Citrus Sinensis ID: 030913

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR
Secondary Structure (PSIPRED)
ccccEEEEcccccHHHHHcccccEEEEHHHHHHHccccccccHHHHHHHHHHHHccccccccccccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHcccccHHccEEEEEEEEEccccccccccccEEEEEcccccccccccccccEEEccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEccccHHHHHHHcccEEEEHHHHHHcccccccccHHHHHHHHHHHcccccccccccccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHcccccHHHHEEEEEEEEEccccccccccccEEEcccccccHHHHHccccccEEccccccccccc
Coil and Loop (DISEMBL)
MGLKAALITTNSRLKSFGDKLGFATLQLNELIetsdslsgspIDVVASELLKLLGlqrgkmeevsQFDLVLVHIgagektnddkgkaVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIdekssdlsalfprqsytmkgetprndvr
Flexible Loop (DISEMBL)
MGLKAALITTNSRLKSFGDKLGFATLQLNELIEtsdslsgspIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAgektnddkgkAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDekssdlsalfprqsytmkgetprndvr
Low Complexity Region (SEG)
MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR
Disordered region (IsUnstruct)
*******ITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISI****************************
Disordered Region (DISOPRED)
***KAALITTNSRLKSFGDKLGFATLQLNE****************ASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKT******AVAHDLEYINALVRVILQMA*****VGSRLHLSVVLSYGQVLEA*******************ALFPRQSYT***********
Disordered Region (DISEMBL)
MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTM**********
Disordered Region (DISPRO)
*GLKAALITTNSRLKSFGDKLGFATLQLNELIETS***SGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMK*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
224092198	309	predicted protein [Populus trichocarpa]	1.0	0.546	0.597	6e-50
225429560	320	PREDICTED: uncharacterized protein LOC10	0.994	0.525	0.568	5e-49
449494427	315	PREDICTED: uncharacterized LOC101217985	0.994	0.533	0.538	1e-44
449450351	315	PREDICTED: uncharacterized protein LOC10	0.994	0.533	0.538	1e-44
357437483	306	hypothetical protein MTR_1g016410 [Medic	0.976	0.539	0.544	4e-42
356564061	308	PREDICTED: uncharacterized protein LOC10	0.928	0.509	0.544	7e-42
255550804	313	conserved hypothetical protein [Ricinus	1.0	0.539	0.532	9e-42
255647370	308	unknown [Glycine max]	0.928	0.509	0.538	3e-41
356552344	307	PREDICTED: uncharacterized protein LOC10	0.928	0.511	0.526	2e-39
388507454	304	unknown [Lotus japonicus]	0.923	0.513	0.532	9e-37

>gi|224092198|ref|XP_002309505.1| predicted protein [Populus trichocarpa] gi|222855481|gb|EEE93028.1| predicted protein [Populus trichocarpa]

 Score =  201 bits (512), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 101/169 (59%), Positives = 120/169 (71%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG+KAA+IT N  LKSFG KLG      N+L     SLSGS  D V  ELLKLLG Q GK
Sbjct: 83  MGMKAAIITNNPGLKSFGGKLGLTVFPFNDLKGNEFSLSGSSTDFVTFELLKLLGFQEGK 142

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
             E SQFDLV VH+GAGE+ N +  K +A D+EYI+ALV  I+++AQP +E+GSRLHLS+
Sbjct: 143 TLETSQFDLVFVHVGAGERVNAEGHKTIAIDVEYIDALVDGIMRIAQPGSEIGSRLHLSL 202

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR 169
           V+SYG V E D  +LS+L S DE    LS LFP QSYTMKGE PRND+R
Sbjct: 203 VMSYGYVTEGDGRDLSILTSKDEMDPALSKLFPLQSYTMKGEKPRNDIR 251

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429560|ref|XP_002279873.1| PREDICTED: uncharacterized protein LOC100255893 [Vitis vinifera] gi|296081666|emb|CBI20671.3| unnamed protein product [Vitis vinifera]

 Score =  198 bits (504), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 96/169 (56%), Positives = 129/169 (76%), Gaps = 1/169 (0%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG++AA++  NS L SFG  LGF  +Q +ELI+ +  LS  P+DVVASE LKLLG Q GK
Sbjct: 95  MGMRAAIVANNSSLTSFGGTLGFTVMQTDELIKNNHPLSEPPVDVVASESLKLLGFQEGK 154

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
             E SQFDL+ +HIGAGEK N  + + +A+D+EYIN LV  I+Q A+P +E+GSRLHLS+
Sbjct: 155 TLETSQFDLIFMHIGAGEKANG-QTEIIANDVEYINGLVGRIMQTAEPGSEIGSRLHLSL 213

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR 169
           V+SYG V + D+ +LSVL++ +E +SDLS+L PRQSYTMKG  PR+++R
Sbjct: 214 VMSYGAVSKDDDPSLSVLVTKNENNSDLSSLSPRQSYTMKGGNPRDNIR 262

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449494427|ref|XP_004159543.1| PREDICTED: uncharacterized LOC101217985 [Cucumis sativus]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 91/169 (53%), Positives = 127/169 (75%), Gaps = 1/169 (0%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG++AAL+T NS ++S G +LG + L+L+EL++  + L   P+D +ASELLK LG Q GK
Sbjct: 90  MGMRAALLTNNSVVQSLGSELGISLLRLDELMQM-NHLGLPPVDFLASELLKRLGFQDGK 148

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           +++ S+FDL+ VHIG G+K N +K +  + +++YI+ALV  ILQ  QP +E+GSRLHLS+
Sbjct: 149 IQDASEFDLLFVHIGVGDKVNGEKDRTASDEMKYIDALVGDILQKTQPGSEIGSRLHLSL 208

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR 169
           ++SYG V E D ++LSVL S   K+SDLS LFPRQSYTM GE  RND+R
Sbjct: 209 LMSYGDVFEDDENSLSVLTSNCGKNSDLSVLFPRQSYTMMGEVQRNDIR 257

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450351|ref|XP_004142926.1| PREDICTED: uncharacterized protein LOC101217985 [Cucumis sativus]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 91/169 (53%), Positives = 127/169 (75%), Gaps = 1/169 (0%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG++AAL+T NS ++S G +LG + L+L+EL++  + L   P+D +ASELLK LG Q GK
Sbjct: 90  MGMRAALLTNNSVVQSLGSELGISLLRLDELMQM-NHLGLPPVDFLASELLKRLGFQDGK 148

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           +++ S+FDL+ VHIG G+K N +K +  + +++YI+ALV  ILQ  QP +E+GSRLHLS+
Sbjct: 149 IQDASEFDLLFVHIGVGDKVNGEKDRTASDEMKYIDALVGDILQKTQPGSEIGSRLHLSL 208

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR 169
           ++SYG V E D ++LSVL S   K+SDLS LFPRQSYTM GE  RND+R
Sbjct: 209 LMSYGDVFEDDENSLSVLTSNCGKNSDLSVLFPRQSYTMMGEVQRNDIR 257

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437483|ref|XP_003589017.1| hypothetical protein MTR_1g016410 [Medicago truncatula] gi|355478065|gb|AES59268.1| hypothetical protein MTR_1g016410 [Medicago truncatula] gi|388492878|gb|AFK34505.1| unknown [Medicago truncatula]

 Score =  176 bits (445), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/169 (54%), Positives = 120/169 (71%), Gaps = 4/169 (2%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG+KAA++T +S LKSF  KLGF+ +QL+ L++   S S    D+VA E+LKLLG Q GK
Sbjct: 84  MGMKAAIMTNHSGLKSFSTKLGFSVVQLDGLVKQHASESQDS-DIVAVEILKLLGFQEGK 142

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           + + SQFDLV +H+GAGEK N  +  A   D+E+++ALV  I++ AQP ++VGSRLHLSV
Sbjct: 143 VLDNSQFDLVFIHVGAGEKDNGSEQNA---DVEFVDALVGAIMRQAQPGSDVGSRLHLSV 199

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR 169
           V+SYG+VLE D S  SV   +DEK S    L+P QSY MKG  PR DVR
Sbjct: 200 VMSYGKVLEDDESKFSVSKKVDEKDSCFLTLYPLQSYAMKGGVPRKDVR 248

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564061|ref|XP_003550275.1| PREDICTED: uncharacterized protein LOC100780200 [Glycine max]

 Score =  175 bits (443), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 92/169 (54%), Positives = 118/169 (69%), Gaps = 12/169 (7%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           +G+KAA++T NS LKSF  KLGF+ L+L+EL+       G   +VVA ELLK LG + GK
Sbjct: 94  IGMKAAILTNNSSLKSFSAKLGFSVLKLDELV------GGGSAEVVALELLKFLGFKEGK 147

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           + +   FDLV  HIGAGE+      K VA D+ Y++ALV  ++  AQP +++ SRLHLSV
Sbjct: 148 VLDSDHFDLVFFHIGAGEQ------KVVAADVGYMDALVGGVMSQAQPGSDISSRLHLSV 201

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR 169
           V+SYG VLEAD+S  SVL  +DEK+S LS L+P QSYTMKG  PR DVR
Sbjct: 202 VMSYGNVLEADDSKFSVLKRVDEKNSHLSMLYPLQSYTMKGGIPRKDVR 250

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550804|ref|XP_002516450.1| conserved hypothetical protein [Ricinus communis] gi|223544270|gb|EEF45791.1| conserved hypothetical protein [Ricinus communis]

 Score =  174 bits (442), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 90/169 (53%), Positives = 115/169 (68%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           M +KAA+IT N  L+SFG KLGF  L    L  T  S   S  + + SELLKLLG Q GK
Sbjct: 87  MEMKAAIITDNPSLQSFGSKLGFTVLSFKCLNGTHKSHYESSFEDLTSELLKLLGFQEGK 146

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
             E SQFDLV++H GA E  N D  +A   D  Y+N++V+  +  A+P +E+GSRLHLS+
Sbjct: 147 TIEASQFDLVILHTGASELLNSDSSEATECDAHYLNSMVKETMYNAKPGSEIGSRLHLSL 206

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR 169
           V+SYG   + D++NLSVL+S DE +SDLS L PRQSYTMKGE  R++VR
Sbjct: 207 VMSYGNASKIDSTNLSVLVSKDEMNSDLSVLVPRQSYTMKGEKLRDNVR 255

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647370|gb|ACU24151.1| unknown [Glycine max]

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/169 (53%), Positives = 117/169 (69%), Gaps = 12/169 (7%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           +G+KAA++T NS LKSF  KLGF+ L+L+EL+       G   +VVA ELLK LG + GK
Sbjct: 94  IGMKAAILTNNSSLKSFSAKLGFSVLKLDELV------GGGSAEVVALELLKFLGFKEGK 147

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           + +   FDLV  HIGAGE+      K VA D+ Y++ALV  ++  AQP +++ SRLHLSV
Sbjct: 148 VLDSDHFDLVFFHIGAGEQ------KVVAADVGYMDALVGGVMSQAQPGSDISSRLHLSV 201

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR 169
           V+SYG VLEAD+   SVL  +DEK+S LS L+P QSYTMKG  PR DVR
Sbjct: 202 VMSYGNVLEADDFKFSVLKRVDEKNSHLSMLYPLQSYTMKGGIPRKDVR 250

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552344|ref|XP_003544528.1| PREDICTED: uncharacterized protein LOC100817041 [Glycine max]

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/169 (52%), Positives = 114/169 (67%), Gaps = 12/169 (7%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG+KAA++T NS LKSF  KLGF+ L+L+EL+       G   +VVA ELLKLLG Q GK
Sbjct: 93  MGMKAAILTNNSSLKSFSAKLGFSVLKLDELV------VGGSAEVVALELLKLLGFQEGK 146

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           + +   FDLV  H GAGE+      K VA D+ Y++ALV  ++   QP +++ SRLHLSV
Sbjct: 147 VLDSDHFDLVFFHNGAGEQ------KVVAADMGYMDALVGGVMSQMQPGSDISSRLHLSV 200

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR 169
           V+SYG +LE D+S  SV   +DEK+S LS L+P QSY MKG  PR DVR
Sbjct: 201 VVSYGNILEGDDSKFSVSKRVDEKNSHLSVLYPLQSYAMKGGIPRKDVR 249

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507454|gb|AFK41793.1| unknown [Lotus japonicus]

 Score =  158 bits (399), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 90/169 (53%), Positives = 112/169 (66%), Gaps = 13/169 (7%)

Query: 1   MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
           MG+KAA++T +S LKSF  KLGF  LQL+ L +  D+      DVVA ELLKLLG Q GK
Sbjct: 91  MGMKAAILTNHSGLKSFSSKLGFNVLQLDALAKDYDA-GLHENDVVALELLKLLGFQEGK 149

Query: 61  MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
           +++ + FDLV  HIGAGEK           ++EYINALV  ++  AQP +++ SRLHLS+
Sbjct: 150 VQDSNNFDLVFFHIGAGEK-----------NVEYINALVGGLMNQAQPGSDISSRLHLSL 198

Query: 121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR 169
           V+SYG+V E D S  SV    DEKS  LS L+P QSY MKG  PR DVR
Sbjct: 199 VMSYGKVSEDDESKFSVSKRADEKSY-LSLLYPLQSYAMKGGFPRKDVR 246

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
TAIR|locus:2181940	306	AT5G11810 "AT5G11810" [Arabido	0.940	0.519	0.455	3e-30

TAIR|locus:2181940 AT5G11810 "AT5G11810" [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 77/169 (45%), Positives = 106/169 (62%)

Query:     1 MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGK 60
             MGLKAAL+T +S L SFG  +G   LQL+E+ + SDS    P D  +S+LLKLLG + GK
Sbjct:    90 MGLKAALVTDSSTLTSFGKLIGLDVLQLSEICQESDSF---PSDATSSKLLKLLGFEGGK 146

Query:    61 MEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV 120
               +V+ +DLV VH G  E  N        +++  +++L+  I+ MAQP +E+ SRLHLSV
Sbjct:   147 CLDVNLYDLVFVHFGVDEYNN-------GNNMGILDSLIGSIMGMAQPGSEILSRLHLSV 199

Query:   121 VLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVR 169
             VLSYG V + D S   +    ++ +     L PRQSYTM+GE  R+DVR
Sbjct:   200 VLSYGSVTDKDVSVFPIKTPQEDINPAFIGLVPRQSYTMRGEKTRDDVR 248


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.132   0.347    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      169       169   0.00082  108 3  11 23  0.44    32
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  516 (55 KB)
  Total size of DFA:  109 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.21u 0.12s 16.33t   Elapsed:  00:00:00
  Total cpu time:  16.21u 0.12s 16.33t   Elapsed:  00:00:00
  Start:  Fri May 10 03:34:16 2013   End:  Fri May 10 03:34:16 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0013020201 hypothetical protein (309 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	169
COG3635	408	Predicted phosphoglycerate mutase, AP superfamily	99.91
PRK04024	412	cofactor-independent phosphoglycerate mutase; Prov	99.75
PRK04135	395	cofactor-independent phosphoglycerate mutase; Prov	99.73
PRK04200	395	cofactor-independent phosphoglycerate mutase; Prov	99.7
TIGR02535	396	hyp_Hser_kinase proposed homoserine kinase. The pr	99.69
TIGR00306	396	apgM 2,3-bisphosphoglycerate-independent phosphogl	99.68
PF01676	252	Metalloenzyme: Metalloenzyme superfamily; InterPro	99.33
PRK12383	406	putative mutase; Provisional	98.57
PRK05434	507	phosphoglyceromutase; Provisional	97.88
PLN02538	558	2,3-bisphosphoglycerate-independent phosphoglycera	97.83
TIGR01696	381	deoB phosphopentomutase. This protein is involved	97.62
PRK05362	394	phosphopentomutase; Provisional	97.32
TIGR01307	501	pgm_bpd_ind 2,3-bisphosphoglycerate-independent ph	97.11
cd00016	384	alkPPc Alkaline phosphatase homologues; alkaline p	94.88
COG0696	509	GpmI Phosphoglyceromutase [Carbohydrate transport	88.62
KOG4513	531	consensus Phosphoglycerate mutase [Carbohydrate tr	88.32
PF01663	365	Phosphodiest: Type I phosphodiesterase / nucleotid	82.97

>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]

Probab=99.91  E-value=8.4e-25  Score=196.90  Aligned_cols=89  Identities=22%  Similarity=0.333  Sum_probs=88.1

Q ss_pred             CCceeEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcC
Q 030913            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (169)
Q Consensus         2 GmKAA~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~   81 (169)
                      |||||||+.++++||+|+.+||+|++++++||+.+|    +|++++++|+++|          ++|||||||||++|+++
T Consensus       246 glk~a~Ia~~~l~KGlar~~GmDvi~vegatG~~dt----n~~~k~k~a~eal----------~~yDfv~vhik~tDeag  311 (408)
T COG3635         246 GLKGACIAAVPLIKGLARLVGMDVIEVEGATGYIDT----NYRGKAKAAIEAL----------KEYDFVFVHIKATDEAG  311 (408)
T ss_pred             CcceEEEEecHHHHhHHHHhCCceeecccccCccCc----cHHHHHHHHHHHH----------hhCCEEEEEeccCcccc
Confidence            899999999999999999999999999999999999    9999999999999          99999999999999999


Q ss_pred             cCCCcccccC-hHHHHHHHHHHHH
Q 030913           82 DDKGKAVAHD-LEYINALVRVILQ  104 (169)
Q Consensus        82 hdG~~~~k~d-iE~iD~lVg~im~  104 (169)
                      |||+++.|+. ||+||++++++++
T Consensus       312 HdG~~e~Kv~~IE~iD~~i~pll~  335 (408)
T COG3635         312 HDGDFEGKVRVIEDIDKAIGPLLD  335 (408)
T ss_pred             CCCCHHHhHHHHHHHHHHhhhhhc
Confidence            9999999999 9999999999997

>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional

Probab=99.75  E-value=2.2e-18  Score=155.18  Aligned_cols=92  Identities=22%  Similarity=0.351  Sum_probs=89.7

Q ss_pred             CCceeEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcC
Q 030913            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (169)
Q Consensus         2 GmKAA~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~   81 (169)
                      |||+|+|+++++++|+|+.+||+|+.++++||..++    ++.+++++++++|          ++|||||+|++++|.++
T Consensus       243 gl~ga~is~~~l~kGLa~~~Gm~~~~vpg~tg~~~t----~~~~k~~~~~~~l----------~~~Dfv~vh~~~~D~~G  308 (412)
T PRK04024        243 GLKAACVAGTALIKGIARMVGMDVITVEGATGGKDT----NYMAKAKAAVELL----------KEYDFVLLNIKGTDEAG  308 (412)
T ss_pred             CCceEEEeChHHHHHHHHHcCCceeccCCCcCCCCC----CHHHHHHHHHHHh----------ccCCEEEEeccCcchhh
Confidence            899999999999999999999999999999999999    9999999999999          78999999999999999


Q ss_pred             cCCCcccccC-hHHHHHHHHHHHHhcC
Q 030913           82 DDKGKAVAHD-LEYINALVRVILQMAQ  107 (169)
Q Consensus        82 hdG~~~~k~d-iE~iD~lVg~im~~a~  107 (169)
                      |+|+++.|+. ||.+|+.++.|++..+
T Consensus       309 H~gd~~~k~~aiE~iD~~l~~il~~l~  335 (412)
T PRK04024        309 HDGDFEGKVEVIEKIDKMLGYILDNLD  335 (412)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999 9999999999998875

>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional

Probab=99.73  E-value=7.6e-18  Score=151.88  Aligned_cols=82  Identities=20%  Similarity=0.307  Sum_probs=79.0

Q ss_pred             CCceeEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcC
Q 030913            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (169)
Q Consensus         2 GmKAA~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~   81 (169)
                      |||+|+|+++++++|+|+.+||+|+. +++          ++.+++++++++|          ++|||||+|++++|+++
T Consensus       236 Glkga~Ia~~~l~kGi~~~~Gm~~i~-~ga----------~~~~k~~~a~~~l----------~~~DfV~vhvk~~DeaG  294 (395)
T PRK04135        236 KLKAAAIASYPMYRGLAKLVGMDVLP-TGQ----------TLEDEIKTLKENW----------NDYDFFFLHVKKTDSYG  294 (395)
T ss_pred             CCceEEEehhHHHHHHHHHcCCeecC-CCC----------CHHHHHHHHHHHH----------hcCCEEEEEeccCchhh
Confidence            89999999999999999999999999 875          8999999999999          89999999999999999


Q ss_pred             cCCCcccccC-hHHHHHHHHHHHH
Q 030913           82 DDKGKAVAHD-LEYINALVRVILQ  104 (169)
Q Consensus        82 hdG~~~~k~d-iE~iD~lVg~im~  104 (169)
                      |+|+++.|++ ||+||+.+.++++
T Consensus       295 H~gd~~~Kv~~IE~iD~~l~~ll~  318 (395)
T PRK04135        295 EDGNFEEKVKVIEEVDALLPEILA  318 (395)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999 9999999999883

>PRK04200 cofactor-independent phosphoglycerate mutase; Provisional

Probab=99.70  E-value=1.8e-17  Score=148.32  Aligned_cols=91  Identities=25%  Similarity=0.332  Sum_probs=87.5

Q ss_pred             CCceeEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcC
Q 030913            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (169)
Q Consensus         2 GmKAA~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~   81 (169)
                      |+|+|+|++.++++|+|+.+||+|+.+++++|..+|    +|.+|+++++++|          ++|||||+|++++|.++
T Consensus       233 gl~~a~ia~~~l~kGla~~~Gm~~~~vpgatg~~dt----~~~~k~~~a~~~l----------~~~DfV~vh~~~~D~aG  298 (395)
T PRK04200        233 GLKGAVISAVDLLKGIGIYAGLDVIEVPGATGYLDT----NYEGKAEAALEAL----------KTHDFVFVHVEAPDEAG  298 (395)
T ss_pred             CCceEEEeccHHHHHHHHHcCCccccCCCccccccc----chHHHHHHHHHHh----------ccCCEEEEEecCcchhh
Confidence            899999999999999999999999999999999999    9999999999999          78999999999999999


Q ss_pred             cCCCcccccC-hHHHHHH-HHHHHHhc
Q 030913           82 DDKGKAVAHD-LEYINAL-VRVILQMA  106 (169)
Q Consensus        82 hdG~~~~k~d-iE~iD~l-Vg~im~~a  106 (169)
                      |+|+++.|++ ||.||+. +++++++-
T Consensus       299 H~gd~~~kv~aiE~lD~~~~~~ll~al  325 (395)
T PRK04200        299 HEGDLEAKIKAIEDIDERVVGPILEAL  325 (395)
T ss_pred             ccCCHHHHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999 9999997 56788775

>TIGR02535 hyp_Hser_kinase proposed homoserine kinase

Probab=99.69  E-value=4.9e-17  Score=145.61  Aligned_cols=92  Identities=21%  Similarity=0.352  Sum_probs=87.9

Q ss_pred             CCceeEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcC
Q 030913            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (169)
Q Consensus         2 GmKAA~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~   81 (169)
                      |+|+|+|++.++++|+|+.+||+|+.+++++|..+|    +|.+|++.++++|          ++|||||+|++++|.++
T Consensus       234 gl~~a~ia~~~l~kGla~~~Gm~~~~vpgatg~~dt----~~~~k~~~~~~~l----------~~~Dfv~vh~~~~D~aG  299 (396)
T TIGR02535       234 GIRGAMISAVDLLKGIGIYAGLERIEVEGATGYLDT----NYEGKVRAALEAL----------ETYDFVVVHVEAPDEAG  299 (396)
T ss_pred             CCceEEEeccHHHHHHHHHcCCccccCCcccccccc----chHHHHHHHHHHH----------hhCCEEEEEeCCCChhh
Confidence            899999999999999999999999999999999999    9999999999999          78999999999999999


Q ss_pred             cCCCcccccC-hHHHHHH-HHHHHHhcC
Q 030913           82 DDKGKAVAHD-LEYINAL-VRVILQMAQ  107 (169)
Q Consensus        82 hdG~~~~k~d-iE~iD~l-Vg~im~~a~  107 (169)
                      |+|+++.|++ ||.+|+. +++++++.+
T Consensus       300 H~gd~~~kv~aIE~lD~~~~~~ll~al~  327 (396)
T TIGR02535       300 HEGDLEAKIKAIELIDSRIVGPLLEALS  327 (396)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999 9999996 568998763

The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.

>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form

Probab=99.68  E-value=4e-17  Score=146.31  Aligned_cols=92  Identities=20%  Similarity=0.312  Sum_probs=88.6

Q ss_pred             CCceeEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcC
Q 030913            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (169)
Q Consensus         2 GmKAA~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~   81 (169)
                      |+|+|+|++.++++|+|+.+||+|+.+++++|..+|    +|.+|+++++++|          ++|||||+|++++|.++
T Consensus       237 gl~~a~ia~~~l~kGLa~~~Gm~~~~v~gatg~~dt----~~~~k~~~~~~~l----------~~yDfv~v~~~~~D~aG  302 (396)
T TIGR00306       237 GLRGAMIAEVDLIKGLARLIGMDVIRVEGATGGIDT----DYRGKVRALILAL----------EEYDFVLVHTKGPDEAG  302 (396)
T ss_pred             CCceEEEechHHHHHHHHHcCCeeecCCcccccccc----cHHHHHHHHHHHh----------hcCCEEEEEecCCChhh
Confidence            899999999999999999999999999999999999    9999999999999          78999999999999999


Q ss_pred             cCCCcccccC-hHHHHHHHHHHHHhcC
Q 030913           82 DDKGKAVAHD-LEYINALVRVILQMAQ  107 (169)
Q Consensus        82 hdG~~~~k~d-iE~iD~lVg~im~~a~  107 (169)
                      |+|+++.|++ ||.+|+.+..++++.+
T Consensus       303 H~gd~~~k~~aIE~iD~~l~~~l~~l~  329 (396)
T TIGR00306       303 HDGDPELKVRAIEKIDSKIVGPLLALD  329 (396)
T ss_pred             hcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999 9999999997787753

This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).

>PF01676 Metalloenzyme: Metalloenzyme superfamily; InterPro: IPR006124 This domain unites alkaline phosphatase, N-acetylgalactosamine-4-sulphatase, and cerebroside sulphatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulphatases

Probab=99.33  E-value=7.5e-13  Score=110.56  Aligned_cols=113  Identities=17%  Similarity=0.293  Sum_probs=94.0

Q ss_pred             CCceeEeecCchhhhhhhhhc-ceeeecCcccccCCCCCCCChhHH--HHHHHHHhccccCcccccCcccEEEEEeccCC
Q 030913            2 GLKAALITTNSRLKSFGDKLG-FATLQLNELIETSDSLSGSPIDVV--ASELLKLLGLQRGKMEEVSQFDLVLVHIGAGE   78 (169)
Q Consensus         2 GmKAA~Vt~~~liksfg~~lG-f~V~~~~~l~g~~ds~~~~~~~~~--a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d   78 (169)
                      |++++.|+.++.+.+++..+| +++...+++++..++    ++.++  ++++++.|        +..+|||||+|++.+|
T Consensus        85 ~l~~~~ia~~~~~~~i~~~~~g~~v~~~~g~t~~~~~----~~~~~~~~~~~~~~l--------~~~~~~~v~~~~~~~D  152 (252)
T PF01676_consen   85 GLKGAGIAETPKIGGIADFFGGMDVISVEGATGDVDP----DMSAKEIAEAAIEAL--------KKDKYDFVFVHVKGTD  152 (252)
T ss_dssp             THHEEEEEECHHHHHHHHHTTTEEEE--STSSCCGST----TTTHHHHHHHHHHHH--------HHTTSSEEEEEEEHHH
T ss_pred             CceecceecccccceeHHHhCCccccccccccccccc----chhhHHHHHHHHHhh--------hcccCCeEEEeecCcc
Confidence            689999999999999999999 999999999998888    55444  89999999        6689999999999999


Q ss_pred             CcCcCCCcccccC-hHHHHHHHHHHHHhc-CCcccccceeEEEEEEeeccccccCC
Q 030913           79 KTNDDKGKAVAHD-LEYINALVRVILQMA-QPATEVGSRLHLSVVLSYGQVLEADN  132 (169)
Q Consensus        79 ~a~hdG~~~~k~d-iE~iD~lVg~im~~a-~~gs~i~srlhlsvvlsYG~~~~~~~  132 (169)
                      .++|+++++.+.. ||++|+.|+++++.. +++      .-|.|.=-.|+...-..
T Consensus       153 ~~GH~~~~~~~~~~ie~~D~~l~~l~~~~~~~~------~~liiTaDHg~~~~~~~  202 (252)
T PF01676_consen  153 EAGHRGDPEAYIEAIERIDRFLGRLLEALDKED------DLLIITADHGNDETMGH  202 (252)
T ss_dssp             HHHTTT-HHHHHHHHHHHHHHHHHHHHHHHHTT------EEEEEEESSBSTTTSBS
T ss_pred             hhhccCCHHHHHHHHHHHHHHHHHHHHHHhcCC------CEEEEECCCCCccccCC
Confidence            9999999999999 999999999999986 433      34555556676554433

This domain is also related to alkaline phosphatase IPR001952 from INTERPRO []. The most conserved residues are probably involved in metal binding and catalysis.; GO: 0003824 catalytic activity, 0046872 metal ion binding; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3UN5_F 3UN3_B 3M8Y_C 3UO0_B 3UN2_B 3UNY_E ....

>PRK12383 putative mutase; Provisional

Probab=98.57  E-value=1.3e-07  Score=86.23  Aligned_cols=86  Identities=13%  Similarity=0.115  Sum_probs=68.6

Q ss_pred             eeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHH
Q 030913           24 ATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVI  102 (169)
Q Consensus        24 ~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~i  102 (169)
                      +++..+++++....   .+.+.++.+++++|        +...+||||+|++..|.++|+++.+.+.. ||++|+.++.+
T Consensus       255 Di~s~~G~t~~~~~---~~t~~~~~~~l~aL--------~~~~~dlvfvnl~~~D~~GH~~d~~~y~~aiE~iD~~lg~l  323 (406)
T PRK12383        255 DIVNNPYGVSWQNL---VDTQRVMDITLDEF--------NTHPTAFICTNIQETDLAGHAEDVARYAERLEVVDRNLARL  323 (406)
T ss_pred             HeeccCCccccccc---CCHHHHHHHHHHHH--------hcCCCCEEEEeccCCccccccCCHHHHHHHHHHHHHHHHHH
Confidence            77777888775544   25679999999999        22348999999999999999999999999 99999999999


Q ss_pred             HHhcCCcccccceeEEEEEEeecc
Q 030913          103 LQMAQPATEVGSRLHLSVVLSYGQ  126 (169)
Q Consensus       103 m~~a~~gs~i~srlhlsvvlsYG~  126 (169)
                      ++.-+++.      .|.+.--.|+
T Consensus       324 l~~L~~~~------lliITaDHG~  341 (406)
T PRK12383        324 LEAMTPDD------CLVVMADHGN  341 (406)
T ss_pred             HHHhccCC------EEEEEcCCCC
Confidence            99887532      3444444555

>PRK05434 phosphoglyceromutase; Provisional

Probab=97.88  E-value=2e-05  Score=73.72  Aligned_cols=60  Identities=10%  Similarity=0.233  Sum_probs=53.4

Q ss_pred             CChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 030913           41 SPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP  108 (169)
Q Consensus        41 ~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~~  108 (169)
                      -++..++.++++.|        +..+|||||+|+..+|.++|+|+++.+.. ||.+|+.||+|++..+.
T Consensus       370 Ms~~e~~d~~i~~l--------~~~~~Dfv~vnf~~~D~vGHtg~~~a~~~AIe~vD~~LGrll~aLk~  430 (507)
T PRK05434        370 MSAYEVTDKLVEAI--------ESGKYDFIILNFANPDMVGHTGNLEAAVKAVEAVDECLGRVVDAVLK  430 (507)
T ss_pred             CcHHHHHHHHHHHH--------hccCCCEEEEEecCcchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            36677999999999        23579999999999999999999999999 99999999999998753

>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Probab=97.83  E-value=2.8e-05  Score=73.81  Aligned_cols=80  Identities=18%  Similarity=0.138  Sum_probs=65.1

Q ss_pred             cCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcCC-ccc
Q 030913           34 TSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP-ATE  111 (169)
Q Consensus        34 ~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~~-gs~  111 (169)
                      ++|---.-++..++.++++.+        ...+|||||+|+..+|.++|.|+++.++. ||.+|+.+++|+++.++ |  
T Consensus       396 tyd~~PeMSA~eVtd~~i~~i--------~~~~ydfi~vNfan~DmvGHtG~~ea~ikAIE~vD~~Lg~Il~al~~~g--  465 (558)
T PLN02538        396 PFNVQPKMKALEIAEKARDAL--------LSGKFDQVRVNLANGDMVGHTGDLEATIVACEAVDAAVKEILDAVEQVG--  465 (558)
T ss_pred             CcccCCCCCHHHHHHHHHHHH--------hcCCCCEEEEeccCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            344433446677899999999        44679999999999999999999999999 99999999999998632 3  


Q ss_pred             ccceeEEEEEEeeccc
Q 030913          112 VGSRLHLSVVLSYGQV  127 (169)
Q Consensus       112 i~srlhlsvvlsYG~~  127 (169)
                          -.|.|.--.||+
T Consensus       466 ----~~liITADHGNa  477 (558)
T PLN02538        466 ----GIYLVTADHGNA  477 (558)
T ss_pred             ----CEEEEeCCCCCc
Confidence                346666678877

>TIGR01696 deoB phosphopentomutase

Probab=97.62  E-value=0.00012  Score=66.65  Aligned_cols=86  Identities=6%  Similarity=0.022  Sum_probs=65.2

Q ss_pred             hhhhhhhhhcceeeec---------CcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCC-cCc
Q 030913           13 RLKSFGDKLGFATLQL---------NELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK-TND   82 (169)
Q Consensus        13 liksfg~~lGf~V~~~---------~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~-a~h   82 (169)
                      .+--..+..|.+|+.+         .+++....+   .+.+..+.+++++|        +...+||||+|++..|. ++|
T Consensus       218 Tvld~l~~aG~~V~~VGki~DiF~g~Glt~a~~~---~~~~~~~~~~l~aL--------~~~~~~lif~nl~d~D~~~GH  286 (381)
T TIGR01696       218 TVLQKLKDEGHDVISIGKIADIYDGEGITKKVRT---TSNMDGMDATIKEM--------KEDFTGISFTNLVDFDALWGH  286 (381)
T ss_pred             CHHHHHHHCCCeEEEEccHHhEecCCCcccccCC---CCHHHHHHHHHHHH--------hcCCCCEEEEEeCCCccccCC
Confidence            3444455666666554         344443333   26788899999999        22348999999999995 799


Q ss_pred             CCCcccccC-hHHHHHHHHHHHHhcCCc
Q 030913           83 DKGKAVAHD-LEYINALVRVILQMAQPA  109 (169)
Q Consensus        83 dG~~~~k~d-iE~iD~lVg~im~~a~~g  109 (169)
                      .++...+.. +|++|+.++.+++..+++
T Consensus       287 ~~d~~~y~~ale~vD~~Lg~ll~~L~~~  314 (381)
T TIGR01696       287 RRDVAGYAAALELFDRRLPELFSLLRED  314 (381)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            999999999 999999999999998764

This protein is involved in the purine and pyrimidine salvage pathway. It catalyzes the conversion of D-ribose 1-phosphate to D-ribose 5-phosphate and the conversion of 2-deoxy-D-ribose 1-phosphate to 2-deoxy-D-ribose 5-phosphate. The seed members of this protein are characterized deoB proteins from E.Coli and Bacillus. This model matches pfam01676 for Metalloenzyme superfamily.

>PRK05362 phosphopentomutase; Provisional

Probab=97.32  E-value=0.00063  Score=62.06  Aligned_cols=59  Identities=12%  Similarity=0.039  Sum_probs=52.9

Q ss_pred             ChhHHHHHHHHHhccccCcccc-cCcccEEEEEeccCCC-cCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 030913           42 PIDVVASELLKLLGLQRGKMEE-VSQFDLVLVHIGAGEK-TNDDKGKAVAHD-LEYINALVRVILQMAQP  108 (169)
Q Consensus        42 ~~~~~a~~al~LLGf~egk~~~-~s~fDlVFlHI~a~d~-a~hdG~~~~k~d-iE~iD~lVg~im~~a~~  108 (169)
                      +....+.++++.|        + ..++||||+|+...|. ++|.++.+.+.. +|++|+.|+.+++..++
T Consensus       260 ~~~~~~~~ale~L--------~~~~~~~fvfvn~~~~D~~~GH~~~~~~y~~ale~~D~~lg~ll~~L~~  321 (394)
T PRK05362        260 SNMDGMDATIEEM--------KEAGDNGLVFTNLVDFDSLYGHRRDVAGYAAALEEFDARLPELLAALKE  321 (394)
T ss_pred             CHHHHHHHHHHHH--------HhCCCCcEEEEecccCccccCCcCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            6788999999999        2 3478999999999998 599999999999 99999999999999875

>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Probab=97.11  E-value=0.00093  Score=62.83  Aligned_cols=68  Identities=16%  Similarity=0.252  Sum_probs=56.4

Q ss_pred             ccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 030913           33 ETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP  108 (169)
Q Consensus        33 g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~~  108 (169)
                      .+.|--..-.....+.++++.+        +..+|||||+|...+|-++|.|+.+...+ ||.+|+.||+|++..+.
T Consensus       356 ~tyd~~PeMsa~evtd~~i~~I--------~~~k~dfi~vnfan~DmvGHtg~~~a~v~AIE~vD~~LGrIl~aLke  424 (501)
T TIGR01307       356 ATYDLQPEMSAKAVTDAVLEAI--------AQGKFDLIVVNFANPDMVGHTGNFEAAIKAVEALDVCLGRIVEACKK  424 (501)
T ss_pred             CccccCCccCHHHHHHHHHHHH--------hccCCCEEEEECCCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3444333446677889999999        33569999999999999999999998888 99999999999999753

This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.

>cd00016 alkPPc Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH

Probab=94.88  E-value=0.043  Score=49.63  Aligned_cols=59  Identities=10%  Similarity=0.132  Sum_probs=50.4

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCcccEEEEEecc--CCCcCcCCCcccccC-hHHHHHHHHHHHHhcC
Q 030913           40 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA--GEKTNDDKGKAVAHD-LEYINALVRVILQMAQ  107 (169)
Q Consensus        40 ~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a--~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~  107 (169)
                      .++....+.+++++|-         +..+-.|||+..  .|.++|..+...+.+ ++.+|+.|+.+++..+
T Consensus       230 ~psL~emt~~al~~L~---------~~~~gFfl~ve~~~iD~~gH~~d~~~~~~~l~~~D~av~~~l~~l~  291 (384)
T cd00016         230 EPSLAEMTEKAIDVLS---------KNPNGFFLMVEGGRIDHAHHANDAAGALSETLAFDDAVEAALDFAK  291 (384)
T ss_pred             CCCHHHHHHHHHHHHH---------hcCCcEEEEEeCCCCCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4688999999999991         234777777776  899999999999999 9999999999999875

Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity.

>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]

Probab=88.62  E-value=1  Score=43.13  Aligned_cols=88  Identities=13%  Similarity=0.187  Sum_probs=67.2

Q ss_pred             cccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcCCcc
Q 030913           32 IETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQPAT  110 (169)
Q Consensus        32 ~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~~gs  110 (169)
                      +.++|.--+-..-.+..++++.+        +.-.||++.++-.-+|-.+|-|+++..++ +|-+|+-||+|.+..    
T Consensus       362 VaTYDl~PEMSa~evtd~~~~~i--------~~g~~D~iV~N~ANpDMVGHTG~~eatiKAvEavD~~lg~ivd~~----  429 (509)
T COG0696         362 VATYDLKPEMSAKEVTDALVEAI--------EKGKYDLIVLNYANPDMVGHTGNFEATIKAVEAVDECLGRIVDAV----  429 (509)
T ss_pred             ccccccCcccchHHHHHHHHHHH--------hCCCCCEEEEecCCCccCcccccHHHHHHHHHHHHHHHHHHHHHH----
Confidence            34555543445567778888888        33458999999999999999999999999 999999999999984    


Q ss_pred             cccceeEEEEEEeeccccccCC
Q 030913          111 EVGSRLHLSVVLSYGQVLEADN  132 (169)
Q Consensus       111 ~i~srlhlsvvlsYG~~~~~~~  132 (169)
                       ..-.-++-+.---|++-.--+
T Consensus       430 -~~~gg~~~iTaDHGNaE~m~d  450 (509)
T COG0696         430 -KKNGGTLLITADHGNAEQMSD  450 (509)
T ss_pred             -HhcCCeEEEeecCcchhhccC
Confidence             334456666666777765443

>KOG4513 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]

Probab=88.32  E-value=0.9  Score=42.99  Aligned_cols=78  Identities=14%  Similarity=0.081  Sum_probs=62.7

Q ss_pred             ChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcCCcccccceeEEEE
Q 030913           42 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQPATEVGSRLHLSV  120 (169)
Q Consensus        42 ~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~~gs~i~srlhlsv  120 (169)
                      .+..+|.++...+        +...||+|-+++..+|-.+|-|+++..+- .|--|..||.|.++-+-     -+--|+|
T Consensus       388 ~a~eva~ka~~~i--------e~G~~p~v~vNlappDMVGHTG~~EAtv~AcEatD~aig~Iy~A~~~-----~~y~lvv  454 (531)
T KOG4513|consen  388 KALEVAEKARDAI--------ESGKFPQVRVNLAPPDMVGHTGDIEATVVACEATDEAIGKIYDAIEQ-----VGYILVV  454 (531)
T ss_pred             hHHHHHHHHHHHH--------HcCCCCeEEEcCCCccccCcccchhhhhhHHHHHHHHHHHHHHHHHh-----cCcEEEE
Confidence            3456777888877        66779999999999999999999999888 99999999999998432     2344667


Q ss_pred             EEeeccccccCC
Q 030913          121 VLSYGQVLEADN  132 (169)
Q Consensus       121 vlsYG~~~~~~~  132 (169)
                      ----|||-+-..
T Consensus       455 TADHGNAEkMv~  466 (531)
T KOG4513|consen  455 TADHGNAEKMVK  466 (531)
T ss_pred             EcCCCCHHHhcc
Confidence            777888866544

>PF01663 Phosphodiest: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro: IPR002591 This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase I / nucleotide pyrophosphatase (nppase)

Probab=82.97  E-value=1.6  Score=36.30  Aligned_cols=66  Identities=11%  Similarity=0.115  Sum_probs=45.2

Q ss_pred             ccCcccEEEEEeccCCCcCcC-CC--cccccChHHHHHHHHHHHHhcCCcccccceeEEEEEEeeccccc
Q 030913           63 EVSQFDLVLVHIGAGEKTNDD-KG--KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLE  129 (169)
Q Consensus        63 ~~s~fDlVFlHI~a~d~a~hd-G~--~~~k~diE~iD~lVg~im~~a~~gs~i~srlhlsvvlsYG~~~~  129 (169)
                      +..++||+++|+...|..+|. |.  .+...-+.++|..|+.+++..++- ....+..+.|+=-.|-..-
T Consensus       180 ~~~~pdl~~~~~~~~D~~~H~~g~~s~~~~~~~~~~D~~ig~l~~~l~~~-~~~~~~~iiv~SDHG~~~~  248 (365)
T PF01663_consen  180 QKERPDLIFVYFPEPDHIGHRYGPDSPEIEDAYRRIDQAIGRLLEALDEN-GLLEDTNIIVTSDHGMTPV  248 (365)
T ss_dssp             HTTTESEEEEEEECCHHHHHHH-TTSHHHHHHHHHHHHHHHHHHHHHHHT-T-TTTEEEEEEES---EEE
T ss_pred             hhCCCCEEEEEecCCCccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhh-CCCCceEEEEEccCccccc
Confidence            446699999999999999992 22  222223999999999999996643 2334577777777777666

These enzymes catalyse the cleavage of phosphodiester and phosphosulphate bonds in NAD, deoxynucleotides and nucleotide sugars []. Another member of this family is ATX an autotaxin, tumor cell motility-stimulating protein which exhibits type I phosphodiesterases activity []. The alignment encompasses the active site [, ]. Also present within this family is 60 kDa Ca2+-ATPase from Myroides odoratus []. This signature also hits a number of ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis.; GO: 0003824 catalytic activity; PDB: 2XRG_A 2XR9_A 3T02_A 3T01_A 3SZZ_A 3SZY_A 3T00_A 3NKM_A 3NKN_A 3NKR_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	169
3kd8_A	399	2,3-bisphosphoglycerate-independent phosphoglycera	99.66
2zkt_A	412	2,3-bisphosphoglycerate-independent phosphoglycer	99.19
3igz_B	561	Cofactor-independent phosphoglycerate mutase; glyc	97.64
2i09_A	403	Phosphopentomutase; structural genomics, target T1	97.59
3ot9_A	399	Phosphopentomutase; alkaline phosphatase like core	97.53
1o98_A	511	2,3-bisphosphoglycerate-independent phosphoglycera	96.72
1zed_A	484	Alkaline phosphatase; phosphoserine, substrate ana	96.23
3tg0_A	449	Apase, alkaline phosphatase; hydrolase; 1.20A {Esc	93.83
2w0y_A	473	APH, alkaline phosphatase; hydrolase, halophilic;	85.39

>3kd8_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; structural genomics, PSI-2, protein genomics, MCSG, glycolysis isomerase; 2.60A {Thermoplasma acidophilum} PDB: 3idd_A

Probab=99.66  E-value=3.5e-17  Score=145.71  Aligned_cols=93  Identities=20%  Similarity=0.223  Sum_probs=77.5

Q ss_pred             CCceeEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcC
Q 030913            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (169)
Q Consensus         2 GmKAA~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~   81 (169)
                      |+|+|+|++.++++|+|+.+||+++.++++||..++    +|++|+.+++++|          ++|||||+|++..|.++
T Consensus       240 gl~~~~Ia~~~l~~GLa~~aGm~~~~vpgatg~~dt----~~~~k~~~~i~~l----------~~~d~v~~n~~~~D~~G  305 (399)
T 3kd8_A          240 RMKGACVVGSPWLKGLCRLLRMDVFDVPGATGTVGS----NYRGKIEKAVDLT----------SSHDFVLVNIKATDVAG  305 (399)
T ss_dssp             SSCEEEECCCHHHHHHHHHTTCEEECCCC------C----CHHHHHHHHHHHT----------TTCSEEEEEEECC----
T ss_pred             CCcceEEecchHHHHHHHhCCCeeeeccCcCCCccc----cHHHHHHHHHHHH----------hhCCEEEEEecCcchhh
Confidence            789999999999999999999999999999999999    9999999999999          77999999999999999


Q ss_pred             cCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 030913           82 DDKGKAVAHD-LEYINALVRVILQMAQPA  109 (169)
Q Consensus        82 hdG~~~~k~d-iE~iD~lVg~im~~a~~g  109 (169)
                      |.|+++.|+. ||.+|+.|++|++ .+++
T Consensus       306 H~gd~~~~~~aie~~D~~l~~i~~-l~~~  333 (399)
T 3kd8_A          306 HDGNYPLKRDVIEDIDRAMEPLKS-IGDH  333 (399)
T ss_dssp             --CCHHHHHHHHHHHHHTTGGGGS-CTTT
T ss_pred             hccCHHHHHHHHHHHHHHHHHHHc-cCCC
Confidence            9999999999 9999999999998 6643

>2zkt_A 2,3-bisphosphoglycerate-independent phosphoglycer mutase; phosphonopyruvate decarboxylase, isomerase, structural genom NPPSFA; 2.40A {Pyrococcus horikoshii}

Probab=99.19  E-value=1.9e-11  Score=108.26  Aligned_cols=94  Identities=17%  Similarity=0.277  Sum_probs=89.0

Q ss_pred             CCceeEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcC
Q 030913            2 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN   81 (169)
Q Consensus         2 GmKAA~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~   81 (169)
                      +.++++|+..++++|+|+.+||+++..+++++..++    +++.++.++++.|          +.|||||+|+...|.++
T Consensus       243 ~~~~~~Va~~~l~~Gigk~~gmd~~~~~g~t~~~~~----~~~~~~~~~~~~l----------~~~d~v~v~~~~~D~~G  308 (412)
T 2zkt_A          243 KVKAAGVIAVALVKGVARAVGFDVYTPEGATGEYNT----NEMAKAKKAVELL----------KDYDFVFLHFKPTDAAG  308 (412)
T ss_dssp             TCCEEEECCSHHHHHHHHHTTCEEECCTTCCSSTTC----CHHHHHHHHHHHH----------HHCSEEEEEECHHHHHH
T ss_pred             CcCcceEeeccccchhhhhcccceeeccCccCCCCC----CHHHHHHHHHHHh----------cCCCEEEEcCccCChHH
Confidence            678999999999999999999999999999999998    9999999999999          57999999999999999


Q ss_pred             cCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 030913           82 DDKGKAVAHD-LEYINALVRVILQMAQPA  109 (169)
Q Consensus        82 hdG~~~~k~d-iE~iD~lVg~im~~a~~g  109 (169)
                      |.|+.+.+.. ||++|+.|++++++.+..
T Consensus       309 H~~d~~~~~~aie~~D~~lg~ll~al~~~  337 (412)
T 2zkt_A          309 HDNKPKLKAELIERADRMIGYILDHVDLE  337 (412)
T ss_dssp             HTTCHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred             HcCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999 999999999999987763

>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A

Probab=97.64  E-value=1.6e-05  Score=74.15  Aligned_cols=61  Identities=7%  Similarity=0.167  Sum_probs=54.9

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 030913           40 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP  108 (169)
Q Consensus        40 ~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~~  108 (169)
                      .-++..++.++++.|        +..+|||||+|+..+|.++|.|+.+.+.. ||++|+.||+|++..+.
T Consensus       395 emsa~ev~d~~i~al--------~~~~~DfI~vn~an~DmvGHtGd~~a~~kAIE~vD~~LGrIl~aL~e  456 (561)
T 3igz_B          395 RMQSAAITEAAIEAL--------KSGMYNVVRINFPNGDMVGHTGDLKATITGVEAVDESLAKLKDAVDS  456 (561)
T ss_dssp             TTTHHHHHHHHHHHH--------HHSCCSEEEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHH--------HhCCCCEEEEecCChhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            347889999999999        44679999999999999999999999999 99999999999998654

>2i09_A Phosphopentomutase; structural genomics, target T1865, NYSGXRC, PSI, protein structure initiative; 2.00A {Streptococcus mutans} PDB: 3m7v_A

Probab=97.59  E-value=3.1e-05  Score=69.50  Aligned_cols=87  Identities=8%  Similarity=0.064  Sum_probs=66.0

Q ss_pred             chhhhhhhhhcceeeecC---------cccccC-CCCCCCChhHHHHHHHHHhccccCccccc-Ccc-cEEEEEeccCCC
Q 030913           12 SRLKSFGDKLGFATLQLN---------ELIETS-DSLSGSPIDVVASELLKLLGLQRGKMEEV-SQF-DLVLVHIGAGEK   79 (169)
Q Consensus        12 ~liksfg~~lGf~V~~~~---------~l~g~~-ds~~~~~~~~~a~~al~LLGf~egk~~~~-s~f-DlVFlHI~a~d~   79 (169)
                      +.+--..+..|.+|+.+.         |++... .+   .+.+..+.++++.|        +. ..+ ||||+|+...|.
T Consensus       231 pTvld~L~~aG~~V~~VGKi~Dif~g~GiT~~~~~~---~~~~e~~d~~i~~l--------~~~~~~~dfi~vn~~~~Dm  299 (403)
T 2i09_A          231 PTVLNKLADAGVSTYAVGKINDIFNGSGITNDMGHN---KSNSHGVDTLIKTM--------GLSAFTKGFSFTNLVDFDA  299 (403)
T ss_dssp             CCHHHHHHHTTCEEEEETTHHHHTTTTTCSEECCCC---SSHHHHHHHHHHHH--------HCSSCCSEEEEEEECHHHH
T ss_pred             CCHHHHHHHCCCeEEEEcchHHeecCCCccccccCC---CCHHHHHHHHHHHH--------HhcCCCCCEEEEEeccCCc
Confidence            344444566677666553         343333 33   25577899999999        33 346 999999999996


Q ss_pred             -cCcCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 030913           80 -TNDDKGKAVAHD-LEYINALVRVILQMAQPA  109 (169)
Q Consensus        80 -a~hdG~~~~k~d-iE~iD~lVg~im~~a~~g  109 (169)
                       ++|.|+.+.+.. ||++|+.||+|++..+++
T Consensus       300 ~~GH~~d~~~y~~aIe~vD~~LG~Il~aL~~~  331 (403)
T 2i09_A          300 LYGHRRNAHGYRDCLHEFDERLPEIIAAMKVD  331 (403)
T ss_dssp             HTTTTTCHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred             ccCcCCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence             999999999999 999999999999998864

>3ot9_A Phosphopentomutase; alkaline phosphatase like core domain, R phosphate, ribose-1-phosphate, glucose-1,6-bisphosphate, PH transfer, isomerase; HET: TPO G16; 1.75A {Bacillus cereus} PDB: 3m8y_A* 3m8w_A* 3m8z_A* 3twz_A* 3tx0_A 3uo0_A* 3un2_A 3un3_A* 3un5_A 3uny_A

Probab=97.53  E-value=0.00011  Score=65.89  Aligned_cols=87  Identities=7%  Similarity=0.043  Sum_probs=67.7

Q ss_pred             chhhhhhhhhcceeeecC---------cccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCC-cC
Q 030913           12 SRLKSFGDKLGFATLQLN---------ELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK-TN   81 (169)
Q Consensus        12 ~liksfg~~lGf~V~~~~---------~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~-a~   81 (169)
                      +.+--..+..|.+|+.+.         |++....+   .+....+.++++.|        +...+||||+|+...|. ++
T Consensus       227 pTvld~L~~aG~~v~~VGKi~Dif~g~Git~~~~~---~~~~~~~d~~i~~L--------~~~~~dfv~vn~~~~D~~~G  295 (399)
T 3ot9_A          227 RTVMNELKDSDYDVIAIGKISDIYDGEGVTESLRT---KSNMDGMDKLVDTL--------NMDFTGLSFLNLVDFDALFG  295 (399)
T ss_dssp             CCHHHHHHHTTCEEEEETTHHHHTTTTTCSEEECC---SSHHHHHHHHHHHH--------TSCCSEEEEEEECHHHHHTT
T ss_pred             CCHHHHHHHcCCeEEEeccHHheecCCCccceecc---CChHHHHHHHHHHH--------HhCCCCEEEEEecCCccccc
Confidence            445555567777777663         33322222   35678899999999        33468999999999999 99


Q ss_pred             cCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 030913           82 DDKGKAVAHD-LEYINALVRVILQMAQPA  109 (169)
Q Consensus        82 hdG~~~~k~d-iE~iD~lVg~im~~a~~g  109 (169)
                      |.++...... +|++|+.||+|++..++.
T Consensus       296 H~~~~~~Y~~aIe~vD~~IGrIL~~L~e~  324 (399)
T 3ot9_A          296 HRRDPQGYGEALQEYDARLPEVFAKLKED  324 (399)
T ss_dssp             TTTCHHHHHHHHHHHHTTHHHHHHHCCTT
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            9999999998 999999999999998863

>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A

Probab=96.72  E-value=0.0017  Score=59.59  Aligned_cols=99  Identities=14%  Similarity=0.174  Sum_probs=68.3

Q ss_pred             CCceeEeecCchhhhhhh---------hhcceeeecC-cccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEE
Q 030913            2 GLKAALITTNSRLKSFGD---------KLGFATLQLN-ELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVL   71 (169)
Q Consensus         2 GmKAA~Vt~~~liksfg~---------~lGf~V~~~~-~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVF   71 (169)
                      |++.+.|+..+....+.-         ..|++.+..+ ..++..|....-+.+..+.++++.|        +..++||+|
T Consensus       325 Gy~~~~IaetekyahvtfF~nGg~~~~~~G~dr~l~~sp~v~tYDl~p~ms~~ev~d~ai~~L--------~~~kpdfi~  396 (511)
T 1o98_A          325 GLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVTDALLKEI--------EADKYDAII  396 (511)
T ss_dssp             TCCEEEEEEGGGHHHHTTTTTTSCCSCCTTEEEEEECCCSCSSGGGSTTTTHHHHHHHHHHHH--------HTTCCSEEE
T ss_pred             CCcEEEEecccccCceeeecCCCcccccCCCcceecccCcccccccCccccHHHHHHHHHHHH--------HccCCcEEE
Confidence            566666765555554433         3455432222 1133333211234567889999998        235699999


Q ss_pred             EEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 030913           72 VHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP  108 (169)
Q Consensus        72 lHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~~  108 (169)
                      +|....|..+|.++.+.... +|++|+.||++++..+.
T Consensus       397 lnf~~pD~~GH~~~~~~y~~aIe~vD~~lGrll~~Lk~  434 (511)
T 1o98_A          397 LNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILA  434 (511)
T ss_dssp             EEECHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999888888 99999999999987653

>1zed_A Alkaline phosphatase; phosphoserine, substrate analog, hydro; HET: NAG PNP; 1.57A {Homo sapiens} SCOP: c.76.1.1 PDB: 1zeb_A* 1zef_A* 2glq_A* 3mk0_A* 3mk1_A* 3mk2_A* 1ew2_A*

Probab=96.23  E-value=0.0034  Score=57.28  Aligned_cols=60  Identities=8%  Similarity=0.053  Sum_probs=54.3

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCcccEEEEEec--cCCCcCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 030913           40 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIG--AGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP  108 (169)
Q Consensus        40 ~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~--a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~~  108 (169)
                      .|+...++++++++|.         +.+|..||||+  ..|.++|+++...+.. ++.+|+.|+.+++..++
T Consensus       285 ~P~L~emt~~ai~~L~---------~~~~Gffl~veg~~iD~~gH~~d~~~~~~~~~~fD~al~~~~~~~~~  347 (484)
T 1zed_A          285 DPSLMEMTEAALRLLS---------RNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTSE  347 (484)
T ss_dssp             CCCHHHHHHHHHHHHT---------TCTTCEEEEEEETTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred             CCCHHHHHHHHHHHHH---------hcCCcEEEEecccCcchhhhcCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            5789999999999991         34899999999  7889999999999999 99999999999998765

>3tg0_A Apase, alkaline phosphatase; hydrolase; 1.20A {Escherichia coli} SCOP: c.76.1.1 PDB: 1b8j_A 1ed9_A 1ew8_A 1ew9_A 1ed8_A 1y6v_A 3bdg_B 1elx_A 2g9y_A 2ga3_A* 3bdh_A 3cmr_A 1elz_A 1hjk_A* 1hqa_A 1ely_A 3dyc_A 1ali_A 1alj_A 3bdf_A ...

Probab=93.83  E-value=0.025  Score=51.40  Aligned_cols=77  Identities=14%  Similarity=0.141  Sum_probs=59.1

Q ss_pred             CCChhHHHHHHHHHhccccCcccccCc-cc--EEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcC--Cccc--
Q 030913           40 GSPIDVVASELLKLLGLQRGKMEEVSQ-FD--LVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQ--PATE--  111 (169)
Q Consensus        40 ~~~~~~~a~~al~LLGf~egk~~~~s~-fD--lVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~--~gs~--  111 (169)
                      .|....+.+++|++|          ++ ++  |+||+-+..|.++|+++...+.. ++.+|+.|+.+++..+  |-+.  
T Consensus       296 ~PsL~eMT~kAi~~L----------~~~~~GfFl~VEg~~iD~a~H~nd~~~~~~e~~~fD~av~~a~~~~~~~~dTLii  365 (449)
T 3tg0_A          296 VPTLAQMTDKAIELL----------SKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVI  365 (449)
T ss_dssp             SCCHHHHHHHHHHHH----------TTCSSCEEEEEEETHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCHHHHHHHHHHHH----------hhCCCcEEEEEeccccchhhccCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            468899999999999          43 44  67777788999999999999999 9999999999998765  3222  


Q ss_pred             -ccceeEEEEEEeecc
Q 030913          112 -VGSRLHLSVVLSYGQ  126 (169)
Q Consensus       112 -i~srlhlsvvlsYG~  126 (169)
                       .|-+=|-..+++|+.
T Consensus       366 VTADH~~~~~~~g~~~  381 (449)
T 3tg0_A          366 VTADHAHASQIVAPDT  381 (449)
T ss_dssp             EECSSBCSCEEECTTC
T ss_pred             EeCCCCCcccccCCCC
Confidence             233444455666764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00