Citrus Sinensis ID: 030972

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQQLRAN
Secondary Structure (PSIPRED)
ccccccccccccEEcEEEEEcccHHHHHHHHHHHcccccccccccccccEEEEEccccEEEEEEccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEEEEcccccEEEEEEEEcccccEEEEEEccccccccccccccccccccccHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccHHcccEEEEEEccHHHHHHHHHHHHcccccccccccccccEEEEccccEEEEEEccccccccccccccccccEEEEEEccHHHHHHHHHHccccEEEEEccccccEEEEEEEEcccccEEEEEcccccccccccHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mkesagnplhlksvNHVSLVCRNISESIDFYQNVLgfvpirrpgsfnfdgawlFGHGIGihllqsenpdslpkksvinpkdnhlsfqceSVGNVEKFLKEMGIKYVRALVEEGGILVEqlffhdpdgfmieicdcdnlpvvplvgdVARSCARVNSVQQMVQQQLRAN
Flexible Loop (DISEMBL)
mkesagnplhlksvNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQQLRAN
Low Complexity Region (SEG)
MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQQLRAN
Disordered region (IsUnstruct)
**********LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQ******************HLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVN*************
Disordered Region (DISOPRED)
***********KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVPLVGDV*********************
Disordered Region (DISEMBL)
********LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQQLRAN
Disordered Region (DISPRO)
*******PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQM********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQQLRAN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	168	2.2.26 [Sep-21-2011]
Q8CXK5	139	Metallothiol transferase	yes	no	0.636	0.769	0.268	0.0003
Q8ZM36	144	Virulence protein STM3117	yes	no	0.702	0.819	0.301	0.0003

>sp|Q8CXK5|FOSB_OCEIH Metallothiol transferase FosB OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=fosB PE=3 SV=2

 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 27/134 (20%)

Query: 9   LHLKSVNHVSLVCRNISESIDFYQNVLG---FVPIRRPGSFNFDGAWLFGHGIGIHLLQS 65
           +++K +NH+     N+ +SIDFYQ V      V  R    F+ +G WL           +
Sbjct: 1   MNIKGLNHLLFSVSNLEQSIDFYQQVFDAKLLVKGRSTAYFDLNGIWL-----------A 49

Query: 66  ENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRAL---VEEGGILVEQ--- 119
            N +    ++ IN    H +F      ++++   E  I++++AL   + EG    EQ   
Sbjct: 50  LNEEKHIPRNEINESYTHTAF------SIDESELESAIQHLKALNVNILEGRERAEQDKQ 103

Query: 120 -LFFHDPDGFMIEI 132
            ++F DPDG   E 
Sbjct: 104 SIYFTDPDGHKFEF 117

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.
Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) (taxid: 221109)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: -

>sp|Q8ZM36|VIR17_SALTY Virulence protein STM3117 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=STM3117 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 8/126 (6%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           +  ++H+ L   +IS +I FY+ VLGF  +    +F  +   L      I+L Q E  + 
Sbjct: 21  IDRIDHLVLTVSDISTTIRFYEEVLGFSAV----TFKQNRKALIFGAQKINLHQQEM-EF 75

Query: 71  LPKKSVINPKDNHLSFQCES-VGNVEKFLKEMGIKYVRALVEEGGILVE--QLFFHDPDG 127
            PK S   P    L F   + + +V   + + GI  V   VE  G   E   ++  DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

Query: 128 FMIEIC 133
            +IEI 
Sbjct: 136 NLIEIS 141

Is critically involved in promoting the replication of S.typhimurium cells inside host macrophages, suggesting a role in the establishment of bacterial colonization within macrophages. May be involved in the biosynthesis and modification of the peptidoglycan layer of the cell wall.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
255553127	172	lactoylglutathione lyase, putative [Rici	0.958	0.936	0.785	7e-72
317106739	172	JHL06P13.16 [Jatropha curcas]	0.958	0.936	0.754	4e-71
224054130	172	predicted protein [Populus trichocarpa]	0.970	0.947	0.774	2e-70
255636198	172	unknown [Glycine max]	0.988	0.965	0.740	2e-69
18394235	174	lactoylglutathione lyase / glyoxalase I-	0.970	0.936	0.75	2e-68
297844440	174	lactoylglutathione lyase family protein	0.970	0.936	0.75	3e-68
224070835	159	predicted protein [Populus trichocarpa]	0.934	0.987	0.759	4e-68
388506784	172	unknown [Lotus japonicus] gi|388522799|g	0.922	0.901	0.754	5e-68
449436156	169	PREDICTED: uncharacterized protein LOC10	0.904	0.899	0.782	2e-67
5902371	208	Hypothetical protein [Arabidopsis thalia	0.958	0.774	0.728	2e-67

>gi|255553127|ref|XP_002517606.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223543238|gb|EEF44770.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  274 bits (701), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 128/163 (78%), Positives = 149/163 (91%), Gaps = 2/163 (1%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
           MKE+ GNPLHLKS+NH+SL+CR++ ESIDFYQNVLGFVPIRRPGSF+FDGAWLFG GIGI
Sbjct: 1   MKENTGNPLHLKSLNHISLLCRSVEESIDFYQNVLGFVPIRRPGSFDFDGAWLFGFGIGI 60

Query: 61  HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
           HLLQSE+P+++PKKS INPKDNH+SFQCES+G VEK LKEM IKYVRA VEEGGI V+QL
Sbjct: 61  HLLQSEDPENMPKKSEINPKDNHISFQCESMGAVEKKLKEMEIKYVRATVEEGGIHVDQL 120

Query: 121 FFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQ 163
           FFHDPDGFMIEIC+CD+LPV+PL G++ARSC+RVN   QM+Q 
Sbjct: 121 FFHDPDGFMIEICNCDSLPVIPLAGEMARSCSRVNL--QMIQH 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106739|dbj|BAJ53235.1| JHL06P13.16 [Jatropha curcas]

 Score =  272 bits (695), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 123/163 (75%), Positives = 151/163 (92%), Gaps = 2/163 (1%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
           MKE+ GNPLHLKS+NH+S +C+++ +S+DFY+NVLGFVPIRRPGSF+FDGAWL+G+GIGI
Sbjct: 1   MKETTGNPLHLKSLNHISHLCKSVEQSVDFYENVLGFVPIRRPGSFDFDGAWLYGYGIGI 60

Query: 61  HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
           HLLQSE+PD++PKK+ INPKDNH+SFQCES+G VEK LKEMGIK+VRA+VEEGGI V+QL
Sbjct: 61  HLLQSEDPDNMPKKTEINPKDNHISFQCESMGAVEKKLKEMGIKHVRAMVEEGGIHVDQL 120

Query: 121 FFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQ 163
           FFHDPDGFMIEIC+CD+LPV+PL G+VARSC+RVN   QM+Q 
Sbjct: 121 FFHDPDGFMIEICNCDSLPVIPLAGEVARSCSRVN--LQMIQH 161

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054130|ref|XP_002298106.1| predicted protein [Populus trichocarpa] gi|222845364|gb|EEE82911.1| predicted protein [Populus trichocarpa]

 Score =  270 bits (690), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 127/164 (77%), Positives = 149/164 (90%), Gaps = 1/164 (0%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
           MK+  GN LHLKS+NH+SL+CR++ ESIDFYQ+VLGFVPIRRPGSFNFDGAWLFG GIGI
Sbjct: 1   MKDHMGNSLHLKSLNHISLLCRSVVESIDFYQDVLGFVPIRRPGSFNFDGAWLFGFGIGI 60

Query: 61  HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
           HLLQSENP+ +PKKS INPKDNH+SFQCES+G VEK LKE+GI++VRALVEEGGI VEQL
Sbjct: 61  HLLQSENPEKMPKKSEINPKDNHISFQCESMGAVEKKLKELGIQHVRALVEEGGIQVEQL 120

Query: 121 FFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQQ 164
           FFHDPDGFMIEIC+CDNLPV+PL G+VARSC+ +N +Q M Q++
Sbjct: 121 FFHDPDGFMIEICNCDNLPVIPLAGEVARSCSCLN-LQTMQQER 163

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255636198|gb|ACU18440.1| unknown [Glycine max]

 Score =  266 bits (681), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 123/166 (74%), Positives = 145/166 (87%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
           MKES GNPL L+SVNH+SL+CR++ +S+DFYQNVLGF PIRRPGS +FDGAWLFG+GIGI
Sbjct: 1   MKESVGNPLRLQSVNHISLICRSVEQSMDFYQNVLGFYPIRRPGSLDFDGAWLFGYGIGI 60

Query: 61  HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
           HLL++ENP+ LPKK  INPKDNH+SFQCES+  VEK LKEM I YVRA VEEGGI V+QL
Sbjct: 61  HLLEAENPEKLPKKKEINPKDNHISFQCESMVAVEKKLKEMEIDYVRATVEEGGIQVDQL 120

Query: 121 FFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQQLR 166
           FFHDPDGFMIEIC+CD+LPV+PLVG+VARSC+ VN  +   QQQ+R
Sbjct: 121 FFHDPDGFMIEICNCDSLPVIPLVGEVARSCSLVNLEKMQNQQQIR 166

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18394235|ref|NP_563973.1| lactoylglutathione lyase / glyoxalase I-like protein [Arabidopsis thaliana] gi|79317995|ref|NP_001031049.1| lactoylglutathione lyase / glyoxalase I-like protein [Arabidopsis thaliana] gi|5103836|gb|AAD39666.1|AC007591_31 Is a member of the PF|00903 gyloxalase family. ESTs gb|T44721, gb|T21844 and gb|AA395404 come from this gene [Arabidopsis thaliana] gi|18252885|gb|AAL62369.1| unknown protein [Arabidopsis thaliana] gi|21387069|gb|AAM47938.1| unknown protein [Arabidopsis thaliana] gi|21593872|gb|AAM65839.1| unknown [Arabidopsis thaliana] gi|222424134|dbj|BAH20026.1| AT1G15380 [Arabidopsis thaliana] gi|332191191|gb|AEE29312.1| lactoylglutathione lyase / glyoxalase I-like protein [Arabidopsis thaliana] gi|332191192|gb|AEE29313.1| lactoylglutathione lyase / glyoxalase I-like protein [Arabidopsis thaliana]

 Score =  263 bits (672), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 123/164 (75%), Positives = 145/164 (88%), Gaps = 1/164 (0%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
           MKE AGNPLHL S+NHVS++CR++ ES++FYQ VLGF+PIRRP S NF+GAWLFGHGIGI
Sbjct: 1   MKEDAGNPLHLTSLNHVSVLCRSVDESMNFYQKVLGFIPIRRPESLNFEGAWLFGHGIGI 60

Query: 61  HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
           HLL +  P+ LPKK+ INPKDNH+SFQCES+G VEK L+EMGI YVRALVEEGGI V+QL
Sbjct: 61  HLLCAPEPEKLPKKTAINPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQL 120

Query: 121 FFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQQ 164
           FFHDPDGFMIEIC+CD+LPVVPLVG++ARSC+RV  + QMVQ Q
Sbjct: 121 FFHDPDGFMIEICNCDSLPVVPLVGEMARSCSRVK-LHQMVQPQ 163

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297844440|ref|XP_002890101.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata] gi|297335943|gb|EFH66360.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  262 bits (670), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 123/164 (75%), Positives = 146/164 (89%), Gaps = 1/164 (0%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
           MKE+AGNPLHL S+NHVS++CR++ ES++FYQ VLGF+PIRRP S NF+GAWLFGHGIGI
Sbjct: 1   MKENAGNPLHLTSLNHVSVLCRSVDESMNFYQKVLGFIPIRRPESLNFEGAWLFGHGIGI 60

Query: 61  HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
           HLL +  P+ LPKK+ INPKDNH+SFQCES+G VEK L+EMGI+YVRALVEEGGI V+QL
Sbjct: 61  HLLCAPEPEKLPKKTAINPKDNHISFQCESMGVVEKQLEEMGIEYVRALVEEGGIQVDQL 120

Query: 121 FFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQQ 164
           FFHDPDGFMIEIC+CD+LPVVPLVG +ARSC+RV  + QMVQ Q
Sbjct: 121 FFHDPDGFMIEICNCDSLPVVPLVGGMARSCSRVK-LHQMVQPQ 163

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224070835|ref|XP_002303256.1| predicted protein [Populus trichocarpa] gi|222840688|gb|EEE78235.1| predicted protein [Populus trichocarpa]

 Score =  262 bits (669), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 120/158 (75%), Positives = 145/158 (91%), Gaps = 1/158 (0%)

Query: 6   GNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQS 65
           GNPLHLKS+NH+SL+C+++ ESIDFY++VLGFVPIRRPGSFNFDGAWLFG+GIGIHLLQS
Sbjct: 1   GNPLHLKSLNHISLLCKSLEESIDFYEDVLGFVPIRRPGSFNFDGAWLFGYGIGIHLLQS 60

Query: 66  ENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDP 125
           ENP+ + KK  INPKDNH+SFQCES+  VEK LK+MGI++VRALVEEGGI VEQLFFHDP
Sbjct: 61  ENPEKMQKKGKINPKDNHISFQCESMAAVEKKLKDMGIQHVRALVEEGGIQVEQLFFHDP 120

Query: 126 DGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQ 163
           DGFMIEICDCDNLPV+PL G++A+SC+ +N +++M QQ
Sbjct: 121 DGFMIEICDCDNLPVIPLAGEIAQSCSYLN-LERMQQQ 157

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506784|gb|AFK41458.1| unknown [Lotus japonicus] gi|388522799|gb|AFK49461.1| unknown [Lotus japonicus]

 Score =  261 bits (668), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 117/155 (75%), Positives = 141/155 (90%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
           MK+S GNPLHLKSVNH+SL+CR++ ES+ FYQ+VLGF PIRRPGSF+FDGAWLFG+GIGI
Sbjct: 1   MKDSVGNPLHLKSVNHISLICRSVEESMAFYQDVLGFFPIRRPGSFDFDGAWLFGYGIGI 60

Query: 61  HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
           HLL++ENP+ LP+K  INPKDNH+SFQCES+G VEK LK+M I YVRA VEEGGI V+QL
Sbjct: 61  HLLEAENPEKLPRKKEINPKDNHISFQCESMGAVEKKLKDMEIAYVRATVEEGGIQVDQL 120

Query: 121 FFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVN 155
           FFHDPDGFMIEIC+CD+LPV+PL G++ARSC+R+N
Sbjct: 121 FFHDPDGFMIEICNCDSLPVIPLAGELARSCSRLN 155

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436156|ref|XP_004135860.1| PREDICTED: uncharacterized protein LOC101209593 [Cucumis sativus] gi|449491017|ref|XP_004158775.1| PREDICTED: uncharacterized LOC101209593 [Cucumis sativus]

 Score =  259 bits (663), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 119/152 (78%), Positives = 139/152 (91%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
           MKES GNPLHLKS+NH+SL+C+++ ESI FYQN+LGF PIRRPGSF FDGAWLFG+GIGI
Sbjct: 1   MKESEGNPLHLKSINHISLLCKSVEESIYFYQNILGFFPIRRPGSFKFDGAWLFGYGIGI 60

Query: 61  HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
           HLLQSE P++LPKK  INPKDNH+SFQCES+G VEK LKEM I+YVRA+VEEGGI V+QL
Sbjct: 61  HLLQSEKPENLPKKGKINPKDNHISFQCESMGAVEKKLKEMEIEYVRAVVEEGGIQVDQL 120

Query: 121 FFHDPDGFMIEICDCDNLPVVPLVGDVARSCA 152
           FFHDPDGFMIEIC+CDNLPV+PL G+V+RSC+
Sbjct: 121 FFHDPDGFMIEICNCDNLPVIPLGGEVSRSCS 152

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5902371|gb|AAD55473.1|AC009322_13 Hypothetical protein [Arabidopsis thaliana]

 Score =  259 bits (662), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 118/162 (72%), Positives = 144/162 (88%), Gaps = 1/162 (0%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
           MK+  GNPLH+KS+NH+SL+CR++ ESI FYQNVLGF+PIRRP SF+FDGAWLFGHGIGI
Sbjct: 42  MKDETGNPLHIKSLNHISLLCRSVEESISFYQNVLGFLPIRRPDSFDFDGAWLFGHGIGI 101

Query: 61  HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
           HLLQS  P+ L KK+ INPKDNH+SFQCES+  VEK LKEM I+YVRA+VEEGGI V+QL
Sbjct: 102 HLLQSPEPEKLLKKTEINPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVDQL 161

Query: 121 FFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQ 162
           FFHDPD FMIEIC+CD+LPV+PL G++ARSC+R+N ++Q+VQ
Sbjct: 162 FFHDPDAFMIEICNCDSLPVIPLAGEMARSCSRLN-IRQLVQ 202

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.970	0.936	0.75	3.6e-66
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.958	0.964	0.728	1.1e-64
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.785	0.717	0.529	2.1e-38
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.672	0.573	0.333	9.1e-13
TAIR|locus:2045482	135	AT2G32090 "AT2G32090" [Arabido	0.714	0.888	0.308	9.7e-09
TIGR_CMR|CPS_2825	128	CPS_2825 "glyoxylase family pr	0.690	0.906	0.310	2.6e-08
UNIPROTKB|Q8EFL3	153	SO_1958 "Glyoxylase-like domai	0.720	0.790	0.269	1.4e-07
TIGR_CMR|SO_1958	153	SO_1958 "conserved hypothetica	0.720	0.790	0.269	1.4e-07
TIGR_CMR|BA_0607	128	BA_0607 "glyoxylase family pro	0.708	0.929	0.269	4.8e-07
UNIPROTKB|Q9K3D3	132	VC_A0328 "Biphenyl-2,3-diol 1,	0.726	0.924	0.261	1.5e-05

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 123/164 (75%), Positives = 145/164 (88%)

Query:     1 MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
             MKE AGNPLHL S+NHVS++CR++ ES++FYQ VLGF+PIRRP S NF+GAWLFGHGIGI
Sbjct:     1 MKEDAGNPLHLTSLNHVSVLCRSVDESMNFYQKVLGFIPIRRPESLNFEGAWLFGHGIGI 60

Query:    61 HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
             HLL +  P+ LPKK+ INPKDNH+SFQCES+G VEK L+EMGI YVRALVEEGGI V+QL
Sbjct:    61 HLLCAPEPEKLPKKTAINPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQL 120

Query:   121 FFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQQQ 164
             FFHDPDGFMIEIC+CD+LPVVPLVG++ARSC+RV  + QMVQ Q
Sbjct:   121 FFHDPDGFMIEICNCDSLPVVPLVGEMARSCSRVK-LHQMVQPQ 163

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
 Identities = 118/162 (72%), Positives = 144/162 (88%)

Query:     1 MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
             MK+  GNPLH+KS+NH+SL+CR++ ESI FYQNVLGF+PIRRP SF+FDGAWLFGHGIGI
Sbjct:     1 MKDETGNPLHIKSLNHISLLCRSVEESISFYQNVLGFLPIRRPDSFDFDGAWLFGHGIGI 60

Query:    61 HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
             HLLQS  P+ L KK+ INPKDNH+SFQCES+  VEK LKEM I+YVRA+VEEGGI V+QL
Sbjct:    61 HLLQSPEPEKLLKKTEINPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVDQL 120

Query:   121 FFHDPDGFMIEICDCDNLPVVPLVGDVARSCARVNSVQQMVQ 162
             FFHDPD FMIEIC+CD+LPV+PL G++ARSC+R+N ++Q+VQ
Sbjct:   121 FFHDPDAFMIEICNCDSLPVIPLAGEMARSCSRLN-IRQLVQ 161

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 71/134 (52%), Positives = 105/134 (78%)

Query:    11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
             L ++NHVS +C+++ +S++FY  VLGFV I RP SF+FDGAWLF +G+GIHL+Q+++ D 
Sbjct:    18 LMALNHVSRLCKDVKKSLEFYTKVLGFVEIERPASFDFDGAWLFNYGVGIHLVQAKDQDK 77

Query:    71 LPKKSV-INPKDNHLSFQCESVGNVEKFLKEMGIKYVRALV-EEGGILVEQLFFHDPDGF 128
             LP  +  ++P DNH+SFQCE +  +EK LKE+ +KY++  V +E    ++QLFF+DPDGF
Sbjct:    78 LPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPDGF 137

Query:   129 MIEICDCDNLPVVP 142
             M+EIC+C+NL +VP
Sbjct:   138 MVEICNCENLELVP 151

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 40/120 (33%), Positives = 61/120 (50%)

Query:    14 VNHVSLVCRNISESIDFYQNVLGF-VPIRRP-GSFNFDGAWLFGHGIGIHLLQSENPDSL 71
             V+HV L+C N+  S++FYQN+LG  +   RP     + GAWL+     IHL++  NPD L
Sbjct:    79 VHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPL 138

Query:    72 PKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIE 131
               +     +D H       V N+++ L + GI Y  +  + G      +F  DPD   +E
Sbjct:   139 TGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMS--KSGR---PAIFTRDPDANALE 193

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2045482 AT2G32090 "AT2G32090" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 41/133 (30%), Positives = 65/133 (48%)

Query:    11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG-IGIHLLQSENPD 69
             + S+ H++    +I+    FY+ V GF  I  P   +    WL   G   +H++Q     
Sbjct:     1 MASLGHIARESSDITRLAQFYKEVFGFEEIESPDFGDLQVVWLNLPGAFAMHIIQRNPST 60

Query:    70 SLPK---KSVINPKD-NHLSFQ---CESVGNVEKFL---KEMGIKYVRALVEEGGILVEQ 119
             +LP+    +    KD +HL      C SV N + FL   KE GI+  +  + +G   V+Q
Sbjct:    61 NLPEGPYSATSAVKDPSHLPMGHHICFSVPNFDSFLHSLKEKGIETFQKSLPDGK--VKQ 118

Query:   120 LFFHDPDGFMIEI 132
             +FF DPDG  +E+
Sbjct:   119 VFFFDPDGNGLEV 131

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

TIGR_CMR|CPS_2825 CPS_2825 "glyoxylase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 40/129 (31%), Positives = 61/129 (47%)

Query:    11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRP-----GSFNFDGAWLFGHGIGIHLLQS 65
             L  ++HV+++C +  +S DFY  +LGF  I         SF  D A     G  I L   
Sbjct:     2 LNGIHHVAIICSDYEKSKDFYTRILGFKIIAENYRADRDSFKLDLA--LADGTQIELFSF 59

Query:    66 ENPDSLPKKSVINPKD-NHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL-FFH 123
               PD+  + S    +   HL+F  E+V  V ++L  +G+      V+E     +Q  FF 
Sbjct:    60 --PDAPKRPSFPEAQGLRHLAFNVENVEAVSQYLTNLGVDVESIRVDE--YTGKQFTFFS 115

Query:   124 DPDGFMIEI 132
             DPDG  +E+
Sbjct:   116 DPDGLPLEL 124

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|Q8EFL3 SO_1958 "Glyoxylase-like domain protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 35/130 (26%), Positives = 69/130 (53%)

Query:     9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI-HLLQ--S 65
             +++  ++H ++    ++E++ FYQ +LG     RP  F F G WL+     I HL++  S
Sbjct:     1 MNIVGLDHFTIRTPILAETVQFYQVILGLTQGWRP-RFGFPGHWLYAEEKPILHLVEVGS 59

Query:    66 ENPDS-LPKKSVI--NPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFF 122
                D+ L + + +  + + +HLSF+  ++  +++ L     ++   +V E G    QLF 
Sbjct:    60 RALDAYLGESNALFGSGRVDHLSFRGTNLAQMQQHLCRQQCQFRERIVPEIG--EHQLFI 117

Query:   123 HDPDGFMIEI 132
              DP+G  +E+
Sbjct:   118 EDPNGITVEM 127

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_1958 SO_1958 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 35/130 (26%), Positives = 69/130 (53%)

Query:     9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI-HLLQ--S 65
             +++  ++H ++    ++E++ FYQ +LG     RP  F F G WL+     I HL++  S
Sbjct:     1 MNIVGLDHFTIRTPILAETVQFYQVILGLTQGWRP-RFGFPGHWLYAEEKPILHLVEVGS 59

Query:    66 ENPDS-LPKKSVI--NPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFF 122
                D+ L + + +  + + +HLSF+  ++  +++ L     ++   +V E G    QLF 
Sbjct:    60 RALDAYLGESNALFGSGRVDHLSFRGTNLAQMQQHLCRQQCQFRERIVPEIG--EHQLFI 117

Query:   123 HDPDGFMIEI 132
              DP+G  +E+
Sbjct:   118 EDPNGITVEM 127

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TIGR_CMR|BA_0607 BA_0607 "glyoxylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 35/130 (26%), Positives = 59/130 (45%)

Query:     9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPI-----RRPGSFNFDGAWLFGHGIGIHLL 63
             +++  V+HV+++C N   S DFY  +LGF  I     +   S+  D     G    I L 
Sbjct:     1 MNISRVHHVAIICSNYEVSKDFYTRILGFKAINEVYRKERDSYKLD--LCVGKEYQIELF 58

Query:    64 QSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQ-LFF 122
                NP   P          HL+F   ++    + L + G++     ++E  I  ++ +FF
Sbjct:    59 SFPNPPKRPSFPEAAGL-RHLAFAVTNIEEAVQDLSQCGVETEAIRIDE--ITGKKFVFF 115

Query:   123 HDPDGFMIEI 132
              DPDG  +E+
Sbjct:   116 QDPDGLPLEL 125

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|Q9K3D3 VC_A0328 "Biphenyl-2,3-diol 1,2-dioxygenase III-related protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 35/134 (26%), Positives = 60/134 (44%)

Query:     9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWL-FGHG-IGIHLLQSE 66
             + +  ++H+ L   +I  + +FY+ VLG   +    SF      L FGH  I +H L +E
Sbjct:     5 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAV----SFGAGRIALEFGHQKINLHQLGNE 60

Query:    67 NPDSLPKKSVINPKDNHLSFQCESV-GNVEKFLKEMGIKYVRALVEEGGI--LVEQLFFH 123
                  PK   +      L F  ++V  +  K ++  G+  +   V+  G    +   +F 
Sbjct:    61 FE---PKAQNVRVGSADLCFITDTVLSDAMKHVENQGVTIMEGPVKRTGAQGAITSFYFR 117

Query:   124 DPDGFMIEICDCDN 137
             DPDG +IE+    N
Sbjct:   118 DPDGNLIEVSTYSN 131

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0084001901 hypothetical protein (172 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	168
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	1e-34
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	4e-18
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	6e-17
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-14
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	3e-14
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	9e-12
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	1e-10
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	2e-09
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	6e-09
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	2e-08
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	9e-08
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	3e-07
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	9e-07
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	2e-06
cd08363	131	cd08363, FosB, FosB, a fosfomycin resistance prote	3e-06
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	4e-06
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	7e-06
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	9e-06
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	2e-05
cd08357	125	cd08357, Glo_EDI_BRP_like_18, This conserved domai	3e-05
PRK04101	139	PRK04101, PRK04101, fosfomycin resistance protein	1e-04
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	1e-04
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	2e-04
COG2514	265	COG2514, COG2514, Predicted ring-cleavage extradio	3e-04
cd08343	131	cd08343, ED_TypeI_classII_C, C-terminal domain of	0.001
cd07266	121	cd07266, HPCD_N_class_II, N-terminal domain of 3,4	0.002
PRK11478	129	PRK11478, PRK11478, putative lyase; Provisional	0.003
cd09011	120	cd09011, Glo_EDI_BRP_like_23, This conserved domai	0.003
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	0.004

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  116 bits (294), Expect = 1e-34
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 7/120 (5%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF-GHGIGIHLLQSENPDSLP 72
           ++HV+L   ++  S  FY +VLG     RP  F F GAWL+ G G  +HL++ + PD+LP
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLGLEEGPRP-PFLFPGAWLYAGDGPQLHLIEEDPPDALP 59

Query: 73  KKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI 132
                  +D+H++F+ + +      LK  G+ Y  + V   G  V QLF  DPDG  IE+
Sbjct: 60  ---EGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG--VRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 74.8 bits (184), Expect = 4e-18
 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 7/117 (5%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKS 75
           HV L   ++  ++ FY++VLGF  + R G    + A+L   G  + L + + P       
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGG-AEFAFLRLGGTRLELFEGDEPAPPSGGG 59

Query: 76  VINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI 132
                  HL+F+ + V    + LK  G++ +    EE        +F DPDG +IE+
Sbjct: 60  G-----VHLAFEVDDVDAAVERLKAAGVEILGGPREEPWG-GRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 72.1 bits (177), Expect = 6e-17
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 10/124 (8%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFD--GAWLFGHGIGIHLLQSENPDSL 71
           ++HV+L   ++ +S+DFY +VLGF  +            A+    G  + LL +E P   
Sbjct: 2   IDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPA 61

Query: 72  PKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFFHDPDGF 128
                     +H++F   SV +V+     LK  G++ VR     G       F  DPDG 
Sbjct: 62  AAG----FGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYSYFR-DPDGN 116

Query: 129 MIEI 132
           +IE+
Sbjct: 117 LIEL 120

Length = 120

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 66.3 bits (161), Expect = 2e-14
 Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDG---AWLFGHGIGIHLLQS----- 65
           ++HV+L   ++  SIDFY +VLG   ++   +   DG     LF  G G           
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 66  -------ENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVE 118
                     D        +    HL+F+ +     +  L  +    VR  + E G    
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV 122

Query: 119 QLFFHDPDGFMIEIC 133
            ++F DPDG +IE+ 
Sbjct: 123 HVYFRDPDGILIELA 137

Length = 138

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 64.8 bits (158), Expect = 3e-14
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 19  LVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVIN 78
           L   ++  +  FY+ +LGF      G +       F  G+ + L        LP+     
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEEEDGEY-----AEFRLGLVLALGGFIELIGLPEPDAPG 55

Query: 79  PKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC 133
               HL F+ + +  +   LK  G   +    +       + +  DPDG +IE+ 
Sbjct: 56  GGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWG-GREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 58.8 bits (143), Expect = 9e-12
 Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 21/134 (15%)

Query: 13  SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLP 72
            ++HV L  R++  S  FY  +LG +       +    +W  G G    +LQ  + +S  
Sbjct: 1   GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGGTYLVLQQADGESAG 60

Query: 73  KKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQ------------- 119
           +    NP  +HL+F+  S   V++            L + G  ++               
Sbjct: 61  RHDRRNPGLHHLAFRAPSREAVDEL--------YARLAKRGAEILYAPREPYAGGPGYYA 112

Query: 120 LFFHDPDGFMIEIC 133
           LFF DPDG  +E+ 
Sbjct: 113 LFFEDPDGIRLELV 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 55.8 bits (135), Expect = 1e-10
 Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 27/138 (19%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIR---RP--GSFNFDGAWLFGHGIGIHLLQS 65
           LK ++HV+++C + + S +FY  VLG   IR   RP   S+  D A L G    I L   
Sbjct: 1   LKGIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLA-LNGEYQ-IELFSF 58

Query: 66  ENPDSLPKKSVINPKD---NHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL-- 120
            NP   P      P+     HL+F  E +      LK  G++     VE   I V++   
Sbjct: 59  PNPPPRPSY----PEACGLRHLAFAVEDIEAAVAELKAHGVE-----VEP--IRVDEFTG 107

Query: 121 ----FFHDPDGFMIEICD 134
               FF+DPDG  +E+ +
Sbjct: 108 KRFTFFYDPDGLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 19/132 (14%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAW---LF------GHGIGIHLLQ 64
           ++HV+LV R+  E++DFY +VLG   +++  + N D      LF        G  +    
Sbjct: 2   LHHVTLVTRDAQETVDFYTDVLGLRLVKK--TVNQDDPGTYHLFFGDGLGSPGTLLTFF- 58

Query: 65  SENPDSLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLF 121
            E PD+ PK      + +H++F   S  ++E +   L+  G+  V  +V+  G     L+
Sbjct: 59  -EWPDAGPKGRRGPGQIHHIAFSVPSEASLEAWRERLRAAGVP-VSGVVDRFGE--RSLY 114

Query: 122 FHDPDGFMIEIC 133
           F DPDG  +E+ 
Sbjct: 115 FEDPDGIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 6/125 (4%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           +K ++HV L   +I  ++DFY  VLG   +R         A  FG    I+L        
Sbjct: 1   IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGR-KALRFGSQK-INLHPVGGE-F 57

Query: 71  LPKKSVINPKDNHLSFQCE-SVGNVEKFLKEMGIKYVRALVEEGGIL--VEQLFFHDPDG 127
            P      P  + L    E  +  +   L+  G+      V   G    +  ++F DPDG
Sbjct: 58  EPAAGSPGPGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDG 117

Query: 128 FMIEI 132
            +IE+
Sbjct: 118 NLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 13/131 (9%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVP---IRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           ++H+ +   ++  ++ FY++VLG  P      P       A+L    + I L++  + DS
Sbjct: 1   IDHIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNVQIELIEPLDDDS 60

Query: 71  LPKKSVINPKD--NHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVE---QLFFHDP 125
              K +    +  +H++F+ + +      LK  G   VR L E   I        F H  
Sbjct: 61  PIAKFLEKRGEGLHHIAFEVDDIDAALARLKAQG---VRLLQEGPRIGAGGKRVAFLHPK 117

Query: 126 D--GFMIEICD 134
           D  G +IE+ +
Sbjct: 118 DTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 47.9 bits (115), Expect = 9e-08
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 23/130 (17%)

Query: 15  NHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDG-----AWL-FGHGIGIHLLQ-SEN 67
            H  L  +++ +S+DFY +VLG   +RR    +F        +L +       +L+ + N
Sbjct: 2   LHTMLRVKDLEKSLDFYTDVLGMKLLRR---KDFPEGKFTLVFLGYPDEDSEGVLELTYN 58

Query: 68  PDSLPKKSVINPKD-NHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFF- 122
             +  ++   N     HL+F   +V +V      L+EMG++  +     G   ++ + F 
Sbjct: 59  WGT--EEPYDNGNGFGHLAF---AVDDVYAACERLEEMGVEVTK---PPGDGGMKGIAFI 110

Query: 123 HDPDGFMIEI 132
            DPDG+ IE+
Sbjct: 111 KDPDGYWIEL 120

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 24/140 (17%)

Query: 13  SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF-------GHGIGIHLLQS 65
            ++HV L  R++   + FY++VLGF    R       G  +F        H I   L+  
Sbjct: 1   RLSHVVLYVRDLEAMVRFYRDVLGFTVTDR----GPLGGLVFLSRDPDEHHQIA--LITG 54

Query: 66  ENPDSLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFF 122
                 P  + +    NH++F+ +S+ ++      L+  GI  V  +          ++F
Sbjct: 55  RPAAPPPGPAGL----NHIAFEVDSLDDLRDLYERLRAAGITPVWPVDHGNAW---SIYF 107

Query: 123 HDPDGFMIEICDCDNLPVVP 142
            DPDG  +E+   D    V 
Sbjct: 108 RDPDGNRLELF-VDTPWYVA 126

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.2 bits (108), Expect = 9e-07
 Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 21/128 (16%)

Query: 13  SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLP 72
            +  V+L   ++  S+ FYQ+VLG   + R  S     A L G G    LL  E     P
Sbjct: 2   RIGAVTLRVADLERSLAFYQDVLGLEVLERTDS----TAVL-GTGGKRPLLVLEEDPDAP 56

Query: 73  KKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILV--------EQLFFHD 124
                     H +    S  ++ + L        R L+E G  L         E L+  D
Sbjct: 57  PAPPGTTGLYHFAILLPSRADLARAL--------RRLIELGIPLEGASDHLVSEALYLSD 108

Query: 125 PDGFMIEI 132
           P+G  IEI
Sbjct: 109 PEGNGIEI 116

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 17/117 (14%)

Query: 19  LVCRNISESIDFYQNVLGFVPI--RRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSV 76
           L   +I +S+ FY++VLGF          +    A +   G  +HL + +  +       
Sbjct: 4   LPVSDIEKSLAFYRDVLGFEVDFEHPEPLY----AQVSRDGAQLHLSEHDGDEW------ 53

Query: 77  INPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFFHDPDGFMI 130
             P     +   E V +V+     LK  G K +    E+      +    DPDG ++
Sbjct: 54  -VPLGRGGNVYIE-VDDVDALYAELKAKGAKLIVYPPEDQPWGQREFAVQDPDGNLL 108

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|176711 cd08363, FosB, FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

 Score = 44.1 bits (104), Expect = 3e-06
 Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 25/128 (19%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPI---RRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           +NH++    N+ +SI FY++V     +    +   F   G W         L  +E PD 
Sbjct: 1   INHMTFSVSNLDKSISFYKHVFMEKLLVLGEKTAYFTIGGTW---------LALNEEPD- 50

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVE--EGGILVEQ----LFFHD 124
           +P+   I     H++F  E     +        +   A V    G     +    ++F D
Sbjct: 51  IPRNE-IRQSYTHIAFTIE-----DSEFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTD 104

Query: 125 PDGFMIEI 132
           PDG  +E+
Sbjct: 105 PDGHKLEV 112

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 131

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 43.5 bits (103), Expect = 4e-06
 Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 27/127 (21%)

Query: 13  SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLP 72
            +NH++L   ++  S+ FY ++LGF    R       GA+L    + + L    N     
Sbjct: 1   GINHITLAVSDLERSVAFYVDLLGFKLHVRWDK----GAYLEAGDLWLCLSVDANVGPA- 55

Query: 73  KKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVE-------EGGILVEQLFFHDP 125
                     H +F              +  K  +A V+       EG    +  +F DP
Sbjct: 56  ------KDYTHYAFSVSEED-----FASLKEKLRQAGVKEWKENTSEG----DSFYFLDP 100

Query: 126 DGFMIEI 132
           DG  +E+
Sbjct: 101 DGHKLEL 107

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.7 bits (101), Expect = 7e-06
 Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 14/119 (11%)

Query: 22  RNISESIDFYQNVLGFVPIRR-PGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPK 80
            ++  +  FY++VLG   + +      F   W+ G G+   LL  +   +      I P 
Sbjct: 9   DDLEAAEAFYEDVLGLELMLKEDRRLAF--FWVGGRGM---LLLFDPGATSTPGGEIPPH 63

Query: 81  DN----HLSFQC--ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC 133
                 H +F    E +   E  L+  G+     +    G     L+F DPDG ++E+ 
Sbjct: 64  GGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRG--GRSLYFRDPDGNLLELA 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 42.3 bits (100), Expect = 9e-06
 Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIR--RPGSFNFDGAWLF---GHGIGIHLLQSENPDS 70
           H+ +V  ++  +  F+ ++LG  P    R    N D A+     G  + + L+Q  + +S
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGES 61

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGG 114
              K    P  +H+++  + +      L+  G++        G 
Sbjct: 62  FLDKG--GPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGA 103

Length = 110

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 22/125 (17%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIR-RPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK 74
           HV+L   ++  SI FY  + G  P + R     F           ++ + +E P + P  
Sbjct: 4   HVALNVDDLEASIAFYSKLFGVEPTKVRDDYAKFLLEDP-----RLNFVLNERPGA-PGG 57

Query: 75  SVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEG----GILVEQLFFHDPDG 127
            +     NHL  Q +S   V +     +  G+       EE       + ++++  DPDG
Sbjct: 58  GL-----NHLGVQVDSAEEVAEAKARAEAAGLPT---FKEEDTTCCYAVQDKVWVTDPDG 109

Query: 128 FMIEI 132
              E+
Sbjct: 110 NAWEV 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

>gnl|CDD|176705 cd08357, Glo_EDI_BRP_like_18, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 22/130 (16%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIRR-PGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK 74
           H+++  R++  +  FY +VLG    R      +FD    FGH +  HL  + N D     
Sbjct: 2   HLAIPVRDLEAARAFYGDVLGCKEGRSSETWVDFD---FFGHQLVAHLSPNFNAD----- 53

Query: 75  SVINPKDNH--------LSFQCESVGNVEKFLKEMGIKYVRALVE--EGGILVEQ--LFF 122
           +  N  D H        L    E    + + L+  G++++       EG    EQ   F 
Sbjct: 54  ASDNAVDGHPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPG-EQETFFL 112

Query: 123 HDPDGFMIEI 132
            DP G  +E 
Sbjct: 113 KDPSGNALEF 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|179740 PRK04101, PRK04101, fosfomycin resistance protein FosB; Provisional

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 21/128 (16%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLG---FVPIRRPGSFNFDGAWLFGHGIGIHLLQSEN 67
           LK +NH+     N+ +SI+FY+ VLG    V  R+   F+ +G W+           +E 
Sbjct: 2   LKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGRKTAYFDLNGLWI---------ALNEE 52

Query: 68  PDSLPKKSVINPKDNHLSF--QCESVGNVEKFLKEMGIKYV--RALVEEGGILVEQLFFH 123
            D +P+   I+    H++F  + E   +  + LKE  +  +  R   E      + ++F 
Sbjct: 53  KD-IPRNE-IHQSYTHIAFSIEEEDFDHWYQRLKENDVNILPGRERDERDK---KSIYFT 107

Query: 124 DPDGFMIE 131
           DPDG   E
Sbjct: 108 DPDGHKFE 115

Length = 139

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 39.1 bits (91), Expect = 1e-04
 Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 13/119 (10%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKS 75
           H++L+ +++++SI FY+++LG   I          A+    G+ I L++    DSL    
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSSK----EAYFELAGLWICLMEE---DSLQG-- 51

Query: 76  VINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVE--QLFFHDPDGFMIEI 132
                  H++FQ +S    +++ + +    V    E   +  E   ++F+DPDG ++E+
Sbjct: 52  -PERTYTHIAFQIQS-EEFDEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLEL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 20/154 (12%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPK 73
             HV L   ++ +S +FY ++LGF           D  +++  GI      S     L K
Sbjct: 5   TGHVELRVTDLDKSREFYVDLLGFRETES------DKEYIYLRGIEEFQHHSL---VLTK 55

Query: 74  KSVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMI 130
                   +++ F+     +++K   F +++G      LV +GG   E L   DP G+ I
Sbjct: 56  APS--AALSYIGFRVSKEEDLDKAADFFQKLGHPV--RLVRDGGQ-PEALRVEDPFGYPI 110

Query: 131 EI-CDCDNLPVVPLVGDVARSCA--RVNSVQQMV 161
           E   + + +  +       R  +  R++     V
Sbjct: 111 EFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFV 144

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|225312 COG2514, COG2514, Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 36/132 (27%), Positives = 50/132 (37%), Gaps = 17/132 (12%)

Query: 8   PLHLKS---VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQ 64
           P  L +   V  V+L  R++     FYQ +LG   +         G    G    + L Q
Sbjct: 2   PFALTTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDGSVTLGV---GGTPLLTLEQ 58

Query: 65  SENPDSLPKKSVINPKDNHLSF---QCESVGNVEKFLKEMGIKYVRALVEEGGILV-EQL 120
             +    P ++       H +F     E +  V   L E GI     LV     LV E L
Sbjct: 59  FPDARRPPPRAAGL---YHTAFLLPTREDLARVLNHLAEEGI----PLVGASDHLVSEAL 111

Query: 121 FFHDPDGFMIEI 132
           +  DP+G  IEI
Sbjct: 112 YLEDPEGNGIEI 123

Length = 265

>gnl|CDD|211355 cd08343, ED_TypeI_classII_C, C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 24/128 (18%)

Query: 16  HVSLVCRNISESIDFYQNVLGF-VPIRRPGSFNFDGAWLFGHGIGIH----LLQSENPDS 70
           HV L   +++ +  FY +VLGF V  R         AWL       H    L        
Sbjct: 2   HVVLRTPDVAATRAFYTDVLGFRVSDRVGDPGVLAAAWL--RCDDEHHDLALFPGPEGPG 59

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGGILVEQLF--FHDP 125
           L          +H++F+ ES+ ++++    L   GI+        G      LF  F DP
Sbjct: 60  L----------HHVAFEVESLDDIKRAGDRLAANGIQIEWGPGRHG--PGNNLFLYFRDP 107

Query: 126 DGFMIEIC 133
           DG  IE+ 
Sbjct: 108 DGNRIELS 115

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are type I, class II enzymes, and are composed of the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. A catalytically essential metal, Fe(II) or Mn(II), presents in all the enzymes in this family. Length = 131

>gnl|CDD|211354 cd07266, HPCD_N_class_II, N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

 Score = 36.1 bits (84), Expect = 0.002
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 16/122 (13%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKS 75
           HV L   ++  S +FY ++LG V          D   ++  G+   +  S     L K  
Sbjct: 7   HVELRVTDLDRSREFYVDLLGLVVTEE------DDGAIYLRGLEEFIHHSL---VLTKAP 57

Query: 76  VINPKDNHLSFQCESVGNVEK---FLKEMGIKYVR-ALVEEGGILVEQLFFHDPDGFMIE 131
              P   HL F+  S  +++K   F +E+G+        EE G     L   DP GF +E
Sbjct: 58  E--PAVGHLGFRVRSEEDLDKAEAFFQELGLPTRWVEAGEEPGQ-GRALRVQDPLGFPLE 114

Query: 132 IC 133
             
Sbjct: 115 FY 116

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a different superfamily. Length = 121

>gnl|CDD|183156 PRK11478, PRK11478, putative lyase; Provisional

 Score = 35.6 bits (82), Expect = 0.003
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 19/134 (14%)

Query: 9   LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAW-----LFGHGIGIHLL 63
           L LK V+H++++  + + S  FY ++LGF           D +W     L G  + I L 
Sbjct: 2   LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARD-SWKGDLALNGQYV-IELF 59

Query: 64  QSENPDSLPKKSVINPKD---NHLSFQCESVGNVEKFLKEMGIK--YVRALVEEGGILVE 118
               P   P +    P+     HL+F  + +      L+   +K   +R           
Sbjct: 60  SFPFPPERPSR----PEACGLRHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFT- 114

Query: 119 QLFFHDPDGFMIEI 132
             FF+DPDG  +E+
Sbjct: 115 --FFNDPDGLPLEL 126

Length = 129

>gnl|CDD|176713 cd09011, Glo_EDI_BRP_like_23, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 35.4 bits (82), Expect = 0.003
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 15/119 (12%)

Query: 19  LVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVIN 78
           LV ++I +S  FY+ VLG   +      +F     F  G  +    S          +  
Sbjct: 8   LVVKDIEKSKKFYEKVLGLKVV-----MDFGENVTFEGGFALQEGYSWLEGISKADIIEK 62

Query: 79  PKDNHLSFQCESVGNVEKFLKEM----GIKYVRALVE-EGGILVEQLFFHDPDGFMIEI 132
             +  L F+ E   + + FL ++     I+YV  + E   G  V +  F+DPD  +IE+
Sbjct: 63  SNNFELYFEEE---DFDAFLDKLKRYDNIEYVHPIKEHPWGQRVVR--FYDPDKHIIEV 116

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 35.2 bits (82), Expect = 0.004
 Identities = 25/122 (20%), Positives = 39/122 (31%), Gaps = 19/122 (15%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVP---IRRPGSFNFDGAWLF-----GHGIGIHLLQSEN 67
            VSL   +  +++ FY   LGF     +   G F     W+           + L    N
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFR----WVTVAPPGSPETSLVLAPPAN 56

Query: 68  PDSLPKKSVINPKDNH--LSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDP 125
           P      +          L    + +    + LK  G+++     E     V    F DP
Sbjct: 57  P---AAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMPYGTVAV--FRDP 111

Query: 126 DG 127
           DG
Sbjct: 112 DG 113

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	168
PRK11478	129	putative lyase; Provisional	99.89
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.88
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.88
PLN03042	185	Lactoylglutathione lyase; Provisional	99.86
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.86
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.86
PLN02367	233	lactoylglutathione lyase	99.86
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.85
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.85
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.85
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.85
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.85
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.84
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.84
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.84
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.83
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.83
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.83
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.83
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.83
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.82
PRK10291	129	glyoxalase I; Provisional	99.82
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.82
PLN02300	286	lactoylglutathione lyase	99.82
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.82
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.82
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.82
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.82
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.82
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.82
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.82
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.82
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.82
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.81
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.81
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.81
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.81
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.8
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.8
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.8
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.8
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.8
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.8
PRK06724	128	hypothetical protein; Provisional	99.8
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.79
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.79
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.79
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.79
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.78
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.78
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.78
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.78
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.76
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.76
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.76
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.76
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.76
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.76
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.76
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.76
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.76
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.76
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.75
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.75
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.75
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.75
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.74
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.74
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.73
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.72
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.72
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.71
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.71
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.71
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.69
PLN02300	286	lactoylglutathione lyase	99.65
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.62
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.6
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.57
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.54
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.52
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.5
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.41
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.28
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.27
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.26
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.25
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.2
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	99.19
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.1
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.03
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.96
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.9
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.79
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.72
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.66
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.59
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.56
PRK10148	147	hypothetical protein; Provisional	98.52
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.4
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.6
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.46
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.3
PF15067	236	FAM124: FAM124 family	97.07
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	96.7
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.11
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	95.34
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	95.26
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	94.45
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	94.38
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	93.86
PLN02367	233	lactoylglutathione lyase	93.55
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	92.76
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	92.51
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	91.86
PLN03042	185	Lactoylglutathione lyase; Provisional	91.82
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	91.75
PRK10291	129	glyoxalase I; Provisional	91.21
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	90.37
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	89.52
PRK11478	129	putative lyase; Provisional	88.79
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	88.42
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	88.0
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	87.78
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	86.64
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	86.56
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	86.17
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	86.1
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	85.86
PRK11700	187	hypothetical protein; Provisional	85.84
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	85.66
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	85.42
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	84.96
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	84.83
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	81.64
cd04895	72	ACT_ACR_1 ACT domain-containing protein which is c	81.02
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	80.93
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	80.78

>PRK11478 putative lyase; Provisional

Probab=99.89  E-value=1.6e-21  Score=130.67  Aligned_cols=125  Identities=23%  Similarity=0.350  Sum_probs=88.3

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC---CcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF---NFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      ++.+.+++||+|.|+|++++++||+++|||++.......   .+...+...++..++++....+...+. .....+..|+
T Consensus         1 ~~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~~g~~hi   79 (129)
T PRK11478          1 MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPS-RPEACGLRHL   79 (129)
T ss_pred             CCCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCC-CCCCCceeEE
Confidence            467889999999999999999999999999986432111   111122223445677776443322111 1223567899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           85 SFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        85 ~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +|.|+|+++++++|+++|+++...+... ..+.+.+||.|||||.|||++
T Consensus        80 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         80 AFSVDDIDAAVAHLESHNVKCEAIRVDP-YTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEEeCCHHHHHHHHHHcCCeeeccccCC-CCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999999999986443222 123466999999999999986

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.88  E-value=3.4e-21  Score=131.31  Aligned_cols=123  Identities=18%  Similarity=0.290  Sum_probs=90.2

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC-------------CcceeEEe--cCCcEEEEeecCCCCCCCCC-
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF-------------NFDGAWLF--GHGIGIHLLQSENPDSLPKK-   74 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-------------~~~~~~~~--~~~~~~~l~~~~~~~~~~~~-   74 (168)
                      +++++||+|.|+|++++++||++ |||+...+....             ....+++.  .++..++|+....+...... 
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCC
Confidence            46899999999999999999998 999876543210             01112332  23457888876554322111 


Q ss_pred             --CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           75 --SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        75 --~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                        .....+..|+||.|+|+++++++|+++|+++..++... +.+.+.+||+||||+.|||++.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~-~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQY-ENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceec-CCCeEEEEEECCCCCEEEeeec
Confidence              12345788999999999999999999999998765433 2356779999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.88  E-value=2.9e-21  Score=131.05  Aligned_cols=129  Identities=17%  Similarity=0.140  Sum_probs=93.8

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCC--CCCCCCceEEEEEeCCH
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK--SVINPKDNHLSFQCESV   91 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hl~~~v~dl   91 (168)
                      ++|+.|.|.|++++++||+++|||+........+....++..++..+.+............  .....+..|++|.|+|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~Dv   80 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSEDKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVDDA   80 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeCCH
Confidence            5899999999999999999999999877543221222334444455665543332111010  12345788999999999


Q ss_pred             HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCCCCCCCcc
Q 030972           92 GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVPLV  144 (168)
Q Consensus        92 ~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~~~~~p~~  144 (168)
                      ++++++|+++|+++...|...+ .+.+.++++||||+.|||++... ..+|+.
T Consensus        81 da~~~~l~~~G~~v~~~p~~~~-~~~~~~~i~dp~G~~ie~~~~~~-~~~~~~  131 (136)
T cd08342          81 AAAYERAVARGAKPVQEPVEEP-GELKIAAIKGYGDSLHTLVDRKG-YKGPFL  131 (136)
T ss_pred             HHHHHHHHHcCCeEccCceecC-CeEEEEEEeccCCcEEEEEecCC-CCCccC
Confidence            9999999999999998776633 45678999999999999999665 555554

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.86  E-value=2.1e-20  Score=132.48  Aligned_cols=125  Identities=22%  Similarity=0.373  Sum_probs=91.1

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEe-------------------cCCcEEEEeecCCCCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLF-------------------GHGIGIHLLQSENPDS   70 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~-------------------~~~~~~~l~~~~~~~~   70 (168)
                      -++.|++|.|.|++++++||+++|||+...+..  ...+..+++.                   ..+..++|+.......
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~  105 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTES  105 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcc
Confidence            478999999999999999999999999876633  2223333332                   1234788887554322


Q ss_pred             CC----C--CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCCC
Q 030972           71 LP----K--KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNL  138 (168)
Q Consensus        71 ~~----~--~~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~~  138 (168)
                      .+    .  ......|..|++|.|+|+++++++|+++|+++...+....  ..+.+||+|||||.|||++..+.
T Consensus       106 ~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~--~~~~~fi~DPdG~~IEl~e~~~~  177 (185)
T PLN03042        106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGK--MKGLAFIKDPDGYWIEIFDLKRI  177 (185)
T ss_pred             cccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCC--ceeEEEEECCCCCEEEEEECCCc
Confidence            11    0  0111248899999999999999999999999986554322  23558889999999999998764

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.86  E-value=1.6e-20  Score=128.49  Aligned_cols=120  Identities=20%  Similarity=0.213  Sum_probs=83.0

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCC-cceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFN-FDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLS   85 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   85 (168)
                      +.+.+|+|++|.|+|++++.+||+++|||++..+..  ... ....|+..+.. .+.+.....        ...+.+|+|
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~h~~~~~~~--------~~~~~~Hia   72 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-PHDIAFVGG--------PDGKLHHFS   72 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-cceEEEecC--------CCCCceEEE
Confidence            346789999999999999999999999999755421  111 12445543322 222211110        124789999


Q ss_pred             EEeCCHHH---HHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           86 FQCESVGN---VEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        86 ~~v~dl~~---~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |.|+|+++   +.++|+++|+++...|........+++||.|||||.|||.+...
T Consensus        73 f~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~~~  127 (143)
T cd07243          73 FFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAGGY  127 (143)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecCce
Confidence            99998777   56899999999876554322123467999999999999987543

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.86  E-value=3.6e-20  Score=129.27  Aligned_cols=126  Identities=21%  Similarity=0.307  Sum_probs=88.8

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccC----CC----------------CCcceeEEecC-CcEEEEeecCCCCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRP----GS----------------FNFDGAWLFGH-GIGIHLLQSENPDS   70 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~----------------~~~~~~~~~~~-~~~~~l~~~~~~~~   70 (168)
                      .+++||+|.|+|++++++||+++|||+...+.    ..                .....+++..+ +..+++++......
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            57999999999999999999999999875321    00                00122344323 45688888765432


Q ss_pred             CCCC-CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeee-ee-eCC-eeEEEEEEECCCCCEEEEEeeCC
Q 030972           71 LPKK-SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRAL-VE-EGG-ILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        71 ~~~~-~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~-~~-~~g-~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .... .....|..|+||.|+|+++++++|+++|+++...+ .. ..+ ...+.+||+|||||.|||++...
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            2111 12246889999999999999999999998764332 11 111 13467999999999999999764

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PLN02367 lactoylglutathione lyase

Probab=99.86  E-value=4.7e-20  Score=133.57  Aligned_cols=125  Identities=23%  Similarity=0.372  Sum_probs=92.0

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEec-------------------CCcEEEEeecCCCCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFG-------------------HGIGIHLLQSENPDS   70 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~-------------------~~~~~~l~~~~~~~~   70 (168)
                      -.+.|++|.|+|++++++||+++|||+...+..  ...+..+|+..                   .+..++|........
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~  153 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTES  153 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCc
Confidence            468999999999999999999999999877543  22334444421                   134678876555432


Q ss_pred             CC--CCC----CCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCCC
Q 030972           71 LP--KKS----VINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNL  138 (168)
Q Consensus        71 ~~--~~~----~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~~  138 (168)
                      .+  ..+    ....|+.||||.|+|+++++++|+++|+++...|..  +...+.+||+|||||.|||++....
T Consensus       154 ~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~--g~~~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPND--GKMKGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             cccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCcc--CCceEEEEEECCCCCEEEEEecccc
Confidence            11  111    112589999999999999999999999999876543  2224568999999999999997653

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=6.1e-20  Score=121.81  Aligned_cols=122  Identities=25%  Similarity=0.388  Sum_probs=89.6

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC-
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE-   89 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-   89 (168)
                      +++++|+.|.|+|++++++||+++||++.....+..  ...++..++..+++....... .+.......+..|++|.++ 
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~hi~~~~~~   77 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GRKALRFGSQKINLHPVGGEF-EPAAGSPGPGSDDLCLITEP   77 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC--CceEEEeCCEEEEEecCCCcc-CcCccCCCCCCceEEEEecc
Confidence            468999999999999999999999999987764321  233444455566666543321 1111123457799999997 


Q ss_pred             CHHHHHHHHHHcCCeEEeeeeeeCC--eeEEEEEEECCCCCEEEEEee
Q 030972           90 SVGNVEKFLKEMGIKYVRALVEEGG--ILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        90 dl~~~~~~l~~~g~~~~~~~~~~~g--~~~~~~~~~DPdG~~iel~~~  135 (168)
                      ++++++++|+++|+++...+....+  ...+.+||.|||||.||++++
T Consensus        78 ~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          78 PIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             cHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            4999999999999998876644322  234679999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=5.4e-20  Score=122.05  Aligned_cols=122  Identities=29%  Similarity=0.414  Sum_probs=87.0

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCC--cceeEEe-cCCcEEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFN--FDGAWLF-GHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~--~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      +++++||+|.|.|++++++||+++|||+........+  ...+.+. .++..++++........+. .....+..|++|.
T Consensus         1 ~~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~-~~~~~g~~h~~~~   79 (125)
T cd08352           1 LFGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPS-YPEACGLRHLAFS   79 (125)
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCC-CCcCCCceEEEEE
Confidence            3579999999999999999999999999875432111  1112222 3455677766544322111 1234577899999


Q ss_pred             eCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           88 CESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        88 v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      |+|+++++++|+++|+++...+.... .+.+.+|+.||+||.|||++
T Consensus        80 v~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          80 VEDIEAAVKHLKAKGVEVEPIRVDEF-TGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             eCCHHHHHHHHHHcCCccccccccCC-CceEEEEEECCCCCEEEecC
Confidence            99999999999999999876543322 23466999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.85  E-value=5.1e-20  Score=126.90  Aligned_cols=127  Identities=22%  Similarity=0.261  Sum_probs=88.2

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC--CcceeEEecCCc----EEEEeecCCCCCCCCCCCCCCC
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF--NFDGAWLFGHGI----GIHLLQSENPDSLPKKSVINPK   80 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~   80 (168)
                      ++...++++|+.|.|.|++++.+||+++|||+...+....  .....++..++.    .+.+.....  ..+  .....+
T Consensus        11 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~--~~~~~g   86 (150)
T TIGR00068        11 PKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG--TEK--YDLGNG   86 (150)
T ss_pred             cccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCC--CCc--ccCCCc
Confidence            4456789999999999999999999999999986543211  112233332221    222221111  111  122347


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           81 DNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        81 ~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ..|++|.|+|++++.++|.++|+++...+....+...+.+||+||+||.|||++...
T Consensus        87 ~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  143 (150)
T TIGR00068        87 FGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKS  143 (150)
T ss_pred             eeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCc
Confidence            789999999999999999999999876654333333467899999999999998653

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=6.4e-20  Score=121.88  Aligned_cols=119  Identities=19%  Similarity=0.268  Sum_probs=84.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccC--CCCCcceeEEec-CCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRP--GSFNFDGAWLFG-HGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      +++||+|.|+|++++++||+++|||+.....  ....+...|+.. ++..+++++........ ......+..|++|.|+
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~hi~f~v~   79 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NEGERTGWAHLAFSVG   79 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-ccCCCCceEEEEEECC
Confidence            4789999999999999999999999975432  112233445544 34567777643321111 1123357899999996


Q ss_pred             ---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEE
Q 030972           90 ---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC  133 (168)
Q Consensus        90 ---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~  133 (168)
                         ++++++++|+++|+++...+... +.+.+.++|+|||||.|||.
T Consensus        80 ~~~~v~~~~~~l~~~g~~~~~~~~~~-~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          80 SKEAVDELTERLRADGYLIIGEPRTT-GDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CHHHHHHHHHHHHHCCCEEEeCceec-CCCeEEEEEECCCCCEEEeC
Confidence               58999999999999998755432 23345578999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.85  E-value=8e-20  Score=124.40  Aligned_cols=119  Identities=25%  Similarity=0.410  Sum_probs=89.4

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      ++.+++|+.|.|+|++++.+||+++|||++..+..    ..+++..++..+.+......   +.. ....+..|++|.++
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~g~~l~l~~~~~~---~~~-~~~~~~~hiaf~v~   72 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR----KTAYFDLNGLWIALNEEKDI---PRN-EIHQSYTHIAFSIE   72 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC----eeEEEecCCeEEEeeccCCC---CCc-cCCCCeeEEEEEec
Confidence            46789999999999999999999999999876533    34566666666655432211   111 12346789999998


Q ss_pred             --CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           90 --SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        90 --dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                        |+++++++|+++|+++...+.... .+.+.+||+|||||.|||.+...
T Consensus        73 ~~dv~~~~~~l~~~G~~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~~~  121 (139)
T PRK04101         73 EEDFDHWYQRLKENDVNILPGRERDE-RDKKSIYFTDPDGHKFEFHTGTL  121 (139)
T ss_pred             HHHHHHHHHHHHHCCceEcCCccccC-CCceEEEEECCCCCEEEEEeCCH
Confidence              999999999999999876554332 24477999999999999998653

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=7.4e-20  Score=119.09  Aligned_cols=113  Identities=35%  Similarity=0.635  Sum_probs=86.0

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCc-EEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHH
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGI-GIHLLQSENPDSLPKKSVINPKDNHLSFQCESVG   92 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~   92 (168)
                      |+|++|.|+|++++++||+++||++...+.... ....|+..++. .+++.........   .....+..|++|.++|++
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~v~d~~   76 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL-FPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVDDLD   76 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC-CCceEEEeCCCcEEEEEecCCCccc---cCCCcccceEEEEeCCHH
Confidence            589999999999999999999999987654321 23456665554 6777765544221   122356789999999999


Q ss_pred             HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEE
Q 030972           93 NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI  132 (168)
Q Consensus        93 ~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel  132 (168)
                      +++++++++|+++...+..  ..+.+.++|.||+||.|||
T Consensus        77 ~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          77 AFRARLKAAGVPYTESDVP--GDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHcCCCcccccCC--CCCccEEEEECCCCCEEeC
Confidence            9999999999998876543  2344679999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.84  E-value=1.6e-19  Score=121.68  Aligned_cols=117  Identities=17%  Similarity=0.390  Sum_probs=84.7

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCc---ceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNF---DGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      +.+++|+.|.|+|++++++||+++||++...+.+...+   ...|+..++..+.+......        ...+..|++|.
T Consensus         2 i~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~~~~~~Hiaf~   73 (131)
T cd08364           2 IEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDSL--------QERTYNHIAFK   73 (131)
T ss_pred             cccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCCC--------CCCCceEEEEE
Confidence            67899999999999999999999999987655432111   12234444555666532211        12357899999


Q ss_pred             eC--CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           88 CE--SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        88 v~--dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |+  +++++.++|+++|+++........+ ..+.+||+|||||.|||....
T Consensus        74 v~~~~ld~~~~~l~~~gv~~~~~~~~~~~-~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          74 ISDSDVDEYTERIKALGVEMKPPRPRVQG-EGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             cCHHHHHHHHHHHHHCCCEEecCCccccC-CceEEEEECCCCCEEEEecCC
Confidence            98  7999999999999988644322222 346899999999999999753

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.84  E-value=2.1e-19  Score=119.41  Aligned_cols=111  Identities=22%  Similarity=0.270  Sum_probs=80.6

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC--C--cEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH--G--IGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      +.+++|+.|.|+|++++++||+++|||+.......   ..+|+...  .  ..+.+.  ..         ...+..|++|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~l~--~~---------~~~~~~hiaf   67 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQ---GRVYLKAWDEFDHHSIVLR--EA---------DTAGLDFMGF   67 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCC---ceEEEEccCCCcccEEEec--cC---------CCCCeeEEEE
Confidence            56899999999999999999999999998765421   23445432  1  122221  11         1236789999


Q ss_pred             EeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           87 QCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        87 ~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      .++   +++++.++|+++|+++...+........+.+||+|||||.|||.+.
T Consensus        68 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  119 (122)
T cd07265          68 KVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYAD  119 (122)
T ss_pred             EeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEe
Confidence            997   8889999999999998765432221123579999999999999875

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.83  E-value=2.3e-19  Score=118.65  Aligned_cols=115  Identities=26%  Similarity=0.364  Sum_probs=84.1

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCC--CCcceeEEecCC----cEEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGS--FNFDGAWLFGHG----IGIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      +.|++|.|+|++++++||+++||++.......  .+...+|+...+    ..+++........   ......+..|++|.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~   77 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE---PYDNGNGFGHLAFA   77 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC---CcCCCCCeEEEEEE
Confidence            57999999999999999999999998764321  123345555433    3555554332211   11223467899999


Q ss_pred             eCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEE
Q 030972           88 CESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC  133 (168)
Q Consensus        88 v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~  133 (168)
                      ++|+++++++|+++|+.+...+....  ..+.+||+||+||+|||+
T Consensus        78 v~did~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          78 VDDVYAACERLEEMGVEVTKPPGDGG--MKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             eCCHHHHHHHHHHCCCEEeeCCccCC--CceEEEEECCCCCEEEeC
Confidence            99999999999999999987765442  346689999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.83  E-value=7.8e-20  Score=122.10  Aligned_cols=121  Identities=17%  Similarity=0.248  Sum_probs=85.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCcEEEEeecCCCCCCCCC--CCCCCCceEEEEEe
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSENPDSLPKK--SVINPKDNHLSFQC   88 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hl~~~v   88 (168)
                      +++|++|.|+|++++++||+++|||+......  .......++..++..++|............  .....+..|++|.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            47899999999999999999999999875421  122334555556667787764332111110  01235678999999


Q ss_pred             CCHHHHHHHHHHcCCeEEee-eeeeCCeeEEEEEE--ECCCCCEEEEEe
Q 030972           89 ESVGNVEKFLKEMGIKYVRA-LVEEGGILVEQLFF--HDPDGFMIEICD  134 (168)
Q Consensus        89 ~dl~~~~~~l~~~g~~~~~~-~~~~~g~~~~~~~~--~DPdG~~iel~~  134 (168)
                      +|+++++++|+++|+++..+ +... ..+.+.+|+  +||||+.||+++
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~-~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIG-AGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccC-CCCCEEEEecccccCcEEEEecC
Confidence            99999999999999998764 3322 123345666  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.83  E-value=2.7e-19  Score=119.53  Aligned_cols=115  Identities=19%  Similarity=0.301  Sum_probs=83.6

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      |.++.+|.|+.|.|+|++++.+||+++|||++..+..    ...|+..++....+... .. .        .+..|++|.
T Consensus         1 ~~~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~----~~~~l~~~~~~~~i~l~-~~-~--------~~~~~iaf~   66 (124)
T cd08361           1 MIELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA----KATYFRSDARDHTLVYI-EG-D--------PAEQASGFE   66 (124)
T ss_pred             CceEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC----CeEEEEcCCccEEEEEE-eC-C--------CceEEEEEE
Confidence            4568899999999999999999999999999866533    35666654332222211 11 0        245899999


Q ss_pred             eCC---HHHHHHHHHHcCCeEEeeeeeeC--CeeEEEEEEECCCCCEEEEEeeC
Q 030972           88 CES---VGNVEKFLKEMGIKYVRALVEEG--GILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        88 v~d---l~~~~~~l~~~g~~~~~~~~~~~--g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |+|   +++++++|+++|+++...+....  ....+.+||.|||||.|||.+..
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            975   99999999999999876543211  11235589999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.83  E-value=3.3e-19  Score=118.31  Aligned_cols=113  Identities=16%  Similarity=0.144  Sum_probs=82.0

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC--
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE--   89 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~--   89 (168)
                      ++|.||+|.|+|++++++||+++|||+...+..   ....|+..++....+.....+         ..+..|++|.++  
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~f~v~~~   68 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE---DGALYLRMDDRAWRIAVHPGE---------ADDLAYAGWEVADE   68 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC---CCeEEEEccCCceEEEEEeCC---------CCceeEEEEEECCH
Confidence            468999999999999999999999999866532   134566554433333322211         236789999997  


Q ss_pred             -CHHHHHHHHHHcCCeEEeeeeee--CCeeEEEEEEECCCCCEEEEEeeC
Q 030972           90 -SVGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        90 -dl~~~~~~l~~~g~~~~~~~~~~--~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                       |+++++++|+++|+++...+...  .....+.+||+|||||.|||++..
T Consensus        69 ~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          69 AALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence             58889999999999997654211  111236799999999999999753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=6.6e-19  Score=117.81  Aligned_cols=118  Identities=30%  Similarity=0.488  Sum_probs=88.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHcc---CCeeeccCCCCCcceeEEec-CCcEEEEeecCCCCCCCCCCCCCCCceEEEEEe
Q 030972           13 SVNHVSLVCRNISESIDFYQNVL---GFVPIRRPGSFNFDGAWLFG-HGIGIHLLQSENPDSLPKKSVINPKDNHLSFQC   88 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~L---G~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v   88 (168)
                      +|+||+|.|+|++++.+||+++|   ||+.......   ...|... ++..+.++........ .......+..|++|.|
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~---~~~~~~~~~~~~i~l~~~~~~~~~-~~~~~~~g~~hia~~v   76 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED---GRSWRAGDGGTYLVLQQADGESAG-RHDRRNPGLHHLAFRA   76 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc---CceEEecCCceEEEEEecccCCCc-ccccCCcCeeEEEEEc
Confidence            47999999999999999999999   9998776421   2345543 5567777765543221 1112345678999999


Q ss_pred             C---CHHHHHHHHHHcCCeEEeeeeee--CCeeEEEEEEECCCCCEEEEEe
Q 030972           89 E---SVGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        89 ~---dl~~~~~~l~~~g~~~~~~~~~~--~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +   |+++++++|+++|+.+...+...  ...+.+.+||+|||||.|||+.
T Consensus        77 ~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          77 PSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            7   58899999999999998866532  2234577999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.82  E-value=3.3e-19  Score=120.19  Aligned_cols=114  Identities=23%  Similarity=0.362  Sum_probs=85.1

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC--CH
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE--SV   91 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~--dl   91 (168)
                      |+||.|.|+|++++++||+++|||++.....    ...++..++..+.+......   +.. ....+..|++|.++  |+
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~---~~~-~~~~~~~hiaf~v~~~dl   72 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE----KTAYFTIGGTWLALNEEPDI---PRN-EIRQSYTHIAFTIEDSEF   72 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC----ccceEeeCceEEEEEccCCC---CcC-CcCccceEEEEEecHHHH
Confidence            5899999999999999999999999876432    23455556666666543321   111 22356789999997  59


Q ss_pred             HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           92 GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        92 ~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ++++++|+++|+++..++.... ...+.+||.|||||.|||.+..
T Consensus        73 d~~~~~l~~~G~~~~~~~~~~~-~~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          73 DAFYTRLKEAGVNILPGRKRDV-RDRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHcCCcccCCCcccc-CcceEEEEECCCCCEEEEecCc
Confidence            9999999999999875543322 2447799999999999999864

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>PRK10291 glyoxalase I; Provisional

Probab=99.82  E-value=3.7e-19  Score=119.50  Aligned_cols=116  Identities=22%  Similarity=0.333  Sum_probs=79.5

Q ss_pred             EEEeCCHHHHHHHHHHccCCeeeccCCC--CCcceeEEecCC----cEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCH
Q 030972           18 SLVCRNISESIDFYQNVLGFVPIRRPGS--FNFDGAWLFGHG----IGIHLLQSENPDSLPKKSVINPKDNHLSFQCESV   91 (168)
Q Consensus        18 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl   91 (168)
                      +|.|.|++++++||+++|||+.......  ..+..+|+..++    ..+++.....   . .....+.+..|++|.|+|+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~-~~~~~g~~~~hlaf~V~d~   76 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG---V-DKYELGTAYGHIALSVDNA   76 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCC---C-CCCcCCCCeeEEEEEeCCH
Confidence            4789999999999999999998764321  223344443332    1233322111   1 1112235788999999999


Q ss_pred             HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           92 GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        92 ~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++++++|+++|+++...+....+...+.+||+|||||.|||++...
T Consensus        77 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         77 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             HHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            9999999999999876543332223356889999999999999653

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=6.4e-19  Score=116.81  Aligned_cols=116  Identities=22%  Similarity=0.275  Sum_probs=78.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHH
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVG   92 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~   92 (168)
                      ++.|+.|.|+|++++++||+++|||+.....+    ....+ .++..+.+.................+..|++|.|+|++
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~dvd   76 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG----ENVTF-EGGFALQEGYSWLEGISKADIIEKSNNFELYFEEEDFD   76 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC----ceEEE-eccceeccchhhhccCCcccccccCCceEEEEEehhhH
Confidence            68899999999999999999999999865432    11122 22222222111000000011122345689999999999


Q ss_pred             HHHHHHHHcCC-eEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           93 NVEKFLKEMGI-KYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        93 ~~~~~l~~~g~-~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +++++|+++|+ ++...+...+ ++.+.++|+|||||.|||.+
T Consensus        77 ~~~~~l~~~g~~~~~~~~~~~~-~g~r~~~~~DPdGn~iei~~  118 (120)
T cd09011          77 AFLDKLKRYDNIEYVHPIKEHP-WGQRVVRFYDPDKHIIEVGE  118 (120)
T ss_pred             HHHHHHHhcCCcEEecCcccCC-CccEEEEEECCCCCEEEEec
Confidence            99999999985 6766655433 44578999999999999987

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=99.82  E-value=6.1e-19  Score=133.53  Aligned_cols=126  Identities=21%  Similarity=0.261  Sum_probs=90.6

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCC--c--EEEEeecCCCCCCCCCCCCCCCc
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHG--I--GIHLLQSENPDSLPKKSVINPKD   81 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~   81 (168)
                      .|.+.+++|++|.|+|++++++||+++|||+...+..  ...+..+|+..++  .  .+++......    .......+.
T Consensus        19 ~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~----~~~~~~~g~   94 (286)
T PLN02300         19 KKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGV----DKYDIGTGF   94 (286)
T ss_pred             ccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCC----CccccCCCc
Confidence            3678999999999999999999999999999876432  1222345554332  1  2333322111    111224578


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           82 NHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        82 ~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .|++|.|+|+++++++|+++|+++...+....+...+.+||+|||||.|||++...
T Consensus        95 ~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  150 (286)
T PLN02300         95 GHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGP  150 (286)
T ss_pred             cEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Confidence            89999999999999999999999887665443323456899999999999999753

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.82  E-value=8.4e-19  Score=118.61  Aligned_cols=113  Identities=20%  Similarity=0.228  Sum_probs=82.5

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC----cEEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG----IGIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      .+++|++|.|+|++++.+||+++||++...+..   ....|+..++    ..+.+.....         ...+..|++|.
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~---~~~~~~~~~~~~~~~~i~l~~~~~---------~~~g~~hiaf~   69 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK---GRGAFLRAAGGGDHHNLFLIKTPA---------PMAGFHHAAFE   69 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec---CcEEEEECCCCCCCcEEEEecCCC---------CCCcceEEEEE
Confidence            579999999999999999999999999876543   1345665432    2343432211         13578999999


Q ss_pred             eCCHHHHH---HHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           88 CESVGNVE---KFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        88 v~dl~~~~---~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |+|++++.   ++|+++|+++...+........+.+||+||+||.|||....
T Consensus        70 v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          70 VGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             eCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccc
Confidence            99888776   59999999986544332222346699999999999999754

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.82  E-value=6.4e-19  Score=122.31  Aligned_cols=116  Identities=20%  Similarity=0.372  Sum_probs=85.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC---CcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH---GIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      +++||+|.|+|++++.+||+++|||+...+...   ...|+..+   +..+.+++.....   .......+..|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEGD---RVRLEEGGGGPGAVVDVLEEPDQP---RGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeCC---EEEEEecCCCCCCEEEEEeCCCCC---CCcccCCceEEEEEECC
Confidence            479999999999999999999999998765431   23344333   4677777643211   11122356789999999


Q ss_pred             C---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           90 S---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        90 d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |   +++++++|+++|+.+.. +... + ..+++||+|||||.|||++...
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~-~~~~-~-~~~s~yf~DPdG~~iEl~~~~~  122 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSG-IVDR-F-YFKSLYFREPGGILFEIATDGP  122 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCccc-cccc-c-cEEEEEEECCCCcEEEEEECCC
Confidence            7   89999999999998643 2222 2 3467999999999999999763

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.82  E-value=7.2e-19  Score=123.16  Aligned_cols=121  Identities=20%  Similarity=0.284  Sum_probs=84.6

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC--CCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS--FNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      |.+++|+|++|.|+|++++++||+++|||+.......  ......|+...+....+.......      ...++..|++|
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~------~~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPA------GARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCC------CCCCCceEEEE
Confidence            6789999999999999999999999999998654221  112345665443322222211110      11246799999


Q ss_pred             EeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           87 QCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        87 ~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      .|+|   +++++++|+++|+++...+........+.+||.||+||.|||++.
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            9985   557889999999998655543321234569999999999999997

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.82  E-value=1.7e-18  Score=113.53  Aligned_cols=113  Identities=17%  Similarity=0.141  Sum_probs=83.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC-cEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHH
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG-IGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVG   92 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~   92 (168)
                      +.|++|.|+|++++++||+++||++...... .....+++..++ ....++......      .......|++|.++|++
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~f~v~di~   73 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDYAVFSTGGGAVGGLMKAPEPA------AGSPPGWLVYFAVDDVD   73 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCceEEEEeCCccEEEEecCCCCC------CCCCCeEEEEEEeCCHH
Confidence            4799999999999999999999999876543 111233444443 344454443321      12346689999999999


Q ss_pred             HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           93 NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        93 ~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +++++|+++|+++..++...+ ...+.++|.|||||.|+|++
T Consensus        74 ~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          74 AAAARVEAAGGKVLVPPTDIP-GVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHCCCEEEeCCcccC-CcEEEEEEECCCCCEEEeEC
Confidence            999999999999987765444 23478999999999999974

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=2.3e-18  Score=114.66  Aligned_cols=115  Identities=26%  Similarity=0.342  Sum_probs=84.4

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      ++|+||.|.|+|++++++||+++|||++....+    ..+++..++  ..+.+......   ........+..|++|.|+
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~~~l~~~~~~~~l~l~~~~~~---~~~~~~~~~~~hi~f~v~   73 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD----STAVLGTGGKRPLLVLEEDPDA---PPAPPGATGLYHFAILLP   73 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC----CEEEEecCCCeEEEEEEeCCCC---CcccCCCCcEEEEEEECC
Confidence            479999999999999999999999999987643    345665554  34444443322   111123456789999997


Q ss_pred             ---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           90 ---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        90 ---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                         ++++++++|+++|+++.... .. + ..+.+||.|||||.|||.+..
T Consensus        74 ~~~~v~~~~~~l~~~g~~~~~~~-~~-~-~~~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          74 SRADLAAALRRLIELGIPLVGAS-DH-L-VSEALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             CHHHHHHHHHHHHHcCCceeccc-cc-c-ceeEEEEECCCCCEEEEEEec
Confidence               58899999999999875432 11 2 236799999999999999754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.82  E-value=8.8e-19  Score=116.31  Aligned_cols=110  Identities=22%  Similarity=0.338  Sum_probs=81.4

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC----cEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG----IGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      |.+++|+|+.|.|+|++++.+||+++|||++..+.+    ..+|+..++    ..+.+...           ...+..|+
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~~~~l~~~~~~~~~~~~l~~~-----------~~~~~~h~   66 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG----QSVYLRAWGDYEHHSLKLTES-----------PEAGLGHI   66 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----CeEEEEeccCCCccEEEEeeC-----------CCCceEEE
Confidence            567899999999999999999999999999877643    345554432    12222211           12478999


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           85 SFQCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        85 ~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +|.++   ++++++++++++|+++...+... + ....+||+|||||.|||...
T Consensus        67 af~v~~~~~v~~~~~~l~~~G~~~~~~~~~~-~-~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          67 AWRASSPEALERRVAALEASGLGIGWIEGDP-G-HGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCccccccCCC-C-CcceEEEECCCCCEEEEEEe
Confidence            99997   68889999999999874322211 2 23569999999999999974

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.82  E-value=1.3e-18  Score=115.90  Aligned_cols=110  Identities=23%  Similarity=0.364  Sum_probs=81.5

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEe-cCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC-
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF-GHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE-   89 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-   89 (168)
                      .+++|+.|.|+|++++++||+++||++.....+    ...++. .++..+.+.....          ..+..|++|.++ 
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~l~~~~~~~----------~~~~~h~a~~v~~   68 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPFG----PFAVVKLDNGVSLDFAQPDG----------EIPPQHYAFLVSE   68 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC----CEEEEEcCCCcEEEEecCCC----------CCCcceEEEEeCH
Confidence            578999999999999999999999999876432    122232 2334455443211          124589999886 


Q ss_pred             -CHHHHHHHHHHcCCeEEeeeeee------CCeeEEEEEEECCCCCEEEEEee
Q 030972           90 -SVGNVEKFLKEMGIKYVRALVEE------GGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        90 -dl~~~~~~l~~~g~~~~~~~~~~------~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                       |+++++++|+++|+++...+...      ...+.+.+||.|||||.|||++.
T Consensus        69 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          69 EEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence             69999999999999987655432      11345789999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=1.2e-18  Score=114.40  Aligned_cols=115  Identities=19%  Similarity=0.238  Sum_probs=81.3

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCCC-CCcceeEEecC---CcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCH
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPGS-FNFDGAWLFGH---GIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESV   91 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl   91 (168)
                      ||.|.|.|++++++||+++|||++..+... .+...+.+...   +..+++........  .......+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAPPANPAA--MSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeCCCCccc--cccccCCCceEEEEEehHH
Confidence            899999999999999999999999876431 12222222222   22344443333211  1112345678999999999


Q ss_pred             HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           92 GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        92 ~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      ++++++|+++|+++...+....  ..+.++|+||+||.|||++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~--~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMP--YGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCC--CceEEEEECCCCCEEEEeC
Confidence            9999999999999987763322  3477999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.82  E-value=6.3e-19  Score=120.70  Aligned_cols=112  Identities=26%  Similarity=0.389  Sum_probs=81.7

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      .+++|+.|.|+|++++++||+++|||+.......   ...|+..+..  .+.+...           ...+..|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~---~~~~l~~~~~~~~~~l~~~-----------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLGD---QMAFLRCNSDHHSIAIARG-----------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeCC---eEEEEECCCCcceEEEccC-----------CCCceEEEEEECC
Confidence            4799999999999999999999999998654321   2456655432  3333221           1246789999999


Q ss_pred             CHHHHH---HHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           90 SVGNVE---KFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        90 dl~~~~---~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |++++.   ++|+++|+++...+........+.+||.||+||.|||++...
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            877775   899999999876543322122345899999999999999764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.81  E-value=1.2e-19  Score=120.66  Aligned_cols=120  Identities=23%  Similarity=0.335  Sum_probs=86.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCC----CCCcceeEEecCCcEEEEeecCCCCCCCCCC-CCCCCceEEEEE
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPG----SFNFDGAWLFGHGIGIHLLQSENPDSLPKKS-VINPKDNHLSFQ   87 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~hl~~~   87 (168)
                      +|+||+|.|+|++++++||+++|||+......    .......++..+...+.+............. ....+..|+++.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            68999999999999999999999999987644    1122344555566666666655543222211 000145677777


Q ss_pred             eC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEE
Q 030972           88 CE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI  132 (168)
Q Consensus        88 v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel  132 (168)
                      +.   |+++++++|++.|+++...+..........+||+||+||.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            75   7888999999999999988765544445557899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.81  E-value=2.6e-18  Score=112.85  Aligned_cols=110  Identities=19%  Similarity=0.269  Sum_probs=81.4

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCC
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCES   90 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d   90 (168)
                      +++++|+.|.|+|++++.+||++ |||+...+..    ...|+..++....++.....        ...+..|++|.|+|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~----~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~af~v~~   67 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD----DELYYRGYGTDPFVYVARKG--------EKARFVGAAFEAAS   67 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC----CeEEEecCCCccEEEEcccC--------CcCcccEEEEEECC
Confidence            46899999999999999999999 9999866543    34666554332223222111        12467899999999


Q ss_pred             HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           91 VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        91 l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      .+++.+.+++.|......+. .+ .+.+.+||.|||||.|||+..
T Consensus        68 ~~~~~~~~~~~g~~~~~~~~-~~-~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          68 RADLEKAAALPGASVIDDLE-AP-GGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             HHHHHHHHHcCCCeeecCCC-CC-CCceEEEEECCCCCEEEEEec
Confidence            99999999999998765432 12 233679999999999999875

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.81  E-value=3.1e-19  Score=123.42  Aligned_cols=121  Identities=19%  Similarity=0.197  Sum_probs=80.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC---CCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS---FNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      +|+||+|.|+|++++++||+++|||++..+...   ......|+..++.. .+...   ...........+..|+||.|+
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~---~~~~l~~~~~~g~~Hiaf~v~   76 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGE-EYVDH---HTLALAQGPESGVHHAAFEVH   76 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCC-Ccccc---hHHHHhcCCCCceeEEEEEcC
Confidence            579999999999999999999999998654211   11234555443210 00000   000000011357899999999


Q ss_pred             CHHHHH---HHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           90 SVGNVE---KFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        90 dl~~~~---~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |++++.   ++|+++|+++...+.........++||.||+||.|||.....
T Consensus        77 die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~  127 (153)
T cd07257          77 DFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGD  127 (153)
T ss_pred             CHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCce
Confidence            999986   999999999876543322112346899999999999997653

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.81  E-value=1.2e-18  Score=120.58  Aligned_cols=117  Identities=21%  Similarity=0.255  Sum_probs=82.9

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC-----CCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS-----FNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNH   83 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-----~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   83 (168)
                      .++|+||+|.|+|++++++||+++|||++......     .....+|+..++.  .+.+....          ...+..|
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~----------~~~g~~H   76 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGP----------GPKRIHH   76 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCC----------CCceeEE
Confidence            35799999999999999999999999997653211     1123445544321  22322211          1247899


Q ss_pred             EEEEeCCHH---HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           84 LSFQCESVG---NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        84 l~~~v~dl~---~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++|.|+|++   ++.++|+++|+++...+...+....+++|++||+||.|||.+...
T Consensus        77 iaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          77 LMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            999998655   689999999999976654333234577999999999999987654

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.80  E-value=1.9e-18  Score=114.28  Aligned_cols=113  Identities=19%  Similarity=0.244  Sum_probs=82.9

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEe--
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQC--   88 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v--   88 (168)
                      +.+|+|+.|.|+|++++++||+++|||+......    ...|+..++...+++.....        ...+..|++|.+  
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~v~~   68 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GIVYLRATGSEHHILRLRRS--------DRNRLDVVSFSVAS   68 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CEEEEECCCCccEEEEeccC--------CCCCCceEEEEeCC
Confidence            4689999999999999999999999999876543    34566544433233322111        123568999999  


Q ss_pred             -CCHHHHHHHHHHcCCeEEeeeeee-CCeeEEEEEEECCCCCEEEEEee
Q 030972           89 -ESVGNVEKFLKEMGIKYVRALVEE-GGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        89 -~dl~~~~~~l~~~g~~~~~~~~~~-~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                       +++++++++|+++|+++...+... .++..+.++|.||+||.|||+..
T Consensus        69 ~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          69 RADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             HHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence             478999999999999987665322 12234679999999999999975

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.80  E-value=2.1e-18  Score=113.37  Aligned_cols=110  Identities=23%  Similarity=0.400  Sum_probs=84.0

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC-CcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC-
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH-GIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE-   89 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-   89 (168)
                      ++++|+.|.|+|++++++||+++||+++....+    ..+|+..+ +....+.....+         ..+..|++|.|+ 
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---------~~~~~h~~~~v~~   67 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA----GSVYLRCSEDDHHSLVLTEGD---------EPGVDALGFEVAS   67 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC----CeEEEecCCCCcEEEEEEeCC---------CCCceeEEEEcCC
Confidence            378999999999999999999999999887653    35666655 333333322211         136789999997 


Q ss_pred             --CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           90 --SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        90 --dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                        +++++.++|+++|+++...+....+ ..+.+||.||+||.||++..
T Consensus        68 ~~~v~~~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          68 EEDLEALAAHLEAAGVAPEEASDPEPG-VGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             HHHHHHHHHHHHHcCCceEEcCccCCC-CceEEEEECCCCCEEEEEEc
Confidence              6889999999999999876643332 34679999999999999974

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.80  E-value=1.7e-18  Score=120.66  Aligned_cols=122  Identities=23%  Similarity=0.297  Sum_probs=80.4

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      ++|+||+|.|+|++++++||+++|||+......  .......|+..++.  .+.+..           ....+..|++|.
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~-----------~~~~~~~Hiaf~   70 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTG-----------GNGPRLHHVAFW   70 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEec-----------CCCCceeEEEEE
Confidence            479999999999999999999999998764322  11112344433321  222211           112468899999


Q ss_pred             eCC---HHHHHHHHHHcCCeE--EeeeeeeCCeeEEEEEEECCCCCEEEEEeeCCCCCCCcc
Q 030972           88 CES---VGNVEKFLKEMGIKY--VRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVPLV  144 (168)
Q Consensus        88 v~d---l~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~~~~~p~~  144 (168)
                      |+|   +++++++|+++|+..  ...+........+.+||+|||||.|||++.......|..
T Consensus        71 v~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~~~~~~~~~  132 (161)
T cd07256          71 VPEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGDYYTGDPDN  132 (161)
T ss_pred             cCCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecCceeeCCCC
Confidence            985   777889999999863  222222221234679999999999999975543333433

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.80  E-value=1.9e-18  Score=114.50  Aligned_cols=112  Identities=27%  Similarity=0.394  Sum_probs=80.5

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC--CcEEEEeecCCCCCCCCCCCCCCCceEEEEEe
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH--GIGIHLLQSENPDSLPKKSVINPKDNHLSFQC   88 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v   88 (168)
                      ++++.|+.|.|+|++++++||+++||+++.....    ...|+...  .....+......         ..+..|++|.+
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~---------~~~~~hi~~~v   68 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----DRIYLRGLEEFIHHSLVLTKAP---------VAGLGHIAFRV   68 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----CeEEEEecCCCceEEEEEeeCC---------CCceeEEEEEC
Confidence            5789999999999999999999999999876543    23455421  122222221111         24678999999


Q ss_pred             C---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           89 E---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        89 ~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      .   ++++++++|+++|+++...+........+.+|+.|||||.|||...
T Consensus        69 ~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          69 RSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             CCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            4   7889999999999998765332221123579999999999999863

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.80  E-value=1.8e-18  Score=115.36  Aligned_cols=121  Identities=21%  Similarity=0.353  Sum_probs=87.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCC---CCcceeEEecCCcEEEEeecCCCCCCCC--CCCCCCCceEEEEEe
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGS---FNFDGAWLFGHGIGIHLLQSENPDSLPK--KSVINPKDNHLSFQC   88 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hl~~~v   88 (168)
                      ++||.|.|+|++++.+||+++|||+.......   .+...+++..++..+++++.........  ......+..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            57999999999999999999999999775442   1233566766777888887554322111  012356789999999


Q ss_pred             CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCC--CCEEEEEe
Q 030972           89 ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPD--GFMIEICD  134 (168)
Q Consensus        89 ~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPd--G~~iel~~  134 (168)
                      +|+++++++++++|+++...+......+...+++.|||  |+.|||++
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            99999999999999999877653222233334444555  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.80  E-value=2e-18  Score=114.70  Aligned_cols=109  Identities=26%  Similarity=0.456  Sum_probs=81.5

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEe--CC
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQC--ES   90 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v--~d   90 (168)
                      +|+|+.|.|+|++++.+||+++||++.....+    ...|+..++..+.+......       ....+..|++|.+  +|
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~~~~~~~~~~~~l~~~~~~-------~~~~~~~hi~f~v~~~d   69 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD----KGAYLEAGDLWLCLSVDANV-------GPAKDYTHYAFSVSEED   69 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC----CceEEecCCEEEEEecCCCC-------CCCCCeeeEEEEeCHHH
Confidence            47899999999999999999999999876543    23555555554444322211       1134678999998  48


Q ss_pred             HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           91 VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        91 l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +++++++|+++|+++...+.. .+   +.+||.|||||.|||....
T Consensus        70 l~~~~~~l~~~G~~~~~~~~~-~~---~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          70 FASLKEKLRQAGVKEWKENTS-EG---DSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHcCCcccCCCCC-Cc---cEEEEECCCCCEEEEEeCC
Confidence            999999999999998654322 22   5699999999999999753

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK06724 hypothetical protein; Provisional

Probab=99.80  E-value=3.1e-18  Score=115.01  Aligned_cols=112  Identities=25%  Similarity=0.404  Sum_probs=78.5

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHcc---CCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVL---GFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~L---G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      ..+++||.|.|+|++++++||+++|   |++....       .. +..+...+.+.....  ..    ....+..|+||.
T Consensus         5 ~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~-------~~-~~~g~~~l~l~~~~~--~~----~~~~g~~h~af~   70 (128)
T PRK06724          5 RAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNE-------VA-YSTGESEIYFKEVDE--EI----VRTLGPRHICYQ   70 (128)
T ss_pred             CcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee-------Ee-eeCCCeeEEEecCCc--cc----cCCCCceeEEEe
Confidence            5679999999999999999999966   5554311       01 112222333332211  11    112467899999


Q ss_pred             e---CCHHHHHHHHHHcCCeEEeeeeeeC--CeeEEEEEEECCCCCEEEEEeeC
Q 030972           88 C---ESVGNVEKFLKEMGIKYVRALVEEG--GILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        88 v---~dl~~~~~~l~~~g~~~~~~~~~~~--g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |   +++++++++|+++|+++...|....  +.+.+++||+|||||.|||+...
T Consensus        71 v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         71 AINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             cCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            8   5899999999999999976664422  34567899999999999998753

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=7.7e-18  Score=111.23  Aligned_cols=113  Identities=20%  Similarity=0.325  Sum_probs=80.0

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC--cEEEEeecCCCCCCC-CCCCCCCCceEEEEEeCCHH
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG--IGIHLLQSENPDSLP-KKSVINPKDNHLSFQCESVG   92 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~-~~~~~~~~~~hl~~~v~dl~   92 (168)
                      +..|.|+|++++++||+++|||+......    ....+..++  ..+.+...... ..+ ......+...|++|.|+|++
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~v~did   78 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD----WYVSLRSPDGGVELAFMLPGHE-TVPAAQYQFQGQGLILNFEVDDVD   78 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC----cEEEEecCCCceEEEEccCCCC-CCcchhcccCCceEEEEEEECCHH
Confidence            67899999999999999999999886532    223333333  23444433222 111 11122234469999999999


Q ss_pred             HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           93 NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        93 ~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +++++|+++|+++..++... +++.+.++|+||+||.|||++
T Consensus        79 ~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          79 AEYERLKAEGLPIVLPLRDE-PWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHHhcCCCeeeccccC-CCcceEEEEECCCCCEEEEEC
Confidence            99999999999987665543 234577999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=1e-17  Score=111.47  Aligned_cols=118  Identities=16%  Similarity=0.258  Sum_probs=80.5

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCC-----CC-CCCCCCCCCceEEEEE
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPD-----SL-PKKSVINPKDNHLSFQ   87 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~-~~~~~~~~~~~hl~~~   87 (168)
                      +.|+.|.|+|++++.+||+++|||+.........+  ..+..++..+.+.......     .. +.......+..|++|.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESGDY--GELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIAFV   78 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCCcE--EEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEEEE
Confidence            46999999999999999999999998654321111  1122333344443322110     00 0111122345799999


Q ss_pred             eCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           88 CESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        88 v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      |+|+++++++++++|+++..++...+ ++.+.++|.|||||.|||++
T Consensus        79 v~di~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~~~~~~  124 (125)
T cd07264          79 TDDVAAAFARAVEAGAVLVSEPKEKP-WGQTVAYVRDINGFLIELCS  124 (125)
T ss_pred             cCCHHHHHHHHHHcCCEeccCCccCC-CCcEEEEEECCCCCEEEEec
Confidence            99999999999999999987665443 34467899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.79  E-value=5.4e-18  Score=112.60  Aligned_cols=116  Identities=20%  Similarity=0.369  Sum_probs=82.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCC---cceeEEec----CCcEEEEeecCCCCCCCCCCCCCCCceEEE
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFN---FDGAWLFG----HGIGIHLLQSENPDSLPKKSVINPKDNHLS   85 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~---~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   85 (168)
                      +++||+|.|+|++++++||+++|||+...+....+   ....++..    ++..++++....... + ......+..|++
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~-~~~~~~~~~hi~   78 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGP-K-GRRGPGQIHHIA   78 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCC-C-CCCCCCcEEEEE
Confidence            47899999999999999999999999876543211   11223322    344677766544321 1 112234678999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEE
Q 030972           86 FQCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC  133 (168)
Q Consensus        86 ~~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~  133 (168)
                      |.++   ++++++++++++|+++...+.. .  +.+.+||+||+||.|||+
T Consensus        79 f~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~--~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          79 FSVPSEASLDAWRERLRAAGVPVSGVVDH-F--GERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCcccceEee-c--ceEEEEEECCCCCEEEeC
Confidence            9998   5799999999999998654332 2  347799999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.79  E-value=1.5e-17  Score=112.12  Aligned_cols=116  Identities=25%  Similarity=0.372  Sum_probs=83.5

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC---CcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH---GIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      +|+|++|.|+|++++++||+++||+++......  ....|+..+   ...+.++.......    .....+..|++|.|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~f~v~   74 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--GGLVFLSRDPDEHHQIALITGRPAAP----PPGPAGLNHIAFEVD   74 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--CcEEEEEecCCCceEEEEEecCCCCC----CCCCCCceEEEEEeC
Confidence            589999999999999999999999998765431  134455443   23566654433211    122357789999998


Q ss_pred             CHH---HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           90 SVG---NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        90 dl~---~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |++   +++++|.++|+++......  + ..+.+||.||+||.|||++...
T Consensus        75 ~~~~v~~~~~~l~~~G~~~~~~~~~--~-~~~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          75 SLDDLRDLYERLRAAGITPVWPVDH--G-NAWSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             CHHHHHHHHHHHHHCCCCccccCCC--C-ceeEEEEECCCCCEEEEEEcCC
Confidence            765   5789999999998764321  2 2367999999999999998654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.78  E-value=5e-18  Score=111.08  Aligned_cols=109  Identities=23%  Similarity=0.415  Sum_probs=80.1

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC--CHHH
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE--SVGN   93 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~--dl~~   93 (168)
                      |+.|.|+|++++++||+++||++...+.+    ...++..++..+.+......   .   ....+..|++|.|+  ++++
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~----~~~~~~~~~~~l~~~~~~~~---~---~~~~~~~hiaf~v~~~d~~~   70 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS----KEAYFELAGLWICLMEEDSL---Q---GPERTYTHIAFQIQSEEFDE   70 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC----ceeEEEecCeEEEeccCCCc---C---CCCCCccEEEEEcCHHHHHH
Confidence            89999999999999999999999876653    34455555555554432221   1   11346789999995  7999


Q ss_pred             HHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           94 VEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        94 ~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      ++++++++|+++........ .+.+.+|++|||||.|||...
T Consensus        71 ~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          71 YTERLKALGVEMKPERPRVQ-GEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHcCCccCCCccccC-CCceEEEEECCCCCEEEEEeC
Confidence            99999999999865432222 234679999999999999863

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=2.1e-17  Score=109.68  Aligned_cols=118  Identities=13%  Similarity=0.084  Sum_probs=82.0

Q ss_pred             EEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHHH
Q 030972           17 VSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNV   94 (168)
Q Consensus        17 v~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~~   94 (168)
                      -.|.|+|++++++||+++||++......  ......+.+..++..+.+.................+..|++|.|+|++++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~~   82 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDAH   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHHH
Confidence            4688999999999999999999986532  11111223444454555544333211110112235668999999999999


Q ss_pred             HHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           95 EKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        95 ~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +++|+++|+++..++.... ++.+.++++|||||.|+|.++
T Consensus        83 ~~~l~~~G~~v~~~~~~~~-~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          83 YERARAAGAEILREPTDTP-YGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             HHHHHHCCCEEeeCccccC-CCcEEEEEECCCCCEEEEecC
Confidence            9999999999987765443 334669999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.78  E-value=5.3e-18  Score=115.70  Aligned_cols=112  Identities=19%  Similarity=0.151  Sum_probs=81.1

Q ss_pred             eeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCc-EEEEeecCCCCCCCCCCCCCCCceEEEEEeCCH--
Q 030972           15 NHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGI-GIHLLQSENPDSLPKKSVINPKDNHLSFQCESV--   91 (168)
Q Consensus        15 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl--   91 (168)
                      +||.|.|+|++++++||+++|||+...+...   ..+|+...+. ..+.+....        ....+++|++|.|+|+  
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~---~~~~l~~~~~~~~h~~~~~~--------~~~~gl~Hiaf~v~~~~~   69 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED---RIVFMRCHPNPFHHTFAVGP--------ASSSHFHHVNFMVTDIDD   69 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC---EEEEEEcCCCCCcceeeecc--------CCCCceEEEEEECCCHHH
Confidence            5999999999999999999999998765431   3466654332 122221111        1235889999999854  


Q ss_pred             -HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           92 -GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        92 -~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                       ++++++|+++|+++...|........+.+||+||+|+.|||+....
T Consensus        70 v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          70 IGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             HHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence             5679999999999876665433234467999999999999998653

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=1.2e-17  Score=111.09  Aligned_cols=116  Identities=19%  Similarity=0.210  Sum_probs=77.0

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCC---CCCCCCCCCCceEEEE--EeCC
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS---LPKKSVINPKDNHLSF--QCES   90 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~hl~~--~v~d   90 (168)
                      ||.|.|+|++++++||+++|||++.....    ....+..++..+.+........   .........+..|++|  .++|
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~d   77 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----TWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSEEE   77 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----CcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeHHH
Confidence            99999999999999999999999865432    1122223344444433222111   0011111224467654  5679


Q ss_pred             HHHHHHHHHHcCCeEEeeeeee-CC--eeEEEEEEECCCCCEEEEEee
Q 030972           91 VGNVEKFLKEMGIKYVRALVEE-GG--ILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        91 l~~~~~~l~~~g~~~~~~~~~~-~g--~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +++++++|+++|+++..++... .+  ...+.+||.|||||.|||..+
T Consensus        78 v~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  125 (125)
T cd08357          78 FDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKAF  125 (125)
T ss_pred             HHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEeeC
Confidence            9999999999999998665432 11  234779999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.76  E-value=3.6e-17  Score=110.13  Aligned_cols=113  Identities=27%  Similarity=0.338  Sum_probs=81.4

Q ss_pred             eeEEEEeCCHHHHHHHHHHccCCeeeccCCC-CCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceEEEEEeCCH
Q 030972           15 NHVSLVCRNISESIDFYQNVLGFVPIRRPGS-FNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNHLSFQCESV   91 (168)
Q Consensus        15 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl   91 (168)
                      +||.|.|+|++++++||+++||++....... .....+|+..++.  .+.+.....          ..+..|++|.|+|+
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~hl~~~v~d~   70 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDPGVDAAAFLRCDEDHHDLALFPGPE----------RPGLHHVAFEVESL   70 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccCCceeEEEEEcCCCcceEEEEcCCC----------CCCeeEEEEEcCCH
Confidence            5999999999999999999999998654321 1123456554432  233332110          34789999999976


Q ss_pred             H---HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           92 G---NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        92 ~---~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +   +++++|+++|+++...+...+....+.++|.||+||.|||.+...
T Consensus        71 ~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          71 DDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence            4   688999999999986654333223466899999999999998654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=3.2e-17  Score=108.89  Aligned_cols=113  Identities=21%  Similarity=0.235  Sum_probs=79.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHc---cCCeeeccCCCCCcceeEEecC--CcEEEEeecCCCCCCCCCCCCCCCceEEEEEe
Q 030972           14 VNHVSLVCRNISESIDFYQNV---LGFVPIRRPGSFNFDGAWLFGH--GIGIHLLQSENPDSLPKKSVINPKDNHLSFQC   88 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~---LG~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v   88 (168)
                      ++|+.|.|+|++++++||+++   ||++......  + ..+++...  +..+.+......  .+   ....+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~~--~~---~~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P-GAVGYGKGGGGPDFWVTKPFDG--EP---ATAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C-ceeEeccCCCCceEEEeccccC--CC---CCCCCceEEEEEC
Confidence            579999999999999999998   6998876541  1 22333332  345666543321  11   1123457999999


Q ss_pred             CC---HHHHHHHHHHcCCeEEeeeeeeC--CeeEEEEEEECCCCCEEEEEe
Q 030972           89 ES---VGNVEKFLKEMGIKYVRALVEEG--GILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        89 ~d---l~~~~~~l~~~g~~~~~~~~~~~--g~~~~~~~~~DPdG~~iel~~  134 (168)
                      ++   ++++++++.++|+.+...+....  +...+.+||.|||||.|||+.
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~~  123 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAVC  123 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEeC
Confidence            86   78889999999999876654332  234467999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.76  E-value=4.6e-17  Score=106.11  Aligned_cols=109  Identities=21%  Similarity=0.287  Sum_probs=80.0

Q ss_pred             EEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHH
Q 030972           18 SLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKF   97 (168)
Q Consensus        18 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~~~~~   97 (168)
                      .|.|+|++++++||+++|||+.......  ....++..++..+++.........     ...+..|++|.++|++++.++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~   75 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHPE--PGYAFLSRGGAQLMLSEHDGDEPV-----PLGRGGSVYIEVEDVDALYAE   75 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcCC--CcEEEEEeCCEEEEEeccCCCCCC-----CCCCcEEEEEEeCCHHHHHHH
Confidence            5899999999999999999998776531  133445556666776654432110     234667999999999999999


Q ss_pred             HHHcCCe-EEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           98 LKEMGIK-YVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        98 l~~~g~~-~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      ++++|+. +..++.... .+.+.++|+||+||.|||++
T Consensus        76 l~~~G~~~~~~~~~~~~-~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          76 LKAKGADLIVYPPEDQP-WGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHcCCcceecCccCCC-cccEEEEEECCCCCEEEecC
Confidence            9999998 444443322 33467999999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=6.4e-17  Score=106.07  Aligned_cols=109  Identities=21%  Similarity=0.319  Sum_probs=79.4

Q ss_pred             EEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEe-cCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCC---HH
Q 030972           17 VSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF-GHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCES---VG   92 (168)
Q Consensus        17 v~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d---l~   92 (168)
                      +.|.|+|++++++||+++||++......    ...++. .++..+.++........   .....+..|++|.+++   ++
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~   74 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP----TFALFVLGSGVKLGLWSRHTVEPA---SDATGGGSELAFMVDDGAAVD   74 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC----ceEEEEeCCCcEEEEeeccccCCC---CCCCCCceEEEEEcCCHHHHH
Confidence            6789999999999999999999776432    123333 34556777654432111   1124567899999975   88


Q ss_pred             HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           93 NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        93 ~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +++++++++|+++..++...+ ++ +.++|+|||||.|||+.
T Consensus        75 ~~~~~~~~~g~~v~~~~~~~~-~g-~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          75 ALYAEWQAKGVKIIQEPTEMD-FG-YTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHHCCCeEecCccccC-Cc-cEEEEECCCCCEEEeeC
Confidence            899999999999987765432 23 56899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=3.1e-17  Score=109.28  Aligned_cols=115  Identities=20%  Similarity=0.208  Sum_probs=78.5

Q ss_pred             eeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC-CcEEEEeecCCCCC---CCCCCCCCCCceEEEEEeC-
Q 030972           15 NHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH-GIGIHLLQSENPDS---LPKKSVINPKDNHLSFQCE-   89 (168)
Q Consensus        15 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~---~~~~~~~~~~~~hl~~~v~-   89 (168)
                      .++.|.|+|++++++||++ |||+........  ...++..+ +..+.+........   .........+..|++|.|+ 
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v~~   78 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDE--KAACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSADS   78 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCC--CeEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeCCC
Confidence            5899999999999999987 899976533211  22333333 44565654321100   0000012345579999998 


Q ss_pred             --CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           90 --SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        90 --dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                        ++++++++++++|+++..++...++  .+.+||+|||||.|||++
T Consensus        79 ~~~vd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          79 REEVDELVEKALAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             HHHHHHHHHHHHHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence              5888999999999999876654432  356899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=6.1e-17  Score=105.91  Aligned_cols=106  Identities=20%  Similarity=0.213  Sum_probs=76.8

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC---CcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHH
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH---GIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVG   92 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~   92 (168)
                      +..|.|+|++++++||+++|||+......    ...++...   ...+.+......         .....|++|.|+|++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~v~d~~   69 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDHG----WIATFASPQNMTVQVSLATEGGT---------ATVVPDLSIEVDDVD   69 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcCC----ceEEEeecCCCCcEEEEecCCCC---------CCCCCEEEEEeCCHH
Confidence            45789999999999999999999865321    22333322   233444332211         124579999999999


Q ss_pred             HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           93 NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        93 ~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +++++|+++|+++...+.... ++.+.++|.||+||.|||++.
T Consensus        70 ~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          70 AALARAVAAGFAIVYGPTDEP-WGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHHhcCCeEecCCccCC-CceEEEEEECCCCCEEEEEEc
Confidence            999999999999887665433 344679999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=6.8e-17  Score=106.94  Aligned_cols=111  Identities=22%  Similarity=0.354  Sum_probs=78.6

Q ss_pred             eeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCC---H
Q 030972           15 NHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCES---V   91 (168)
Q Consensus        15 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d---l   91 (168)
                      .|+.|.|+|++++.+||+++||++...+.+.   ...|.. .+..+.+........      ...+..|++|.+++   +
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~------~~~~~~h~~f~v~~~~dl   72 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRDD---YAKFLL-EDPRLNFVLNERPGA------PGGGLNHLGVQVDSAEEV   72 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccCC---eeEEEe-cCCceEEEEecCCCC------CCCCeeEEEEEeCCHHHH
Confidence            4999999999999999999999987665431   223333 223344333222111      01477899999986   7


Q ss_pred             HHHHHHHHHcCCeEEeeeeeeC-CeeEEEEEEECCCCCEEEEEee
Q 030972           92 GNVEKFLKEMGIKYVRALVEEG-GILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        92 ~~~~~~l~~~g~~~~~~~~~~~-g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      ++++++|.++|+++...+.... +...+.+|++||+||.|||.+.
T Consensus        73 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          73 AEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             HHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence            8899999999999876543221 1234679999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.76  E-value=3.5e-17  Score=108.58  Aligned_cols=117  Identities=21%  Similarity=0.256  Sum_probs=77.7

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC-CcEEEEeecCCCCC-CCCCCCCCCCceEEEEEeC--
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH-GIGIHLLQSENPDS-LPKKSVINPKDNHLSFQCE--   89 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~-~~~~~~~~~~~~hl~~~v~--   89 (168)
                      ++||+|.|+|+++|++||+. |||+........  ..+.+..+ +..+.+........ .+.......+..|++|.+.  
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~   77 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADDE--PHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCETP   77 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCCC--CcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcCCH
Confidence            57999999999999999976 999976543311  12333333 44444433211100 0111112335678889875  


Q ss_pred             -CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           90 -SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        90 -dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                       |+++++++|+++|+++...+...+ ++.+.++|+|||||.|||+.
T Consensus        78 ~dvd~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~  122 (122)
T cd07235          78 AEVDALYAELVGAGYPGHKEPWDAP-WGQRYAIVKDPDGNLVDLFA  122 (122)
T ss_pred             HHHHHHHHHHHHCCCCcCCCCccCC-CCCEEEEEECCCCCEEEEeC
Confidence             899999999999999876654332 34466999999999999973

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=8.1e-17  Score=106.47  Aligned_cols=116  Identities=17%  Similarity=0.043  Sum_probs=82.3

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHH
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGN   93 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~   93 (168)
                      .+.|.|+|++++.+||+++||++......  ........+..++..+.+........ . ......+..|++|.|+|+++
T Consensus         4 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~-~-~~~~~~~~~~~~~~v~d~~~   81 (122)
T cd07246           4 TPYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHG-S-PASWGGTPVSLHLYVEDVDA   81 (122)
T ss_pred             eEEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccC-C-CCCCCCceEEEEEEeCCHHH
Confidence            35689999999999999999999876533  11112233444555666654332211 1 11223456899999999999


Q ss_pred             HHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           94 VEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        94 ~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +++++.++|+++..++.... .+.+.++++||+||.|+|.+
T Consensus        82 ~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          82 TFARAVAAGATSVMPPADQF-WGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHHCCCeEecCccccc-ccceEEEEECCCCCEEEEec
Confidence            99999999999987765332 34577999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.76  E-value=5.6e-17  Score=107.49  Aligned_cols=108  Identities=15%  Similarity=0.193  Sum_probs=78.1

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHHHH
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVE   95 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~~~   95 (168)
                      ...|.|+|++++++||++ |||+...+...   .-+++..++..+++......  .     ......|++|.|+|+++++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~~~~~~~~~~~l~l~~~~~~--~-----~~~~~~~~~~~v~dvd~~~   73 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA---GYMILRRGDLELHFFAHPDL--D-----PATSPFGCCLRLPDVAALH   73 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC---CEEEEEcCCEEEEEEecCcC--C-----CCCCcceEEEEeCCHHHHH
Confidence            468899999999999999 99998765432   22344555667777654321  1     1123468999999999999


Q ss_pred             HHHHHcCCeEEe-------eeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           96 KFLKEMGIKYVR-------ALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        96 ~~l~~~g~~~~~-------~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      ++|+++|+++..       .+... .++.+.++|+|||||.|||.+.
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~~~~~-~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          74 AEFRAAGLPETGSGIPRITPPEDQ-PWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHhCccccccCCCcccCCcCC-CCceeEEEEECCCCCEEEeecC
Confidence            999999998531       11111 2345779999999999999873

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.75  E-value=2.4e-17  Score=106.95  Aligned_cols=104  Identities=29%  Similarity=0.365  Sum_probs=75.2

Q ss_pred             EEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC----cEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHHH
Q 030972           19 LVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG----IGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNV   94 (168)
Q Consensus        19 l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~~   94 (168)
                      |.|+|++++++||+++|||+......    ..+.+..+.    ....+...... .     ....+..|++|.|+|++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~v~dv~~~   70 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLGFRFHDGVIEFLQFPDP-P-----GPPGGGFHLCFEVEDVDAL   70 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEETEEEEEEEEEEEEEESS-S-----SSSSSEEEEEEEESHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEeccchhhhhHHHccCCcc-c-----cCCCceeEEEEEEcCHHHH
Confidence            68999999999999999999988433    223333321    11233333221 1     2245789999999999999


Q ss_pred             HHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEE
Q 030972           95 EKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC  133 (168)
Q Consensus        95 ~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~  133 (168)
                      +++++++|+++...+.... ++.+.+++.|||||.|||+
T Consensus        71 ~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   71 YERLKELGAEIVTEPRDDP-WGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHHTTSEEEEEEEEET-TSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHCCCeEeeCCEEcC-CCeEEEEEECCCCCEEEeC
Confidence            9999999999988776654 2457799999999999986

...

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=1.1e-16  Score=105.83  Aligned_cols=116  Identities=19%  Similarity=0.304  Sum_probs=81.9

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC-cEEEEeecCCCCCCC--CCCCCCCCceEEEEEe--
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG-IGIHLLQSENPDSLP--KKSVINPKDNHLSFQC--   88 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~--~~~~~~~~~~hl~~~v--   88 (168)
                      +.++.|.|.|++++++||+++|||++..+...   ..+++..++ ..+.++.........  .......+..|++|.+  
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~~~---~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~   77 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKEDR---RLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAIPA   77 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecCCC---ceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEcCH
Confidence            45899999999999999999999998874221   234555554 445555433221000  0111234678999998  


Q ss_pred             CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           89 ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        89 ~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +|++++++++.++|+++...+...  .+.+.++|.|||||.|||++
T Consensus        78 ~dl~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          78 EELAEWEAHLEAKGVAIESEVQWP--RGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             HHHHHHHHHHHhcCCceeccccCC--CCeeEEEEECCCCCEEEEec
Confidence            489999999999999987654322  23467999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.75  E-value=4.3e-17  Score=124.30  Aligned_cols=120  Identities=20%  Similarity=0.234  Sum_probs=80.8

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCc-ceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNF-DGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      .+.+++|+||+|.|+|++++++||+++|||+...+..  .... ...|+..++. .+.+.....       ...++.+|+
T Consensus       140 ~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~g~~~Hi  211 (303)
T TIGR03211       140 GVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK-AHDIAFVGD-------PEPGKLHHV  211 (303)
T ss_pred             CcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC-CcccceecC-------CCCCceEEE
Confidence            3567899999999999999999999999999765421  1111 2344433221 111110000       111237899


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           85 SFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        85 ~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      ||.|+|   +++++++|+++|+++..+|...+....+++||.||+||.|||...
T Consensus       212 af~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  265 (303)
T TIGR03211       212 SFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFGG  265 (303)
T ss_pred             EEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEecC
Confidence            999986   555788999999998766543332234679999999999999844

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.75  E-value=6.9e-17  Score=105.83  Aligned_cols=103  Identities=17%  Similarity=0.289  Sum_probs=71.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEec-CCc--EEEEeecCCCCCCCCCCCCCCCceE--EEEE
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFG-HGI--GIHLLQSENPDSLPKKSVINPKDNH--LSFQ   87 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~--~~~l~~~~~~~~~~~~~~~~~~~~h--l~~~   87 (168)
                      +|+||.|.|.|++++.+||+ +|||++..+.+     ..++.. +..  .+.+....           ..+..|  +.+.
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~   64 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD-----GLELRTAGNDHRWARLLEGA-----------RKRLAYLSFGIF   64 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC-----ceEEEecCCCceEEEeecCC-----------CCceeeEEEEeE
Confidence            68999999999999999998 69999875432     233322 222  22222211           112344  4555


Q ss_pred             eCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           88 CESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        88 v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      ++|+++++++|+++|+++...+.. .+  .+.+||.||+||.|||...
T Consensus        65 ~~d~~~~~~~l~~~Gi~~~~~~~~-~~--~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          65 EDDFAAFARHLEAAGVALAAAPPG-AD--PDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             hhhHHHHHHHHHHcCCceecCCCc-CC--CCEEEEECCCCCEEEEecC
Confidence            579999999999999998765422 22  2459999999999999964

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.74  E-value=6.8e-17  Score=104.11  Aligned_cols=112  Identities=29%  Similarity=0.431  Sum_probs=85.7

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHHHH
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVE   95 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~~~   95 (168)
                      |+.+.|+|++++.+||+++||++............+++..++..+++.........    ....+..|++|.++|+++++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~   76 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLGGTRLELFEGDEPAPA----PSGGGGVHLAFEVDDVDAAY   76 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecCCceEEEecCCCCCCc----ccCCCeeEEEEECCCHHHHH
Confidence            88999999999999999999999887654211234555555667888776554221    23457789999999999999


Q ss_pred             HHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEE
Q 030972           96 KFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI  132 (168)
Q Consensus        96 ~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel  132 (168)
                      ++|+++|+.+...+.... .+.+.+++.||+||.|||
T Consensus        77 ~~l~~~g~~~~~~~~~~~-~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          77 ERLKAAGVEVLGEPREEP-WGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHcCCcccCCCcCCC-CCcEEEEEECCCCcEEeC
Confidence            999999999887654222 234679999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=1e-16  Score=105.37  Aligned_cols=104  Identities=19%  Similarity=0.284  Sum_probs=76.3

Q ss_pred             EEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHHHHH
Q 030972           17 VSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEK   96 (168)
Q Consensus        17 v~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~~~~   96 (168)
                      ..|.|+|++++++||++ |||+.....+    ..+++..++..+.+.......        ..+..+++|.|+|++++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~l~~~~~~l~l~~~~~~~--------~~~~~~~~~~v~did~~~~   71 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND----NLAYFRLGNCAFYLQDYYVKD--------WAENSMLHLEVDDLEAYYE   71 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC----CEEEEEcCCEEEEeecCCCcc--------cccCCEEEEEECCHHHHHH
Confidence            46889999999999998 9999987643    346666666666654322111        1234689999999999999


Q ss_pred             HHHHcCCeEEe-----eeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           97 FLKEMGIKYVR-----ALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        97 ~l~~~g~~~~~-----~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +|+++|+++..     .+... .++.+.++|+|||||.|+|.+
T Consensus        72 ~l~~~G~~~~~~~~~~~~~~~-~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          72 HIKALGLPKKFPGVKLPPITQ-PWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHcCCcccccceecCcccc-CCCcEEEEEECCCccEEEeeC
Confidence            99999987532     22222 234578999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=2.8e-16  Score=104.92  Aligned_cols=108  Identities=16%  Similarity=0.171  Sum_probs=72.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCC-------------cceeEEec----CCcEEEEeecCCCCCCCCCC
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFN-------------FDGAWLFG----HGIGIHLLQSENPDSLPKKS   75 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-------------~~~~~~~~----~~~~~~l~~~~~~~~~~~~~   75 (168)
                      ++.|++|.|+|+++|++||+++|||+...+....+             +..+++..    .+..++|.........    
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~----   77 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDY----   77 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCC----
Confidence            67899999999999999999999999866432111             11122322    1234556543332111    


Q ss_pred             CCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           76 VINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        76 ~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      ..+.+  |++|.|++. ++.++|+++|+++...+.   +    .+|+.||||+.|||+.
T Consensus        78 ~~g~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~---~----~~fi~DPDG~~ie~~~  126 (127)
T cd08358          78 ELGND--FLGITIHSK-QAVSNAKKHNWPVTEVED---G----VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCCC--EEEEEEECH-HHHHHHHHCCCceecCCC---C----EEEEECCCCCEEEEec
Confidence            11223  666666666 556999999999876432   2    4899999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.72  E-value=2e-16  Score=120.07  Aligned_cols=118  Identities=23%  Similarity=0.385  Sum_probs=80.6

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC--CCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS--FNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      +.+.+++||+|.|+|++++.+||+++|||+.......  ......|+...+.  .+.+..           ....+.+|+
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~Hi  200 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVHDIALTN-----------GNGPRLHHI  200 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcCceEeec-----------CCCCceeeE
Confidence            4678999999999999999999999999998654321  1112344432221  122211           113578999


Q ss_pred             EEEeCC---HHHHHHHHHHcCCe--EEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           85 SFQCES---VGNVEKFLKEMGIK--YVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        85 ~~~v~d---l~~~~~~l~~~g~~--~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ||.|+|   ++++.++|+++|++  +...|........+++|++||+||.|||++...
T Consensus       201 af~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~~  258 (294)
T TIGR02295       201 AYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGDY  258 (294)
T ss_pred             EEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEeccc
Confidence            999997   55568999999997  543433222113466999999999999998643

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.72  E-value=2.4e-16  Score=119.33  Aligned_cols=114  Identities=15%  Similarity=0.203  Sum_probs=82.1

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCC
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCES   90 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d   90 (168)
                      +.+++|++|.|+|++++++||+++|||+...+...   ...|+..+.....+......         ..+..|++|.|++
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~~---~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~f~V~~   68 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGEN---DALYLRLDSRAHRIAVHPGE---------SDDLAYAGWEVAD   68 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCCC---ceEEEEcCCCceEEEEEECC---------cCCeeeEeeeeCC
Confidence            46899999999999999999999999987654331   23454554332223222221         1256799999997


Q ss_pred             ---HHHHHHHHHHcCCeEEeeeeee--CCeeEEEEEEECCCCCEEEEEeeC
Q 030972           91 ---VGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        91 ---l~~~~~~l~~~g~~~~~~~~~~--~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                         ++++.++|+++|+++...+...  .....+.++|.|||||.|||+...
T Consensus        69 ~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~  119 (286)
T TIGR03213        69 EAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGA  119 (286)
T ss_pred             HHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcc
Confidence               8899999999999987654311  111346699999999999999854

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.71  E-value=2e-16  Score=120.58  Aligned_cols=111  Identities=22%  Similarity=0.341  Sum_probs=81.7

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC----CcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH----GIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      +++++|+.|.|+|++++++||+++|||+...+..    ..+++...    ...+.+...           ...+..|++|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~-----------~~~g~~hiaf   66 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG----QRVYLKAWDEWDHYSVILTEA-----------DTAGLDHMAF   66 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC----ceEEEEeccccccceEeeccC-----------CCCceeEEEE
Confidence            5689999999999999999999999999876543    23344321    122222211           1236799999


Q ss_pred             EeC---CHHHHHHHHHHcCCeEEeeeee-eCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           87 QCE---SVGNVEKFLKEMGIKYVRALVE-EGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        87 ~v~---dl~~~~~~l~~~g~~~~~~~~~-~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .|+   ++++++++|+++|+++...+.. ..+ ..+.+||.|||||.|||++...
T Consensus        67 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~-~g~~~~~~DPdG~~iEl~~~~~  120 (303)
T TIGR03211        67 KVESEADLERLVKRLEAYGVGTGWIPAGELPG-VGRRVRFTLPSGHTMELYAEKE  120 (303)
T ss_pred             EeCCHHHHHHHHHHHHHcCCCeeeccCCCCCC-cceEEEEECCCCCEEEEEEccc
Confidence            997   7889999999999998765431 122 2356999999999999998654

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=5.6e-16  Score=102.30  Aligned_cols=114  Identities=20%  Similarity=0.217  Sum_probs=79.8

Q ss_pred             EEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCC--CCCCCCCCCCceEEEEEe---CCH
Q 030972           17 VSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS--LPKKSVINPKDNHLSFQC---ESV   91 (168)
Q Consensus        17 v~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~hl~~~v---~dl   91 (168)
                      |.|.|+|++++.+||+++|||++..+..   ....++..++..+.+++......  .........+..|++|.+   +|+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   78 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADSN---DGVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEEEV   78 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccCC---CceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHHHH
Confidence            6899999999999999999999876622   13455655666677665332111  000101223455677765   589


Q ss_pred             HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           92 GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        92 ~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +++++++++.|+++...+...+ ++.+.++|.||+||+|||..
T Consensus        79 ~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          79 DAVLARAAAAGATIVKPPQDVF-WGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHhCCCEEecCCccCC-CCceEEEEECCCCCEEEEee
Confidence            9999999999999986654332 33577999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.71  E-value=3.9e-16  Score=118.21  Aligned_cols=117  Identities=16%  Similarity=0.236  Sum_probs=80.5

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC---CCC--cceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG---SFN--FDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLS   85 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   85 (168)
                      ..+|+||.|.|+|++++.+||+++|||+......   ..+  ...+|+..++....+.....        ....+.+|++
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~--------~~~~~~~Hia  211 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAG--------PSEKRLNHLM  211 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecC--------CCCCceEEEE
Confidence            4689999999999999999999999999765421   111  12455554432211211111        1134789999


Q ss_pred             EEeCCHHH---HHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           86 FQCESVGN---VEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        86 ~~v~dl~~---~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |.|+|+++   +.++|+++|+ ....+........+++||+||+||+|||....
T Consensus       212 f~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~~  264 (286)
T TIGR03213       212 LEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWGA  264 (286)
T ss_pred             EEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecCc
Confidence            99997776   7999999999 44333322223457799999999999998754

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.69  E-value=9.1e-16  Score=116.50  Aligned_cols=108  Identities=21%  Similarity=0.303  Sum_probs=81.2

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC--C--cEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH--G--IGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      +.+++||.|.|+|++++++||+++|||++..+..    ..+|+...  .  ..+.+..  ..         ..+..|++|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~~~~~~~~~~~~~~~l~l~~--~~---------~~~~~hiaf   66 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK----EYIYLRGIEEFQHHSLVLTK--AP---------SAALSYIGF   66 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC----CeEEEeccCcCCceEEEeee--CC---------CcCccEEEE
Confidence            6789999999999999999999999999876543    23445322  1  1222221  11         236789999


Q ss_pred             EeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           87 QCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        87 ~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      .|+   |+++++++|+++|+++...+...   ..+.+||+|||||.|||++..
T Consensus        67 ~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~---~~~~~~~~DPdG~~iEl~~~~  116 (294)
T TIGR02295        67 RVSKEEDLDKAADFFQKLGHPVRLVRDGG---QPEALRVEDPFGYPIEFYFEM  116 (294)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEeecCCC---CceEEEEECCCCCEEEEEEch
Confidence            997   78899999999999987654321   237799999999999999854

The enzyme from Bacillus brevis contains manganese.

>PLN02300 lactoylglutathione lyase

Probab=99.65  E-value=5.3e-15  Score=112.04  Aligned_cols=123  Identities=18%  Similarity=0.205  Sum_probs=88.2

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCC----cEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHG----IGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      ..++.|+.|.|+|++++.+||+++|||+......  ..++...++..++    ..+++......    .....+++..|+
T Consensus       152 ~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~----~~~~~g~~~~~i  227 (286)
T PLN02300        152 PEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGV----TEYTKGNAYAQI  227 (286)
T ss_pred             CCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCC----CccccCCceeEE
Confidence            4578899999999999999999999999875422  1233344443222    12333221111    011224577899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           85 SFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        85 ~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +|.|+|+++++++++++|+++..+|...++...+.++|.||||+.++|++.+.
T Consensus       228 ~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~  280 (286)
T PLN02300        228 AIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNID  280 (286)
T ss_pred             EEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccch
Confidence            99999999999999999999988776555433466889999999999998754

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.62  E-value=2.3e-15  Score=98.30  Aligned_cols=96  Identities=24%  Similarity=0.379  Sum_probs=73.6

Q ss_pred             eeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCceEEEEEeCC
Q 030972           15 NHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDNHLSFQCES   90 (168)
Q Consensus        15 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d   90 (168)
                      +||+|.|+|+++|++||+++||+.......  .......++..++  ..++|+++....+ ... ....|++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~-~~~-~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDS-PLD-RGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTC-HHH-HTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCc-ccc-cCCCCEEEEEEEeCC
Confidence            699999999999999999999998765322  2334455666665  5899999877641 111 256789999999999


Q ss_pred             HHHHHHHHHHcCCeEEeeeeee
Q 030972           91 VGNVEKFLKEMGIKYVRALVEE  112 (168)
Q Consensus        91 l~~~~~~l~~~g~~~~~~~~~~  112 (168)
                      ++++.++|+++|+++...+...
T Consensus        79 ~d~~~~~l~~~G~~~~~~~~~~  100 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEGPRP  100 (109)
T ss_dssp             HHHHHHHHHHTTECEEECEEEE
T ss_pred             HHHHHHHHHHCCCEEcccCccc
Confidence            9999999999999988765433

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.60  E-value=9.6e-14  Score=91.66  Aligned_cols=118  Identities=16%  Similarity=0.142  Sum_probs=84.4

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCceEEEEEe
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDNHLSFQC   88 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v   88 (168)
                      ...+.|..|.|.|++++++||+++||++........+...+.+..++  ..-.+......       ........+.|.|
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~~~~~gG~l~~~~~~-------~p~~~~~~iy~~v   79 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARPGS-------PPGGGGWVIYFAV   79 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEECCCccccceeccCCcC-------CCCCCCEEEEEec
Confidence            45688999999999999999999999998776432223333332222  11111111110       1124567888899


Q ss_pred             CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           89 ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        89 ~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +|+++..+++.+.|.+++.++...++ ..+.+.|.||+||+|.|.+..
T Consensus        80 ~did~~l~rv~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          80 DDIDATLERVVAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CChHHHHHHHHhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeecC
Confidence            99999999999999999988776654 457799999999999999753

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.57  E-value=9.1e-14  Score=93.46  Aligned_cols=123  Identities=21%  Similarity=0.333  Sum_probs=84.1

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC---------------------CCcceeEEecCCcEEEEeecCCCC
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS---------------------FNFDGAWLFGHGIGIHLLQSENPD   69 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---------------------~~~~~~~~~~~~~~~~l~~~~~~~   69 (168)
                      -..+.|..+.++|+.+++.||.+++|+........                     .....+|+......+++...-...
T Consensus        20 t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gte   99 (170)
T KOG2944|consen   20 TYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTE   99 (170)
T ss_pred             hhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCC
Confidence            34467888888888888888888888877542210                     001125555555566666555444


Q ss_pred             CCC-CC----CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           70 SLP-KK----SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        70 ~~~-~~----~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +.+ ..    +....|++||||.|+|+..++++|+++|+++...+.  .|.....+|+.||||+.|||...
T Consensus       100 s~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~--dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  100 SPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLK--DGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCC--CccccceeEEECCCCCeEEEeec
Confidence            333 11    122248999999999999999999999999765443  34333459999999999999864

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.54  E-value=3.4e-13  Score=85.95  Aligned_cols=120  Identities=21%  Similarity=0.246  Sum_probs=82.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEE--ecCCcEEEEeecCCCCCCCCC--CCCCCCceEE--EE
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWL--FGHGIGIHLLQSENPDSLPKK--SVINPKDNHL--SF   86 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hl--~~   86 (168)
                      .+-|+++.|.|++++.+||.++||++.-...+      .|+  ..-++++........++....  ....-...|+  .+
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvVl   77 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVVL   77 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccccc------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEEE
Confidence            46799999999999999999999998665543      233  233455444433333221110  0111223455  45


Q ss_pred             EeCCHHHHHHHHHHcCCeEEeeeeeeC-Ce--eEEEEEEECCCCCEEEEEeeCCC
Q 030972           87 QCESVGNVEKFLKEMGIKYVRALVEEG-GI--LVEQLFFHDPDGFMIEICDCDNL  138 (168)
Q Consensus        87 ~v~dl~~~~~~l~~~g~~~~~~~~~~~-g~--~~~~~~~~DPdG~~iel~~~~~~  138 (168)
                      .++|.-++.++|+++|+.+..+|.... |.  ..+++|+.||.||.+|+.+....
T Consensus        78 ~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~~  132 (138)
T COG3565          78 PVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRDQ  132 (138)
T ss_pred             EHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccch
Confidence            567999999999999999888775432 32  46889999999999999988753

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.52  E-value=2.4e-13  Score=87.94  Aligned_cols=120  Identities=21%  Similarity=0.265  Sum_probs=83.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCC---CCCCCCCCCceEEEEEeC
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSL---PKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~hl~~~v~   89 (168)
                      ..--|.|.|+|++++.+||+. |||+......+ +.....+..+..-+.|.+......-   ............+++.+.
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sd-e~a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls~~   80 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSD-EDAACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLSAG   80 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccc-ccceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEeccC
Confidence            344789999999999999997 99998876542 2234444445444444433322211   112233456688899886


Q ss_pred             ---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           90 ---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        90 ---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                         +++++.+++.+.|.+...++...+  ..+...|+|||||.||+++..
T Consensus        81 s~eevd~~v~ka~eaGGk~~~~~~d~g--fMYg~~fqDpDGh~wE~l~m~  128 (133)
T COG3607          81 SREEVDELVDKALEAGGKPANEPQDEG--FMYGRSFQDPDGHVWEFLWMD  128 (133)
T ss_pred             cHHHHHHHHHHHHHcCCCCCCCccccc--cccceeeeCCCCCeEEEEEeC
Confidence               678889999999999876665544  345589999999999999976

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.50  E-value=8.8e-13  Score=96.35  Aligned_cols=115  Identities=27%  Similarity=0.345  Sum_probs=86.9

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCc-EEEEeecCCCCCCCCCCCCCCCceEEEEEeC-
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGI-GIHLLQSENPDSLPKKSVINPKDNHLSFQCE-   89 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-   89 (168)
                      +.+..+.|.|+|+++...||+++||+++..+..    ..+-+..++. -+.|.+..+....+   ....|..|++|.++ 
T Consensus         9 ~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~----~~v~L~vgg~~LL~L~q~~~a~~~~---~~~aGLyH~AfLlP~   81 (265)
T COG2514           9 TFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD----GSVTLGVGGTPLLTLEQFPDARRPP---PRAAGLYHTAFLLPT   81 (265)
T ss_pred             cEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC----ceEEEeeCCEEEEEEEeCCCCCCCC---ccccceeeeeeecCC
Confidence            468999999999999999999999999998876    3344555554 44555544442221   23579999999998 


Q ss_pred             --CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           90 --SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        90 --dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                        |+.++..++.+.|+.+.... ..  .....+||.||+||=||++..+
T Consensus        82 r~~L~~~l~hl~~~~~~l~Ga~-DH--~vSEAlYl~DPEGNGIEiYaDr  127 (265)
T COG2514          82 REDLARVLNHLAEEGIPLVGAS-DH--LVSEALYLEDPEGNGIEIYADR  127 (265)
T ss_pred             HHHHHHHHHHHHhcCCcccccC-cc--hhheeeeecCCCCCeEEEEecC
Confidence              68888899999999996321 11  1335699999999999999875

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.41  E-value=1.4e-12  Score=93.25  Aligned_cols=99  Identities=17%  Similarity=0.222  Sum_probs=71.0

Q ss_pred             cceeeeEEEEeC--CHHHHHHHHHHccCCeeeccCCCC----CcceeEEec--CCcEEEEeecCCCCCC--CCC---CCC
Q 030972           11 LKSVNHVSLVCR--NISESIDFYQNVLGFVPIRRPGSF----NFDGAWLFG--HGIGIHLLQSENPDSL--PKK---SVI   77 (168)
Q Consensus        11 ~~~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~--~~~~~~l~~~~~~~~~--~~~---~~~   77 (168)
                      +++++||++.|+  |++++++||+++|||+........    ......+..  ++..+.|.++......  ...   ...
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~   80 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYG   80 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhC
Confidence            368999999999  999999999999999987653311    112233433  3346667665542111  000   123


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHHcCCeEEeee
Q 030972           78 NPKDNHLSFQCESVGNVEKFLKEMGIKYVRAL  109 (168)
Q Consensus        78 ~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~  109 (168)
                      +.|.+|+||.|+|+++++++|+++|+++...|
T Consensus        81 G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P  112 (191)
T cd07250          81 GAGVQHIALATDDIFATVAALRARGVEFLPIP  112 (191)
T ss_pred             CCceeEEEEECCCHHHHHHHHHHcCCeeccCc
Confidence            57889999999999999999999999998765

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.28  E-value=2.1e-11  Score=80.59  Aligned_cols=119  Identities=25%  Similarity=0.345  Sum_probs=72.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcc---eeEEecCCc--EEEEeecC------CCCCCCCCC-CCC--
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFD---GAWLFGHGI--GIHLLQSE------NPDSLPKKS-VIN--   78 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~---~~~~~~~~~--~~~l~~~~------~~~~~~~~~-~~~--   78 (168)
                      +++|++|.|+|++++++||+++||++...........   ...+.....  ........      ......... ...  
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            6899999999999999999999999998865422111   111111110  00100000      000000000 011  


Q ss_pred             -CCceEEEEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           79 -PKDNHLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        79 -~~~~hl~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                       .+..|+++.+++   .......+...|..+..... ..  ....+||.||||+.||+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~--~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GR--GGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEeeCCCCCEEEeecC-CC--cceEEEEECCCCcEEEeeC
Confidence             247899999997   66667777777888766543 21  1126999999999999974

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.27  E-value=1.7e-10  Score=89.96  Aligned_cols=124  Identities=15%  Similarity=0.139  Sum_probs=84.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeecc-CCCCCcceeEEecCCcEEEEeecCCCCCCCCC--CCCCCCceEEEEEeC
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRR-PGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK--SVINPKDNHLSFQCE   89 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hl~~~v~   89 (168)
                      +++|+.|.|+|++++++||++.|||+.... ....+.....+..++..+.|.......+....  ...+.+..|++|.|+
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V~   81 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRVD   81 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCceeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEEC
Confidence            689999999999999999999999998875 11111122334456667777765544211111  134578899999999


Q ss_pred             CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           90 SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        90 dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |++++++++.++|+++...+...........-+..++|..+-|++..
T Consensus        82 Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~  128 (353)
T TIGR01263        82 DAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRG  128 (353)
T ss_pred             CHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCC
Confidence            99999999999999998766432101122334456677777777643

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.26  E-value=2.5e-10  Score=76.50  Aligned_cols=110  Identities=20%  Similarity=0.057  Sum_probs=72.0

Q ss_pred             EEEEe-CCHHHHHHHHHHccCCeeeccCCCC------------CcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceE
Q 030972           17 VSLVC-RNISESIDFYQNVLGFVPIRRPGSF------------NFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNH   83 (168)
Q Consensus        17 v~l~v-~D~~~a~~FY~~~LG~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (168)
                      ..|.+ .|.++|++||+++||+++.......            .....-+..++..+.+...... ...    ......+
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~-~~~----~~~~~~~   77 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPG-FPF----TFGNGIS   77 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCC-CCC----CCCCCEE
Confidence            35667 9999999999999999988643210            0112333445555655543322 111    1234578


Q ss_pred             EEEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEE
Q 030972           84 LSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC  133 (168)
Q Consensus        84 l~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~  133 (168)
                      +++.++|   +++++++|.+.| ++..++... .++.+..+++||+|+.|+|.
T Consensus        78 l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~-~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          78 LSVECDSEEEADRLFEALSEGG-TVLMPLQKT-FWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEEECCCHHHHHHHHHHHhcCC-eEeccchhc-CcccccEEEECCCCCEEEeC
Confidence            8999886   667889987766 666555443 34456799999999999983

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.25  E-value=6.5e-11  Score=92.27  Aligned_cols=103  Identities=13%  Similarity=0.241  Sum_probs=73.1

Q ss_pred             CCCccceeeeEEEEeC--CHHHHHHHHHHccCCeeeccCCC-C---CcceeEEec--CCcEEEEeecCCCCCCC--C---
Q 030972            7 NPLHLKSVNHVSLVCR--NISESIDFYQNVLGFVPIRRPGS-F---NFDGAWLFG--HGIGIHLLQSENPDSLP--K---   73 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~-~---~~~~~~~~~--~~~~~~l~~~~~~~~~~--~---   73 (168)
                      +.+.+.+++||++.|.  |++++++||+++|||+......- .   ......+..  +...++|.++.......  .   
T Consensus       152 ~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl  231 (353)
T TIGR01263       152 PGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFL  231 (353)
T ss_pred             CCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHH
Confidence            4567899999999999  99999999999999998764321 1   111122332  34567776643221111  1   


Q ss_pred             CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeee
Q 030972           74 KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRAL  109 (168)
Q Consensus        74 ~~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~  109 (168)
                      ....+.|.+||||.|+|+++++++|+++|+++...|
T Consensus       232 ~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       232 EFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             HHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            112357899999999999999999999999988765

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.20  E-value=1.6e-10  Score=82.98  Aligned_cols=115  Identities=18%  Similarity=0.199  Sum_probs=80.4

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC-------------CCcceeEEecCCcEEEEeecCCCCCCCCCCCCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS-------------FNFDGAWLFGHGIGIHLLQSENPDSLPKKSVIN   78 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   78 (168)
                      .+.-|+++.|.|.+++++||+++|||++....+.             ..+...++..+.-..|++..-..+-....+..+
T Consensus        16 ~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~YelG   95 (299)
T KOG2943|consen   16 RRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYELG   95 (299)
T ss_pred             hheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceecc
Confidence            3556999999999999999999999999764321             112234455554444444433333333344667


Q ss_pred             CCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           79 PKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +++.|+.+.++|+-...+.++..|.+-       .|.+.  +++.||||+.|+|.+.
T Consensus        96 ndfg~i~I~s~dv~~~ve~v~~p~~~~-------~g~~~--~~v~dPdGykF~l~~~  143 (299)
T KOG2943|consen   96 NDFGGITIASDDVFSKVEKVNAPGGKG-------SGCGI--AFVKDPDGYKFYLIDR  143 (299)
T ss_pred             CCcccEEEeHHHHHHHHHHhcCcCCcc-------cceEE--EEEECCCCcEEEEecc
Confidence            899999999999888888887765522       23333  8899999999999983

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=99.19  E-value=2.3e-10  Score=87.09  Aligned_cols=105  Identities=15%  Similarity=0.109  Sum_probs=71.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC---
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE---   89 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~---   89 (168)
                      +.-||+|.|+|++++.+||+++|++.. ...+    ....+  +...+.+.....+       ........+|+.++   
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde----~a~cm--~dtI~vMllt~~D-------~~~~~evLl~Ls~~Sre  312 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC-WDGD----KLFLL--GKTSLYLQQTKAE-------KKNRGTTTLSLELECEH  312 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC-CCCC----ccccc--cCcEEEEEecCCC-------CCCcceEEEEeccCCHH
Confidence            445999999999999999999988885 3222    11212  3333333332221       22345678899987   


Q ss_pred             CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           90 SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        90 dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +++++.+++.++|.+....+... |.   .-.|.|||||.||+++.
T Consensus       313 ~VD~lv~~A~aaGG~~~~~~~D~-Gf---~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        313 DFVRFLRRWEMLGGELGEQADGH-FP---LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             HHHHHHHHHHHcCCCCCCCcccc-cC---cceeECCCCCEEEEEEE
Confidence            57788999999998664443333 43   47899999999999975

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.10  E-value=9.1e-10  Score=79.15  Aligned_cols=117  Identities=16%  Similarity=0.237  Sum_probs=80.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCceEEEEE--e
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDNHLSFQ--C   88 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~--v   88 (168)
                      .+..|.|.|.|++++++||+++|||++.....  .+..+.+..+.  ..++|.........      ..++..++|.  .
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ilekee--k~t~~~mgYgd~q~~LElt~~~~~id~------~kg~griafaip~  220 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEKEE--KYTRARMGYGDEQCVLELTYNYDVIDR------AKGFGRIAFAIPT  220 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhhhh--hhhhhhhccCCcceEEEEEeccCcccc------cccceeEEEeccc
Confidence            46789999999999999999999999987432  12333344443  35555544433111      2245555555  4


Q ss_pred             CCHHHHHHHHHHcCCeEEeeeeeeC---CeeEEEEEEECCCCCEEEEEeeCC
Q 030972           89 ESVGNVEKFLKEMGIKYVRALVEEG---GILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        89 ~dl~~~~~~l~~~g~~~~~~~~~~~---g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +++..+.+.++..+-++..+.....   +.....+.+.||||+.|+|+..+.
T Consensus       221 d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~  272 (299)
T KOG2943|consen  221 DDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEG  272 (299)
T ss_pred             cccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHH
Confidence            6888888999988777665543322   235667889999999999998764

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.03  E-value=1e-09  Score=85.95  Aligned_cols=100  Identities=12%  Similarity=0.176  Sum_probs=72.3

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC-------CcceeEEecC--CcEEEEeecCCC---CCCCCC---
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF-------NFDGAWLFGH--GIGIHLLQSENP---DSLPKK---   74 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-------~~~~~~~~~~--~~~~~l~~~~~~---~~~~~~---   74 (168)
                      .+.+|+||++.|.+++.++.||+++|||+..+.....       ......+...  ...+.|.++...   .+....   
T Consensus       177 gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL~  256 (398)
T PLN02875        177 GLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYLE  256 (398)
T ss_pred             CcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHHH
Confidence            4679999999999999999999999999887543211       1123334333  246777776431   111111   


Q ss_pred             CCCCCCceEEEEEeCCHHHHHHHHHHc----CCeEEeee
Q 030972           75 SVINPKDNHLSFQCESVGNVEKFLKEM----GIKYVRAL  109 (168)
Q Consensus        75 ~~~~~~~~hl~~~v~dl~~~~~~l~~~----g~~~~~~~  109 (168)
                      ...+.|++||||.++|+.++.++|+++    |+++...|
T Consensus       257 ~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        257 HNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             hcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            134589999999999999999999999    99998855

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.96  E-value=5.3e-08  Score=65.48  Aligned_cols=117  Identities=20%  Similarity=0.066  Sum_probs=77.0

Q ss_pred             EEEEeC-CHHHHHHHHHHccCCeeeccCCCCC------------cceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceE
Q 030972           17 VSLVCR-NISESIDFYQNVLGFVPIRRPGSFN------------FDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNH   83 (168)
Q Consensus        17 v~l~v~-D~~~a~~FY~~~LG~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (168)
                      -.|..+ |-++|++||+++||.+...+....+            .-.+-+..++..+.+........   .....+--..
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~---~~~~~~~s~~   80 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMG---ATEGGGTSLS   80 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccC---cccCCCeeEE
Confidence            356778 9999999999999999887533222            11222334444444433322211   1011223356


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           84 LSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        84 l~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |-+.++|++++++++.+.|+++..+..... ++.+...+.||.|+.|-|.....
T Consensus        81 l~~~~~d~da~f~~a~~aGa~v~mpl~~~f-wG~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          81 LDLYVEDVDAVFERAAAAGATVVMPLEDTF-WGDRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEehHHHHHHHHHHhcCCeEEecchhcC-cccceEEEECCCCCEEEEecCcc
Confidence            666777899999999999988887765543 33456899999999999987643

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.90  E-value=1.1e-08  Score=76.38  Aligned_cols=131  Identities=17%  Similarity=0.170  Sum_probs=85.1

Q ss_pred             cCCCCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccC----CCCCcceeEEecCCcEEEEeecCCCCCCC-CCC--C
Q 030972            4 SAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRP----GSFNFDGAWLFGHGIGIHLLQSENPDSLP-KKS--V   76 (168)
Q Consensus         4 ~~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~--~   76 (168)
                      ..|.+-++.+++||.|.|.|.+.++.||+..|||++-...    +........+..+.....+.....+.... +..  .
T Consensus         8 ~k~~~g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~   87 (381)
T KOG0638|consen    8 AKPEAGKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVK   87 (381)
T ss_pred             CCccccceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhh
Confidence            3444556789999999999999999999999999987633    21122222234444444454444443211 111  3


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeC-C-eeEEEEEEECCCCCEEEEEe
Q 030972           77 INPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEG-G-ILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        77 ~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~-g-~~~~~~~~~DPdG~~iel~~  134 (168)
                      ++.+..-+||+|+|++.+.+.+.++|+++..+|.... . ...+.+.+..+.-...-+++
T Consensus        88 HgdgvkdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvE  147 (381)
T KOG0638|consen   88 HGDGVKDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVE  147 (381)
T ss_pred             cccchhceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhh
Confidence            4567889999999999999999999999988875432 1 12344556555433333333

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.79  E-value=7.2e-08  Score=70.89  Aligned_cols=98  Identities=18%  Similarity=0.248  Sum_probs=68.5

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCC-CCCCCCCCCCceEEEEEeC
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS-LPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~hl~~~v~   89 (168)
                      -+.|+||.|.|.|++++.+||+++|||+...+..    ...|+..++..-++........ .........|...+.+.+.
T Consensus       166 ~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~----~A~F~a~G~YHHHia~N~W~s~~~~~~~~~~~GLa~~~i~~~  241 (265)
T COG2514         166 GTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP----SALFLASGDYHHHLAANTWNSRGARPRNANASGLAWLEIHTP  241 (265)
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC----cceEEecCCcceeEEEeccccCCCCCCCCCCCCcceEEEEcC
Confidence            4679999999999999999999999999988733    5678888876666655444332 2222245568888888887


Q ss_pred             CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEE
Q 030972           90 SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC  133 (168)
Q Consensus        90 dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~  133 (168)
                      +-+.+......                     ..||.|+.|.++
T Consensus       242 ~~~~l~~~~~~---------------------~~Dp~G~~i~~~  264 (265)
T COG2514         242 DPEKLDATGTR---------------------LTDPWGIVIRVV  264 (265)
T ss_pred             Ccccccccccc---------------------eecCCCceEEEe
Confidence            63322111110                     178999998875

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.72  E-value=1.4e-06  Score=56.54  Aligned_cols=113  Identities=22%  Similarity=0.161  Sum_probs=63.3

Q ss_pred             eeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHH
Q 030972           15 NHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNHLSFQCESVG   92 (168)
Q Consensus        15 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~   92 (168)
                      .+-+|.|.|-+..++||++.|||+...+..    ..+++.....  .+.|-+.+...+.  .-...-...++.+.|++..
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn----a~a~lg~~~~~erlvlEESP~~rtr--~V~G~KKl~~ivIkv~~~~   75 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN----ALAILGDQQKEERLVLEESPSMRTR--AVEGPKKLNRIVIKVPNPK   75 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET----TEEEEE-TT--EEEEEEE--TTT-B----SSS-SEEEEEEEESSHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc----cEEEecCCCCceEEEEecCCccccc--cccCcceeeEEEEEcCCHH
Confidence            356899999999999999999999998765    4555655433  3444444433211  1122335789999999866


Q ss_pred             HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           93 NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        93 ~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++.+ |.++|.++...-.   |..++.|-..+|+|..|.|...++
T Consensus        76 EIe~-LLar~~~~~~l~k---g~~gyAfe~vSPEgd~~llhaEdd  116 (125)
T PF14506_consen   76 EIEA-LLARGAQYDRLYK---GKNGYAFEAVSPEGDRFLLHAEDD  116 (125)
T ss_dssp             HHHH-HHHC-S--SEEEE----SSSEEEEEE-TT--EEEEE--S-
T ss_pred             HHHH-HHhcccccceeEE---cCCceEEEEECCCCCEEEEEEcCC
Confidence            6544 4445555422212   333367888899999999988654

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.66  E-value=5.3e-07  Score=63.58  Aligned_cols=124  Identities=13%  Similarity=0.206  Sum_probs=64.5

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCcEEEEeecCCCCCCCCCC--------CCCCCceE
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSENPDSLPKKS--------VINPKDNH   83 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--------~~~~~~~h   83 (168)
                      |+|+.+.|+|++++.++|++.|||.+.....  ..+.....+..++..++|+........+...        ....|..+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYG   80 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEE
Confidence            6899999999999999997789999886422  2222333444455599999863322221110        13568889


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCe-eEEEEEEECC----CCCEEEEEeeCC
Q 030972           84 LSFQCESVGNVEKFLKEMGIKYVRALVEEGGI-LVEQLFFHDP----DGFMIEICDCDN  137 (168)
Q Consensus        84 l~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~-~~~~~~~~DP----dG~~iel~~~~~  137 (168)
                      +|+.++|+++..++|++.|+.........++. ....+++.++    .+..-.+++...
T Consensus        81 ~~l~t~d~~~~~~~l~~~G~~~~~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~  139 (175)
T PF13468_consen   81 WALRTDDIEAVAARLRAAGLDAGSRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWET  139 (175)
T ss_dssp             EEEE-S-HHHHHHHHHTTT-EEEEEEEEEE-EEEEEEEEEE-SS---SS---EEEEESS
T ss_pred             EEEecCCHHHHHHHHHhcCCCCCCcCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCC
Confidence            99999999999999999998732222222222 2344566664    256667775544

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.59  E-value=4.4e-07  Score=61.32  Aligned_cols=123  Identities=20%  Similarity=0.269  Sum_probs=80.2

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCC--CCCCCCceEE
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK--SVINPKDNHL   84 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hl   84 (168)
                      +|+.+.++.+|.+.++|.+++..+++ .|||+...+....  ....+..+...+.|-..  +++....  ..++.+..-+
T Consensus         3 nP~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk--~v~l~rQG~I~~vln~e--p~s~a~~~~~~HG~sv~ai   77 (139)
T PF14696_consen    3 NPLGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK--DVTLYRQGDINFVLNSE--PDSFAAEFAAQHGPSVCAI   77 (139)
T ss_dssp             -TT-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC--SEEEEEETTEEEEEEEE--STSCHHHHHHHHSSEEEEE
T ss_pred             CCCCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc--ceEEEEeCCEEEEEeCC--CcchHHHHHHhcCCEEEEE
Confidence            46788999999999999877888886 5999998764321  33444556556555442  2221111  1346788999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           85 SFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        85 ~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +|.|+|.+.+++++.++|.+....+.....  ...--++-++|-++-|++..
T Consensus        78 afrV~Da~~A~~rA~~~GA~~~~~~~~~~e--~~~paI~g~G~sl~yfVdr~  127 (139)
T PF14696_consen   78 AFRVDDAAAAYERAVALGAEPVQEPTGPGE--LNIPAIRGIGGSLHYFVDRY  127 (139)
T ss_dssp             EEEES-HHHHHHHHHHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE--
T ss_pred             EEEeCCHHHHHHHHHHcCCcCcccCCCCCc--EeeeeEEccCCCEEEEEecC
Confidence            999999999999999999998877643322  23466788999999999864

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.56  E-value=2.1e-06  Score=67.60  Aligned_cols=123  Identities=11%  Similarity=0.103  Sum_probs=85.1

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCC----CCcceeEEecCCcEEEEeecCCCC--C----------CC---C-
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGS----FNFDGAWLFGHGIGIHLLQSENPD--S----------LP---K-   73 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~--~----------~~---~-   73 (168)
                      ++||.++|.|.+++..||+..|||+.......    .......+..+...+.+.....+.  .          .+   . 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            58999999999999999999999998764431    112234455555566555553221  0          00   0 


Q ss_pred             --C---CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeC----CeeEEEEEEECCCCCEEEEEeeC
Q 030972           74 --K---SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEG----GILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        74 --~---~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~----g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                        .   ..++.+..-++|.|+|++.+++++.++|++....+....    +......-+.-++|..+-|++..
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~  152 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYK  152 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccC
Confidence              0   034578889999999999999999999999887765421    11234455677888888888754

>PRK10148 hypothetical protein; Provisional

Probab=98.52  E-value=1.3e-05  Score=54.96  Aligned_cols=113  Identities=17%  Similarity=0.011  Sum_probs=69.3

Q ss_pred             EEEEeC-CHHHHHHHHHHccCCeeeccCC--C--------------------CCcceeEEecCCcEEEEeecCCCCCCCC
Q 030972           17 VSLVCR-NISESIDFYQNVLGFVPIRRPG--S--------------------FNFDGAWLFGHGIGIHLLQSENPDSLPK   73 (168)
Q Consensus        17 v~l~v~-D~~~a~~FY~~~LG~~~~~~~~--~--------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~   73 (168)
                      ..|..+ |-++|++||+++||.++.....  +                    ...-.+-+..++..+.+...... .   
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~-~---   80 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPS-G---   80 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCC-c---
Confidence            455664 8999999999999988754310  0                    00112233444444444332111 1   


Q ss_pred             CCCCCCCceEEEEEeCCHHH---HHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           74 KSVINPKDNHLSFQCESVGN---VEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        74 ~~~~~~~~~hl~~~v~dl~~---~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                        .......++++.++|.++   +++.| +.|.++..++.... ++.+...+.||.|+.|.|...+.
T Consensus        81 --~~~~~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~-wg~~~g~v~D~fGi~W~l~~~~~  143 (147)
T PRK10148         81 --KAHYSGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETF-WAHGFGKVTDKFGVPWMINVVKQ  143 (147)
T ss_pred             --CCCCCeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcc-hhhccEEEECCCCCEEEEEecCC
Confidence              111135678888888776   55655 47888876655433 33456899999999999998654

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.40  E-value=3.5e-07  Score=69.59  Aligned_cols=103  Identities=17%  Similarity=0.244  Sum_probs=70.8

Q ss_pred             CCccceeeeEEEEe--CCHHHHHHHHHHccCCeeeccCC-CCCccee----EE-ecCCcEEEEeecCCCCCCCCC---CC
Q 030972            8 PLHLKSVNHVSLVC--RNISESIDFYQNVLGFVPIRRPG-SFNFDGA----WL-FGHGIGIHLLQSENPDSLPKK---SV   76 (168)
Q Consensus         8 ~~~~~~l~hv~l~v--~D~~~a~~FY~~~LG~~~~~~~~-~~~~~~~----~~-~~~~~~~~l~~~~~~~~~~~~---~~   76 (168)
                      ...+..|+|+++.|  ..++.+..||+++|||+.....+ ......+    .. .++..++-|-...+..+....   ..
T Consensus       162 ~~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y  241 (363)
T COG3185         162 GVGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREY  241 (363)
T ss_pred             ccCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHh
Confidence            34567899998876  69999999999999999877433 1111111    11 123345555444443321111   13


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeee
Q 030972           77 INPKDNHLSFQCESVGNVEKFLKEMGIKYVRALV  110 (168)
Q Consensus        77 ~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~  110 (168)
                      .+.|++||+|.++|+-++.++|++.|+++...|.
T Consensus       242 ~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         242 RGEGIQHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             CCCcceEEEecccHHHHHHHHHHHcCCccCCCch
Confidence            5679999999999999999999999999987653

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.60  E-value=0.0017  Score=49.98  Aligned_cols=116  Identities=19%  Similarity=0.315  Sum_probs=74.8

Q ss_pred             CCCCccceeeeEEEEeCCH-HHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCC--CCCCCCce
Q 030972            6 GNPLHLKSVNHVSLVCRNI-SESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK--SVINPKDN   82 (168)
Q Consensus         6 ~~~~~~~~l~hv~l~v~D~-~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~   82 (168)
                      +.|+...++.+|.|.|+|. ++...++.. |||....+...   ..+.+...+ .+.++....+.+-...  ..++++..
T Consensus        15 ~~P~~~~GfeFvEf~~~d~~~~l~~l~~~-lGF~~~~~Hrs---k~v~l~rQG-dinlvvn~~~~s~a~~f~~~Hgps~~   89 (363)
T COG3185          15 ANPEGTDGFEFVEFAVPDPQEALGALLGQ-LGFTAVAKHRS---KAVTLYRQG-DINLVVNAEPDSFAAEFLDKHGPSAC   89 (363)
T ss_pred             cCCCCCCceeEEEEecCCHHHHHHHHHHH-hCccccccccc---cceeEEEeC-CEEEEEcCCCcchhhHHHHhcCCchh
Confidence            4556688999999999999 555556665 99998775432   123332222 3444444444331111  14567889


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEEeeeeee--------CCeeEEEEEEECCC
Q 030972           83 HLSFQCESVGNVEKFLKEMGIKYVRALVEE--------GGILVEQLFFHDPD  126 (168)
Q Consensus        83 hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~--------~g~~~~~~~~~DPd  126 (168)
                      .++|.|+|.+.++++.+++|.+....+...        .|.+...+||.|..
T Consensus        90 a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~  141 (363)
T COG3185          90 AMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRY  141 (363)
T ss_pred             eeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccC
Confidence            999999999999999999999655543310        12234557777777

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.46  E-value=0.00022  Score=53.95  Aligned_cols=132  Identities=14%  Similarity=0.129  Sum_probs=84.0

Q ss_pred             CccceeeeEEEEeC--CHHHHHHHHHHccCCeeeccCCCCCcce-------eEEecCCcEEEEeecCCCCCCCC------
Q 030972            9 LHLKSVNHVSLVCR--NISESIDFYQNVLGFVPIRRPGSFNFDG-------AWLFGHGIGIHLLQSENPDSLPK------   73 (168)
Q Consensus         9 ~~~~~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~------   73 (168)
                      +.+.+++|++..++  .++.+.+||.+.|||..-+..++.....       +.+......+.+-..........      
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQIqe  253 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQIQE  253 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHHHHH
Confidence            66789999999999  7899999999999998776544222111       11111122222222111111111      


Q ss_pred             --CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCe--------------------eEEEEEEECCCCCEEE
Q 030972           74 --KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGI--------------------LVEQLFFHDPDGFMIE  131 (168)
Q Consensus        74 --~~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~--------------------~~~~~~~~DPdG~~ie  131 (168)
                        .+..++|.+|+++.++|+-.+.+.++++|.++...|......                    .-....-.|..|+++.
T Consensus       254 yv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De~gyLLQ  333 (381)
T KOG0638|consen  254 YVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDENGYLLQ  333 (381)
T ss_pred             HHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcEEee
Confidence              125678999999999999999999999999998765321100                    0011333578899999


Q ss_pred             EEeeCCCCC
Q 030972          132 ICDCDNLPV  140 (168)
Q Consensus       132 l~~~~~~~~  140 (168)
                      |......++
T Consensus       334 IFTKplqdr  342 (381)
T KOG0638|consen  334 IFTKPLQDR  342 (381)
T ss_pred             eeccccCCC
Confidence            998654333

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.30  E-value=0.0079  Score=39.50  Aligned_cols=99  Identities=18%  Similarity=0.096  Sum_probs=56.3

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeec---cCCCC------CcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIR---RPGSF------NFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~---~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      |+.|. .+-++|.+||.++||-....   ..+..      ....+-+..++..+........       ...+....|++
T Consensus         6 yL~F~-g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~~~-------~~~~~~~sl~i   77 (116)
T PF06983_consen    6 YLWFN-GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGGPD-------FPFGNNISLCI   77 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEESTS-----------TTEEEEE
T ss_pred             EEEeC-CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCCCC-------CCCCCcEEEEE
Confidence            44443 78999999999999943322   11100      1112334455666655554411       11234588888


Q ss_pred             EeCCHH---HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEE
Q 030972           87 QCESVG---NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC  133 (168)
Q Consensus        87 ~v~dl~---~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~  133 (168)
                      .++|.+   +++++|.+.|-         +. . ....+.|..|..|.|+
T Consensus        78 ~~~~~ee~~~~f~~Ls~gG~---------~~-~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   78 ECDDEEEIDRIFDKLSEGGQ---------WF-S-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             EESSHHHHHHHHHHHHTTTE---------TC-C-EEEEEE-TTS-EEEEE
T ss_pred             EcCCHHHHHHHHHHHHcCCC---------cc-c-eeEEEEeCCCCEEEeC
Confidence            888654   55677776665         21 2 4588999999999985

>PF15067 FAM124: FAM124 family

Probab=97.07  E-value=0.014  Score=42.47  Aligned_cols=103  Identities=20%  Similarity=0.303  Sum_probs=61.0

Q ss_pred             eeeeEEEEeC--CHHHHHHHHHHccCCeeeccCCCCCcceeEEecC--CcEEEEeecCCCCCCCCCCCCCCCceEEEEEe
Q 030972           13 SVNHVSLVCR--NISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH--GIGIHLLQSENPDSLPKKSVINPKDNHLSFQC   88 (168)
Q Consensus        13 ~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v   88 (168)
                      .+-.++++|+  |.+.+++||+-+|+-++.....+.   -.|....  +..+.+.-..-+....   .......-+.|.|
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~~F---C~F~lys~~~~~iQlsLK~lp~~~~---p~p~esavLqF~V  201 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKEDF---CFFTLYSQPGLDIQLSLKQLPPGMS---PEPTESAVLQFRV  201 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeCCc---EEEEEecCCCeEEEEEeccCCCCCC---cccccceEEEEEe
Confidence            4456788888  999999999999999987665422   2222222  3334443322221111   1122457899999


Q ss_pred             CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEE
Q 030972           89 ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIE  131 (168)
Q Consensus        89 ~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~ie  131 (168)
                      .|+-++.-.|=.-=.++        +.+.  .-.+|||||.|=
T Consensus       202 ~~igqLvpLLPnpc~PI--------S~~r--WqT~D~DGNkIL  234 (236)
T PF15067_consen  202 EDIGQLVPLLPNPCSPI--------SETR--WQTEDYDGNKIL  234 (236)
T ss_pred             cchhhhcccCCCCcccc--------cCCc--ceeeCCCCCEec
Confidence            99888765432211111        1112  557899999973

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=96.70  E-value=0.011  Score=38.09  Aligned_cols=55  Identities=18%  Similarity=0.233  Sum_probs=41.7

Q ss_pred             eEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCC-CEEEEEeeCC
Q 030972           82 NHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDG-FMIEICDCDN  137 (168)
Q Consensus        82 ~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG-~~iel~~~~~  137 (168)
                      .|++|.|+|++++.+.+.+ .|+......... +......++..++| ..|||+++..
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~-~~~v~~~~~~~~~~~~~iELi~p~~   57 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDE-PQGVRVAFLYLGDGPVQIELIQPLD   57 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEG-CTTEEEEEEEETTETEEEEEEEESS
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecC-CCCEEEEEEEeCCCcEEEEEEEeCC
Confidence            5999999999999999998 798865443322 23445678888888 6899999765

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.11  E-value=0.022  Score=36.24  Aligned_cols=91  Identities=18%  Similarity=0.262  Sum_probs=41.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC---
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE---   89 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~---   89 (168)
                      .+..+.|.|+| +++.+||+++||-..                 ...+.+.+..+++-... +...-+.-.+-|.|+   
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~-----------------~~~l~f~ea~G~DL~~~-~~~twDLe~Lkf~V~~~~   65 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQL-----------------PFFLTFQEAQGPDLTIE-NNETWDLEMLKFQVPKDF   65 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHH-----------------TTTEEEEE---CCGSS--TTSBSSEEEEEEEES-S-
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCC-----------------CceEEEeeccCCccccC-CCcEEeeEEEEEEecCcc
Confidence            35678999999 889999999887221                 12344444443321111 122346678888887   


Q ss_pred             CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEE
Q 030972           90 SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMI  130 (168)
Q Consensus        90 dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~i  130 (168)
                      |+.++.+++.+.++ ++ +.      ....+-+.||.|+.|
T Consensus        66 Dl~~L~~~le~~~~-fi-dK------k~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   66 DLAALKSHLEEQEF-FI-DK------KEKFLVTSDPSQIEL   98 (101)
T ss_dssp             -HHHHHHHTTTS-E-E---T------T-SEEEEE-TTS-EE
T ss_pred             cHHHHHHHhcccce-Ee-cC------CceEEEEECCcceEE
Confidence            78888888887332 21 11      113477889998765

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=95.34  E-value=0.035  Score=38.98  Aligned_cols=53  Identities=19%  Similarity=0.302  Sum_probs=31.6

Q ss_pred             ceEEEEEeCCHHHHHHHH-HHcCCeEEeeeeeeC-CeeEEEEEEECCCCCEEEEEeeC
Q 030972           81 DNHLSFQCESVGNVEKFL-KEMGIKYVRALVEEG-GILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        81 ~~hl~~~v~dl~~~~~~l-~~~g~~~~~~~~~~~-g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +.|+.+.|+|++++.+++ +..|+.+..+..... |.....++|  ++| .|||+..+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f--~~~-YlEli~i~   55 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPF--GDG-YLELIAID   55 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE---SSS-EEEEEEES
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEee--CCc-eEEEEEeC
Confidence            369999999999999999 778999987766554 555555555  667 99999964

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=95.26  E-value=0.12  Score=35.61  Aligned_cols=52  Identities=13%  Similarity=0.176  Sum_probs=37.6

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCc-ceeEEe-cCCcEEEEee
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNF-DGAWLF-GHGIGIHLLQ   64 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~-~~~~~~-~~~~~~~l~~   64 (168)
                      ++++||+|.|+|+.++..-+++ +|.+...+..+... ..+|+. .++.++++..
T Consensus       114 rGfgHIci~V~di~sac~~lke-kGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~  167 (170)
T KOG2944|consen  114 RGFGHICIEVDDINSACERLKE-KGVRFKKKLKDGKMKPIAFLHDPDGYWIEIEL  167 (170)
T ss_pred             CccceEEEEeCCHHHHHHHHHH-hCceeeecCCCccccceeEEECCCCCeEEEee
Confidence            5799999999999999999998 99997776554444 333433 3344666543

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.45  E-value=0.42  Score=31.81  Aligned_cols=58  Identities=19%  Similarity=0.359  Sum_probs=40.1

Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeEEeeeeee----------CCeeEEEEEEECCCC-CEEEEEeeCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKEMGIKYVRALVEE----------GGILVEQLFFHDPDG-FMIEICDCDN  137 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~----------~g~~~~~~~~~DPdG-~~iel~~~~~  137 (168)
                      ++.|+++.|.|+++..+..++.|.++.......          .+......++..|+| ..+||++...
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~   71 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHH   71 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecC
Confidence            578999999999999999888898775432111          111234456666665 5799998654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=94.38  E-value=0.45  Score=30.55  Aligned_cols=58  Identities=17%  Similarity=0.367  Sum_probs=40.1

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECC---CCCEEEEEeeCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDP---DGFMIEICDCDN  137 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DP---dG~~iel~~~~~  137 (168)
                      ++.|+++.|+|+++..+..++ .|.+.........+...+.+++.+.   .|..++|.....
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   62 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPD   62 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCC
Confidence            468999999999999999987 5998765432222112234666554   677899987644

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.86  E-value=1  Score=28.76  Aligned_cols=57  Identities=19%  Similarity=0.322  Sum_probs=39.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++.|+++.|.|++++.+..++ .|+.+........+ ..+.+.+..+++..+++.....
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~i~l~~~~~   60 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPER-GSYKLDLLLNGGYQLELFSFPN   60 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCC-CcEEEEEecCCCcEEEEEEcCC
Confidence            679999999999999999986 69988654322221 1223445556778888876543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN02367 lactoylglutathione lyase

Probab=93.55  E-value=0.44  Score=35.20  Aligned_cols=56  Identities=13%  Similarity=0.325  Sum_probs=39.9

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCc-ceeEE-ecCCcEEEEeecCCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNF-DGAWL-FGHGIGIHLLQSENP   68 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~~~~~   68 (168)
                      .+++|++|.|+|++++.+-.++ .|.++......... ..+|+ ..+|..++|++...-
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeCCccCCceEEEEEECCCCCEEEEEecccc
Confidence            4799999999999999999997 99998764432221 12333 345678888876543

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=92.76  E-value=0.72  Score=28.14  Aligned_cols=45  Identities=18%  Similarity=0.198  Sum_probs=35.4

Q ss_pred             CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           90 SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        90 dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +.+++.+.+++.|+.+..-.....|  .|.+...|.+|+.+|+.-..
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g--~yev~~~~~dG~~~ev~vD~   74 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDG--CYEVEARDKDGKKVEVYVDP   74 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCC--EEEEEEEECCCCEEEEEEcC
Confidence            7899999999999977655443333  36799999999999998653

This is family M4 in the peptidase classification.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=92.51  E-value=1.5  Score=30.25  Aligned_cols=58  Identities=17%  Similarity=0.244  Sum_probs=40.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-cCCeEEeeee---ee------------C--CeeEEEEEEECCCCCEEEEEeeCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKE-MGIKYVRALV---EE------------G--GILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~---~~------------~--g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++.|+++.|.|+++..+..++ .|.++...+.   ..            .  +.....+++..++|..|||.+...
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~   79 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKN   79 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccC
Confidence            679999999999999999977 5987753210   00            0  012344666667788899999865

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=91.86  E-value=0.97  Score=29.08  Aligned_cols=31  Identities=10%  Similarity=0.290  Sum_probs=26.5

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRP   43 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~   43 (168)
                      .++.|++|.|+|++++.+..++ .|.++....
T Consensus        71 ~g~~h~~f~v~d~~~~~~~l~~-~G~~~~~~~  101 (128)
T cd07249          71 EGLHHIAFEVDDIDAALARLKA-QGVRLLQEG  101 (128)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeeeccC
Confidence            5678999999999999999987 788876643

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=91.82  E-value=1.2  Score=31.76  Aligned_cols=56  Identities=13%  Similarity=0.293  Sum_probs=39.0

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCC-cceeEE-ecCCcEEEEeecCCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFN-FDGAWL-FGHGIGIHLLQSENP   68 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~~~-~~~~~~~~l~~~~~~   68 (168)
                      .+++|++|.|.|++++.+.+++ .|.++........ ....|+ ..++..++|++..+-
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~~~  177 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEK-LGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLKRI  177 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHH-CCCeEEeCCccCCceeEEEEECCCCCEEEEEECCCc
Confidence            3789999999999999999998 9998775432111 122332 345667888876554

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=91.75  E-value=2.3  Score=27.09  Aligned_cols=57  Identities=14%  Similarity=0.211  Sum_probs=39.3

Q ss_pred             CceEEEEEeCCHHHHHHHHHHc-CCeEEeeeeee-CCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKEM-GIKYVRALVEE-GGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~~-g~~~~~~~~~~-~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++.|+++.|.|+++..+...+. |.++....... .+......++...+ ..+++.....
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~   59 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE-GHIELFLNPS   59 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS-SCEEEEEEES
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc-cceeeeeecc
Confidence            4689999999999999999985 99988765522 22233334444444 4577777654

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>PRK10291 glyoxalase I; Provisional

Probab=91.21  E-value=1.7  Score=28.38  Aligned_cols=55  Identities=20%  Similarity=0.199  Sum_probs=37.5

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC--CC-cceeE-EecCCcEEEEeecCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS--FN-FDGAW-LFGHGIGIHLLQSEN   67 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~-~~~~~-~~~~~~~~~l~~~~~   67 (168)
                      ..++|++|.|+|++++.+-.++ .|.++......  .. ...+| ...++..++|++...
T Consensus        64 ~~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         64 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            3688999999999999999987 88877643211  11 11233 345567888888664

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=90.37  E-value=1.5  Score=28.92  Aligned_cols=53  Identities=13%  Similarity=0.100  Sum_probs=34.1

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHc--cCCeeeccCCCCCcc----eeEEecCCcEEEEee
Q 030972           12 KSVNHVSLVCRNISESIDFYQNV--LGFVPIRRPGSFNFD----GAWLFGHGIGIHLLQ   64 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~--LG~~~~~~~~~~~~~----~~~~~~~~~~~~l~~   64 (168)
                      .+++|+++.|.|++...+++..+  .|+++..........    ..+...++..+++..
T Consensus        61 ~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~  119 (134)
T cd08360          61 AGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGA  119 (134)
T ss_pred             CcceEEEEEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEc
Confidence            57899999999999999877776  677655332211111    123344556777764

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.52  E-value=2.9  Score=26.98  Aligned_cols=52  Identities=15%  Similarity=0.295  Sum_probs=36.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHHc----CCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKEM----GIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~~----g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++.|+.+.|.|++++.+...+.    |.+.....  ..+    ..|+...++..++|....+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~--~~~----~~~~~~~~~~~i~l~~~~~   56 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEW--EDG----RSWRAGDGGTYLVLQQADG   56 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEee--ccC----ceEEecCCceEEEEEeccc
Confidence            4689999999999999988886    88876543  111    1333335667888887654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=88.79  E-value=3.1  Score=26.88  Aligned_cols=29  Identities=7%  Similarity=0.150  Sum_probs=24.8

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeec
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIR   41 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~   41 (168)
                      .++.|++|.|+|++++.+-..+ .|.+...
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~  102 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEA  102 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeec
Confidence            4578999999999999998887 8988654

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=88.42  E-value=2.3  Score=27.36  Aligned_cols=30  Identities=13%  Similarity=0.357  Sum_probs=25.1

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeecc
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRR   42 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~   42 (168)
                      .++.|++|.|.|++++.+..++ .|.++...
T Consensus        71 ~g~~~i~~~v~di~~~~~~l~~-~G~~~~~~  100 (128)
T TIGR03081        71 GGIHHIAIEVDDIEAALETLKE-KGVRLIDE  100 (128)
T ss_pred             CceEEEEEEcCCHHHHHHHHHH-CCCcccCC
Confidence            4677999999999999999887 78887653

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.00  E-value=6.5  Score=26.79  Aligned_cols=98  Identities=15%  Similarity=0.100  Sum_probs=55.1

Q ss_pred             eCCHHHHHHHHHHccCCeeec------cCCCCC----cceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC-
Q 030972           21 CRNISESIDFYQNVLGFVPIR------RPGSFN----FDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE-   89 (168)
Q Consensus        21 v~D~~~a~~FY~~~LG~~~~~------~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-   89 (168)
                      -.+.++|..||.++|-=..+.      .....+    ...+-+..++..+..+.......-     .-+.-..+-+.++ 
T Consensus        13 ~~~AeeA~~fY~s~FpdS~i~~i~r~p~~~~~g~~G~Vl~a~F~l~g~~f~~ld~g~~~~f-----~fneA~S~~v~~~~   87 (151)
T COG3865          13 DGNAEEAMNFYLSTFPDSKIIGITRYPEGEPGGKEGKVLVAEFTLNGQSFMALDGGPNTSF-----KFNEAFSFQVACDD   87 (151)
T ss_pred             CCcHHHHHHHHHHhCCcceeeeeeecCCCCCCCCCccEEEEEEEECCeEEEEEcCCCCcCC-----CcCccEEEEEEcCC
Confidence            389999999999987533322      111111    112223444544444333222111     1112244555555 


Q ss_pred             --CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           90 --SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        90 --dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                        .+|++...|...|.+.           ..+.+++|..|.-|.|+=
T Consensus        88 q~E~Drlwnal~~~g~e~-----------~~cgW~kDKfGVSWQi~p  123 (151)
T COG3865          88 QEEIDRLWNALSDNGGEA-----------EACGWLKDKFGVSWQIVP  123 (151)
T ss_pred             HHHHHHHHHHHhccCcch-----------hcceeEecccCcEEEEcH
Confidence              4677788888777621           144789999999999984

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=87.78  E-value=4.4  Score=26.78  Aligned_cols=56  Identities=13%  Similarity=0.027  Sum_probs=39.0

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC--CCcceeEE-ecCCcEEEEeecCCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS--FNFDGAWL-FGHGIGIHLLQSENP   68 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~-~~~~~~~~l~~~~~~   68 (168)
                      .++.|++|.|+|++++.+-.++ .|.++......  .....+++ ..++..++|++....
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccCCcEEEEEecCCC
Confidence            4678999999999999999997 89998765443  11222333 244567888775544

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.64  E-value=6.2  Score=25.05  Aligned_cols=54  Identities=17%  Similarity=0.260  Sum_probs=36.0

Q ss_pred             ceEEEEEeCCHHHHHHHHHHc-CCeEEeeeee-eCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           81 DNHLSFQCESVGNVEKFLKEM-GIKYVRALVE-EGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        81 ~~hl~~~v~dl~~~~~~l~~~-g~~~~~~~~~-~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +.|+++.|+|+++..+...+. |.+....-.. ..+.  ...|+.-.+|..++|++..
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~   57 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGF--ESYFLSFDDGARLELMTRP   57 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCc--eEEEEecCCCcEEEEEcCc
Confidence            579999999999999988884 8876432111 1121  2234443467889998754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=86.56  E-value=6.2  Score=24.97  Aligned_cols=55  Identities=18%  Similarity=0.215  Sum_probs=37.3

Q ss_pred             ceEEEEEeCCHHHHHHHHHHc-CCeEEeeeeeeCCeeEEEEEEECCC---CCEEEEEeeC
Q 030972           81 DNHLSFQCESVGNVEKFLKEM-GIKYVRALVEEGGILVEQLFFHDPD---GFMIEICDCD  136 (168)
Q Consensus        81 ~~hl~~~v~dl~~~~~~l~~~-g~~~~~~~~~~~g~~~~~~~~~DPd---G~~iel~~~~  136 (168)
                      +.|+++.|.|++++.+...+. |++.........+ ....+++..++   +..+++....
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~l~~~~   59 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEG-KFTLVFLGYPDEDSEGVLELTYNW   59 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCC-ceEEEEecCCCCCCccEEEEEecC
Confidence            479999999999999999875 9987654322221 12224555444   5788887643

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.17  E-value=6.1  Score=24.68  Aligned_cols=52  Identities=13%  Similarity=0.208  Sum_probs=35.2

Q ss_pred             EEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCC--CEEEEEeeC
Q 030972           83 HLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDG--FMIEICDCD  136 (168)
Q Consensus        83 hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG--~~iel~~~~  136 (168)
                      |+++.|.|+++..+...+ .|.++........+  ...+.+.++++  ..++|....
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~   55 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGG--FRWVTVAPPGSPETSLVLAPPA   55 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCC--cEEEEEeCCCCCeeEEEEeCCC
Confidence            789999999999999988 69988654321122  23355666654  467766544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.10  E-value=3.3  Score=25.56  Aligned_cols=53  Identities=11%  Similarity=0.190  Sum_probs=35.9

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           81 DNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        81 ~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +.|+++.|+|++++.+...+ .|......+...  .  ...++...++..++|.....
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--~--~~~~~~~~~~~~i~l~~~~~   54 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL--F--PGAWLYAGDGPQLHLIEEDP   54 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC--C--CceEEEeCCCcEEEEEecCC
Confidence            47999999999999998874 588775443211  1  12455555556788887644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=85.86  E-value=5.8  Score=24.04  Aligned_cols=51  Identities=20%  Similarity=0.328  Sum_probs=37.2

Q ss_pred             EEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           83 HLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        83 hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |+.+.+.|+++..+...+ .|.+....... ..  ...+++.+. +..++|.....
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~-~~--~~~~~~~~~-~~~i~l~~~~~   52 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN-GG--AEFAVLGLG-GTRLELFEGDE   52 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc-CC--EEEEEEecC-CceEEEecCCC
Confidence            788999999999999998 79987665421 11  233556554 78999998754

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>PRK11700 hypothetical protein; Provisional

Probab=85.84  E-value=11  Score=26.97  Aligned_cols=75  Identities=11%  Similarity=0.062  Sum_probs=46.8

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC-CcceeEE------ecCCcEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF-NFDGAWL------FGHGIGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      -.++||.++|.+.+.|.+|-+.++..-..-..... +...+.+      ..++.++..++-+-+....   ....|.-|+
T Consensus        38 ~~~DHialR~n~~~tAe~w~~~l~~~G~llSen~INGRPI~l~~L~qPl~~~~w~I~cvELP~P~~k~---Yp~eGWEHI  114 (187)
T PRK11700         38 LEADHIALRCNQNETAERWRQGFLQCGELLSENIINGRPICLFELDQPLQVGHWSIDCVELPYPGEKR---YPHEGWEHI  114 (187)
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCcEEEEEEeCCCCCCC---CCCCCceEE
Confidence            45799999999999999999887655432211111 1112222      2345677777766654322   224588999


Q ss_pred             EEEeC
Q 030972           85 SFQCE   89 (168)
Q Consensus        85 ~~~v~   89 (168)
                      -+-++
T Consensus       115 ElVlp  119 (187)
T PRK11700        115 ELVLP  119 (187)
T ss_pred             EEEec
Confidence            99887

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=85.66  E-value=7.4  Score=27.73  Aligned_cols=75  Identities=15%  Similarity=0.105  Sum_probs=41.3

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeE-------EecCCcEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAW-------LFGHGIGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      -.++||+++|.+.+.+.+|-+.++..-..-.......+.+.       +..++..+.+++-+-+....   ....|.-|+
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~K~---Yp~eGWEHI  109 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGGWSIDCVELPYPKDKR---YPQEGWEHI  109 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEE---SS-----SS-EEEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCCeeEEEEEeCCCCCCC---CCCCCceEE
Confidence            46899999999999999999998766533211101111111       13456677777766654321   123578899


Q ss_pred             EEEeC
Q 030972           85 SFQCE   89 (168)
Q Consensus        85 ~~~v~   89 (168)
                      .|-++
T Consensus       110 E~Vip  114 (185)
T PF06185_consen  110 EFVIP  114 (185)
T ss_dssp             EEE--
T ss_pred             EEEec
Confidence            99887

; PDB: 1K4N_A.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=85.42  E-value=5.4  Score=27.34  Aligned_cols=54  Identities=17%  Similarity=0.238  Sum_probs=31.5

Q ss_pred             ceeeeEEEEeCC---HHHHHHHHHHccCCeeeccCCCCCcceeEEe-cCCcEEEEeecC
Q 030972           12 KSVNHVSLVCRN---ISESIDFYQNVLGFVPIRRPGSFNFDGAWLF-GHGIGIHLLQSE   66 (168)
Q Consensus        12 ~~l~hv~l~v~D---~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~   66 (168)
                      .+++|++|.|+|   ++++.+...+ .|+.............+|+. .+|..+++....
T Consensus        64 ~~l~Hiaf~v~d~~dvd~~~~~L~~-~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          64 GTVHHVAFRVPDDEELEAWKERLEA-LGLPVSGIVDRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CceEEEEEECCCHHHHHHHHHHHHH-CCCCcccccccccEEEEEEECCCCcEEEEEECC
Confidence            468899999999   5555555554 57764332221112233443 445677777654

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=84.96  E-value=4.9  Score=27.33  Aligned_cols=54  Identities=9%  Similarity=0.028  Sum_probs=32.3

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHc--cCCeeeccCCCC--C-cceeEE-ecCCcEEEEeec
Q 030972           12 KSVNHVSLVCRNISESIDFYQNV--LGFVPIRRPGSF--N-FDGAWL-FGHGIGIHLLQS   65 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~--LG~~~~~~~~~~--~-~~~~~~-~~~~~~~~l~~~   65 (168)
                      .+++|++|.|.|++++.+.+..+  .|+++....+..  + ...+|+ ..++..+++...
T Consensus        66 ~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~  125 (153)
T cd07257          66 SGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTD  125 (153)
T ss_pred             CceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcC
Confidence            57899999999999998444432  777765432211  1 111222 445667777643

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=84.83  E-value=5.6  Score=26.78  Aligned_cols=54  Identities=20%  Similarity=0.261  Sum_probs=36.2

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCC-cceeE-EecCCcEEEEeecC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFN-FDGAW-LFGHGIGIHLLQSE   66 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~-~~~~~-~~~~~~~~~l~~~~   66 (168)
                      .++.|++|.|.|++++.+...+ .|.++.....  ... ....| ...++..+++++..
T Consensus        85 ~g~~hi~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        85 NGFGHIAIGVDDVYKACERVRA-LGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             CceeEEEEecCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            3678999999999999999988 8887765432  111 11223 34456677777644

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=81.64  E-value=14  Score=25.28  Aligned_cols=73  Identities=11%  Similarity=0.097  Sum_probs=45.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC-CcceeEE------ecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF-NFDGAWL------FGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      ++||.++|.+.+.+.+|-+.++..-..-..... +...+.+      ..++.++..++-+-+....   ....|.-|+-+
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~qPl~~~~~~I~cvELP~P~~k~---Yp~eGWEHIE~   78 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSENEINGRPIALIKLEKPLQFAGWSISIVELPFPKDKK---YPQEGWEHIEI   78 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCcEEEEEEeCCCCCCC---CCCCCceEEEE
Confidence            689999999999999999987665432221111 1112222      2345677777766653321   22458889999


Q ss_pred             EeC
Q 030972           87 QCE   89 (168)
Q Consensus        87 ~v~   89 (168)
                      -++
T Consensus        79 Vlp   81 (149)
T cd07268          79 VIP   81 (149)
T ss_pred             Eec
Confidence            886

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd04895 ACT_ACR_1 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein)

Probab=81.02  E-value=8.6  Score=22.88  Aligned_cols=40  Identities=13%  Similarity=0.272  Sum_probs=31.0

Q ss_pred             HHHHHHHHHHcCCeEEeeeeeeCC-eeEEEEEEECCCCCEE
Q 030972           91 VGNVEKFLKEMGIKYVRALVEEGG-ILVEQLFFHDPDGFMI  130 (168)
Q Consensus        91 l~~~~~~l~~~g~~~~~~~~~~~g-~~~~~~~~~DPdG~~i  130 (168)
                      +.++.+-|.+.|+.+........| ...-.||+.|.+|+.+
T Consensus        15 L~~i~~~l~~~gl~I~~AkIsT~Gerv~DvFyV~d~~g~kl   55 (72)
T cd04895          15 LLEAVQVLTDLDLCITKAYISSDGGWFMDVFHVTDQLGNKL   55 (72)
T ss_pred             HHHHHHHHHHCCcEEEEEEEeecCCeEEEEEEEECCCCCCC
Confidence            567788899999999877665544 3456699999999876

This CD includes the N-terminal ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). ACR proteins, found only in Arabidopsis and Oryza, as yet, are proposed to function as novel regulatory or sensor proteins in plants. Nine ACR gene products have been described (ACR1-8 in Arabidopsis and OsARC1-9 in Oryza) and are represented in this CD. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=80.93  E-value=9.2  Score=25.64  Aligned_cols=53  Identities=8%  Similarity=-0.024  Sum_probs=31.6

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHc--cCCeeeccCCC---CCcceeE-EecCCcEEEEee
Q 030972           12 KSVNHVSLVCRNISESIDFYQNV--LGFVPIRRPGS---FNFDGAW-LFGHGIGIHLLQ   64 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~--LG~~~~~~~~~---~~~~~~~-~~~~~~~~~l~~   64 (168)
                      .+++|++|.|.|+++..+.++.+  .|.++......   .....+| ...++..++|+.
T Consensus        66 ~~~~Hiaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          66 GKLHHFSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             CCceEEEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence            46889999999999865544442  67776532211   1112233 345566788765

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=80.78  E-value=11  Score=26.83  Aligned_cols=57  Identities=14%  Similarity=0.208  Sum_probs=40.5

Q ss_pred             CceEEEEEeC--CHHHHHHHHHH-cCCeEEeeeeeeC-CeeEEEEEEECCCC-CEEEEEeeC
Q 030972           80 KDNHLSFQCE--SVGNVEKFLKE-MGIKYVRALVEEG-GILVEQLFFHDPDG-FMIEICDCD  136 (168)
Q Consensus        80 ~~~hl~~~v~--dl~~~~~~l~~-~g~~~~~~~~~~~-g~~~~~~~~~DPdG-~~iel~~~~  136 (168)
                      ++.|+++.|+  |++++.+..++ .|.+......... ....++..+..|+| ..++|.++.
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~   64 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPA   64 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCC
Confidence            5789999999  99999999876 6998755432211 12345677788764 568888754

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	168
3l7t_A	134	Crystal Structure Of Smu.1112c Length = 134		6e-06
3hnq_A	144	Crystal Structure Of Virulence Protein Stm3117 From		2e-05
3huh_A	152	The Structure Of Biphenyl-2,3-Diol 1,2-Dioxygenase		2e-05
3ghj_A	141	Crystal Structure From The Mobile Metagenome Of Hal		6e-04

>pdb|3L7T|A Chain A, Crystal Structure Of Smu.1112c Length = 134

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 9   LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIR---RPGSFNFDGAWLFGHGIGIHLLQS 65
           + LK+V+HV+L+  +  +S +FY N LGF  IR   RP   ++      G  I + +  +
Sbjct: 1   MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG-DIELEIFGN 59
Query: 66  ENPDS---LPKKSVINPKD----NHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVE 118
           +  DS    P + +  P++     HL+F  E V    + L  +GI+ V  +  +     +
Sbjct: 60  KLTDSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIR-VEEVRYDDYTGKK 118
Query: 119 QLFFHDPDGFMIEI 132
             FF DPDG  +E+
Sbjct: 119 MAFFFDPDGLPLEL 132

>pdb|3HNQ|A Chain A, Crystal Structure Of Virulence Protein Stm3117 From Salmonella Typhimurium. Northeast Structural Genomics Consortium Target Id Str274 Length = 144

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           +  ++H+ L   +IS +I FY+ VLGF  +    +F  +   L      I+L Q E  + 
Sbjct: 21  IDRIDHLVLTVSDISTTIRFYEEVLGFSAV----TFKQNRKALIFGAQKINLHQQEX-EF 75
Query: 71  LPKKSVINPKDNHLSFQCES-VGNVEKFLKEMGIKYVRALVEEGGIL--VEQLFFHDPDG 127
            PK S   P    L F   + + +V   + + GI  V   VE  G    +  ++  DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIXSIYIRDPDG 135
Query: 128 FMIEIC 133
            +IEI 
Sbjct: 136 NLIEIS 141

>pdb|3HUH|A Chain A, The Structure Of Biphenyl-2,3-Diol 1,2-Dioxygenase Iii-Related Protein From Salmonella Typhimurium Length = 152

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           +  ++H+ L   +IS +I FY+ VLGF  +    +F  +   L      I+L Q E  + 
Sbjct: 21  IDRIDHLVLTVSDISTTIRFYEEVLGFSAV----TFKQNRKALIFGAQKINLHQQEM-EF 75
Query: 71  LPKKSVINPKDNHLSFQCES-VGNVEKFLKEMGIKYVRALVEEGGILVE--QLFFHDPDG 127
            PK S   P    L F   + + +V   + + GI  V   VE  G   E   ++  DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135
Query: 128 FMIEIC 133
            +IEI 
Sbjct: 136 NLIEIS 141

>pdb|3GHJ|A Chain A, Crystal Structure From The Mobile Metagenome Of Halifax Harbour Sewage Outfall: Integron Cassette Protein Hfx_cass4 Length = 141

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 6   GNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQS 65
           G P ++K +  V++  +N+ +S  FY  +LGF       +  ++  W+ G   G  +LQ 
Sbjct: 21  GVPXNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRA-GXVVLQE 79
Query: 66  ENPDSLPKKSVINPKDNHLSFQCES--VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFH 123
           E           N +  H SF+ E   +  ++K L+  G+  V   V +       L+F 
Sbjct: 80  EKE---------NWQQQHFSFRVEKSEIEPLKKALESKGVS-VHGPVNQEWXQAVSLYFA 129
Query: 124 DPDGFMIEIC 133
           DP+G  +E  
Sbjct: 130 DPNGHALEFT 139

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	168
3ghj_A	141	Putative integron gene cassette protein; integron	3e-36
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	5e-33
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	2e-31
2p25_A	126	Glyoxalase family protein; structural genomics, MC	6e-30
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	2e-28
1nki_A	135	Probable fosfomycin resistance protein; potassium	9e-28
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	2e-27
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-27
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-26
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-26
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-26
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	1e-25
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-25
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	2e-23
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	7e-23
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	1e-22
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	6e-22
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	5e-21
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-19
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	8e-19
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-17
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	4e-16
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	3e-15
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	4e-15
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	1e-14
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	4e-14
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	1e-13
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-13
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-07
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-13
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-13
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	4e-13
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	1e-12
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	2e-12
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	2e-07
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	2e-12
2i7r_A	118	Conserved domain protein; structural genomics cons	3e-12
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	3e-12
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	4e-12
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	5e-12
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-11
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	2e-11
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	4e-11
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	1e-10
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	1e-10
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	1e-10
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	2e-10
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	6e-10
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	6e-10
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-10
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	4e-09
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	2e-07
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	6e-08
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	7e-07
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	6e-08
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	1e-07
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	8e-08
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	8e-08
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-07
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	2e-07
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	3e-07
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	6e-05
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	5e-07
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	2e-05
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	8e-07
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	6e-06
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	1e-06
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	4e-05
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	1e-06
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	1e-05
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	1e-06
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	2e-06
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	2e-06
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	2e-05
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	3e-04
1xy7_A	166	Unknown protein; structural genomics, protein stru	8e-04

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score =  121 bits (306), Expect = 3e-36
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 13/130 (10%)

Query: 6   GNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQS 65
           G P+++K +  V++  +N+ +S  FY  +LGF       +  ++  W+ G   G+ +LQ 
Sbjct: 21  GVPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRA-GMVVLQE 79

Query: 66  ENPDSLPKKSVINPKDNHLSFQCES--VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFH 123
           E           N +  H SF+ E   +  ++K L+  G+  V   V +  +    L+F 
Sbjct: 80  EKE---------NWQQQHFSFRVEKSEIEPLKKALESKGVS-VHGPVNQEWMQAVSLYFA 129

Query: 124 DPDGFMIEIC 133
           DP+G  +E  
Sbjct: 130 DPNGHALEFT 139

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score =  113 bits (284), Expect = 5e-33
 Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 9/122 (7%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           L+S+NH++L   ++ +S+ F+  +LG     R  +    GA+L    + + L   E    
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT----GAYLTCGDLWVCLSYDEARQY 57

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMI 130
           +P +   +      +   E    + + L++ G+   +    EG       +F DPDG  +
Sbjct: 58  VPPQE-SDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEG----ASFYFLDPDGHKL 112

Query: 131 EI 132
           E+
Sbjct: 113 EL 114

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score =  109 bits (273), Expect = 2e-31
 Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 14/132 (10%)

Query: 4   SAGNPLHLKSVNHVSLVC--RNISESIDFYQNVLGFVPIRRPGS-FNFDGAWLFGHGIGI 60
           S     +++ ++HV +        E+  FY   +G   I +P       G W       I
Sbjct: 1   SNAMRNYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEI 60

Query: 61  HLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQL 120
           H+   +N +          K  H +F    +   ++ L + GI+ +          V + 
Sbjct: 61  HIGVEQNFN--------PAKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPD---VIRF 109

Query: 121 FFHDPDGFMIEI 132
           +  DP G  IE 
Sbjct: 110 YVSDPFGNRIEF 121

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  105 bits (263), Expect = 6e-30
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 4/125 (3%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSENP 68
            K ++HV++   N   + +FY   LGF  +R       N     L      + +  S+  
Sbjct: 3   FKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQF 62

Query: 69  DSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGF 128
            + P          HL+F+ E +  V  FL E GI+     V++     +  FF DPDG 
Sbjct: 63  PARPSYPE-ALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTG-KKMTFFFDPDGL 120

Query: 129 MIEIC 133
            +E+ 
Sbjct: 121 PLELH 125

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 99.9 bits (249), Expect = 9e-28
 Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 16/124 (12%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           L  +NH++L   ++  SI FY+++LGF    R       GA+L    + + L +      
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD----QGAYLELGSLWLCLSREPQYGG 57

Query: 71  LPKKSVINPKDNHLSFQC--ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGF 128
            P          H +F             L+  G++  +    EG    +  +F DPDG 
Sbjct: 58  -PAADY-----THYAFGIAAADFARFAAQLRAHGVREWKQNRSEG----DSFYFLDPDGH 107

Query: 129 MIEI 132
            +E 
Sbjct: 108 RLEA 111

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 99.6 bits (248), Expect = 2e-27
 Identities = 32/148 (21%), Positives = 52/148 (35%), Gaps = 15/148 (10%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRR---PGSFNFD------GA 51
              S   P +L+ V+H++L  +++  S  FY  +LG   +     P +            
Sbjct: 7   SVNSVLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVAN 66

Query: 52  WLFGHGIGIHLLQSENPDSLPKKSVINPK-DNHLSFQCES--VGNVEKFLKEMGIKYVRA 108
           ++   G  + L                     HL+F  +          + E  I     
Sbjct: 67  FITPDGTILDLFGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHG 126

Query: 109 LVEEGGILVEQLFFHDPDGFMIEICDCD 136
            V         ++F+DPDGFMIEI  CD
Sbjct: 127 PVTRPTG--RGVYFYDPDGFMIEIR-CD 151

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 98.9 bits (246), Expect = 3e-27
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 8/135 (5%)

Query: 2   KESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIH 61
           K      + +  ++H+ L   +IS +I FY+ VLGF  +     F  +   L      I+
Sbjct: 12  KHHESIQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVT----FKQNRKALIFGAQKIN 67

Query: 62  LLQSENPDSLPKKSVINPKDNHLSFQC-ESVGNVEKFLKEMGIKYVRALVEEGGIL--VE 118
           L Q E     PK S   P    L F     + +V   + + GI  V   VE  G    + 
Sbjct: 68  LHQQEMEF-EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIM 126

Query: 119 QLFFHDPDGFMIEIC 133
            ++  DPDG +IEI 
Sbjct: 127 SIYIRDPDGNLIEIS 141

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 96.9 bits (241), Expect = 1e-26
 Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 4/127 (3%)

Query: 10  HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPD 69
           ++  +++V++  R+I     FYQ V GF  I    S  F G       IG +  ++    
Sbjct: 5   NMADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELM 64

Query: 70  SLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFFHDPD 126
            L + S  +     L+F  ++   V+K        G   ++A  E       Q    DP+
Sbjct: 65  QLAQFSETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWY-QAVLLDPE 123

Query: 127 GFMIEIC 133
             +  I 
Sbjct: 124 RNVFRIN 130

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 96.3 bits (240), Expect = 2e-26
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 12/131 (9%)

Query: 9   LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFG---HGIGIHLLQS 65
           + L  V+HVSL  R++  S  +Y  +L +  + R        ++  G    G+ I L + 
Sbjct: 1   MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLREH 58

Query: 66  ENPDSLPKKSVINPKDNHLSFQCESVGNVE---KFLKEMGIKYVRALVEEGGILVEQLFF 122
           +   +        P  +HLSF  ES+ +++   + L + G  +        G     L F
Sbjct: 59  DGGGT-DLFDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFG---WILAF 114

Query: 123 HDPDGFMIEIC 133
            D D   +E  
Sbjct: 115 RDADNIALEAM 125

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 96.0 bits (239), Expect = 2e-26
 Identities = 26/131 (19%), Positives = 56/131 (42%), Gaps = 9/131 (6%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           +  ++H++L+ ++++++  F QN+     I   G   F  +      I    +     DS
Sbjct: 2   ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDS 61

Query: 71  LPKKSVINPKDNHLSFQC--ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGF 128
           L +++      NH++FQ   E V    + +K +G++         G     ++F+D D  
Sbjct: 62  LQERTY-----NHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGE-GRSIYFYDFDNH 115

Query: 129 MIEICDCDNLP 139
           + E+     L 
Sbjct: 116 LFELH-AGTLE 125

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 94.6 bits (235), Expect = 1e-25
 Identities = 19/131 (14%), Positives = 48/131 (36%), Gaps = 9/131 (6%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           ++ ++H++ + R++       + V     +    +  F  +      IG   +     + 
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 71  LPKKSVINPKDNHLSFQC--ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGF 128
           L ++S      NH++F+          + + ++G+          G     ++F+D D  
Sbjct: 62  LAERSY-----NHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGE-GRSIYFYDDDNH 115

Query: 129 MIEICDCDNLP 139
           M E+     L 
Sbjct: 116 MFELH-TGTLT 125

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 93.8 bits (233), Expect = 2e-25
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 5   AGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQ 64
             N      ++HV +   ++ ESI F+  +LG +      S++   ++  G    +  +Q
Sbjct: 12  HENLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKHGKT-YLVFVQ 70

Query: 65  SENPDSLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVE--EGGILVEQ 119
           +E+    P         NHL+F   S   V++    LKE G   +        GG     
Sbjct: 71  TEDRFQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYA 130

Query: 120 LFFHDPDGFMIEI 132
           +F  DP+   +EI
Sbjct: 131 VFCEDPNRIKVEI 143

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 88.6 bits (220), Expect = 2e-23
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 10/134 (7%)

Query: 9   LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRR--PGSFNFDGAWLFGHGIGIHLLQSE 66
           + LK+V+HV+L+  +  +S +FY N LGF  IR       +     L    I + +  ++
Sbjct: 1   MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNK 60

Query: 67  NPDSLPKKSVINPKDN-------HLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQ 119
             DS                   HL+F  E V    + L  +GI+      ++     + 
Sbjct: 61  LTDSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTG-KKM 119

Query: 120 LFFHDPDGFMIEIC 133
            FF DPDG  +E+ 
Sbjct: 120 AFFFDPDGLPLELH 133

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 87.3 bits (216), Expect = 7e-23
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 8/132 (6%)

Query: 9   LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENP 68
           + +  ++H+ L   +I  + +FY+ VLG   +     F      L      I+L Q  N 
Sbjct: 6   MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVS----FGAGRIALEFGHQKINLHQLGNE 61

Query: 69  DSLPKKSVINPKDNHLSFQCE-SVGNVEKFLKEMGIKYVRALVEEGGIL--VEQLFFHDP 125
              PK   +      L F  +  + +  K +++ G+  +   V+  G    +   +F DP
Sbjct: 62  FE-PKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDP 120

Query: 126 DGFMIEICDCDN 137
           DG +IE+    N
Sbjct: 121 DGNLIEVSTYSN 132

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 86.6 bits (214), Expect = 1e-22
 Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 8/136 (5%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
            +      + ++ ++H+ +  ++I ++  FY  +LG   +     F  D   L       
Sbjct: 15  TENLYFQSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMT----FKEDRKALCFGDQKF 70

Query: 61  HLLQSENPDSLPKKSVINPKDNHLSFQCE-SVGNVEKFLKEMGIKYVRALVEEGGIL--V 117
           +L +       PK +   P    +    E  +  + + LK   +      V   G    +
Sbjct: 71  NLHEVGKEFE-PKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPI 129

Query: 118 EQLFFHDPDGFMIEIC 133
             ++F DPD  +IE+ 
Sbjct: 130 MSIYFRDPDRNLIEVS 145

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 85.6 bits (212), Expect = 6e-22
 Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 14/130 (10%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
             ++   +L   ++  +  FY++V G   + +           F  G  + LL      S
Sbjct: 6   PSAIMETALYADDLDAAEAFYRDVFGLEMVLKLP----GQLVFFKCGRQMLLLFDPQESS 61

Query: 71  LPKKSVINPKD-----NHLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFF 122
               +   P+       H  F  +    V   +   + + I          G     ++ 
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGS--YSVYI 119

Query: 123 HDPDGFMIEI 132
            DP G  +E+
Sbjct: 120 RDPAGNSVEV 129

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 83.9 bits (207), Expect = 5e-21
 Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 28/153 (18%)

Query: 15  NHVSLVCRNISESIDFYQNVLGFVPIRR---------------------PGSFNFDGAWL 53
               L  ++  +S+DFY  VLG   +++                     P   +   AW 
Sbjct: 33  QQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWT 92

Query: 54  FGHGIGIHLLQSENPDSLPKKSVINPKD-----NHLSFQCESVGNVEKFLKEMGIKYVRA 108
           F     + L  +   +    +S  N         H+      V +  K  +E+G+K+V+ 
Sbjct: 93  FSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 152

Query: 109 LVEEGGILVEQLFFHDPDGFMIEICDCDNLPVV 141
              + G +    F  DPDG+ IEI + + +  +
Sbjct: 153 P--DDGKMKGLAFIQDPDGYWIEILNPNKIATI 183

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 77.4 bits (191), Expect = 2e-19
 Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 17/121 (14%)

Query: 15  NHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK 74
            H++L   ++  + +F +   G       G    +   +     G  L   +  +     
Sbjct: 5   KHLNLTVADVVAAREFLEKYFGLTCSGTRG----NAFAVMRDNDGFILTLMKGKE----- 55

Query: 75  SVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIE 131
            V  PK  H+ F  ES   V+K    LKE G                  +   P GF IE
Sbjct: 56  -VQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHA----YTFYVEAPGGFTIE 110

Query: 132 I 132
           +
Sbjct: 111 V 111

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 76.9 bits (189), Expect = 8e-19
 Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 13/131 (9%)

Query: 9   LHLKS--VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSE 66
           L+ +     +     R+I+ S  FY++ LG   +       F    LF  G  IH  +S 
Sbjct: 2   LYFQGMRFVNPIPFVRDINRSKSFYRDRLGLKILED-----FGSFVLFETGFAIHEGRSL 56

Query: 67  NP----DSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFF 122
                  S   +     ++  L F+   V    + +    ++ +  L  +         F
Sbjct: 57  EETIWRTSSDAQEAYGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRV-FRF 114

Query: 123 HDPDGFMIEIC 133
           +DPDG  IE+ 
Sbjct: 115 YDPDGHAIEVG 125

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 72.7 bits (178), Expect = 3e-17
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 7/124 (5%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFN--FDGAWLFGHGIGIHLLQSENPDSL 71
           + HV+L   N+ +   FY    G        +    F+  +L     G  L      D  
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED-GARLEIMSRTDVT 62

Query: 72  PKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFFHDPDGF 128
            K +  N    H++    +   V++    L++ G          G    E     DP+G 
Sbjct: 63  GKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYE-SVVLDPEGN 121

Query: 129 MIEI 132
            IEI
Sbjct: 122 RIEI 125

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 70.3 bits (172), Expect = 4e-16
 Identities = 23/148 (15%), Positives = 50/148 (33%), Gaps = 20/148 (13%)

Query: 4   SAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRP-------------GSFNFDG 50
           +A     L  +++VS+V  ++  +I F++  +G     R              GS   + 
Sbjct: 2   NAMAKNKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEI 60

Query: 51  AWL--FGHGIGIHLLQSENPDSLPKKSVINPKD---NHLSFQCESVGNVEKFLKEMGIKY 105
           A +        I L +   P ++               + F  E +  +   L + G + 
Sbjct: 61  AMMVTPDGHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAEL 120

Query: 106 VRALVEEGGILVEQLFFHDPDGFMIEIC 133
           V  +V+         +    +G +I + 
Sbjct: 121 VGEVVQYENS-YRLCYIRGVEGILIGLA 147

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 67.5 bits (165), Expect = 3e-15
 Identities = 18/130 (13%), Positives = 43/130 (33%), Gaps = 10/130 (7%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRR---PGSFNFDGAWLFGHGIGIHLLQSEN 67
              V+H+    +NI  ++  ++ +                    ++   G  + L+  + 
Sbjct: 5   SLKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRK-VYIQFVINGGYRVELVAPDG 63

Query: 68  PDS-LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGI---LVEQLFFH 123
            DS + K         H+ ++ E +    + + ++G    +       I    V   F  
Sbjct: 64  EDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKV--AFLF 121

Query: 124 DPDGFMIEIC 133
             D  +IE+ 
Sbjct: 122 STDIGLIELL 131

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 67.4 bits (164), Expect = 4e-15
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 13/128 (10%)

Query: 10  HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPD 69
           H+   +   L   N   S  FY+ +LG  P+    +F     ++  +G+ + L      +
Sbjct: 22  HMTHPDFTILYVDNPPASTQFYKALLGVDPVESSPTF---SLFVLANGMKLGLWSRHTVE 78

Query: 70  SLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEG-GILVEQLFFHDP 125
                  +      L+F+ E+   V++     K  G+  ++   +   G         DP
Sbjct: 79  PKAS---VTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGY---TFTAADP 132

Query: 126 DGFMIEIC 133
           D   + + 
Sbjct: 133 DSHRLRVY 140

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 66.6 bits (162), Expect = 1e-14
 Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           L+ V  ++L   ++  S  FY    G+ P+ R     F   +     +    L     + 
Sbjct: 3   LQQVAVITLGIGDLEASARFYGEGFGWAPVFRNPEIIF---YQMNGFVLATWLVQNLQED 59

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFFHDPDG 127
           +       P    L+    +   V      L   G + +R         + + +  DPDG
Sbjct: 60  VGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGL-RGYVADPDG 118

Query: 128 FMIEIC 133
            + EI 
Sbjct: 119 HIWEIA 124

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 64.4 bits (157), Expect = 4e-14
 Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 7/130 (5%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSENP 68
           L  +NHV++   ++ ++  FY+N+LG                 ++      + LL     
Sbjct: 3   LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGL 62

Query: 69  DS---LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFH-- 123
           DS      +       +H+  + +++      LK+  I+ +   V+ G      +F H  
Sbjct: 63  DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPK 122

Query: 124 DPDGFMIEIC 133
           D  G ++E+ 
Sbjct: 123 DCGGVLVELE 132

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 65.5 bits (159), Expect = 1e-13
 Identities = 19/136 (13%), Positives = 37/136 (27%), Gaps = 20/136 (14%)

Query: 10  HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRR-PGSFNFDGAWLFGHGIGIHLLQSENP 68
           H+ S+  ++L    +   + FY N+LG   +     +F        G    I    + + 
Sbjct: 23  HMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQADAFTIQ----LGVSQ-IQFRAAADG 77

Query: 69  DSLPKKSVINPKDNHLSFQC--ESVGNVEKFLKEMGIKYVRA---LVEEGGILVEQLFFH 123
                         H++           + +L   G                     +  
Sbjct: 78  ---------TKPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVE 128

Query: 124 DPDGFMIEICDCDNLP 139
           DP G +IE+       
Sbjct: 129 DPSGNIIELISRQQAA 144

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 66.3 bits (161), Expect = 1e-13
 Identities = 24/141 (17%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 8   PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF----GHGIGIHLL 63
                 ++H++ +  +  E+ DFY  VLG   +++  +F+  G +        G    ++
Sbjct: 3   AKKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTII 62

Query: 64  QSENPDSLPKKSVINPKDNHLSFQ--CESVGNVEKFLKEMGIKYVRALVEEGGILVEQLF 121
                    +  + + +    S+     ++   EK L++  + Y +  +E  G     + 
Sbjct: 63  TFFPWAGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK--IERFGEQY--VE 118

Query: 122 FHDPDGFMIEICDCDNLPVVP 142
           F DP G  +EI + +      
Sbjct: 119 FDDPHGLHLEIVEREEGEANT 139

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 48.6 bits (115), Expect = 1e-07
 Identities = 17/133 (12%), Positives = 42/133 (31%), Gaps = 23/133 (17%)

Query: 10  HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPD 69
            +K     +L+     ++ D  +N++G   + + G F    +      + I L  +    
Sbjct: 150 AIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAGDIGNV-IDLKLTPIGR 208

Query: 70  SLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQ---------L 120
                  +    +H+++      + E  L        +  +   G  V           +
Sbjct: 209 GQMGAGTV----HHIAW---RANDDEDQLD------WQRYIASHGYGVTPVRDRNYFNAI 255

Query: 121 FFHDPDGFMIEIC 133
           +F +    + EI 
Sbjct: 256 YFREHGEILFEIA 268

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 63.1 bits (153), Expect = 2e-13
 Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 14/126 (11%)

Query: 19  LVCRNISESIDFYQNVLGF-VPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVI 77
           L C +I+ S  F+ +VLGF V   RP     +  +L   G+ + L              +
Sbjct: 11  LYCFDINVSQSFFVDVLGFEVKYERPDE---EFVYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 78  NP---KDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEG-------GILVEQLFFHDPDG 127
                   +  +    +  + + + E     +   +E             +Q     PDG
Sbjct: 68  EFPLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDG 127

Query: 128 FMIEIC 133
           ++   C
Sbjct: 128 YLFRFC 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 62.6 bits (152), Expect = 2e-13
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 18/136 (13%)

Query: 10  HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRR-PGSFNFDGAWLFGHGIGIHLLQSENP 68
            ++           + E I FY+  L    I        +DG          HL  ++  
Sbjct: 12  QIRIARPTG----QLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE 67

Query: 69  DSLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALV---EEGGILVEQLFF 122
                       D+ L F   +   +      LK MG + V +       GG+       
Sbjct: 68  GGSTAPV--PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGV-----TI 120

Query: 123 HDPDGFMIEICDCDNL 138
            DPDG+ I   +   +
Sbjct: 121 EDPDGWRIVFMNSKGI 136

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 60.4 bits (146), Expect = 1e-12
 Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 12/133 (9%)

Query: 8   PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSEN 67
                + N   +   N+  S DFY+ +    P+     +       F            +
Sbjct: 8   AGPTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTPRYV-----AFPSSGDALFA-IWS 61

Query: 68  PDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEM---GIKYVRALVEEGGILVEQLF-FH 123
               P   +  P+ + +     +  +V+K   E        +  + E    +  + F   
Sbjct: 62  GGEEPVAEI--PRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLIS 119

Query: 124 DPDGFMIEICDCD 136
           DPDG +I +C  D
Sbjct: 120 DPDGHIIRVCPLD 132

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 62.7 bits (152), Expect = 2e-12
 Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 12/135 (8%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAW--LFGHGIGIHLLQ---S 65
           +K  +H+S+V +N +E+  FY+NVLG   ++   + +    +   +G   G    +    
Sbjct: 28  IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFF 87

Query: 66  ENPDSLPKKSVINPKDNHLSFQ---CESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFF 122
           E P         N     +       +S+   ++  ++  +K+              L F
Sbjct: 88  EIPLVGRTYRGTN-AITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANR---PALQF 143

Query: 123 HDPDGFMIEICDCDN 137
            D +G  + +   + 
Sbjct: 144 EDAEGLRLVLLVSNG 158

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 18/123 (14%), Positives = 45/123 (36%), Gaps = 10/123 (8%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPK 73
           +  V L  R + +       + G+  + R        +        I +   + P   P 
Sbjct: 181 MGSVELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQSIKGEAFGEIVVKYLDGPTEKPG 240

Query: 74  KSVINPKDNHLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMI 130
           +       +HL+ + ++   +   E+ +K+ G      +++      + L+F + +G + 
Sbjct: 241 R----GSIHHLAIRVKNDAELAYWEEQVKQRGFH-SSGIIDRFYF--KSLYFRESNGILF 293

Query: 131 EIC 133
           EI 
Sbjct: 294 EIA 296

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 60.1 bits (145), Expect = 2e-12
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 11/121 (9%)

Query: 15  NHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK 74
           N V    +N ++S +FY+N+L   PI    +F     ++   G+ + L   E  +    +
Sbjct: 8   NLVLFYVKNPAKSEEFYKNLLDTQPIESSPTF---AMFVMKTGLRLGLWAQEEIEPKAHQ 64

Query: 75  SVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIE 131
           +        LSFQ  S   V++      +  I  ++   +            DPD   + 
Sbjct: 65  T---GGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDF--GYTFVGVDPDEHRLR 119

Query: 132 I 132
           I
Sbjct: 120 I 120

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 59.0 bits (143), Expect = 3e-12
 Identities = 20/119 (16%), Positives = 38/119 (31%), Gaps = 10/119 (8%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPK 73
           +N + ++  N+ +     +++L          F       F  G    +L   +   L  
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKADYANDGF-----AQFTIGSHCLMLSQNHLVPLEN 60

Query: 74  KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI 132
                     +  + E V    K L E+GIK +           E L    P G +++ 
Sbjct: 61  F----QSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDF 114

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 59.4 bits (144), Expect = 3e-12
 Identities = 20/120 (16%), Positives = 38/120 (31%), Gaps = 15/120 (12%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKS 75
             ++     + +  FY ++LG       G      +        +   +           
Sbjct: 10  VANIATPEPARAQAFYGDILGMPVAMDHGWIVTHAS-PLEAHAQVSFAREGGSG------ 62

Query: 76  VINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEIC 133
                   LS + ++   V   + + G+      V E  G   V++LF  DP G +I I 
Sbjct: 63  ---TDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWG---VQRLFLRDPFGKLINIL 116

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 59.9 bits (145), Expect = 4e-12
 Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 23/148 (15%)

Query: 7   NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRR----------------PGSFNFDG 50
           N L +++   + +V R+I ES+  Y    G    +                 P       
Sbjct: 13  NILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKL 72

Query: 51  AWLFGHGIGIHLLQSENPDSLPKKSVINPKD--NHLSFQCESVGNVEKFLKEMGIKYVRA 108
           A+     + + L++ +   S  ++ +    +  +H++F  + +    + L   G+K ++ 
Sbjct: 73  AFFELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK 132

Query: 109 LVEEGGILVEQLFFH--DPDGFMIEICD 134
              EGG      +         MIE+ +
Sbjct: 133 GDFEGG---RYAYIDTLRALKVMIELLE 157

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 59.5 bits (144), Expect = 5e-12
 Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 6/130 (4%)

Query: 10  HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRR--PGSFNFDGAWLFGHGIGIHLLQSEN 67
               ++H+ +   +I + + FY   L    +      S     A+L      I LL+  +
Sbjct: 5   KSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLS 64

Query: 68  PDSLPKKSVINPKD--NHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFH-- 123
            +S   K +    +  +H++   +S+    + +KE G++ +      G    +  F H  
Sbjct: 65  EESPIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPR 124

Query: 124 DPDGFMIEIC 133
              G + E C
Sbjct: 125 SARGVLYEFC 134

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 57.8 bits (139), Expect = 1e-11
 Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 13/122 (10%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKS 75
           H+++  R++ E+ DFY   LG    RR          +     G  L+   +     + S
Sbjct: 12  HLAIPARDLDEAYDFYVTKLGCKLARRY------PDRITLDFFGDQLVCHLSDRWDREVS 65

Query: 76  VINPKDNHLSFQCESVGNVEKFLKEMGIK-----YVRALVEEGGILVEQLFFHDPDGFMI 130
           +            +   N+ K  K+ GI        R          E  F  DP   ++
Sbjct: 66  MYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEH--ETFFLIDPSNNLL 123

Query: 131 EI 132
           E 
Sbjct: 124 EF 125

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 57.9 bits (140), Expect = 2e-11
 Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 12/120 (10%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKS 75
              L   +++ +++FY+ +L      R   F      +    I   LL + + ++L    
Sbjct: 9   LSRLYVADLNPALEFYEELLETPVAMR---FEIPQTGVELAQISTILLIAGSEEALK--- 62

Query: 76  VINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEE-GGILVEQLFFHDPDGFMIEICD 134
               ++   +F  +S+   + FL+E G + +R   +   G     +     DG +IE  +
Sbjct: 63  --PFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGR---NMTVRHSDGSVIEYVE 117

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 56.8 bits (137), Expect = 4e-11
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 18/129 (13%)

Query: 15  NHVSLVCRNISESIDFYQNVLGFVPIRRPGS-----FNFDGAWLFGHGIGIHLLQSENPD 69
           +  ++V  ++++S++FY+  LG        S        DG         +  ++S +P+
Sbjct: 6   SLFAVVVEDMAKSLEFYR-KLGVEIPAEADSAPHTEAVLDGGIRLAWD-TVETVRSYDPE 63

Query: 70  SLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEE--GGILVEQLFFHD 124
                         ++F+     +V+K    L + G +          G          D
Sbjct: 64  WQAPTG---GHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYA---IVKD 117

Query: 125 PDGFMIEIC 133
           PDG ++++ 
Sbjct: 118 PDGNVVDLF 126

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 55.5 bits (134), Expect = 1e-10
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 10/126 (7%)

Query: 15  NHVSLVCRNISESIDFYQNVLGFVPIRR----PGSFN--FDGAWLFGHGIGIHLLQSENP 68
            H  L   ++  SIDFY  VLG   +R        ++  F G         I L  +   
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 69  DSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGF 128
           D     +       H++   ++     + +++ G    R      G      F  DPDG+
Sbjct: 64  DKYELGTAY----GHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGY 119

Query: 129 MIEICD 134
            IE+ +
Sbjct: 120 KIELIE 125

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 55.3 bits (133), Expect = 1e-10
 Identities = 16/115 (13%), Positives = 38/115 (33%), Gaps = 6/115 (5%)

Query: 19  LVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVIN 78
           L  R+++E+++F+ + LGF  +     F    A +    + + +   ++           
Sbjct: 11  LTARDVAEAVEFWTDRLGFSRVFVEDDF----AGVVRDDVTLFISAVQDQVVPDNTQAWV 66

Query: 79  PKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC 133
                     E    V    ++     +  +VE+      +    DP G  +   
Sbjct: 67  WVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFV 119

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 55.5 bits (134), Expect = 1e-10
 Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 11/129 (8%)

Query: 15  NHVSLVCRNISESIDFYQNVLGFVPIRRPGS--FNFDGAWL-FGHGIGIHLLQ-SENPDS 70
            H  +   ++  SI FY   LG   +R+       +   +L +G  +   +L+ + N   
Sbjct: 10  LHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG- 68

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMI 130
                  +    H++   E V  +   +++  +       E G +     F  DPDG+ I
Sbjct: 69  -VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYED-ESGFM----AFVVDPDGYYI 122

Query: 131 EICDCDNLP 139
           E+ +   + 
Sbjct: 123 ELLNEKTMM 131

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 54.7 bits (131), Expect = 2e-10
 Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 14/142 (9%)

Query: 6   GNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRR--------PGSFNFDGAWLFGHG 57
            N      ++HV+  C +  E+  +YQ   G+  + R                A L  H 
Sbjct: 2   SNEDLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHM 61

Query: 58  IGIHLLQSENPDS----LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEG 113
             + ++   N +S       K       +H++++ + +  V   L+E G++ +    + G
Sbjct: 62  TQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLG 121

Query: 114 GILVEQLFFH--DPDGFMIEIC 133
                  F H     G +IE+ 
Sbjct: 122 TGGNRINFMHPKSGKGVLIELT 143

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 53.4 bits (128), Expect = 6e-10
 Identities = 22/122 (18%), Positives = 47/122 (38%), Gaps = 12/122 (9%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGF-VPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLP 72
           +  +++   ++   + FY+ ++GF     +    +     +   G+   L   +NP    
Sbjct: 7   ITSITINTSHLQGMLGFYR-IIGFQFTASKVDKGSEVHRAVHN-GVEFSLYSIQNPQRSQ 64

Query: 73  KKSVINPKDNHLSFQCESVGN-VEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIE 131
             S+       L FQ   +   V++ +K  G   +    +      ++    DPDG  IE
Sbjct: 65  IPSL------QLGFQITDLEKTVQELVKIPGAMCILDPTDMPD--GKKAIVLDPDGHSIE 116

Query: 132 IC 133
           +C
Sbjct: 117 LC 118

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 53.3 bits (128), Expect = 6e-10
 Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 17/121 (14%)

Query: 19  LVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVIN 78
           L   ++ E++  + + LGF    R  ++    A+L   G G+ LL+      +P      
Sbjct: 13  LHIPDMQEALTLFCDTLGFELKYRHSNY----AYLELSGCGLRLLEEPARKIIPDGI--- 65

Query: 79  PKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQ------LFFHDPDGFMIEI 132
                ++   + V +++    ++         ++   L              PDG  +  
Sbjct: 66  ---ARVAICID-VSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNF 121

Query: 133 C 133
            
Sbjct: 122 T 122

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 53.6 bits (128), Expect = 7e-10
 Identities = 20/126 (15%), Positives = 49/126 (38%), Gaps = 11/126 (8%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF------GHGIGIHLLQSEN 67
           ++  ++   + +++  FY   LGF+             WL         G  + L  S +
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVP--VGADRWLTVVSPEAPDGTQLLLEPSSH 84

Query: 68  PDSLP-KKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPD 126
               P K++++       SF  + +    + L  +G+++ +   + G ++       D  
Sbjct: 85  AAVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVT--AILDDTC 142

Query: 127 GFMIEI 132
           G +I++
Sbjct: 143 GNLIQL 148

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 53.5 bits (128), Expect = 4e-09
 Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 16/129 (12%)

Query: 8   PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSEN 67
              +  +    L      E++DF+   LG     R G       +L G+           
Sbjct: 6   RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG----QSVYLRGYEDPYP------ 55

Query: 68  PDSLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFFHD 124
             SL           H + +  S   +E+    L +  +    +  + G    +   +  
Sbjct: 56  -WSLKITEAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGY--GKTFEYQS 112

Query: 125 PDGFMIEIC 133
           PDG  +++ 
Sbjct: 113 PDGHNLQLL 121

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 23/148 (15%), Positives = 56/148 (37%), Gaps = 27/148 (18%)

Query: 8   PLHLKSVNHVSLVCRNISESIDFYQNVLGFVP---IRRPGSFNFDGAWLFGHGIG--IHL 62
            + +K ++H++L+  +++   D ++  LGF     +         GAW+  + +G  +  
Sbjct: 148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVVDGNVEI--GAWMSSNLLGHEVAC 205

Query: 63  LQSENPDSLPKKSVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGG--ILV 117
           ++             + K +HL+F   +  +        ++  I+             + 
Sbjct: 206 MRDMTGG--------HGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGP----DKHGIT 253

Query: 118 EQLF--FHDPDGFMIEI-CDCDNLPVVP 142
           +  F    +P G  IE+  +   L + P
Sbjct: 254 QSQFLYVFEPGGNRIELFGEAGYLHLDP 281

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 49.8 bits (119), Expect = 6e-08
 Identities = 21/153 (13%), Positives = 44/153 (28%), Gaps = 29/153 (18%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVP---IRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
            +H  +    +  + D +  VLGF     +           +L        +    +P+ 
Sbjct: 151 FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRV-AQFLSLSTKAHDVAFIHHPE- 208

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGG--ILVEQLF--FH 123
                    + +H+SF  E+  ++ +    +                   L       F 
Sbjct: 209 -------KGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGP----TRHGLTHGKTIYFF 257

Query: 124 DPDGFMIEIC------DCDNLPVVPLVGDVARS 150
           DP G   E+         D+ PV      + ++
Sbjct: 258 DPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKA 290

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 46.8 bits (111), Expect = 7e-07
 Identities = 19/125 (15%), Positives = 41/125 (32%), Gaps = 21/125 (16%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIH----LLQSENPDSL 71
           HV L   ++S++++ Y  +LG + + R         +L            L +++ P   
Sbjct: 10  HVQLRVLDMSKALEHYVELLGLIEMDRDDQ---GRVYLKAWTEVDKFSLVLREADEPGM- 65

Query: 72  PKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFFHDPDGF 128
                     + + F+      + +    L   G    +    E      ++ F  P G 
Sbjct: 66  ----------DFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGH 115

Query: 129 MIEIC 133
             E+ 
Sbjct: 116 HFELY 120

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 49.9 bits (119), Expect = 6e-08
 Identities = 27/137 (19%), Positives = 38/137 (27%), Gaps = 23/137 (16%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVP---IRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLP 72
           H  L   NI+E    +  VLGF     +  P   +  G WL        +   E P+   
Sbjct: 154 HCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYPE--- 210

Query: 73  KKSVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGG--ILVEQLF--FHDP 125
                  K +H SF  ES   V +    +    +              +         DP
Sbjct: 211 -----KGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGP----TRHGVTRGCTIYAWDP 261

Query: 126 DGFMIEICDCDNLPVVP 142
            G   E          P
Sbjct: 262 SGNRFETF-MGGYHPYP 277

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 49.1 bits (117), Expect = 1e-07
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIH----LLQSE 66
           +    H  +   N+ E I FY+NVLG V   R         +        H    + +++
Sbjct: 6   VLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ---GRVYFKCWDERDHSCYIIREAD 62

Query: 67  NPDSLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQLFFH 123
                          +   F+      +EK    L+  G+   R    E     E++ F 
Sbjct: 63  TAGI-----------DFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFE 111

Query: 124 DPDGFMIEIC 133
            P G +IE+ 
Sbjct: 112 LPSGHLIELY 121

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 47.5 bits (113), Expect = 8e-08
 Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 24/123 (19%)

Query: 19  LVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVIN 78
           L   ++  ++ F+ + LGF        F    A +    I +H+ ++E+           
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDF----AGVRRGDIRLHISRTEHQIV-------- 58

Query: 79  PKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVE---------QLFFHDPDGFM 129
             +     +   V + +   +E          +  G  +          +    DP G  
Sbjct: 59  ADNTSAWIE---VTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNC 115

Query: 130 IEI 132
           +  
Sbjct: 116 VHF 118

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 49.5 bits (118), Expect = 8e-08
 Identities = 30/138 (21%), Positives = 45/138 (32%), Gaps = 30/138 (21%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKS 75
           H+ L   N  + + F+ +VLGF      G F     +L  +     +     P  L    
Sbjct: 144 HIVLHSPNHQDMVKFFTDVLGFKVSDWLGDF---MCFLRCNSAHHRIAILPGPPCL---- 196

Query: 76  VINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGG--ILVEQLF--FHDPDGF 128
                 NH+++   SV ++ +    LK  GI          G        F  F  P GF
Sbjct: 197 ------NHVAYDMLSVDDMMRGAHRLKVKGIDIGWGP----GRHTAGNNTFSYFVTPGGF 246

Query: 129 MIEIC------DCDNLPV 140
           + E        D D    
Sbjct: 247 VTEYTSELEEVDFDTHQY 264

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 49.1 bits (117), Expect = 1e-07
 Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 21/129 (16%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIH--LLQSENP 68
           +  + +V    ++      FY +V G  P+        + AW    G   H  +      
Sbjct: 6   VTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----NNAWFKAQGADEHHVVQLRRAD 61

Query: 69  DSLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVR--ALVEEGGILVEQLFFH 123
           +          + + ++   +S  +V+     ++  G K     A++   G       F 
Sbjct: 62  E---------NRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGG-GYGFRFF 111

Query: 124 DPDGFMIEI 132
            PDG + E+
Sbjct: 112 SPDGLLFEV 120

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 24/139 (17%), Positives = 48/139 (34%), Gaps = 22/139 (15%)

Query: 1   MKESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
           + +       +    +  LV  ++++S +FY +VLG            +  +L      I
Sbjct: 5   IPKPVAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE----NQIYLRSFEEFI 60

Query: 61  H----LLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEG 113
           H    L +                   ++F+  +  +V+K     +E+G +  R      
Sbjct: 61  HHNLVLTKGPVAAL-----------KAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFV 109

Query: 114 GILVEQLFFHDPDGFMIEI 132
             + + L   DP GF  E 
Sbjct: 110 KGIGDALRVEDPLGFPYEF 128

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 47.6 bits (113), Expect = 3e-07
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 22/132 (16%)

Query: 8   PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIH----LL 63
              +    ++ +V  ++++S +FY +VLG            +  +L      IH    L 
Sbjct: 12  APDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVLR 67

Query: 64  QSENPDSLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQL 120
           Q                    +++ +S   V+      KE+G +  R        + + +
Sbjct: 68  QGPIAAV-----------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSV 116

Query: 121 FFHDPDGFMIEI 132
              DP GF  E 
Sbjct: 117 RVEDPLGFPYEF 128

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 41.1 bits (96), Expect = 6e-05
 Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 19/125 (15%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVP---IRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLP 72
           H + V  ++     + +  LGF     I+      +  AW+           +       
Sbjct: 155 HFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTY-AAWMHRKQTVHDTALTGGNG--- 209

Query: 73  KKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEG---GILVEQLF--FHDPDG 127
                 P+ +H++F      N+ +   +MG   +   +E G     +    +    DPDG
Sbjct: 210 ------PRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDG 263

Query: 128 FMIEI 132
             IEI
Sbjct: 264 HRIEI 268

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 47.3 bits (112), Expect = 5e-07
 Identities = 28/139 (20%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 5   AGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVP---IRRPGSFNFDGAWLFGHGIGIH 61
                  + + HV L  R+ +E++ FY++VLGF     +R P                  
Sbjct: 134 HRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMV-GRPADGPPAWLRF 192

Query: 62  LLQSENPDSLP-KKSVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGG--I 115
              +    SL       +    HL  + E   +V           +     L    G  +
Sbjct: 193 FGCNPRHHSLAFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATL----GRHV 248

Query: 116 LVEQLFF--HDPDGFMIEI 132
               L F    P GF IE 
Sbjct: 249 NDLMLSFYMKTPGGFDIEF 267

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 19/127 (14%), Positives = 45/127 (35%), Gaps = 17/127 (13%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           ++S+ ++ +   +++   ++   VLG V  +          +L        L+       
Sbjct: 3   IRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE---GALYLRMDDFPARLVVVPGEH- 58

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGIL-VEQLF-FHDP 125
                    +     ++C +   +++    L   G  Y  A   E     V+++  F DP
Sbjct: 59  --------DRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADP 110

Query: 126 DGFMIEI 132
            G  +E+
Sbjct: 111 SGNCLEV 117

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 46.4 bits (110), Expect = 8e-07
 Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 22/130 (16%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWL--FGHGIGIHLLQSENP 68
           ++S+ ++     +++    F    LG +          +G           I + Q E  
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDLFRIDSRAWRIAVQQGEVD 57

Query: 69  DSLPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGIL-VEQLF-FH 123
           D                ++      + +    LK+ GI              V  L  F 
Sbjct: 58  DL-----------AFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFA 106

Query: 124 DPDGFMIEIC 133
           DP G  +EI 
Sbjct: 107 DPFGLPLEIY 116

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 44.1 bits (104), Expect = 6e-06
 Identities = 20/144 (13%), Positives = 39/144 (27%), Gaps = 33/144 (22%)

Query: 6   GNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVP---IRRPGSFNFDGAWLFGHGIGIH- 61
           G     + + H      +  +++ FY +VLGF     I      +      F H    H 
Sbjct: 135 GFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHH 194

Query: 62  ---LLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGGI 115
              +     P           + +H   +  S+ +V      +   G+           +
Sbjct: 195 TLAIAAFPLP----------KRIHHFMLEVASLDDVGFAFDRVDADGLI-------TSTL 237

Query: 116 ----LVEQLF--FHDPDGFMIEIC 133
                   +      P G  +E  
Sbjct: 238 GRHTNDHMVSFYASTPSGVEVEYG 261

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 46.2 bits (109), Expect = 1e-06
 Identities = 16/129 (12%), Positives = 42/129 (32%), Gaps = 20/129 (15%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           ++ + ++    +++     F    +G +     G    D A          +        
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DAALYRADQRAWRIAVQPGEL- 56

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRA---LVEEGGILVEQLFFHD 124
                       +   + +    +E+    L++ G+ + R    L+++  ++   L   D
Sbjct: 57  --------DDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVM-GLLCLQD 107

Query: 125 PDGFMIEIC 133
           P G  +EI 
Sbjct: 108 PFGLPLEIY 116

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 24/141 (17%), Positives = 40/141 (28%), Gaps = 25/141 (17%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVP---IRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           + H      + ++++ FY  VLGFV    I             F H  G H   +     
Sbjct: 143 IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP 202

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGGI----LVEQLFF- 122
           +PK+       +H   Q  ++ +V      L   G            +      + L F 
Sbjct: 203 IPKRI------HHFMLQANTIDDVGYAFDRLDAAGRI-------TSLLGRHTNDQTLSFY 249

Query: 123 -HDPDGFMIEICDCDNLPVVP 142
              P   +          V  
Sbjct: 250 ADTPSPMIEVEFGWGPRTVDS 270

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 24/163 (14%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           +  + ++ L   N+    D+   ++G   +        D           H +      S
Sbjct: 4   VTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE----DDRIYLRMDRWHHRIVLHADGS 59

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGIL-VEQLF-FHDP 125
                       ++ ++      +++    LK  GI +  A   +     V  L   HDP
Sbjct: 60  --------DDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDP 111

Query: 126 DGFMIEIC-------DCDNLPVVPLVGDVARSCARVNSVQQMV 161
            G   EI             P  P+ G        +  +    
Sbjct: 112 GGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIRE 154

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 24/138 (17%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVP--IRRPGSFNFDGAWLFGHGIGIH--LLQSENPDSL 71
           H+ +   ++ E+  FY+ +        +        G  +F H    H  L     P   
Sbjct: 149 HIIIREDDVEEATRFYRLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVGPM-- 206

Query: 72  PKKSVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGG--ILVEQLFF--HD 124
                 + + NHL  +   + ++      +++  I     +    G     E L F   +
Sbjct: 207 ------DKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQI----GKHSNDEALTFYCAN 256

Query: 125 PDGFMIEICDCDNLPVVP 142
           P G++ E     + P   
Sbjct: 257 PSGWLWEPG-WGSRPAPA 273

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 14/119 (11%), Positives = 40/119 (33%), Gaps = 7/119 (5%)

Query: 19  LVCRNISESIDFYQNVLGF--VPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSV 76
              +++ +++ +++ +LG+    + R      D   +F +   + +              
Sbjct: 27  YFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFKG 86

Query: 77  INPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEIC 133
              K        E +  + K++KE G   +  +  +  G     +      DG ++   
Sbjct: 87  EPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWG---ARECSITTTDGCILRFF 142

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 20/121 (16%), Positives = 39/121 (32%), Gaps = 18/121 (14%)

Query: 19  LVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVIN 78
           L  R+   +  FY+  LGF  + R   +      L    + +      +P   P  S  +
Sbjct: 9   LPSRDFDSTAAFYER-LGFGIVFRDAGW----MILQRGDLMLEF--FAHPGLDPLASWFS 61

Query: 79  PKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQ------LFFHDPDGFMIEI 132
                   + + +    +  K +GI+   +          Q          DPDG ++ +
Sbjct: 62  -----CCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRL 116

Query: 133 C 133
            
Sbjct: 117 I 117

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 44.0 bits (104), Expect = 2e-06
 Identities = 19/119 (15%), Positives = 35/119 (29%), Gaps = 6/119 (5%)

Query: 17  VSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSV 76
           V L   +   ++D+   V GF  + R  +           G GI +++          + 
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRHADLDTGGGIVMVRRTGEPYTVSCAG 65

Query: 77  INPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEIC 133
                  +      V          G   V+ L ++  G     Q    D +G + E  
Sbjct: 66  -GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGL---RQYLVRDLEGHLWEFT 120

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 17/128 (13%), Positives = 34/128 (26%), Gaps = 17/128 (13%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           +  + ++ +  ++      F  ++LG   +           +        H +   +   
Sbjct: 7   VIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE----KDRFYLRMDYWHHRIVVHHNGQ 62

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGIL-VEQLF-FHDP 125
                       +L ++       E     L + G K       E     V  L    DP
Sbjct: 63  --------DDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDP 114

Query: 126 DGFMIEIC 133
            G   EI 
Sbjct: 115 GGNPTEIF 122

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 24/139 (17%), Positives = 42/139 (30%), Gaps = 26/139 (18%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVP---IRRPGSFNFDGAWLFGHGIGIH--LLQSENPDS 70
           H  +   +++E+  FY ++LGF      R P          F H       +     P  
Sbjct: 152 HCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGAMPA- 209

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGG--ILVEQLFF--H 123
                    + NHL  +   + ++        +  I     L    G     + L F   
Sbjct: 210 -------AKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQL----GIHANDKALTFYGA 258

Query: 124 DPDGFMIEICDCDNLPVVP 142
            P G++IE         + 
Sbjct: 259 TPSGWLIEPG-WRGATAID 276

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 37.3 bits (86), Expect = 8e-04
 Identities = 12/153 (7%), Positives = 30/153 (19%), Gaps = 34/153 (22%)

Query: 2   KESAGNPLHLKSVN-HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGI 60
                  L        + +  + + +++ FY++  G +                     +
Sbjct: 14  AGPVETHLVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHS--LYPKRKLDQELPHVL 71

Query: 61  H----------LLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALV 110
                      ++   +       +             +                V   V
Sbjct: 72  SSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTKDAE-----------AAVAKAV 120

Query: 111 EEGGILVEQL----------FFHDPDGFMIEIC 133
           + G + VE               DP G      
Sbjct: 121 DAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFA 153

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	168
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.92
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.91
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.91
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.9
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.9
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.9
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.89
3ghj_A	141	Putative integron gene cassette protein; integron	99.89
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.88
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.88
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.88
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.87
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.87
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.87
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.87
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.87
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.87
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.87
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.87
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.86
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.86
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.86
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.86
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.86
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.86
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.86
2i7r_A	118	Conserved domain protein; structural genomics cons	99.86
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.85
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.85
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.85
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.85
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.85
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.85
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.84
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.84
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.84
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.84
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.84
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.83
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.83
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.83
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.82
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.81
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.81
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.81
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.8
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.79
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.78
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.77
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.77
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.77
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.76
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.76
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.76
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.75
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.75
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.75
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.74
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.74
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.74
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.74
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.74
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.74
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.73
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.73
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.72
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.72
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.72
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.71
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.71
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.71
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.71
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.71
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.71
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.69
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.69
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.69
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.67
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.66
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.64
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.61
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.59
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.59
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.58
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.56
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.55
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.55
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.52
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.52
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.43
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.43
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.4
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.36
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.35
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.31
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.27
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.2
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.19
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.17
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.49
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.39
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	97.7
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	97.4
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	97.22
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	95.42
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	94.42
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	93.92
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	93.78
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	93.63
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	93.38
2p25_A	126	Glyoxalase family protein; structural genomics, MC	92.82
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	92.76
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	92.68
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	92.48
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	92.07
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	91.93
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	91.66
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	91.53
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	90.55
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	90.43
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	90.39
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	89.76
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	89.51
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	89.31
3ghj_A	141	Putative integron gene cassette protein; integron	88.07
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	87.82
1nki_A	135	Probable fosfomycin resistance protein; potassium	87.57
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	87.36
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	86.51
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	84.4
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	83.69
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	83.58
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	82.93
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	82.64
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	82.04
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	80.13

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.92  E-value=8.7e-24  Score=140.65  Aligned_cols=127  Identities=22%  Similarity=0.373  Sum_probs=101.1

Q ss_pred             CCCCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972            5 AGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus         5 ~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      ++.+|++.+++|+.|.|+|++++++||+++|||+......    ..+++..++..+.+........ +.......+..|+
T Consensus         2 ~~~~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~   76 (133)
T 3ey7_A            2 MEFLMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA----GRIALEFGHQKINLHQLGNEFE-PKAQNVRVGSADL   76 (133)
T ss_dssp             CSCCCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----TEEEEEETTEEEEEEETTSCCS-SCCTTCCTTCCEE
T ss_pred             CceEeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC----CeEEEEcCCEEEEEEcCCCCcc-ccCCCCCCCccEE
Confidence            4567889999999999999999999999999999987653    4566777777888877654322 2212335677999


Q ss_pred             EEEeCC-HHHHHHHHHHcCCeEEeeeeeeCC--eeEEEEEEECCCCCEEEEEeeC
Q 030972           85 SFQCES-VGNVEKFLKEMGIKYVRALVEEGG--ILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        85 ~~~v~d-l~~~~~~l~~~g~~~~~~~~~~~g--~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +|.|+| +++++++|+++|+++...+....+  ...+.+||.|||||.|||+++.
T Consensus        77 ~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           77 CFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             EEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             EEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            999996 999999999999999877644322  2347899999999999999975

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.91  E-value=8.9e-23  Score=139.23  Aligned_cols=132  Identities=22%  Similarity=0.274  Sum_probs=98.6

Q ss_pred             ccCCCCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC--------CCcceeEEecCC-cEEEEeecCCCCCCCC
Q 030972            3 ESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS--------FNFDGAWLFGHG-IGIHLLQSENPDSLPK   73 (168)
Q Consensus         3 ~~~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--------~~~~~~~~~~~~-~~~~l~~~~~~~~~~~   73 (168)
                      +..++++++++|+||.|.|+|++++++||+++|||++......        .....+++..++ ..++|+..........
T Consensus         9 ~~~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~   88 (156)
T 3kol_A            9 NSVLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDP   88 (156)
T ss_dssp             CCCCCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSS
T ss_pred             ccccCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCC
Confidence            3445678889999999999999999999999999998863210        011335565544 6788887665422111


Q ss_pred             -CCCCCCCceEEEEEeC--CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           74 -KSVINPKDNHLSFQCE--SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        74 -~~~~~~~~~hl~~~v~--dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                       ......+..|++|.|+  |+++++++|+++|+++...+.... .+ +.+||+|||||.|||++..
T Consensus        89 ~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A           89 NPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRP-TG-RGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             STTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC--CC-EEEEEECTTSCEEEEEECC
T ss_pred             CCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecC-Cc-cEEEEECCCCCEEEEEecC
Confidence             1123467899999998  999999999999999987765543 22 4799999999999999864

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.91  E-value=5.6e-23  Score=136.52  Aligned_cols=125  Identities=26%  Similarity=0.336  Sum_probs=93.5

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC--CCcceeEEecCCcEEEEeec-------CCCCCCCCCCCCCC
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS--FNFDGAWLFGHGIGIHLLQS-------ENPDSLPKKSVINP   79 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~   79 (168)
                      |++++++||.|.|+|++++++||+++|||+...+...  .....+++..++..++++..       ..............
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREAC   80 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCC
Confidence            5688999999999999999999999999999865321  11224566777778888883       22211111111455


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           80 KDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +..|++|.|+|+++++++|+++|+++...+.... .+.+.+||.|||||.|||++
T Consensus        81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYDDY-TGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTT-SCCEEEEEECTTCCEEEEEC
T ss_pred             CeEEEEEEECCHHHHHHHHHhCCCcccceeccCC-CceEEEEEECCCCCEEEEeC
Confidence            7789999999999999999999999876655432 23467999999999999985

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.90  E-value=1.1e-22  Score=138.86  Aligned_cols=126  Identities=28%  Similarity=0.402  Sum_probs=96.6

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      .+|++.+|+||.|.|+|++++++||+++|||++....+    ..+++..++..+.+........ +.......+..|++|
T Consensus        17 ~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~----~~~~l~~~~~~l~l~~~~~~~~-~~~~~~~~g~~hi~f   91 (152)
T 3huh_A           17 IQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ----NRKALIFGAQKINLHQQEMEFE-PKASRPTPGSADLCF   91 (152)
T ss_dssp             ---CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT----TEEEEEETTEEEEEEETTBCCS-SCCSSCCTTCCEEEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC----CeEEEEeCCeEEEEeccCCcCC-CcCcCCCCCccEEEE
Confidence            56889999999999999999999999999999988743    4566777777888877654311 111123457789999


Q ss_pred             EeC-CHHHHHHHHHHcCCeEEeeeeeeC-C-eeEEEEEEECCCCCEEEEEeeCC
Q 030972           87 QCE-SVGNVEKFLKEMGIKYVRALVEEG-G-ILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        87 ~v~-dl~~~~~~l~~~g~~~~~~~~~~~-g-~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .++ |+++++++|+++|+++...+.... + ...+.+||.|||||.|||++...
T Consensus        92 ~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           92 ITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             EESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             EecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            987 999999999999999887664432 2 23478999999999999999754

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.90  E-value=6.2e-23  Score=136.91  Aligned_cols=124  Identities=15%  Similarity=0.213  Sum_probs=93.7

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccC---CCCCcceeEEecCCcEEEEeecCCCCCCCCC-CCCCCCceEEE
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRP---GSFNFDGAWLFGHGIGIHLLQSENPDSLPKK-SVINPKDNHLS   85 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~hl~   85 (168)
                      ++++++||+|.|+|++++++||+ +|||+...+.   ........|+..++..+++++.......... .....+.+|++
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hia   82 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHIC   82 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEE
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEE
Confidence            35789999999999999999999 9999987643   1223345667777788999886554221100 01145778999


Q ss_pred             EEeCCHHHHHHHHHHcCCeEEeeeeeeC-CeeEEEEEEECCCCCEEEEEe
Q 030972           86 FQCESVGNVEKFLKEMGIKYVRALVEEG-GILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        86 ~~v~dl~~~~~~l~~~g~~~~~~~~~~~-g~~~~~~~~~DPdG~~iel~~  134 (168)
                      |.|+|+++++++|+++|+++...|.... ..+.+.+||+|||||.|||++
T Consensus        83 f~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e  132 (133)
T 3hdp_A           83 YEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLE  132 (133)
T ss_dssp             EEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEE
T ss_pred             EEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEec
Confidence            9999999999999999999987654322 124577999999999999997

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.90  E-value=1.3e-22  Score=138.01  Aligned_cols=124  Identities=19%  Similarity=0.321  Sum_probs=94.8

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      ++|++.+|+||.|.|+|++++++||+++|||++....+    ...++..++..+.+........ +.......+..|++|
T Consensus        21 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~~l~~g~~~l~l~~~~~~~~-~~~~~~~~g~~~~~~   95 (147)
T 3zw5_A           21 QSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE----DRKALCFGDQKFNLHEVGKEFE-PKAAHPVPGSLDICL   95 (147)
T ss_dssp             HHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----TEEEEEETTEEEEEEETTSCCS-SCCSSCCTTCCEEEE
T ss_pred             cceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC----CceEEEECCcEEEEEEcCCCcC-cccCCCCCCCceEEE
Confidence            45778999999999999999999999999999986543    3455666777777776543321 111123446789999


Q ss_pred             EeC-CHHHHHHHHHHcCCeEEeeeeeeCC--eeEEEEEEECCCCCEEEEEee
Q 030972           87 QCE-SVGNVEKFLKEMGIKYVRALVEEGG--ILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        87 ~v~-dl~~~~~~l~~~g~~~~~~~~~~~g--~~~~~~~~~DPdG~~iel~~~  135 (168)
                      .+. |+++++++|+++|+++...+....+  ...+.+||.|||||.|||+++
T Consensus        96 ~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           96 ITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             ECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            886 9999999999999998766644322  234679999999999999974

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.89  E-value=1.8e-22  Score=132.92  Aligned_cols=124  Identities=26%  Similarity=0.341  Sum_probs=91.6

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      |++.+++|+.|.|+|++++++||+++|||+......  ......+++..++..++|+........+. .....+..|++|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~~g~~~~~~   79 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPS-YPEALGLRHLAF   79 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCC-SSCCSSCCCEEE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCC-CCCCccceEEEE
Confidence            567899999999999999999999999999875421  11112244555666788887544322221 123457789999


Q ss_pred             EeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           87 QCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        87 ~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      .|+|+++++++|+++|+++...+.... .+.+.+||.|||||.|||++
T Consensus        80 ~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           80 KVEHIEEVIAFLNEQGIETEPLRVDDF-TGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ECSCHHHHHHHHHHTTCCCCCCEECTT-TCCEEEEEECTTCCEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCC-CCcEEEEEECCCCCEEEeeC
Confidence            999999999999999999876554322 23467999999999999975

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.89  E-value=5.4e-22  Score=134.23  Aligned_cols=115  Identities=23%  Similarity=0.407  Sum_probs=86.9

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC--CcEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH--GIGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      .+|++.+|+||.|.|+|++++++||+++|||+........  ...++..+  +..+.+.+...          ..+..|+
T Consensus        22 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~~l~l~~~~~----------~~~~~h~   89 (141)
T 3ghj_A           22 VPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSAR--RWNFLWVSGRAGMVVLQEEKE----------NWQQQHF   89 (141)
T ss_dssp             ----CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTT--TEEEEEETTTTEEEEEEECCS----------SCCCCEE
T ss_pred             CceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCC--cEEEEEecCCCcEEEEeccCC----------CCCCceE
Confidence            4578899999999999999999999999999998764321  34455444  35677766522          2356899


Q ss_pred             EEEeC--CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           85 SFQCE--SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        85 ~~~v~--dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +|.|+  |+++++++|+++|+++..+..... ...+.+||.|||||.|||++
T Consensus        90 ~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           90 SFRVEKSEIEPLKKALESKGVSVHGPVNQEW-MQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EEEECGGGHHHHHHHHHHTTCCCEEEEEEGG-GTEEEEEEECTTCCEEEEEE
T ss_pred             EEEEeHHHHHHHHHHHHHCCCeEeCCcccCC-CCceEEEEECCCCCEEEEEE
Confidence            99997  999999999999999884333222 23477999999999999986

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.88  E-value=1.5e-21  Score=129.11  Aligned_cols=117  Identities=21%  Similarity=0.350  Sum_probs=92.5

Q ss_pred             CccceeeeEEEEe--CCHHHHHHHHHHccCCeeeccCCCC-CcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEE
Q 030972            9 LHLKSVNHVSLVC--RNISESIDFYQNVLGFVPIRRPGSF-NFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLS   85 (168)
Q Consensus         9 ~~~~~l~hv~l~v--~D~~~a~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   85 (168)
                      |++.+++|+.|.|  +|++++++||+++|||+...+.... .....|+..++..+++......        ...+..|++
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--------~~~~~~~~~   77 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQNF--------NPAKRAHPA   77 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCCEEEEETTEEEEEEECTTC--------CCCSSSCEE
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCceEEEeCCEEEEEEecCCC--------CCCCceEEE
Confidence            5688999999999  8999999999999999988754211 1234677777777777663221        124678999


Q ss_pred             EEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           86 FQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        86 ~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |.|+|+++++++|+++|+++...+. ..|  .+.+||.|||||.|||++..
T Consensus        78 f~v~d~~~~~~~l~~~G~~~~~~~~-~~g--~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           78 FYVLKIDEFKQELIKQGIEVIDDHA-RPD--VIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEETTHHHHHHHHHHTTCCCEEECS-STT--EEEEEEECTTSCEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCCccCCCC-CCC--eeEEEEECCCCCEEEEEeCC
Confidence            9999999999999999999887653 233  46799999999999999864

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.88  E-value=2.6e-22  Score=133.23  Aligned_cols=125  Identities=18%  Similarity=0.244  Sum_probs=92.7

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCcEEEEeecCCCCCCCCC---CCCCCCceEE
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSENPDSLPKK---SVINPKDNHL   84 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~hl   84 (168)
                      ++.+++|++|.|+|++++++||+++|||+......  ..+...+++..++..++++...........   .....+..|+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi   81 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHI   81 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEE
Confidence            36899999999999999999999999999876432  122345677777888888876554221110   0124577999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEE--ECCCCCEEEEEe
Q 030972           85 SFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFF--HDPDGFMIEICD  134 (168)
Q Consensus        85 ~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~--~DPdG~~iel~~  134 (168)
                      +|.|+|+++++++|+++|+++...+......+.+.+|+  +|||||.|||++
T Consensus        82 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           82 CIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             EEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             EEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            99999999999999999999876543322222234555  899999999997

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.88  E-value=1.8e-22  Score=138.60  Aligned_cols=123  Identities=14%  Similarity=0.201  Sum_probs=83.9

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEe-cCC-cEEEEeecCCCCCCCCC---CCCCCCceEEEE
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF-GHG-IGIHLLQSENPDSLPKK---SVINPKDNHLSF   86 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~-~~~~l~~~~~~~~~~~~---~~~~~~~~hl~~   86 (168)
                      ++|+|+.|.|+|+++|++||+++|||++..+....+.....+. .++ ....+............   .....+..|++|
T Consensus        25 Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~l~f  104 (155)
T 4g6x_A           25 MRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPAASF  104 (155)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCSEEE
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCceEEEEeccCCCcceEEEeccCCCccccccccccccCCceEEEe
Confidence            4799999999999999999999999998764322221112222 111 12222221111111000   012346789999


Q ss_pred             EeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           87 QCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        87 ~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      .|+|+++++++|+++|+++..+|...++  .+.+||+|||||.|||++..
T Consensus       105 ~VdDvda~~~~l~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          105 AVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             eechhhhhhhHHhcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            9999999999999999999888776543  26699999999999999854

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.88  E-value=5.3e-22  Score=133.08  Aligned_cols=123  Identities=24%  Similarity=0.307  Sum_probs=91.2

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC--CcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF--NFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      |++++|+|+.|.|+|++++++||+++|||++.......  .+..+++. ++..+.|++......... .....+..|++|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~-~~~~~g~~h~~f   78 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDLF-DETRPGLDHLSF   78 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSCC-CTTSSEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccCC-CCCCCCcceEEE
Confidence            56889999999999999999999999999987654311  12233444 667788887654321111 122356789999


Q ss_pred             Ee---CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           87 QC---ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        87 ~v---~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      .|   +|+++++++|+++|+++...+ .. +.+ +.+||.|||||.|||++..
T Consensus        79 ~v~~~~d~~~~~~~l~~~G~~~~~~~-~~-~~g-~~~~~~DPdG~~iel~~~~  128 (136)
T 2rk0_A           79 SVESMTDLDVLEERLAKAGAAFTPTQ-EL-PFG-WILAFRDADNIALEAMLGR  128 (136)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCE-EE-TTE-EEEEEECTTCCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHHHHCCCcccCcc-cc-CCc-eEEEEECCCCCEEEEEEcC
Confidence            99   799999999999999986432 22 223 7799999999999999865

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.88  E-value=2e-21  Score=128.22  Aligned_cols=120  Identities=18%  Similarity=0.203  Sum_probs=91.2

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEec-CCcEEEEeecCCCCCCCCCCCCCCCceEEEEEe
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFG-HGIGIHLLQSENPDSLPKKSVINPKDNHLSFQC   88 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v   88 (168)
                      ++++|+.|.|+|++++++||+++|||+......  ..++...|+.. ++..++|+........+.  ....+..|++|.|
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~--~~~~g~~hi~~~v   79 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTT--GENLGWAHIAIST   79 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCCC--SSCSSCCCEEEEC
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCCC--cCCCceEEEEEEc
Confidence            368999999999999999999999999876522  12234455554 456788887664432221  2345779999999


Q ss_pred             CC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           89 ES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        89 ~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +|   +++++++|+++|+++...+.... .+.+.++|.|||||.|||++
T Consensus        80 ~d~~~v~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~  127 (127)
T 3e5d_A           80 GTKEAVDELTEKLRQDGFAIAGEPRMTG-DGYYESVVLDPEGNRIEITW  127 (127)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECT-TSCEEEEEECTTSCEEEEEC
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCcccCC-CCcEEEEEECCCCCEEEEeC
Confidence            98   88999999999999987765433 34467999999999999974

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.87  E-value=9e-21  Score=126.34  Aligned_cols=120  Identities=22%  Similarity=0.319  Sum_probs=89.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecC----CcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGH----GIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      +++|+.|.|+|++++++||+++|||++.....  ...+..+++..+    +..+++.........    ....+..|++|
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~----~~~~~~~~~~~   77 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY----ELGTAYGHIAL   77 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCC----CCCSSEEEEEE
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcc----cCCCCccEEEE
Confidence            68999999999999999999999999876532  122234555544    356777654332111    12346789999


Q ss_pred             EeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           87 QCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        87 ~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      .|+|+++++++|+++|+++...+........+.++|.|||||.|||++..
T Consensus        78 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           78 SVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             EeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecC
Confidence            99999999999999999998776554321235689999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.87  E-value=1.6e-20  Score=125.35  Aligned_cols=114  Identities=14%  Similarity=0.174  Sum_probs=89.2

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEe-cCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF-GHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      +.+++|+.|.|+|++++++||+++|||+.....+    ..+.+. .++..+.++....+..     ....+..|++|.|+
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~-----~~~~~~~~~~~~v~   81 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVAFPSSGDALFAIWSGGEEPV-----AEIPRFSEIGIMLP   81 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEEEECSTTCEEEEESSSCCCC-----TTSCCCEEEEEEES
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEEEEcCCCcEEEEEeCCCCCc-----CCCCCcceEEEEeC
Confidence            4689999999999999999999999999876543    223343 3456778776552211     22356789999998


Q ss_pred             C---HHHHHHHHHH---cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           90 S---VGNVEKFLKE---MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        90 d---l~~~~~~l~~---~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      |   +++++++|++   +|+++..++.... ++ +.++|.|||||.|||.+.
T Consensus        82 ~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~-~g-~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           82 TGEDVDKLFNEWTKQKSHQIIVIKEPYTDV-FG-RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SHHHHHHHHHHHHHCSSSCCEEEEEEEEET-TE-EEEEEECTTCCEEEEEEC
T ss_pred             CHHHHHHHHHHHHhhhcCCCEEeeCCcccC-ce-EEEEEECCCCCEEEEEeC
Confidence            6   9999999999   9999987776553 33 779999999999999985

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.87  E-value=1.6e-21  Score=134.03  Aligned_cols=126  Identities=17%  Similarity=0.197  Sum_probs=95.4

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC----------------CCCcceeEEecCCcEEEEeecCCCCC
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG----------------SFNFDGAWLFGHGIGIHLLQSENPDS   70 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~~~~~~~   70 (168)
                      ....+++|+||+|.|+|++++++||+++|||+...+..                ......+++..++..++|++......
T Consensus        13 ~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~~   92 (159)
T 3gm5_A           13 NILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENPS   92 (159)
T ss_dssp             SCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSSC
T ss_pred             cccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCCC
Confidence            34567899999999999999999999999999764321                12234466677788899988754321


Q ss_pred             CCCC--CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCC--CCEEEEEee
Q 030972           71 LPKK--SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPD--GFMIEICDC  135 (168)
Q Consensus        71 ~~~~--~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPd--G~~iel~~~  135 (168)
                      ....  .....|.+|++|.|+|+++++++|+++|+++...+. ..|  .+.+||.|||  |+.|||++.
T Consensus        93 ~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~~g--~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           93 TWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-FEG--GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-ETT--EEEEEESCHHHHSSEEEEEEE
T ss_pred             hhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-cCC--eeEEEEeccccCcEEEEEEec
Confidence            1000  012457899999999999999999999999976653 233  4679999999  999999985

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.87  E-value=2.8e-21  Score=128.40  Aligned_cols=123  Identities=17%  Similarity=0.194  Sum_probs=89.5

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC-CCcceeEEec--CCcEEEEeecCCCCCCCCCCCCCCCceE
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS-FNFDGAWLFG--HGIGIHLLQSENPDSLPKKSVINPKDNH   83 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (168)
                      +++++++++|+.|.|+|++++++||+++|||+....... .+...+.+..  +...+.+.........    ....+..|
T Consensus         7 ~~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~----~~~~~~~~   82 (133)
T 4hc5_A            7 GSLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPSWYEDG----RKPGGYTG   82 (133)
T ss_dssp             -CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEECTTCSCEEEEECGGGCSSC----CCSCEEEE
T ss_pred             ccccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCCceEEEEECCCCceEEEEecCcccccc----cCCCCeEE
Confidence            345678999999999999999999999999998875321 1111122222  2346777665431110    11246789


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           84 LSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        84 l~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      ++|.|+|+++++++|+++|+++..++.... ++.+.++|.||+||.|||++
T Consensus        83 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           83 ISLITRDIDEAYKTLTERGVTFTKPPEMMP-WGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEEEESCHHHHHHHHHHTTCEESSSCEECT-TSCEEEEEECTTCEEEEEEE
T ss_pred             EEEEeCCHHHHHHHHHHCCCEeecCCCcCC-CCCEEEEEECCCCCEEEEEe
Confidence            999999999999999999999987665543 23377999999999999987

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.87  E-value=2.9e-22  Score=138.40  Aligned_cols=128  Identities=18%  Similarity=0.245  Sum_probs=95.2

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCcEEEEeecCCCCCCCCC--CCCCCCceEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSENPDSLPKK--SVINPKDNHL   84 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hl   84 (168)
                      +++.+|+||+|.|+|++++++||+++|||+......  ......+++..++..++|++..........  ...+.+..|+
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hi   83 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHI   83 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEE
Confidence            346899999999999999999999999999876432  122345667777788888887654311100  0123578999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEEee-eeeeCCeeEEEEEE--ECCCCCEEEEEeeCC
Q 030972           85 SFQCESVGNVEKFLKEMGIKYVRA-LVEEGGILVEQLFF--HDPDGFMIEICDCDN  137 (168)
Q Consensus        85 ~~~v~dl~~~~~~l~~~g~~~~~~-~~~~~g~~~~~~~~--~DPdG~~iel~~~~~  137 (168)
                      +|.|+|+++++++|+++|+++... +.... .+.+.+|+  +|||||.|||++...
T Consensus        84 af~V~Did~~~~~l~~~G~~~~~~~~~~~~-~g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           84 AIGVKSIEERIQEVKENGVQMINDEPVPGA-RGAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEECSCHHHHHHHHHHTTCCBSCSSCEECG-GGCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             EEEECCHHHHHHHHHHCCCEecccCcccCC-CCcEEEEEeccCCCeEEEEEEecCC
Confidence            999999999999999999998766 43322 23345666  499999999999765

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.87  E-value=7.2e-21  Score=129.82  Aligned_cols=120  Identities=22%  Similarity=0.235  Sum_probs=87.8

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEec-CCcEEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFG-HGIGIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      +++.+++|+.|.|+|++++++||+++|||++....+    ..+++.. ++..+.++.........   ....+..|++|.
T Consensus         2 ~m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~~~~~~~g~~l~l~~~~~~~~~~---~~~~~~~~l~f~   74 (148)
T 3rhe_A            2 VMLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----TFAMFVMKTGLRLGLWAQEEIEPKA---HQTGGGMELSFQ   74 (148)
T ss_dssp             -----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----SEEEEECTTSCEEEEEEGGGCSSCC---C----CEEEEEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----CEEEEEcCCCcEEEEecCCcCCccc---cCCCCeEEEEEE
Confidence            346789999999999999999999999999877643    3445554 56677776654321111   123467899999


Q ss_pred             eCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           88 CES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        88 v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |+|   +++++++|+++|+++..++..... + +.++|.|||||.|||++...
T Consensus        75 v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~-G-~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           75 VNSNEMVDEIHRQWSDKEISIIQPPTQMDF-G-YTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCEEEEEEEETT-E-EEEEEECTTCCEEEEEEEC-
T ss_pred             cCCHHHHHHHHHHHHhCCCEEEeCCeecCC-C-cEEEEECCCCCEEEEEEcCh
Confidence            987   999999999999999877665542 3 77999999999999999754

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.87  E-value=7.4e-22  Score=136.23  Aligned_cols=130  Identities=12%  Similarity=0.133  Sum_probs=95.6

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCC----CCCCCCCCCCceE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS----LPKKSVINPKDNH   83 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~h   83 (168)
                      ||++.+++||.|.|+|++++++||+++|||++......   ..+|+..++..+.++.......    .........+..|
T Consensus         3 m~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~h   79 (160)
T 3r4q_A            3 MKPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG---QLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQGH   79 (160)
T ss_dssp             -CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT---TEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEECE
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC---cEEEEeCCCEEEEEEecCCccCccccCCCCcCCCcceeE
Confidence            56789999999999999999999999999999876432   4566666776666665433211    0111122345699


Q ss_pred             EEEEe---CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCCCCCCC
Q 030972           84 LSFQC---ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVP  142 (168)
Q Consensus        84 l~~~v---~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~~~~~p  142 (168)
                      ++|.|   +|+++++++|+++|+++...+....  +.+.+||.|||||.|||++....+..+
T Consensus        80 i~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~--g~~~~~~~DPdG~~iel~~~~~~~~d~  139 (160)
T 3r4q_A           80 FCFYADDKAEVDEWKTRFEALEIPVEHYHRWPN--GSYSVYIRDPAGNSVEVGEGKLWGFEA  139 (160)
T ss_dssp             EEEEESSHHHHHHHHHHHHTTTCCCCEEEECTT--SCEEEEEECTTCCEEEEEEGGGGTCCC
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCEEeccccccC--CcEEEEEECCCCCEEEEEeCCCCCccc
Confidence            99999   7999999999999999875443222  346799999999999999976544333

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.86  E-value=2.9e-20  Score=124.25  Aligned_cols=120  Identities=24%  Similarity=0.284  Sum_probs=89.9

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEe
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQC   88 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v   88 (168)
                      ....+|+||.|.|+|++++++||+++|||+......    ..+.+..++..+.+....... .+    ...+..|++|.+
T Consensus         5 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~g~~~~l~~~~~~~-~~----~~~~~~h~~~~~   75 (135)
T 3rri_A            5 RNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DRITLDFFGDQLVCHLSDRWD-RE----VSMYPRHFGITF   75 (135)
T ss_dssp             CCTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TEEEEEETTEEEEEEECSCSC-SS----CCSSSCEEEEEC
T ss_pred             cCCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----CcEEEEEeCCEEEEEEcCccc-cc----CCCCCCeEEEEE
Confidence            334689999999999999999999999999966543    234444455556665544321 11    234568999998


Q ss_pred             C---CHHHHHHHHHHcCCeEEeeeeee-CC--eeEEEEEEECCCCCEEEEEeeCC
Q 030972           89 E---SVGNVEKFLKEMGIKYVRALVEE-GG--ILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        89 ~---dl~~~~~~l~~~g~~~~~~~~~~-~g--~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .   |+++++++|+++|+++..++... .+  ...+.+||+|||||.|||+++.+
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            5   59999999999999998777653 22  24577999999999999999865

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.86  E-value=1.9e-20  Score=127.25  Aligned_cols=126  Identities=18%  Similarity=0.265  Sum_probs=91.9

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC-------------CCCcceeEEecC-C-cEEEEeecCCCCCCCC
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG-------------SFNFDGAWLFGH-G-IGIHLLQSENPDSLPK   73 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-------------~~~~~~~~~~~~-~-~~~~l~~~~~~~~~~~   73 (168)
                      +++.+++|+.|.|+|++++++||++ |||+......             ......+++..+ + ..++|++...+.....
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~   85 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   85 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCccc
Confidence            3578999999999999999999999 9999875421             012234455543 2 5787877533322110


Q ss_pred             ---CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           74 ---KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        74 ---~~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                         ......+..|++|.|+|+++++++|+++|+++...+...+ ++.+.+||.|||||.|||++..
T Consensus        86 ~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           86 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE-NSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEET-TTEEEEEEECGGGCEEEEEEEC
T ss_pred             ccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccC-CceEEEEEECCCCCEEEEEecc
Confidence               1122346679999999999999999999999987765443 3456799999999999999864

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.86  E-value=2.1e-20  Score=126.01  Aligned_cols=116  Identities=22%  Similarity=0.360  Sum_probs=90.9

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      |+++++|+.|.|+|++++++||+++|||+......    ...|+..++..+.+.......  +. .....+..|++|.|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~--~~-~~~~~~~~hi~~~v~   73 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TGAYLTCGDLWVCLSYDEARQ--YV-PPQESDYTHYAFTVA   73 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TEEEEEETTEEEEEEECTTCC--CC-CGGGSCSCEEEEECC
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC----CcEEEEECCEEEEEEECCCCC--CC-CCCCCCceEEEEEeC
Confidence            36789999999999999999999999999887543    346677777777777654321  11 122356789999996


Q ss_pred             --CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           90 --SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        90 --dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                        |+++++++|+++|+++...+..  +  .+.++|.|||||.|||++..
T Consensus        74 ~~d~~~~~~~l~~~G~~~~~~~~~--~--~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           74 EEDFEPLSQRLEQAGVTIWKQNKS--E--GASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECCCS--S--SEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHCCCeEeccCCC--c--eeEEEEECCCCCEEEEEECc
Confidence              9999999999999998775532  2  26699999999999999853

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.86  E-value=1.8e-20  Score=124.91  Aligned_cols=118  Identities=19%  Similarity=0.388  Sum_probs=88.0

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcc---eeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFD---GAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      |+.+++|+.|.|+|++++++||+++|||+.........+.   ..++..++..+.+......        ...+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--------~~~~~~h~~~   72 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSL--------QERTYNHIAF   72 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSC--------CCCCSCEEEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCC--------CCCCeeEEEE
Confidence            3678999999999999999999999999987654321110   1256666667777654321        1346789999


Q ss_pred             EeC--CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           87 QCE--SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        87 ~v~--dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      .|+  |+++++++|+++|+++...+....+ ..+.+||.|||||.|||++..
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           73 QIQSEEVDEYTERIKALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSS
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCC
Confidence            994  9999999999999999877654322 235699999999999999864

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.86  E-value=2.2e-20  Score=126.34  Aligned_cols=119  Identities=18%  Similarity=0.211  Sum_probs=88.2

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCC----cEEEEeecCCCCCCCCCCCCCCCc
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHG----IGIHLLQSENPDSLPKKSVINPKD   81 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~   81 (168)
                      +|++.+++|+.|.|+|++++++||+++|||+......  ...+..+++..++    ..++|+........    ....+.
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~----~~~~~~   78 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSY----KHDEAY   78 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCC----CCCSSE
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCC----CCCCCc
Confidence            5778999999999999999999999999999876432  1122335665553    57888776542111    123467


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           82 NHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        82 ~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      .|++|.|+|+++++++|+++|+++...    .|.. ..+||.|||||.|||++.
T Consensus        79 ~h~~f~v~d~~~~~~~l~~~G~~~~~~----~g~~-~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           79 GHIAIGVEDVKELVADMRKHDVPIDYE----DESG-FMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEE----CSSS-SEEEEECTTSCEEEEEEH
T ss_pred             eEEEEEeCCHHHHHHHHHHCCCEEecc----CCcE-EEEEEECCCCCEEEEEEc
Confidence            899999999999999999999998765    3322 224999999999999985

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.86  E-value=4.1e-20  Score=123.02  Aligned_cols=117  Identities=16%  Similarity=0.215  Sum_probs=84.2

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEe-cCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF-GHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      ...|+||.|.|+|++++++||++ |||+........ ...+++. .++..+.+...... .     ....+..|++|.|+
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~-~~~~~~~~~~~~~l~l~~~~~~-~-----~~~~~~~~l~f~v~   75 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKVDK-GSEVHRAVHNGVEFSLYSIQNP-Q-----RSQIPSLQLGFQIT   75 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CCEEEEEETTEEEEEEECCCC-S-----SCCCCSEEEEEEES
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCCC-CCEEEEEeCCCeEEEEEECCCC-c-----CCCCCceEEEEEeC
Confidence            45899999999999999999999 999987752211 1223444 46666777543321 1     12235578999999


Q ss_pred             CHHHHHHHHHHcCCe-EEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           90 SVGNVEKFLKEMGIK-YVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        90 dl~~~~~~l~~~g~~-~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |+++++++|+++|++ +..++...+ ++.+ ++|+|||||.|||.+.+.
T Consensus        76 dvd~~~~~l~~~G~~~~~~~p~~~~-~G~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           76 DLEKTVQELVKIPGAMCILDPTDMP-DGKK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             CHHHHHHHHTTSTTCEEEEEEEECC--CEE-EEEECTTCCEEEEEC---
T ss_pred             CHHHHHHHHHHCCCceeccCceeCC-CccE-EEEECCCCCEEEEEEecc
Confidence            999999999999999 776665443 3445 999999999999999764

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.86  E-value=7.1e-21  Score=128.08  Aligned_cols=116  Identities=14%  Similarity=0.285  Sum_probs=87.4

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcc---eeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFD---GAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      +++|+|+.|.|+|++++++||+++|||+.........+.   ..++..++..+.++.....   +     ..+..|++|.
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~---~-----~~~~~h~~~~   73 (139)
T 1r9c_A            2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL---A-----ERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCC---S-----SCCSCEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCC---C-----CCCeeEEEEE
Confidence            679999999999999999999999999987653311111   1156667777777764321   1     3467999999


Q ss_pred             eC--CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           88 CE--SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        88 v~--dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      |+  |+++++++|+++|+++...+.... .+.+.+||.|||||.|||++.
T Consensus        74 v~~~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           74 IDDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             CCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             cCHHHHHHHHHHHHHCCCcccCCcccCC-CCeEEEEEECCCCCEEEEEeC
Confidence            99  999999999999999876644332 233669999999999999974

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.86  E-value=1.9e-20  Score=122.40  Aligned_cols=114  Identities=17%  Similarity=0.171  Sum_probs=84.6

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCH
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESV   91 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl   91 (168)
                      ++++|+.|.|+|++++++||+++|||+.....+    ..+++..++..+.+....   ..+.  .......|++|.|+|+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~l~l~~~~---~~~~--~~~~~~~~~~~~v~d~   74 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFAQFTIGSHCLMLSQNH---LVPL--ENFQSGIIIHIEVEDV   74 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEEEEEETTEEEEEESSC---SSSC--CCCCSCEEEEEECSCH
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----CEEEEEeCCeEEEEEcCC---CCCc--ccCCCeEEEEEEECCH
Confidence            479999999999999999999999999875432    234555566555443211   1111  1112346899999999


Q ss_pred             HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           92 GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        92 ~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      ++++++|+++|+++..++.... ++.+.++|+|||||.|||++.
T Consensus        75 ~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           75 DQNYKRLNELGIKVLHGPTVTD-WGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             HHHHHHHHHHTCCEEEEEEECT-TSCEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHHHCCCceecCCcccc-CccEEEEEECCCccEEEEEec
Confidence            9999999999999877765443 234668999999999999974

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.85  E-value=2.9e-20  Score=124.49  Aligned_cols=111  Identities=24%  Similarity=0.390  Sum_probs=89.0

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC-
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE-   89 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-   89 (168)
                      +++++|+.|.|+|++++++||+++|||+......    ...|+..++..+.+......      .....+..|++|.|+ 
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~------~~~~~~~~h~~~~v~~   71 (135)
T 1nki_A            2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD----QGAYLELGSLWLCLSREPQY------GGPAADYTHYAFGIAA   71 (135)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEEETTEEEEEEECTTC------CCCCSSSCEEEEEECH
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC----CceEEecCCEEEEEEeCCCC------CCCCCCcceEEEEccH
Confidence            6799999999999999999999999999886533    34567777777777765321      122346789999997 


Q ss_pred             -CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           90 -SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        90 -dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                       |+++++++|+++|+++...+.. .+   +.++|.|||||.|||++.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~-~~---~~~~~~DPdG~~iel~~~  114 (135)
T 1nki_A           72 ADFARFAAQLRAHGVREWKQNRS-EG---DSFYFLDPDGHRLEAHVG  114 (135)
T ss_dssp             HHHHHHHHHHHHTTCCEEECCCS-SS---CEEEEECTTCCEEEEESC
T ss_pred             HHHHHHHHHHHHCCCceecCCCC-Ce---EEEEEECCCCCEEEEEEC
Confidence             9999999999999998776532 22   569999999999999975

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.85  E-value=2.4e-20  Score=127.14  Aligned_cols=122  Identities=19%  Similarity=0.225  Sum_probs=92.5

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCC---CCCCCCCCCCCceEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPD---SLPKKSVINPKDNHLS   85 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~hl~   85 (168)
                      |++.+++|+.|.|+|++++++||+++|||++....+    ..+++..++..+.|+......   ..+.  ....+..|++
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~~l~   74 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP----EIIFYQMNGFVLATWLVQNLQEDVGVAV--TSRPGSMALA   74 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS----SEEEEECSSSEEEEEEHHHHHHHHSSCC--CSSCCSCEEE
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC----CEEEEEcCCEEEEEEeccccccccCCCC--CCCCCeEEEE
Confidence            456789999999999999999999999999876542    345666677788887653210   0010  1134678999


Q ss_pred             EEe---CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           86 FQC---ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        86 ~~v---~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |.|   +|+++++++|+++|+++..++.... ++.+.+||+|||||.|||++...
T Consensus        75 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           75 HNVRAETEVAPLMERLVAAGGQLLRPADAPP-HGGLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             EECSSGGGHHHHHHHHHHTTCEEEEEEECCT-TSSEEEEEECTTCCEEEEEECTT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCEEecCCcccC-CCCEEEEEECCCCCEEEEEeCCC
Confidence            999   7999999999999999987765443 22367999999999999998743

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.85  E-value=2.2e-20  Score=126.85  Aligned_cols=118  Identities=15%  Similarity=0.219  Sum_probs=86.6

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEe
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQC   88 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v   88 (168)
                      |+++++. +.|.|+|++++++||+++|||+...+....+........++  ++++......      ....+..|++|.|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~------~~~~~~~hl~f~V   73 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIST--ILLIAGSEEA------LKPFRNTQATFLV   73 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEETT--EEEEESCHHH------HGGGGGCCEEEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEecc--EEEecCCccc------CCCCcceEEEEEe
Confidence            6678887 99999999999999999999998765432111112222232  4555432110      0112458999999


Q ss_pred             CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           89 ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        89 ~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +|+++++++|+++|+++..++...+. + +.++|.|||||.|||++...
T Consensus        74 ~d~d~~~~~l~~~G~~v~~~p~~~~~-G-~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           74 DSLDKFKTFLEENGAEIIRGPSKVPT-G-RNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETT-E-EEEEEECTTSCEEEEEEECC
T ss_pred             CCHHHHHHHHHHcCCEEecCCccCCC-c-eEEEEECCCCCEEEEEEcCC
Confidence            99999999999999999877765542 3 67999999999999999754

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.85  E-value=8.4e-21  Score=124.15  Aligned_cols=113  Identities=18%  Similarity=0.230  Sum_probs=84.1

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC---CcEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH---GIGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      .|.++++ |+.|.|+|++++++||+++||++.....+    ..+++..+   +..+.+.....         ...+..|+
T Consensus         3 ~m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~l~l~~~~~---------~~~~~~~~   68 (119)
T 2pjs_A            3 HMAVRRV-VANIATPEPARAQAFYGDILGMPVAMDHG----WIVTHASPLEAHAQVSFAREGG---------SGTDVPDL   68 (119)
T ss_dssp             --CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEEEEEEEEEEEEEEEEESSSB---------TTBCCCSE
T ss_pred             ccceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecCC----EEEEEecCCCCcEEEEEEcCCC---------CCCceeEE
Confidence            4678899 99999999999999999999999877532    23334333   22344443211         12356899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           85 SFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        85 ~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +|.|+|+++++++|+++|+++..++...+ ++.+.++|.|||||.|||++.
T Consensus        69 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           69 SIEVDNFDEVHARILKAGLPIEYGPVTEA-WGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EEEESCHHHHHHHHHHTTCCCSEEEEECT-TSCEEEEEECTTSCEEEEEEC
T ss_pred             EEEECCHHHHHHHHHHCCCccccCCccCC-CccEEEEEECCCCCEEEEEec
Confidence            99999999999999999999877665543 224679999999999999974

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.85  E-value=3.3e-20  Score=130.69  Aligned_cols=127  Identities=21%  Similarity=0.291  Sum_probs=91.1

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCC-------------------cEEEEeecCC
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHG-------------------IGIHLLQSEN   67 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~-------------------~~~~l~~~~~   67 (168)
                      ....+|+|++|.|+|++++++||+++|||+...+..  ...+..+++..++                   ..++|+....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            445789999999999999999999999999877532  2223344444332                   4677754433


Q ss_pred             CCCCC-----CCCCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           68 PDSLP-----KKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        68 ~~~~~-----~~~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .....     .......+..|++|.|+|+++++++|+++|+++...+......  ..+||+|||||.|||++...
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~--~~~~~~DPdG~~iel~~~~~  182 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMK--GLAFIQDPDGYWIEILNPNK  182 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSST--TCEEEECTTCCEEEEECGGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcc--eEEEEECCCCCEEEEEEccc
Confidence            21111     1112234778999999999999999999999998766433221  24899999999999998653

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.85  E-value=9.1e-21  Score=128.22  Aligned_cols=126  Identities=17%  Similarity=0.294  Sum_probs=90.7

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCC------cEEEEeecCCCCCCCCC--CCCC-
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHG------IGIHLLQSENPDSLPKK--SVIN-   78 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~~--~~~~-   78 (168)
                      ++.+++|+.|.|+|++++++||+++|||+......  ..+...+++..++      ..++|++..........  .... 
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~   85 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNG   85 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTT
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCC
Confidence            46799999999999999999999999999876432  1122345666655      67888876543211000  0112 


Q ss_pred             -CCceEEEEEeCCHHHHHHHHHHcCCeEE-eeeeeeCCeeEEEEEE--ECCCCCEEEEEeeC
Q 030972           79 -PKDNHLSFQCESVGNVEKFLKEMGIKYV-RALVEEGGILVEQLFF--HDPDGFMIEICDCD  136 (168)
Q Consensus        79 -~~~~hl~~~v~dl~~~~~~l~~~g~~~~-~~~~~~~g~~~~~~~~--~DPdG~~iel~~~~  136 (168)
                       .+..|++|.|+|+++++++|+++|+++. ..+.... .+.+.+|+  +|||||.|||++..
T Consensus        86 ~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~-~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           86 RAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGT-GGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECS-SSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCC-CceEEEEEeecCCCcEEEEEEecC
Confidence             4678999999999999999999999987 3343322 22344666  89999999999853

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.84  E-value=1.4e-19  Score=119.49  Aligned_cols=111  Identities=14%  Similarity=0.255  Sum_probs=86.8

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCH
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESV   91 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl   91 (168)
                      ....|+.|.|+|++++++||+++|||+......    ..+++..++..+++......        ...+..|++|.|+|+
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~--------~~~~~~~~~~~v~dv   71 (124)
T 1xrk_A            4 LTSAVPVLTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRDDVTLFISAVQDQ--------VVPDNTQAWVWVRGL   71 (124)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEEETTEEEEEEECSCT--------TTGGGCEEEEEEECH
T ss_pred             ccceeEEEEcCCHHHHHHHHHHccCceEEecCC----CEEEEEECCEEEEEEcCCCC--------CCCCceEEEEEECCH
Confidence            355799999999999999999999999987632    23455566777777664321        112457999999999


Q ss_pred             HHHHHHHHHc------CC--eEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           92 GNVEKFLKEM------GI--KYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        92 ~~~~~~l~~~------g~--~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ++++++|+++      |+  ++..++...+ ++ +.++|.|||||.|||.+..
T Consensus        72 ~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           72 DELYAEWSEVVSTNFRDASGPAMTEIVEQP-WG-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHHTTTSBSCTTTCSSCEECCCEEET-TE-EEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHHHHhcccccCCccccccCCceecC-CC-CEEEEECCCCCEEEEEEec
Confidence            9999999999      99  8877665544 33 7899999999999999853

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.84  E-value=3.4e-19  Score=121.46  Aligned_cols=121  Identities=14%  Similarity=0.189  Sum_probs=86.3

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCC--CCCCCCCceEEEEEe
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPK--KSVINPKDNHLSFQC   88 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hl~~~v   88 (168)
                      ..+++|+.|.|+|++++++||+++|||++.....   ...+++..++..+.|...........  ......+ .|++|.|
T Consensus        23 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g-~~l~f~v   98 (148)
T 2r6u_A           23 TGRIVHFEIPFDDGDRARAFYRDAFGWAIAEIPD---MDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTT-PVVTVDV   98 (148)
T ss_dssp             CCCEEEEEEEESSHHHHHHHHHHHHCCEEEEETT---TTEEEEECSCBCTTSSBCSSSCBCEEEEESSSSCS-CEEEEEC
T ss_pred             CCceEEEEEEeCCHHHHHHHHHHccCcEEEECCC---CCEEEEEeCCcceeecccCCcccccceeecCCCCe-EEEEEEc
Confidence            3689999999999999999999999999877422   13455555554333332221110000  0000123 5999999


Q ss_pred             CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           89 ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        89 ~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +|+++++++|+++|+++..++....+++ +.+||.|||||.|||++..
T Consensus        99 ~dld~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           99 ESIESALERIESLGGKTVTGRTPVGNMG-FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETTTE-EEEEEECTTSCEEEEEEEC
T ss_pred             CCHHHHHHHHHHcCCeEecCCeecCCCE-EEEEEECCCCCEEEEEecC
Confidence            9999999999999999987766554333 7799999999999999864

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.84  E-value=2.2e-20  Score=127.01  Aligned_cols=123  Identities=22%  Similarity=0.280  Sum_probs=91.8

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHH---HHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCC-CCCCCCCCCCCCce
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFY---QNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENP-DSLPKKSVINPKDN   82 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY---~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~   82 (168)
                      ..+.+.+++|+.|.|+|++++++||   +++|||+.......   ...|+. ++..+.|++.... ...+.. ....+..
T Consensus        14 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~---~~~~~~-g~~~l~l~~~~~~~~~~~~~-~~~~g~~   88 (146)
T 3ct8_A           14 NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR---GKSYKH-GKTYLVFVQTEDRFQTPTFH-RKRTGLN   88 (146)
T ss_dssp             CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT---EEEEEE-TTEEEEEEECCGGGSCSCCC-TTSSSCC
T ss_pred             ccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC---CceEec-CCeEEEEEEcCCCccccccc-ccCCCce
Confidence            4567789999999999999999999   99999998775432   234665 6667888765431 011111 1234678


Q ss_pred             EEEEEeC---CHHHHHHHHHHcCCeEEee-eeee-CCeeEEEEEEECCCCCEEEEEe
Q 030972           83 HLSFQCE---SVGNVEKFLKEMGIKYVRA-LVEE-GGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        83 hl~~~v~---dl~~~~~~l~~~g~~~~~~-~~~~-~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      |++|.|+   |+++++++|+++|+++... +... .+.+.+.+||.|||||.|||++
T Consensus        89 hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           89 HLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            9999998   9999999999999998763 4322 2333467999999999999986

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.84  E-value=7.5e-20  Score=128.69  Aligned_cols=127  Identities=20%  Similarity=0.293  Sum_probs=90.3

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEec-------------------CCcEEEEeecCC
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFG-------------------HGIGIHLLQSEN   67 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~-------------------~~~~~~l~~~~~   67 (168)
                      +.+.+++|+.|.|+|++++++||+++|||+......  ...+..+++..                   ++..++|+....
T Consensus        27 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~  106 (184)
T 2za0_A           27 TKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWG  106 (184)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCC
Confidence            457799999999999999999999999999876432  11122233332                   235777776533


Q ss_pred             CCCCCC-----CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           68 PDSLPK-----KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        68 ~~~~~~-----~~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ....+.     ......+..|++|.|+|+++++++|+++|+++...+....+  .+.+||+|||||.|||++...
T Consensus       107 ~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~  179 (184)
T 2za0_A          107 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNK  179 (184)
T ss_dssp             GGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTT
T ss_pred             CCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCc
Confidence            111111     00112467899999999999999999999999876543222  235899999999999998654

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.83  E-value=1.1e-19  Score=123.56  Aligned_cols=126  Identities=15%  Similarity=0.124  Sum_probs=82.8

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCC---CCCCCCCCCCCceEE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPD---SLPKKSVINPKDNHL   84 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~hl   84 (168)
                      |....+|.||.|.|+|++++++||+++ |+......... ....+....+..+.+.......   ..........+..|+
T Consensus         4 m~~~~rl~~V~L~V~Dl~~s~~FY~~l-g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (149)
T 4gym_A            4 MASQSRLTFVNLPVADVAASQAFFGTL-GFEFNPKFTDE-SCACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIV   81 (149)
T ss_dssp             ---CCCCEEEEEEESCHHHHHHHHHHT-TCEECGGGCBT-TEEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEE
T ss_pred             CCCCccEEEEEEEeCCHHHHHHHHHHh-CCCcceeecCC-ceeEEeecCcceEeeeccccccccccccCCCCCCCCeeEE
Confidence            445678899999999999999999985 55444432211 1223333344444443321110   111111234466799


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           85 SFQCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        85 ~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +|.|+   ++++++++++++|+.+..++...++  .+.+||+|||||.|||++...
T Consensus        82 a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           82 CVSAIDRDDVDRFADTALGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEEECT
T ss_pred             EEEeccHHHHHHHHHHHHhcCceeeccccccCC--EEEEEEEcCCCCEEEEEEECh
Confidence            99996   5788899999999999888776543  377999999999999998753

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.83  E-value=4.4e-19  Score=119.50  Aligned_cols=119  Identities=21%  Similarity=0.150  Sum_probs=85.5

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCC----CCCCCCCCCCCCCceEEEEEe
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSEN----PDSLPKKSVINPKDNHLSFQC   88 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~hl~~~v   88 (168)
                      +++|+.|.|+|++++++||+++|||+........  ...++..++..+.+.....    ....+.. ....+ .|++|.|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~-~~~~~-~~~~f~v   83 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP--IFRGLDTGKSCIGFNAHEAYELMQLAQFSE-TSGIK-FLLNFDV   83 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT--TEEEEECSSSEEEEECTHHHHHTTCGGGCC-CBSCC-EEEEEEC
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC--ceEEeecCCEEEEEcCccccccccccccCC-CCCCe-EEEEEEc
Confidence            8999999999999999999999999987543211  2234555555666543210    0000000 11223 5999999


Q ss_pred             C---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           89 E---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        89 ~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +   |+++++++|+++|+++..++.... ++.+.+||+|||||.|||++..
T Consensus        84 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           84 DTKEAVDKLVPVAIAAGATLIKAPYETY-YHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEEEEECT-TSEEEEEEECTTSCEEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCccccC-CccEEEEEECCCCCEEEEEEcc
Confidence            9   599999999999999887766543 3357799999999999999864

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.83  E-value=2.9e-19  Score=120.01  Aligned_cols=119  Identities=17%  Similarity=0.159  Sum_probs=88.8

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEec-CCcEEEEeecCC-----CCCCCCCCCCCCCceEE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFG-HGIGIHLLQSEN-----PDSLPKKSVINPKDNHL   84 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~-----~~~~~~~~~~~~~~~hl   84 (168)
                      +++++|+.|.|+|++++++||++ |||++.......  ..+.+.. ++..+.+.....     +...+   ....+..|+
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~---~~~~~~~~l   75 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSA--PHTEAVLDGGIRLAWDTVETVRSYDPEWQA---PTGGHRFAI   75 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGGC--SEEEEECTTSCEEEEEEHHHHHHHCTTCCC---CBSSCSEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCCC--ceEEEEcCCCeEEEEecCccchhhCcccCC---CCCCCeEEE
Confidence            46899999999999999999998 999987654311  1233333 556777765321     11111   123567899


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           85 SFQCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        85 ~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +|.|+   |+++++++|+++|+++..++.... ++.+.+||.|||||.|||++..
T Consensus        76 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           76 AFEFPDTASVDKKYAELVDAGYEGHLKPWNAV-WGQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCEEEEEEEET-TTEEEEEEECTTCCEEEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCceeeCCcccC-CCcEEEEEECCCCCEEEEEeCC
Confidence            99999   999999999999999987765543 2356799999999999999865

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.83  E-value=1.6e-19  Score=122.52  Aligned_cols=116  Identities=16%  Similarity=0.222  Sum_probs=88.1

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC-CcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH-GIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      +++++|+.|.|+|++++++||+++|||++.....    ...++..+ +..+.|+........   .....+..|++|.|+
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~---~~~~~~~~hl~f~v~   95 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESSP----TFSLFVLANGMKLGLWSRHTVEPK---ASVTGGGGELAFRVE   95 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----TEEEEECTTSCEEEEEETTSCSSC---CCCSSSSCEEEEECS
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----CeEEEEcCCCcEEEEEeCCCCCCc---cCCCCCceEEEEEeC
Confidence            3489999999999999999999999999876542    23455544 467777654332111   112357789999997


Q ss_pred             ---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           90 ---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        90 ---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                         |+++++++|+++|+++...+..... + +.+||.|||||.|||++.
T Consensus        96 d~~dv~~~~~~l~~~G~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~  142 (144)
T 2kjz_A           96 NDAQVDETFAGWKASGVAMLQQPAKMEF-G-YTFTAADPDSHRLRVYAF  142 (144)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCSCCEEETT-E-EEEEECCTTCCEEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCeEecCceecCC-c-eEEEEECCCCCEEEEEec
Confidence               5899999999999998776655432 3 679999999999999985

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.83  E-value=1.5e-19  Score=119.09  Aligned_cols=113  Identities=12%  Similarity=0.137  Sum_probs=86.7

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      ||.++.+ ++.|.|+|++++++||+++|||+......    ..+++..++..+++......   +     ..+..|++|.
T Consensus         1 m~~~~~~-~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~---~-----~~~~~~~~~~   67 (122)
T 1qto_A            1 MVKFLGA-VPVLTAVDVPANVSFWVDTLGFEKDFGDR----DFAGVRRGDIRLHISRTEHQ---I-----VADNTSAWIE   67 (122)
T ss_dssp             CCCCCCC-CCEEEESSHHHHHHHHHHTTCCEEEEECS----SEEEEEETTEEEEEEECSCH---H-----HHTTCEEEEE
T ss_pred             CCcccce-eEEEEcCCHHHHHHHHHhccCcEEeeCCC----CEEEEEECCEEEEEEcCCCC---C-----CCCceEEEEE
Confidence            3444444 89999999999999999999999887532    34556667777777654321   0     1234799999


Q ss_pred             eCCHHHHHHHHHHc------CC--eEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           88 CESVGNVEKFLKEM------GI--KYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        88 v~dl~~~~~~l~~~------g~--~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      |+|+++++++|+++      |+  ++..++...+ ++ +.++|.|||||.|||.+.
T Consensus        68 v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           68 VTDPDALHEEWARAVSTDYADTSGPAMTPVGESP-AG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             ESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEET-TE-EEEEEECTTSCEEEEEEC
T ss_pred             ECCHHHHHHHHHhhccccccCccccccCCCcCCC-CC-cEEEEECCCCCEEEEecC
Confidence            99999999999999      99  8877665443 33 779999999999999984

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.82  E-value=7.4e-19  Score=116.29  Aligned_cols=111  Identities=16%  Similarity=0.181  Sum_probs=84.7

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHH
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGN   93 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~   93 (168)
                      ..++.|.|+|++++++||++ |||+......    ..+++..++..+++......       ....+..|++|.|+|+++
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~-------~~~~~~~~~~~~v~dv~~   71 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRGDLMLEFFAHPGL-------DPLASWFSCCLRLDDLAE   71 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEETTEEEEEEECTTC-------CGGGCCCEEEEEESCHHH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecCC----CEEEEEeCCEEEEEEeCCCC-------CCCCcceEEEEEECCHHH
Confidence            45899999999999999998 9999887632    34456667777777764331       112467899999999999


Q ss_pred             HHHHHHHcCCeE-------EeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           94 VEKFLKEMGIKY-------VRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        94 ~~~~l~~~g~~~-------~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++++|+++|+++       ...+...+ ++.+.++|.|||||.|||++...
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           72 FYRQCKSVGIQETSSGYPRIHAPELQG-WGGTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHTTCCBCSSSSSEEEEEEECT-TSSEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHCCCccccccCccccCCcccC-cccEEEEEECCCCCEEEEecchh
Confidence            999999999994       55554433 23366999999999999998653

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.81  E-value=8.1e-19  Score=117.41  Aligned_cols=113  Identities=17%  Similarity=0.181  Sum_probs=83.3

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHHHH
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVE   95 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~~~   95 (168)
                      +..|.|+|++++++||+++|||++.....    ..+++..++..+++.........+    ...+..|++|.|+|+++++
T Consensus        10 ~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~l~~~~~~l~l~~~~~~~~~~----~~~~~~~l~~~v~dv~~~~   81 (134)
T 3fcd_A           10 TPFLHIPDMQEALTLFCDTLGFELKYRHS----NYAYLELSGCGLRLLEEPARKIIP----DGIARVAICIDVSDIDSLH   81 (134)
T ss_dssp             EEEEEESCHHHHHHHHTTTTCCEEEEEET----TEEEEEETTEEEEEEECCCC-------------EEEEEECSCHHHHH
T ss_pred             eeEEEECCHHHHHHHHHhccCcEEEEeCC----CeEEEEECCEEEEEEeCCCCCcCC----CCCceEEEEEEeCCHHHHH
Confidence            67999999999999999999999987643    346666777788887765431111    1234579999999999999


Q ss_pred             HHHHHcCC----eEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           96 KFLKEMGI----KYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        96 ~~l~~~g~----~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++|+++|+    ++..++...+ ++.+.++|.|||||.|||.+...
T Consensus        82 ~~l~~~g~~~g~~i~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           82 TKLSPALENLPADQVEPLKNMP-YGQREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             HHHHHHHTTSCGGGEEEEEECT-TSEEEEEEECTTSCEEEEEEECC
T ss_pred             HHHHhcCCccCCccccCCcccC-CCcEEEEEECCCCCEEEEEEccc
Confidence            99997654    4444444433 34577999999999999999865

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.81  E-value=3e-18  Score=114.80  Aligned_cols=118  Identities=16%  Similarity=0.139  Sum_probs=86.6

Q ss_pred             eeEEEEeCCHHHHHHHHHHccCCeeeccCCC-CCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCce-EEEEEeCCHH
Q 030972           15 NHVSLVCRNISESIDFYQNVLGFVPIRRPGS-FNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDN-HLSFQCESVG   92 (168)
Q Consensus        15 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-hl~~~v~dl~   92 (168)
                      ..+.|.|+|++++++||+++|||+....... .......+..++..+.+.........  . ....... |++|.|+|++
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~g~~~~~~l~~~~~~l~l~~~~~~~~~--~-~~~~~~~~~~~~~v~dv~   80 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRHADLDTGGGIVMVRRTGEPYTV--S-CAGGHTCKQVIVWVSDVD   80 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSSSSCSEEEEECSSSEEEEEETTCCSSC--E-ECCCCCCCEEEEEESCHH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCCCcEEEEEEecCCeEEEEEecCCCcCc--c-CCCCCcEEEEEEEeCCHH
Confidence            3689999999999999999999999865321 11223444556677777654322111  1 1122334 9999999999


Q ss_pred             HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           93 NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        93 ~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +++++|+++|+++..++.... ++.+.++|.|||||.|||++..
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           81 EHFMRSTAAGADIVQPLQDKP-WGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             HHHHHHHHTTCEEEEEEEEET-TTEEEEEEECSSSCEEEEEECC
T ss_pred             HHHHHHHHcCCeeccCccccC-CCcEEEEEECCCCCEEEEEEEc
Confidence            999999999999987776544 3347799999999999999964

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.81  E-value=4.7e-19  Score=114.82  Aligned_cols=108  Identities=21%  Similarity=0.359  Sum_probs=82.6

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC-CcEEEEeecCCCCCCCCCCCCCCCceEEEEEe--
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH-GIGIHLLQSENPDSLPKKSVINPKDNHLSFQC--   88 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v--   88 (168)
                      ++++|+.|.|+|++++.+||+++|||+.....+.   ...++..+ +..+.+......   +     ..+..|++|.|  
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~~---~-----~~~~~~~~~~v~~   70 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN---AFAVMRDNDGFILTLMKGKEV---Q-----YPKTFHVGFPQES   70 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT---TEEEEECTTCCEEEEEECSSC---C-----CCTTCCEEEECSS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCCC---cEEEEEcCCCcEEEEEeCCCC---C-----CCceeEEEEEcCC
Confidence            3689999999999999999999999998765321   33555443 456777654321   1     24678999999  


Q ss_pred             -CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           89 -ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        89 -~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                       +|+++++++|+++|+++.. +.. .+  .+.++|.|||||.|||++
T Consensus        71 ~~d~~~~~~~l~~~G~~~~~-p~~-~~--~~~~~~~DPdG~~iel~~  113 (113)
T 1xqa_A           71 EEQVDKINQRLKEDGFLVEP-PKH-AH--AYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             HHHHHHHHHHHHHTTCCCCC-CEE-C---CEEEEEEETTTEEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCEEec-CcC-CC--cEEEEEECCCCcEEEEeC
Confidence             7999999999999999754 432 23  477999999999999973

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.80  E-value=3.1e-19  Score=120.02  Aligned_cols=120  Identities=18%  Similarity=0.241  Sum_probs=83.8

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEE-----eec-CCCCCCCCCCCCCCCce
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHL-----LQS-ENPDSLPKKSVINPKDN   82 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~-~~~~~~~~~~~~~~~~~   82 (168)
                      +.+++++|+.|.|+|++++++||+++|||+.....+    ..+++. .+..++.     ... .....  .......+..
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~-~g~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~   76 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG----SFVLFE-TGFAIHEGRSLEETIWRTSSD--AQEAYGRRNM   76 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS----SEEEET-TSCEEEEHHHHHHHHHSCCC----CCCSCCSSC
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC----CcEEEe-ccceeccCchhhhhccccCCc--cccccCCCce
Confidence            456789999999999999999999999999876543    223333 3333331     010 00000  0011234678


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           83 HLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        83 hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |++|.|+|+++++++|++ |+++..++.... ++.+.++|.|||||.|||++...
T Consensus        77 ~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           77 LLYFEHADVDAAFQDIAP-HVELIHPLERQA-WGQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             EEEEEESCHHHHHC-CGG-GSCEEEEEEECT-TSCEEEEEECTTCCEEEEEECC-
T ss_pred             EEEEEeCcHHHHHHHHHc-CCccccCCccCC-CCCEEEEEECCCCCEEEEEecch
Confidence            999999999999999999 999887765543 23467999999999999998653

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.79  E-value=9.8e-19  Score=117.53  Aligned_cols=120  Identities=19%  Similarity=0.203  Sum_probs=82.3

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC-CCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS-FNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNHLS   85 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~   85 (168)
                      |.+ ...||.|.|+|++++++||+++|||++..+... ..+..+++..++.  .+++.......  +.  ....+..|++
T Consensus         8 m~~-~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~--~~~~~~~hi~   82 (139)
T 1twu_A            8 FQA-AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGS--TA--PVPHPDSLLV   82 (139)
T ss_dssp             CBC-SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCC--CC--CCCCTTCEEE
T ss_pred             CCc-ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccCCCCeeEEEEecCCCceEEEEeecCCCC--CC--CCCCCccEEE
Confidence            443 456899999999999999999999998765321 2234455555432  45555443321  11  2234678999


Q ss_pred             EEeCCH---HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           86 FQCESV---GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        86 ~~v~dl---~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      |.|+|+   ++++++|+++|+++........+...  .||+|||||.|||++.
T Consensus        83 ~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~  133 (139)
T 1twu_A           83 FYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNS  133 (139)
T ss_dssp             EECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESS
T ss_pred             EEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEc
Confidence            999999   99999999999998732221111112  3699999999999985

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.79  E-value=5.2e-18  Score=114.80  Aligned_cols=118  Identities=17%  Similarity=0.232  Sum_probs=82.6

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCC-C---CCCCCCCCCceEEEEEeCCH
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS-L---PKKSVINPKDNHLSFQCESV   91 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~---~~~~~~~~~~~hl~~~v~dl   91 (168)
                      .+.|.|+|++++++||+++|||++.......  ..+++..++..+.|........ .   ........+ .+++|.|+|+
T Consensus         8 ~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~--~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g-~~~~~~v~dv   84 (145)
T 2rk9_A            8 VPELYCFDINVSQSFFVDVLGFEVKYERPDE--EFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSG-VNFQWDVIDI   84 (145)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEEEGGG--TEEEEEETTEEEEEEEC-----------CCSSTTTT-EEEEEECSCH
T ss_pred             eEEEEECCHHHHHHHHHhccCCEEEeecCCC--CEEEEEcCCeEEEEEeccCCCcccccCccccCCCCc-eEEEEEECCH
Confidence            6899999999999999999999987422111  3355666777777776522111 0   011111223 4599999999


Q ss_pred             HHHHHHHHH-cCCeEEeeeeee------CCeeEEEEEEECCCCCEEEEEeeC
Q 030972           92 GNVEKFLKE-MGIKYVRALVEE------GGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        92 ~~~~~~l~~-~g~~~~~~~~~~------~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ++++++|++ +|+++...+...      .+.+.+.++|.|||||.|||++..
T Consensus        85 d~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           85 EPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             HHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            999999999 999988766531      123457799999999999999864

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.78  E-value=7.8e-18  Score=129.04  Aligned_cols=122  Identities=20%  Similarity=0.349  Sum_probs=90.3

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC---CcceeEEecC----CcEEEEeecCCCCCCCCCCCCCCCc
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF---NFDGAWLFGH----GIGIHLLQSENPDSLPKKSVINPKD   81 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~   81 (168)
                      |++++|+||+|.|+|++++++||+++|||++..+....   +...+++...    +..+.++......   ......++.
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~---~~~~~~~~~   80 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGAR---QGVIGDGQV   80 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCC---BCBCCBSEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCC---CCCCCCCce
Confidence            46889999999999999999999999999998753211   1111333322    3567777764431   111223467


Q ss_pred             eEEEEEeC--CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           82 NHLSFQCE--SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        82 ~hl~~~v~--dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .|++|.|+  |+++++++|+++|+++..  ....+  .+.+||.|||||.|||++...
T Consensus        81 ~hiaf~V~~~dl~~~~~rL~~~Gv~~~~--~~~~g--~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           81 GVTSYVVPKGAMAFWEKRLEKFNVPYTK--IERFG--EQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHTTCCCEE--EEETT--EEEEEEECTTSCEEEEEECSC
T ss_pred             EEEEEEecHHHHHHHHHHHHhCcceeee--eccCC--cEEEEEECCCCCEEEEEEeCC
Confidence            89999999  999999999999999875  33333  467999999999999999764

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.77  E-value=6.7e-18  Score=130.74  Aligned_cols=122  Identities=20%  Similarity=0.251  Sum_probs=90.8

Q ss_pred             CCccCCCC----CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCc----EEEEeecCCCCCCC
Q 030972            1 MKESAGNP----LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGI----GIHLLQSENPDSLP   72 (168)
Q Consensus         1 m~~~~~~~----~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~   72 (168)
                      |.+..|.+    ..|.+|+||.|.|+|++++++||+++|||++..+.+    ..+|+...+.    .+.+....      
T Consensus         1 Ms~~~P~P~~P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~----~~~~lr~~~~~~~~~l~l~~~~------   70 (365)
T 4ghg_A            1 MSNEIPKPVAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE----NQIYLRSFEEFIHHNLVLTKGP------   70 (365)
T ss_dssp             --CCCCCCSSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEEEEECTTCCSSCSEEEEECS------
T ss_pred             CCCCCCCCCCCCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC----CEEEEEeCCCCcceEEEeccCC------
Confidence            77777744    347899999999999999999999999999988754    4566655432    34443322      


Q ss_pred             CCCCCCCCceEEEEEeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           73 KKSVINPKDNHLSFQCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        73 ~~~~~~~~~~hl~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                           ..+..|++|.|.   +++++.++|+++|+++...+........+.++|.|||||.|||+....
T Consensus        71 -----~~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~  133 (365)
T 4ghg_A           71 -----VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETT  133 (365)
T ss_dssp             -----SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             -----CCCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEee
Confidence                 237899999997   588899999999999876543322122356999999999999997654

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.77  E-value=6.1e-18  Score=127.89  Aligned_cols=116  Identities=20%  Similarity=0.275  Sum_probs=87.7

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEec-CC---cEEEEeecCCCCCCCCCCCCCCCceE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFG-HG---IGIHLLQSENPDSLPKKSVINPKDNH   83 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (168)
                      ||.+++|+||.|.|+|++++++||+++|||+...+...   ..+++.. ++   ..+.+....           ..+..|
T Consensus         3 m~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~h   68 (309)
T 3hpy_A            3 MTGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ---GRVYFKCWDERDHSCYIIREAD-----------TAGIDF   68 (309)
T ss_dssp             BCSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT---SCEEEECTTCCBSCSEEEEECS-----------SCEEEE
T ss_pred             ccccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC---CeEEEEeccCCCceEEEEEeCC-----------CCceeE
Confidence            35688999999999999999999999999999876431   3455543 32   344444322           236799


Q ss_pred             EEEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           84 LSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        84 l~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++|.|+|   +++++++|+++|+++...+........+.+||.|||||.|||++...
T Consensus        69 ~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           69 FGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             EEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccc
Confidence            9999986   99999999999999876654211123366999999999999998764

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.77  E-value=8.6e-18  Score=114.15  Aligned_cols=117  Identities=13%  Similarity=0.163  Sum_probs=78.2

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeec--cCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEE---
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIR--RPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHL---   84 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl---   84 (168)
                      .+.+++|+.|.|+|++++++||+++|||++..  ... .  ...++   +..+++ ....... ... .......++   
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~--~~~~~---g~~l~l-~~~~~~~-~~~-~~~~~~~~~g~~   88 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDD-E--GFGDY---GCVFDY-PSEVAVA-HLT-PFRGFHLFKGEP   88 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECT-T--SCEEE---EEEESS-CTTTTSC-C---CCCSEEEEESCC
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecC-C--CccEE---ccEEEE-eccCCCc-ccc-cccccceeeccC
Confidence            36789999999999999999999999999853  211 1  22333   222333 0111111 100 000111122   


Q ss_pred             -----EE-EeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           85 -----SF-QCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        85 -----~~-~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                           +| .|+|+++++++|+++|+++..++...+ ++.+.++|.|||||.|||.+..
T Consensus        89 ~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           89 IKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQP-WGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEET-TTEEEEEEECTTSCEEEEEEEC
T ss_pred             CCccEEEEEcCCHHHHHHHHHHcCCccccCcccCC-CccEEEEEECCCCCEEEEeeec
Confidence                 55 899999999999999999877765443 3456799999999999999853

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.76  E-value=7.9e-18  Score=127.08  Aligned_cols=113  Identities=17%  Similarity=0.216  Sum_probs=88.0

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeec-cCCCCCcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIR-RPGSFNFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~-~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      ||.+++++||.|.|+|++++++||+++|||+... ...    ..+++..++  ..+.+....           ..+..|+
T Consensus         1 Mm~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~----~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~   65 (305)
T 2wl9_A            1 MAKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGED----DRIYLRMDRWHHRIVLHADG-----------SDDLAYI   65 (305)
T ss_dssp             CCCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSCT----TEEEEECSSBSCSEEEECSS-----------CCEEEEE
T ss_pred             CCccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccCC----CeEEEEeCCCeEEEEEEECC-----------CCCeEEE
Confidence            4678999999999999999999999999999886 332    345665554  456664321           2367899


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeEEeeeeee--CCeeEEEEEEECCCCCEEEEEee
Q 030972           85 SFQCE---SVGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        85 ~~~v~---dl~~~~~~l~~~g~~~~~~~~~~--~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +|.|+   |+++++++|+++|+++...+...  .....+.++|.|||||.|||++.
T Consensus        66 ~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           66 GWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             EEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            99996   69999999999999987665432  11235779999999999999987

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.76  E-value=9.7e-18  Score=127.72  Aligned_cols=116  Identities=18%  Similarity=0.244  Sum_probs=88.7

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEec-C---CcEEEEeecCCCCCCCCCCCCCCCce
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFG-H---GIGIHLLQSENPDSLPKKSVINPKDN   82 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~---~~~~~l~~~~~~~~~~~~~~~~~~~~   82 (168)
                      +.+++.+++|+.|.|+|++++++||+++|||+...+.+    ..+++.. +   ...+.+....           ..+..
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~   75 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVLRQGP-----------IAAVA   75 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEEEEECTTCCSSCSEEEEECS-----------SCEEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC----CEEEEEecCCCCcEEEEEEECC-----------CCCee
Confidence            55778999999999999999999999999999887653    3455653 3   2345554321           23678


Q ss_pred             EEEEEe---CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           83 HLSFQC---ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        83 hl~~~v---~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |++|.|   +|+++++++|+++|+++...+........+.++|.||+||.|||++...
T Consensus        76 ~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~  133 (323)
T 1f1u_A           76 AFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  133 (323)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             EEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecc
Confidence            999999   6899999999999999887654211112356999999999999998754

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.76  E-value=2.3e-17  Score=126.57  Aligned_cols=120  Identities=18%  Similarity=0.272  Sum_probs=90.3

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC-CCCcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCceEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG-SFNFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDNHLS   85 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~   85 (168)
                      +.+.+|+|+.|.|+|++++++||+++|||++..... .......|+..++  ..+.+.....        ...++.+|++
T Consensus       149 ~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~g~~~~~~l~~~~~~~~l~~~~~~~--------~~~~~~~Hia  220 (339)
T 3lm4_A          149 IPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVVDGNVEIGAWMSSNLLGHEVACMRDMT--------GGHGKLHHLA  220 (339)
T ss_dssp             SCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEEETTEEEEEEEESSSSSCSEEEEECTT--------SCCSEEEEEE
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEecCCcEEEEEEEeCCCceEEEEeccCC--------CCCCceeEEE
Confidence            468899999999999999999999999999876532 1112355666554  2455554211        1134689999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           86 FQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        86 ~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |.|+|   +++++++|+++|+++...|........+++||+||+||.|||+...
T Consensus       221 f~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          221 FFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             EECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             EEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence            99998   8888999999999998777644323356799999999999998554

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.75  E-value=2.1e-17  Score=126.59  Aligned_cols=124  Identities=15%  Similarity=0.221  Sum_probs=88.8

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcc---eeEEecC----CcEEEEeecCCCCCCCCCCCCCCC
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFD---GAWLFGH----GIGIHLLQSENPDSLPKKSVINPK   80 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~---~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~   80 (168)
                      |+++.+|+||.|.|+|++++++||+++|||+........+..   .+++..+    +..+.+.......   .......+
T Consensus        25 m~~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~---~~~~~~~~  101 (338)
T 1zsw_A           25 MYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG---RTYRGTNA  101 (338)
T ss_dssp             SSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCC---BCBCCBSE
T ss_pred             cCcCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCc---cCcCCCCC
Confidence            446889999999999999999999999999987653101001   1222222    3456666543221   11112346


Q ss_pred             ceEEEEEeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           81 DNHLSFQCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        81 ~~hl~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ..|++|.|+   |+++++++|+++|+++...+. ..|.  +.+||.|||||.|||++...
T Consensus       102 ~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~-~~G~--~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A          102 ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT-YANR--PALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHHTTCEECCSEE-ETTE--EEEEEECTTCCEEEEEECTT
T ss_pred             eeeEEEEcCCHHHHHHHHHHHHHCCCccccccc-cCCc--EEEEEECCCCCEEEEEEcCC
Confidence            789999998   689999999999999876554 3443  77999999999999999764

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.75  E-value=3.6e-17  Score=125.35  Aligned_cols=120  Identities=11%  Similarity=0.214  Sum_probs=87.9

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC--CcEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH--GIGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      ..+.+++|+||+|.|+|++++.+||+++|||+...+.+    ..+.+..+  +..+++......   +......++.+|+
T Consensus       147 ~~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~----~~~~~~~g~~~~~l~l~~~~~~---~~~~~g~g~~~Hi  219 (335)
T 3oaj_A          147 PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG----DFVRYRSAGDIGNVIDLKLTPI---GRGQMGAGTVHHI  219 (335)
T ss_dssp             TTTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET----TEEEEECSSSSSCEEEEESSCC---CBCBCSBTEEEEE
T ss_pred             hhhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC----CEEEEEeCCCCcEEEEEeCCCC---CcCCCCCcceEEE
Confidence            44678999999999999999999999999999987643    22334333  246777654322   1111223467899


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           85 SFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        85 ~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ||.|+|   ++++.++|+++|+++... ....  +.+++||+||+||.|||.+..
T Consensus       220 Af~v~d~~~l~~~~~~L~~~G~~~~~~-~~r~--~~~siYfrDP~G~~iEl~td~  271 (335)
T 3oaj_A          220 AWRANDDEDQLDWQRYIASHGYGVTPV-RDRN--YFNAIYFREHGEILFEIATDP  271 (335)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCCCCC-EECS--SSEEEEEECTTSCEEEEEESC
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCCcccc-ccCC--cEEEEEEECCCCcEEEEEeCC
Confidence            999997   667899999999986533 2222  236799999999999999973

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.75  E-value=3e-17  Score=123.87  Aligned_cols=119  Identities=14%  Similarity=0.190  Sum_probs=85.1

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC-CC-cceeEEecCC--cEEEEeecCCCCCCCCCCCCCCC-ce
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS-FN-FDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPK-DN   82 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~-~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~-~~   82 (168)
                      .|.+.+++|+.|.|+|++++++||+++|||+....... .+ ....|+..+.  ..+.+....           ..+ ..
T Consensus       145 ~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----------~~g~~~  213 (307)
T 1mpy_A          145 GMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP-----------EKGRLH  213 (307)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS-----------SSSEEE
T ss_pred             CCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecCC-----------CCCcce
Confidence            36788999999999999999999999999998764321 11 1123444332  234443211           124 69


Q ss_pred             EEEEEeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           83 HLSFQCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        83 hl~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |++|.|+   ++++++++|+++|+++...+...+....+.+||+|||||.|||++...
T Consensus       214 hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          214 HVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence            9999999   566778999999999876665432112357999999999999999754

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.74  E-value=2.6e-17  Score=121.40  Aligned_cols=115  Identities=15%  Similarity=0.202  Sum_probs=88.2

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEe
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQC   88 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v   88 (168)
                      -.+++|+||.|.|+|++++++||+++|||++..+..    ..+++..++..+.|......         ..+..|++|.|
T Consensus        22 ~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~~~~L~~g~~~l~l~~~~~~---------~~~~~hiaf~V   88 (252)
T 3pkv_A           22 GHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----DAFTIQLGVSQIQFRAAADG---------TKPFYHIAINI   88 (252)
T ss_dssp             ---CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----SEEEEEETTEEEEEEECCTT---------CCCCCEEEEEE
T ss_pred             CcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----CEEEEEeCCEEEEEEECCCC---------CCCeeEEEEEe
Confidence            456799999999999999999999999999887654    34667777777777664322         23578999998


Q ss_pred             C--CHHHHHHHHHHcCCeEEee-eee---eCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           89 E--SVGNVEKFLKEMGIKYVRA-LVE---EGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        89 ~--dl~~~~~~l~~~g~~~~~~-~~~---~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +  ++++++++|+++ +++... +..   ...++.+.+||+|||||.|||++...
T Consensus        89 ~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           89 AANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             CTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             cHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            5  799999999999 988652 111   11234577999999999999999765

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.74  E-value=4.7e-17  Score=124.79  Aligned_cols=115  Identities=16%  Similarity=0.277  Sum_probs=88.6

Q ss_pred             CCCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC----cEEEEeecCCCCCCCCCCCCCCCc
Q 030972            6 GNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG----IGIHLLQSENPDSLPKKSVINPKD   81 (168)
Q Consensus         6 ~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~   81 (168)
                      ++++.+.+|+||.|.|+|++++++||+++|||+...+.+    ..+++...+    ..+.+....           ..+.
T Consensus         4 ~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~~l~~~~~~~~~~l~l~~~~-----------~~g~   68 (339)
T 3lm4_A            4 DARFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG----QSVYLRGYEDPYPWSLKITEAP-----------EAGM   68 (339)
T ss_dssp             CGGGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET----TEEEEECTTCSSSCSEEEEECS-----------SCEE
T ss_pred             CCCCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC----CEEEEEecCCCCceEEEEeeCC-----------CCCc
Confidence            455778999999999999999999999999999887643    345555421    234443322           2368


Q ss_pred             eEEEEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           82 NHLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        82 ~hl~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .|++|.|+|   ++++.++|+++|+++...+.. .+ ..+.++|.|||||.|||+....
T Consensus        69 ~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~-~~-~~~~~~f~DPdG~~iel~~~~~  125 (339)
T 3lm4_A           69 GHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQ-FG-YGKTFEYQSPDGHNLQLLWEAE  125 (339)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEECCS-TT-BCCEEEEECTTCCEEEEECCBC
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHCCCceeeccCC-CC-ceEEEEEECCCCCEEEEEEeee
Confidence            999999987   899999999999999766542 22 2356999999999999998754

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.74  E-value=1.3e-17  Score=125.85  Aligned_cols=117  Identities=14%  Similarity=0.102  Sum_probs=86.4

Q ss_pred             CCCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCceE
Q 030972            6 GNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDNH   83 (168)
Q Consensus         6 ~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (168)
                      ...|++++++||.|.|+|++++++||+++|||+...+..   ....|+..+.  ..+.+....           ..+..|
T Consensus         2 ~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~l~l~~~~-----------~~~~~~   67 (302)
T 2ehz_A            2 SKQAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE---KDRFYLRMDYWHHRIVVHHNG-----------QDDLEY   67 (302)
T ss_dssp             --CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC---SSEEEEESSSBSCSEEEESSC-----------CSEEEE
T ss_pred             CCcccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC---CcceEEEeCCCceEEEEecCC-----------CCCeeE
Confidence            345789999999999999999999999999999887532   1345555432  234443211           135689


Q ss_pred             EEEEeC---CHHHHHHHHHHcCCeEEeeeeeeC--CeeEEEEEEECCCCCEEEEEeeC
Q 030972           84 LSFQCE---SVGNVEKFLKEMGIKYVRALVEEG--GILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        84 l~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~--g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ++|.|.   |+++++++|+++|+++...+....  ....+.+||.|||||.|||++..
T Consensus        68 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  125 (302)
T 2ehz_A           68 LGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGP  125 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECC
Confidence            999995   799999999999999876543221  02346799999999999999864

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.74  E-value=2.7e-17  Score=124.38  Aligned_cols=119  Identities=22%  Similarity=0.203  Sum_probs=86.7

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC---CCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS---FNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNH   83 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   83 (168)
                      +.+.+|+||.|.|+|++++.+||+++|||+.......   ......|+..++.  .+.+....          ..++.+|
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~H  216 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYP----------EKGKLHH  216 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEECS----------STTEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecCC----------CCCceeE
Confidence            5688999999999999999999999999998664321   1123456655432  23333321          1235899


Q ss_pred             EEEEeCCHHH---HHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           84 LSFQCESVGN---VEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        84 l~~~v~dl~~---~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++|.|+|+++   ++++|+++|+++...+........+++||+|||||.|||+....
T Consensus       217 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g~  273 (309)
T 3hpy_A          217 CSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGGY  273 (309)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCCc
Confidence            9999987664   67899999999876665433223567999999999999998754

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.74  E-value=3.3e-17  Score=123.27  Aligned_cols=112  Identities=18%  Similarity=0.322  Sum_probs=83.3

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeec-cCCCCCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIR-RPGSFNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNHLS   85 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~-~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~   85 (168)
                      |++++|+|+.|.|+|++++++||+++|||++.. +..    ..+++..++.  .+.+....           ..+..|++
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~~   65 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE----GALYLRMDDFPARLVVVPGE-----------HDRLLEAG   65 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS----SCEEEESSSSSCSEEEEECS-----------SCEEEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC----CeEEEEeCCCcEEEEEecCC-----------CCCcceEE
Confidence            467899999999999999999999999999876 432    2355554432  34443311           23678999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeEEeeeeee--CCeeEEEEEEECCCCCEEEEEee
Q 030972           86 FQCES---VGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        86 ~~v~d---l~~~~~~l~~~g~~~~~~~~~~--~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      |.|++   +++++++|+++|+++...+...  .....+.++|.|||||.|||++.
T Consensus        66 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           66 WECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             EECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            99974   8889999999999987654321  00123569999999999999997

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.74  E-value=5.7e-17  Score=122.86  Aligned_cols=114  Identities=23%  Similarity=0.258  Sum_probs=87.3

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      ..+.+|+|+.|.|+|++++++||+++|||++......   ...|+..++  ..+.+....            .+..|++|
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---~~~fl~~~~~~~~l~l~~~~------------~g~~hi~f  201 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLGD---FMCFLRCNSAHHRIAILPGP------------PCLNHVAY  201 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEETT---TEEEEESSSBSCSEEEEESS------------SEEEEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeCC---eEEEEecCCCcceEEEECCC------------CceEEEEE
Confidence            4678999999999999999999999999998765321   456665543  234444321            36899999


Q ss_pred             EeCCHHHH---HHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           87 QCESVGNV---EKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        87 ~v~dl~~~---~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .|+|++++   +++|+++|+++...+........+++||+||+||.|||.+...
T Consensus       202 ~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          202 DMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             EcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCcc
Confidence            99997776   9999999999877665432123467999999999999998654

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.73  E-value=6.6e-17  Score=121.62  Aligned_cols=117  Identities=19%  Similarity=0.178  Sum_probs=84.8

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC-C---------C-CcceeEEecCC--cEEEEeecCCCCCCCCCCC
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG-S---------F-NFDGAWLFGHG--IGIHLLQSENPDSLPKKSV   76 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~---------~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~   76 (168)
                      .+.+++|+.|.|+|++++++||+++|||+...... .         . .....|+..++  ..+.+....          
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------  208 (300)
T 2zyq_A          139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMP----------  208 (300)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESSC----------
T ss_pred             CCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecCC----------
Confidence            46789999999999999999999999999864311 0         0 11234554433  234444321          


Q ss_pred             CCCCceEEEEEeCCHHH---HHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           77 INPKDNHLSFQCESVGN---VEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        77 ~~~~~~hl~~~v~dl~~---~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ...+..|++|.|+|+++   ++++|+++|+++...+........+.+||+|||||.|||++..
T Consensus       209 ~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          209 TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            12467899999998665   5999999999998766444322346799999999999999865

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.73  E-value=1.4e-16  Score=121.98  Aligned_cols=118  Identities=15%  Similarity=0.309  Sum_probs=85.7

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEec--CCc--EEEEeecCCCCCCCCCCCCCCCceE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFG--HGI--GIHLLQSENPDSLPKKSVINPKDNH   83 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~--~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   83 (168)
                      .+.+.+++|+.|.|+|++++++||+++|||+......    ...++..  ++.  .+..+.....    .......+..|
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~h  246 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGEAFGEIVVKYLDGP----TEKPGRGSIHH  246 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTCSTTCEEEEECCSS----BCBCCBTCEEE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----CeEEEEecCCCCceEEEEeccCCC----CCCCCCCceEE
Confidence            4668899999999999999999999999999887654    1233333  222  3333332111    11111245789


Q ss_pred             EEEEeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           84 LSFQCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        84 l~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ++|.|+   |+++++++|+++|+++. ++....  +.+.+||+|||||.|||++..
T Consensus       247 iaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~~--~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          247 LAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEE
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCcee-eeeecC--ceEEEEEECCCCCEEEEEEcC
Confidence            999998   69999999999999985 444333  346799999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.72  E-value=1.9e-16  Score=120.58  Aligned_cols=117  Identities=21%  Similarity=0.277  Sum_probs=85.5

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      +.+.+|+|+.|.|+|++++.+|| ++|||++.....  .......|+..++  ..+.+....           ..+.+|+
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~-----------~~~~~Hi  215 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN-----------GPRMHHV  215 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS-----------BSEEEEE
T ss_pred             CCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCCC-----------CCCceEE
Confidence            56789999999999999999999 999999875422  1111234554432  234443211           1278999


Q ss_pred             EEEeCCHHH---HHHHHHHcCC--eEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           85 SFQCESVGN---VEKFLKEMGI--KYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        85 ~~~v~dl~~---~~~~l~~~g~--~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +|.|+|+++   ++++|+++|+  ++...+........+++||+||+||.|||++...
T Consensus       216 af~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  273 (323)
T 1f1u_A          216 AFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  273 (323)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             EEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCCE
Confidence            999999988   9999999999  8876554433223456999999999999997543

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.72  E-value=1e-16  Score=121.42  Aligned_cols=114  Identities=16%  Similarity=0.295  Sum_probs=90.1

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC----cEEEEeecCCCCCCCCCCCCCCCceE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG----IGIHLLQSENPDSLPKKSVINPKDNH   83 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (168)
                      .|.+.+++|+.|.|+|++++++||+++|||+.....+    ..+++..++    ..+.+....           ..+..|
T Consensus         3 ~~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~~   67 (310)
T 3b59_A            3 LSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----NNAWFKAQGADEHHVVQLRRAD-----------ENRIDV   67 (310)
T ss_dssp             CCCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS----SEEEEECTTSCCSCSEEEEECS-----------SCEEEE
T ss_pred             ceecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC----CeEEEEECCCCCCEEEEEEECC-----------CCCeeE
Confidence            4678999999999999999999999999999877643    345666554    456665432           236789


Q ss_pred             EEEEe---CCHHHHHHHHHHcCCeEEeeeee--eCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           84 LSFQC---ESVGNVEKFLKEMGIKYVRALVE--EGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        84 l~~~v---~dl~~~~~~l~~~g~~~~~~~~~--~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++|.|   +|+++++++|+++|+++...+..  .. ...+.++|.||+||.|||++...
T Consensus        68 ~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~~  125 (310)
T 3b59_A           68 IALAADSRSDVDALRASVEAAGCKVASEPAVLATP-GGGYGFRFFSPDGLLFEVSSDVA  125 (310)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCST-TCCEEEEEECTTSCEEEEEECCC
T ss_pred             EEEEeCCHHHHHHHHHHHHhCCCeEeecCcccccc-CCceEEEEECCCCCEEEEEEccc
Confidence            99998   68999999999999998776654  22 23466899999999999998764

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.72  E-value=3.9e-16  Score=116.87  Aligned_cols=120  Identities=16%  Similarity=0.113  Sum_probs=85.9

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCc-ceeEEecCCcE-EEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNF-DGAWLFGHGIG-IHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~-~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      ..++|+.|.|+|++++++||+++||++.......... ...++..++.. ..+......  .+   .......+++|.|+
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~--~~---~~~~~~~~~~~~v~  105 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLNGEAVAAIAPMPPG--AP---EGMPPIWNTYIAVD  105 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEEEETTEEEEEEEECCSC--C------CCCEEEEEEECS
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeCCeeeEeeccCCCC--CC---CCCCCcEEEEEEeC
Confidence            3799999999999999999999999998775432110 12334444433 233332221  11   11235578999999


Q ss_pred             CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           90 SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        90 dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |+++++++|+++|+++...+....+ ..+.++|.||+||.|||++...
T Consensus       106 d~d~~~~~l~~~G~~~~~~p~~~~~-~g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A          106 DVDAVVDKVVPGGGQVMMPAFDIGD-AGRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             CHHHHHTTTTTTTCEEEEEEEEETT-TEEEEEEECTTCCEEEEEEESS
T ss_pred             CHHHHHHHHHHCCCEEEECCEecCC-CeEEEEEECCCCCEEEEEEccc
Confidence            9999999999999999887766543 2377999999999999999865

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.71  E-value=5.8e-17  Score=121.76  Aligned_cols=114  Identities=13%  Similarity=0.190  Sum_probs=84.7

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC-
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE-   89 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-   89 (168)
                      +++|+||.|.|+|++++++||+++|||++.....    ..+++..++..+.+......         ..+..|++|.|+ 
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~f~v~~   68 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDLFRIDSRAWRIAVQQGE---------VDDLAFAGYEVAD   68 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEESS
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC----CeEEEEeCCCcEEEEEecCC---------CCCccEEEEEeCC
Confidence            5789999999999999999999999999887543    24556555432222221111         236789999998 


Q ss_pred             --CHHHHHHHHHHcCCeEEeeeeee--CCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           90 --SVGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        90 --dl~~~~~~l~~~g~~~~~~~~~~--~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                        |+++++++|+++|+++...+...  .....+.+||.|||||.|||++...
T Consensus        69 ~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           69 AAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             HHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECcc
Confidence              99999999999999987654321  0012366999999999999999754

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.71  E-value=5e-16  Score=116.28  Aligned_cols=118  Identities=13%  Similarity=0.119  Sum_probs=84.6

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCC
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCES   90 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d   90 (168)
                      ...+.|+.|.|+|++++++||+++||++.............++..++..+..+. ...   +   ....+..|++|.|+|
T Consensus       162 ~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~---~~~~~~~~~~~~v~d  234 (282)
T 3oxh_A          162 TGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEVGGCM-EPP---M---PGVPNHWHVYFAVDD  234 (282)
T ss_dssp             TTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC-------CEEEEETTEEEEEEE-CCS---S---TTCCSEEEEEEECSC
T ss_pred             CCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcceEEEEcCCccEeeec-CCC---C---CCCCCeEEEEEEeCC
Confidence            357899999999999999999999999987653111112233444443332221 111   1   112356899999999


Q ss_pred             HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           91 VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        91 l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +++++++++++|+++...+...++ +.+.++|.||+||.|||++..
T Consensus       235 vd~~~~~~~~~G~~~~~~p~~~~~-~~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          235 ADATAAKAAAAGGQVIAEPADIPS-VGRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHHcCCEEecCCeEcCC-CeEEEEEECCCCCEEEEEecC
Confidence            999999999999999888766542 347799999999999999964

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.71  E-value=1.6e-16  Score=119.39  Aligned_cols=116  Identities=14%  Similarity=0.190  Sum_probs=84.8

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC-----CCcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCce
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS-----FNFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDN   82 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-----~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~   82 (168)
                      .+.+++|+.|.|+|++++++||+++|||+.......     ......|+..++  ..+.+...  +        ...+..
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~--~--------~~~~~~  208 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAF--P--------LPKRIH  208 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC--C--------CSSSEE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcC--C--------CCCCce
Confidence            467899999999999999999999999998653110     011335554433  34555432  1        124678


Q ss_pred             EEEEEeCCHHHHH---HHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           83 HLSFQCESVGNVE---KFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        83 hl~~~v~dl~~~~---~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |++|.|+|++++.   ++ +++|+++...+...+....+++||+|||||.|||++..
T Consensus       209 hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          209 HFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             EEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            9999999988776   88 99999998776554322346699999999999999865

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.71  E-value=5.3e-17  Score=122.53  Aligned_cols=116  Identities=18%  Similarity=0.305  Sum_probs=85.1

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      ++++++||.|.|+|++++++||+++|||+...+...   ..+++..++  ..+.+......         ..+..|++|.
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~~~~l~~~~~~~~~~l~~~~~~---------~~~~~~~~f~   71 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ---GRVYLKAWTEVDKFSLVLREAD---------EPGMDFMGFK   71 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT---SCEEEECTTCCBSCSEEEEECS---------SCEEEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC---CcEEEEecCCCCceEEEEccCC---------CCCcceEEEE
Confidence            367999999999999999999999999999876431   235554432  22223222111         2367899999


Q ss_pred             e---CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           88 C---ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        88 v---~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |   +|+++++++|+++|+++...+........+.++|.|||||.|||++...
T Consensus        72 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  124 (307)
T 1mpy_A           72 VVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (307)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             eCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcch
Confidence            9   7999999999999999876653111112356899999999999998653

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.71  E-value=1.5e-16  Score=120.09  Aligned_cols=116  Identities=12%  Similarity=0.189  Sum_probs=82.7

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC----CC-CcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCce
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG----SF-NFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDN   82 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~   82 (168)
                      .+.+++|+.|.|+|++++++|| ++|||+......    .. .....|+..++  ..+.+...          ....+..
T Consensus       143 ~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~  211 (305)
T 2wl9_A          143 EGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVG----------PMDKRIN  211 (305)
T ss_dssp             TTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCS----------CCSSSEE
T ss_pred             CCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecC----------CCCCCce
Confidence            4578999999999999999999 999999864321    00 12344554433  22333221          1124679


Q ss_pred             EEEEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           83 HLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        83 hl~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |++|.|+|   +++++++|+++|+++...+........+++||+|||||.|||++..
T Consensus       212 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          212 HLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            99999998   5667889999999998766444322245689999999999999865

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.71  E-value=7e-17  Score=121.05  Aligned_cols=113  Identities=12%  Similarity=0.231  Sum_probs=84.0

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC-
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE-   89 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-   89 (168)
                      +++|+||.|.|+|++++++||+++|||++..+..    ..+|+..++..+.+......         ..+..|++|.|+ 
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~----~~~~l~~~~~~~~l~~~~~~---------~~~~~~~~f~v~~   68 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEVDD   68 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSSBSCSEEEEECT---------TCEEEEEEEECSS
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC----CeEEEEcCCceEEEEEccCC---------CCCccEEEEEECC
Confidence            6789999999999999999999999999887543    23555544432222221111         235689999998 


Q ss_pred             --CHHHHHHHHHHcCCeEEeeeee---eCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           90 --SVGNVEKFLKEMGIKYVRALVE---EGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        90 --dl~~~~~~l~~~g~~~~~~~~~---~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                        |+++++++|+++|+++...+..   ..+ ..+.++|.|||||.|||++...
T Consensus        69 ~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           69 AAALERMADKLRQAGVAFTRGDEALMQQRK-VMGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             HHHHHHHHHHHHHHTCCCEECCHHHHHHHT-CSEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHHcCCeEeecCcccccccC-ceEEEEEECCCCCEEEEEECcc
Confidence              8999999999999998765532   111 2356899999999999998754

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.69  E-value=1.8e-16  Score=118.80  Aligned_cols=117  Identities=15%  Similarity=0.167  Sum_probs=83.3

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC-----CcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCc
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF-----NFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKD   81 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-----~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~   81 (168)
                      +.+.+++|+.|.|+|++++++||+++|||+........     .....|+..++  ..+.+.....          ..+.
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  207 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPI----------PKRI  207 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCSC----------SSSE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecCCC----------CCce
Confidence            56789999999999999999999999999987532100     11234554432  2344432110          2467


Q ss_pred             eEEEEEeCCHHH---HHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCC-EEEEEeeC
Q 030972           82 NHLSFQCESVGN---VEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGF-MIEICDCD  136 (168)
Q Consensus        82 ~hl~~~v~dl~~---~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~-~iel~~~~  136 (168)
                      +|++|.|+|+++   ++++|+ +|+++...+........+++||+||||| .|||++..
T Consensus       208 ~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          208 HHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            999999998665   677999 9999876654433223456899999999 99999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.69  E-value=3e-16  Score=119.96  Aligned_cols=117  Identities=10%  Similarity=0.095  Sum_probs=84.2

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC-------------CCcceeEEecC----CcEEEEeecCCCC
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS-------------FNFDGAWLFGH----GIGIHLLQSENPD   69 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-------------~~~~~~~~~~~----~~~~~l~~~~~~~   69 (168)
                      .+|.+++++|++|.|+|++++++||+++|||++..+...             ..+..+++..+    ...++|.......
T Consensus        21 ~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~  100 (330)
T 3zi1_A           21 QSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG  100 (330)
T ss_dssp             GGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC
T ss_pred             eecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC
Confidence            456678999999999999999999999999998664321             11223344332    2356665543321


Q ss_pred             CCCCCCCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           70 SLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        70 ~~~~~~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                          ......++.|++|.|+|+   .++++++|+++...+   .+    .+||.|||||.|||++...
T Consensus       101 ----~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~---~~----~~~~~DPdG~~iel~~~~~  154 (330)
T 3zi1_A          101 ----DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA---EG----VFETEAPGGYKFYLQNRSL  154 (330)
T ss_dssp             ----CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE---TT----EEEEECTTSCEEEEESSCC
T ss_pred             ----ccccCCCeeEEEEECchH---HHHHHHcCCceeccC---Cc----eEEEECCCCCEEEEEecCC
Confidence                112345789999999987   678888999987544   21    4899999999999999753

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.69  E-value=1.3e-15  Score=116.49  Aligned_cols=117  Identities=21%  Similarity=0.305  Sum_probs=86.5

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      ..+.|+.|.|+|++++++||+++|||+........  ...|+..++.  .+.+......  .    ....+..|++|.|+
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~~~l~~g~~~~~l~l~~~~~~--~----~~~~~~~hiaf~v~  229 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK--QRALLGYADNQCKLELQGVKGG--V----DHAAAFGRIAFSCP  229 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT--TEEEEESSTTSCEEEEEECSSC--C----CCBTTCCEEEEEEC
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC--cEEEEEeCCceEEEEECCCCCC--C----CCCCCCceEEEEEE
Confidence            45889999999999999999999999998764422  2456655543  3444332211  1    12346679999995


Q ss_pred             --CHHHHHHHHHHcCCeEEeeeeee--CC-eeEEEEEEECCCCCEEEEEeeC
Q 030972           90 --SVGNVEKFLKEMGIKYVRALVEE--GG-ILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        90 --dl~~~~~~l~~~g~~~~~~~~~~--~g-~~~~~~~~~DPdG~~iel~~~~  136 (168)
                        |+++++++|+++|+++...+...  +| .+.+.+||+|||||.|||++..
T Consensus       230 ~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~  281 (330)
T 3zi1_A          230 QKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDE  281 (330)
T ss_dssp             GGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHH
T ss_pred             cccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEec
Confidence              89999999999999987766542  11 2457899999999999999864

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.67  E-value=4.2e-16  Score=117.49  Aligned_cols=116  Identities=16%  Similarity=0.175  Sum_probs=80.7

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC----CC-CcceeEEecCC--cEEEEeecCCCCCCCCCCCCCCCceE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG----SF-NFDGAWLFGHG--IGIHLLQSENPDSLPKKSVINPKDNH   83 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (168)
                      ..+++|+.|.|+|++++++|| ++|||+......    .. .....|+..++  ..+.+...  +        ...+.+|
T Consensus       147 ~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~h  215 (302)
T 2ehz_A          147 DQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGAM--P--------AAKRLNH  215 (302)
T ss_dssp             GGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECSC--C--------CSSSEEE
T ss_pred             CCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEecC--C--------CCCceeE
Confidence            458999999999999999999 999999764311    00 11234554432  12332211  0        1246789


Q ss_pred             EEEEeCCHHH---HHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           84 LSFQCESVGN---VEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        84 l~~~v~dl~~---~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++|.|+|+++   ++++|+++|+++...+........+++||+|||||.|||++...
T Consensus       216 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (302)
T 2ehz_A          216 LMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRGA  272 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECce
Confidence            9999998765   67799999999987665443223367999999999999998643

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.66  E-value=8.3e-15  Score=114.01  Aligned_cols=130  Identities=14%  Similarity=0.114  Sum_probs=95.9

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccC----CCCCcceeEEecCCcEEEEeecCCCCCC----CCC--CC
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRP----GSFNFDGAWLFGHGIGIHLLQSENPDSL----PKK--SV   76 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~--~~   76 (168)
                      .+|.+++++||.|.|+|++++++||+++|||+...+.    ........++..++..+.+.....+...    ...  ..
T Consensus        16 ~~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           16 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CCCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHh
Confidence            4578899999999999999999999999999998752    1112233445556667777765333211    000  01


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeee--CCeeEEEEEEECCCCCEEEEEeeC
Q 030972           77 INPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        77 ~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~--~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      .+.+..|++|.|+|+++++++|+++|+++...+...  .......+.|+||+|+.++|++..
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             cCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            245789999999999999999999999998776531  222345788999999999999864

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.64  E-value=7.3e-15  Score=101.83  Aligned_cols=117  Identities=9%  Similarity=0.067  Sum_probs=77.2

Q ss_pred             eeEEEEeCC--HHHHHHHHHHccCCeeeccC-------CC--CCcceeEEecCCcEEEEeecCCCCCCCCCCCCC-CCce
Q 030972           15 NHVSLVCRN--ISESIDFYQNVLGFVPIRRP-------GS--FNFDGAWLFGHGIGIHLLQSENPDSLPKKSVIN-PKDN   82 (168)
Q Consensus        15 ~hv~l~v~D--~~~a~~FY~~~LG~~~~~~~-------~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~   82 (168)
                      .+..|.|+|  +++|++||+++||+++....       ..  .......+..++..+.+.........+.  ... ....
T Consensus        26 i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~~~~~--~~~~~~g~  103 (166)
T 1xy7_A           26 FKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFST--AKSEGSGV  103 (166)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCC--CCTTSCCC
T ss_pred             EEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCcccCCcc--ccCCCCcE
Confidence            488999999  99999999999999987532       11  1111222444555555543211100000  110 2335


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEEeeeeee--CCeeEEEEEEECCCCCEEEEEeeC
Q 030972           83 HLSFQCESVGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        83 hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~--~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |++|.|+|+++++++|+++|++ ..++...  + + .+.++|.||+||.|+|.+..
T Consensus       104 ~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~-~-~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          104 TFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVE-L-GFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             EEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHH-T-TEEEEEECTTSCEEEEEC--
T ss_pred             EEEEEcCCHHHHHHHHHHCCCE-ECCcccccCc-c-cEEEEEECCCCCEEEEEeec
Confidence            9999999999999999999999 7766543  2 2 36799999999999999864

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.61  E-value=9.4e-16  Score=118.25  Aligned_cols=130  Identities=15%  Similarity=0.292  Sum_probs=91.0

Q ss_pred             CCCccceeeeEEEEeC--CHHHHHHHHHHccCCeeeccC----CCCCcceeEEecC--CcEEEEeecCCCCCCC-C----
Q 030972            7 NPLHLKSVNHVSLVCR--NISESIDFYQNVLGFVPIRRP----GSFNFDGAWLFGH--GIGIHLLQSENPDSLP-K----   73 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~----~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~-~----   73 (168)
                      ..+.+.+|+|+++.|+  |++++++||+++|||+.....    ........|+..+  ...+.+.+........ .    
T Consensus       152 ~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~  231 (357)
T 2r5v_A          152 GDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFL  231 (357)
T ss_dssp             TTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHH
T ss_pred             CCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHH
Confidence            3466889999999999  999999999999999987532    1111134455543  3577777654321110 0    


Q ss_pred             CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeC----------Cee------EEEEEEECCCCCEEEEEeeC
Q 030972           74 KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEG----------GIL------VEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        74 ~~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~----------g~~------~~~~~~~DPdG~~iel~~~~  136 (168)
                      ......+.+||+|.|+|+++++++|+++|+++...|....          +..      ...+|+.||||++|||.+..
T Consensus       232 ~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          232 KDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             HHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             HhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence            0012458899999999999999999999999877653210          000      02489999999999999853

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.59  E-value=4.5e-14  Score=111.20  Aligned_cols=130  Identities=8%  Similarity=0.050  Sum_probs=96.2

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC----CCCcceeEEecCCcEEEEeecCCCCC----------CC
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG----SFNFDGAWLFGHGIGIHLLQSENPDS----------LP   72 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~   72 (168)
                      ..|.+++++||.|.|+|++++++||++.|||++.....    .......++..++..+.|.....+..          .+
T Consensus        19 ~~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p   98 (424)
T 1sqd_A           19 DKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTAS   98 (424)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCS
T ss_pred             ccccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCcccccccccccccc
Confidence            35778999999999999999999999999999876532    11223445556667788877633210          00


Q ss_pred             --C---C------CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           73 --K---K------SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        73 --~---~------~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                        .   .      ...+.+..|++|.|+|+++++++++++|+++...|....+ ......+++|+|+.++|++...
T Consensus        99 ~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g  173 (424)
T 1sqd_A           99 IPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKA  173 (424)
T ss_dssp             STTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECC
T ss_pred             cccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCC
Confidence              0   0      0123678999999999999999999999999887765432 2355778899999999998764

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.59  E-value=3.3e-14  Score=109.60  Aligned_cols=128  Identities=10%  Similarity=0.045  Sum_probs=90.2

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCC--CCCCCCceEEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK--SVINPKDNHLSF   86 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hl~~   86 (168)
                      |.+++++||.|.|+|++++++||++.|||+...+....+.....+..+...+.+.....+......  ...+.+..|++|
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~iaf   80 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHRSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADIAM   80 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCceEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEEEE
Confidence            568899999999999999999999999999876532111122334456666666653232110000  012357899999


Q ss_pred             EeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           87 QCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        87 ~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      .|+|+++++++++++|+++...+....+.....+.|.||+|..++|++..
T Consensus        81 ~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           81 ATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             EECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            99999999999999999998766432111224588999999999999864

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.58  E-value=4.9e-14  Score=105.42  Aligned_cols=112  Identities=11%  Similarity=0.044  Sum_probs=78.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCC----cEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHG----IGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      ..++.+.|+|++++++||+++||++........ .....+..++    ..+.+.....        .......+++|.|+
T Consensus       184 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~v~  254 (301)
T 2zw5_A          184 AVITELPVRDVAATLRLVEAALGARTAFAIGDP-PEFAEAALTPWSAGPRFRLAAVPG--------PGPVEPVRLHLDAA  254 (301)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EEEEEEESSSSSSSSEEEEEECCC--------SSCCCCCEEEEEEE
T ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-ccEEEEEcCCCccccccccccCCC--------cCCCCceEEEEEcC
Confidence            357889999999999999999999987432211 0112333333    2233211110        11223568999999


Q ss_pred             -CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           90 -SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        90 -dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                       |+++++++++++|+++..++...+ ++.+.++|.|||||.|||.++
T Consensus       255 ~dvd~~~~~~~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          255 GTADSLHRRAVDAGARVDGPPVRRP-WGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             SCHHHHHHHHHHTTCCEEEEEEECT-TSCEEEEEECTTSCEEEEEEC
T ss_pred             ccHHHHHHHHHHcCCccccCcccCC-CcceEEEEECCCCCEEEeeCC
Confidence             999999999999999987776543 233669999999999999874

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.56  E-value=6.4e-14  Score=108.44  Aligned_cols=120  Identities=21%  Similarity=0.301  Sum_probs=83.6

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCce
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDN   82 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~   82 (168)
                      ....+.+|+|++|.|.|++++.+||++ |||.......  .......|+..+..  .+.+....           .++++
T Consensus       146 ~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~~-----------~~~lh  213 (365)
T 4ghg_A          146 SAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGGN-----------GPRLH  213 (365)
T ss_dssp             CTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEESS-----------BSEEE
T ss_pred             ccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeeecCC-----------CCcee
Confidence            335678999999999999999999987 9998765322  12223456655442  33333321           24789


Q ss_pred             EEEEEeCCHHH---HHHHHHHcCCe--EEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCCC
Q 030972           83 HLSFQCESVGN---VEKFLKEMGIK--YVRALVEEGGILVEQLFFHDPDGFMIEICDCDNL  138 (168)
Q Consensus        83 hl~~~v~dl~~---~~~~l~~~g~~--~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~~  138 (168)
                      |++|+|+|+++   +.++|+++|+.  +..+|....-...+++||+||+||.||+......
T Consensus       214 Hvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~~  274 (365)
T 4ghg_A          214 HVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDYY  274 (365)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             EEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCcC
Confidence            99999997765   46788888884  4445544332234669999999999999887653

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.55  E-value=4.7e-13  Score=89.61  Aligned_cols=115  Identities=17%  Similarity=0.161  Sum_probs=77.4

Q ss_pred             eeeeEEEEeC--CHHHHHHHHHHcc-CCeeec--cCCC------CCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCc
Q 030972           13 SVNHVSLVCR--NISESIDFYQNVL-GFVPIR--RPGS------FNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKD   81 (168)
Q Consensus        13 ~l~hv~l~v~--D~~~a~~FY~~~L-G~~~~~--~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   81 (168)
                      ++. ..|.+.  |+++|++||+++| |+++..  +...      .....+-+..++..+.+........     ......
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~-----~~~~~~   79 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHA-----FDFTPA   79 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCS-----CCCCTT
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCCCC-----CCCCCc
Confidence            454 667776  9999999999999 999874  2111      1111222344554444433221101     011234


Q ss_pred             eEEEEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           82 NHLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        82 ~hl~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      ..++|.|+|   +++++++|+ +|.++..++...+ ++.+.++|.||+||.|+|...
T Consensus        80 ~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~-~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           80 FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYG-FSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCS-SSSEEEEEECTTSCEEEEEEC
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCC-CcceEEEEECCCCCEEEEEec
Confidence            689999999   999999999 9999987776654 334668999999999999973

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.55  E-value=1.2e-12  Score=88.92  Aligned_cols=114  Identities=16%  Similarity=0.014  Sum_probs=76.7

Q ss_pred             eEEEEeC-CHHHHHHHHHHccCCeeeccC--CC------------CCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCC
Q 030972           16 HVSLVCR-NISESIDFYQNVLGFVPIRRP--GS------------FNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPK   80 (168)
Q Consensus        16 hv~l~v~-D~~~a~~FY~~~LG~~~~~~~--~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   80 (168)
                      +..|.|. |+++|++||+++||+++....  ..            .....+-+..++..+.+.... +..  .. ....+
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~-~~~--~~-~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNH-PAY--PY-EGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECC-TTS--CC-CCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCC-Ccc--CC-CCCCc
Confidence            5788898 999999999999999987531  10            011112233455555444321 100  00 11123


Q ss_pred             ceEEEEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           81 DNHLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        81 ~~hl~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                       .+++|.|+|   +++++++|+ +|.+++.++...+ ++.+.++|.||+|+.|+|.+..
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~-wG~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTF-WAASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEET-TEEEEEEEECTTSCEEEEEESC
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccC-cccceEEEECCCCCEEEEEEec
Confidence             689999998   789999985 7999887776654 4557799999999999999843

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.52  E-value=2.2e-13  Score=106.03  Aligned_cols=132  Identities=16%  Similarity=0.118  Sum_probs=97.9

Q ss_pred             CCCCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC----CCCcceeEEecCCcEEEEeecCCCCCCCCC---CCC
Q 030972            5 AGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG----SFNFDGAWLFGHGIGIHLLQSENPDSLPKK---SVI   77 (168)
Q Consensus         5 ~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~   77 (168)
                      .+....+++++||.|.|.|++++++||++.|||+.....+    .......++..++..+.|..+..+.+.+..   ...
T Consensus         3 ~~~~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~h   82 (393)
T 3isq_A            3 KPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKH   82 (393)
T ss_dssp             CCSSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHH
T ss_pred             CCCCCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhc
Confidence            3456778999999999999999999999999999987422    111123455566777888775444320110   023


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeee-CC-eeEEEEEEECCCCCEEEEEeeC
Q 030972           78 NPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEE-GG-ILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        78 ~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~-~g-~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +.+..|++|.|+|+++++++++++|++++.+|... .+ .......+++|+|..+.|++..
T Consensus        83 G~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~  143 (393)
T 3isq_A           83 GDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKM  143 (393)
T ss_dssp             CSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccc
Confidence            46789999999999999999999999999887543 22 2356688899999999999864

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.52  E-value=1.2e-13  Score=108.61  Aligned_cols=131  Identities=9%  Similarity=0.051  Sum_probs=95.2

Q ss_pred             CCCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC----CCCcceeEEecCCcEEEEeecCCCCC----CCC----
Q 030972            6 GNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG----SFNFDGAWLFGHGIGIHLLQSENPDS----LPK----   73 (168)
Q Consensus         6 ~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~----   73 (168)
                      ...|.+++++||.|.|+|++++++||++.|||+...+..    ......+++..++..+.|.....+..    .+.    
T Consensus        24 ~~~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~  103 (418)
T 1sp8_A           24 SDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFS  103 (418)
T ss_dssp             CCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCC
T ss_pred             CccccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCccccccccccccc
Confidence            346778999999999999999999999999999876532    11223344556667788876643311    000    


Q ss_pred             -C------CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           74 -K------SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        74 -~------~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                       .      ...+.+..|++|.|+|+++++++++++|+++...|....+ ......+.+|+|..++|++...
T Consensus       104 ~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~~  173 (418)
T 1sp8_A          104 AAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPD  173 (418)
T ss_dssp             HHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCT
T ss_pred             chhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccCC
Confidence             0      0123588999999999999999999999999887754322 1344667889999999998753

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.43  E-value=1.2e-12  Score=101.88  Aligned_cols=129  Identities=11%  Similarity=0.188  Sum_probs=87.1

Q ss_pred             CCCccceeeeEEEEeC--CHHHHHHHHHHccCCeeeccCC-------CCCcceeEEec--CCcEEEEeecCCCCCCCC--
Q 030972            7 NPLHLKSVNHVSLVCR--NISESIDFYQNVLGFVPIRRPG-------SFNFDGAWLFG--HGIGIHLLQSENPDSLPK--   73 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~-------~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~--   73 (168)
                      ....+.+|+|+++.|+  |++++++||+++|||+......       .......++..  +...+.+.+.........  
T Consensus       178 ~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~  257 (381)
T 1t47_A          178 AHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQID  257 (381)
T ss_dssp             SSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHH
T ss_pred             CCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHH
Confidence            3356789999999999  9999999999999999876531       11112233332  234677766542111100  


Q ss_pred             ---CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCe----------------eEEEEEEECCCCCEEEEEe
Q 030972           74 ---KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGI----------------LVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        74 ---~~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~----------------~~~~~~~~DPdG~~iel~~  134 (168)
                         ....+.|.+||||.|+|+++++++|+++|+++...|......                ....++-.||+|++++|.+
T Consensus       258 ~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift  337 (381)
T 1t47_A          258 EYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFT  337 (381)
T ss_dssp             HHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEB
T ss_pred             HHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEec
Confidence               001345789999999999999999999999988775432110                0012666788888888876


Q ss_pred             e
Q 030972          135 C  135 (168)
Q Consensus       135 ~  135 (168)
                      .
T Consensus       338 ~  338 (381)
T 1t47_A          338 K  338 (381)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.43  E-value=8e-12  Score=84.02  Aligned_cols=115  Identities=10%  Similarity=0.050  Sum_probs=75.2

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHcc-CCeeecc--CCC------CCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCc
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVL-GFVPIRR--PGS------FNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKD   81 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~L-G~~~~~~--~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   81 (168)
                      +.++....+.+.|.++|++||+++| |+++...  ...      .....+-+..++..+.+... .+ .   . .  .. 
T Consensus         3 ~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~-~~-~---~-~--~~-   73 (139)
T 1tsj_A            3 IPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDA-NS-G---T-E--LP-   73 (139)
T ss_dssp             CCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------------C-
T ss_pred             CCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECC-CC-C---C-C--ce-
Confidence            4456555555569999999999999 9998742  111      11111223344444333321 11 1   0 1  12 


Q ss_pred             eEEEEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           82 NHLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        82 ~hl~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ..|++.|+|   +++++++|. .|.+++.++.... ++.+..+++||+|+.|+|....
T Consensus        74 ~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~-wG~~~g~v~Dp~G~~W~i~~~~  129 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMP-PYREFAWVQDKFGVSFQLALPE  129 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEET-TEEEEEEEECTTSCEEEEEECC
T ss_pred             EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccC-CCceEEEEECCCCCEEEEeecc
Confidence            678889987   788899998 7999988776654 5567899999999999999854

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.40  E-value=1.6e-11  Score=85.21  Aligned_cols=120  Identities=15%  Similarity=0.114  Sum_probs=80.2

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeecc--CCC--------------CCcceeEEecCCcEEEEeecCCCCCCC
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRR--PGS--------------FNFDGAWLFGHGIGIHLLQSENPDSLP   72 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~--~~~--------------~~~~~~~~~~~~~~~~l~~~~~~~~~~   72 (168)
                      |++.++ ...|.++|.++|++||+++||+++...  ..+              ...-.+-+..++..+.+......  . 
T Consensus        22 mmm~~i-~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~--~-   97 (172)
T 3l20_A           22 FYMTAL-FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGR--A-   97 (172)
T ss_dssp             CCCCEE-EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTC--C-
T ss_pred             EecCcE-EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCC--C-
Confidence            444444 567777799999999999999997642  111              01122334556666666553211  1 


Q ss_pred             CCCCCCCCceEEEEEe--------CCHHHHHHHHHHcC-CeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           73 KKSVINPKDNHLSFQC--------ESVGNVEKFLKEMG-IKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        73 ~~~~~~~~~~hl~~~v--------~dl~~~~~~l~~~g-~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                         ...++...+++.+        +|+++++++|.+.| +++..++...+ ++.+..++.||+|+.|+|....
T Consensus        98 ---~~~~~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~-wG~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A           98 ---DKINNGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQF-WGGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             ---CCCCSSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECT-TSSEEEEEECTTSCEEEEEEEC
T ss_pred             ---CCCCCcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccC-CCcEEEEEECCCCCEEEEEeCC
Confidence               1122345666766        57899999999999 78887776543 3346689999999999998764

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.36  E-value=6e-13  Score=102.65  Aligned_cols=124  Identities=13%  Similarity=0.145  Sum_probs=87.8

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCC--CCCCCCceEE
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK--SVINPKDNHL   84 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hl   84 (168)
                      .+|.+.+++||.+.|+|++++.+|| +.|||+...+....  ...++..+...+.+..  .+.+....  ...+.+..|+
T Consensus         6 ~~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~--~~~l~~~g~~~l~l~~--~~~~~~~~~~~~~g~gv~~i   80 (357)
T 1cjx_A            6 NPMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK--NVHLYRQGEINLILNN--EPNSIASYFAAEHGPSVCGM   80 (357)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS--SEEEEEETTEEEEEEC--CSSSHHHHHHHHHSSEEEEE
T ss_pred             CCcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe--eEEEEecCCEEEEEEC--CCCchhhhhhhhcCCeEEEE
Confidence            4688999999999999999999999 68999988754311  2334445555555543  22110000  0123678999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           85 SFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        85 ~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +|.|+|+++++++++++|+++...+.. .|. .....+++|+|..++|++...
T Consensus        81 af~V~D~~~~~~~l~~~G~~~~~~~~~-~g~-~~~~~~~~~gg~~~~~vd~~~  131 (357)
T 1cjx_A           81 AFRVKDSQKAYNRALELGAQPIHIDTG-PME-LNLPAIKGIGGAPLYLIDRFG  131 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCCCCCC-TTC-BCCCEEECGGGCEEEEECCCS
T ss_pred             EEEeCCHHHHHHHHHHcCCEEeecCCC-CCc-EEEEeeeCCCCeEEEEECCCC
Confidence            999999999999999999998766532 221 133678899999999997653

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.35  E-value=8.1e-13  Score=101.92  Aligned_cols=103  Identities=15%  Similarity=0.172  Sum_probs=72.7

Q ss_pred             CCCccceeeeEEEEeC--CHHHHHHHHHHccCCeeeccCC-CCCc-----ceeEEecCCcEEEEeec-CCCCCCCC---C
Q 030972            7 NPLHLKSVNHVSLVCR--NISESIDFYQNVLGFVPIRRPG-SFNF-----DGAWLFGHGIGIHLLQS-ENPDSLPK---K   74 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~-~~~~-----~~~~~~~~~~~~~l~~~-~~~~~~~~---~   74 (168)
                      ....+.+|+|+++.|+  |++++++||+++|||+...... ....     ..++...+...++|.+. ........   .
T Consensus       152 ~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~  231 (357)
T 1cjx_A          152 VGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLM  231 (357)
T ss_dssp             CTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHH
T ss_pred             CCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHH
Confidence            4466889999999999  9999999999999999876431 0111     11222334557888776 32211100   0


Q ss_pred             CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEe-ee
Q 030972           75 SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVR-AL  109 (168)
Q Consensus        75 ~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~-~~  109 (168)
                      .....+.+|+||.|+|+++++++|+++|+++.. .|
T Consensus       232 ~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p  267 (357)
T 1cjx_A          232 QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPP  267 (357)
T ss_dssp             HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCC
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCC
Confidence            013457899999999999999999999999877 44

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.31  E-value=3e-10  Score=76.18  Aligned_cols=113  Identities=13%  Similarity=0.064  Sum_probs=76.3

Q ss_pred             eEEEEeC-CHHHHHHHHHHccC-Ceeecc--CC------CCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEE
Q 030972           16 HVSLVCR-NISESIDFYQNVLG-FVPIRR--PG------SFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLS   85 (168)
Q Consensus        16 hv~l~v~-D~~~a~~FY~~~LG-~~~~~~--~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   85 (168)
                      ...|.++ |.++|++||+++|| .++...  ..      ....-.+-+..++..+.+........     ...+....++
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~-----~~~~~~~~l~   86 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHN-----FTFTPAMSLY   86 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCS-----CCCCTTSCEE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCC-----CCCCCCEEEE
Confidence            4566667 89999999999999 565421  11      11112344455666666654322111     1122347899


Q ss_pred             EEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           86 FQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        86 ~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +.|+|   +++++++|. .|.++..++...+ ++.+..++.||+|+.|+|...
T Consensus        87 l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~-wg~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           87 VTCETEEEIDTVFHKLA-QDGAILMPLGSYP-FSKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EEESSHHHHHHHHHHHH-TTCEEEEEEEEET-TEEEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHH-cCCeEecCccccc-CCcEEEEEECCCCCEEEEEeC
Confidence            99999   999999995 5888887776654 455779999999999999863

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.27  E-value=1.6e-10  Score=83.55  Aligned_cols=111  Identities=16%  Similarity=0.041  Sum_probs=74.9

Q ss_pred             eeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEE--eecCCCCCCCCCCCCCCCceEE---EEEe
Q 030972           14 VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHL--LQSENPDSLPKKSVINPKDNHL---SFQC   88 (168)
Q Consensus        14 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~hl---~~~v   88 (168)
                      ..+..|.|.|+++.++||+++|||++..+..    ..+.+..++....|  -+.+....     ....|..|+   ++.+
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~----~~a~lg~~~~~~~L~lEEsp~~~~-----~~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES----AFLSLGDQTGLEKLVLEEAPSMRT-----RKVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS----SEEEEECTTCCEEEEEEECCTTTC-----BCCCSSCSEEEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC----cEEEeecCCCcceEEEEeCCCccc-----ccccccceeeeEEEEc
Confidence            4578899999999999999999999988766    45556554433223  33222111     223577777   5999


Q ss_pred             CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           89 ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        89 ~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++.+++.+-|.. +.++.....   |...+++|+.||+||.|||...+.
T Consensus        82 p~~~el~~lL~~-~~~~~~~~~---gdhgyA~yl~dPEGn~ieiyae~d  126 (244)
T 3e0r_A           82 ENPLEIEGILSK-TDSIHRLYK---GQNGYAFEIFSPEDDLILIHAEDD  126 (244)
T ss_dssp             SSHHHHHHHHTT-CSCCSEEEE---CSSSEEEEEECTTCCEEEEECCSC
T ss_pred             CCHHHHHHHHhc-ccccccccc---cCCcEEEEEECCCCCeEEEEEcCC
Confidence            987777666665 444421111   222357999999999999998654

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.20  E-value=3.6e-11  Score=94.66  Aligned_cols=103  Identities=10%  Similarity=0.120  Sum_probs=73.6

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC-------CcceeEEe--cCCcEEEEeecCC---CCCCCCC
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF-------NFDGAWLF--GHGIGIHLLQSEN---PDSLPKK   74 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-------~~~~~~~~--~~~~~~~l~~~~~---~~~~~~~   74 (168)
                      ....+.+|+|+++.|+|++++++||+++|||+...+....       .....++.  .+...+.+.+...   ..+....
T Consensus       196 ~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~  275 (424)
T 1sqd_A          196 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT  275 (424)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhh
Confidence            3456789999999999999999999999999988754211       12233443  2345777777642   1111101


Q ss_pred             C---CCCCCceEEEEEeCCHHHHHHHHHH----cCCeEEeee
Q 030972           75 S---VINPKDNHLSFQCESVGNVEKFLKE----MGIKYVRAL  109 (168)
Q Consensus        75 ~---~~~~~~~hl~~~v~dl~~~~~~l~~----~g~~~~~~~  109 (168)
                      .   ..+.|.+||||.|+|+.++.++|++    +|+++...|
T Consensus       276 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          276 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             hhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            0   1356899999999999999999999    899998764

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.19  E-value=5.2e-11  Score=92.75  Aligned_cols=103  Identities=11%  Similarity=0.172  Sum_probs=73.6

Q ss_pred             CCCccceeeeEEEEeCC--HHHHHHHHHHccCCeeeccCC----CCCc---ceeEEe--cCCcEEEEeecCCCCC-CCC-
Q 030972            7 NPLHLKSVNHVSLVCRN--ISESIDFYQNVLGFVPIRRPG----SFNF---DGAWLF--GHGIGIHLLQSENPDS-LPK-   73 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D--~~~a~~FY~~~LG~~~~~~~~----~~~~---~~~~~~--~~~~~~~l~~~~~~~~-~~~-   73 (168)
                      +...+++|+|+++.|+|  ++++++||+++|||+..+...    ...+   ....+.  .+...+.|.++..... ... 
T Consensus       167 ~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~  246 (393)
T 3isq_A          167 PKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQ  246 (393)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHH
T ss_pred             CCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHH
Confidence            34568999999999998  999999999999999876421    1111   122232  2335788887654111 110 


Q ss_pred             C---CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeee
Q 030972           74 K---SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRAL  109 (168)
Q Consensus        74 ~---~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~  109 (168)
                      .   ...+.|.+||||.|+|+.+++++|+++|+++...|
T Consensus       247 ~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          247 EYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             HHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence            0   01356899999999999999999999999988764

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.17  E-value=5.7e-11  Score=93.38  Aligned_cols=103  Identities=11%  Similarity=0.158  Sum_probs=73.6

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC-------CCcceeEEec--CCcEEEEeecCCC---CCCCCC
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS-------FNFDGAWLFG--HGIGIHLLQSENP---DSLPKK   74 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-------~~~~~~~~~~--~~~~~~l~~~~~~---~~~~~~   74 (168)
                      ....+.+|+|+++.|+|++++++||+++|||+.......       .+....++..  +...+.+.++...   .+....
T Consensus       193 ~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~  272 (418)
T 1sp8_A          193 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT  272 (418)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHH
T ss_pred             CCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhh
Confidence            335578999999999999999999999999998765321       1123345543  3356777665421   111000


Q ss_pred             C---CCCCCceEEEEEeCCHHHHHHHHHH----cCCeEEeee
Q 030972           75 S---VINPKDNHLSFQCESVGNVEKFLKE----MGIKYVRAL  109 (168)
Q Consensus        75 ~---~~~~~~~hl~~~v~dl~~~~~~l~~----~g~~~~~~~  109 (168)
                      .   ..+.|.+||||.|+|++++.++|++    +|+++...|
T Consensus       273 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          273 FLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            0   1356899999999999999999999    799998765

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.49  E-value=6.7e-07  Score=75.65  Aligned_cols=124  Identities=21%  Similarity=0.292  Sum_probs=76.8

Q ss_pred             ccceeeeEEEEe---CCHHHHHHHHHHccCCeeeccCCCCCcceeEEe--cCCcEEEEeecCCCC--------------C
Q 030972           10 HLKSVNHVSLVC---RNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF--GHGIGIHLLQSENPD--------------S   70 (168)
Q Consensus        10 ~~~~l~hv~l~v---~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~--------------~   70 (168)
                      .+.+...+.+..   ..+++++.||.++|++.........-+ .+++.  .+...+.+.......              .
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (941)
T 3opy_B            6 LFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSNQKLF-WLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNLTR   84 (941)
T ss_dssp             CSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCSCCC----EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC-
T ss_pred             eecceeEEEEEeCCHHHHHHHHHHHHhhccceeccccCCcce-eEEEecCCCeEEEEEEeccccchhHHHHHHHHhhhhc
Confidence            345666666655   678999999999999987765442111 23331  223355554331111              0


Q ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           71 LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        71 ~~~~~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ........+...|+.|.+.|++++.+.|.+.+.++...|-... .  ..+|..||+||.|+|.+..+
T Consensus        85 ~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~-~--~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           85 SLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEIS-P--FEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             ---------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCS-C--EEECCSSCCEEEECC-CCSS
T ss_pred             ccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCC-C--ceEEeECCCCCEEEEeccCC
Confidence            0011122334469999999999999999999988765543222 2  45999999999999999987

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.39  E-value=8.9e-06  Score=55.71  Aligned_cols=103  Identities=13%  Similarity=0.051  Sum_probs=67.5

Q ss_pred             eEEEEeC-CHHHHHHHHHHcc-CCeeec--cCCC-------CCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972           16 HVSLVCR-NISESIDFYQNVL-GFVPIR--RPGS-------FNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus        16 hv~l~v~-D~~~a~~FY~~~L-G~~~~~--~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      ...|..+ |.++|++||+++| |.++..  +.++       ...-.+-+..++..+.+.... +..     . ......+
T Consensus         8 ~PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~-p~~-----~-~~~~~sl   80 (163)
T 1u69_A            8 TICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGG-PAF-----R-HSEAFSF   80 (163)
T ss_dssp             EEEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECC-TTC-----C-CCTTEEE
T ss_pred             eEEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCC-CCc-----C-CCCceEE
Confidence            4456666 9999999999999 998763  2211       112223344555555554321 111     1 1233578


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           85 SFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        85 ~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      .+.|+|   +++++++|.+.|.++.     ..      ..++||.|+.|.|....
T Consensus        81 ~v~~~d~~e~d~~~~~L~~~Gg~v~-----~~------G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           81 QVATDDQAETDRLWNAIVDNGGEES-----AC------GWCRDKWGISWQITPRV  124 (163)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCEEC-----ST------TEEECTTSCEEEEEEHH
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCEEE-----EE------EEEECCCCCEEEEEeEc
Confidence            888887   6778899987888876     22      46999999999999743

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=97.70  E-value=8.4e-05  Score=55.05  Aligned_cols=91  Identities=10%  Similarity=0.062  Sum_probs=62.6

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccC-----CeeeccC--CCCCcceeEEecCCcEEEEeecCCCCC-----------
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLG-----FVPIRRP--GSFNFDGAWLFGHGIGIHLLQSENPDS-----------   70 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG-----~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------   70 (168)
                      -|+.+|+|+++.|.+++        .||     |.+....  ..++-....+..++..++++.......           
T Consensus        20 ~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~YLElIai~~~~~~~~~~~~~~~~   91 (274)
T 3p8a_A           20 HMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGG   91 (274)
T ss_dssp             -CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSSEEEEEEESCHHHHHHHTTSTGGG
T ss_pred             CccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCEEEEEEeecCcccccccccccCcc
Confidence            34679999999999884        367     7765521  112223333444888999998765320           


Q ss_pred             -CCCC----CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEe
Q 030972           71 -LPKK----SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVR  107 (168)
Q Consensus        71 -~~~~----~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~  107 (168)
                       ....    ...+.|+.++++.++|+++..++|.++|+....
T Consensus        92 ~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A           92 VAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             TCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             chHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence             0000    133568999999999999999999999998754

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=97.40  E-value=0.002  Score=47.01  Aligned_cols=34  Identities=6%  Similarity=0.066  Sum_probs=30.9

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccC
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRP   43 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~   43 (168)
                      ..+.+++||+|.|+|++++.+|| +.|||+...+.
T Consensus       154 ~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~~  187 (252)
T 3pkv_A          154 DQLLSIGEINITTSDVEQAATRL-KQAELPVKLDQ  187 (252)
T ss_dssp             GGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGGG
T ss_pred             HHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccCC
Confidence            45789999999999999999999 89999988763

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=97.22  E-value=0.00039  Score=50.28  Aligned_cols=91  Identities=11%  Similarity=0.160  Sum_probs=59.9

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC--
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE--   89 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~--   89 (168)
                      -.+ ||.|.|.|.+++  ||++ +|+                   +.++.+++...++ .+.......+.-.+.|.++  
T Consensus       151 fti-~I~LnV~d~~~s--Fy~~-~~~-------------------~~~~~F~~a~G~d-l~~~~~~t~gLe~l~~~v~~~  206 (244)
T 3e0r_A          151 FEI-SMELHLPTDIES--FLES-SEI-------------------GASLDFIPAQGQD-LTVDNTVTWDLSMLKFLVNEL  206 (244)
T ss_dssp             EEE-EEEEEECTTCCC--SCCH-HHH-------------------TTTEEEEECCCTT-TTCCTTSBSSEEEEEEEESSC
T ss_pred             cEE-EEEEEcCchHHH--Hhhc-cCC-------------------cccEEEEcccCCC-CCCCCCCccCceEEEEEeCHH
Confidence            347 999999999998  9986 444                   1123333333322 2222233457778888776  


Q ss_pred             CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           90 SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        90 dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      |++++.++|+++|.-+..     . .  ..+.+.||.|+.|-|.+
T Consensus       207 dl~~l~~~L~~~g~~idk-----k-~--~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          207 DIASLRQKFESTEYFIPK-----S-E--KFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             CHHHHHHHTTTSCEECCT-----T-C--CEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHHhCCceEcc-----c-C--CEEEEECCCCCEEEEEE
Confidence            788999999988773311     1 1  23888999999998864

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=95.42  E-value=0.1  Score=33.06  Aligned_cols=58  Identities=19%  Similarity=0.288  Sum_probs=41.3

Q ss_pred             CCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           79 PKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .++.|+++.|+|++++.+..+..|.+.............+.+++.. +|..+||++...
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~   63 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPDG   63 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEESS
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecCC
Confidence            4689999999999999999987799886543222222233455554 678899998654

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=94.42  E-value=0.07  Score=35.24  Aligned_cols=53  Identities=15%  Similarity=0.264  Sum_probs=37.1

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEec-C--CcEEEEeec
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFG-H--GIGIHLLQS   65 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~--~~~~~l~~~   65 (168)
                      .+++|++|.|+|++++.+..++ .|.++.......+...+|+.. +  +..++|++.
T Consensus       103 ~g~~Hiaf~v~di~~~~~~l~~-~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A          103 EGIHHIAFVVKDMDRKVEELYR-KGMKVIQKGDFEGGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCcEeeccccCCeeEEEEeccccCcEEEEEEec
Confidence            4789999999999999999998 899886543212223344432 2  567887764

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=93.92  E-value=0.64  Score=28.79  Aligned_cols=58  Identities=16%  Similarity=0.222  Sum_probs=42.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNL  138 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~~  138 (168)
                      .+.|+++.|.|++++.+..++ .|.+......... .....+++..++|..++|.+....
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~   61 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKT-KGFNSYFLSFEDGARLEIMSRTDV   61 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGG-GTEEEEEEECSSSCEEEEEEETTC
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCC-CCccEEEEEcCCCcEEEEEecCCC
Confidence            568999999999999999966 5998865432211 123446777667999999987653

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=93.78  E-value=0.19  Score=33.33  Aligned_cols=58  Identities=17%  Similarity=0.279  Sum_probs=41.8

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeecc-CC--CCCcceeEE---ecCCcEEEEeecCCCCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRR-PG--SFNFDGAWL---FGHGIGIHLLQSENPDS   70 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~-~~--~~~~~~~~~---~~~~~~~~l~~~~~~~~   70 (168)
                      .++.|++|.|+|++++.+-.++ .|.++... ..  ..+....|+   ..+|..++|++......
T Consensus        78 ~g~~Hiaf~V~Did~~~~~l~~-~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~~~  141 (161)
T 3oa4_A           78 EGIHHIAIGVKSIEERIQEVKE-NGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQAE  141 (161)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCCCC
T ss_pred             CCeEEEEEEECCHHHHHHHHHH-CCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCccc
Confidence            4789999999999999999997 89887654 21  112234455   44677899998776543

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=93.63  E-value=0.38  Score=35.44  Aligned_cols=36  Identities=11%  Similarity=0.130  Sum_probs=31.7

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG   44 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~   44 (168)
                      .-..+|.+|.+.++|.+++++.|+++||.+...+.+
T Consensus       186 nGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~~  221 (274)
T 3p8a_A          186 QKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEND  221 (274)
T ss_dssp             CTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEECS
T ss_pred             CccceEEEEEEEeCCHHHHHHHHHHHhCCCccccCC
Confidence            345799999999999999999999999999876554

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=93.38  E-value=0.54  Score=29.28  Aligned_cols=56  Identities=16%  Similarity=0.187  Sum_probs=39.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++.|+++.|.|+++..+..++ .|.++........ .....+++.. +|..++|++...
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~-~~~~~~l~~~~~   61 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPE-HGVSVVFVNL-GNTKMELLHPLG   61 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGG-GTEEEEEEEC-SSSEEEEEEECS
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCC-CCEEEEEEec-CCEEEEEEecCC
Confidence            578999999999999999998 7999865432211 1223345544 678899988654

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=92.82  E-value=0.78  Score=28.24  Aligned_cols=56  Identities=16%  Similarity=0.152  Sum_probs=39.4

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           79 PKDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      .++.|+++.|.|+++..+..++ .|.++........ ...+.+++.-+++ .++|....
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~-~l~l~~~~   60 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPE-KNDIKLDLKLGSQ-ELEIFISD   60 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGG-GTEEEEEEEETTE-EEEEEECT
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCC-CcceEEEEecCCe-EEEEEecc
Confidence            3678999999999999999987 7999865432211 1223355665566 89998754

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=92.76  E-value=1  Score=28.87  Aligned_cols=56  Identities=29%  Similarity=0.414  Sum_probs=40.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeEEeeeeee----------CCeeEEEEEEECCCC-CEEEEEee
Q 030972           80 KDNHLSFQCESVGNVEKFLKEMGIKYVRALVEE----------GGILVEQLFFHDPDG-FMIEICDC  135 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~----------~g~~~~~~~~~DPdG-~~iel~~~  135 (168)
                      ++.|+++.|.|++++.+..++.|.++.......          .......+++.-++| ..+||++.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            678999999999999998888899886432210          112334577777766 78999875

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=92.68  E-value=0.96  Score=28.04  Aligned_cols=54  Identities=13%  Similarity=0.136  Sum_probs=38.9

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           79 PKDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      .++.|+++.|.|+++..+..++ .|.++........+ ..+.+++... +..++|..
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~-~~~l~l~~   58 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKR-HDYKLDLKCG-DIELEIFG   58 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTT-TEEEEEEEET-TEEEEEEE
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCC-cceEEEEecC-CeEEEEEe
Confidence            3678999999999999999977 69998765433222 2233555554 44899988

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=92.48  E-value=2.2  Score=36.86  Aligned_cols=52  Identities=17%  Similarity=0.254  Sum_probs=38.6

Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           81 DNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        81 ~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ...+.|.+.|+..+.+.|.+..++.  .|....   -..+|..||=||.|.|....+
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~dp~~~~~~~~~~~~  175 (989)
T 3opy_A          124 PGEVTFFTASIDKLKAKLIEIGAEI--IPSKID---LVEFSTRDPMGDVISFSSYPS  175 (989)
T ss_dssp             SCEEEEECSCHHHHHHHHHHSSCCB--CCCC-----CCCEEEESSSEEEEECCSSSC
T ss_pred             cceEEEEeCcHHHHHHHhhhccccc--CCCCCC---ceeEEEecCCCCEEeeecCCC
Confidence            3578999999999999999873332  221111   134999999999999999887

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=92.07  E-value=0.7  Score=31.14  Aligned_cols=55  Identities=13%  Similarity=0.262  Sum_probs=39.2

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCc-ce-eEEecCCcEEEEeecCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNF-DG-AWLFGHGIGIHLLQSEN   67 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~~~~   67 (168)
                      .+++|+.|.|.|++++.+-.++ .|.++......... .. .+...++..++|++...
T Consensus       126 ~g~~hl~f~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  182 (187)
T 3vw9_A          126 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNK  182 (187)
T ss_dssp             CBEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSSSTTCEEEECTTCCEEEEECGGG
T ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEeeCCccCCcceEEEEECCCCCEEEEEEccc
Confidence            3788999999999999999997 89988765432222 12 33345577888887543

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=91.93  E-value=1.3  Score=28.11  Aligned_cols=58  Identities=12%  Similarity=0.201  Sum_probs=42.1

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCC-----CEEEEEeeCC
Q 030972           79 PKDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDG-----FMIEICDCDN  137 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG-----~~iel~~~~~  137 (168)
                      .++.|+.+.|.|++++.+..++ .|.++........ .....+++..+++     ..++|++...
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~l~l~~~~~   71 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPE-QGVVEIMMAPAAKLTEHMTQVQVMAPLN   71 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETT-TTEEEEEEESSSSCCTTCCEEEEEEESS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCC-CCeEEEEEEcCCCCcCcceEEEEeecCC
Confidence            3679999999999999999886 6999865432211 1224477777775     7899998653

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=91.66  E-value=1.2  Score=27.08  Aligned_cols=52  Identities=21%  Similarity=0.412  Sum_probs=39.0

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++.|+.+.|.|+++..+..++ .|.++....    +...  +++..++|..+++.+...
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~~--~~~~~~~~~~l~l~~~~~   55 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR----GNAF--AVMRDNDGFILTLMKGKE   55 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE----TTTE--EEEECTTCCEEEEEECSS
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccC----CCcE--EEEEcCCCcEEEEEeCCC
Confidence            578999999999999999987 699886431    1122  566666788899887543

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=91.53  E-value=0.62  Score=29.05  Aligned_cols=53  Identities=13%  Similarity=0.077  Sum_probs=35.9

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEE-ecCCcEEEEeec
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWL-FGHGIGIHLLQS   65 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~   65 (168)
                      .+..|++|.|+|++++.+..++ .|.++.......+....++ ..++..+++++.
T Consensus        71 ~~~~~~~f~v~d~~~~~~~l~~-~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  124 (126)
T 2qqz_A           71 AKRAHPAFYVLKIDEFKQELIK-QGIEVIDDHARPDVIRFYVSDPFGNRIEFMEN  124 (126)
T ss_dssp             CSSSCEEEEETTHHHHHHHHHH-TTCCCEEECSSTTEEEEEEECTTSCEEEEEEE
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-cCCCccCCCCCCCeeEEEEECCCCCEEEEEeC
Confidence            3578999999999999999997 7888765443222223333 345667777664

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=90.55  E-value=1.4  Score=29.62  Aligned_cols=54  Identities=15%  Similarity=0.321  Sum_probs=37.5

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCC-cceeEE-ecCCcEEEEeecC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFN-FDGAWL-FGHGIGIHLLQSE   66 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~~~-~~~~~~~~l~~~~   66 (168)
                      .++.|++|.|+|++++.+..++ .|.++........ ....|+ ..++..++|++..
T Consensus       123 ~g~~hi~f~v~dvd~~~~~l~~-~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          123 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-CCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            4678999999999999999998 7988766433211 122333 4456778887654

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=90.43  E-value=1.6  Score=27.08  Aligned_cols=29  Identities=21%  Similarity=0.307  Sum_probs=25.6

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeec
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIR   41 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~   41 (168)
                      ....|+.|.|.|++++.+-..+ .|.++..
T Consensus        78 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~  106 (133)
T 4hc5_A           78 GGYTGISLITRDIDEAYKTLTE-RGVTFTK  106 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH-TTCEESS
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEeec
Confidence            4678999999999999999997 7998865

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=90.39  E-value=0.52  Score=30.39  Aligned_cols=57  Identities=16%  Similarity=0.297  Sum_probs=42.9

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHH-cCCeEEeeeee--------eCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           78 NPKDNHLSFQCESVGNVEKFLKE-MGIKYVRALVE--------EGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        78 ~~~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~--------~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ..++.|+++.|.|++++.+..++ .|.++......        ..+   ..+++.-.+|..++|.+...
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~   82 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG---KVANFITPDGTILDLFGEPE   82 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT---SEEEEECTTSCEEEEEECTT
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC---cEEEEEeCCCCEEEEEecCC
Confidence            35789999999999999999998 69998753111        122   22667777889999998765

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=89.76  E-value=1.6  Score=27.91  Aligned_cols=51  Identities=12%  Similarity=-0.011  Sum_probs=34.3

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcce-eEEecCCcEEEEeec
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDG-AWLFGHGIGIHLLQS   65 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~   65 (168)
                      .++.|+.|.|+|++++.+...+ .|.++... . ..... .+...++..+++++.
T Consensus        76 ~~~~h~~f~v~d~~~~~~~l~~-~G~~~~~~-~-g~~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           76 EAYGHIAIGVEDVKELVADMRK-HDVPIDYE-D-ESGFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             SSEEEEEEEESCHHHHHHHHHH-TTCCEEEE-C-SSSSEEEEECTTSCEEEEEEH
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecc-C-CcEEEEEEECCCCCEEEEEEc
Confidence            4678999999999999999987 78887655 1 11122 223345566666653

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=89.51  E-value=0.7  Score=30.22  Aligned_cols=55  Identities=16%  Similarity=0.109  Sum_probs=36.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCcEEEEeecCCC
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSENP   68 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~   68 (168)
                      ++.|+.|.|+|++++.+-.++ .|.++.....  .......+...+|..++|++...+
T Consensus        98 g~~~l~f~VdDvda~~~~l~~-~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~~d  154 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSA-LGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIAYD  154 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHH-TTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC---
T ss_pred             CceEEEeeechhhhhhhHHhc-CCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEECCC
Confidence            456899999999999999997 8888754322  122222233456778888886543

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=89.31  E-value=2.8  Score=26.36  Aligned_cols=55  Identities=13%  Similarity=0.137  Sum_probs=38.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++.|+.+.|.|++++.+..++ .|.++........ .....+++ . +|..++|.+...
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~-~-~~~~l~l~~~~~   60 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDT-TSFAHGVL-P-GGLSIVLREHDG   60 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSS-EEEEEEEC-T-TSCEEEEEEETT
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCC-CceEEEEE-c-CCCEEEEEeCCC
Confidence            568999999999999999877 6998865432111 12222334 4 788999998754

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=88.07  E-value=3.6  Score=26.22  Aligned_cols=55  Identities=7%  Similarity=0.047  Sum_probs=38.7

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           78 NPKDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        78 ~~~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ..++.|+++.|.|+++..+..++ .|.++.....  .+ .. .++..+..+..++|.+..
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~-~~-~~~~~~~~~~~l~l~~~~   81 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--AR-RW-NFLWVSGRAGMVVLQEEK   81 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TT-TE-EEEEETTTTEEEEEEECC
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CC-cE-EEEEecCCCcEEEEeccC
Confidence            35789999999999999999977 6999865431  11 11 123334467888888763

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=87.82  E-value=3.4  Score=25.60  Aligned_cols=56  Identities=14%  Similarity=0.095  Sum_probs=39.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCC---CCEEEEEeeC
Q 030972           80 KDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPD---GFMIEICDCD  136 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPd---G~~iel~~~~  136 (168)
                      .+.|+.+.|.|+++..+..++ .|.++........+ ....+++.-++   |..++|....
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~   61 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEY-KYSLAFVGYGPETEEAVIELTYNW   61 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTT-TEEEEEEESSCTTTSCEEEEEEET
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCC-ceEEEEEecCCCCCCcEEEEEEcC
Confidence            468999999999999999987 69998754332222 22335555443   7889998754

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=87.57  E-value=1.8  Score=27.26  Aligned_cols=30  Identities=7%  Similarity=0.076  Sum_probs=24.2

Q ss_pred             ceeeeEEEEeC--CHHHHHHHHHHccCCeeecc
Q 030972           12 KSVNHVSLVCR--NISESIDFYQNVLGFVPIRR   42 (168)
Q Consensus        12 ~~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~   42 (168)
                      .++.|++|.|.  |++++.+-..+ .|.++...
T Consensus        60 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~   91 (135)
T 1nki_A           60 ADYTHYAFGIAAADFARFAAQLRA-HGVREWKQ   91 (135)
T ss_dssp             SSSCEEEEEECHHHHHHHHHHHHH-TTCCEEEC
T ss_pred             CCcceEEEEccHHHHHHHHHHHHH-CCCceecC
Confidence            35789999997  89988888887 78877654

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=87.36  E-value=3.5  Score=31.24  Aligned_cols=51  Identities=16%  Similarity=0.117  Sum_probs=37.9

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeC-C--------eeEEEEEEECCCCC
Q 030972           78 NPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEG-G--------ILVEQLFFHDPDGF  128 (168)
Q Consensus        78 ~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~-g--------~~~~~~~~~DPdG~  128 (168)
                      +..++|+..+|.|++++.+.++++|+++.......+ +        .....+.|.|.+|.
T Consensus       233 G~~iNHlT~rv~DId~v~~~m~~~G~~~k~~IeGsP~~lLrQTSf~A~~e~v~F~d~~G~  292 (340)
T 3iuz_A          233 GNAFNHATDRVDDVFGLSEQQXALGRPMXDXVEVSGSGRVXQTAFRADTVRRQFIGAQGE  292 (340)
T ss_dssp             TTSCSEEEEECSCHHHHHHHHHHTTCCBCSCCEECTTSSEEEEEBCCCEEEEEEECTTSC
T ss_pred             CCccccccCCcCCHHHHHHHHHHcCCChhhhhcCCcccceeeeeccccceEEEEecCCCc
Confidence            468899999999999999999999998765432211 1        12355778888874

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=86.51  E-value=2.3  Score=27.00  Aligned_cols=31  Identities=6%  Similarity=0.099  Sum_probs=24.7

Q ss_pred             cceeeeEEEEeC--CHHHHHHHHHHccCCeeecc
Q 030972           11 LKSVNHVSLVCR--NISESIDFYQNVLGFVPIRR   42 (168)
Q Consensus        11 ~~~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~   42 (168)
                      ..++.|+.|.|.  |++++.+-.++ .|.++...
T Consensus        62 ~~~~~hi~~~v~~~d~~~~~~~l~~-~G~~~~~~   94 (141)
T 1npb_A           62 ESDYTHYAFTVAEEDFEPLSQRLEQ-AGVTIWKQ   94 (141)
T ss_dssp             GSCSCEEEEECCHHHHHHHHHHHHH-TTCCEEEC
T ss_pred             CCCceEEEEEeCHHHHHHHHHHHHH-CCCeEecc
Confidence            346789999997  89998888887 78877654

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=84.40  E-value=2.6  Score=27.20  Aligned_cols=55  Identities=13%  Similarity=0.155  Sum_probs=37.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCcEEEEeecCCC
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSENP   68 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~   68 (168)
                      +..|+.|.|+|++++.+-.++ .|.++.....  ..+....+...+|..++|++....
T Consensus        65 ~~~hl~f~V~d~d~~~~~l~~-~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           65 RNTQATFLVDSLDKFKTFLEE-NGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             GGCCEEEEESCHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEECTTSCEEEEEEECC-
T ss_pred             cceEEEEEeCCHHHHHHHHHH-cCCEEecCCccCCCceEEEEECCCCCEEEEEEcCCc
Confidence            347999999999999999987 8988765321  122222233456778899887654

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=83.69  E-value=1.6  Score=27.07  Aligned_cols=55  Identities=9%  Similarity=0.111  Sum_probs=35.9

Q ss_pred             cceeeeEEEEeCC-HHHHHHHHHHccCCeeeccCCC--C--C-cceeE-EecCCcEEEEeecC
Q 030972           11 LKSVNHVSLVCRN-ISESIDFYQNVLGFVPIRRPGS--F--N-FDGAW-LFGHGIGIHLLQSE   66 (168)
Q Consensus        11 ~~~l~hv~l~v~D-~~~a~~FY~~~LG~~~~~~~~~--~--~-~~~~~-~~~~~~~~~l~~~~   66 (168)
                      -.+..|+.|.|.| ++++.+..++ .|.++......  .  + ....+ ...++..+++++..
T Consensus        70 ~~~~~~~~~~v~dd~~~~~~~l~~-~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           70 RVGSADLCFITDTVLSDAMKHVED-QGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             CTTCCEEEEECSSCHHHHHHHHHH-TTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             CCCccEEEEEeCcHHHHHHHHHHH-CCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            3467899999997 9999999998 78887643210  0  0 11222 23456677777754

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=83.58  E-value=1.8  Score=27.42  Aligned_cols=53  Identities=11%  Similarity=0.058  Sum_probs=33.3

Q ss_pred             eeeeEEEEeCCH---HHHHHHHHHccCCeeeccCC--CCCcceeEEecCCcEEEEeecC
Q 030972           13 SVNHVSLVCRNI---SESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGIGIHLLQSE   66 (168)
Q Consensus        13 ~l~hv~l~v~D~---~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~   66 (168)
                      ++.|++|.|+|+   +++.+..++ .|.++.....  .......+...++..+++++..
T Consensus        77 ~~~hi~~~v~d~~~l~~~~~~l~~-~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           77 PDSLLVFYVPNAVELAAITSKLKH-MGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             TTCEEEEECCCHHHHHHHHHHHHH-TTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             CccEEEEEeCCcchHHHHHHHHHH-cCCcCcCCCCcccCCCCeEEECCCCCEEEEEEcC
Confidence            467999999999   777777776 7887662111  0011123334566788887653

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=82.93  E-value=2  Score=28.16  Aligned_cols=55  Identities=7%  Similarity=-0.031  Sum_probs=35.0

Q ss_pred             ceeeeEEEEe---CCHHHHHHHHHHccCCeeeccCCC-CCcceeE-EecCCcEEEEeecCC
Q 030972           12 KSVNHVSLVC---RNISESIDFYQNVLGFVPIRRPGS-FNFDGAW-LFGHGIGIHLLQSEN   67 (168)
Q Consensus        12 ~~l~hv~l~v---~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~-~~~~~~~~~l~~~~~   67 (168)
                      .++.|++|.|   .|++++.+-.++ .|.++...... .....++ ...+|..++|++...
T Consensus        75 ~g~~hi~f~V~~~~dld~~~~~l~~-~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  134 (160)
T 3r4q_A           75 VGQGHFCFYADDKAEVDEWKTRFEA-LEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGKL  134 (160)
T ss_dssp             EEECEEEEEESSHHHHHHHHHHHHT-TTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGGG
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHH-CCCEEeccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence            4679999999   777777777776 68776532211 1122333 345577888887554

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=82.64  E-value=3.8  Score=25.84  Aligned_cols=30  Identities=17%  Similarity=0.217  Sum_probs=25.0

Q ss_pred             ceeeeEEEEeC--CHHHHHHHHHHccCCeeecc
Q 030972           12 KSVNHVSLVCR--NISESIDFYQNVLGFVPIRR   42 (168)
Q Consensus        12 ~~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~   42 (168)
                      .++.|++|.|.  |++++.+...+ .|.++...
T Consensus        65 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~   96 (139)
T 1r9c_A           65 RSYNHIAFKIDDADFDRYAERVGK-LGLDMRPP   96 (139)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHHHH-HTCCBCCC
T ss_pred             CCeeEEEEEcCHHHHHHHHHHHHH-CCCcccCC
Confidence            46789999999  99999999987 78876654

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=82.04  E-value=2.8  Score=25.51  Aligned_cols=51  Identities=20%  Similarity=0.186  Sum_probs=32.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEE-ecCCcEEEEee
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWL-FGHGIGIHLLQ   64 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~-~~~~~~~~l~~   64 (168)
                      ...|+.|.|+|++++.+..++ .|.++.....  ..+....++ ..++..+++++
T Consensus        64 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  117 (119)
T 2pjs_A           64 DVPDLSIEVDNFDEVHARILK-AGLPIEYGPVTEAWGVQRLFLRDPFGKLINILS  117 (119)
T ss_dssp             CCCSEEEEESCHHHHHHHHHH-TTCCCSEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCccccCCccCCCccEEEEEECCCCCEEEEEe
Confidence            467999999999999999987 7877654321  112122333 34456666665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	168
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	4e-18
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	5e-17
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	1e-16
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	8e-16
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-15
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	9e-15
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	9e-14
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-13
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	5e-13
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	8e-13
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	2e-12
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-12
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	5e-12
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	8e-12
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	2e-11
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	2e-11
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	1e-10
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	4e-10
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	1e-09
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	1e-09
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-09
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	3e-09
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	4e-09
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	5e-08
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	3e-07
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	4e-07
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	1e-06
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	2e-06
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	3e-06
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	5e-05
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	1e-04

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.0 bits (183), Expect = 4e-18
 Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 28/153 (18%)

Query: 15  NHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSL--- 71
               L  ++  +S+DFY  VLG   I++        +  F      + +  E  + +   
Sbjct: 25  QQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWA 84

Query: 72  --------------------PKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRA 108
                                     N           +V +V       +E+G+K+V+ 
Sbjct: 85  LSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 144

Query: 109 LVEEGGILVEQLFFHDPDGFMIEICDCDNLPVV 141
             +         F  DPDG+ IEI + + +  +
Sbjct: 145 PDDGKM--KGLAFIQDPDGYWIEILNPNKMATL 175

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 70.7 bits (172), Expect = 5e-17
 Identities = 14/125 (11%), Positives = 40/125 (32%), Gaps = 10/125 (8%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDG---AWLFGHGIGIHLLQSEN 67
           ++ ++H++ + R++       + V     +    +  F      +     I + ++Q E 
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 68  PDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDG 127
                   +                   + + ++G+          G     ++F+D D 
Sbjct: 62  LAERSYNHI------AFKIDDADFDRYAERVGKLGLDMRPPRPRVEGE-GRSIYFYDDDN 114

Query: 128 FMIEI 132
            M E+
Sbjct: 115 HMFEL 119

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 70.0 bits (170), Expect = 1e-16
 Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 10/139 (7%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF----GHGIGIHLLQSE 66
           +K  +H+S+V +N +E+  FY+NVLG   ++   + +    +        G     L   
Sbjct: 4   IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFF 63

Query: 67  NPDSLPKKSVINPKDNHLSFQCESVGNVEKFL---KEMGIKYVRALVEEGGILVEQLFFH 123
               + +          +     S  ++  +    ++  +K+              L F 
Sbjct: 64  EIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANR---PALQFE 120

Query: 124 DPDGFMIEICDCDNLPVVP 142
           D +G  + +   +   V  
Sbjct: 121 DAEGLRLVLLVSNGEKVEH 139

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 68.0 bits (165), Expect = 8e-16
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 6/126 (4%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKS 75
            ++     + E I FY+  L    I      N     +FG                   +
Sbjct: 12  RIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLP-HADYHLEFTQYEGGSTA 70

Query: 76  VINPKDNHLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI 132
            +   D+ L F   +   +  +   LK MG + V +           +   DPDG+ I  
Sbjct: 71  PVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSN--GGVTIEDPDGWRIVF 128

Query: 133 CDCDNL 138
            +   +
Sbjct: 129 MNSKGI 134

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 66.2 bits (160), Expect = 3e-15
 Identities = 24/122 (19%), Positives = 45/122 (36%), Gaps = 2/122 (1%)

Query: 15  NHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDG--AWLFGHGIGIHLLQSENPDSLP 72
            H  L   ++  SIDFY  VLG   +R   +  +    A++         +     +   
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 73  KKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI 132
            K  +     H++   ++     + +++ G    R      G      F  DPDG+ IE+
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIEL 123

Query: 133 CD 134
            +
Sbjct: 124 IE 125

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 65.3 bits (158), Expect = 9e-15
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 12/122 (9%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           L  +NH++L   ++  SI FY+++LGF    R       GA+L    + + L +      
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRLEARW----DQGAYLELGSLWLCLSREPQYGG 57

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMI 130
                  +                   L+  G++  +    EG    +  +F DPDG  +
Sbjct: 58  PA----ADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEG----DSFYFLDPDGHRL 109

Query: 131 EI 132
           E 
Sbjct: 110 EA 111

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 62.7 bits (151), Expect = 9e-14
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 9/122 (7%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           L+S+NH++L   ++ +S+ F+  +LG     R     ++       G     L  +    
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHAR-----WNTGAYLTCGDLWVCLSYDEARQ 56

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMI 130
                  +      +   E    + + L++ G+   +    EG       +F DPDG  +
Sbjct: 57  YVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEG----ASFYFLDPDGHKL 112

Query: 131 EI 132
           E+
Sbjct: 113 EL 114

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 62.3 bits (150), Expect = 2e-13
 Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 10/126 (7%)

Query: 15  NHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK 74
           +H  +    +  + D +  VLGF    +    N      F              D     
Sbjct: 7   DHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKA------HDVAFIH 60

Query: 75  SVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIE 131
                + +H+SF  E+  ++ +    +              G    + ++F DP G   E
Sbjct: 61  HPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNE 120

Query: 132 I-CDCD 136
           + C  D
Sbjct: 121 VFCGGD 126

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 60.8 bits (146), Expect = 5e-13
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 3/123 (2%)

Query: 12  KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSL 71
           + + H  +   ++  SI FY   LG   +R+          L   G G  +  +    + 
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKY-TLVFLGYGPEMSSTVLELTY 60

Query: 72  PKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIE 131
                    D         V +V++ + +M    V    E+        F  DPDG+ IE
Sbjct: 61  NYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESG--FMAFVVDPDGYYIE 118

Query: 132 ICD 134
           + +
Sbjct: 119 LLN 121

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 60.4 bits (145), Expect = 8e-13
 Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 7/119 (5%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPK 73
             HV L   ++S++++ Y  +LG + + R                   +L+  +      
Sbjct: 8   PGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREADEPG--- 64

Query: 74  KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI 132
                          +++  +E+ L   G    +    E      ++ F  P G   E+
Sbjct: 65  ----MDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFEL 119

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 59.3 bits (142), Expect = 2e-12
 Identities = 19/140 (13%), Positives = 45/140 (32%), Gaps = 18/140 (12%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAW--------------LFGH 56
           L  +++VS+V  ++  +I F++ +   +  R      + G                    
Sbjct: 7   LLRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG 66

Query: 57  GIGIHLLQSENPDSLPKKSVINPKDN---HLSFQCESVGNVEKFLKEMGIKYVRALVEEG 113
              I L +   P ++               + F  E +  +   L + G + V  +V+  
Sbjct: 67  HSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE 126

Query: 114 GILVEQLFFHDPDGFMIEIC 133
                  +    +G +I + 
Sbjct: 127 NS-YRLCYIRGVEGILIGLA 145

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 58.5 bits (140), Expect = 2e-12
 Identities = 16/114 (14%), Positives = 38/114 (33%), Gaps = 6/114 (5%)

Query: 19  LVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVIN 78
           L  R+++E+++F+ + LGF  +        D A +    + + +   ++           
Sbjct: 10  LTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRDDVTLFISAVQDQVVPDNTQAWV 65

Query: 79  PKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI 132
                     E    V    ++     +  +VE+      +    DP G  +  
Sbjct: 66  WVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHF 117

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 58.7 bits (141), Expect = 5e-12
 Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 13/137 (9%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           L  ++H + V  ++     + +  LGF         +      + H        +     
Sbjct: 3   LVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGG- 60

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEE-----GGILVEQLFFHDP 125
                   P+ +H++F      N+ +   +MG   +   +E      G      L+  DP
Sbjct: 61  ------NGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDP 114

Query: 126 DGFMIEICDCDNLPVVP 142
           DG  IEI   D     P
Sbjct: 115 DGHRIEIYTQDYYTGDP 131

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 57.7 bits (138), Expect = 8e-12
 Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 8/126 (6%)

Query: 8   PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSEN 67
              +    ++ +V  ++++S +FY +VLG        +  +  +        + L Q   
Sbjct: 11  APDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPI 70

Query: 68  PDSLPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDG 127
                          +       V   E + KE+G +  R        + + +   DP G
Sbjct: 71  AAV--------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLG 122

Query: 128 FMIEIC 133
           F  E  
Sbjct: 123 FPYEFF 128

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 57.1 bits (137), Expect = 2e-11
 Identities = 18/126 (14%), Positives = 44/126 (34%), Gaps = 10/126 (7%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           ++ +  V L  R + +       + G+  + R        +        I +   + P  
Sbjct: 10  IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQSIKGEAFGEIVVKYLDGPTE 69

Query: 71  LPKKSVINPKDNHLSFQC---ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDG 127
            P         +HL+ +      +   E+ +K+ G      +++      + L+F + +G
Sbjct: 70  KP----GRGSIHHLAIRVKNDAELAYWEEQVKQRGFH-SSGIIDRFYF--KSLYFRESNG 122

Query: 128 FMIEIC 133
            + EI 
Sbjct: 123 ILFEIA 128

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 56.5 bits (135), Expect = 2e-11
 Identities = 25/137 (18%), Positives = 52/137 (37%), Gaps = 14/137 (10%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS--------FNFDGAWLFGHGIGIHL 62
              ++HV+  C +  E+  +YQ   G+  + R  +             A L  H   + +
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 64

Query: 63  LQSENPDS----LPKKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVE 118
           +   N +S       K       +H++++ + +  V   L+E G++ +    + G     
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 119 QLFFH--DPDGFMIEIC 133
             F H     G +IE+ 
Sbjct: 125 INFMHPKSGKGVLIELT 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 54.8 bits (131), Expect = 1e-10
 Identities = 18/143 (12%), Positives = 35/143 (24%), Gaps = 12/143 (8%)

Query: 7   NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAW----LFGHGIGIHL 62
           +P  +K ++ V     N  ++  +Y    G   +   G  N         L        L
Sbjct: 1   DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVL 60

Query: 63  LQSENPDSLPKKSVINPKDN------HLSFQCESVGNVEKFLKEMGIKYVRALVE--EGG 114
                P +     + +           L+ +         +  E G + V    E  +  
Sbjct: 61  TSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEH 120

Query: 115 ILVEQLFFHDPDGFMIEICDCDN 137
             V              + D   
Sbjct: 121 GTVVLAAIATYGKTRHTLVDRTG 143

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 53.0 bits (126), Expect = 4e-10
 Identities = 15/126 (11%), Positives = 33/126 (26%), Gaps = 18/126 (14%)

Query: 12  KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSL 71
           +S+ ++     +++    F    LG +          +G           +   +     
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDLFRIDSRAWRIAVQQGE--- 55

Query: 72  PKKSVINPKDNHLSFQCESVGNVEKF---LKEMGIKYVRALVEEGGILVEQ--LFFHDPD 126
                         ++      + +    LK+ GI                  + F DP 
Sbjct: 56  ------VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPF 109

Query: 127 GFMIEI 132
           G  +EI
Sbjct: 110 GLPLEI 115

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 51.3 bits (121), Expect = 1e-09
 Identities = 15/119 (12%), Positives = 32/119 (26%), Gaps = 11/119 (9%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPK 73
           + H++L   ++  + +F +   G       G+         G  + +   +         
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEVQYPKTFH 63

Query: 74  KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI 132
                  +  +           + LKE G                  +   P GF IE+
Sbjct: 64  VGFPQESEEQVDKIN-------QRLKEDGFLVEPPKHAHA----YTFYVEAPGGFTIEV 111

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 51.5 bits (122), Expect = 1e-09
 Identities = 15/141 (10%), Positives = 41/141 (29%), Gaps = 22/141 (15%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDS 70
           ++ + ++    +++     F    +G +          D A          +        
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSA----GDAALYRADQRAWRIAVQPGE-- 55

Query: 71  LPKKSVINPKDNHLSFQCESVGNVEKFLKEM---GIKYVRALVEEGGI--LVEQLFFHDP 125
                       +   + +    +E+   ++   G+ + R          ++  L   DP
Sbjct: 56  -------LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDP 108

Query: 126 DGFMIEI----CDCDNLPVVP 142
            G  +EI     +  + P +P
Sbjct: 109 FGLPLEIYYGPAEIFHEPFLP 129

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 50.9 bits (120), Expect = 2e-09
 Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 6/115 (5%)

Query: 19  LVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVIN 78
           L   ++  ++ F+ + LGF        F      +    I +H+ ++E+       S   
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDFA----GVRRGDIRLHISRTEHQIVADNTSAWI 66

Query: 79  PKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC 133
              +  +   E    V     +     +  + E       +    DP G  +   
Sbjct: 67  EVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAG--REFAVRDPAGNCVHFT 119

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 50.2 bits (119), Expect = 3e-09
 Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 10/120 (8%)

Query: 13  SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLP 72
           ++N + ++  N+ +     +++L          F    A        + L Q+       
Sbjct: 2   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGF----AQFTIGSHCLMLSQNHLVPLEN 57

Query: 73  KKSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI 132
            +S        +  + E V    K L E+GIK +           E L    P G +++ 
Sbjct: 58  FQS-----GIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDF 111

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 49.6 bits (117), Expect = 4e-09
 Identities = 18/117 (15%), Positives = 35/117 (29%), Gaps = 11/117 (9%)

Query: 16  HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKS 75
             ++     + +  FY ++LG          +               +            
Sbjct: 5   VANIATPEPARAQAFYGDILGM----PVAMDHGWIVTHASPLEAHAQVSFAREGGSG--- 57

Query: 76  VINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEI 132
                   LS + ++   V   + + G+      V E    V++LF  DP G +I I
Sbjct: 58  ---TDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINI 110

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 47.0 bits (110), Expect = 5e-08
 Identities = 14/122 (11%), Positives = 48/122 (39%), Gaps = 2/122 (1%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPK 73
           ++  ++V  ++++S++FY+ +   +P     + + +     G  +    +++        
Sbjct: 3   ISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEW 62

Query: 74  KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVE--EGGILVEQLFFHDPDGFMIE 131
           ++        ++F+     +V+K   E+        ++              DPDG +++
Sbjct: 63  QAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVD 122

Query: 132 IC 133
           + 
Sbjct: 123 LF 124

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 45.4 bits (107), Expect = 3e-07
 Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 15/144 (10%)

Query: 7   NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSE 66
           NP+ L     +             ++  +GF  +    S N     L+  G  I+L+ + 
Sbjct: 3   NPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKNV---HLYRQG-EINLILNN 57

Query: 67  NPDSLPKKSVINPKDN--HLSFQCESVGNVEKFLKEMGIKYVRALVEEG--------GIL 116
            P+S+          +   ++F+ +          E+G + +               GI 
Sbjct: 58  EPNSIASYFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIG 117

Query: 117 VEQLFFHDPDGFMIEICDCDNLPV 140
              L+  D  G    I D D + +
Sbjct: 118 GAPLYLIDRFGEGSSIYDIDFVYL 141

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 45.1 bits (106), Expect = 4e-07
 Identities = 20/136 (14%), Positives = 32/136 (23%), Gaps = 15/136 (11%)

Query: 14  VNHVSLVCRNISESIDFYQNVLGFVPIRRP----GSFNFDGAWLFGHGIGIHLLQSENPD 69
           + H      + ++++ FY  VLGFV         G      A         H +      
Sbjct: 11  IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP 70

Query: 70  SLPKKSVINPKDNHLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPD 126
                     + +H   Q  +   VG     L   G      L           +   P 
Sbjct: 71  I-------PKRIHHFMLQANTIDDVGYAFDRLDAAGRI-TSLLGRHTNDQTLSFYADTPS 122

Query: 127 GFMIEICDCDNLPVVP 142
             +          V  
Sbjct: 123 PMIEVEFGWGPRTVDS 138

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 44.0 bits (103), Expect = 1e-06
 Identities = 11/141 (7%), Positives = 28/141 (19%), Gaps = 25/141 (17%)

Query: 2   KESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRR------------------P 43
           K    +   +K  +H+   C + +     +   LG     +                   
Sbjct: 1   KNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGD 60

Query: 44  GSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDN-------HLSFQCESVGNVEK 96
             F F   +      G     +                +        ++ + E   +   
Sbjct: 61  LRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFS 120

Query: 97  FLKEMGIKYVRALVEEGGILV 117
                G       +     + 
Sbjct: 121 ISVANGAIPSSPPIVLNEAVT 141

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 2e-06
 Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 9/137 (6%)

Query: 10  HLKSVNHVSLVCRNISESIDFYQNVLGFVPI----RRPGSFNFDGAWLFGHGIGIHLLQS 65
                + V+    N  ++  FY N +GF P+       GS       +    I   L  +
Sbjct: 8   RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSA 67

Query: 66  ENPDSLPKKSVINPKDNHLSFQCESVGNVEK---FLKEMGIKYVRA--LVEEGGILVEQL 120
            NP +      +    + +      V + E      +E G K VR   + E+    V+  
Sbjct: 68  LNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFA 127

Query: 121 FFHDPDGFMIEICDCDN 137
                      + +  N
Sbjct: 128 VLQTYGDTTHTLVEKIN 144

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 42.9 bits (100), Expect = 3e-06
 Identities = 12/130 (9%), Positives = 31/130 (23%), Gaps = 19/130 (14%)

Query: 4   SAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF--------- 54
              +  H  + +HV L C + + +   +   LG     R      + A            
Sbjct: 4   PRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLS 63

Query: 55  --------GHGIGIHLLQSENPDSLPKKSVINPKDN--HLSFQCESVGNVEKFLKEMGIK 104
                                  +  ++   +       ++ +     +  +     G +
Sbjct: 64  FLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGAR 123

Query: 105 YVRALVEEGG 114
                V+ G 
Sbjct: 124 PAFGPVDLGR 133

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 39.7 bits (92), Expect = 5e-05
 Identities = 7/109 (6%), Positives = 29/109 (26%), Gaps = 15/109 (13%)

Query: 11  LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDG------AWLFGHGIG----- 59
           L   +H+      ++ +  ++    GF       + +         + +  +        
Sbjct: 7   LSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLP 66

Query: 60  -IHLLQSENPDSLPKKSVINPKD---NHLSFQCESVGNVEKFLKEMGIK 104
               +      S  +  + +       H++   + V    + ++     
Sbjct: 67  LNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAM 115

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 37.6 bits (86), Expect = 1e-04
 Identities = 17/121 (14%), Positives = 32/121 (26%), Gaps = 18/121 (14%)

Query: 19  LVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVIN 78
           L  R+   +  FY+  LGF  + R   +              H                 
Sbjct: 8   LPSRDFDSTAAFYER-LGFGIVFRDAGWMILQRGDLMLEFFAH-----------PGLDPL 55

Query: 79  PKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQ------LFFHDPDGFMIEI 132
                   + + +    +  K +GI+   +          Q          DPDG ++ +
Sbjct: 56  ASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRL 115

Query: 133 C 133
            
Sbjct: 116 I 116

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	168
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.9
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.89
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.89
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.88
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.87
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.87
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.87
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.87
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.86
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.86
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.86
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.85
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.85
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.84
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.84
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.84
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.83
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.83
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.83
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.82
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.81
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.79
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.79
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.78
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.77
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.76
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.75
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.75
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.67
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.64
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.6
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.29
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.28
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.26
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.24
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.18
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.1
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.93
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.7
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.09
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	94.86
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	94.37
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	94.26
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	94.2
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	93.85
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	93.24
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	92.36
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	91.2
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	90.43
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	90.12
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	89.77
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	86.7
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	85.85
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	85.5
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	84.27
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	83.25
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	82.97
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	82.96
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	81.04
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	80.96
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	80.78

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.90  E-value=8.4e-23  Score=132.25  Aligned_cols=114  Identities=16%  Similarity=0.134  Sum_probs=90.7

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCH
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESV   91 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl   91 (168)
                      ++|+|+.|.|+|+++|++||+++||+++....+    .-+++..++..+.+........     ...+...+++|.|+|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~~~~~~g~~~l~l~~~~~~~~-----~~~~~~~~~~f~v~D~   71 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFAQFTIGSHCLMLSQNHLVPL-----ENFQSGIIIHIEVEDV   71 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEEEEEETTEEEEEESSCSSSC-----CCCCSCEEEEEECSCH
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----CeEEEEEcCceeeeeecccCCC-----CCCCcceEEEEEECCH
Confidence            378999999999999999999999999876543    3456677777777766433211     1123457899999999


Q ss_pred             HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           92 GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        92 ~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      ++++++|+++|+++..++...+ ++.+.++|+|||||.|||.+.
T Consensus        72 d~~~~~l~~~G~~i~~~~~~~~-~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          72 DQNYKRLNELGIKVLHGPTVTD-WGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             HHHHHHHHHHTCCEEEEEEECT-TSCEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHHhhccccccceEEee-CCeEEEEEECCCCCEEEEEEe
Confidence            9999999999999998876654 344679999999999999874

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.89  E-value=2.9e-22  Score=134.30  Aligned_cols=130  Identities=15%  Similarity=0.201  Sum_probs=88.8

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcce---eEEecC----CcEEEEeecCCCCCCCCCCCCCCC
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDG---AWLFGH----GIGIHLLQSENPDSLPKKSVINPK   80 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~---~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~   80 (168)
                      |..+++|+||+|.|+|++++++||+++|||++..+....+...   .++...    ...+.+.......  + .....++
T Consensus         1 m~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~-~~~~~~~   77 (144)
T d1zswa1           1 MYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG--R-TYRGTNA   77 (144)
T ss_dssp             SSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCC--B-CBCCBSE
T ss_pred             CCcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeeccccccc--C-CccCCCc
Confidence            5779999999999999999999999999999886543222111   122221    1233333332221  1 1122345


Q ss_pred             ceEEEEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCCCCCCCc
Q 030972           81 DNHLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNLPVVPL  143 (168)
Q Consensus        81 ~~hl~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~~~~~p~  143 (168)
                      ..|++|.|+|   ++++.++|+++|+.+... ....+  .+++||+|||||.|||++....+..|+
T Consensus        78 ~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~-~~~~~--~~~~yf~DPdG~~iEl~~~~~~~~~~w  140 (144)
T d1zswa1          78 ITRIGLLVPSEDSLHYWKERFEKFDVKHSEM-TTYAN--RPALQFEDAEGLRLVLLVSNGEKVEHW  140 (144)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHHTTCEECCS-EEETT--EEEEEEECTTCCEEEEEECTTCCCTTC
T ss_pred             eeEEEEecCCchhHHHHhhhhhccceeeeCc-cccCC--eEEEEEECCCCCEEEEEEeCCCCCCCC
Confidence            7999999987   777899999999987543 33333  466999999999999998765444443

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.89  E-value=8.2e-23  Score=140.98  Aligned_cols=125  Identities=15%  Similarity=0.298  Sum_probs=90.7

Q ss_pred             CccCCCCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCc---EEEEeecCCCCCCCCCCCCC
Q 030972            2 KESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGI---GIHLLQSENPDSLPKKSVIN   78 (168)
Q Consensus         2 ~~~~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~   78 (168)
                      ++.+|+...+++|+||+|.|+|++++.+||+++|||++..+.+.   ...|....+.   .+.+.....+...    ...
T Consensus         1 ~~~vp~~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~   73 (170)
T d1zswa2           1 KSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ---EAIFQSIKGEAFGEIVVKYLDGPTEK----PGR   73 (170)
T ss_dssp             TCSSCGGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS---EEEEESSTTCSTTCEEEEECCSSBCB----CCB
T ss_pred             CCCCChhHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc---eEEEEeccCccceEEEeccccccccc----cCc
Confidence            46778888999999999999999999999999999999887642   2334333322   2222222222111    223


Q ss_pred             CCceEEEEEeCC---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           79 PKDNHLSFQCES---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        79 ~~~~hl~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ++++|++|.|+|   +++++++++++|+++.. +....  ..+++||+|||||.|||++..
T Consensus        74 ~~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~-~~~~~--~~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          74 GSIHHLAIRVKNDAELAYWEEQVKQRGFHSSG-IIDRF--YFKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             TCEEEEEEEESSHHHHHHHHHHHHHTTCCCCC-CEECS--SEEEEEEECTTCCEEEEEEEE
T ss_pred             cccceEEEEeCChHHHHHHHHHHHhcCCCccc-cccCC--CEEEEEEECCCCcEEEEEECC
Confidence            467899999975   77889999999999853 33332  346799999999999999863

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.88  E-value=7.3e-22  Score=132.65  Aligned_cols=125  Identities=17%  Similarity=0.256  Sum_probs=90.9

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC-------------CCcceeEEecC--CcEEEEeecCCCCCCCC
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS-------------FNFDGAWLFGH--GIGIHLLQSENPDSLPK   73 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-------------~~~~~~~~~~~--~~~~~l~~~~~~~~~~~   73 (168)
                      -.+++++|++|.|+|++++.+||++ |||+...+...             ......++...  ...+++++.........
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCccc
Confidence            4577999999999999999999999 99998764220             11122333332  34666665544432221


Q ss_pred             ---CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           74 ---KSVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        74 ---~~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                         ......|..|++|.|+|+++++++|+++|+++..++....+ ..+.+|++|||||.|||++.
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence               11234578999999999999999999999999877765543 44679999999999999984

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.87  E-value=1.4e-21  Score=128.59  Aligned_cols=117  Identities=14%  Similarity=0.270  Sum_probs=87.0

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC---CCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS---FNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      |+.+|+||+|.|+|++++++||+++|||++......   ......++..++..+.+......        ...+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL--------AERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCC--------SSCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeecccccc--------cccceeeeee
Confidence            467999999999999999999999999998765432   22345556666666666554332        1236689999


Q ss_pred             EeC--CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           87 QCE--SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        87 ~v~--dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      .++  |+++++++|+++|+++...+....+ ..+.+||+|||||.|||.+.
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCC-CEEEEEEECCCCCEEEEEEC
Confidence            875  8999999999999998766443332 23569999999999999874

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.87  E-value=2.7e-21  Score=128.89  Aligned_cols=115  Identities=23%  Similarity=0.407  Sum_probs=87.5

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEe-
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQC-   88 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v-   88 (168)
                      |+++|+||+|.|+|++++++||+++|||++.....    ...++..++....+.........+   ....+..|++|.+ 
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~h~~~~~~   73 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TGAYLTCGDLWVCLSYDEARQYVP---PQESDYTHYAFTVA   73 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TEEEEEETTEEEEEEECTTCCCCC---GGGSCSCEEEEECC
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec----cccccccccccceeecccccccCC---CcCCccceeeeech
Confidence            47899999999999999999999999999987654    345566666655555544432222   2234668888887 


Q ss_pred             -CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           89 -ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        89 -~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                       +|+++++++|+++|+++...+.  .+  .+.+||+|||||.|||...
T Consensus        74 ~~d~~~~~~~l~~~Gv~~~~~~~--~~--~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          74 EEDFEPLSQRLEQAGVTIWKQNK--SE--GASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECCC--SS--SEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCeEeecCC--CC--ceEEEEECCCCCEEEEEEC
Confidence             4899999999999999876543  22  2569999999999999874

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.87  E-value=3.2e-22  Score=133.66  Aligned_cols=127  Identities=17%  Similarity=0.300  Sum_probs=90.9

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC--CCcceeEE------ecCCcEEEEeecCCCCCCCCC----CCC
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS--FNFDGAWL------FGHGIGIHLLQSENPDSLPKK----SVI   77 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~----~~~   77 (168)
                      ++++|+||+|.|+|+++|++||+++||++.......  .+....+.      ..+...+++++..........    ...
T Consensus         4 m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~   83 (145)
T d1jc4a_           4 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNG   83 (145)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTT
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCC
Confidence            478999999999999999999999999998764321  11111221      234567888877665432211    133


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEE--ECCCCCEEEEEeeC
Q 030972           78 NPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFF--HDPDGFMIEICDCD  136 (168)
Q Consensus        78 ~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~--~DPdG~~iel~~~~  136 (168)
                      ..|+.|+||.|+|+++++++|+++|+++..++......+.+.+|+  +||+|+.|||+++.
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            568899999999999999999999999875543322122233555  69999999999974

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.87  E-value=4.3e-22  Score=131.69  Aligned_cols=120  Identities=16%  Similarity=0.222  Sum_probs=89.8

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      .|++|+||+|.|+|++++++||+++|||++..+.+    ..+|+..++.  .+.+....           ..+..|++|.
T Consensus         1 ~I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~----~~~~l~~~~~~~~l~l~~~~-----------~~~~~h~~f~   65 (131)
T d1lgta1           1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDLFRIDSRAWRIAVQQGE-----------VDDLAFAGYE   65 (131)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSSBSCSEEEEECT-----------TCEEEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHhhCCceeecCC----cceEEeecCCceEEEEecCC-----------CCCceEEEEE
Confidence            37899999999999999999999999999988654    4667766653  34444322           2378999999


Q ss_pred             eC---CHHHHHHHHHHcCCeEEeeeeeeC--CeeEEEEEEECCCCCEEEEEeeCC-CCCCCcc
Q 030972           88 CE---SVGNVEKFLKEMGIKYVRALVEEG--GILVEQLFFHDPDGFMIEICDCDN-LPVVPLV  144 (168)
Q Consensus        88 v~---dl~~~~~~l~~~g~~~~~~~~~~~--g~~~~~~~~~DPdG~~iel~~~~~-~~~~p~~  144 (168)
                      +.   +++++.++|+++|+++...+....  ....+.+||+|||||.|||+.... ....|..
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~~~~~~~pf~  128 (131)
T d1lgta1          66 VADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFL  128 (131)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCC
T ss_pred             EccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCCCccCCCCCC
Confidence            96   577889999999999987654321  112356999999999999987533 3334444

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.2e-21  Score=128.89  Aligned_cols=122  Identities=21%  Similarity=0.284  Sum_probs=84.7

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCC--cceeEEecCC-c---EEEEeecCCCCCCCCCCCCCCCceEEE
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFN--FDGAWLFGHG-I---GIHLLQSENPDSLPKKSVINPKDNHLS   85 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~--~~~~~~~~~~-~---~~~l~~~~~~~~~~~~~~~~~~~~hl~   85 (168)
                      ++|.|++|.|+|+++|++||+++|||++........  ....+..... .   ..........    .......+..|++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~   76 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV----DKYELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTC----CCCCCCSSEEEEE
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeecccccccccccc----ccccccccceeec
Confidence            478999999999999999999999999876533111  1112222111 1   1111111111    1112345678999


Q ss_pred             EEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           86 FQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        86 ~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +.+++++.+.++++++|..+...+...+..+.+.+||+|||||.|||++...
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~  128 (135)
T d1f9za_          77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             cchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCC
Confidence            9999999999999999999988877655445567899999999999999754

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.86  E-value=1.9e-21  Score=124.95  Aligned_cols=108  Identities=22%  Similarity=0.360  Sum_probs=80.1

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecC-CcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGH-GIGIHLLQSENPDSLPKKSVINPKDNHLSFQCES   90 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d   90 (168)
                      ++|+||.|.|+|++++++||+++|||+...+.+.   ...++..+ +..+.+......        ..++..|++|.|+|
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~~~~~~h~~f~v~~   70 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN---AFAVMRDNDGFILTLMKGKEV--------QYPKTFHVGFPQES   70 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT---TEEEEECTTCCEEEEEECSSC--------CCCTTCCEEEECSS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC---cceeeeecceeeeeeeeeecc--------cccccceeeeeecc
Confidence            4789999999999999999999999999876542   22333333 345555544332        13467899999986


Q ss_pred             ---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           91 ---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        91 ---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                         ++++.++++++|+++...+.  .+  .+.+||+|||||.|||+.
T Consensus        71 ~~~v~~~~~~l~~~G~~~~~~~~--~~--~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          71 EEQVDKINQRLKEDGFLVEPPKH--AH--AYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCEE--C---CEEEEEEETTTEEEEEEC
T ss_pred             ccchhhhhhhHHHcCCccccCCC--Cc--eEEEEEECCCCCEEEEEC
Confidence               66788999999999765443  21  256999999999999963

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.86  E-value=1.1e-21  Score=129.97  Aligned_cols=120  Identities=14%  Similarity=0.218  Sum_probs=89.9

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcE--EEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIG--IHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      .|++|+||+|.|+|++++.+||+++|||++..+..    ..+|+..++..  +.+....           ..+..|++|.
T Consensus         1 ~i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~l~~~~~~~~l~~~~~~-----------~~~~~h~~f~   65 (132)
T d1kw3b1           1 SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DAALYRADQRAWRIAVQPGE-----------LDDLAYAGLE   65 (132)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSSBSCSEEEEECT-----------TCEEEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHHhCCceecccc----ceeeeeeeecceeeeeeccC-----------CCCceEEEEE
Confidence            37899999999999999999999999999887655    56777766543  3333221           2378999999


Q ss_pred             eC---CHHHHHHHHHHcCCeEEeeeeeeCC--eeEEEEEEECCCCCEEEEEeeCCC-CCCCcc
Q 030972           88 CE---SVGNVEKFLKEMGIKYVRALVEEGG--ILVEQLFFHDPDGFMIEICDCDNL-PVVPLV  144 (168)
Q Consensus        88 v~---dl~~~~~~l~~~g~~~~~~~~~~~g--~~~~~~~~~DPdG~~iel~~~~~~-~~~p~~  144 (168)
                      |.   +++++.++|+++|+++...+.....  .....+||.||+||.|||+..... ...|..
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~~~~~~~p~~  128 (132)
T d1kw3b1          66 VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEPFL  128 (132)
T ss_dssp             CSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCC
T ss_pred             eccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECCCccCCCCCC
Confidence            96   5788999999999999876543211  122568999999999999976442 233444

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.85  E-value=4.9e-21  Score=130.90  Aligned_cols=121  Identities=14%  Similarity=0.155  Sum_probs=85.0

Q ss_pred             CccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC--CcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972            9 LHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF--NFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus         9 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      |...+++||+|.|+|++++++||+++|||++..+....  .....+...+...........        ...++..|++|
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH--------PEKGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEEC--------SSSSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccccccccccc--------CCCCccceeEE
Confidence            45678999999999999999999999999987643211  122233333322111111111        11246899999


Q ss_pred             EeCCHH---HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           87 QCESVG---NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        87 ~v~dl~---~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .+.+++   ++.++|+++|+++...+........+++||+|||||.|||.+...
T Consensus        73 ~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          73 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             EEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            998655   678999999999987776554334467999999999999998754

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.85  E-value=1.8e-20  Score=123.95  Aligned_cols=112  Identities=23%  Similarity=0.365  Sum_probs=84.9

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEe-
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQC-   88 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v-   88 (168)
                      |+.+|+||+|.|+|++++++||+++||+++..+.+    ...++..++..++..........      ..+..|++|.+ 
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~------~~~~~h~~~~~~   70 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD----QGAYLELGSLWLCLSREPQYGGP------AADYTHYAFGIA   70 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEEETTEEEEEEECTTCCCC------CSSSCEEEEEEC
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc----ceeeeecCCeEEEEeeecccccc------ccccccchhccc
Confidence            47899999999999999999999999999887655    45566667766666544433211      23456666665 


Q ss_pred             -CCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           89 -ESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        89 -~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                       +|+++++++|+++|+.+...+.  ++  .+.+||+|||||.|||...
T Consensus        71 ~~dl~~~~~~l~~~G~~~~~~~~--~~--~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          71 AADFARFAAQLRAHGVREWKQNR--SE--GDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECCC--SS--SCEEEEECTTCCEEEEESC
T ss_pred             cchHHHHHHHHHHCCCcCccCCC--cc--eeEEEEECCCCCEEEEEEC
Confidence             5999999999999999865432  22  2459999999999999763

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.84  E-value=8.8e-21  Score=127.47  Aligned_cols=114  Identities=18%  Similarity=0.246  Sum_probs=85.1

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCc----EEEEeecCCCCCCCCCCCCCCCceE
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGI----GIHLLQSENPDSLPKKSVINPKDNH   83 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~h   83 (168)
                      ...+.+|+||.|.|+|++++++||+++|||+......    ...++...+.    ...+....           ..+..|
T Consensus        11 ~~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~h   75 (146)
T d1f1ua1          11 APDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVLRQGP-----------IAAVAA   75 (146)
T ss_dssp             CCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEEEEECTTCCSSCSEEEEECS-----------SCEEEE
T ss_pred             CCCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC----CceeeecccccccceeeccccC-----------CCCCce
Confidence            3558999999999999999999999999999988755    2344432221    12222211           247799


Q ss_pred             EEEEeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           84 LSFQCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        84 l~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ++|.+.   |++++.++|+++|+++...+........+++||+|||||.|||.+..
T Consensus        76 ~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          76 FAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             eeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEec
Confidence            999996   68889999999999998765443311235699999999999999853

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.8e-20  Score=129.44  Aligned_cols=130  Identities=22%  Similarity=0.293  Sum_probs=87.7

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecC-------------------CcEEEEeec
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGH-------------------GIGIHLLQS   65 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~-------------------~~~~~l~~~   65 (168)
                      +....-+++|++|.|+|++++++||+++|||+......  ..+....+...+                   .....+...
T Consensus        17 ~~~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (176)
T d1qipa_          17 PSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN   96 (176)
T ss_dssp             GGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             CCccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEe
Confidence            33556689999999999999999999999999775322  122222333211                   112222221


Q ss_pred             CC--CCCCCCC---CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCCC
Q 030972           66 EN--PDSLPKK---SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNL  138 (168)
Q Consensus        66 ~~--~~~~~~~---~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~~  138 (168)
                      ..  .......   .....++.|+++.++|+++++++|+++|+++...+....+.  ..+||+|||||.|||++....
T Consensus        97 ~~~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~--~~~f~~DPdG~~IElvq~~~~  172 (176)
T d1qipa_          97 WGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMK--GLAFIQDPDGYWIEILNPNKM  172 (176)
T ss_dssp             TTGGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSST--TCEEEECTTCCEEEEECTTTG
T ss_pred             eccccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCce--EEEEEECCCCCEEEEEeCCCC
Confidence            11  1111111   12345789999999999999999999999998876543332  338899999999999997653

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.84  E-value=1.7e-20  Score=119.89  Aligned_cols=110  Identities=18%  Similarity=0.184  Sum_probs=81.0

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCH
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESV   91 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl   91 (168)
                      +++ +..|.|+|++++++||+++|||+.....+.    ...+..++....+.......      ....+..|++|.++|+
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~dv   70 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHGW----IVTHASPLEAHAQVSFAREG------GSGTDVPDLSIEVDNF   70 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECSS----EEEEEEEEEEEEEEEEESSS------BTTBCCCSEEEEESCH
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeecccc----eeEeccccccceeeeccccc------CCCCceeEEEEEecCH
Confidence            566 688999999999999999999998876542    22333333322222222211      1234567999999999


Q ss_pred             HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEE
Q 030972           92 GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEIC  133 (168)
Q Consensus        92 ~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~  133 (168)
                      ++++++++++|+++..++...+ ++.+.+|++|||||.|||+
T Consensus        71 d~~~~~l~~~g~~~~~~p~~~~-~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          71 DEVHARILKAGLPIEYGPVTEA-WGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHHHHHHTTCCCSEEEEECT-TSCEEEEEECTTSCEEEEE
T ss_pred             HHHHHHHHhhccccccCCeEcC-CCcEEEEEECCCCCEEEeC
Confidence            9999999999999988776654 2346799999999999986

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.83  E-value=1.2e-20  Score=125.37  Aligned_cols=119  Identities=19%  Similarity=0.232  Sum_probs=80.7

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCC-CCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCC---H
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPG-SFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCES---V   91 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d---l   91 (168)
                      .|++.|+|++++++||+++|||++..+.. ...+..+++...+..+++...........  ....+..|++|.|++   +
T Consensus        12 RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~hlaf~v~~~~dv   89 (137)
T d1twua_          12 RIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTA--PVPHPDSLLVFYVPNAVEL   89 (137)
T ss_dssp             EEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCCCC--CCCCTTCEEEEECCCHHHH
T ss_pred             EEecccCCHHHHHHHHHhccCCceeeeeccccceeEEEecCCCCceeeecccccccccc--cccccCceEEEEeCCHHHH
Confidence            34445689999999999999999876533 22334555555554444333222211111  223467899999875   7


Q ss_pred             HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCCC
Q 030972           92 GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDNL  138 (168)
Q Consensus        92 ~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~~  138 (168)
                      ++++++|+++|+++..++...++.  +.+||+|||||.|||..+...
T Consensus        90 ~~~~~~l~~~G~~~~~~~~~~~~~--~~~~f~DPDG~~Iel~~~~~~  134 (137)
T d1twua_          90 AAITSKLKHMGYQEVESENPYWSN--GGVTIEDPDGWRIVFMNSKGI  134 (137)
T ss_dssp             HHHHHHHHHTTCCEECCSSHHHHS--SEEEEECTTCCEEEEESSCCC
T ss_pred             HHHHHHHHHCCCeEeCCCCCCCCc--eEEEEECCCCCEEEEEcCCCC
Confidence            788999999999998655433322  459999999999999987653

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.83  E-value=1.8e-20  Score=125.45  Aligned_cols=113  Identities=18%  Similarity=0.298  Sum_probs=79.9

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCc----EEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGI----GIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      +++|+||.|.|+|++++.+||+++|||.+..+....   ..+......    ...+....           ..+..|+++
T Consensus         5 i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~   70 (145)
T d1mpya1           5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG---RVYLKAWTEVDKFSLVLREAD-----------EPGMDFMGF   70 (145)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS---CEEEECTTCCBSCSEEEEECS-----------SCEEEEEEE
T ss_pred             CcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC---ccceecccccceeeccccccC-----------cccceeeee
Confidence            789999999999999999999999999988765421   122222211    12222211           125567777


Q ss_pred             EeC---CHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           87 QCE---SVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        87 ~v~---dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .+.   |+++++++|+++|+++...+........+.+||+|||||.|||++...
T Consensus        71 ~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             eehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            664   788999999999999876654332122367999999999999997543

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.83  E-value=7.3e-20  Score=120.08  Aligned_cols=119  Identities=14%  Similarity=0.150  Sum_probs=82.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEe-cCCcEEEEeecCCCC--CCCCCCCCCCCceEEEEEeC
Q 030972           13 SVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF-GHGIGIHLLQSENPD--SLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        13 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~--~~~~~~~~~~~~~hl~~~v~   89 (168)
                      +|+|++|.|+|++++++||++ |||.........  ....+. .++..+.+.......  ..........+..|++|.|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~   78 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA--PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFEFP   78 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC--SEEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEECS
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCccccccccc--cceeeeccceeeeeecccccccccCCCCCCCccccceeEeeeec
Confidence            789999999999999999987 898876654322  222232 233344443221110  00111122345689999998


Q ss_pred             C---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           90 S---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        90 d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +   +++++++|+++|+++..++...+ ++.+.+||+|||||.|||.++
T Consensus        79 ~~~~l~~~~~~l~~~G~~~~~~p~~~~-~G~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          79 DTASVDKKYAELVDAGYEGHLKPWNAV-WGQRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             SHHHHHHHHHHHHHTTCEEEEEEEECT-TSEEEEEEECTTSCEEEEEEE
T ss_pred             cchhhHHHHHHHHhccCccccCCeEcC-CCcEEEEEECCCCCEEEEEec
Confidence            6   67789999999999988876654 345779999999999999874

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.82  E-value=1.2e-19  Score=123.94  Aligned_cols=130  Identities=14%  Similarity=0.101  Sum_probs=98.8

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC----CCCcceeEEecCCcEEEEeecCCCCCCCCC------CCC
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG----SFNFDGAWLFGHGIGIHLLQSENPDSLPKK------SVI   77 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~   77 (168)
                      ++++++++||+|.|.|+++|++||+++|||+......    ........+..+...+.+.+..........      ...
T Consensus         2 p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           2 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcC
Confidence            5789999999999999999999999999999876432    112223445556667888776654321110      023


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeee--CCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           78 NPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        78 ~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~--~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +.|..|+||.|+|+++++++|+++|+++...|...  .+.....+++++|+|..++|++..+
T Consensus        82 g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            46889999999999999999999999999887653  2334677999999999999998754

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=5.5e-19  Score=118.85  Aligned_cols=130  Identities=18%  Similarity=0.124  Sum_probs=96.0

Q ss_pred             CCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC----CCcceeEEecCCcEEEEeecCCCCCCCCC---CCCCCC
Q 030972            8 PLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS----FNFDGAWLFGHGIGIHLLQSENPDSLPKK---SVINPK   80 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~   80 (168)
                      ...+.+++||+|.|+|+++|++||+++|||+.......    .......+..++..+.+.........+..   .....|
T Consensus         6 ~~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G   85 (149)
T d1sqia1           6 RGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDG   85 (149)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             CCceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCe
Confidence            35678999999999999999999999999998764321    11122334556667777765554322111   123568


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeEEeeeeee--CCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           81 DNHLSFQCESVGNVEKFLKEMGIKYVRALVEE--GGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        81 ~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~--~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ..|+||.|+|+++++++|+++|+++..+|...  .....+.+++..|+|..++|++...
T Consensus        86 ~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~  144 (149)
T d1sqia1          86 VKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN  144 (149)
T ss_dssp             EEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             EEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCC
Confidence            89999999999999999999999998887542  2223466788899899999999765

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.79  E-value=1.1e-18  Score=120.73  Aligned_cols=116  Identities=21%  Similarity=0.280  Sum_probs=79.9

Q ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC--CCCcceeEEecCCc--EEEEeecCCCCCCCCCCCCCCCceEEE
Q 030972           10 HLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG--SFNFDGAWLFGHGI--GIHLLQSENPDSLPKKSVINPKDNHLS   85 (168)
Q Consensus        10 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~   85 (168)
                      .+.+|+||+|.|+|++++++|| ++|||++..+..  ......+|+..+..  .+.+....           ..+.+|++
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~~H~~   69 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN-----------GPRMHHVA   69 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS-----------BSEEEEEE
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceeccccc-----------CCCcccee
Confidence            3678999999999999999999 579999875422  12223444544432  33333222           24789999


Q ss_pred             EEeCCHH---HHHHHHHHcCCe--EEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           86 FQCESVG---NVEKFLKEMGIK--YVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        86 ~~v~dl~---~~~~~l~~~g~~--~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      |.+.+++   ++.++|+++|+.  ....+.........++||+|||||.|||.....
T Consensus        70 f~~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          70 FATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             EEeccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            9998544   567799999985  334444433223467999999999999998654

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.79  E-value=3.5e-18  Score=116.94  Aligned_cols=135  Identities=9%  Similarity=0.059  Sum_probs=97.2

Q ss_pred             CccCCCCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC----CcceeEEecCCcEEEEeecCCCCC-------
Q 030972            2 KESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF----NFDGAWLFGHGIGIHLLQSENPDS-------   70 (168)
Q Consensus         2 ~~~~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~-------   70 (168)
                      ||+...++.+++++||+|.|+|++++++||+++|||+...+....    ......+..+...+.+........       
T Consensus         1 ~~p~~~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   80 (167)
T d1sqda1           1 KNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKP   80 (167)
T ss_dssp             CCCCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGG
T ss_pred             CCCCCCCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccc
Confidence            566778899999999999999999999999999999987653311    111122333444444433222110       


Q ss_pred             -----CCCCC---------CCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           71 -----LPKKS---------VINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        71 -----~~~~~---------~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                           .+...         ....|..||||.|+|+++++++|+++|+++..+|....+ +.+.+++..+++..++|++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~  159 (167)
T d1sqda1          81 TTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYK  159 (167)
T ss_dssp             GCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecC
Confidence                 00000         123588999999999999999999999999988877654 356688999999999999986


Q ss_pred             C
Q 030972          137 N  137 (168)
Q Consensus       137 ~  137 (168)
                      .
T Consensus       160 ~  160 (167)
T d1sqda1         160 A  160 (167)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.78  E-value=5.9e-19  Score=116.11  Aligned_cols=117  Identities=17%  Similarity=0.189  Sum_probs=80.1

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEe--cCC---cEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLF--GHG---IGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~--~~~---~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      ++++||+|.|+|++++++||+++|||++............+..  ...   ...........   ...........++++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   78 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG---VTSYKHDEAYGHIAI   78 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETT---CCCCCCCSSEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccC---cccccCCCccceeee
Confidence            5899999999999999999999999999775432222222221  111   11111111111   111123446678999


Q ss_pred             EeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           87 QCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        87 ~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      .+++++.+++.+...++++...+   .+  .+.+||+|||||.|||++..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~---~g--~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          79 GVEDVKELVADMRKHDVPIDYED---ES--GFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEC---SS--SSEEEEECTTSCEEEEEEHH
T ss_pred             ehhhHHHHHHHHHHcCCceeeCC---CC--cEEEEEECCCCCEEEEEECC
Confidence            99999999999999999876542   22  35599999999999999854

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.77  E-value=8.2e-18  Score=108.88  Aligned_cols=106  Identities=17%  Similarity=0.218  Sum_probs=80.3

Q ss_pred             EEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHH
Q 030972           18 SLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKF   97 (168)
Q Consensus        18 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~~~~~   97 (168)
                      .|.|+|+++|++||++ |||++.....    ...++..++..+.+.......       ......++++.+++++++++.
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~~   74 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRGDLMLEFFAHPGLD-------PLASWFSCCLRLDDLAEFYRQ   74 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEETTEEEEEEECTTCC-------GGGCCCEEEEEESCHHHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC----ceeeeecceeccccccccccc-------cCCCCcEEEEEECCHHHHHHH
Confidence            4999999999999998 9999987654    345555666666666554431       123457899999999999999


Q ss_pred             HHHcCCeEEee-------eeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           98 LKEMGIKYVRA-------LVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        98 l~~~g~~~~~~-------~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      ++++|+++...       +... .++.+.+||+|||||.|||++.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~-~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          75 CKSVGIQETSSGYPRIHAPELQ-GWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHTTCCBCSSSSSEEEEEEEC-TTSSEEEEEECTTSCEEEEEECC
T ss_pred             Hhhhhhhhccccccccccceec-CCCcEEEEEECCCCCEEEEEEcc
Confidence            99998886543       2222 23457799999999999999864

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.76  E-value=2.1e-17  Score=113.68  Aligned_cols=134  Identities=9%  Similarity=0.041  Sum_probs=96.1

Q ss_pred             ccCCCCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC----CcceeEEecCCcEEEEeecCCCCCCCC----C
Q 030972            3 ESAGNPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF----NFDGAWLFGHGIGIHLLQSENPDSLPK----K   74 (168)
Q Consensus         3 ~~~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~----~   74 (168)
                      ++.+....+++++||+|.|+|++++++||+++|||+...+....    ......+..+...+.+...........    .
T Consensus         3 ~~~~d~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (172)
T d1sp8a1           3 NPRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALP   82 (172)
T ss_dssp             CCCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSST
T ss_pred             CCCCccCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccc
Confidence            34456688999999999999999999999999999997643311    111222334444444443333221100    0


Q ss_pred             -----------CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           75 -----------SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        75 -----------~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                                 ...+.|..||||.|+|+++++++|+++|+++..+|....+ +.+.++++.+.+..++|++...
T Consensus        83 ~~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          83 SFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             TCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCT
T ss_pred             cCCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCC
Confidence                       0134688999999999999999999999999988876543 4567889999888999999865

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.75  E-value=5.4e-18  Score=114.95  Aligned_cols=117  Identities=16%  Similarity=0.196  Sum_probs=78.7

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC-----CCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG-----SFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      .+|+|++|.|+|++++.+||+++|||++.....     .......|+..+.....+.....        ....+++|++|
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~--------~~~~gl~Hiaf   80 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAF--------PIPKRIHHFML   80 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC--------SCSSSEEEEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccC--------CCCCceeEEEE
Confidence            589999999999999999999999999865321     11112334444332211111111        11247899999


Q ss_pred             EeCCH---HHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCC-EEEEEeeCC
Q 030972           87 QCESV---GNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGF-MIEICDCDN  137 (168)
Q Consensus        87 ~v~dl---~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~-~iel~~~~~  137 (168)
                      .|+++   .+++++|+++|+.+.. +.........++|+.||+|+ .+|+.....
T Consensus        81 ~v~~~ddv~~~~d~l~~~G~~~~g-~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~~  134 (156)
T d1kw3b2          81 QANTIDDVGYAFDRLDAAGRITSL-LGRHTNDQTLSFYADTPSPMIEVEFGWGPR  134 (156)
T ss_dssp             EBSSHHHHHHHHHHHHHTTCBCBC-SEEESSSCCEEEEEECSSTTCEEEEEECCC
T ss_pred             ECCCHHHHHHHHHHHHhcCCceec-CcccCCCCeEEEEEECCCCCeEEEEecCCc
Confidence            99754   4578999999987644 33332223467999999998 599988654

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.75  E-value=2.6e-17  Score=106.54  Aligned_cols=106  Identities=12%  Similarity=0.105  Sum_probs=80.7

Q ss_pred             EEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHH
Q 030972           18 SLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVEKF   97 (168)
Q Consensus        18 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~~~~~   97 (168)
                      .|.|+|++++++||+++|||++..+.+    ..+++..++..+++.......        .....++.+.+.|++.++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~~~~i~~~~~~   77 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----DFAGVRRGDIRLHISRTEHQI--------VADNTSAWIEVTDPDALHEE   77 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----SEEEEEETTEEEEEEECSCHH--------HHTTCEEEEEESCHHHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----ceeEeeeeeeeeeeecccccc--------ccceeEEEEeechhHHHHHH
Confidence            589999999999999999999988755    345666777788887655431        12457899999999999999


Q ss_pred             HHHcCCeEEeeeee------eCCeeEEEEEEECCCCCEEEEEee
Q 030972           98 LKEMGIKYVRALVE------EGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        98 l~~~g~~~~~~~~~------~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +++++......+..      ....+.+.+||.|||||+|||...
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          78 WARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            99998765433210      011234779999999999999874

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.67  E-value=2.1e-15  Score=96.80  Aligned_cols=105  Identities=15%  Similarity=0.255  Sum_probs=78.2

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeCCHHHHH
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCESVGNVE   95 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~dl~~~~   95 (168)
                      +..|.|+|++++++||+++|||++..+.+    ...++..++..+++.......        ..+..++.+.+++++.+.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~   74 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRDDVTLFISAVQDQV--------VPDNTQAWVWVRGLDELY   74 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEEETTEEEEEEECSCTT--------TGGGCEEEEEEECHHHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC----CeeEEecccceeecccccccc--------CCCCceEEEeeccHHHHH
Confidence            45599999999999999999999988765    345666677777777655431        235678889999999998


Q ss_pred             HHHHHcCCeE--------EeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           96 KFLKEMGIKY--------VRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        96 ~~l~~~g~~~--------~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      +.+.+++...        ...+...+  ..+.+||+|||||.|||++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          75 AEWSEVVSTNFRDASGPAMTEIVEQP--WGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHTTTSBSCTTTCSSCEECCCEEET--TEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHhhhHHhhhcccccccCceecC--CEEEEEEECCCCCEEEEEE
Confidence            8877665443        33333333  2367999999999999986

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.64  E-value=2e-15  Score=99.46  Aligned_cols=117  Identities=10%  Similarity=0.040  Sum_probs=77.5

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccCCCCC---------cceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRPGSFN---------FDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      ++.+.+.|+++|++||+++||++...+....+         ...+-+..++..+.+............ ...+...+|++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~   88 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTA-KSEGSGVTFLL   88 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCC-CTTSCCCEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccccC-CCCCcceEEEE
Confidence            56667789999999999999999876432111         112233445555555443322111111 22234469999


Q ss_pred             EeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           87 QCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        87 ~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      .++|++++++++.++|.++..++...+ ++.+.+++.||+||.|+|.+
T Consensus        89 ~v~d~~~~~~~~~~~g~~~~~~~~~~~-~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          89 GTKDAEAAVAKAVDAGAVKVEVTEAEV-ELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEECCCCHHHH-HTTEEEEEECTTSCEEEEEC
T ss_pred             eecCcceeEEEeecccceEecCccccc-ccCEEEEEECCCCCEEEEeC
Confidence            999999999999999999988765543 23356999999999999975

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.60  E-value=4.4e-16  Score=104.60  Aligned_cols=124  Identities=13%  Similarity=0.154  Sum_probs=90.1

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCcceeEEecCCcEEEEeecCCCCCCCCC--CCCCCCceEE
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNFDGAWLFGHGIGIHLLQSENPDSLPKK--SVINPKDNHL   84 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hl   84 (168)
                      .||-+.+++||.|.|+|++++.+||++ |||+...+....  ....+..+...  ++......+....  ...+.+..|+
T Consensus         3 np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~--~~~l~~~G~i~--ll~~~~~~s~~~~~~~~hg~gv~hi   77 (150)
T d1cjxa1           3 NPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK--NVHLYRQGEIN--LILNNEPNSIASYFAAEHGPSVCGM   77 (150)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS--SEEEEEETTEE--EEEECCSSSHHHHHHHHHSSEEEEE
T ss_pred             CCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce--EEEEEecCcEE--EEecCCCCCHhHhHHhhCCCceEEE
Confidence            567789999999999999999999997 999998764321  33344444433  3333332221111  1356799999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           85 SFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        85 ~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      +|.|+|+++++++++++|+++...+......  ....+++|+|.++.|++...
T Consensus        78 af~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~--~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          78 AFRVKDSQKAYNRALELGAQPIHIDTGPMEL--NLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCCCCCCTTCB--CCCEEECGGGCEEEEECCCS
T ss_pred             EEEeCCHHHHHHHHHHCCCEEcccCCCCCce--eeeEEEcCCCCEEEEECcCC
Confidence            9999999999999999999988776543222  23778899999999998643

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.29  E-value=3.8e-12  Score=89.05  Aligned_cols=99  Identities=16%  Similarity=0.220  Sum_probs=67.5

Q ss_pred             cceeeeEEEEeC--CHHHHHHHHHHccCCeeeccCC----CCCcceeEEecC--CcEEEEeecCCCCCCCCC----CCCC
Q 030972           11 LKSVNHVSLVCR--NISESIDFYQNVLGFVPIRRPG----SFNFDGAWLFGH--GIGIHLLQSENPDSLPKK----SVIN   78 (168)
Q Consensus        11 ~~~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~----~~~~   78 (168)
                      +++|+||++.|+  |+++++.||+++|||+......    ........+...  ...+.+............    ...+
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g   82 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNG   82 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCC
Confidence            578999999997  9999999999999999876432    111111122222  233333333322111111    1245


Q ss_pred             CCceEEEEEeCCHHHHHHHHHHcCCeEEeee
Q 030972           79 PKDNHLSFQCESVGNVEKFLKEMGIKYVRAL  109 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~  109 (168)
                      .|.+||||.|+|+.++.++|+++|+++...|
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            7899999999999999999999999998764

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.28  E-value=6.3e-12  Score=89.10  Aligned_cols=97  Identities=9%  Similarity=0.134  Sum_probs=66.1

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCC-------CCcceeEEe--cCCcEEEEeecCCCCCCCCC---
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGS-------FNFDGAWLF--GHGIGIHLLQSENPDSLPKK---   74 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-------~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~---   74 (168)
                      ....+++|+||++.|+|++++++||+++|||+...+...       .......+.  .+...+.+.+...+......   
T Consensus         3 ~d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~   82 (224)
T d1sp8a2           3 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT   82 (224)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHH
T ss_pred             CCCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHH
Confidence            446689999999999999999999999999987654211       111112222  22345666655443211111   


Q ss_pred             ---CCCCCCceEEEEEeCCHHHHHHHHHHcCC
Q 030972           75 ---SVINPKDNHLSFQCESVGNVEKFLKEMGI  103 (168)
Q Consensus        75 ---~~~~~~~~hl~~~v~dl~~~~~~l~~~g~  103 (168)
                         ...+.|.+||||.|+|+.++.+.|+++|+
T Consensus        83 FL~~~~g~GiqHIAf~vdDI~~av~~L~arGv  114 (224)
T d1sp8a2          83 FLDHHGGPGVQHMALASDDVLRTLREMQARSA  114 (224)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGG
T ss_pred             HHHhccCCCceeEEEEeCCHHHHHHHHHhccc
Confidence               12356899999999999999999998864

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.26  E-value=3.4e-10  Score=74.05  Aligned_cols=109  Identities=14%  Similarity=-0.052  Sum_probs=70.9

Q ss_pred             CCHHHHHHHHHHccCCeeeccCC--CCC------------cceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEE
Q 030972           22 RNISESIDFYQNVLGFVPIRRPG--SFN------------FDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQ   87 (168)
Q Consensus        22 ~D~~~a~~FY~~~LG~~~~~~~~--~~~------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~   87 (168)
                      .|.++|++||+++||+++.....  +..            ...+-+..++..+.+........     ...++..++++.
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~~-----~~~~~~~~~~l~   86 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYP-----YEGIKGCSISLN   86 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSC-----CCCCCSEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCccc-----ccCCCcEEEEEE
Confidence            39999999999999999865321  100            00122334444444433222111     123356788898


Q ss_pred             eCCHH--HHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           88 CESVG--NVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        88 v~dl~--~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      +++.+  +.+.++.++|.+++.++...+ ++.+.++|+||+|+.|+|....
T Consensus        87 ~~~~d~~~~~~~~l~~G~~v~~p~~~~~-wG~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          87 VDSKAEAERLFNALAEGGSVQMPLGPTF-WAASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             CSSHHHHHHHHHHHHTTSEEEEEEEEET-TEEEEEEEECTTSCEEEEEESC
T ss_pred             cCCHHHHHHHHhhcccCceeecCccccC-CCcEEEEEECCCCCEEEEEecC
Confidence            88655  446667778999988877664 4557799999999999998743

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.3e-11  Score=86.59  Aligned_cols=102  Identities=11%  Similarity=0.191  Sum_probs=68.9

Q ss_pred             CCccceeeeEEEEeCC--HHHHHHHHHHccCCeeeccCCCCC-------cceeEEec--CCcEEEEeecCCCCCCCC--C
Q 030972            8 PLHLKSVNHVSLVCRN--ISESIDFYQNVLGFVPIRRPGSFN-------FDGAWLFG--HGIGIHLLQSENPDSLPK--K   74 (168)
Q Consensus         8 ~~~~~~l~hv~l~v~D--~~~a~~FY~~~LG~~~~~~~~~~~-------~~~~~~~~--~~~~~~l~~~~~~~~~~~--~   74 (168)
                      ...+++|+||++.|++  +++++.||+++|||...+.....+       .....+..  +...+.+...........  .
T Consensus        19 ~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~~   98 (210)
T d1sqia2          19 SCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQE   98 (210)
T ss_dssp             CCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHHH
T ss_pred             CCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHHH
Confidence            3458899999999987  999999999999998765432111       11122222  233455544332211111  0


Q ss_pred             ---CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeee
Q 030972           75 ---SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRAL  109 (168)
Q Consensus        75 ---~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~  109 (168)
                         ...+.|.+||||.|+|+.++.++|+++|+++...|
T Consensus        99 fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P  136 (210)
T d1sqia2          99 YVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP  136 (210)
T ss_dssp             HHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCC
T ss_pred             HHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence               13467899999999999999999999999998776

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.18  E-value=5.8e-11  Score=82.50  Aligned_cols=99  Identities=9%  Similarity=0.246  Sum_probs=67.5

Q ss_pred             cceeeeEEEEeC--CHHHHHHHHHHccCCeeeccCCC----CCcc---eeEEecC--CcEEEEeecCCCCCCCC--C---
Q 030972           11 LKSVNHVSLVCR--NISESIDFYQNVLGFVPIRRPGS----FNFD---GAWLFGH--GIGIHLLQSENPDSLPK--K---   74 (168)
Q Consensus        11 ~~~l~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~----~~~~---~~~~~~~--~~~~~l~~~~~~~~~~~--~---   74 (168)
                      +++|+||++.|+  ++++++.||+++|||+.......    ....   ..-+...  ...+.+...........  .   
T Consensus         4 f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL~   83 (199)
T d1t47a2           4 FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLE   83 (199)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHH
T ss_pred             ceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhhh
Confidence            578999999998  99999999999999998764321    0111   1111111  23444443322211110  0   


Q ss_pred             CCCCCCceEEEEEeCCHHHHHHHHHHcCCeEEeee
Q 030972           75 SVINPKDNHLSFQCESVGNVEKFLKEMGIKYVRAL  109 (168)
Q Consensus        75 ~~~~~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~  109 (168)
                      ...++|.+||||.|+|+.++.+.|+++|+++...|
T Consensus        84 ~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          84 FYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             HHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             hcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            12456899999999999999999999999998876

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.10  E-value=1.6e-10  Score=82.02  Aligned_cols=97  Identities=8%  Similarity=0.084  Sum_probs=64.9

Q ss_pred             CCCccceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCCc-------ceeEEe--cCCcEEEEeecCCCCCCCC--C-
Q 030972            7 NPLHLKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFNF-------DGAWLF--GHGIGIHLLQSENPDSLPK--K-   74 (168)
Q Consensus         7 ~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~-------~~~~~~--~~~~~~~l~~~~~~~~~~~--~-   74 (168)
                      ...-+++|+||++.|+|++++.+||+++||+.........+.       ....+.  .+...+.+.+...+.....  . 
T Consensus        16 ~~~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~   95 (230)
T d1sqda2          16 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT   95 (230)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CCCCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHH
Confidence            344589999999999999999999999999988764321111       111111  1234566665543321111  0 


Q ss_pred             ---CCCCCCceEEEEEeCCHHHHHHHHHHcCC
Q 030972           75 ---SVINPKDNHLSFQCESVGNVEKFLKEMGI  103 (168)
Q Consensus        75 ---~~~~~~~~hl~~~v~dl~~~~~~l~~~g~  103 (168)
                         ...+.|.+||||.|+|+.++.+.|+++|.
T Consensus        96 FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          96 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             HHhhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence               13467999999999999999999999754

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.93  E-value=1.1e-07  Score=61.70  Aligned_cols=113  Identities=14%  Similarity=0.085  Sum_probs=69.1

Q ss_pred             eEEEEeCCHHHHHHHHHHccCCeeeccC---C------CCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEE
Q 030972           16 HVSLVCRNISESIDFYQNVLGFVPIRRP---G------SFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSF   86 (168)
Q Consensus        16 hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~   86 (168)
                      ++.+.-.|.++|++||+++||.....+.   .      ......+-+..++..+.+.........     ..+....+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~~-----~~~~~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHAF-----DFTPAFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCSC-----CCCTTEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCCC-----CCCCceEEEE
Confidence            5555556899999999999998754321   1      011112334456666665544322111     1234567888


Q ss_pred             EeCCHHHH--HHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           87 QCESVGNV--EKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        87 ~v~dl~~~--~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      .+++.+.+  +.+..++|.++..++.... ++.+...++||.|+.|.|.-
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~-~g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYG-FSQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCS-SSSEEEEEECTTSCEEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCccccc-ccceEEEEECCCCCEEEEEc
Confidence            88765443  3344456778877665543 33466899999999999863

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.70  E-value=1.1e-06  Score=56.36  Aligned_cols=109  Identities=11%  Similarity=0.012  Sum_probs=64.6

Q ss_pred             eEEEEeC-CHHHHHHHHHHccCCeeecc---CC------CCCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEE
Q 030972           16 HVSLVCR-NISESIDFYQNVLGFVPIRR---PG------SFNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLS   85 (168)
Q Consensus        16 hv~l~v~-D~~~a~~FY~~~LG~~~~~~---~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   85 (168)
                      .-.|... |.++|++||+++||-..+.+   ..      ....-.+-+..++..+.+.......         ....+++
T Consensus         7 ~Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~~---------~~~~s~~   77 (129)
T d1tsja_           7 TTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGT---------ELPISLF   77 (129)
T ss_dssp             EEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC----------------CCCEE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCCC---------CCCEEEE
Confidence            3556665 99999999999996543321   11      0111122344555555544332221         1124577


Q ss_pred             EEeCCHHH---HHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEee
Q 030972           86 FQCESVGN---VEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDC  135 (168)
Q Consensus        86 ~~v~dl~~---~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~  135 (168)
                      +.+++.++   ++++|. .|.++..++...+ ++.+...+.||.|+.|.|..+
T Consensus        78 v~~~~~~e~~~~~~~L~-~gg~v~~p~~~~~-~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          78 VTVKDTIEMERLFNGLK-DEGAILMPKTNMP-PYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             EECSSHHHHHHHHHHHH-TTCEEEEEEEEET-TEEEEEEEECTTSCEEEEEEC
T ss_pred             eccCCHHHHHHHHHHhc-cCCEEeccccccc-ccceEEEEECCCCCEEEEeCC
Confidence            77776555   455665 5667776665543 455779999999999999864

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.09  E-value=0.0099  Score=38.54  Aligned_cols=99  Identities=11%  Similarity=-0.006  Sum_probs=57.9

Q ss_pred             EeCCHHHHHHHHHHccCCe-eecc--CC-C------CCcceeEEecCCcEEEEeecCCCCCCCCCCCCCCCceEEEEEeC
Q 030972           20 VCRNISESIDFYQNVLGFV-PIRR--PG-S------FNFDGAWLFGHGIGIHLLQSENPDSLPKKSVINPKDNHLSFQCE   89 (168)
Q Consensus        20 ~v~D~~~a~~FY~~~LG~~-~~~~--~~-~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~   89 (168)
                      .-.+-++|++||.++||-. +...  .+ .      ...-.+.+..++..+.+.... + .     ...+...+|++.++
T Consensus         9 F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~-~-~-----~~~~~~~sl~l~~d   81 (156)
T d1u69a_           9 YDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGG-P-A-----FRHSEAFSFQVATD   81 (156)
T ss_dssp             ESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECC-T-T-----CCCCTTEEEEEEES
T ss_pred             ECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCC-C-C-----CCCCCCeEEEEecC
Confidence            4579999999999999643 3221  11 0      111223344455554443321 1 1     11234578888888


Q ss_pred             C---HHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           90 S---VGNVEKFLKEMGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        90 d---l~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      |   +++++++|.+.|- +..    ..      .++.|+.|..|.|+...
T Consensus        82 ~~eE~d~~f~~LsegG~-~~~----~~------G~v~DkFGV~Wqi~~~~  120 (156)
T d1u69a_          82 DQAETDRLWNAIVDNGG-EES----AC------GWCRDKWGISWQITPRV  120 (156)
T ss_dssp             SHHHHHHHHHHHHHTTC-EEC----ST------TEEECTTSCEEEEEEHH
T ss_pred             CHHHHHHHHHHHhccCC-CCC----CC------eEEECCCCCEEEeChHH
Confidence            6   4556777776653 221    12      35999999999999753

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.86  E-value=0.02  Score=36.13  Aligned_cols=59  Identities=14%  Similarity=0.115  Sum_probs=38.5

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           79 PKDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .+++|++|.|.|++++.+...+ .|.+.........+......+...-++..++|.....
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   69 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALN   69 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESS
T ss_pred             eeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccC
Confidence            4789999999999999998865 5999866543322222122333334556677776543

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=94.37  E-value=0.19  Score=30.89  Aligned_cols=58  Identities=28%  Similarity=0.364  Sum_probs=42.0

Q ss_pred             CCceEEEEEeCCHHHHHHHHHHcCCeEEeeeeee----------CCeeEEEEEEECCCC-CEEEEEeeC
Q 030972           79 PKDNHLSFQCESVGNVEKFLKEMGIKYVRALVEE----------GGILVEQLFFHDPDG-FMIEICDCD  136 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~----------~g~~~~~~~~~DPdG-~~iel~~~~  136 (168)
                      .++.|+++.|.|+++..+..++.|.++.......          .+.....+++..++| ..++|++..
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~   76 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFL   76 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEE
T ss_pred             CEEeEEEEEeCCHHHHHHHHHHcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeec
Confidence            3679999999999999999998899876543221          122446678888775 567777653

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=94.26  E-value=0.15  Score=29.90  Aligned_cols=52  Identities=21%  Similarity=0.395  Sum_probs=40.3

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++.|+.+.|+|+++..+...+ .|.++....   . ..  .+++.++++..+.+.....
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~---~-~~--~~~~~~~~~~~~~~~~~~~   55 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR---G-NA--FAVMRDNDGFILTLMKGKE   55 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---T-TT--EEEEECTTCCEEEEEECSS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEee---c-Cc--ceeeeecceeeeeeeeeec
Confidence            678999999999999999888 599886532   2 22  2667788899899887654

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=94.20  E-value=0.085  Score=32.43  Aligned_cols=54  Identities=15%  Similarity=0.166  Sum_probs=37.9

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC---CCCcceeEEe---cCCcEEEEeecC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG---SFNFDGAWLF---GHGIGIHLLQSE   66 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~---~~~~~~~l~~~~   66 (168)
                      .+++|+++.|+|++++.+-.++ .|.++.....   ..+....|+.   .+|..++|++.+
T Consensus        85 ~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          85 AGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CcceEEEEecchHHHHHHHHHH-CCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            4799999999999999999998 7998765322   1222233332   256678888753

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=93.85  E-value=0.079  Score=33.82  Aligned_cols=59  Identities=8%  Similarity=0.098  Sum_probs=41.3

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           79 PKDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      .++.|++|.|.|++++.++.++ .|.+.........+......++....+..++|.+...
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~   65 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK   65 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESS
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCC
Confidence            4789999999999999999987 5999875443322221223444445677788888654

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=93.24  E-value=0.25  Score=30.36  Aligned_cols=58  Identities=19%  Similarity=0.395  Sum_probs=40.3

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCC---CCEEEEEeeC
Q 030972           79 PKDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPD---GFMIEICDCD  136 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPd---G~~iel~~~~  136 (168)
                      .|++|+++.|.|+++..+..++ .|.++............+.+++.+..   +..+++....
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   66 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIP   66 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECT
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccc
Confidence            5899999999999999999988 69998765443332334445555544   3455555543

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.36  E-value=0.3  Score=31.11  Aligned_cols=56  Identities=14%  Similarity=0.301  Sum_probs=42.2

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCCC-cceeEE-ecCCcEEEEeecCC
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSFN-FDGAWL-FGHGIGIHLLQSEN   67 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~~~-~~~~~~~~l~~~~~   67 (168)
                      ..++.|+++.+.|+++..+.+++ .|.+......... ...+|+ ..+|..++|++...
T Consensus       114 ~~g~~h~~~~~~d~~~~~~~l~~-~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         114 PRGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             SCBEEEEEEECSCHHHHHHHHHH-TTCEEEECTTSSSSTTCEEEECTTCCEEEEECTTT
T ss_pred             ccceeEEEeeHHHHHHHHHHHHH-CCCEEeeCCccCCceEEEEEECCCCCEEEEEeCCC
Confidence            45889999999999999999997 7999887654322 223444 46678899988654

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.20  E-value=0.6  Score=30.00  Aligned_cols=56  Identities=11%  Similarity=0.261  Sum_probs=38.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeEEeeeeeeCCeeEEEEEEE-CCCCCEEEEEeeC
Q 030972           80 KDNHLSFQCESVGNVEKFLKEMGIKYVRALVEEGGILVEQLFFH-DPDGFMIEICDCD  136 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~-DPdG~~iel~~~~  136 (168)
                      .+.|+++.|.|+++..+..+..|.++.+......+.. ..+++. +...+.+.+....
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~d~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~   61 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVSEDIKDSDGVT-YAAWMHRKQTVHDTALTGGN   61 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEEEEEECTTCCE-EEEEEESSSSSCSEEEEESS
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEEEEEecCCcce-eeeeeccCccccceeccccc
Confidence            5789999999999999988888999876533333322 223333 5566667666543

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=90.43  E-value=0.69  Score=29.03  Aligned_cols=55  Identities=15%  Similarity=0.124  Sum_probs=37.6

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCC-CCCcceeEE-ecCCcEEEEeecCC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPG-SFNFDGAWL-FGHGIGIHLLQSEN   67 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~~~~~~~-~~~~~~~~l~~~~~   67 (168)
                      .+++||+|.|+|++++.+.... +|.++..... ..+.....+ ..++..+.+++...
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~-~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALE-LGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCCS
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCEEcccCCCCCceeeeEEEcCCCCEEEEECcCC
Confidence            5799999999999999999998 9999876543 122222222 23455666666443

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.12  E-value=0.34  Score=30.69  Aligned_cols=56  Identities=14%  Similarity=0.290  Sum_probs=37.0

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEe
Q 030972           79 PKDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICD  134 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~  134 (168)
                      .+++|++|.|.|++++.++.++ .|.+.........+......+.....+..+.+..
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   67 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTA   67 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEec
Confidence            4789999999999999999987 6998766543332222233444444455555544

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=89.77  E-value=0.43  Score=30.50  Aligned_cols=58  Identities=7%  Similarity=0.018  Sum_probs=37.8

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeC
Q 030972           79 PKDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCD  136 (168)
Q Consensus        79 ~~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~  136 (168)
                      .++.|++|.|.|++++.+...+ .|.+.........+...+..+.....+..+.+....
T Consensus        12 ~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (172)
T d1sp8a1          12 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPY   70 (172)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEEC
T ss_pred             CEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeecc
Confidence            4789999999999999999987 699887543332222222233344445556665544

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=86.70  E-value=0.35  Score=32.19  Aligned_cols=31  Identities=16%  Similarity=0.463  Sum_probs=27.0

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRP   43 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~   43 (168)
                      .+++||+|.|+|+.+|++..++ -|++....+
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~-~Gv~fL~~p  113 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKK-IGMRFMTAP  113 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHH-TTCCBCCCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHh-cCCccccCc
Confidence            4799999999999999999998 788876654

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=85.85  E-value=0.97  Score=28.71  Aligned_cols=54  Identities=20%  Similarity=0.318  Sum_probs=33.7

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHc--cCCeeeccCCCCCcceeEE-ecCCcEEEEeec
Q 030972           12 KSVNHVSLVCRNISESIDFYQNV--LGFVPIRRPGSFNFDGAWL-FGHGIGIHLLQS   65 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~--LG~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~   65 (168)
                      ..++||+|.|.|.+...+++..+  .|.+............+|+ ..+|..+++...
T Consensus        74 ~~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          74 GSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             TCEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             cccceEEEEeCChHHHHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEEC
Confidence            36899999999977666666664  5665543222222234444 456778888764

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=85.50  E-value=3.3  Score=26.92  Aligned_cols=75  Identities=8%  Similarity=0.025  Sum_probs=48.4

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccCCCC-CcceeE------EecCCcEEEEeecCCCCCCCCCCCCCCCceEE
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRPGSF-NFDGAW------LFGHGIGIHLLQSENPDSLPKKSVINPKDNHL   84 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   84 (168)
                      ..++|+.++|.+.+.+.+|-+.++..-..-..... +...+.      +..++.++.+++-+-+.....   ...|.-|+
T Consensus        42 ~~~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~~Pl~~~~~~I~ciELP~P~~k~Y---p~eGWEHI  118 (190)
T d1k4na_          42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEKRY---PHEGWEHI  118 (190)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCSSCC---SSCEEEEE
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcCeeCCeeEEEEEcCCCceeCCcEEEEEEeCCCCCCCC---CCCCceEE
Confidence            46899999999999999999998776543221101 111111      234567777777666543222   23588999


Q ss_pred             EEEeC
Q 030972           85 SFQCE   89 (168)
Q Consensus        85 ~~~v~   89 (168)
                      -+-++
T Consensus       119 ElVlp  123 (190)
T d1k4na_         119 EIVLP  123 (190)
T ss_dssp             EEECC
T ss_pred             EEEec
Confidence            99887

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=84.27  E-value=0.96  Score=24.55  Aligned_cols=28  Identities=14%  Similarity=0.191  Sum_probs=24.7

Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeEEee
Q 030972           81 DNHLSFQCESVGNVEKFLKEMGIKYVRA  108 (168)
Q Consensus        81 ~~hl~~~v~dl~~~~~~l~~~g~~~~~~  108 (168)
                      ...+.|.++|.+++.+.|+++|+++...
T Consensus        38 ~~~~vl~vdd~~~a~~~L~~~G~~vl~~   65 (71)
T d2f06a1          38 VANVVIRPSNMDKCIEVLKEKKVDLLAA   65 (71)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCEEECH
T ss_pred             cEEEEEEECCHHHHHHHHHHCCCEEEch
Confidence            3568899999999999999999998764

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=83.25  E-value=3.6  Score=25.49  Aligned_cols=31  Identities=6%  Similarity=0.207  Sum_probs=26.3

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-cCCeEEeeee
Q 030972           80 KDNHLSFQCESVGNVEKFLKE-MGIKYVRALV  110 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~  110 (168)
                      ++.|+++.|.|+++..+...+ .|.++.+...
T Consensus         5 rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~   36 (162)
T d1mpya2           5 RFDHALMYGDELPATYDLFTKVLGFYLAEQVL   36 (162)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cccEEEEECCCHHHHHHHHHHccCCEEEEEEc
Confidence            578999999999999999887 5998876543

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=82.97  E-value=2.2  Score=25.56  Aligned_cols=33  Identities=6%  Similarity=0.083  Sum_probs=24.5

Q ss_pred             cceeeeEEEEe--CCHHHHHHHHHHccCCeeeccCC
Q 030972           11 LKSVNHVSLVC--RNISESIDFYQNVLGFVPIRRPG   44 (168)
Q Consensus        11 ~~~l~hv~l~v--~D~~~a~~FY~~~LG~~~~~~~~   44 (168)
                      -.++.|+.|.+  .|++++.+.+.+ .|.+......
T Consensus        62 ~~~~~h~~~~~~~~d~~~~~~~l~~-~Gv~~~~~~~   96 (140)
T d1npba_          62 ESDYTHYAFTVAEEDFEPLSQRLEQ-AGVTIWKQNK   96 (140)
T ss_dssp             GSCSCEEEEECCHHHHHHHHHHHHH-TTCCEEECCC
T ss_pred             CCccceeeeechHHHHHHHHHHHHH-CCCeEeecCC
Confidence            34567888877  778888888887 7988766443

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=82.96  E-value=2  Score=25.74  Aligned_cols=57  Identities=12%  Similarity=0.181  Sum_probs=35.9

Q ss_pred             cceeeeEEEEeCCHHHHHHHHHHc--cCCeeeccCC-CCCcceeEE-ecCCcEEEEeecCC
Q 030972           11 LKSVNHVSLVCRNISESIDFYQNV--LGFVPIRRPG-SFNFDGAWL-FGHGIGIHLLQSEN   67 (168)
Q Consensus        11 ~~~l~hv~l~v~D~~~a~~FY~~~--LG~~~~~~~~-~~~~~~~~~-~~~~~~~~l~~~~~   67 (168)
                      ..+.+|+++.|.|.+...++|+.+  .|.+...... ..+...+|+ ..+|..++|+....
T Consensus        73 ~~~~~hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          73 PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             CCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSCC
T ss_pred             cccCceEEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCCC
Confidence            345789999999988877777775  5676654322 112223433 45667888876544

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=81.04  E-value=0.85  Score=30.18  Aligned_cols=31  Identities=23%  Similarity=0.395  Sum_probs=27.0

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCeeeccC
Q 030972           12 KSVNHVSLVCRNISESIDFYQNVLGFVPIRRP   43 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~   43 (168)
                      .+++||+|.|+|+.++++-.++ -|++....+
T Consensus        88 ~GiQHIAl~tdDI~~av~~L~~-~G~~fL~~p  118 (199)
T d1t47a2          88 AGVQHIALNTGDIVETVRTMRA-AGVQFLDTP  118 (199)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH-TTCCBCCCC
T ss_pred             CcceEEEEEcCCHHHHHHHHHH-cCCCCCCCC
Confidence            4899999999999999999997 888776654

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=80.96  E-value=0.65  Score=31.35  Aligned_cols=22  Identities=18%  Similarity=0.341  Sum_probs=20.5

Q ss_pred             ceeeeEEEEeCCHHHHHHHHHH
Q 030972           12 KSVNHVSLVCRNISESIDFYQN   33 (168)
Q Consensus        12 ~~l~hv~l~v~D~~~a~~FY~~   33 (168)
                      .+++||+|.|+|+.++++..++
T Consensus        90 ~GiqHIAf~vdDI~~av~~L~a  111 (224)
T d1sp8a2          90 PGVQHMALASDDVLRTLREMQA  111 (224)
T ss_dssp             SEEEEEEEEETTHHHHHHHHHT
T ss_pred             CCceeEEEEeCCHHHHHHHHHh
Confidence            4799999999999999999986

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=80.78  E-value=3.2  Score=24.32  Aligned_cols=57  Identities=18%  Similarity=0.222  Sum_probs=35.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-cCCeEEeeeeeeCCeeEEEEEEECCCCCEEEEEeeCC
Q 030972           80 KDNHLSFQCESVGNVEKFLKE-MGIKYVRALVEEGGILVEQLFFHDPDGFMIEICDCDN  137 (168)
Q Consensus        80 ~~~hl~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~~~~~  137 (168)
                      ++.|+.+.|.|+++..+...+ .|.++...............++ ...+..+++.....
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   61 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFF-LIGDIWVAIMQGEK   61 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEE-EETTEEEEEEECCC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEE-ecCCEEEeeccccc
Confidence            679999999999999888887 4988765432221111111222 33556667666543