEEEEEeCChHHHHHHHHHhcCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           11 KRFPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        11 ~~~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      ...+.|+++.|.|+++..+.+++ .|.+....... ......+|+..++                  +..+||++.
T Consensus       114 ~~g~~h~~~~~~d~~~~~~~l~~-~Gv~~~~~p~~-g~~~~~~f~~DPd------------------G~~IElvq~  169 (176)
T d1qipa_         114 PRGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDD-GKMKGLAFIQDPD------------------GYWIEILNP  169 (176)
T ss_dssp             SCBEEEEEEECSCHHHHHHHHHH-TTCEEEECTTS-SSSTTCEEEECTT------------------CCEEEEECT
T ss_pred             ccceeEEEeeHHHHHHHHHHHHH-CCCEEeeCCcc-CCceEEEEEECCC------------------CCEEEEEeC
Confidence            35889999999999999999986 69988875321 1122345555443                  579999864

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=86.51  E-value=0.61  Score=25.79  Aligned_cols=28  Identities=14%  Similarity=0.190  Sum_probs=24.7

Q ss_pred             ceEEEEEeCCHHHHHHHHHhcCCeEeec
Q 030857          108 FGHIGITVDDVYKACERFERLGVEFAKK  135 (170)
Q Consensus       108 ~~hl~f~v~di~~~~~~l~~~G~~~~~~  135 (170)
                      ...+.|.|+|.+.+.+.|+++|+++...
T Consensus        38 ~~~~vl~vdd~~~a~~~L~~~G~~vl~~   65 (71)
T d2f06a1          38 VANVVIRPSNMDKCIEVLKEKKVDLLAA   65 (71)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCEEECH
T ss_pred             cEEEEEEECCHHHHHHHHHHCCCEEEch
Confidence            3578999999999999999999998754

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.89  E-value=0.84  Score=29.63  Aligned_cols=29  Identities=21%  Similarity=0.339  Sum_probs=25.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHhcCCeEeec
Q 030857          107 GFGHIGITVDDVYKACERFERLGVEFAKK  135 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~~G~~~~~~  135 (170)
                      .+.|+++.|.|+++..+..+..|.++...
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~d~   33 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVSED   33 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEEEE
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEEEE
Confidence            56899999999999998888889998754

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=83.47  E-value=1.7  Score=26.01  Aligned_cols=54  Identities=20%  Similarity=0.335  Sum_probs=34.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCeEeecCCC-C-ccceEEEEECCCCCEEEEEecC
Q 030857          107 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-G-KLKGVAFIKDPDDYWIEIFDLK  161 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~-~-~~~~~~~~~DPdG~~iel~~~~  161 (170)
                      ++.|+.+.|.|+++..+...+ .|.++...... . ......++ ...+..+++.+..
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   60 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFF-LIGDIWVAIMQGE   60 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEE-EETTEEEEEEECC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEE-ecCCEEEeecccc
Confidence            679999999999999988886 58887754321 1 11122333 2345566665543

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=82.73  E-value=1.8  Score=26.36  Aligned_cols=30  Identities=23%  Similarity=0.264  Sum_probs=26.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHhc-CCeEeecC
Q 030857          107 GFGHIGITVDDVYKACERFERL-GVEFAKKP  136 (170)
Q Consensus       107 g~~hl~f~v~di~~~~~~l~~~-G~~~~~~~  136 (170)
                      .+.|+++.|+|+++..+...+. |.++....
T Consensus         4 ~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~   34 (132)
T d1kw3b1           4 RLGYLGFAVKDVPAWDHFLTKSVGLMAAGSA   34 (132)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHHhCCceeccc
Confidence            6789999999999999999985 99887654

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=82.63  E-value=0.73  Score=29.29  Aligned_cols=30  Identities=30%  Similarity=0.433  Sum_probs=26.1

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeec
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKK  135 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~  135 (170)
                      +|++|+++.|.|+++..+-.++ .|.++...
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~   39 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDI   39 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeE
Confidence            5899999999999999999886 69987643

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=81.64  E-value=2.5  Score=25.66  Aligned_cols=31  Identities=19%  Similarity=0.434  Sum_probs=26.6

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCeEeecC
Q 030857          106 RGFGHIGITVDDVYKACERFER-LGVEFAKKP  136 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~  136 (170)
                      .+++|+++.|.|+++..+...+ .|.++....
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~   34 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARW   34 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEE
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEe
Confidence            3789999999999999999987 699887554

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=80.68  E-value=1.9  Score=26.50  Aligned_cols=31  Identities=19%  Similarity=0.173  Sum_probs=23.3

Q ss_pred             eeeEEEEEeCChHHHHHHHHHhcCCEEeEeeec
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRVLGMSLLKRLDF   45 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~lG~~~~~~~~~   45 (170)
                      +..++.+.+.|. .+.+||++ +||+...+...
T Consensus        93 g~~~i~l~~~n~-~a~~fY~k-~GF~~~g~~~~  123 (137)
T d2g3aa1          93 GCMGAYIDTMNP-DALRTYER-YGFTKIGSLGP  123 (137)
T ss_dssp             TCCEEEEEESCH-HHHHHHHH-HTCEEEEEECC
T ss_pred             CCceEEEecccH-hhHHHHHh-CCCEEEEEECC
Confidence            345677777775 47999977 79999987653

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=80.49  E-value=1.5  Score=28.09  Aligned_cols=54  Identities=15%  Similarity=0.156  Sum_probs=33.9

Q ss_pred             eeeEEEEEeCChHHHHHHHHHh--cCCEEeEeeecCCcceEEEeeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 030857           13 FPHFTMFRIKDPKVSLDFYSRV--LGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   86 (170)
Q Consensus        13 ~l~hv~i~v~d~~~s~~FY~~~--lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   86 (170)
                      .++|+++.|.|.+...+++..+  .|......... .. +...|+..++                  +..+|++..
T Consensus        75 ~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~~-~~-~~s~Yf~DPd------------------G~~iEl~t~  130 (170)
T d1zswa2          75 SIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDR-FY-FKSLYFRESN------------------GILFEIATD  130 (170)
T ss_dssp             CEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEEC-SS-EEEEEEECTT------------------CCEEEEEEE
T ss_pred             ccceEEEEeCChHHHHHHHHHHHhcCCCccccccC-CC-EEEEEEECCC------------------CcEEEEEEC
Confidence            5899999999987777777654  46665433222 21 2334455443                  578999763

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=80.01  E-value=0.35  Score=30.90  Aligned_cols=31  Identities=19%  Similarity=0.156  Sum_probs=27.4

Q ss_pred             CCceEEEEEeCCHHHHHHHHHhcCCeEeecC
Q 030857          106 RGFGHIGITVDDVYKACERFERLGVEFAKKP  136 (170)
Q Consensus       106 ~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  136 (170)
                      .|+.||.|.|+|++++.+.+.+.|.+.....
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~lGF~~~~~~   38 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEIMGFTKVATH   38 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHHTTCEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHHhCCEEEecc
Confidence            4889999999999999999999999887654