Citrus Sinensis ID: 030969

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MGFMDLAQGVTLTELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTFPVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTVLYLCS
Secondary Structure (PSIPRED)
cccccccccccHHHcccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHHHcccccHHHHHHHHHHHHHccccccHHEHHHEEEcHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccHHHcccccccHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcHHccHHHHEHHHHHcHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mgfmdlaqgvtltelgsssrarasLQWGGTIAALFLLLMNrtgrrshmQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVganlfypktfpvARFILFVITPawlanglregIAAGVYCLIIGVLVIITEIrgiggfrncecnlhsfsYCLGVAFLFFFTVLYLCS
Flexible Loop (DISEMBL)
MGFMDLAQGVTLTELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTFPVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTVLYLCS
Low Complexity Region (SEG)
MGFMDLAQGVTLTELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTFPVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTVLYLCS
Disordered region (IsUnstruct)
**********************ASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTFPVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTVLYLC*
Disordered Region (DISOPRED)
*************ELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTFPVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTVLYLCS
Disordered Region (DISEMBL)
MGFMDLAQGVTLTELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTFPVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTVLYLCS
Disordered Region (DISPRO)
*GFMDLAQGVTLTELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTFPVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTVLYLCS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGFMDLAQGVTLTELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTFPVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTVLYLCS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	168	2.2.26 [Sep-21-2011]
O23164	202	Cold-regulated 413 plasma	yes	no	0.886	0.737	0.348	9e-22
Q9SVL6	203	Cold-regulated 413 plasma	no	no	0.910	0.753	0.339	3e-18
Q9XIM7	197	Cold-regulated 413 plasma	no	no	0.892	0.761	0.345	3e-15
O64834	189	Cold-regulated 413 plasma	no	no	0.833	0.740	0.3	5e-13

>sp|O23164|CRPM4_ARATH Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana GN=At4g37220 PE=2 SV=2

 Score =  102 bits (255), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 6/155 (3%)

Query: 15  LGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFG 74
           LG      + LQW  +I A++LL+++RT  ++ M T LLV Y+F + P+V+F+   G FG
Sbjct: 40  LGGVGFGTSVLQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFG 99

Query: 75  CWVACLAVGANLFYPKTF------PVARFILFVITPAWLANGLREGIAAGVYCLIIGVLV 128
            W+A +A+   LF+PK F      PVA  ++ V++P+ +A  LRE     V CL+I   +
Sbjct: 100 KWIALIAIIVRLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYL 159

Query: 129 IITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTV 163
               I+  GGF+N     +  S  +G+  L  + V
Sbjct: 160 FHEHIKASGGFKNSFTQKNGISNTIGIVALLVYPV 194

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SVL6|CRPM2_ARATH Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana GN=COR413PM2 PE=2 SV=1

 Score = 91.3 bits (225), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 87/159 (54%), Gaps = 6/159 (3%)

Query: 11  TLTELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILR 70
            +++LG      + L++  + AA++LL+++RT  ++ M T+LL+ Y+F S P+V+F  L 
Sbjct: 37  DVSKLGGLGFGVSFLKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLS 96

Query: 71  GQFGCWVACLAVGANLFYPKTFPV------ARFILFVITPAWLANGLREGIAAGVYCLII 124
           G  G W+A +AV   LF+PK FP       +  +L V++P +LA+ +R      V  L I
Sbjct: 97  GDVGKWIAFVAVVLRLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFI 156

Query: 125 GVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTV 163
           G  ++   IR  GGFRN        S  LG+  L  + V
Sbjct: 157 GCYLLQEHIRASGGFRNSFTQPRGVSNTLGIILLLVYPV 195

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XIM7|CRPM1_ARATH Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana GN=COR413PM1 PE=1 SV=1

 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 15/165 (9%)

Query: 8   QGVTLTELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFK 67
              TLT LG  +   + L+W  +IAA++LL+++RT  +++M T+LL+ Y+F S P+++F 
Sbjct: 34  HAFTLTGLGFGT---SVLEWVASIAAIYLLVLDRTNWKTNMLTSLLIPYIFFSLPSLIFG 90

Query: 68  ILRGQFGCWVACLAVGANLFYPKTFPVARFILFVITPAWLANGLREGIAAGVY------- 120
           I RG+ G W+A +AV   LF+PK    AR  L +     L   +   + AG +       
Sbjct: 91  IFRGEIGKWIAFVAVVVQLFFPKH---AREYLELPVALVLLAVVAPNLIAGTFRDSWIGL 147

Query: 121 --CLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTV 163
             CL IG  ++   IR  GGFRN     +  S  +G+  L  F V
Sbjct: 148 AICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPV 192

Arabidopsis thaliana (taxid: 3702)

>sp|O64834|CRPM3_ARATH Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana GN=At2g23680 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 10/150 (6%)

Query: 25  LQWGGTIAALFLLLMNRTGRR--SHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAV 82
           L+W  +I A+FL+++++T  +  +++  +LL  YLF+S P V+F++LR   G W+A L V
Sbjct: 31  LRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLTV 90

Query: 83  GANLFYPKTF------PVARFILFVITPAWLANGLREGI--AAGVYCLIIGVLVIITEIR 134
              LF P  F      P A  +L V+TP+ +    R+ +    G  CL+    +I    +
Sbjct: 91  ILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKHTK 150

Query: 135 GIGGFRNCECNLHSFSYCLGVAFLFFFTVL 164
             GG +N        +Y + +  LF + +L
Sbjct: 151 ACGGIKNSFTQKDKVTYSICLWILFVYPIL 180

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
224096898	176	predicted protein [Populus trichocarpa]	0.892	0.852	0.62	4e-48
225430868	190	PREDICTED: uncharacterized protein LOC10	0.892	0.789	0.626	7e-48
225468763	202	PREDICTED: uncharacterized protein LOC10	0.898	0.747	0.375	8e-22
449448542	202	PREDICTED: cold-regulated 413 plasma mem	0.898	0.747	0.388	1e-21
157849744	197	cold regulated 413 plasma membrane 1 [Br	0.946	0.807	0.346	4e-21
449455212	202	PREDICTED: cold-regulated 413 plasma mem	0.892	0.742	0.371	8e-21
166359606	203	stress responsive protein [Eutrema halop	0.827	0.684	0.386	3e-20
15235477	202	cold acclimation protein WCOR413 [Arabid	0.886	0.737	0.348	4e-20
46577796	204	putative stress-responsive protein [Tama	0.892	0.735	0.358	6e-20
297798196	202	hypothetical protein ARALYDRAFT_912666 [	0.827	0.688	0.358	6e-20

>gi|224096898|ref|XP_002310778.1| predicted protein [Populus trichocarpa] gi|222853681|gb|EEE91228.1| predicted protein [Populus trichocarpa]

 Score =  195 bits (496), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 93/150 (62%), Positives = 117/150 (78%)

Query: 18  SSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWV 77
           SS ARAS QWGGTI  +FLL++NR GR+S +QT LLV YL TSFPTVLFK++RGQFG W+
Sbjct: 23  SSWARASFQWGGTIFTIFLLILNRVGRKSSVQTTLLVFYLLTSFPTVLFKVVRGQFGYWI 82

Query: 78  ACLAVGANLFYPKTFPVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIG 137
           A LA+ ANLF+P+TFPV+RFILFVI+P  L +GLR  IA  ++CL+IG+  +I EIR I 
Sbjct: 83  AFLAIAANLFFPETFPVSRFILFVISPDRLVDGLRNSIAGAIFCLLIGISSVIMEIREIA 142

Query: 138 GFRNCECNLHSFSYCLGVAFLFFFTVLYLC 167
           G R  EC+   + YCL ++FLFFFT+ YLC
Sbjct: 143 GNRILECSFLCWGYCLAISFLFFFTIKYLC 172

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430868|ref|XP_002269366.1| PREDICTED: uncharacterized protein LOC100247855 [Vitis vinifera] gi|297735220|emb|CBI17582.3| unnamed protein product [Vitis vinifera]

 Score =  195 bits (495), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 94/150 (62%), Positives = 119/150 (79%)

Query: 18  SSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWV 77
           ++  RA+ QWGGTI+A FLL++N+ GRRS +Q++LLVL+L TSFP VLF I+RGQ G W 
Sbjct: 37  TTGGRAAFQWGGTISATFLLILNQVGRRSSIQSSLLVLFLLTSFPAVLFNIVRGQIGRWF 96

Query: 78  ACLAVGANLFYPKTFPVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIG 137
           A LAV ANLF+P+ FPVA FIL V TP WLANGLR+ I  GV+CL++GV ++ITEIRGIG
Sbjct: 97  AFLAVAANLFFPRKFPVAGFILLVATPDWLANGLRDSIVGGVFCLLLGVCLVITEIRGIG 156

Query: 138 GFRNCECNLHSFSYCLGVAFLFFFTVLYLC 167
           G   CECNL  F + + ++FLFFFT+LYLC
Sbjct: 157 GCSRCECNLLCFGFSVCISFLFFFTILYLC 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225468763|ref|XP_002274881.1| PREDICTED: uncharacterized protein LOC100267774 [Vitis vinifera] gi|298205064|emb|CBI38360.3| unnamed protein product [Vitis vinifera]

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 92/157 (58%), Gaps = 6/157 (3%)

Query: 13  TELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQ 72
           ++LGS     + L+W  + +A++LL+++RT  R++M T+LLV Y+F S P VLF +LRG+
Sbjct: 38  SKLGSLGFGTSFLKWVASFSAIYLLILDRTNWRTNMLTSLLVPYIFFSLPPVLFNLLRGE 97

Query: 73  FGCWVACLAVGANLFYPKTFPV------ARFILFVITPAWLANGLREGIAAGVYCLIIGV 126
            G W+A +A+   LF+P+ FP       +  +L V+ P + A+ LR  +   V CL+IG 
Sbjct: 98  VGKWIAFIAIVLRLFFPRHFPDWLEMPGSLILLLVVAPNFFAHTLRGSLIGTVICLLIGC 157

Query: 127 LVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTV 163
            ++   IR  GGFRN     H  S  LG+  L  + V
Sbjct: 158 YLLQEHIRASGGFRNSFTRSHGISNTLGIILLLVYPV 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448542|ref|XP_004142025.1| PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis sativus] gi|449497763|ref|XP_004160511.1| PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis sativus]

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 6/157 (3%)

Query: 13  TELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQ 72
           T+LG      +  +W  + AA++LL+++RT  R++M T+LLV Y+F S P  +F +LRG 
Sbjct: 38  TKLGGKGLGTSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPQGIFNLLRGD 97

Query: 73  FGCWVACLAVGANLFYPKTFPV------ARFILFVITPAWLANGLREGIAAGVYCLIIGV 126
            G W+A +AV   LF+P+ FP       +  +L V TP + A+ LR+  A  V CLIIG 
Sbjct: 98  AGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVVICLIIGC 157

Query: 127 LVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTV 163
            ++   IR  GGFRN     H  S  +G+  L  F V
Sbjct: 158 YLLQEHIRASGGFRNSLTQTHGISNTIGIILLLVFPV 194

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157849744|gb|ABV89655.1| cold regulated 413 plasma membrane 1 [Brassica rapa]

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 20/179 (11%)

Query: 9   GVTLTELGSSSRARAS--------------LQWGGTIAALFLLLMNRTGRRSHMQTNLLV 54
           G  L EL ++++  A+              L+W  +IAA++LL+++RT  +++M T+LL+
Sbjct: 18  GSDLNELATAAKNLANHTLMLTGLGFGTSILEWIASIAAIYLLVLDRTNWKTNMLTSLLI 77

Query: 55  LYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTF------PVARFILFVITPAWLA 108
            Y+F S P+V+F + RG  G W+A +AV   LF+PK F      P A  +L V+ P  +A
Sbjct: 78  PYIFFSLPSVIFGLFRGDVGKWIAFVAVVVQLFFPKHFREWFELPAALILLIVVAPGLIA 137

Query: 109 NGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTVLYLC 167
              R+     V CL+IG  ++   IR  GGFRN     H  S  LG+  L  F +  L 
Sbjct: 138 GTFRDNWVGLVVCLLIGCYLLQEHIRASGGFRNAFTKAHGISNTLGIIALVVFPIWALA 196

Source: Brassica rapa

Species: Brassica rapa

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455212|ref|XP_004145347.1| PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis sativus] gi|449474966|ref|XP_004154334.1| PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis sativus] gi|449502386|ref|XP_004161626.1| PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis sativus]

 Score =  105 bits (261), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 6/156 (3%)

Query: 14  ELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQF 73
           +LG+S    + LQW  + AA++LL+++RT  ++++ T+LL+ Y+F S P V+F   RG+F
Sbjct: 39  KLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEF 98

Query: 74  GCWVACLAVGANLFYPKTFPV------ARFILFVITPAWLANGLREGIAAGVYCLIIGVL 127
           G WVA +AV   LF+P+ FP       A  +L V+ P+  A  +R        CLII   
Sbjct: 99  GKWVAVIAVVLRLFFPRRFPDWLELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCY 158

Query: 128 VIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTV 163
           ++   IR  GGFRN     +  S  +G+  LF F V
Sbjct: 159 LLQEHIRASGGFRNSFTKANGISNTIGIILLFVFPV 194

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|166359606|gb|ABY86895.1| stress responsive protein [Eutrema halophilum]

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 81/145 (55%), Gaps = 6/145 (4%)

Query: 25  LQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGA 84
           LQW  +I+A++LL+++RT  R+ M T LLV Y+F + P V+F  LRG FG W+A +AV  
Sbjct: 51  LQWAASISAIYLLILDRTNWRTKMLTTLLVPYIFFTLPFVIFNFLRGDFGKWIALIAVTI 110

Query: 85  NLFYPKTFPV------ARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGG 138
            LF PK FP       A  +L V+ P+ +A  LRE     V CL+I   +    I+  GG
Sbjct: 111 RLFCPKHFPDWLEIPGALVLLLVVAPSLIAGTLRESWVGAVICLVIACYLFHEHIKASGG 170

Query: 139 FRNCECNLHSFSYCLGVAFLFFFTV 163
           F+N     +  S  +G+  L  + V
Sbjct: 171 FKNSFTQKNGISNTIGIVALLVYPV 195

Source: Eutrema halophilum

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235477|ref|NP_195439.1| cold acclimation protein WCOR413 [Arabidopsis thaliana] gi|75097744|sp|O23164.2|CRPM4_ARATH RecName: Full=Cold-regulated 413 plasma membrane protein 4; Short=AtCOR413-PM4 gi|4006858|emb|CAB16776.1| cold acclimation protein homolog [Arabidopsis thaliana] gi|7270705|emb|CAB80388.1| cold acclimation protein homolog [Arabidopsis thaliana] gi|26449889|dbj|BAC42066.1| putative ap2 cold acclimation protein [Arabidopsis thaliana] gi|28973359|gb|AAO64004.1| putative cold acclimation protein homolog [Arabidopsis thaliana] gi|332661369|gb|AEE86769.1| cold acclimation protein WCOR413 [Arabidopsis thaliana]

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 6/155 (3%)

Query: 15  LGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFG 74
           LG      + LQW  +I A++LL+++RT  ++ M T LLV Y+F + P+V+F+   G FG
Sbjct: 40  LGGVGFGTSVLQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFG 99

Query: 75  CWVACLAVGANLFYPKTF------PVARFILFVITPAWLANGLREGIAAGVYCLIIGVLV 128
            W+A +A+   LF+PK F      PVA  ++ V++P+ +A  LRE     V CL+I   +
Sbjct: 100 KWIALIAIIVRLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYL 159

Query: 129 IITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTV 163
               I+  GGF+N     +  S  +G+  L  + V
Sbjct: 160 FHEHIKASGGFKNSFTQKNGISNTIGIVALLVYPV 194

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|46577796|gb|AAT01418.1| putative stress-responsive protein [Tamarix androssowii]

 Score =  102 bits (254), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 6/156 (3%)

Query: 14  ELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQF 73
           +LGS     + LQW  + AA++LL+++RT  R+++ T LLV Y+F S P+VLF   RG  
Sbjct: 41  KLGSLGFGTSFLQWVASFAAIYLLILDRTNWRTNILTGLLVPYIFFSLPSVLFSFFRGDV 100

Query: 74  GCWVACLAVGANLFYPKTF------PVARFILFVITPAWLANGLREGIAAGVYCLIIGVL 127
           G W+A +A+   LF+P  F      P A  ++ V+ P+  A+ +R+       CL+IG  
Sbjct: 101 GRWIAFIAIILRLFFPTRFPDWLEAPAALILIIVVAPSLFASTVRDDWIGAAICLVIGCY 160

Query: 128 VIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTV 163
           ++   IR  GGFRN     H  S  +G+  L  + V
Sbjct: 161 LLQEHIRASGGFRNSFTRPHGVSNTIGIILLLVYPV 196

Source: Tamarix androssowii

Species: Tamarix androssowii

Genus: Tamarix

Family: Tamaricaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798196|ref|XP_002866982.1| hypothetical protein ARALYDRAFT_912666 [Arabidopsis lyrata subsp. lyrata] gi|297312818|gb|EFH43241.1| hypothetical protein ARALYDRAFT_912666 [Arabidopsis lyrata subsp. lyrata]

 Score =  102 bits (254), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 6/145 (4%)

Query: 25  LQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGA 84
           LQW  +I+A++LL+++RT  R+ M T LLV Y+F + P+V+F+   G FG W+A +A+  
Sbjct: 50  LQWAASISAIYLLILDRTNWRTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAITI 109

Query: 85  NLFYPKTF------PVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGG 138
            LF+PK F      P    +L V+ P+ +A  LRE     V CL+I   +    I+  GG
Sbjct: 110 RLFFPKEFPDWLEIPAGLILLIVVAPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 139 FRNCECNLHSFSYCLGVAFLFFFTV 163
           F+N     +  S  +G+  L  + V
Sbjct: 170 FKNSFTQKNGISNTIGIVALLVYPV 194

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
TAIR|locus:2115010	202	AT4G37220 "AT4G37220" [Arabido	0.886	0.737	0.348	3.4e-22
TAIR|locus:2044641	197	COR413-PM1 "AT2G15970" [Arabid	0.892	0.761	0.371	1.1e-21
TAIR|locus:2077982	203	COR413-PM2 "AT3G50830" [Arabid	0.904	0.748	0.341	5.1e-19
TAIR|locus:2049003	189	AT2G23680 "AT2G23680" [Arabido	0.803	0.714	0.306	2.3e-14
TAIR|locus:505006154	225	COR413IM1 "AT1G29395" [Arabido	0.517	0.386	0.319	0.00025

TAIR|locus:2115010 AT4G37220 "AT4G37220" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 54/155 (34%), Positives = 86/155 (55%)

Query:    15 LGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFG 74
             LG      + LQW  +I A++LL+++RT  ++ M T LLV Y+F + P+V+F+   G FG
Sbjct:    40 LGGVGFGTSVLQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFG 99

Query:    75 CWVACLAVGANLFYPKTFP------VARFILFVITPAWLANGLREGIAAGVYCLIIGVLV 128
              W+A +A+   LF+PK FP      VA  ++ V++P+ +A  LRE     V CL+I   +
Sbjct:   100 KWIALIAIIVRLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYL 159

Query:   129 IITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTV 163
                 I+  GGF+N     +  S  +G+  L  + V
Sbjct:   160 FHEHIKASGGFKNSFTQKNGISNTIGIVALLVYPV 194

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009744 "response to sucrose stimulus" evidence=IEP;RCA

GO:0009749 "response to glucose stimulus" evidence=IEP

GO:0009750 "response to fructose stimulus" evidence=IEP;RCA

TAIR|locus:2044641 COR413-PM1 "AT2G15970" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 59/159 (37%), Positives = 89/159 (55%)

Query:    11 TLTELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILR 70
             TLT LG  +     L+W  +IAA++LL+++RT  +++M T+LL+ Y+F S P+++F I R
Sbjct:    37 TLTGLGFGTSV---LEWVASIAAIYLLVLDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFR 93

Query:    71 GQFGCWVACLAVGANLFYPK------TFPVARFILFVITPAWLANGLREGIAAGVYCLII 124
             G+ G W+A +AV   LF+PK        PVA  +L V+ P  +A   R+       CL I
Sbjct:    94 GEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNLIAGTFRDSWIGLAICLGI 153

Query:   125 GVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTV 163
             G  ++   IR  GGFRN     +  S  +G+  L  F V
Sbjct:   154 GCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPV 192

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISS

GO:0009631 "cold acclimation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0042631 "cellular response to water deprivation" evidence=IEP;RCA

GO:0005773 "vacuole" evidence=IDA

GO:0009269 "response to desiccation" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

TAIR|locus:2077982 COR413-PM2 "AT3G50830" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 54/158 (34%), Positives = 87/158 (55%)

Query:    12 LTELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRG 71
             +++LG      + L++  + AA++LL+++RT  ++ M T+LL+ Y+F S P+V+F  L G
Sbjct:    38 VSKLGGLGFGVSFLKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSG 97

Query:    72 QFGCWVACLAVGANLFYPKTFPV------ARFILFVITPAWLANGLREGIAAGVYCLIIG 125
               G W+A +AV   LF+PK FP       +  +L V++P +LA+ +R      V  L IG
Sbjct:    98 DVGKWIAFVAVVLRLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIG 157

Query:   126 VLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLFFFTV 163
               ++   IR  GGFRN        S  LG+  L  + V
Sbjct:   158 CYLLQEHIRASGGFRNSFTQPRGVSNTLGIILLLVYPV 195

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISS

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2049003 AT2G23680 "AT2G23680" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 45/147 (30%), Positives = 80/147 (54%)

Query:    25 LQWGGTIAALFLLLMNRTGRR--SHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAV 82
             L+W  +I A+FL+++++T  +  +++  +LL  YLF+S P V+F++LR   G W+A L V
Sbjct:    31 LRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLTV 90

Query:    83 GANLFYPKTF------PVARFILFVITPAWLANGLREGI--AAGVYCLIIGVLVIITEIR 134
                LF P  F      P A  +L V+TP+ +    R+ +    G  CL+    +I    +
Sbjct:    91 ILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKHTK 150

Query:   135 GIGGFRNC--ECNLHSFSYCLGVAFLF 159
               GG +N   + +  ++S CL + F++
Sbjct:   151 ACGGIKNSFTQKDKVTYSICLWILFVY 177

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009625 "response to insect" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0051707 "response to other organism" evidence=RCA

TAIR|locus:505006154 COR413IM1 "AT1G29395" [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 0.00025, P = 0.00025
 Identities = 31/97 (31%), Positives = 48/97 (49%)

Query:    24 SLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVG 83
             SLQW  TI+ L L+L   TG    +   L  L+     P+ +   ++G++G W A LA+ 
Sbjct:    84 SLQWISTISCLALMLARGTGIHKSVVVPLFALHA----PSSIVAWIKGEYGVWAAFLALI 139

Query:    84 ANLFY--PKTF--PVARFILFVITPAWLAN--GLREG 114
             A LF+  P     P    +L ++ P  + N  G +EG
Sbjct:   140 ARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQEG 176


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.334   0.146   0.474    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      168       168   0.00079  108 3  11 21  0.38    31
                                                     31  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  146 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.74u 0.14s 13.88t   Elapsed:  00:00:01
  Total cpu time:  13.74u 0.14s 13.88t   Elapsed:  00:00:01
  Start:  Fri May 10 06:10:46 2013   End:  Fri May 10 06:10:47 2013

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=ISS;IDA

GO:0009631 "cold acclimation" evidence=IEP;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0042631 "cellular response to water deprivation" evidence=IEP;RCA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0031357 "integral to chloroplast inner membrane" evidence=IDA

GO:0070417 "cellular response to cold" evidence=IEP

GO:0009269 "response to desiccation" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00071025 hypothetical protein (176 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	168
pfam05562	186	pfam05562, WCOR413, Cold acclimation protein WCOR4	2e-23

>gnl|CDD|191305 pfam05562, WCOR413, Cold acclimation protein WCOR413

 Score = 90.5 bits (225), Expect = 2e-23
 Identities = 52/133 (39%), Positives = 80/133 (60%), Gaps = 6/133 (4%)

Query: 15  LGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFG 74
           LG        LQW  +IAA++LL+++RT  ++++ T+LLV Y+F S P+V+F  +RG+ G
Sbjct: 36  LGGLGFGTTFLQWLASIAAIYLLILDRTNWKTNILTSLLVPYIFLSLPSVIFSWIRGEVG 95

Query: 75  CWVACLAVGANLFYPKTFP------VARFILFVITPAWLANGLREGIAAGVYCLIIGVLV 128
            W+A +AV   LF+P+ FP       A  +L V+ P+ +A+  R      V CL+IG  +
Sbjct: 96  KWIAFIAVIVRLFFPRHFPGELELPGALILLVVVAPSLIASTFRGSQIGVVICLVIGCYL 155

Query: 129 IITEIRGIGGFRN 141
           +   IR  GGFRN
Sbjct: 156 LQEHIRASGGFRN 168

This family consists of several WCOR413-like plant cold acclimation proteins. Length = 186

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	168
PF05562	187	WCOR413: Cold acclimation protein WCOR413; InterPr	100.0

>PF05562 WCOR413: Cold acclimation protein WCOR413; InterPro: IPR008892 This family consists of several WCOR413-like plant cold acclimation proteins

Probab=100.00  E-value=8.5e-73  Score=464.61  Aligned_cols=148  Identities=39%  Similarity=0.719  Sum_probs=143.4

Q ss_pred             eeecCCCccchhhHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhhccchhhHhhhccccchHHHHHHHHhhhccCCC
Q 030969           12 LTELGSSSRARASLQWGGTIAALFLLLMNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKT   91 (168)
Q Consensus        12 ~~~l~~~g~~t~~lqWiasiaAi~LLildrTnwkTni~tslLVPyi~lslP~~if~~~RGe~G~WiAFlAvv~RLFfp~~   91 (168)
                      ..+++|.|++|+++||++++||+|||++|||||||||+|||||||+|+|+|+++|||+|||||+||||+|+++|||||+|
T Consensus        34 a~~~~~~~~~t~~lqWias~aAi~LlildrtnwkTniltslLVPyi~lslPs~if~~~rGe~G~WiAFlavv~RLFfp~~  113 (187)
T PF05562_consen   34 AICLGSLGFGTSFLQWIASIAAIYLLILDRTNWKTNILTSLLVPYIFLSLPSVIFNWFRGEYGKWIAFLAVVLRLFFPRH  113 (187)
T ss_pred             eeeeccccccHHHHHHHHHHHHHHHHhccCccchhhhhHHHHHHHHHHhCcHHHHHHHhccccHHHHHHHHHHHHhCccc
Confidence            34568999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Cch------hhhhhhhcChhHHHhhhcccchhHHHHHHHHHHHHHHHHHhcCCcchhhhccCccchhhHHHHHH
Q 030969           92 FPV------ARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFLF  159 (168)
Q Consensus        92 fP~------a~iLLivvaP~~~~~~~R~~~~G~vIcL~I~~YLl~qHir~~GGfr~aF~q~~gi~~TigIi~L~  159 (168)
                      |||      +++||+||||+++||++||+|+|++|||+|||||+|||||++||+||||+|+|||+||+||++++
T Consensus       114 fP~~LElP~a~iLLivvaP~~~~~~~R~~~~G~vi~l~I~~YLl~qHi~~~Gg~r~aF~~~~gis~t~~I~ll~  187 (187)
T PF05562_consen  114 FPGELELPGALILLIVVAPSQIANTFRGSQIGAVICLAIACYLLQQHIRASGGFRNAFTQGSGISNTIGIILLF  187 (187)
T ss_pred             CCchhhcchhhheeeEeCchHHHHhccCCeeehhHHHHHHHHHHHHHHHhcCChhhhhhcccccceeeEEEEeC
Confidence            996      99999999999999999999999999999999999999999999999999999999999998753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00