Citrus Sinensis ID: 030911

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MSSKKPHHEAEQEAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEATGSVEVKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIREVK
Secondary Structure (PSIPRED)
ccccccccccccccEEEEcccEEEEEEccccEEEEcccccccccccccccccEEEEEEEEEEEEEEEEcccccEEEEEEEEEEcccccccccccEEEEEEEcccccEEEEEEcccccccccEEEEcccEEEEEcccccccEEEEEEEEEEccccccEEEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEcccccEEEEEcccEEEEEccccccEEccccccccHHEHEEEEEEEEEEEEEcccccEEEEEEEEEEEccccccccccEEEEEEEcccccEEEEEEEcccccccccEEcccccEEEEEccccccEEEEEEEEEEccccccEEEEEEEEEEEcc
Coil and Loop (DISEMBL)
MSSKKPHHEAEQEAMEWNAERteatikprglnivwgndprywhlpekrsndpvELVQVCWLEAtgsvevkrgkkyqIGFKISLkadafgwsgcpvFMMAKlgkkgkytwrkmkpldhlgkeaaeipdekfeilvpeqgenqLYFGLYEVwngkwkgglLIHHAFIREVK
Flexible Loop (DISEMBL)
msskkphheaeQEAMEWNAERteatikprglnivWGNDPRYWHLPEKRSNDPVELVQVCWLEatgsvevkrgkkyQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIREVK
Low Complexity Region (SEG)
MSSKKPHHEAEQEAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEATGSVEVKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIREVK
Disordered region (IsUnstruct)
************************TIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEATGSVEVKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIR***
Disordered Region (DISOPRED)
****************WNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEATGSVEVKRGKKYQIGFKISLKADAFGWSGCPVFMMAKL********************AAEIPDEKFEILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIREVK
Disordered Region (DISEMBL)
***************EWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEATGSVEVKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIREVK
Disordered Region (DISPRO)
***********QEAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEATGSVEVKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIREVK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSKKPxxxxxxxxxxxxxxxxxxxxxPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEATGSVEVKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIREVK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	169	2.2.26 [Sep-21-2011]
Q9SA16	180	Protein PHLOEM PROTEIN 2-	yes	no	0.988	0.927	0.502	2e-39
O81865	246	Protein PHLOEM PROTEIN 2-	no	no	0.798	0.548	0.319	4e-07
Q9C8U9	165	Uncharacterized protein P	no	no	0.810	0.830	0.281	4e-06
Q949S5	257	F-box protein PP2-B11 OS=	no	no	0.248	0.163	0.488	3e-05
Q3E6P4	320	F-box protein At2g02240 O	no	no	0.786	0.415	0.25	9e-05
Q9C5Q9	411	Protein PHLOEM PROTEIN 2-	no	no	0.786	0.323	0.262	0.0004
O81025	463	Putative protein PHLOEM P	no	no	0.828	0.302	0.267	0.0006
Q9FLU7	251	Putative F-box protein PP	no	no	0.822	0.553	0.245	0.0007
Q9FHE9	354	Protein PHLOEM PROTEIN 2-	no	no	0.816	0.389	0.238	0.0007

>sp|Q9SA16|P2A09_ARATH Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana GN=PP2A9 PE=2 SV=1

 Score =  161 bits (407), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/181 (50%), Positives = 107/181 (59%), Gaps = 14/181 (7%)

Query: 1   MSSKKPHHEAEQEAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCW 60
           MSS+K  H      ME +  R     +P GLN VWG D RYW +P K    P EL  V W
Sbjct: 1   MSSQKSSHHKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWVIP-KEPRMPAELKMVSW 59

Query: 61  LEATGSVE-VKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHL- 118
           LE TGS + ++ GK Y+IGFKIS K DA GW   PVFM AK+GKKGK  W+++K +    
Sbjct: 60  LEVTGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNF 119

Query: 119 -----GKEAAEIPDEK---FEILVPEQGENQ---LYFGLYEVWNGKWKGGLLIHHAFIRE 167
                G E   IPDE    FEILV     NQ   L FGLYEVW G+WK GLLIH AF++E
Sbjct: 120 GILKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQE 179

Query: 168 V 168
           V
Sbjct: 180 V 180

Arabidopsis thaliana (taxid: 3702)

>sp|O81865|P2A01_ARATH Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1

 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 12/147 (8%)

Query: 29  RGLNIVWGNDPRYWH-LPEKRS-NDPVELV---QVCWLEATGSVEVKR---GKKYQIGFK 80
           + L+I W +D  YW    EK S N+ VE V    VCWL+ TG  + +    G  Y++ FK
Sbjct: 100 KNLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFK 159

Query: 81  ISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPEQ-GE 139
           + L+  A+GW   PV +   L    +    K   L  L +   +  D +    VPE+   
Sbjct: 160 VKLEDPAYGWD-TPVNLKLVLPNGKEKPQEKKVSLRELPR--YKWVDVRVGEFVPEKSAA 216

Query: 140 NQLYFGLYEVWNGKWKGGLLIHHAFIR 166
            ++ F +YE   G WK GL +    IR
Sbjct: 217 GEITFSMYEHAAGVWKKGLSLKGVAIR 243

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8U9|P2A04_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana GN=PP2A4 PE=4 SV=1

 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 16/153 (10%)

Query: 26  IKPRGLNIVWGNDPRYWH-------LPEKRSNDPVELVQVCWLEATG---SVEVKRGKKY 75
           I  R L+I W +   YW        +  ++  D   L  VCWL+  G   + E+     Y
Sbjct: 14  IYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLETTY 73

Query: 76  QIGFKISLKADAFGWSGCPVFMMAKL--GKKGKYTWRKMKPLDHLGKEAAEIPDEKFEIL 133
           ++ + + L+  A GW+  PV +   L  GKK     R M   +H+GK   +I   +F + 
Sbjct: 74  EVVYVVKLEDTASGWN-IPVNLKLTLPDGKKRPQE-RSMCLKEHIGKRWIDISAGEF-VT 130

Query: 134 VPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIR 166
            P+    ++ F +YE  +  WK GL +    IR
Sbjct: 131 SPDNA-GEISFSMYETKSCCWKRGLFVKCVEIR 162

Arabidopsis thaliana (taxid: 3702)

>sp|Q949S5|P2B11_ARATH F-box protein PP2-B11 OS=Arabidopsis thaliana GN=PP2B11 PE=1 SV=1

 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 3/45 (6%)

Query: 29  RGLNIVWGNDPRYWH---LPEKRSNDPVELVQVCWLEATGSVEVK 70
           R LNIVWG++ RYWH   LP  R  +  EL+ V WLE TG + + 
Sbjct: 99  RALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINIT 143

Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E6P4|FB95_ARATH F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 61/160 (38%), Gaps = 27/160 (16%)

Query: 33  IVWGNDPRYWH---LPEKRSNDPVELVQVCWLEATGSVEVKR---GKKYQIGFKISLKAD 86
           I WG+ P YW    +PE R N   EL+ VCW E  G    +    G +Y        K  
Sbjct: 163 ITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDR 222

Query: 87  AFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPEQGE------- 139
             G    PV     LG  G+ + ++   +  +G        E  ++  P+Q E       
Sbjct: 223 CPGLGHLPV--EVGLGLVGQESSKRF--IYFIGPRDRRGRRETRDVTKPDQREDGWMEAE 278

Query: 140 ----------NQLYFGLYEVWNGKWKGGLLIHHAFIREVK 169
                     +++ F + E+ +  WK GL+I     R  K
Sbjct: 279 LGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRPTK 318

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5 PE=2 SV=1

 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 23/156 (14%)

Query: 26  IKPRGLNIVWGNDPRYWH---LPEKRSNDPVE----LVQVCWLEATGSVEVKR---GKKY 75
           I  R L+I W  D  +W    LP + SN+ V     L    WL+  G  + +      +Y
Sbjct: 261 IDARDLSIAWSEDSNHWTWLPLPNQNSNESVMEIAFLKSASWLDVAGKFDTRYLTPRTRY 320

Query: 76  QIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRK-----MKPLDHLGKEAAEIPDEKF 130
           ++ F + L+   F W       + KL      TW K     +   D++  +  +IP  +F
Sbjct: 321 EVVFVVKLEY-TFEWET-----LVKLKLDLPNTWEKPQEQSVDMFDYISDQWLDIPVGEF 374

Query: 131 EILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIR 166
                  GE  + F +YE     WK GL +    IR
Sbjct: 375 TTSKKNVGE--ISFAMYEHECQLWKSGLFVKGVTIR 408

Arabidopsis thaliana (taxid: 3702)

>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana GN=PP2A3 PE=4 SV=1

 Score = 43.5 bits (101), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 17/157 (10%)

Query: 26  IKPRGLNIVWGNDPRYW---HLPEKRSNDP----VELVQVCWLEATGSVEVKRG---KKY 75
           I  R LNI W +   +W   +L    S++      EL+ V W + +GS++         Y
Sbjct: 309 ICARDLNIEWSHSEEHWKWVNLDHNISSNTFVEVAELLGVYWFDVSGSLDTTEMAPWTHY 368

Query: 76  QIGFKISLKADAFGWSGCP----VFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFE 131
           ++ F ++LK  AF W+        ++ ++ G  G    R +    H+GK    I   +F 
Sbjct: 369 EVLFVVNLKDSAFKWNAAVKMNLFYINSRPGGPGTQE-RAVDMRQHIGKGWVTIHAGEF- 426

Query: 132 ILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIREV 168
           I  PE     + F + EV +G  +GGL++    IR +
Sbjct: 427 ITTPE-NVGLIGFRMSEVDSGDNRGGLIVKGVLIRPI 462

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLU7|P2B12_ARATH Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12 PE=4 SV=1

 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 12/151 (7%)

Query: 26  IKPRGLNIVWGNDPRYW---HLPEKRSNDPVELVQVCWLEATGSVE---VKRGKKYQ--I 77
           +  R L+IVW + P +W    +P+ R  +   L+ VCW E  G +    + +   Y   +
Sbjct: 98  LSARKLDIVWVDSPEFWIWVSIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYL 157

Query: 78  GFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRK--MKPLDHLGKEAAEIPDEKFEILVP 135
            FK   +  +FG+   P+ +  +  +   Y  R+  +K      +E   +  E  E  V 
Sbjct: 158 VFK-EQEMGSFGFESLPLEVSFRSTRTEVYNNRRVFLKSGTQESREDGWLEIELGEYYVG 216

Query: 136 EQGENQLYFGLYEVWNGKWKGGLLIHHAFIR 166
              E ++   + E   G WKGG+++    IR
Sbjct: 217 FDDE-EIEMSVLETREGGWKGGIIVQGIEIR 246

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 17/155 (10%)

Query: 26  IKPRGLNIVWGNDPRYW------HLPEKRSNDPVELVQV-CWLEATGSVEVKR---GKKY 75
           +  R L I   ++P  W        P K   +   ++     ++ +G    ++   GKKY
Sbjct: 200 VPARRLTIAHSDNPEKWTWSAIYDRPHKADIEIATMINTHALIKISGDFHTRKLIPGKKY 259

Query: 76  QIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPL---DHLGKEAAEIPDEKFEI 132
           ++ F +SL   + GW    V +  K+    +    K K L   +++G+   +IP   FE 
Sbjct: 260 EVVFIVSLDDTSLGWKN-EVTLTLKVVMSDEAANVKAKKLCLDEYIGENWVDIPVGDFE- 317

Query: 133 LVPEQGEN-QLYFGLYEVWNGKWKGGLLIHHAFIR 166
             P++ E+ +++F +Y++ N + K GL++    IR
Sbjct: 318 -APQEKEDAKIFFSMYQLLNTERKSGLVVKGFAIR 351

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
224134394	177	predicted protein [Populus trichocarpa]	0.970	0.926	0.540	4e-45
225423690	179	PREDICTED: protein PHLOEM PROTEIN 2-LIKE	0.994	0.938	0.477	2e-43
297737972	177	unnamed protein product [Vitis vinifera]	1.0	0.954	0.462	4e-41
261876231	177	phloem protein 2 [Malus x domestica]	0.976	0.932	0.514	9e-40
147802750	366	hypothetical protein VITISV_030744 [Viti	0.857	0.396	0.486	2e-38
224115452	172	predicted protein [Populus trichocarpa]	0.982	0.965	0.508	7e-38
15221633	180	protein PHLOEM protein 2-LIKE A9 [Arabid	0.988	0.927	0.502	1e-37
297737973	167	unnamed protein product [Vitis vinifera]	0.869	0.880	0.483	2e-36
297849338	185	hypothetical protein ARALYDRAFT_312058 [	0.946	0.864	0.505	4e-36
359472745	152	PREDICTED: protein PHLOEM PROTEIN 2-LIKE	0.852	0.947	0.476	1e-35

>gi|224134394|ref|XP_002321809.1| predicted protein [Populus trichocarpa] gi|222868805|gb|EEF05936.1| predicted protein [Populus trichocarpa]

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 93/172 (54%), Positives = 123/172 (71%), Gaps = 8/172 (4%)

Query: 2   SSKKPHHEAEQEAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSND--PVELVQVC 59
           SS KPH+EA+   ++++ E+   T KPRG +I+WGND RYW+LP++ S+D  P ELVQVC
Sbjct: 3   SSNKPHYEADTNKVQYDGEKNRWTFKPRGFSIIWGNDRRYWNLPDQSSSDETPAELVQVC 62

Query: 60  WLEATGSVE--VKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDH 117
           WLE TG+ +  +K GK Y+I F++S+K DAFGW+GCPVFMMAKLGKKG+Y W K+   D 
Sbjct: 63  WLELTGTTKDPLKEGK-YKIKFEVSMKKDAFGWNGCPVFMMAKLGKKGRYRWSKVDLSDV 121

Query: 118 LGKEAAEIPDEKFEILVPE-QGENQLYFGLYEVWNGKWKGGLLIHHAFIREV 168
              + +   D  F I V +   +N+LYFGLYEVW GKWKGGL IH A + +V
Sbjct: 122 STDKKSVTSD--FVIDVSKGTDDNKLYFGLYEVWTGKWKGGLQIHQAIVEKV 171

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423690|ref|XP_002277133.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Vitis vinifera] gi|297737974|emb|CBI27175.3| unnamed protein product [Vitis vinifera]

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/176 (47%), Positives = 117/176 (66%), Gaps = 8/176 (4%)

Query: 1   MSSKKPHHEAEQEA-MEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVC 59
           MSS  PHH+AE+   ++    +  AT  PR LN++WG DPRYW +PEK S  P EL+QVC
Sbjct: 1   MSSTTPHHDAEEPPQLQSKDGKLMATFNPRQLNVIWGRDPRYWKMPEKNSGGPAELLQVC 60

Query: 60  WLEATGSVEVKR---GKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLD 116
           WLE +GSV ++    G K++I F++S K+DAFGW+ CPV++MAK GKKGKYTW K+    
Sbjct: 61  WLEVSGSVPIRSAPIGTKFKITFQVSFKSDAFGWNNCPVYVMAKFGKKGKYTWTKISLRT 120

Query: 117 HLGKEAAEIPDEKFEILVPEQG----ENQLYFGLYEVWNGKWKGGLLIHHAFIREV 168
              +    +P +  EI+  E       + +YFGLYEVW+GKWKGGL +H+A + ++
Sbjct: 121 DNSQPTNILPPDGLEIVTKEATTANVNDTIYFGLYEVWSGKWKGGLELHNAMVEQI 176

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737972|emb|CBI27173.3| unnamed protein product [Vitis vinifera]

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 6/175 (3%)

Query: 1   MSSKKPHHEAEQEA-MEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVC 59
           MSS  PHH+AE    ++    +  AT  PR LN++WG + RYW +PEK S  P EL+QVC
Sbjct: 1   MSSTAPHHDAEDPPQLQSKDGKLMATFNPRQLNVIWGGNLRYWKMPEKNSGSPAELLQVC 60

Query: 60  WLEATGSVEVKR---GKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLD 116
           WLE +GSV ++    G K++I F++S K+DAFGW+ CPV++MAK GKKGKY W K+    
Sbjct: 61  WLEVSGSVPIRSASIGTKFRITFQVSFKSDAFGWNNCPVYVMAKFGKKGKYAWTKISLRT 120

Query: 117 HLGKEAAEIPDEKFEILVPE--QGENQLYFGLYEVWNGKWKGGLLIHHAFIREVK 169
              +    +P E  EI+  +     + +YFGLYEVW+GKWKGGL +H+A + ++ 
Sbjct: 121 DYSQPTNILPPEGLEIVTKDAPNVNDTIYFGLYEVWSGKWKGGLELHNATVEQMN 175

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|261876231|emb|CAZ15549.1| phloem protein 2 [Malus x domestica]

 Score =  168 bits (425), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 90/175 (51%), Positives = 113/175 (64%), Gaps = 10/175 (5%)

Query: 3   SKKPHHEAEQEAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSND----PVELVQV 58
           + KPH +AEQ+  E   E  +   +PRGLNIVWGND RYW LP+K+S D    P EL+QV
Sbjct: 4   TTKPHFQAEQDD-EVKQEGNKYIFRPRGLNIVWGNDERYWKLPKKQSKDEPTEPAELIQV 62

Query: 59  CWLEATGSVEVKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHL 118
            WLE TGS  +   KKY+I F + L  DAFGW     F+MAK+GKKGKYTW K+K     
Sbjct: 63  SWLEVTGSYSLSTAKKYEISFDVELAPDAFGWRDIQAFLMAKVGKKGKYTWTKVKVAAQD 122

Query: 119 GKEAA-EIPDEK---FEILVPEQG-ENQLYFGLYEVWNGKWKGGLLIHHAFIREV 168
            K    +IPD+     +I VP    ++ +YFGLYEVW+GKWKGGL IH A ++EV
Sbjct: 123 PKVGKFKIPDDNGPPMKIEVPSNAPDSTVYFGLYEVWSGKWKGGLKIHQASVKEV 177

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147802750|emb|CAN72995.1| hypothetical protein VITISV_030744 [Vitis vinifera]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/150 (48%), Positives = 102/150 (68%), Gaps = 5/150 (3%)

Query: 24  ATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEATGSVEVKR---GKKYQIGFK 80
           AT  PR LN++WG + RYW +PEK S  P EL+QVCWLE +GSV ++    G K++I F+
Sbjct: 214 ATFNPRQLNVIWGGNLRYWKMPEKNSGSPAELLQVCWLEVSGSVPIRSASIGTKFRITFQ 273

Query: 81  ISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPE--QG 138
           +S K+DAFGW+ CPV++MAK GKKGKY W K+       +    +P E  EI+  +    
Sbjct: 274 VSFKSDAFGWNNCPVYVMAKFGKKGKYAWTKISLRTDYSQXTNILPPEGLEIVTKDAPNV 333

Query: 139 ENQLYFGLYEVWNGKWKGGLLIHHAFIREV 168
            + +YFGLYEVW+GKWKGGL +H+A + ++
Sbjct: 334 NDTIYFGLYEVWSGKWKGGLELHNATVEQM 363

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115452|ref|XP_002332138.1| predicted protein [Populus trichocarpa] gi|222875188|gb|EEF12319.1| predicted protein [Populus trichocarpa]

 Score =  161 bits (408), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 87/171 (50%), Positives = 114/171 (66%), Gaps = 5/171 (2%)

Query: 1   MSSKKPHHEAEQ-EAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVC 59
           MSS KPH++AE  E ++ +++R   T KPRG NI+WG D RYW LPEK   +P EL+QVC
Sbjct: 1   MSSNKPHYDAESDEILKRDSQR--WTFKPRGFNIIWGLDERYWKLPEKGKVEPAELLQVC 58

Query: 60  WLEATGSVEVKRGK-KYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHL 118
           WLE TG+ +    + KY+I FK+ +K  AFG S  P+FMMAK+GK+G+Y W K+K  +  
Sbjct: 59  WLELTGTTKDSLPEGKYEIKFKLEVKPGAFGLSNSPIFMMAKVGKRGRYKWNKIKLQEKN 118

Query: 119 GKEAAEIPDEKFEILVP-EQGENQLYFGLYEVWNGKWKGGLLIHHAFIREV 168
                 I +  F+I V     +N+LYFGLYEVW GKWKGGLLIH A +  V
Sbjct: 119 SDNRPVIVEPTFQIEVKGTTDDNKLYFGLYEVWTGKWKGGLLIHGATVDPV 169

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15221633|ref|NP_174405.1| protein PHLOEM protein 2-LIKE A9 [Arabidopsis thaliana] gi|75200001|sp|Q9SA16.1|P2A09_ARATH RecName: Full=Protein PHLOEM PROTEIN 2-LIKE A9; Short=AtPP2-A9 gi|4512617|gb|AAD21686.1| F28K20.16 [Arabidopsis thaliana] gi|332193207|gb|AEE31328.1| protein PHLOEM protein 2-LIKE A9 [Arabidopsis thaliana]

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/181 (50%), Positives = 107/181 (59%), Gaps = 14/181 (7%)

Query: 1   MSSKKPHHEAEQEAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCW 60
           MSS+K  H      ME +  R     +P GLN VWG D RYW +P K    P EL  V W
Sbjct: 1   MSSQKSSHHKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWVIP-KEPRMPAELKMVSW 59

Query: 61  LEATGSVE-VKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHL- 118
           LE TGS + ++ GK Y+IGFKIS K DA GW   PVFM AK+GKKGK  W+++K +    
Sbjct: 60  LEVTGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNF 119

Query: 119 -----GKEAAEIPDEK---FEILVPEQGENQ---LYFGLYEVWNGKWKGGLLIHHAFIRE 167
                G E   IPDE    FEILV     NQ   L FGLYEVW G+WK GLLIH AF++E
Sbjct: 120 GILKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQE 179

Query: 168 V 168
           V
Sbjct: 180 V 180

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737973|emb|CBI27174.3| unnamed protein product [Vitis vinifera]

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/151 (48%), Positives = 101/151 (66%), Gaps = 4/151 (2%)

Query: 21  RTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEATGSV---EVKRGKKYQI 77
           + +AT  PR LN+ WG D RYW +P K SN P EL++VCWLE +GSV    V  G KY+I
Sbjct: 14  KMKATFNPRQLNVSWGRDSRYWKMPGKGSNRPAELLRVCWLEVSGSVPIGSVPPGTKYRI 73

Query: 78  GFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPEQ 137
            F+ISLK+DAFGW+ CPV++MAK GK+GK +W+K+    H   E   IP  +   +  E 
Sbjct: 74  TFQISLKSDAFGWNDCPVYVMAKFGKEGKNSWKKISLQAHY-SEPTSIPSTEGLEIETED 132

Query: 138 GENQLYFGLYEVWNGKWKGGLLIHHAFIREV 168
             + +YFGLY++W G WKGGL +H+A + ++
Sbjct: 133 ANDTIYFGLYDIWTGHWKGGLQLHNATVEQI 163

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849338|ref|XP_002892550.1| hypothetical protein ARALYDRAFT_312058 [Arabidopsis lyrata subsp. lyrata] gi|297338392|gb|EFH68809.1| hypothetical protein ARALYDRAFT_312058 [Arabidopsis lyrata subsp. lyrata]

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/176 (50%), Positives = 110/176 (62%), Gaps = 16/176 (9%)

Query: 7   HHEAEQEAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEATGS 66
           H+EAE   ME +  R     KP GLN +WG D RYW +P +    P EL +V WLE TGS
Sbjct: 12  HYEAESN-MEQDIVRKAWVFKPSGLNFIWGGDSRYWVIP-REDRTPAELKKVSWLEVTGS 69

Query: 67  VE-VKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHL------G 119
            + ++ GK YQIGFKISL ADA GW   PVFM AK+GKKGK  W+++K +++       G
Sbjct: 70  YDKIEPGKTYQIGFKISLTADATGWYQAPVFMSAKIGKKGKTIWKRIKSINNNIEKLKGG 129

Query: 120 KEAAEIPDE---KFEILV-PEQGENQ---LYFGLYEVWNGKWKGGLLIHHAFIREV 168
                IPDE   +FE+ V P+   NQ   L FGLYEVW GKWK GLLI+ AF+ EV
Sbjct: 130 TGPVNIPDETDGRFEVFVSPKVAINQDTKLQFGLYEVWTGKWKTGLLIYEAFVEEV 185

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472745|ref|XP_002277276.2| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Vitis vinifera]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 101/151 (66%), Gaps = 7/151 (4%)

Query: 24  ATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEATGSVEVKR---GKKYQIGFK 80
           AT  PR LN++WG + RYW +PE  S  P EL+QVCWLE +GSV ++    G K++I F+
Sbjct: 2   ATFNPRQLNVIWGGNLRYWKMPENGS--PAELLQVCWLEVSGSVPIRSASIGTKFRITFQ 59

Query: 81  ISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPE--QG 138
           +S K+DAFGW+ CPV++MAK GKKGKY W K+       +    +P E  EI+  +    
Sbjct: 60  VSFKSDAFGWNNCPVYVMAKFGKKGKYAWTKISLRTDYSQPTNILPPEGLEIVTKDAPNV 119

Query: 139 ENQLYFGLYEVWNGKWKGGLLIHHAFIREVK 169
            + +YFGLYEVW+GKWKGGL +H+A + ++ 
Sbjct: 120 NDTIYFGLYEVWSGKWKGGLELHNATVEQMN 150

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
TAIR|locus:2029534	180	PP2-A9 "phloem protein 2-A9" [	0.982	0.922	0.510	6.8e-40
TAIR|locus:504956313	184	PP2-A10 "AT1G10155" [Arabidops	0.964	0.885	0.502	2.1e-38
TAIR|locus:2133945	246	PP2-A1 "phloem protein 2-A1" [	0.798	0.548	0.319	2.2e-11
TAIR|locus:2203837	165	PP2-A4 "phloem protein 2-A4" [	0.810	0.830	0.287	1.8e-09
TAIR|locus:2056181	320	MEE66 "AT2G02240" [Arabidopsis	0.840	0.443	0.272	3.2e-08
TAIR|locus:2016349	257	PP2-B11 "phloem protein 2-B11"	0.242	0.159	0.5	3.7e-07
TAIR|locus:2056191	336	PP2-B1 "phloem protein 2-B1" [	0.461	0.232	0.314	5.3e-07
TAIR|locus:2153954	251	PP2-B12 "phloem protein 2-B12"	0.822	0.553	0.245	2.2e-06
TAIR|locus:2039528	463	PP2-A3 "phloem protein 2-A3" [	0.934	0.341	0.254	7.7e-06
TAIR|locus:2206255	411	PP2-A5 "phloem protein 2 A5" [	0.786	0.323	0.262	0.00018

TAIR|locus:2029534 PP2-A9 "phloem protein 2-A9" [Arabidopsis thaliana (taxid:3702)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 93/182 (51%), Positives = 112/182 (61%)

Query:     1 MSSKKP-HHEAEQEAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVC 59
             MSS+K  HH+A+ + ME +  R     +P GLN VWG D RYW +P K    P EL  V 
Sbjct:     1 MSSQKSSHHKADSK-MEQDNNRKAWISQPSGLNFVWGGDSRYWVIP-KEPRMPAELKMVS 58

Query:    60 WLEATGSVE-VKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHL 118
             WLE TGS + ++ GK Y+IGFKIS K DA GW   PVFM AK+GKKGK  W+++K +   
Sbjct:    59 WLEVTGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQN 118

Query:   119 ------GKEAAEIPDEK---FEILVPEQGENQ---LYFGLYEVWNGKWKGGLLIHHAFIR 166
                   G E   IPDE    FEILV     NQ   L FGLYEVW G+WK GLLIH AF++
Sbjct:   119 FGILKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQ 178

Query:   167 EV 168
             EV
Sbjct:   179 EV 180

GO:0005634 "nucleus" evidence=ISM

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:504956313 PP2-A10 "AT1G10155" [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 90/179 (50%), Positives = 110/179 (61%)

Query:     4 KKPHHEAEQEAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEA 63
             K  H+EAE   ME +  R     KP GLN +WG D RYW +P +    P EL +V WLE 
Sbjct:     8 KSSHYEAESN-MEQDIVRKAWVFKPSGLNFIWGGDSRYWVIPNE-DRTPAELKKVSWLEV 65

Query:    64 TGSVE-VKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPL----DHL 118
             TGS + ++ GK Y+IGFKIS  ADA GW   PVFM AK+GKKG+  W+++K +    D L
Sbjct:    66 TGSYDKIEPGKTYRIGFKISFTADATGWDQAPVFMSAKIGKKGRTIWKRIKSVNNNFDKL 125

Query:   119 --GKEAAEIPDE---KFEILV-PEQGENQ---LYFGLYEVWNGKWKGGLLIHHAFIREV 168
               G     IPDE   +FEI V P+   NQ   L FGLYEVW GKWK GLLI+ AF+ EV
Sbjct:   126 KGGTGPVNIPDETDGRFEIFVSPKVAINQDTKLQFGLYEVWTGKWKTGLLIYEAFVEEV 184

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2133945 PP2-A1 "phloem protein 2-A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 47/147 (31%), Positives = 69/147 (46%)

Query:    29 RGLNIVWGNDPRYWH-LPEKRS-NDPVELV---QVCWLEATGSVEVKR---GKKYQIGFK 80
             + L+I W +D  YW    EK S N+ VE V    VCWL+ TG  + +    G  Y++ FK
Sbjct:   100 KNLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFK 159

Query:    81 ISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPEQGE- 139
             + L+  A+GW   PV +   L    +    K   L  L +   +  D +    VPE+   
Sbjct:   160 VKLEDPAYGWD-TPVNLKLVLPNGKEKPQEKKVSLRELPRY--KWVDVRVGEFVPEKSAA 216

Query:   140 NQLYFGLYEVWNGKWKGGLLIHHAFIR 166
              ++ F +YE   G WK GL +    IR
Sbjct:   217 GEITFSMYEHAAGVWKKGLSLKGVAIR 243

GO:0005634 "nucleus" evidence=ISM

GO:0030246 "carbohydrate binding" evidence=ISS

GO:0009625 "response to insect" evidence=IDA

GO:0043394 "proteoglycan binding" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2203837 PP2-A4 "phloem protein 2-A4" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 44/153 (28%), Positives = 69/153 (45%)

Query:    26 IKPRGLNIVWGNDPRYWH-LP------EKRSNDPVELVQVCWLEATGSVEVKR---GKKY 75
             I  R L+I W +   YW  LP       ++  D   L  VCWL+  G  + +       Y
Sbjct:    14 IYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLETTY 73

Query:    76 QIGFKISLKADAFGWSGCPVFMMAKL--GKKGKYTWRKMKPLDHLGKEAAEIPDEKFEIL 133
             ++ + + L+  A GW+  PV +   L  GKK     R M   +H+GK   +I   +F + 
Sbjct:    74 EVVYVVKLEDTASGWN-IPVNLKLTLPDGKKRPQE-RSMCLKEHIGKRWIDISAGEF-VT 130

Query:   134 VPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIR 166
              P+    ++ F +YE  +  WK GL +    IR
Sbjct:   131 SPDNA-GEISFSMYETKSCCWKRGLFVKCVEIR 162

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2056181 MEE66 "AT2G02240" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 45/165 (27%), Positives = 72/165 (43%)

Query:    26 IKPRGLNIVWGNDPRYWH---LPEKRSNDPVELVQVCWLEATGSVEVK---RGKKYQIGF 79
             +  + L I WG+ P YW    +PE R N   EL+ VCW E  G    +    G +Y    
Sbjct:   156 LSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYI 215

Query:    80 KISLKADAFGWSGCPVFMMAKLGKKGKYTWRK----MKPLDHLGK-EAAEI--PDEKFE- 131
                 K    G    PV +   LG  G+ + ++    + P D  G+ E  ++  PD++ + 
Sbjct:   216 VFKTKDRCPGLGHLPVEV--GLGLVGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDG 273

Query:   132 ILVPEQGE-------NQLYFGLYEVWNGKWKGGLLIHHAFIREVK 169
              +  E GE       +++ F + E+ +  WK GL+I     R  K
Sbjct:   274 WMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRPTK 318

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

TAIR|locus:2016349 PP2-B11 "phloem protein 2-B11" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 3.7e-07, P = 3.7e-07
 Identities = 22/44 (50%), Positives = 28/44 (63%)

Query:    29 RGLNIVWGNDPRYWH---LPEKRSNDPVELVQVCWLEATGSVEV 69
             R LNIVWG++ RYWH   LP  R  +  EL+ V WLE TG + +
Sbjct:    99 RALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINI 142

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2056191 PP2-B1 "phloem protein 2-B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
 Identities = 28/89 (31%), Positives = 42/89 (47%)

Query:    31 LNIVWGNDPRYWH---LPEKRSNDPVELVQVCWLEATGSVE---VKRGKKYQIG--FKIS 82
             L I+WG+ P YW    +PE +     EL  VCW E  G +    + +G  Y +   FK +
Sbjct:   132 LTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTA 191

Query:    83 LKADAFGWSGCPVFMMAKLGKKGKYTWRK 111
                 ++G+   PV   A +G  GK   +K
Sbjct:   192 -NGRSYGFDLVPV--EAGVGFVGKVATKK 217

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2153954 PP2-B12 "phloem protein 2-B12" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 37/151 (24%), Positives = 66/151 (43%)

Query:    26 IKPRGLNIVWGNDPRYW---HLPEKRSNDPVELVQVCWLEATGSVE---VKRGKKYQ--I 77
             +  R L+IVW + P +W    +P+ R  +   L+ VCW E  G +    + +   Y   +
Sbjct:    98 LSARKLDIVWVDSPEFWIWVSIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYL 157

Query:    78 GFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRK--MKPLDHLGKEAAEIPDEKFEILVP 135
              FK   +  +FG+   P+ +  +  +   Y  R+  +K      +E   +  E  E  V 
Sbjct:   158 VFK-EQEMGSFGFESLPLEVSFRSTRTEVYNNRRVFLKSGTQESREDGWLEIELGEYYVG 216

Query:   136 EQGENQLYFGLYEVWNGKWKGGLLIHHAFIR 166
                E ++   + E   G WKGG+++    IR
Sbjct:   217 FDDE-EIEMSVLETREGGWKGGIIVQGIEIR 246

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2039528 PP2-A3 "phloem protein 2-A3" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 7.7e-06, P = 7.7e-06
 Identities = 44/173 (25%), Positives = 77/173 (44%)

Query:     9 EAEQEAMEWNAERTEATIKPRGLNIVWGNDPRYW---HLPEKRSNDP----VELVQVCWL 61
             + E+E  +    +    I  R LNI W +   +W   +L    S++      EL+ V W 
Sbjct:   292 QMEEEKNKQLIAQANRMICARDLNIEWSHSEEHWKWVNLDHNISSNTFVEVAELLGVYWF 351

Query:    62 EATGSV---EVKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKK--GKYTWRKMKPL- 115
             + +GS+   E+     Y++ F ++LK  AF W+      +  +  +  G  T  +   + 
Sbjct:   352 DVSGSLDTTEMAPWTHYEVLFVVNLKDSAFKWNAAVKMNLFYINSRPGGPGTQERAVDMR 411

Query:   116 DHLGKEAAEIPDEKFEILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIREV 168
              H+GK    I   +F I  PE     + F + EV +G  +GGL++    IR +
Sbjct:   412 QHIGKGWVTIHAGEF-ITTPEN-VGLIGFRMSEVDSGDNRGGLIVKGVLIRPI 462

GO:0005525 "GTP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009617 "response to bacterium" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=ISS

GO:0006826 "iron ion transport" evidence=RCA

GO:0006897 "endocytosis" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2206255 PP2-A5 "phloem protein 2 A5" [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 0.00018, P = 0.00018
 Identities = 41/156 (26%), Positives = 63/156 (40%)

Query:    26 IKPRGLNIVWGNDPRYWH---LPEKRSNDPVE----LVQVCWLEATGSVEVKR---GKKY 75
             I  R L+I W  D  +W    LP + SN+ V     L    WL+  G  + +      +Y
Sbjct:   261 IDARDLSIAWSEDSNHWTWLPLPNQNSNESVMEIAFLKSASWLDVAGKFDTRYLTPRTRY 320

Query:    76 QIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKP-----LDHLGKEAAEIPDEKF 130
             ++ F + L+   F W       + KL      TW K +       D++  +  +IP  +F
Sbjct:   321 EVVFVVKLEY-TFEWE-----TLVKLKLDLPNTWEKPQEQSVDMFDYISDQWLDIPVGEF 374

Query:   131 EILVPEQGENQLYFGLYEVWNGKWKGGLLIHHAFIR 166
                    GE  + F +YE     WK GL +    IR
Sbjct:   375 TTSKKNVGE--ISFAMYEHECQLWKSGLFVKGVTIR 408

GO:0005622 "intracellular" evidence=IEA

GO:0006952 "defense response" evidence=ISS

GO:0007165 "signal transduction" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0030246 "carbohydrate binding" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SA16	P2A09_ARATH	No assigned EC number	0.5027	0.9881	0.9277	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00150996 hypothetical protein (177 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	169
pfam14299	154	pfam14299, PP2, Phloem protein 2	1e-16

>gnl|CDD|222661 pfam14299, PP2, Phloem protein 2

 Score = 72.2 bits (178), Expect = 1e-16
 Identities = 50/150 (33%), Positives = 67/150 (44%), Gaps = 17/150 (11%)

Query: 28  PRGLNIVWGNDPRYWH---LPEKRSNDPVELVQVCWLEATGSVEVK---RGKKYQIGFKI 81
            R L+I WG+DPRYW    LPE R ++  EL+ VCWLE  G +  +    G  Y      
Sbjct: 9   ARALSITWGDDPRYWRWIPLPESRFSEVAELLDVCWLEIRGKINTRMLSPGTTYSAYLVF 68

Query: 82  SLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGKEAAEIPDEKFEILVPE----Q 137
            L   A+GW   PV     +    K    +   L        +  D   EI V E     
Sbjct: 69  KLADRAYGWDEKPVEFSVSVPDGQKSRQERYVCLPE------KRGDGWMEIEVGEFFNEG 122

Query: 138 GEN-QLYFGLYEVWNGKWKGGLLIHHAFIR 166
           GE+ ++ F + EV  G WKGGL++    IR
Sbjct: 123 GEDGEVEFSMREVDGGHWKGGLIVDGIEIR 152

Phloem protein 2 (PP2) is one of the most abundant and enigmatic proteins in the phloem sap. PP2 is translocated in the assimilate stream where its lectin activity or RNA-binding properties can exert effects over long distances. Length = 154

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	169
PF14299	154	PP2: Phloem protein 2	100.0

>PF14299 PP2: Phloem protein 2

Probab=100.00  E-value=1.7e-61  Score=376.00  Aligned_cols=142  Identities=38%  Similarity=0.720  Sum_probs=129.8

Q ss_pred             CCeEEEEecccceeEeCCCCCceec---CCCCCCcceEEeeeeEEEEEEEE---EccCCCeEEEEEEEEeccCcCCCccc
Q 030911           20 ERTEATIKPRGLNIVWGNDPRYWHL---PEKRSNDPVELVQVCWLEATGSV---EVKRGKKYQIGFKISLKADAFGWSGC   93 (169)
Q Consensus        20 g~kcymlsAR~L~I~Wgd~~~yW~~---p~srf~evAeL~~VcWLeI~G~i---~LSp~t~Y~ay~v~kl~~~a~Gw~~~   93 (169)
                      |+||||||||+|+|+||||++||+|   |++||.|||||++||||||+|+|   +|||+|+|+||||||+++++|||+.+
T Consensus         1 G~~cymlsaR~L~I~Wg~~~~yW~w~~~~~srf~evAeL~~V~WLeI~G~i~~~~Lsp~t~Y~vy~v~kl~~~~~Gw~~~   80 (154)
T PF14299_consen    1 GKKCYMLSARALSITWGDDPRYWKWIPLPDSRFSEVAELLQVCWLEIRGKINTRMLSPGTTYAVYFVFKLKDDAYGWDSP   80 (154)
T ss_pred             CCEEEEEEhhhCEEecCCCCcceeeccCCcccceeeeEEEEEEEEEEEEEEEceEcCCCCEEEEEEEEEecCCCCCCCcC
Confidence            8999999999999999999999997   78999999999999999999999   59999999999999999999999988


Q ss_pred             CeEEEEEecCCCcE-EEEEEeeCCCCCCcccccCCcEEEEEccC--C---CCcEEEEEEEEEeCCeeeeeEEEEEEEEEE
Q 030911           94 PVFMMAKLGKKGKY-TWRKMKPLDHLGKEAAEIPDEKFEILVPE--Q---GENQLYFGLYEVWNGKWKGGLLIHHAFIRE  167 (169)
Q Consensus        94 pv~~~~~~g~~g~~-~~~~v~l~~~~~~~~~~~pdgW~Eie~Ge--~---~~~ev~fs~~e~~~~~wK~GLiv~GieIRP  167 (169)
                      ||+++++++..++. ..+.+++..       .+.|||||||+|+  +   ++++|+|+|+|+++++||+||||+||||||
T Consensus        81 pv~~~v~~~~~~~~~~~~~~~~~~-------~r~dgW~Eie~GeF~~~~~~~~ev~f~~~E~~~~~wK~GLiv~GieIRP  153 (154)
T PF14299_consen   81 PVEFSVKVPDGEKYEQERKVCLPK-------ERGDGWMEIELGEFFNEGGDDGEVEFSMYEVDSGHWKGGLIVEGIEIRP  153 (154)
T ss_pred             CEEEEEEeCCCccccceeeEEcCC-------CCCCCEEEEEcceEEecCCCCcEEEEEEEEecCCcccCeEEEEEEEEec
Confidence            99999999543332 456677776       3569999999999  3   689999999999999999999999999999


Q ss_pred             c
Q 030911          168 V  168 (169)
Q Consensus       168 ~  168 (169)
                      |
T Consensus       154 K  154 (154)
T PF14299_consen  154 K  154 (154)
T ss_pred             C
Confidence            7

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00