Citrus Sinensis ID: 030992

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MNKMDDFYFYIMTIIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVILQHA
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEcccccHHHHHHHHHHccccccccEEEEEEccccHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccEEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccHHHHHHHHHHHccHcccccEEEEEEcccHcHHHHHHHHHHHHHHccccccccEEEEEEcccHHccccHHHHHHHHHHHHHHHHHHHHHccccEEccHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MNKMDDFYFYIMTIIATSVAIFLIRLLHVLYLTgksrrlkspqplstLIVLGSGGHTAEMMNLLSVLqmdrftprFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVILQHA
Flexible Loop (DISEMBL)
MNKMDDFYFYIMTIIATSVAIFLIRLLHVLYLTGksrrlkspqplSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVILQHA
Low Complexity Region (SEG)
MNKMDDFYFYIMTIIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVwttllatthalwlMVKIRPQVVMNLSLARVFFSSLVILQHA
Disordered region (IsUnstruct)
*****DFYFYIMTIIATSVAIFLIRLLHVLYLTGKSRRL***QPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVIL***
Disordered Region (DISOPRED)
****DDFYFYIMTIIATSVAIFLIRLLHV******************LIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVF***********GSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVILQHA
Disordered Region (DISEMBL)
MNKMDDFYFYIMTIIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVILQHA
Disordered Region (DISPRO)
*NKMDDFYFYIMTIIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVILQHA
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooHHHHHHHHHHHHHHHHiiiRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNKMDDFYFYIMTIIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVILQHA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	168	2.2.26 [Sep-21-2011]
Q5A5N6	219	UDP-N-acetylglucosamine t	N/A	no	0.761	0.584	0.385	2e-16
Q6AY85	216	UDP-N-acetylglucosamine t	yes	no	0.773	0.601	0.364	6e-12
Q96F25	216	UDP-N-acetylglucosamine t	yes	no	0.589	0.458	0.367	2e-11
Q9D081	217	UDP-N-acetylglucosamine t	yes	no	0.809	0.626	0.316	3e-11
Q6CF02	216	UDP-N-acetylglucosamine t	yes	no	0.589	0.458	0.359	4e-11
O14199	210	UDP-N-acetylglucosamine t	yes	no	0.619	0.495	0.330	2e-09
Q6BMD0	232	UDP-N-acetylglucosamine t	yes	no	0.476	0.344	0.345	1e-08
P0CM10	229	UDP-N-acetylglucosamine t	yes	no	0.541	0.397	0.375	9e-08
P0CM11	229	UDP-N-acetylglucosamine t	N/A	no	0.541	0.397	0.375	9e-08
P38242	237	UDP-N-acetylglucosamine t	yes	no	0.607	0.430	0.296	0.0003

>sp|Q5A5N6|ALG14_CANAL UDP-N-acetylglucosamine transferase subunit ALG14 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALG14 PE=3 SV=1

 Score = 85.5 bits (210), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 82/140 (58%), Gaps = 12/140 (8%)

Query: 15  IATSVAIFLIRLLHVL----YLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMD 70
           IAT + I L+RLL +L      T   ++ K  Q     I+LGSGGHT EMM ++S L M 
Sbjct: 14  IATPILIVLVRLLFILPSLRLPTSVKKKKKLIQECQLSILLGSGGHTGEMMRIISKLDMG 73

Query: 71  RFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTT 130
           + + R +I  + DN SL KA+ +E          G+S+Q++ I R+R VGQSY++S+ TT
Sbjct: 74  KVS-RTWIYTSGDNASLAKAQDYERK-------SGTSSQYIPIPRARTVGQSYISSIPTT 125

Query: 131 LLATTHALWLMVKIRPQVVM 150
           + +   +   M+K RP V++
Sbjct: 126 IYSFLFSAIAMLKHRPAVIL 145

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway. Anchors the catalytic subunit ALG13 to the ER.
Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

>sp|Q6AY85|ALG14_RAT UDP-N-acetylglucosamine transferase subunit ALG14 homolog OS=Rattus norvegicus GN=Alg14 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 7/137 (5%)

Query: 16  ATSVAIFLI-RLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTP 74
           A  +A+ LI RL  VL    +S  +   Q L  LIV GSGGHTAE++ L+  L    ++P
Sbjct: 11  AGGLAVLLIVRLWAVL----RSHPVTPRQSLGLLIVAGSGGHTAEILRLVGSLS-GAYSP 65

Query: 75  RFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFM-QIYRSREVGQSYVTSVWTTLLA 133
           R Y+ A +D MS +K    E +          +  ++ +I RSREV QS+++SV+TTL +
Sbjct: 66  RHYVIAESDEMSAKKIHSLELARAQNDSTTEHTEYYLHRIPRSREVRQSWLSSVFTTLYS 125

Query: 134 TTHALWLMVKIRPQVVM 150
              +  L+ +I+P +V+
Sbjct: 126 IWFSFPLVHRIKPDLVL 142

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway. Anchors the catalytic subunit ALG13 to the ER.

Rattus norvegicus (taxid: 10116)

>sp|Q96F25|ALG14_HUMAN UDP-N-acetylglucosamine transferase subunit ALG14 homolog OS=Homo sapiens GN=ALG14 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 18/117 (15%)

Query: 43  QPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKV 102
           + LS L+V GSGGHT E++ LL  L  + ++PR Y+ A TD MS  K   FE      + 
Sbjct: 35  ESLSILVVAGSGGHTTEILRLLGSLS-NAYSPRHYVIADTDEMSANKINSFE----LDRA 89

Query: 103 IKGSSAQFMQIY-----RSREVGQSYVTSVWTTLLATTHALW----LMVKIRPQVVM 150
            +  S  + + Y     RSREV QS+ ++V+TTL    H++W    L+ +++P +V+
Sbjct: 90  DRDPSNMYTKYYIHRIPRSREVQQSWPSTVFTTL----HSMWLSFPLIHRVKPDLVL 142

May be involved in protein N-glycosylation. May play a role in the second step of the dolichol-linked oligosaccharide pathway. May anchor the catalytic subunit ALG13 to the ER.

Homo sapiens (taxid: 9606)

>sp|Q9D081|ALG14_MOUSE UDP-N-acetylglucosamine transferase subunit ALG14 homolog OS=Mus musculus GN=Alg14 PE=2 SV=1

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 3/139 (2%)

Query: 14  IIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFT 73
           I+A + A  +I L   L+       +   + L  LIV GSGGHT E++ L+  L  + ++
Sbjct: 6   ILAATAAGLVILLFQRLWTVLGPHHVTPRESLRLLIVAGSGGHTTEILRLVGSLS-NAYS 64

Query: 74  PRFYIAAATDNMSLQKARVFED--SLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTL 131
           PR Y+ A +D MS +K    E+     +    +       +I RSREV QS+++SV+TT 
Sbjct: 65  PRHYVIAESDEMSAKKIHSLEELSRAQNDSTTEYPKYHLHRIPRSREVRQSWLSSVFTTF 124

Query: 132 LATTHALWLMVKIRPQVVM 150
            +   +  L+++I+P +V+
Sbjct: 125 YSMWFSFPLVLRIKPDLVL 143

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway. Anchors the catalytic subunit ALG13 to the ER.

Mus musculus (taxid: 10090)

>sp|Q6CF02|ALG14_YARLI UDP-N-acetylglucosamine transferase subunit ALG14 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG14 PE=3 SV=1

 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 65/103 (63%), Gaps = 4/103 (3%)

Query: 48  LIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSS 107
           ++++GSGGHT EM+ +L  L++  +  R Y++++ D  SL+K +V E +   K  IK  +
Sbjct: 44  MVMMGSGGHTGEMLRMLKTLKLQSYAKRVYVSSSGDVDSLEKVKVLESTT--KTDIK--T 99

Query: 108 AQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVM 150
                I R+R+VGQSY +SV T+ ++   A+ L+ K +P V++
Sbjct: 100 MVLENIPRARKVGQSYPSSVITSAVSFAVAVKLVHKHKPHVIV 142

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|O14199|ALG14_SCHPO UDP-N-acetylglucosamine transferase subunit alg14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg14 PE=3 SV=1

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)

Query: 40  KSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLH 99
           K P     L+  GSGGHT EM+NLL+ L    ++ R Y+A + D MS+ KA +  +SL  
Sbjct: 30  KKPFQKHLLVFFGSGGHTGEMLNLLNALDDKLYSVRSYVAGSDDTMSVSKASLLSNSLPS 89

Query: 100 KKVIKGSSAQFMQIYRSREVGQSYV----TSVWTTLLATTHALWLMVKIRPQVVM 150
            K      ++  ++ R+R V QS++    T+ W+ L + +   W    I P V++
Sbjct: 90  VK------SKIFKVPRARYVKQSWLTTPFTAFWSLLGSISVIFWNPFGI-PDVIL 137

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway. Anchors the catalytic subunit alg13 to the ER.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q6BMD0|ALG14_DEBHA UDP-N-acetylglucosamine transferase subunit ALG14 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ALG14 PE=3 SV=2

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 55/84 (65%), Gaps = 4/84 (4%)

Query: 48  LIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSS 107
           +I LGSGGHT EMM +L+ + ++ F  R ++ ++ D+ S+ K + +ED  L     K   
Sbjct: 58  MIFLGSGGHTGEMMRILANVDLNNFN-RTWVTSSGDSTSILKCKKYEDERLTSGQNK--- 113

Query: 108 AQFMQIYRSREVGQSYVTSVWTTL 131
           + ++ ++R+R VG+S ++SV++T+
Sbjct: 114 SDYLVLHRARTVGESIISSVFSTV 137

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway. Anchors the catalytic subunit ALG13 to the ER.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

>sp|P0CM10|ALG14_CRYNJ UDP-N-acetylglucosamine transferase subunit ALG14 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ALG14 PE=3 SV=1

 Score = 56.2 bits (134), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 49  IVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSA 108
           + LGSGGHT+EM  LLS L  +R+ PR YI    D++SL+     E S     +I     
Sbjct: 49  VFLGSGGHTSEMKALLSTLDYERYQPRTYIYCHGDDLSLRAVSDIESS--KGGLISSKMY 106

Query: 109 QFMQIYRSREVGQ---SYVTSVWTTLLATTHALWLM 141
             + + R+R VGQ   S + SV  TL      L+L+
Sbjct: 107 YLLSLPRARRVGQPLLSTMVSVLKTLYIAALRLFLI 142

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway. Anchors the catalytic subunit ALG13 to the ER.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

>sp|P0CM11|ALG14_CRYNB UDP-N-acetylglucosamine transferase subunit ALG14 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ALG14 PE=3 SV=1

 Score = 56.2 bits (134), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 49  IVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSA 108
           + LGSGGHT+EM  LLS L  +R+ PR YI    D++SL+     E S     +I     
Sbjct: 49  VFLGSGGHTSEMKALLSTLDYERYQPRTYIYCHGDDLSLRAVSDIESS--KGGLISSKMY 106

Query: 109 QFMQIYRSREVGQ---SYVTSVWTTLLATTHALWLM 141
             + + R+R VGQ   S + SV  TL      L+L+
Sbjct: 107 YLLSLPRARRVGQPLLSTMVSVLKTLYIAALRLFLI 142

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway. Anchors the catalytic subunit ALG13 to the ER.

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

>sp|P38242|ALG14_YEAST UDP-N-acetylglucosamine transferase subunit ALG14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALG14 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 38  RLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSL 97
           R  S +PL   + LGSGGHT EM+ LL   Q             +D  S Q+   F    
Sbjct: 48  RKSSKKPLKIFVFLGSGGHTGEMIRLLENYQDLLLGKSIVYLGYSDEASRQRFAHFIKKF 107

Query: 98  LHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIR 145
            H KV      ++ +  ++REV  + + SV T +     +   +V+IR
Sbjct: 108 GHCKV------KYYEFMKAREVKATLLQSVKTIIGTLVQSFVHVVRIR 149

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway. Anchors the catalytic subunit ALG13 to the ER.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
2832697	182	putative protein [Arabidopsis thaliana]	0.773	0.714	0.707	4e-48
297800244	233	hypothetical protein ARALYDRAFT_493043 [	0.845	0.609	0.640	8e-48
30684334	233	beta-1,4-N-acetylglucosaminyltransferase	0.761	0.549	0.703	1e-47
359483837	235	PREDICTED: UDP-N-acetylglucosamine trans	0.892	0.638	0.603	4e-47
449462031	222	PREDICTED: UDP-N-acetylglucosamine trans	0.827	0.626	0.673	3e-46
255626833	163	unknown [Glycine max]	0.904	0.932	0.603	7e-46
77999301	300	unknown [Solanum tuberosum]	0.875	0.49	0.6	2e-45
224059925	233	predicted protein [Populus trichocarpa]	0.886	0.639	0.612	2e-45
255635606	233	unknown [Glycine max]	0.892	0.643	0.598	3e-45
356519078	233	PREDICTED: UDP-N-acetylglucosamine trans	0.892	0.643	0.598	3e-45

>gi|2832697|emb|CAA16795.1| putative protein [Arabidopsis thaliana] gi|7268616|emb|CAB78825.1| putative protein [Arabidopsis thaliana]

 Score =  195 bits (496), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 92/130 (70%), Positives = 109/130 (83%)

Query: 23  LIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAAT 82
           ++R+L+V+Y  GK     + Q  +TLIVLGSGGHTAEM++LLSVL+ DRFTPRFYIAAAT
Sbjct: 19  MVRVLYVIYRCGKPLPKGASQSFTTLIVLGSGGHTAEMLSLLSVLRKDRFTPRFYIAAAT 78

Query: 83  DNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMV 142
           DNMSLQKAR FEDSL  K  +K +S+QFMQIYRSREVGQSYVTSVWTT++A  HALWLM+
Sbjct: 79  DNMSLQKARSFEDSLAEKPAVKEASSQFMQIYRSREVGQSYVTSVWTTIVAILHALWLMI 138

Query: 143 KIRPQVVMNL 152
           +IRPQVV  L
Sbjct: 139 RIRPQVVYTL 148

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800244|ref|XP_002868006.1| hypothetical protein ARALYDRAFT_493043 [Arabidopsis lyrata subsp. lyrata] gi|297313842|gb|EFH44265.1| hypothetical protein ARALYDRAFT_493043 [Arabidopsis lyrata subsp. lyrata]

 Score =  194 bits (494), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 115/142 (80%)

Query: 9   FYIMTIIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQ 68
           F I  ++  ++ + ++R+L+V+Y  GK       Q  +TLIVLGSGGHTAEM++LLSVL+
Sbjct: 16  FSIGLLMILAIVLLMVRVLYVIYRCGKPLPKGVSQSFTTLIVLGSGGHTAEMLSLLSVLR 75

Query: 69  MDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVW 128
            DRFTPRFYIAAATDNMSLQKAR FEDS+  K  +K +S+QFMQIYRSREVGQSYVTSVW
Sbjct: 76  KDRFTPRFYIAAATDNMSLQKARSFEDSVAEKPAVKEASSQFMQIYRSREVGQSYVTSVW 135

Query: 129 TTLLATTHALWLMVKIRPQVVM 150
           TT++A  HALWLM++IRPQV++
Sbjct: 136 TTIVAIVHALWLMIRIRPQVIL 157

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30684334|ref|NP_193557.2| beta-1,4-N-acetylglucosaminyltransferase [Arabidopsis thaliana] gi|29824411|gb|AAP04165.1| unknown protein [Arabidopsis thaliana] gi|30793785|gb|AAP40345.1| unknown protein [Arabidopsis thaliana] gi|110737161|dbj|BAF00530.1| hypothetical protein [Arabidopsis thaliana] gi|332658614|gb|AEE84014.1| beta-1,4-N-acetylglucosaminyltransferase [Arabidopsis thaliana]

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 90/128 (70%), Positives = 109/128 (85%)

Query: 23  LIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAAT 82
           ++R+L+V+Y  GK     + Q  +TLIVLGSGGHTAEM++LLSVL+ DRFTPRFYIAAAT
Sbjct: 30  MVRVLYVIYRCGKPLPKGASQSFTTLIVLGSGGHTAEMLSLLSVLRKDRFTPRFYIAAAT 89

Query: 83  DNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMV 142
           DNMSLQKAR FEDSL  K  +K +S+QFMQIYRSREVGQSYVTSVWTT++A  HALWLM+
Sbjct: 90  DNMSLQKARSFEDSLAEKPAVKEASSQFMQIYRSREVGQSYVTSVWTTIVAILHALWLMI 149

Query: 143 KIRPQVVM 150
           +IRPQV++
Sbjct: 150 RIRPQVIL 157

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483837|ref|XP_002274574.2| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 homolog [Vitis vinifera]

 Score =  192 bits (488), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 96/159 (60%), Positives = 121/159 (76%), Gaps = 9/159 (5%)

Query: 1   MNKMDDFYFYIMT------IIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSG 54
           M K +   F  MT      ++ T + + L R+L+++Y +GK     +PQ +STLIVLGSG
Sbjct: 1   MEKGNGCCFSAMTSNPTILVLVTIITVILTRVLYIMYQSGKPLHNTAPQSVSTLIVLGSG 60

Query: 55  GHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKG---SSAQFM 111
           GHTAEM+NLLS+LQ DRFTPRFYIAAATDNMSLQKA + E SL+  +V+KG    SAQFM
Sbjct: 61  GHTAEMLNLLSMLQKDRFTPRFYIAAATDNMSLQKAHLMEKSLVFFEVVKGKALESAQFM 120

Query: 112 QIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVM 150
           QIYRSREVGQSY+TSV TT++A  HALW+M+KIRPQV++
Sbjct: 121 QIYRSREVGQSYITSVVTTIIAIAHALWIMIKIRPQVIL 159

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462031|ref|XP_004148745.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform 1 [Cucumis sativus] gi|449462033|ref|XP_004148746.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform 2 [Cucumis sativus] gi|449516033|ref|XP_004165052.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform 1 [Cucumis sativus] gi|449516035|ref|XP_004165053.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform 2 [Cucumis sativus]

 Score =  189 bits (481), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 95/141 (67%), Positives = 115/141 (81%), Gaps = 2/141 (1%)

Query: 11  IMTIIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMD 70
           I T+I  S+++ L R+L+V+Y +G+  R KS  P+STLIVLGSGGHTAEM+N+LSVLQ D
Sbjct: 7   IATVI-LSISLILSRILYVIYWSGRPLRNKSLGPVSTLIVLGSGGHTAEMLNVLSVLQKD 65

Query: 71  RFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSS-AQFMQIYRSREVGQSYVTSVWT 129
            F+PRFYIAAATDNMSLQKAR +E+ L  K   +    AQFMQIYRSREVGQSY TSVWT
Sbjct: 66  LFSPRFYIAAATDNMSLQKARTYENQLADKNEAEVDKIAQFMQIYRSREVGQSYFTSVWT 125

Query: 130 TLLATTHALWLMVKIRPQVVM 150
           TL+AT HALWLM+KIRPQV++
Sbjct: 126 TLIATLHALWLMIKIRPQVIL 146

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255626833|gb|ACU13761.1| unknown [Glycine max]

 Score =  188 bits (477), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 96/159 (60%), Positives = 122/159 (76%), Gaps = 7/159 (4%)

Query: 1   MNKMDDFYFYIMTIIAT-SVAIF-----LIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSG 54
           M+K +   F  +T IA  S AIF     L+RLL+V+Y + +S   +  +P STLI+LGSG
Sbjct: 1   MDKSNGCRFSSVTSIAVFSSAIFVVTLILVRLLYVMYCSSRSLSKRVLKPASTLIILGSG 60

Query: 55  GHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIK-GSSAQFMQI 113
           GHTAEM+NLL+VLQ DRF PRFYIAAATDNMSLQKA++ E+SL  +   +   +AQFM+I
Sbjct: 61  GHTAEMLNLLAVLQKDRFKPRFYIAAATDNMSLQKAQLLENSLAAENAARVTDTAQFMKI 120

Query: 114 YRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNL 152
           YRSREVGQSY+TS+WTTL+A  HALWLM+KIRP+VV +L
Sbjct: 121 YRSREVGQSYITSIWTTLIAMVHALWLMIKIRPEVVPSL 159

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|77999301|gb|ABB16997.1| unknown [Solanum tuberosum]

 Score =  187 bits (474), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/160 (60%), Positives = 122/160 (76%), Gaps = 13/160 (8%)

Query: 1   MNKMDDFYFYIMTIIATSVAIFL------IRLLHVLYLTGKSRRL---KSPQPLSTLIVL 51
           M K D   F I T+ ++++A+ L      + ++ ++Y+  +SR+    KSP+ LSTLIVL
Sbjct: 1   MEKGD---FCISTMASSNIAVLLTIGVITVLVIRIIYVINRSRKPLHSKSPRSLSTLIVL 57

Query: 52  GSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKG-SSAQF 110
           GSGGHTAEM+NLL VLQ +RF PR+YIAAATDNMSLQKA VFEDSLL K+ +K     +F
Sbjct: 58  GSGGHTAEMLNLLYVLQTERFKPRYYIAAATDNMSLQKAHVFEDSLLGKEALKEVGGPEF 117

Query: 111 MQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVM 150
           MQIYRSREVGQSY+TSV TTL+A  HALWLM+KIRPQV++
Sbjct: 118 MQIYRSREVGQSYITSVGTTLVAIAHALWLMIKIRPQVIL 157

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059925|ref|XP_002300014.1| predicted protein [Populus trichocarpa] gi|222847272|gb|EEE84819.1| predicted protein [Populus trichocarpa]

 Score =  186 bits (473), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/155 (61%), Positives = 120/155 (77%), Gaps = 6/155 (3%)

Query: 2   NKMDD----FYFYIMTIIATSVAIFLIRLLHVLYLTGKS-RRLKSPQPLSTLIVLGSGGH 56
           N+ DD    F   I+T+ A+ V I + R+L++L  +GK  R  KSP+PLSTLIVLGSGGH
Sbjct: 3   NQHDDNCCLFTPSIITVTASVVLIAITRVLYILCQSGKPLRPSKSPKPLSTLIVLGSGGH 62

Query: 57  TAEMMNLLSVL-QMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYR 115
           TAEM+N+L+VL Q DRF PRFY+AAATDNMSLQKA + E+++ +    KG S QF+QIYR
Sbjct: 63  TAEMINVLNVLLQKDRFCPRFYVAAATDNMSLQKAYLLEENVFNLSGGKGGSTQFLQIYR 122

Query: 116 SREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVM 150
           SREVGQSY+TS+ TT LA  HALWLM++IRPQVV+
Sbjct: 123 SREVGQSYITSIGTTFLALVHALWLMIRIRPQVVL 157

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255635606|gb|ACU18153.1| unknown [Glycine max]

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 94/157 (59%), Positives = 121/157 (77%), Gaps = 7/157 (4%)

Query: 1   MNKMDDFYFYIMTIIAT-SVAIF-----LIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSG 54
           M+K +   F  +T IA  S AIF     L+RLL+V+Y + +S   +  +P STLI+LGSG
Sbjct: 1   MDKSNGCRFSSVTSIAVFSSAIFVVTLILVRLLYVMYCSSRSLSKRVLKPASTLIILGSG 60

Query: 55  GHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIK-GSSAQFMQI 113
           GHTAEM+NLL+VLQ DRF PRFYIAAATDNMSLQKA++ E+SL  +   +   +AQFM+I
Sbjct: 61  GHTAEMLNLLAVLQKDRFKPRFYIAAATDNMSLQKAQLLENSLAAENAARVTDTAQFMKI 120

Query: 114 YRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVM 150
           YRSREVGQSY+TS+WTTL+A  HALWLM+KIRP+V++
Sbjct: 121 YRSREVGQSYITSIWTTLIAMVHALWLMIKIRPEVIL 157

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519078|ref|XP_003528201.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 homolog [Glycine max]

 Score =  186 bits (471), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 94/157 (59%), Positives = 121/157 (77%), Gaps = 7/157 (4%)

Query: 1   MNKMDDFYFYIMTIIAT-SVAIF-----LIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSG 54
           M+K +   F  +T IA  S AIF     L+RLL+V+Y + +S   +  +P STLI+LGSG
Sbjct: 1   MDKSNGCRFSSVTSIAVFSSAIFVVTLILVRLLYVMYCSSRSLSKRVLKPASTLIILGSG 60

Query: 55  GHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIK-GSSAQFMQI 113
           GHTAEM+NLL+VLQ DRF PRFYIAAATDNMSLQKA++ E+SL  +   +   +AQFM+I
Sbjct: 61  GHTAEMLNLLAVLQKDRFKPRFYIAAATDNMSLQKAQLLENSLAAENAARVTDTAQFMKI 120

Query: 114 YRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVM 150
           YRSREVGQSY+TS+WTTL+A  HALWLM+KIRP+V++
Sbjct: 121 YRSREVGQSYITSIWTTLIAMVHALWLMIKIRPEVIL 157

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
TAIR|locus:2141926	233	AT4G18230 "AT4G18230" [Arabido	0.845	0.609	0.591	9.9e-39
CGD|CAL0004350	219	orf19.5363 [Candida albicans (	0.791	0.607	0.365	2.3e-16
ZFIN|ZDB-GENE-041010-195	219	alg14 "asparagine-linked glyco	0.821	0.630	0.342	1.3e-13
WB|WBGene00019725	279	hpo-16 [Caenorhabditis elegans	0.898	0.541	0.305	4.5e-13
UNIPROTKB|Q96F25	216	ALG14 "UDP-N-acetylglucosamine	0.809	0.629	0.312	5e-12
RGD|1312003	216	Alg14 "ALG14, UDP-N-acetylgluc	0.803	0.625	0.326	1.7e-11
MGI|MGI:1914039	217	Alg14 "asparagine-linked glyco	0.809	0.626	0.294	7.4e-11
POMBASE|SPAC5D6.06c	210	alg14 "UDP-GlcNAc transferase	0.636	0.509	0.350	4.1e-10
ASPGD|ASPL0000027521	301	AN5736 [Emericella nidulans (t	0.642	0.358	0.330	1.3e-08
DICTYBASE|DDB_G0290339	398	ugt1 "putative glycosyltransfe	0.595	0.251	0.327	1.4e-08

TAIR|locus:2141926 AT4G18230 "AT4G18230" [Arabidopsis thaliana (taxid:3702)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 84/142 (59%), Positives = 105/142 (73%)

Query:     9 FYIMTIIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQ 68
             F I  +I  ++ + ++R+L+V+Y  GK     + Q  +TLIVLGSGGHTAEM++LLSVL+
Sbjct:    16 FSIGLLIILAIVLLMVRVLYVIYRCGKPLPKGASQSFTTLIVLGSGGHTAEMLSLLSVLR 75

Query:    69 MDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVX 128
              DRFTPRFYIAAATDNMSLQKAR FEDSL  K  +K +S+QFMQIYRSREVGQSYVTSV 
Sbjct:    76 KDRFTPRFYIAAATDNMSLQKARSFEDSLAEKPAVKEASSQFMQIYRSREVGQSYVTSVW 135

Query:   129 XXXXXXXXXXXXMVKIRPQVVM 150
                         M++IRPQV++
Sbjct:   136 TTIVAILHALWLMIRIRPQVIL 157

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

CGD|CAL0004350 orf19.5363 [Candida albicans (taxid:5476)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 53/145 (36%), Positives = 81/145 (55%)

Query:    10 YIMTIIATSVAIFLIRLLHVL----YLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLS 65
             + +  IAT + I L+RLL +L      T   ++ K  Q     I+LGSGGHT EMM ++S
Sbjct:     9 FSIAFIATPILIVLVRLLFILPSLRLPTSVKKKKKLIQECQLSILLGSGGHTGEMMRIIS 68

Query:    66 VLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVT 125
              L M + + R +I  + DN SL KA+ +E     +K   G+S+Q++ I R+R VGQSY++
Sbjct:    69 KLDMGKVS-RTWIYTSGDNASLAKAQDYE-----RK--SGTSSQYIPIPRARTVGQSYIS 120

Query:   126 SVXXXXXXXXXXXXXMVKIRPQVVM 150
             S+             M+K RP V++
Sbjct:   121 SIPTTIYSFLFSAIAMLKHRPAVIL 145

GO:0043541 "UDP-N-acetylglucosamine transferase complex" evidence=IEA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

GO:0043495 "protein anchor" evidence=IEA

GO:0004577 "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=IEA

ZFIN|ZDB-GENE-041010-195 alg14 "asparagine-linked glycosylation 14 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 50/146 (34%), Positives = 75/146 (51%)

Query:     9 FYIMT-IIATSVAI---FLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLL 64
             F +++ +I T++ +   F++RL  VL   G   +      +S L+V GSGGHT E++ LL
Sbjct:     4 FVVLSGVILTALLLVTGFILRLFVVLR-NGPEYKPGQKGSVSVLVVAGSGGHTTEIIRLL 62

Query:    65 SVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYV 124
               L    + PR Y+ A TD MS +K R FE     +K    S     +I RSREV QS+ 
Sbjct:    63 GSLSHS-YNPRHYVIADTDKMSEEKIRTFEAE--REKSDSTSQFTLQRIPRSREVRQSWS 119

Query:   125 TSVXXXXXXXXXXXXXMVKIRPQVVM 150
             +SV             + ++RP VV+
Sbjct:   120 SSVLSSLNALFSSVPLVFRLRPDVVL 145

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

WB|WBGene00019725 hpo-16 [Caenorhabditis elegans (taxid:6239)]

 Score = 173 (66.0 bits), Expect = 4.5e-13, P = 4.5e-13
 Identities = 51/167 (30%), Positives = 78/167 (46%)

Query:     8 YFYIMTIIATSV-AIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSV 66
             +F++  +I   V  +       V +    ++ +      S  +VLGSGGHT+EMM L+  
Sbjct:     5 FFFVTAVILFGVLCLTAFMAFQVRHSNHSAKNMPKKDTASLCVVLGSGGHTSEMMELVKH 64

Query:    67 LQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTS 126
                + F  R YI A TD MS  KA      + H+K          +I RSREVGQSY+TS
Sbjct:    65 FG-EEFDERTYIIADTDTMSEDKA------INHEKSRNNEKFCIEKIPRSREVGQSYLTS 117

Query:   127 VXXXXXXXXXXXXXMVKIRPQ-VVMN-------LSLARVFFSSLVIL 165
             +             + +IRP  +V+N       ++LA  FF  + ++
Sbjct:   118 IGSTINATAFAVKLIYRIRPDLIVLNGPGTCIPVALAAAFFDIIRLI 164

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q96F25 ALG14 "UDP-N-acetylglucosamine transferase subunit ALG14 homolog" [Homo sapiens (taxid:9606)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 44/141 (31%), Positives = 74/141 (52%)

Query:    11 IMTIIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMD 70
             ++   A +VA+FLI  + V+    +S  +   + LS L+V GSGGHT E++ LL  L  +
Sbjct:     6 VLAAAAGAVAVFLILRIWVVL---RSMDVTPRESLSILVVAGSGGHTTEILRLLGSLS-N 61

Query:    71 RFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFM-QIYRSREVGQSYVTSVXX 129
              ++PR Y+ A TD MS  K   FE     +      +  ++ +I RSREV QS+ ++V  
Sbjct:    62 AYSPRHYVIADTDEMSANKINSFELDRADRDPSNMYTKYYIHRIPRSREVQQSWPSTVFT 121

Query:   130 XXXXXXXXXXXMVKIRPQVVM 150
                        + +++P +V+
Sbjct:   122 TLHSMWLSFPLIHRVKPDLVL 142

GO:0016021 "integral to membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

RGD|1312003 Alg14 "ALG14, UDP-N-acetylglucosaminyltransferase subunit" [Rattus norvegicus (taxid:10116)]

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 47/144 (32%), Positives = 77/144 (53%)

Query:    11 IMTIIATS--VAIFLI-RLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVL 67
             ++T+ A++  +A+ LI RL  VL    +S  +   Q L  LIV GSGGHTAE++ L+  L
Sbjct:     4 VLTLAASAGGLAVLLIVRLWAVL----RSHPVTPRQSLGLLIVAGSGGHTAEILRLVGSL 59

Query:    68 QMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFM-QIYRSREVGQSYVTS 126
                 ++PR Y+ A +D MS +K    E +          +  ++ +I RSREV QS+++S
Sbjct:    60 S-GAYSPRHYVIAESDEMSAKKIHSLELARAQNDSTTEHTEYYLHRIPRSREVRQSWLSS 118

Query:   127 VXXXXXXXXXXXXXMVKIRPQVVM 150
             V             + +I+P +V+
Sbjct:   119 VFTTLYSIWFSFPLVHRIKPDLVL 142

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1914039 Alg14 "asparagine-linked glycosylation 14" [Mus musculus (taxid:10090)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 41/139 (29%), Positives = 69/139 (49%)

Query:    14 IIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFT 73
             I+A + A  +I L   L+       +   + L  LIV GSGGHT E++ L+  L  + ++
Sbjct:     6 ILAATAAGLVILLFQRLWTVLGPHHVTPRESLRLLIVAGSGGHTTEILRLVGSLS-NAYS 64

Query:    74 PRFYIAAATDNMSLQKARVFED--SLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVXXXX 131
             PR Y+ A +D MS +K    E+     +    +       +I RSREV QS+++SV    
Sbjct:    65 PRHYVIAESDEMSAKKIHSLEELSRAQNDSTTEYPKYHLHRIPRSREVRQSWLSSVFTTF 124

Query:   132 XXXXXXXXXMVKIRPQVVM 150
                      +++I+P +V+
Sbjct:   125 YSMWFSFPLVLRIKPDLVL 143

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

POMBASE|SPAC5D6.06c alg14 "UDP-GlcNAc transferase associated protein Alg14 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 41/117 (35%), Positives = 66/117 (56%)

Query:    10 YIMTIIATSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQM 69
             Y++T IA  +A  +I L+    +  KS + K P     L+  GSGGHT EM+NLL+ L  
Sbjct:     4 YVLTAIAV-LASLIILLVGRNAI--KSSK-KKPFQKHLLVFFGSGGHTGEMLNLLNALDD 59

Query:    70 DRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTS 126
               ++ R Y+A + D MS+ KA +  +SL   K      ++  ++ R+R V QS++T+
Sbjct:    60 KLYSVRSYVAGSDDTMSVSKASLLSNSLPSVK------SKIFKVPRARYVKQSWLTT 110

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=ISS

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISO

GO:0004577 "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity" evidence=ISO

ASPGD|ASPL0000027521 AN5736 [Emericella nidulans (taxid:162425)]

 Score = 135 (52.6 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 38/115 (33%), Positives = 65/115 (56%)

Query:    15 IATSVAIFLIRLLHVLYL-TGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQM--DR 71
             IA+ +++ L+  ++ ++  T   +      P+  L+VLGSGGHTAEM++LL  + +  ++
Sbjct:    43 IASVISLVLLLGVYTIFQNTPVPKWRPKSTPVHLLVVLGSGGHTAEMLSLLRRVDIITNK 102

Query:    72 FTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTS 126
                R Y+ ++ DN S  KA  FE SL  +      S   + + R+R V QSY+T+
Sbjct:   103 CIYRTYVVSSGDNFSATKALEFESSLGGQP----ESYAIITVPRARRVHQSYLTA 153

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

DICTYBASE|DDB_G0290339 ugt1 "putative glycosyltransferase" [Dictyostelium discoideum (taxid:44689)]

 Score = 137 (53.3 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 36/110 (32%), Positives = 54/110 (49%)

Query:    41 SPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHK 100
             S +   T++VLGSGGHT EM  LL  +  ++F P  Y+ A +D  S  K ++ ED+    
Sbjct:   219 SKKKFKTMVVLGSGGHTTEMFYLLKKVDKNKFNPITYVLADSDKRSEDKIKI-EDT---- 273

Query:   101 KVIKGSSAQFMQIYRSREVGQSYVTSVXXXXXXXXXXXXXMVKIRPQVVM 150
                  SS    +I RSR VGQS+  S+             + K +P  ++
Sbjct:   274 -----SSPIIKKIPRSRNVGQSFFNSIFTTLIALFYSMLLVFKEKPDCLL 318

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT4G18230	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Oligosaccharide biosynthesis protein Alg14 like (InterPro-IPR013969); Has 453 Blast hits to 453 proteins in 176 species- Archae - 4; Bacteria - 199; Metazoa - 76; Fungi - 83; Plants - 28; Viruses - 0; Other Eukaryotes - 63 (source- NCBI BLink). (233 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT4G16710	glycosyltransferase family protein 28; glycosyltransferase family protein 28; FUNCTIONS IN- tra [...] (176 aa)	•		•		•	•	•		0.963
	AT1G16570	glycosyl transferase family 1 protein; glycosyl transferase family 1 protein; FUNCTIONS IN- tra [...] (496 aa)						•	•		0.942
	AT3G57220	UDP-GlcNAc-dolichol phosphate N-acetylglucosamine-1-phosphate transferase, putative; UDP-GlcNAc [...] (426 aa)					•	•	•		0.931
	GPT	GPT (UDP-GLCNAC%3ADOLICHOL+PHOSPHATE+GLCNAC-1-P+TRANSFERASE); UDP-N-acetylglucosamine-dolichyl- [...] (431 aa)					•	•	•		0.931
	AT2G45910	protein kinase family protein / U-box domain-containing protein; protein kinase family protein [...] (834 aa)							•		0.788
	AT1G64150	unknown protein; unknown protein; LOCATED IN- chloroplast, membrane; EXPRESSED IN- 22 plant str [...] (370 aa)							•		0.599
	VIIIB	VIIIB; motor; member of Myosin-like proteins (1126 aa)							•		0.540
	DRNL	DRNL (DORNROSCHEN-LIKE); DNA binding / transcription factor; Encodes a member of the ERF (ethyl [...] (306 aa)							•		0.423
	RAT5	RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding; Isolated from T-DNA insertion [...] (130 aa)				•					0.422
	AT4G12040	zinc finger (AN1-like) family protein; zinc finger (AN1-like) family protein; FUNCTIONS IN- DNA [...] (175 aa)				•					0.414

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	168
pfam08660	166	pfam08660, Alg14, Oligosaccharide biosynthesis pro	2e-31

>gnl|CDD|219958 pfam08660, Alg14, Oligosaccharide biosynthesis protein Alg14 like

 Score =  110 bits (278), Expect = 2e-31
 Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 11/104 (10%)

Query: 47  TLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGS 106
             +VLGSGGHTAEM+ LL  L  +   PR Y+   TD  SL KA  FE S          
Sbjct: 1   ICVVLGSGGHTAEMLRLLPFL-KNLEDPRRYVVTETDKDSLSKASKFEKS---------- 49

Query: 107 SAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVM 150
               ++I R+REVGQSY+ S++TTL     AL L+ + RP V++
Sbjct: 50  RGGILKIPRAREVGQSYLRSIFTTLRNLLSALKLLRRERPDVIL 93

Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane. Length = 166

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	168
KOG3339	211	consensus Predicted glycosyltransferase [General f	100.0
PF08660	170	Alg14: Oligosaccharide biosynthesis protein Alg14	100.0
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	98.35
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	98.26
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	97.79
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	97.47
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	96.67
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	95.09
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	94.88
cd03808	359	GT1_cap1E_like This family is most closely related	94.54
PF13477	139	Glyco_trans_4_2: Glycosyl transferase 4-like	92.78
PLN03183	421	acetylglucosaminyltransferase family protein; Prov	91.77
cd03812	358	GT1_CapH_like This family is most closely related	91.27
cd04951	360	GT1_WbdM_like This family is most closely related	91.24
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	91.03
cd03806	419	GT1_ALG11_like This family is most closely related	91.01
cd03794	394	GT1_wbuB_like This family is most closely related	90.29
cd03819	355	GT1_WavL_like This family is most closely related	89.93
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	89.63
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	89.47
PF03033	139	Glyco_transf_28: Glycosyltransferase family 28 N-t	89.05
PLN02949	463	transferase, transferring glycosyl groups	88.69
cd03807	365	GT1_WbnK_like This family is most closely related	87.37
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	87.04
TIGR03492	396	conserved hypothetical protein. This protein famil	86.51
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	84.78
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	84.11
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	81.6

>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]

Probab=100.00  E-value=2.7e-48  Score=312.70  Aligned_cols=140  Identities=43%  Similarity=0.577  Sum_probs=120.2

Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCCCCCcEEEEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHh
Q 030992           17 TSVAIFLIRLLHVLYLTGKSRRLKSPQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDS   96 (168)
Q Consensus        17 ~~~~~l~~Rl~~vl~~~~~~~~~~~~~~~kilvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~   96 (168)
                      .++.++.+|+.++..+..++.  +++++.+++|||||||||+||++|+++++ +.|+||+|+.+++|++|++|++.||.+
T Consensus        13 ~~~~li~~~v~~~~~~~~k~~--Pk~~s~~~lVvlGSGGHT~EMlrLl~~l~-~~y~~r~yI~a~tD~mS~~k~~~F~~~   89 (211)
T KOG3339|consen   13 YVIVLIALLVFRHTQRSTKKD--PKDKSLSTLVVLGSGGHTGEMLRLLEALQ-DLYSPRSYIAADTDEMSEQKARSFELS   89 (211)
T ss_pred             HHHHHHHHHHHHHHHhccCCC--CcCCcceEEEEEcCCCcHHHHHHHHHHHH-hhcCceEEEEecCchhhHHHHHhhhcc
Confidence            444555666656554443333  33578999999999999999999999996 889999999999999999999999987


Q ss_pred             hhhhhhccCCceEEEEeccccccCcchhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhheeeeec
Q 030992           97 LLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVIL  165 (168)
Q Consensus        97 ~~~~~~~~~~~~~~~~ipRaReV~Qs~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~~~~~  165 (168)
                      ...      .+..++.+||+|||||||+||+||+++++++|+++++|.|||+|+|||||+++|+|+.|.
T Consensus        90 ~a~------~~a~~~~ipRsReVgQS~ltSv~Tti~all~s~~lv~RirPdlil~NGPGTCv~i~~~a~  152 (211)
T KOG3339|consen   90 LAH------CKAKNYEIPRSREVGQSWLTSVFTTIWALLQSFVLVWRIRPDLILCNGPGTCVPICLSAY  152 (211)
T ss_pred             ccc------cchhheecchhhhhhhhhhhhHHHHHHHHHHHheEEEecCCCEEEECCCCcEeHHHHHHH
Confidence            643      235567799999999999999999999999999999999999999999999999999874

>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane []

Probab=100.00  E-value=7.5e-37  Score=243.82  Aligned_cols=112  Identities=42%  Similarity=0.609  Sum_probs=104.9

Q ss_pred             EEEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcchhHH
Q 030992           47 TLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTS  126 (168)
Q Consensus        47 ilvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~~tS  126 (168)
                      +|+|+||||||+||++|++.++.+.+++++|+++++|..|.+|++++|++...       ..+++.+||+|+|+|||+++
T Consensus         1 Il~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~~~~~-------~~~~~~~~r~r~v~q~~~~~   73 (170)
T PF08660_consen    1 ILVVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEKSSSK-------RHKILEIPRAREVGQSYLTS   73 (170)
T ss_pred             CEEEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHHhccc-------cceeeccceEEEechhhHhh
Confidence            58999999999999999999988899999999999999999999999987532       23789999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhheeeeec
Q 030992          127 VWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVIL  165 (168)
Q Consensus       127 i~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~~~~~  165 (168)
                      ++++++++++|+.+++|+|||+|||||||+|+|+|+++.
T Consensus        74 ~~~~l~~~~~~~~il~r~rPdvii~nGpg~~vp~~~~~~  112 (170)
T PF08660_consen   74 IFTTLRAFLQSLRILRRERPDVIISNGPGTCVPVCLAAK  112 (170)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEcCCceeeHHHHHHH
Confidence            999999999999999999999999999999999999874

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=98.35  E-value=1.5e-06  Score=76.75  Aligned_cols=107  Identities=16%  Similarity=0.173  Sum_probs=78.6

Q ss_pred             EEEEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcc---
Q 030992           46 STLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQS---  122 (168)
Q Consensus        46 kilvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs---  122 (168)
                      -++..-|+|||..==+.+.+.+..+-+. ...+.+.+|.++.        .....     ....++.|+-.+--+++   
T Consensus         3 ivl~~gGTGGHv~pAlAl~~~l~~~g~~-~v~~~~~~~~~e~--------~l~~~-----~~~~~~~I~~~~~~~~~~~~   68 (357)
T COG0707           3 IVLTAGGTGGHVFPALALAEELAKRGWE-QVIVLGTGDGLEA--------FLVKQ-----YGIEFELIPSGGLRRKGSLK   68 (357)
T ss_pred             EEEEeCCCccchhHHHHHHHHHHhhCcc-EEEEeccccccee--------eeccc-----cCceEEEEecccccccCcHH
Confidence            4567789999999999999999966666 4555567777733        22111     12344444433333333   


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhheeeeecc
Q 030992          123 YVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVILQ  166 (168)
Q Consensus       123 ~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~~~~~~  166 (168)
                      .+.++|..+++...+..++.+.|||+|+++|.-+++|..++|..
T Consensus        69 ~~~~~~~~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~  112 (357)
T COG0707          69 LLKAPFKLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKL  112 (357)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHh
Confidence            35677889999999999999999999999999999999998864

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=98.26  E-value=2.3e-06  Score=74.74  Aligned_cols=102  Identities=13%  Similarity=0.162  Sum_probs=72.5

Q ss_pred             EEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccc---cccCcchhHH
Q 030992           50 VLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRS---REVGQSYVTS  126 (168)
Q Consensus        50 vLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRa---ReV~Qs~~tS  126 (168)
                      --|+|||..=-+.+.+.+..+  .+..+++++.+..+        .++..+     ..+.+..++..   |...-..+.+
T Consensus         8 ~GGTGGHi~Pala~a~~l~~~--g~~v~~vg~~~~~e--------~~l~~~-----~g~~~~~~~~~~l~~~~~~~~~~~   72 (352)
T PRK12446          8 GGGSAGHVTPNLAIIPYLKED--NWDISYIGSHQGIE--------KTIIEK-----ENIPYYSISSGKLRRYFDLKNIKD   72 (352)
T ss_pred             cCCcHHHHHHHHHHHHHHHhC--CCEEEEEECCCccc--------cccCcc-----cCCcEEEEeccCcCCCchHHHHHH
Confidence            347999999999999999843  34566666665552        222111     12445555421   2111123678


Q ss_pred             HHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhheeeeecc
Q 030992          127 VWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVILQ  166 (168)
Q Consensus       127 i~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~~~~~~  166 (168)
                      ++..+++++++..++.++|||+|+++|.-+++|++++|..
T Consensus        73 ~~~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~  112 (352)
T PRK12446         73 PFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWL  112 (352)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHH
Confidence            8889999999999999999999999999999999998753

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=97.79  E-value=0.00012  Score=62.52  Aligned_cols=103  Identities=16%  Similarity=0.193  Sum_probs=63.6

Q ss_pred             cEEEEEE-cCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcch
Q 030992           45 LSTLIVL-GSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSY  123 (168)
Q Consensus        45 ~kilvvL-GSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~  123 (168)
                      +|++++. |+|||...++.|.+.+....++  ..+++..+....+   ..++          ..+.++.++-.+..+.+-
T Consensus         2 ~~i~i~~~g~gG~~~~~~~la~~L~~~g~e--v~vv~~~~~~~~~---~~~~----------~g~~~~~~~~~~~~~~~~   66 (357)
T PRK00726          2 KKILLAGGGTGGHVFPALALAEELKKRGWE--VLYLGTARGMEAR---LVPK----------AGIEFHFIPSGGLRRKGS   66 (357)
T ss_pred             cEEEEEcCcchHhhhHHHHHHHHHHhCCCE--EEEEECCCchhhh---cccc----------CCCcEEEEeccCcCCCCh
Confidence            4777774 7999999999999988855454  4555555432111   1111          124455555444333332


Q ss_pred             ---hHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhheee
Q 030992          124 ---VTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSL  162 (168)
Q Consensus       124 ---~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~~  162 (168)
                         +-..++.++++.....++.+++||+|+|.|...+++.++
T Consensus        67 ~~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~  108 (357)
T PRK00726         67 LANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGL  108 (357)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHH
Confidence               223455566666666777788999999999776766444

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=97.47  E-value=0.00053  Score=57.72  Aligned_cols=98  Identities=15%  Similarity=0.143  Sum_probs=60.1

Q ss_pred             EEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccc---cccCcchhH
Q 030992           49 IVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRS---REVGQSYVT  125 (168)
Q Consensus        49 vvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRa---ReV~Qs~~t  125 (168)
                      .-.|+|||+.....+.+.|..+-++  .++++.++....   ...+.          .++.++.+|-.   ++-.-.++.
T Consensus         5 ~~~~~gG~~~~~~~la~~l~~~G~e--v~v~~~~~~~~~---~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~   69 (350)
T cd03785           5 AGGGTGGHIFPALALAEELRERGAE--VLFLGTKRGLEA---RLVPK----------AGIPLHTIPVGGLRRKGSLKKLK   69 (350)
T ss_pred             EecCchhhhhHHHHHHHHHHhCCCE--EEEEECCCcchh---hcccc----------cCCceEEEEecCcCCCChHHHHH
Confidence            4568999999999999999865554  345554443321   11111          12334444422   222223445


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhhee
Q 030992          126 SVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSS  161 (168)
Q Consensus       126 Si~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~  161 (168)
                      +++..++.+.....++.+++||+|+++|+..+++..
T Consensus        70 ~~~~~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~  105 (350)
T cd03785          70 APFKLLKGVLQARKILKKFKPDVVVGFGGYVSGPVG  105 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEECCCCcchHHH
Confidence            566667777777788889999999999976665543

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=96.67  E-value=0.0093  Score=50.12  Aligned_cols=99  Identities=14%  Similarity=0.105  Sum_probs=55.9

Q ss_pred             EEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcch---h
Q 030992           48 LIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSY---V  124 (168)
Q Consensus        48 lvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~---~  124 (168)
                      ++..|.|||..--..|.+.+....++ . .+++..+....    .+.++         ....+..+|..+..+-+.   +
T Consensus         5 ~~~g~~~g~~~~~~~La~~L~~~g~e-V-~vv~~~~~~~~----~~~~~---------~g~~~~~i~~~~~~~~~~~~~l   69 (348)
T TIGR01133         5 LAAGGTGGHIFPALAVAEELIKRGVE-V-LWLGTKRGLEK----RLVPK---------AGIEFYFIPVGGLRRKGSFRLI   69 (348)
T ss_pred             EEeCccHHHHhHHHHHHHHHHhCCCE-E-EEEeCCCcchh----ccccc---------CCCceEEEeccCcCCCChHHHH
Confidence            56778999998666788888855544 3 34443222111    11010         124455555544222221   2


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhhee
Q 030992          125 TSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSS  161 (168)
Q Consensus       125 tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~  161 (168)
                      ..+++.+..+.....++.+++||+|+++++..+++..
T Consensus        70 ~~~~~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~  106 (348)
T TIGR01133        70 KTPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAG  106 (348)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHH
Confidence            2234455555556667788999999999876655543

RL J Bacteriol 1993 Mar;175(6):1841-3

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=95.09  E-value=0.16  Score=43.19  Aligned_cols=97  Identities=15%  Similarity=0.137  Sum_probs=49.9

Q ss_pred             EEEEcCc-hhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcchhHH
Q 030992           48 LIVLGSG-GHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTS  126 (168)
Q Consensus        48 lvvLGSG-GHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~~tS  126 (168)
                      ..+.|.| ||..--+.+.+.+.. .++ ..|+ ++++  .. +..  ++.....- .......+ ..++. ++  ..+.+
T Consensus         4 ~~~~g~G~GH~~r~~ala~~L~~-g~e-v~~~-~~~~--~~-~~~--~~~~~~~~-~~~p~~~~-~~~~~-~~--~~~~~   70 (321)
T TIGR00661         4 YSVCGEGFGHTTRSVAIGEALKN-DYE-VSYI-ASGR--SK-NYI--SKYGFKVF-ETFPGIKL-KGEDG-KV--NIVKT   70 (321)
T ss_pred             EEEeccCccHHHHHHHHHHHHhC-CCe-EEEE-EcCC--HH-Hhh--hhhcCcce-eccCCceE-eecCC-cC--cHHHH
Confidence            4589999 999999999999884 444 4444 4444  22 111  11100000 00000011 11222 11  22222


Q ss_pred             HH---HH-HHHHHHHHHHHhhcCCcEEEeCCCcch
Q 030992          127 VW---TT-LLATTHALWLMVKIRPQVVMNLSLARV  157 (168)
Q Consensus       127 i~---tt-l~s~~~sl~il~r~rPdviL~~G~~~~  157 (168)
                      .+   .+ ...+.....++.+.+||+|++.|.=.+
T Consensus        71 l~~~~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~~  105 (321)
T TIGR00661        71 LRNKEYSPKKAIRREINIIREYNPDLIISDFEYST  105 (321)
T ss_pred             HHhhccccHHHHHHHHHHHHhcCCCEEEECCchHH
Confidence            22   11 124445667888999999999987644

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=94.88  E-value=0.027  Score=49.72  Aligned_cols=95  Identities=14%  Similarity=0.122  Sum_probs=57.8

Q ss_pred             EEEE-EEcCchhHHHHHHhHHhcccCCCCceEEEEeCC-chhhHHHHHHHHHhhhhhhhccCCceEEEEec--cccccCc
Q 030992           46 STLI-VLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAAT-DNMSLQKARVFEDSLLHKKVIKGSSAQFMQIY--RSREVGQ  121 (168)
Q Consensus        46 kilv-vLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~t-D~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ip--RaReV~Q  121 (168)
                      |+++ --|.|||..== .+.+.+...  .+...+++.+ +.+        |+....      ..+.+..++  -=+|+  
T Consensus         7 ki~i~aGgtsGhi~pa-al~~~l~~~--~~~~~~~g~gg~~m--------~~~g~~------~~~~~~~l~v~G~~~~--   67 (385)
T TIGR00215         7 TIALVAGEASGDILGA-GLRQQLKEH--YPNARFIGVAGPRM--------AAEGCE------VLYSMEELSVMGLREV--   67 (385)
T ss_pred             eEEEEeCCccHHHHHH-HHHHHHHhc--CCCcEEEEEccHHH--------HhCcCc------cccChHHhhhccHHHH--
Confidence            5655 44699998866 777777733  2334444444 333        221100      001111111  11122  


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhheee
Q 030992          122 SYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSL  162 (168)
Q Consensus       122 s~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~~  162 (168)
                        +..++..++.+..+..++.++|||+|+++| +.++|+.+
T Consensus        68 --l~~~~~~~~~~~~~~~~l~~~kPd~vi~~g-~~~~~~~~  105 (385)
T TIGR00215        68 --LGRLGRLLKIRKEVVQLAKQAKPDLLVGID-APDFNLTK  105 (385)
T ss_pred             --HHHHHHHHHHHHHHHHHHHhcCCCEEEEeC-CCCccHHH
Confidence              556777778888888999999999999999 79999766

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=94.54  E-value=0.17  Score=40.65  Aligned_cols=91  Identities=20%  Similarity=0.265  Sum_probs=53.2

Q ss_pred             EEEEEEcC-chhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcchh
Q 030992           46 STLIVLGS-GGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYV  124 (168)
Q Consensus        46 kilvvLGS-GGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~~  124 (168)
                      |++++..+ ||+..-+.++.+.+....++ .+++....+...     ..+.          .+..+..+|..+. .    
T Consensus         1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~-v~~~~~~~~~~~-----~~~~----------~~~~~~~~~~~~~-~----   59 (359)
T cd03808           1 KILHIVTVDGGLYSFRLPLIKALRAAGYE-VHVVAPPGDELE-----ELEA----------LGVKVIPIPLDRR-G----   59 (359)
T ss_pred             CeeEEEecchhHHHHHHHHHHHHHhcCCe-eEEEecCCCccc-----cccc----------CCceEEecccccc-c----
Confidence            46666666 89999999999999645454 334443333221     1111          2345566666553 1    


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcch
Q 030992          125 TSVWTTLLATTHALWLMVKIRPQVVMNLSLARV  157 (168)
Q Consensus       125 tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~  157 (168)
                      .+.+..+..+..-..++.+.+||+|++.+....
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~dvv~~~~~~~~   92 (359)
T cd03808          60 INPFKDLKALLRLYRLLRKERPDIVHTHTPKPG   92 (359)
T ss_pred             cChHhHHHHHHHHHHHHHhcCCCEEEEccccch
Confidence            122344444445556667889999999876443

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like

Probab=92.78  E-value=1.1  Score=32.73  Aligned_cols=83  Identities=13%  Similarity=0.152  Sum_probs=45.9

Q ss_pred             EEEEEc-CchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcchhH
Q 030992           47 TLIVLG-SGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVT  125 (168)
Q Consensus        47 ilvvLG-SGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~~t  125 (168)
                      ++++.. ..+|   ++++.+.+....|+ .+++....|..      +.+..         .+..++.++..|+-      
T Consensus         2 Il~i~~~~~~~---~~~~~~~L~~~g~~-V~ii~~~~~~~------~~~~~---------~~i~~~~~~~~~k~------   56 (139)
T PF13477_consen    2 ILLIGNTPSTF---IYNLAKELKKRGYD-VHIITPRNDYE------KYEII---------EGIKVIRLPSPRKS------   56 (139)
T ss_pred             EEEEecCcHHH---HHHHHHHHHHCCCE-EEEEEcCCCch------hhhHh---------CCeEEEEecCCCCc------
Confidence            444444 3334   55667777755555 44444433331      11111         24667777644431      


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCcEEEeCCCcc
Q 030992          126 SVWTTLLATTHALWLMVKIRPQVVMNLSLAR  156 (168)
Q Consensus       126 Si~ttl~s~~~sl~il~r~rPdviL~~G~~~  156 (168)
                       ++..+. ...-..++.+++||+|.|.++..
T Consensus        57 -~~~~~~-~~~l~k~ik~~~~DvIh~h~~~~   85 (139)
T PF13477_consen   57 -PLNYIK-YFRLRKIIKKEKPDVIHCHTPSP   85 (139)
T ss_pred             -cHHHHH-HHHHHHHhccCCCCEEEEecCCh
Confidence             234443 33445677889999999999876

>PLN03183 acetylglucosaminyltransferase family protein; Provisional

Probab=91.77  E-value=3.5  Score=37.64  Aligned_cols=96  Identities=15%  Similarity=0.135  Sum_probs=52.3

Q ss_pred             CCcEE-EEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCc
Q 030992           43 QPLST-LIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQ  121 (168)
Q Consensus        43 ~~~ki-lvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Q  121 (168)
                      +|.|+ ..++|++|...++.|||+.+...+  ...|+.-+.++...+++... ...+... ......+++.+.|+..|.-
T Consensus        76 ~~~r~AYLI~~h~~d~~~l~RLL~aLYhpr--N~y~IHlDkKS~~~er~~l~-~~v~~~~-~~~~~~NV~vl~k~~~V~W  151 (421)
T PLN03183         76 KLPRFAYLVSGSKGDLEKLWRTLRALYHPR--NQYVVHLDLESPAEERLELA-SRVENDP-MFSKVGNVYMITKANLVTY  151 (421)
T ss_pred             CCCeEEEEEEecCCcHHHHHHHHHHhcCCC--ceEEEEecCCCChHHHHHHH-HHhhccc-hhhccCcEEEEecceeecc
Confidence            45666 578889999999999999986332  13455544433333232211 1110000 0001123444455554422


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhcCC
Q 030992          122 SYVTSVWTTLLATTHALWLMVKIRP  146 (168)
Q Consensus       122 s~~tSi~ttl~s~~~sl~il~r~rP  146 (168)
                      .    =+|.+.+.++|+..+++..+
T Consensus       152 G----G~S~V~AtL~~m~~LL~~~~  172 (421)
T PLN03183        152 R----GPTMVANTLHACAILLKRSK  172 (421)
T ss_pred             C----ChHHHHHHHHHHHHHHhhCC
Confidence            2    25888889999988887654

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=91.27  E-value=1.5  Score=36.33  Aligned_cols=90  Identities=13%  Similarity=0.128  Sum_probs=48.5

Q ss_pred             EEEEE---cCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcch
Q 030992           47 TLIVL---GSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSY  123 (168)
Q Consensus        47 ilvvL---GSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~  123 (168)
                      ++++.   +.||...-+.++.+.+..+.|+ .+++....+....  ....+.          .+..++.++....   . 
T Consensus         2 Il~~~~~~~~GG~~~~~~~l~~~L~~~~~~-v~~i~~~~~~~~~--~~~~~~----------~~~~~~~~~~~~~---~-   64 (358)
T cd03812           2 ILHIVGTMNRGGIETFIMNYYRNLDRSKIQ-FDFLVTSKEEGDY--DDEIEK----------LGGKIYYIPARKK---N-   64 (358)
T ss_pred             EEEEeCCCCCccHHHHHHHHHHhcCccceE-EEEEEeCCCCcch--HHHHHH----------cCCeEEEecCCCc---c-
Confidence            44444   4599999999999999855665 5555544333211  111111          1233444443222   1 


Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhh
Q 030992          124 VTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFF  159 (168)
Q Consensus       124 ~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p  159 (168)
                         .+..+..+.   .++.+.+||+|.++++.....
T Consensus        65 ---~~~~~~~~~---~~~~~~~~Dvv~~~~~~~~~~   94 (358)
T cd03812          65 ---PLKYFKKLY---KLIKKNKYDIVHVHGSSASGF   94 (358)
T ss_pred             ---HHHHHHHHH---HHHhcCCCCEEEEeCcchhHH
Confidence               122222222   255678999999998864333

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=91.24  E-value=0.71  Score=38.07  Aligned_cols=88  Identities=16%  Similarity=0.181  Sum_probs=48.0

Q ss_pred             EEEEE---cCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcch
Q 030992           47 TLIVL---GSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSY  123 (168)
Q Consensus        47 ilvvL---GSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~  123 (168)
                      ++++.   |.|||-.-...+.+.|....++ .+++...++....     ....          ......++..+.     
T Consensus         2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~-v~v~~~~~~~~~~-----~~~~----------~~~~~~~~~~~~-----   60 (360)
T cd04951           2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQ-VAIISLTGESEVK-----PPID----------ATIILNLNMSKN-----   60 (360)
T ss_pred             eEEEecCCCCCCHHHHHHHHHHhcccCCce-EEEEEEeCCCCcc-----chhh----------ccceEEeccccc-----
Confidence            45554   4599999999999999854444 3344333332211     0000          011123333222     


Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchh
Q 030992          124 VTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVF  158 (168)
Q Consensus       124 ~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~  158 (168)
                         .+..++++.....++.+.+||+|.++++....
T Consensus        61 ---~~~~~~~~~~~~~~~~~~~pdiv~~~~~~~~~   92 (360)
T cd04951          61 ---PLSFLLALWKLRKILRQFKPDVVHAHMFHANI   92 (360)
T ss_pred             ---chhhHHHHHHHHHHHHhcCCCEEEEcccchHH
Confidence               12334444445566778899999999876543

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=91.03  E-value=1.2  Score=37.87  Aligned_cols=87  Identities=18%  Similarity=0.332  Sum_probs=49.0

Q ss_pred             EEEEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcchhH
Q 030992           46 STLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVT  125 (168)
Q Consensus        46 kilvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~~t  125 (168)
                      ++.--++.||...-++.|.+.++.+.|..  .+++-+|....      +++...      .+..++.+++...  ..   
T Consensus         6 ~ii~~~~~GG~e~~~~~l~~~l~~~~~~~--~v~~~~~~~~~------~~~~~~------~~i~~~~~~~~~~--~~---   66 (374)
T TIGR03088         6 HVVYRFDVGGLENGLVNLINHLPADRYRH--AVVALTEVSAF------RKRIQR------PDVAFYALHKQPG--KD---   66 (374)
T ss_pred             EEeCCCCCCcHHHHHHHHHhhccccccce--EEEEcCCCChh------HHHHHh------cCceEEEeCCCCC--CC---
Confidence            34444567999999999999998666652  33333332211      111111      2355666665322  11   


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCcEEEeCCCcc
Q 030992          126 SVWTTLLATTHALWLMVKIRPQVVMNLSLAR  156 (168)
Q Consensus       126 Si~ttl~s~~~sl~il~r~rPdviL~~G~~~  156 (168)
                        +   ..+..-..++.+++||+|-+.++..
T Consensus        67 --~---~~~~~l~~~l~~~~~Divh~~~~~~   92 (374)
T TIGR03088        67 --V---AVYPQLYRLLRQLRPDIVHTRNLAA   92 (374)
T ss_pred             --h---HHHHHHHHHHHHhCCCEEEEcchhH
Confidence              1   1222333556788999999998654

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=91.01  E-value=1.2  Score=39.52  Aligned_cols=39  Identities=13%  Similarity=0.114  Sum_probs=30.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCCcEEEeC-CCcchhhee
Q 030992          123 YVTSVWTTLLATTHALWLMVKIRPQVVMNL-SLARVFFSS  161 (168)
Q Consensus       123 ~~tSi~ttl~s~~~sl~il~r~rPdviL~~-G~~~~~p~~  161 (168)
                      .++...+.+.+++.++..+++.+|||++++ |.+.++|+.
T Consensus        85 r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~  124 (419)
T cd03806          85 RFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLV  124 (419)
T ss_pred             ceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHH
Confidence            456778888888888888888899999988 577777764

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=90.29  E-value=0.95  Score=36.69  Aligned_cols=93  Identities=14%  Similarity=0.126  Sum_probs=52.0

Q ss_pred             chhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcchhHHHHHHHHH
Q 030992           54 GGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTSVWTTLLA  133 (168)
Q Consensus        54 GGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~~tSi~ttl~s  133 (168)
                      |||..-+..+.+.|....++ .+++....+..........+.+       ......++.++....-..+++..++....-
T Consensus        14 ~G~~~~~~~l~~~L~~~g~~-v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (394)
T cd03794          14 GGGAFRTTELAEELVKRGHE-VTVITGSPNYPSGKIYKGYKRE-------EVDGVRVHRVPLPPYKKNGLLKRLLNYLSF   85 (394)
T ss_pred             CCcceeHHHHHHHHHhCCce-EEEEecCCCcccccccccceEE-------ecCCeEEEEEecCCCCccchHHHHHhhhHH
Confidence            78888899998888854444 4444433322211000000000       012456667776666666665555555444


Q ss_pred             HHHHHHHHh--hcCCcEEEeCCC
Q 030992          134 TTHALWLMV--KIRPQVVMNLSL  154 (168)
Q Consensus       134 ~~~sl~il~--r~rPdviL~~G~  154 (168)
                      .......+.  ..+||+|+++++
T Consensus        86 ~~~~~~~~~~~~~~~D~v~~~~~  108 (394)
T cd03794          86 ALSALLALLKRRRRPDVIIATSP  108 (394)
T ss_pred             HHHHHHHHHhcccCCCEEEEcCC
Confidence            445555554  778999999983

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=89.93  E-value=1.4  Score=36.35  Aligned_cols=91  Identities=19%  Similarity=0.188  Sum_probs=51.6

Q ss_pred             EEEEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcchhH
Q 030992           46 STLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVT  125 (168)
Q Consensus        46 kilvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~~t  125 (168)
                      +++--+++||--.-..+|.+.+...-+  ..+++.......    ...+..          ...++.++....       
T Consensus         2 ~~~~~~~~gG~e~~~~~l~~~L~~~g~--~v~v~~~~~~~~----~~~~~~----------~~~~~~~~~~~~-------   58 (355)
T cd03819           2 QVLPALESGGVERGTLELARALVERGH--RSLVASAGGRLV----AELEAE----------GSRHIKLPFISK-------   58 (355)
T ss_pred             ccchhhccCcHHHHHHHHHHHHHHcCC--EEEEEcCCCchH----HHHHhc----------CCeEEEcccccc-------
Confidence            445557789999999999888885544  344444332221    111211          233444443221       


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhh
Q 030992          126 SVWTTLLATTHALWLMVKIRPQVVMNLSLARVFF  159 (168)
Q Consensus       126 Si~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p  159 (168)
                      .++..++.+..-...+.+.+||+|+++++..+.+
T Consensus        59 ~~~~~~~~~~~l~~~~~~~~~dii~~~~~~~~~~   92 (355)
T cd03819          59 NPLRILLNVARLRRLIREEKVDIVHARSRAPAWS   92 (355)
T ss_pred             chhhhHHHHHHHHHHHHHcCCCEEEECCCchhHH
Confidence            1233344444455667789999999998755443

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=89.63  E-value=1.8  Score=37.98  Aligned_cols=107  Identities=11%  Similarity=0.133  Sum_probs=60.8

Q ss_pred             cEEEEEEcCchhHHHHHHhHHhcccC-CCCceEEEEeCC-c-hh--hHHHHHHHHHh-hhhhhhccCCceEEEEeccccc
Q 030992           45 LSTLIVLGSGGHTAEMMNLLSVLQMD-RFTPRFYIAAAT-D-NM--SLQKARVFEDS-LLHKKVIKGSSAQFMQIYRSRE  118 (168)
Q Consensus        45 ~kilvvLGSGGHT~EMl~LL~~l~~~-~y~~rtyvv~~t-D-~~--S~~k~~~~e~~-~~~~~~~~~~~~~~~~ipRaRe  118 (168)
                      +|+|+|.|+=--..=|-.+++.++.+ .+++...+++.- | .+  +.   .+.++. +.-.     ....+ .+...  
T Consensus         1 ~ki~~v~GtRpe~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~---~~~~~~~~~~~-----~~~~~-~~~~~--   69 (365)
T TIGR03568         1 KKICVVTGTRADYGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTV---NEIEKDGFDID-----EKIEI-LLDSD--   69 (365)
T ss_pred             CeEEEEEecChhHHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHH---HHHHHcCCCCC-----Ccccc-ccCCC--
Confidence            38999999999888899999999854 355444444422 1 11  12   122221 1000     01111 11110  


Q ss_pred             cCcchhHHHHHHHHHHHHHHHHHhhcCCcEEEeCC-Ccchhheeeeec
Q 030992          119 VGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLS-LARVFFSSLVIL  165 (168)
Q Consensus       119 V~Qs~~tSi~ttl~s~~~sl~il~r~rPdviL~~G-~~~~~p~~~~~~  165 (168)
                      -+||.   .-.+...+...-.++.+++||+||+-| ..++++.+++|.
T Consensus        70 ~~~~~---~~~~~~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~  114 (365)
T TIGR03568        70 SNAGM---AKSMGLTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAA  114 (365)
T ss_pred             CCCCH---HHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHH
Confidence            12222   224444555666788999999999999 777777777664

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=89.47  E-value=2.6  Score=36.11  Aligned_cols=94  Identities=20%  Similarity=0.214  Sum_probs=54.1

Q ss_pred             cEEEEEEcCchhHHHHHHhHHhcccC-CCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcch
Q 030992           45 LSTLIVLGSGGHTAEMMNLLSVLQMD-RFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSY  123 (168)
Q Consensus        45 ~kilvvLGSGGHT~EMl~LL~~l~~~-~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~  123 (168)
                      +|++++.|+=-|..=|-.+++.++.+ .++....+++.-..+    ..++++...-.     .++.+ .+. . . +++.
T Consensus         1 ~~i~~~~gtr~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~----~~~~~~~~~i~-----~~~~~-~~~-~-~-~~~~   67 (365)
T TIGR00236         1 LKVSIVLGTRPEAIKMAPLIRALKKYPEIDSYVIVTAQHREM----LDQVLDLFHLP-----PDYDL-NIM-S-P-GQTL   67 (365)
T ss_pred             CeEEEEEecCHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHHH----HHHHHHhcCCC-----CCeee-ecC-C-C-CCCH
Confidence            48999999999999999999999854 445454444443322    23333322100     01111 121 1 1 3443


Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC
Q 030992          124 VTSVWTTLLATTHALWLMVKIRPQVVMNLSL  154 (168)
Q Consensus       124 ~tSi~ttl~s~~~sl~il~r~rPdviL~~G~  154 (168)
                      -.+...++   ..--.++.+++||+|++-|.
T Consensus        68 ~~~~~~~~---~~l~~~l~~~~pDiv~~~gd   95 (365)
T TIGR00236        68 GEITSNML---EGLEELLLEEKPDIVLVQGD   95 (365)
T ss_pred             HHHHHHHH---HHHHHHHHHcCCCEEEEeCC
Confidence            33333333   33335678899999999995

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=89.05  E-value=1.4  Score=32.27  Aligned_cols=99  Identities=14%  Similarity=0.172  Sum_probs=60.2

Q ss_pred             EEEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccC-----c
Q 030992           47 TLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVG-----Q  121 (168)
Q Consensus        47 ilvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~-----Q  121 (168)
                      +++-.||+||..=++.|-+.|...-.  ..-+....|....  +   |+          ....+..++...+..     .
T Consensus         2 li~~~Gt~Ghv~P~lala~~L~~rGh--~V~~~~~~~~~~~--v---~~----------~Gl~~~~~~~~~~~~~~~~~~   64 (139)
T PF03033_consen    2 LIATGGTRGHVYPFLALARALRRRGH--EVRLATPPDFRER--V---EA----------AGLEFVPIPGDSRLPRSLEPL   64 (139)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHHTT---EEEEEETGGGHHH--H---HH----------TT-EEEESSSCGGGGHHHHHH
T ss_pred             EEEEcCChhHHHHHHHHHHHHhccCC--eEEEeecccceec--c---cc----------cCceEEEecCCcCcCcccchh
Confidence            45778999999999999999985433  3334444443311  1   22          235676666552221     2


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhheee
Q 030992          122 SYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSL  162 (168)
Q Consensus       122 s~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~~  162 (168)
                      ..+..+......+......+.+.+||++...|...+.++.+
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  105 (139)
T PF03033_consen   65 ANLRRLARLIRGLEEAMRILARFRPDLVVAAGGYVADDVII  105 (139)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEEC
T ss_pred             hhhhhHHHHhhhhhHHHHHhhccCcchhhhccCcccchHHH
Confidence            23334444455566677788888899988877655555544

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....

>PLN02949 transferase, transferring glycosyl groups

Probab=88.69  E-value=11  Score=34.34  Aligned_cols=114  Identities=11%  Similarity=0.034  Sum_probs=59.2

Q ss_pred             CcEEEEE---EcCc-hhHHHHHHhHHhcccCCCC-ceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccc
Q 030992           44 PLSTLIV---LGSG-GHTAEMMNLLSVLQMDRFT-PRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSRE  118 (168)
Q Consensus        44 ~~kilvv---LGSG-GHT~EMl~LL~~l~~~~y~-~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaRe  118 (168)
                      +.++.++   ||.| |=--=+......+.....+ ..+.++++.|....+-...-.+...-+   -.....++.+.|..-
T Consensus        33 ~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~---~~~~~~~v~l~~~~~  109 (463)
T PLN02949         33 KRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVE---LLSPPKVVHLRKRKW  109 (463)
T ss_pred             CcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhccee---cCCCceEEEeccccc
Confidence            4577666   7788 5444455555555532221 234445555654322111011111000   001123443322222


Q ss_pred             cCc---chhHHHHHHHHHHHHHHHHHhhcCCcEEE-eCCCcchhhe
Q 030992          119 VGQ---SYVTSVWTTLLATTHALWLMVKIRPQVVM-NLSLARVFFS  160 (168)
Q Consensus       119 V~Q---s~~tSi~ttl~s~~~sl~il~r~rPdviL-~~G~~~~~p~  160 (168)
                      +--   +.+|-+...+.+++.++..+++..||+.+ ++|.+.++|+
T Consensus       110 ~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl  155 (463)
T PLN02949        110 IEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPL  155 (463)
T ss_pred             cccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHH
Confidence            221   23677788888888888888888898777 5676777776

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=87.37  E-value=4.8  Score=32.32  Aligned_cols=89  Identities=21%  Similarity=0.244  Sum_probs=48.1

Q ss_pred             EEEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcchhHH
Q 030992           47 TLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQSYVTS  126 (168)
Q Consensus        47 ilvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~~tS  126 (168)
                      +.--+++||+-.-+..|.+.+....+.. . ++..++....      .+....      .+..+..++....        
T Consensus         5 i~~~~~~gG~~~~~~~l~~~l~~~~~~v-~-~~~~~~~~~~------~~~~~~------~~i~v~~~~~~~~--------   62 (365)
T cd03807           5 VITGLDVGGAERMLVRLLKGLDRDRFEH-V-VISLTDRGEL------GEELEE------AGVPVYCLGKRPG--------   62 (365)
T ss_pred             EEeeccCccHHHHHHHHHHHhhhccceE-E-EEecCcchhh------hHHHHh------cCCeEEEEecccc--------
Confidence            4445678999999999999996555542 2 2322222211      111111      1234444443322        


Q ss_pred             HHHHHHHHHHHHHHHhhcCCcEEEeCCCcchh
Q 030992          127 VWTTLLATTHALWLMVKIRPQVVMNLSLARVF  158 (168)
Q Consensus       127 i~ttl~s~~~sl~il~r~rPdviL~~G~~~~~  158 (168)
                       ....+.+..-..++.+.+||+|.+......+
T Consensus        63 -~~~~~~~~~~~~~~~~~~~div~~~~~~~~~   93 (365)
T cd03807          63 -RPDPGALLRLYKLIRRLRPDVVHTWMYHADL   93 (365)
T ss_pred             -cccHHHHHHHHHHHHhhCCCEEEeccccccH
Confidence             1222333344456668899999998766443

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=87.04  E-value=2.2  Score=36.66  Aligned_cols=27  Identities=15%  Similarity=0.099  Sum_probs=20.6

Q ss_pred             HHHHHHHhhcCCcEEEeCCCcchhhee
Q 030992          135 THALWLMVKIRPQVVMNLSLARVFFSS  161 (168)
Q Consensus       135 ~~sl~il~r~rPdviL~~G~~~~~p~~  161 (168)
                      .....++.+++||+|+|++|..++|..
T Consensus        94 ~~l~~~l~~~~pD~Vi~~~~~~~~~~~  120 (380)
T PRK13609         94 KRLKLLLQAEKPDIVINTFPIIAVPEL  120 (380)
T ss_pred             HHHHHHHHHhCcCEEEEcChHHHHHHH
Confidence            345566778899999999998776643

>TIGR03492 conserved hypothetical protein

Probab=86.51  E-value=1.8  Score=38.49  Aligned_cols=91  Identities=9%  Similarity=0.002  Sum_probs=56.4

Q ss_pred             cCchhHHHHH--HhHHhcccCCCCceEE---EEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcc---h
Q 030992           52 GSGGHTAEMM--NLLSVLQMDRFTPRFY---IAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQS---Y  123 (168)
Q Consensus        52 GSGGHT~EMl--~LL~~l~~~~y~~rty---vv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs---~  123 (168)
                      =|.||-+-..  .+.+.+....-.....   ++++++..        |++.-...    +  .+..+|-.==-+++   .
T Consensus         3 ~snghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~--------e~~~ip~~----g--~~~~~~sgg~~~~~~~~~   68 (396)
T TIGR03492         3 LSNGHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAY--------QNLGIPII----G--PTKELPSGGFSYQSLRGL   68 (396)
T ss_pred             CCCCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHH--------hhCCCcee----C--CCCCCCCCCccCCCHHHH
Confidence            4789987764  4455565321234667   78888777        33221110    1  23334421111233   3


Q ss_pred             hHHHHH-HHHHHHHHHHHHhhc--CCcEEEeCCCcc
Q 030992          124 VTSVWT-TLLATTHALWLMVKI--RPQVVMNLSLAR  156 (168)
Q Consensus       124 ~tSi~t-tl~s~~~sl~il~r~--rPdviL~~G~~~  156 (168)
                      +..++. .+..++.++.++.+.  |||+|+++|-=+
T Consensus        69 ~~~~~~gl~~~~~~~~~~~~~~~~~p~~v~~~Gg~v  104 (396)
T TIGR03492        69 LRDLRAGLVGLTLGQWRALRKWAKKGDLIVAVGDIV  104 (396)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHhhcCCEEEEECcHH
Confidence            557778 888899999999999  999999999655

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=84.78  E-value=8.5  Score=32.40  Aligned_cols=95  Identities=16%  Similarity=0.215  Sum_probs=49.2

Q ss_pred             EEEEEEcCchhHHHHHHhHHhcccC-CCCceEEEEeCCchhhHHHHHHH-HHhhhhhhhccCCceEEEEeccccccCcch
Q 030992           46 STLIVLGSGGHTAEMMNLLSVLQMD-RFTPRFYIAAATDNMSLQKARVF-EDSLLHKKVIKGSSAQFMQIYRSREVGQSY  123 (168)
Q Consensus        46 kilvvLGSGGHT~EMl~LL~~l~~~-~y~~rtyvv~~tD~~S~~k~~~~-e~~~~~~~~~~~~~~~~~~ipRaReV~Qs~  123 (168)
                      |+++|.|+=--..=|--+++.+..+ .++....++  +...+..--... +....       ..+.+ .+...-. .|+ 
T Consensus         1 ~i~~~~gtr~~~~~~~pl~~~l~~~~~~~~~~~~t--g~h~~~~~~~~~~~~~~~-------~~~~~-~l~~~~~-~~~-   68 (363)
T cd03786           1 KILVVTGTRPEYIKLAPLIRALKKDPGFELVLVVT--GQHYDMEMGVTFFEILFI-------IKPDY-DLLLGSD-SQS-   68 (363)
T ss_pred             CEEEEEecCHHHHHHHHHHHHHhcCCCCCEEEEEe--CCCCChhhhHHHHHhhCC-------CCCCE-EEecCCC-CCC-
Confidence            5889999988888888888888854 344333333  322222110111 11110       11122 2222211 122 


Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC
Q 030992          124 VTSVWTTLLATTHALWLMVKIRPQVVMNLSL  154 (168)
Q Consensus       124 ~tSi~ttl~s~~~sl~il~r~rPdviL~~G~  154 (168)
                        ....+..........+.+++||+|++.|.
T Consensus        69 --~~~~~~~~~~~l~~~l~~~~pDvV~~~g~   97 (363)
T cd03786          69 --LGAQTAGLLIGLEAVLLEEKPDLVLVLGD   97 (363)
T ss_pred             --HHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence              12233333445556677889999999985

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=84.11  E-value=1.4  Score=37.71  Aligned_cols=31  Identities=10%  Similarity=0.097  Sum_probs=25.0

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC
Q 030992          124 VTSVWTTLLATTHALWLMVKIRPQVVMNLSL  154 (168)
Q Consensus       124 ~tSi~ttl~s~~~sl~il~r~rPdviL~~G~  154 (168)
                      +..++..+.++.....++.+.|||+|++.|.
T Consensus        64 ~~~~~~~~~~~~~~~~~l~~~kPdivi~~~~   94 (380)
T PRK00025         64 LPRLPRLLKIRRRLKRRLLAEPPDVFIGIDA   94 (380)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence            4556677777778888889999999999983

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=81.60  E-value=36  Score=29.79  Aligned_cols=40  Identities=15%  Similarity=0.043  Sum_probs=29.4

Q ss_pred             EEEEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchh
Q 030992           46 STLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNM   85 (168)
Q Consensus        46 kilvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~   85 (168)
                      .+-+=..|.|++.-...|++.+..+.......++..|.+.
T Consensus        52 ~iW~Ha~s~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~   91 (425)
T PRK05749         52 LIWFHAVSVGETRAAIPLIRALRKRYPDLPILVTTMTPTG   91 (425)
T ss_pred             eEEEEeCCHHHHHHHHHHHHHHHHhCCCCcEEEeCCCccH
Confidence            3889999999999999999998755444455555544333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	168
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	98.4
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	96.79
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	95.7
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	95.0
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	94.64
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	93.06
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	92.42
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	92.13
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	91.8
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	91.54
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	91.32
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	90.86
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	90.34
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	90.26
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	89.28
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	87.31
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	87.19
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	86.99
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	86.96
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	86.88
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	86.63
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	86.02
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	86.01
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	83.95
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	83.13
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	81.26

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=98.40  E-value=6.7e-07  Score=75.99  Aligned_cols=105  Identities=21%  Similarity=0.239  Sum_probs=68.8

Q ss_pred             EEEEEEc-CchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccc---cccCc
Q 030992           46 STLIVLG-SGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRS---REVGQ  121 (168)
Q Consensus        46 kilvvLG-SGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRa---ReV~Q  121 (168)
                      ||++.-| +|||..=.+.+.+.|....++ .+| +++.+..        |.++..+     ..+.+..+|-.   |+---
T Consensus         4 ~i~i~~GGTgGHi~palala~~L~~~g~~-V~~-vg~~~g~--------e~~~v~~-----~g~~~~~i~~~~~~~~~~~   68 (365)
T 3s2u_A            4 NVLIMAGGTGGHVFPALACAREFQARGYA-VHW-LGTPRGI--------ENDLVPK-----AGLPLHLIQVSGLRGKGLK   68 (365)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHHHHHTTCE-EEE-EECSSST--------HHHHTGG-----GTCCEEECC----------
T ss_pred             cEEEEcCCCHHHHHHHHHHHHHHHhCCCE-EEE-EECCchH--------hhchhhh-----cCCcEEEEECCCcCCCCHH
Confidence            6777654 899999999998888754433 444 4445544        2222111     12445555422   12123


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhheeeeec
Q 030992          122 SYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVIL  165 (168)
Q Consensus       122 s~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~~~~~  165 (168)
                      +.+.+++..++++..+..++.++|||+|+++|.-+++|.+++|.
T Consensus        69 ~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~  112 (365)
T 3s2u_A           69 SLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAAR  112 (365)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHH
Confidence            35677889999999999999999999999999999999988764

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=96.79  E-value=0.0054  Score=50.00  Aligned_cols=101  Identities=16%  Similarity=0.161  Sum_probs=56.2

Q ss_pred             cEEEEEE-cCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCc--
Q 030992           45 LSTLIVL-GSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQ--  121 (168)
Q Consensus        45 ~kilvvL-GSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Q--  121 (168)
                      +|++++. |.|||..-++.|.+.|...-+  ...+++..+....   ..+++          ..+.++.++...--+.  
T Consensus         7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~--~V~v~~~~~~~~~---~~~~~----------~g~~~~~~~~~~~~~~~~   71 (364)
T 1f0k_A            7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGW--QVRWLGTADRMEA---DLVPK----------HGIEIDFIRISGLRGKGI   71 (364)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTC--EEEEEECTTSTHH---HHGGG----------GTCEEEECCCCCCTTCCH
T ss_pred             cEEEEEeCCCccchhHHHHHHHHHHHcCC--EEEEEecCCcchh---hhccc----------cCCceEEecCCccCcCcc
Confidence            6888774 458999988888888874433  4444544443211   11111          1244555543211111  


Q ss_pred             -chhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhhe
Q 030992          122 -SYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFS  160 (168)
Q Consensus       122 -s~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~  160 (168)
                       ..+..++..+..+.....++.+.+||+|+++++...++.
T Consensus        72 ~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~  111 (364)
T 1f0k_A           72 KALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPG  111 (364)
T ss_dssp             HHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHH
Confidence             112233444445555556677889999999987655553

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=95.70  E-value=0.028  Score=46.56  Aligned_cols=42  Identities=17%  Similarity=0.256  Sum_probs=28.5

Q ss_pred             CCCCCcEEEEEE-cCchhHHHHHHhHHhcccCCCCceEEEEeCCc
Q 030992           40 KSPQPLSTLIVL-GSGGHTAEMMNLLSVLQMDRFTPRFYIAAATD   83 (168)
Q Consensus        40 ~~~~~~kilvvL-GSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD   83 (168)
                      ++++++|++++. |.|||..-++.|.+.|...-+  ...+++..+
T Consensus        16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~Gh--eV~v~~~~~   58 (412)
T 3otg_A           16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAAGH--EVTFATGEG   58 (412)
T ss_dssp             --CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTC--EEEEEECGG
T ss_pred             cccceeEEEEEcCCCcccHHHHHHHHHHHHHCCC--EEEEEccHH
Confidence            446778997666 788999999999999885443  334444333

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=95.00  E-value=0.1  Score=42.36  Aligned_cols=93  Identities=11%  Similarity=0.078  Sum_probs=57.4

Q ss_pred             CCcEEEEEEc-----CchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEecccc
Q 030992           43 QPLSTLIVLG-----SGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSR  117 (168)
Q Consensus        43 ~~~kilvvLG-----SGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaR  117 (168)
                      +++|+++|..     .||+..-+.++.+.+.  .++ .+.++...+....   ..++..         ..+.++.+|+.+
T Consensus         3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~--g~~-v~v~~~~~~~~~~---~~~~~~---------~~~~~~~~~~~~   67 (394)
T 3okp_A            3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQD--PES-IVVFASTQNAEEA---HAYDKT---------LDYEVIRWPRSV   67 (394)
T ss_dssp             -CCCEEEEESCCTTSCSHHHHHHHHHHTTSC--GGG-EEEEEECSSHHHH---HHHHTT---------CSSEEEEESSSS
T ss_pred             CCceEEEEeCccCCccchHHHHHHHHHHHhc--CCe-EEEEECCCCccch---hhhccc---------cceEEEEccccc
Confidence            4579999987     6999999999999994  333 4444444433321   112211         346788888766


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhh
Q 030992          118 EVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFF  159 (168)
Q Consensus       118 eV~Qs~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p  159 (168)
                      ....         .........++.+.+||+|.++++.....
T Consensus        68 ~~~~---------~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~  100 (394)
T 3okp_A           68 MLPT---------PTTAHAMAEIIREREIDNVWFGAAAPLAL  100 (394)
T ss_dssp             CCSC---------HHHHHHHHHHHHHTTCSEEEESSCTTGGG
T ss_pred             cccc---------hhhHHHHHHHHHhcCCCEEEECCcchHHH
Confidence            5322         12233444566678999999988765433

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=94.64  E-value=0.093  Score=42.87  Aligned_cols=101  Identities=20%  Similarity=0.227  Sum_probs=52.4

Q ss_pred             cEEEEEEcCchhHHHHHHhHHhcccCC-CCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEE-EEeccccccCcc
Q 030992           45 LSTLIVLGSGGHTAEMMNLLSVLQMDR-FTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQF-MQIYRSREVGQS  122 (168)
Q Consensus        45 ~kilvvLGSGGHT~EMl~LL~~l~~~~-y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~-~~ipRaReV~Qs  122 (168)
                      +|++++.|.-.+..-+..+++.+..+. +.....+++..+....+.   ++. .         ...+ ..++-.+. +.+
T Consensus         1 mkIl~v~~~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~---~~~-~---------~~~~~~~~~~~~~-~~~   66 (384)
T 1vgv_A            1 MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQV---LKL-F---------SIVPDYDLNIMQP-GQG   66 (384)
T ss_dssp             CEEEEEECSHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHH---HHH-H---------TCCCSEECCCCST-TSC
T ss_pred             CeEEEEecccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHH---HHH-c---------CCCCCcceecCCC-Ccc
Confidence            589999998777777788888887433 243333344433332211   111 1         0111 22222221 122


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC-cchhheee
Q 030992          123 YVTSVWTTLLATTHALWLMVKIRPQVVMNLSL-ARVFFSSL  162 (168)
Q Consensus       123 ~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~-~~~~p~~~  162 (168)
                      ....   ....+.....++.+++||+|++.|. ..++|..+
T Consensus        67 ~~~~---~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~  104 (384)
T 1vgv_A           67 LTEI---TCRILEGLKPILAEFKPDVVLVHGDTTTTLATSL  104 (384)
T ss_dssp             HHHH---HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHH
T ss_pred             HHHH---HHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHH
Confidence            2221   2333344456777889999999986 44444333

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=93.06  E-value=0.39  Score=38.83  Aligned_cols=27  Identities=22%  Similarity=0.358  Sum_probs=21.9

Q ss_pred             CCcEEEEEEcCchhHHHHHHhHHhccc
Q 030992           43 QPLSTLIVLGSGGHTAEMMNLLSVLQM   69 (168)
Q Consensus        43 ~~~kilvvLGSGGHT~EMl~LL~~l~~   69 (168)
                      +++|++++.|+.+|.+-+..+++.+..
T Consensus         7 ~~mkIl~v~~~~~~~~~~~~l~~~L~~   33 (375)
T 3beo_A            7 ERLKVMTIFGTRPEAIKMAPLVLELQK   33 (375)
T ss_dssp             SCEEEEEEECSHHHHHHHHHHHHHHTT
T ss_pred             cCceEEEEecCcHHHHHHHHHHHHHHh
Confidence            358999999998888777788888764

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=92.42  E-value=0.58  Score=37.60  Aligned_cols=94  Identities=7%  Similarity=-0.027  Sum_probs=51.2

Q ss_pred             cEEEEEEc----CchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccC
Q 030992           45 LSTLIVLG----SGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVG  120 (168)
Q Consensus        45 ~kilvvLG----SGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~  120 (168)
                      +|++++..    .||...-+.++.+.|...-++ .+.++...+.. .      +           ....++.+|..+.-+
T Consensus         1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~-V~v~~~~~~~~-~------~-----------~~~~v~~~~~~~~~~   61 (374)
T 2iw1_A            1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHH-VRVYTQSWEGD-C------P-----------KAFELIQVPVKSHTN   61 (374)
T ss_dssp             -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCC-EEEEESEECSC-C------C-----------TTCEEEECCCCCSSH
T ss_pred             CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCe-EEEEecCCCCC-C------C-----------CCcEEEEEccCcccc
Confidence            46777654    499888888998888755444 33333321111 0      0           124556666443211


Q ss_pred             cchhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhheeee
Q 030992          121 QSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLV  163 (168)
Q Consensus       121 Qs~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~~~  163 (168)
                            .............++.+.+||+|++.+...++++.++
T Consensus        62 ------~~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~   98 (374)
T 2iw1_A           62 ------HGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFA   98 (374)
T ss_dssp             ------HHHHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEEEC
T ss_pred             ------hhhHHHHHHHHHHHHhccCCCEEEEecCCCCceeeec
Confidence                  1111222222234556779999999987666665443

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=92.13  E-value=0.27  Score=42.05  Aligned_cols=107  Identities=16%  Similarity=0.206  Sum_probs=58.6

Q ss_pred             CCCcEEEEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCch--hhHHHHHHHHHhhhhhhhccCCceEEEEecccccc
Q 030992           42 PQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDN--MSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREV  119 (168)
Q Consensus        42 ~~~~kilvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~--~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV  119 (168)
                      .+++|+++|.|+=-...-|-.+++.++.+.......++..+..  ++.+-+..+.  +  +     ..++ +.+.+.   
T Consensus        25 m~~~kI~~v~Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~--i--~-----~~~~-l~v~~~---   91 (403)
T 3ot5_A           25 MAKIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFD--I--K-----PDID-LDIMKK---   91 (403)
T ss_dssp             -CCEEEEEEECSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTT--C--C-----CSEE-CCCCC----
T ss_pred             cccceEEEEEecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcC--C--C-----CCcc-cccCCC---
Confidence            4457999999998777778888888874310123444555433  4443322111  0  0     0111 223222   


Q ss_pred             CcchhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC-cchhheeeee
Q 030992          120 GQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSL-ARVFFSSLVI  164 (168)
Q Consensus       120 ~Qs~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~-~~~~p~~~~~  164 (168)
                      +|+..   -.+...+.....++.++|||+|++.|. ...++.+++|
T Consensus        92 ~~~~~---~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA  134 (403)
T 3ot5_A           92 GQTLA---EITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLAT  134 (403)
T ss_dssp             CCCHH---HHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHH
T ss_pred             CCCHH---HHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHH
Confidence            34443   235556666667888999999999886 3444444433

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=91.80  E-value=1.5  Score=36.04  Aligned_cols=40  Identities=15%  Similarity=0.140  Sum_probs=27.5

Q ss_pred             CCCcEEEEEEcC---chhHHHHHHhHHhcccCCCCceEEEEeCC
Q 030992           42 PQPLSTLIVLGS---GGHTAEMMNLLSVLQMDRFTPRFYIAAAT   82 (168)
Q Consensus        42 ~~~~kilvvLGS---GGHT~EMl~LL~~l~~~~y~~rtyvv~~t   82 (168)
                      .+++|++++..+   ||+..-+.++.+.+...-++ .++++...
T Consensus        38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~-v~v~~~~~   80 (416)
T 2x6q_A           38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIE-ARWFVIEG   80 (416)
T ss_dssp             TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCE-EEEEECCC
T ss_pred             hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCe-EEEEEccC
Confidence            356899988764   89988888888888755444 33444333

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=91.54  E-value=0.48  Score=40.22  Aligned_cols=108  Identities=17%  Similarity=0.114  Sum_probs=59.1

Q ss_pred             CCCcEEEEEEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCc
Q 030992           42 PQPLSTLIVLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQ  121 (168)
Q Consensus        42 ~~~~kilvvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Q  121 (168)
                      ++.+|+++|.|.==...-|-.+++.++.+. .....++..+...+..  .+..+...-+     ..+ -+.+.+   -+|
T Consensus        23 ~~m~ki~~v~Gtr~~~~~~a~li~~l~~~~-~~~~~~~~tG~h~~~~--~~~~~~~~i~-----~~~-~l~~~~---~~~   90 (396)
T 3dzc_A           23 NAMKKVLIVFGTRPEAIKMAPLVQQLCQDN-RFVAKVCVTGQHREML--DQVLELFSIT-----PDF-DLNIME---PGQ   90 (396)
T ss_dssp             -CCEEEEEEECSHHHHHHHHHHHHHHHHCT-TEEEEEEECCSSSHHH--HHHHHHTTCC-----CSE-ECCCCC---TTC
T ss_pred             CCCCeEEEEEeccHhHHHHHHHHHHHHhCC-CCcEEEEEecccHHHH--HHHHHhcCCC-----Cce-eeecCC---CCC
Confidence            455799999999877777888888887431 1234445444443211  1111111100     011 222322   234


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcch-hheeeee
Q 030992          122 SYVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARV-FFSSLVI  164 (168)
Q Consensus       122 s~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~-~p~~~~~  164 (168)
                      +...   .+...+.....++.++|||+|++.|.-.. +|..++|
T Consensus        91 ~~~~---~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa  131 (396)
T 3dzc_A           91 TLNG---VTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAA  131 (396)
T ss_dssp             CHHH---HHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHH
T ss_pred             CHHH---HHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHH
Confidence            4433   34556666667888999999999885433 5544433

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=91.32  E-value=1  Score=37.24  Aligned_cols=43  Identities=19%  Similarity=0.196  Sum_probs=27.4

Q ss_pred             CCCCCCcEEEEE-EcCchhHHHHHHhHHhcccCCCCceEEEEeCCc
Q 030992           39 LKSPQPLSTLIV-LGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATD   83 (168)
Q Consensus        39 ~~~~~~~kilvv-LGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD   83 (168)
                      +..++.+|++++ .|++||..=|+.|.+.|...-  +...+++..+
T Consensus        15 ~~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~G--h~V~v~~~~~   58 (415)
T 3rsc_A           15 IEGRHMAHLLIVNVASHGLILPTLTVVTELVRRG--HRVSYVTAGG   58 (415)
T ss_dssp             ----CCCEEEEECCSCHHHHGGGHHHHHHHHHTT--CEEEEEECGG
T ss_pred             cCcccCCEEEEEeCCCccccccHHHHHHHHHHCC--CEEEEEeCHH
Confidence            334455788765 677899999999999997543  3444444443

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=90.86  E-value=0.78  Score=37.97  Aligned_cols=38  Identities=16%  Similarity=0.135  Sum_probs=27.0

Q ss_pred             CCCcEEEEE-EcCchhHHHHHHhHHhcccCCCCceEEEEe
Q 030992           42 PQPLSTLIV-LGSGGHTAEMMNLLSVLQMDRFTPRFYIAA   80 (168)
Q Consensus        42 ~~~~kilvv-LGSGGHT~EMl~LL~~l~~~~y~~rtyvv~   80 (168)
                      .+.+|++++ .|++||..-|+.|.+.|...-.+ .+++..
T Consensus        18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~Ghe-V~v~~~   56 (398)
T 3oti_A           18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHD-VLIAVA   56 (398)
T ss_dssp             -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCE-EEEEES
T ss_pred             hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCE-EEEecc
Confidence            455899877 58899999999999999854333 334433

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=90.34  E-value=0.71  Score=38.12  Aligned_cols=32  Identities=16%  Similarity=0.162  Sum_probs=23.9

Q ss_pred             CCCCcEEEEE-EcCchhHHHHHHhHHhcccCCC
Q 030992           41 SPQPLSTLIV-LGSGGHTAEMMNLLSVLQMDRF   72 (168)
Q Consensus        41 ~~~~~kilvv-LGSGGHT~EMl~LL~~l~~~~y   72 (168)
                      ++..+|++++ .|++||..-|+.|.+.|...-.
T Consensus        12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~Gh   44 (398)
T 4fzr_A           12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAGH   44 (398)
T ss_dssp             ---CCEEEEECCSSHHHHGGGHHHHHHHHHTTC
T ss_pred             CCCceEEEEEcCCCcchHHHHHHHHHHHHHCCC
Confidence            3456899877 6889999999999999985433

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=90.26  E-value=1.3  Score=36.11  Aligned_cols=37  Identities=11%  Similarity=0.129  Sum_probs=26.1

Q ss_pred             CCcEEEEEEc------CchhHHHHHHhHHhcccCCCCceEEEEe
Q 030992           43 QPLSTLIVLG------SGGHTAEMMNLLSVLQMDRFTPRFYIAA   80 (168)
Q Consensus        43 ~~~kilvvLG------SGGHT~EMl~LL~~l~~~~y~~rtyvv~   80 (168)
                      ||+|+++|..      .||-..-+.+|.+.|...-++ .+.++.
T Consensus         1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~-V~v~~~   43 (439)
T 3fro_A            1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHE-VLVFTP   43 (439)
T ss_dssp             CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred             CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCe-EEEEec
Confidence            5789999983      599888888888888754444 444443

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=89.28  E-value=1.5  Score=35.56  Aligned_cols=25  Identities=12%  Similarity=0.231  Sum_probs=17.8

Q ss_pred             cEEEEEEcCchhHHHHHHhHHhccc
Q 030992           45 LSTLIVLGSGGHTAEMMNLLSVLQM   69 (168)
Q Consensus        45 ~kilvvLGSGGHT~EMl~LL~~l~~   69 (168)
                      +|++++.|+.++..-+..+++.+..
T Consensus         6 mkIl~v~~~~~~~~~~~~l~~~L~~   30 (376)
T 1v4v_A            6 KRVVLAFGTRPEATKMAPVYLALRG   30 (376)
T ss_dssp             EEEEEEECSHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEEeccHHHHHHHHHHHHHHh
Confidence            6899999876555555667777763

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=87.31  E-value=2.8  Score=34.22  Aligned_cols=27  Identities=26%  Similarity=0.228  Sum_probs=21.9

Q ss_pred             CcEEEEEE-cCchhHHHHHHhHHhcccC
Q 030992           44 PLSTLIVL-GSGGHTAEMMNLLSVLQMD   70 (168)
Q Consensus        44 ~~kilvvL-GSGGHT~EMl~LL~~l~~~   70 (168)
                      ++|++++. |.+||..-|+.|.+.|...
T Consensus         1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~   28 (391)
T 3tsa_A            1 HMRVLVVPLPYPTHLMAMVPLCWALQAS   28 (391)
T ss_dssp             CCEEEEECCSCHHHHHTTHHHHHHHHHT
T ss_pred             CcEEEEEcCCCcchhhhHHHHHHHHHHC
Confidence            36887665 8899999999999998744

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=87.19  E-value=3.9  Score=34.16  Aligned_cols=37  Identities=24%  Similarity=0.283  Sum_probs=25.6

Q ss_pred             cEEEEE-EcCchhHHHHHHhHHhcccCCCCceEEEEeCCc
Q 030992           45 LSTLIV-LGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATD   83 (168)
Q Consensus        45 ~kilvv-LGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD   83 (168)
                      +|++++ .||.||..=|+.|-+.|...-.  ...+++..|
T Consensus         1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh--~V~v~~~~~   38 (404)
T 3h4t_A            1 MGVLITGCGSRGDTEPLVALAARLRELGA--DARMCLPPD   38 (404)
T ss_dssp             -CEEEEEESSHHHHHHHHHHHHHHHHTTC--CEEEEECGG
T ss_pred             CeEEEEeCCCCccHHHHHHHHHHHHHCCC--eEEEEeCHH
Confidence            466555 7999999999999999975433  334444444

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=86.99  E-value=2.3  Score=35.51  Aligned_cols=34  Identities=21%  Similarity=0.174  Sum_probs=23.7

Q ss_pred             cEEEE-EEcCchhHHHHHHhHHhcccCCCCceEEEE
Q 030992           45 LSTLI-VLGSGGHTAEMMNLLSVLQMDRFTPRFYIA   79 (168)
Q Consensus        45 ~kilv-vLGSGGHT~EMl~LL~~l~~~~y~~rtyvv   79 (168)
                      +|+++ -.|++||..=|+.|.+.|...-.+ .+|+.
T Consensus         1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~-V~~~~   35 (415)
T 1iir_A            1 MRVLLATCGSRGDTEPLVALAVRVRDLGAD-VRMCA   35 (415)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCE-EEEEE
T ss_pred             CeEEEEcCCCchhHHHHHHHHHHHHHCCCe-EEEEc
Confidence            35655 457889999999999999854333 44443

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=86.96  E-value=1.1  Score=36.94  Aligned_cols=34  Identities=12%  Similarity=0.200  Sum_probs=23.0

Q ss_pred             CCCCCcEEEEEE------------cCchhHHHHHHhHHhcccCCCC
Q 030992           40 KSPQPLSTLIVL------------GSGGHTAEMMNLLSVLQMDRFT   73 (168)
Q Consensus        40 ~~~~~~kilvvL------------GSGGHT~EMl~LL~~l~~~~y~   73 (168)
                      ...+.+||+++.            +.||+..-+.++.+.|...-++
T Consensus        16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~   61 (438)
T 3c48_A           16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIE   61 (438)
T ss_dssp             ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCE
T ss_pred             cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCE
Confidence            345678999998            4699999999999988754444

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=86.88  E-value=2.6  Score=35.12  Aligned_cols=33  Identities=21%  Similarity=0.123  Sum_probs=23.9

Q ss_pred             EEE-EEEcCchhHHHHHHhHHhcccCCCCceEEEE
Q 030992           46 STL-IVLGSGGHTAEMMNLLSVLQMDRFTPRFYIA   79 (168)
Q Consensus        46 kil-vvLGSGGHT~EMl~LL~~l~~~~y~~rtyvv   79 (168)
                      |++ +..|++||..=|+.|.+.|...-.+ .+++.
T Consensus         2 rIl~~~~~~~GH~~p~l~la~~L~~~Gh~-V~~~~   35 (416)
T 1rrv_A            2 RVLLSVCGTRGDVEIGVALADRLKALGVQ-TRMCA   35 (416)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHHHHTTCE-EEEEE
T ss_pred             eEEEEecCCCccHHHHHHHHHHHHHCCCe-EEEEe
Confidence            554 4678999999999999999854333 44444

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=86.63  E-value=0.96  Score=36.24  Aligned_cols=38  Identities=24%  Similarity=0.272  Sum_probs=26.5

Q ss_pred             CCcEEEEEEcC-----------------chhHHHHHHhHHhcccCCCCceEEEEeCC
Q 030992           43 QPLSTLIVLGS-----------------GGHTAEMMNLLSVLQMDRFTPRFYIAAAT   82 (168)
Q Consensus        43 ~~~kilvvLGS-----------------GGHT~EMl~LL~~l~~~~y~~rtyvv~~t   82 (168)
                      +++|++++..+                 ||...-..++.+.|...-+  ...++...
T Consensus         2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~--~v~v~~~~   56 (342)
T 2iuy_A            2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGH--EVFLLGAP   56 (342)
T ss_dssp             -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTC--EEEEESCT
T ss_pred             CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCC--eEEEEecC
Confidence            35899999877                 9988888888888874433  34444433

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=86.02  E-value=0.39  Score=39.13  Aligned_cols=40  Identities=18%  Similarity=0.205  Sum_probs=26.1

Q ss_pred             CCCCcEEEEEEcC-----chhHHHHHHhHHhcccCCCCceEEEEeCC
Q 030992           41 SPQPLSTLIVLGS-----GGHTAEMMNLLSVLQMDRFTPRFYIAAAT   82 (168)
Q Consensus        41 ~~~~~kilvvLGS-----GGHT~EMl~LL~~l~~~~y~~rtyvv~~t   82 (168)
                      ..+++|++++...     ||+..-+.++.+.|...-++  ..++...
T Consensus        17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~--V~v~~~~   61 (406)
T 2gek_A           17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHE--VSVLAPA   61 (406)
T ss_dssp             ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCE--EEEEESC
T ss_pred             CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCe--EEEEecC
Confidence            4567899999853     99988889998988854444  3444443

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=86.01  E-value=3.3  Score=34.35  Aligned_cols=27  Identities=11%  Similarity=0.182  Sum_probs=20.9

Q ss_pred             cEEEEEE-cCchhHHHHHHhHHhcccCC
Q 030992           45 LSTLIVL-GSGGHTAEMMNLLSVLQMDR   71 (168)
Q Consensus        45 ~kilvvL-GSGGHT~EMl~LL~~l~~~~   71 (168)
                      +|++++- +++||..=|+.|.+.|...-
T Consensus         8 ~kIl~~~~~~~Gh~~p~~~la~~L~~~G   35 (430)
T 2iyf_A            8 AHIAMFSIAAHGHVNPSLEVIRELVARG   35 (430)
T ss_dssp             CEEEEECCSCHHHHGGGHHHHHHHHHTT
T ss_pred             ceEEEEeCCCCccccchHHHHHHHHHCC
Confidence            5787654 57799999999999987543

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=83.95  E-value=1.8  Score=36.86  Aligned_cols=38  Identities=11%  Similarity=-0.048  Sum_probs=26.9

Q ss_pred             CCcEEEEEEc----------------CchhHHHHHHhHHhcccCCCCceEEEEeC
Q 030992           43 QPLSTLIVLG----------------SGGHTAEMMNLLSVLQMDRFTPRFYIAAA   81 (168)
Q Consensus        43 ~~~kilvvLG----------------SGGHT~EMl~LL~~l~~~~y~~rtyvv~~   81 (168)
                      +++||++|..                .||+..-+.++.+.|...-++ .+.++..
T Consensus         6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~-V~v~~~~   59 (499)
T 2r60_A            6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQ-VDIITRR   59 (499)
T ss_dssp             -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCE-EEEEEEC
T ss_pred             ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCe-EEEEeCC
Confidence            3589999984                599999999999998855444 3444433

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=83.13  E-value=3.2  Score=34.87  Aligned_cols=36  Identities=11%  Similarity=0.127  Sum_probs=25.1

Q ss_pred             CCcEEEEE-EcCchhHHHHHHhHHhcccCCCCceEEEE
Q 030992           43 QPLSTLIV-LGSGGHTAEMMNLLSVLQMDRFTPRFYIA   79 (168)
Q Consensus        43 ~~~kilvv-LGSGGHT~EMl~LL~~l~~~~y~~rtyvv   79 (168)
                      ..+|++++ .|++||..=|+.+.+.|...-++ .+|+.
T Consensus        19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~Ghe-V~~~~   55 (441)
T 2yjn_A           19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHE-VRVVA   55 (441)
T ss_dssp             CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCE-EEEEE
T ss_pred             CccEEEEEcCCCcchHhHHHHHHHHHHHCCCe-EEEEe
Confidence            44788766 45679999999999999854333 44443

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=81.26  E-value=8.1  Score=31.21  Aligned_cols=26  Identities=23%  Similarity=0.293  Sum_probs=21.0

Q ss_pred             EEEEE-EcCchhHHHHHHhHHhcccCC
Q 030992           46 STLIV-LGSGGHTAEMMNLLSVLQMDR   71 (168)
Q Consensus        46 kilvv-LGSGGHT~EMl~LL~~l~~~~   71 (168)
                      |++++ .|+.||..=|+.|.+.|...-
T Consensus         6 ~il~~~~~~~Ghv~~~~~La~~L~~~G   32 (402)
T 3ia7_A            6 HILFANVQGHGHVYPSLGLVSELARRG   32 (402)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEeCCCCcccccHHHHHHHHHhCC
Confidence            77655 677899999999999998543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	168
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	97.8
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	92.44
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	85.61
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	80.55

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=7.4e-05  Score=58.40  Aligned_cols=104  Identities=18%  Similarity=0.195  Sum_probs=66.7

Q ss_pred             EEEEEE-cCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCcc--
Q 030992           46 STLIVL-GSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQS--  122 (168)
Q Consensus        46 kilvvL-GSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Qs--  122 (168)
                      |++|.- |+|||..-.+.|.+.|..+-+  ...+++++|..+.        ++..+     ..+.+..+|-+...++.  
T Consensus         2 kili~~~GtGGHv~~a~al~~~L~~~G~--eV~~i~~~~~~~~--------~~~~~-----~~~~~~~~~~~~~~~~~~~   66 (351)
T d1f0ka_           2 RLMVMAGGTGGHVFPGLAVAHHLMAQGW--QVRWLGTADRMEA--------DLVPK-----HGIEIDFIRISGLRGKGIK   66 (351)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHHHHTTTC--EEEEEECTTSTHH--------HHGGG-----GTCEEEECCCCCCTTCCHH
T ss_pred             EEEEEcCCcHHHHHHHHHHHHHHHhCCC--EEEEEEeCCcchh--------hcccc-----cCCcEEEEECCCcCCCCHH
Confidence            566654 468999999999999974443  3444556665532        11111     12445555543322333  


Q ss_pred             -hhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCCcchhheeeee
Q 030992          123 -YVTSVWTTLLATTHALWLMVKIRPQVVMNLSLARVFFSSLVI  164 (168)
Q Consensus       123 -~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~~~~~p~~~~~  164 (168)
                       .+..++.....+.....++.+.+||+++++|.....+.+..+
T Consensus        67 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a  109 (351)
T d1f0ka_          67 ALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAA  109 (351)
T ss_dssp             HHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHH
T ss_pred             HHHHHHHHHHHhHHHHHHHhhccccceeeecccchhhhhhhhh
Confidence             334466666777788889999999999999998887776554

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=92.44  E-value=0.5  Score=35.86  Aligned_cols=92  Identities=15%  Similarity=0.131  Sum_probs=51.0

Q ss_pred             cEEEE-EEcCchhHHHHHHhHHhcccCCCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccc-------
Q 030992           45 LSTLI-VLGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRS-------  116 (168)
Q Consensus        45 ~kilv-vLGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRa-------  116 (168)
                      ||+++ -.|||||..=|+.|-+.|...-+. .++ ++..+..  +.+   |+.          ++.++.++..       
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~-V~~-~~~~~~~--~~v---~~~----------g~~~~~~~~~~~~~~~~   63 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGAD-ARM-CLPPDYV--ERC---AEV----------GVPMVPVGRAVRAGARE   63 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCE-EEE-EECGGGH--HHH---HHH----------TCCEEECSSCSSGGGSC
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCE-EEE-EEChhhH--hHH---HHC----------CCeEEECCccHHHHhhC
Confidence            45654 789999999999999999854333 444 4444332  222   211          2344444422       


Q ss_pred             -cccCcchhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC
Q 030992          117 -REVGQSYVTSVWTTLLATTHALWLMVKIRPQVVMNLSL  154 (168)
Q Consensus       117 -ReV~Qs~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~  154 (168)
                       ..-..+.......++...+..+.-.. ++||+++..+.
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~D~vi~~~~  101 (391)
T d1pn3a_          64 PGELPPGAAEVVTEVVAEWFDKVPAAI-EGCDAVVTTGL  101 (391)
T ss_dssp             TTCCCTTCGGGHHHHHHHHHHHHHHHH-TTCSEEEEEEC
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEccc
Confidence             11122333344455555555544433 46999998764

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=85.61  E-value=1.7  Score=34.77  Aligned_cols=106  Identities=20%  Similarity=0.215  Sum_probs=56.8

Q ss_pred             CCcEEEEEEcCchhHHHHHHhHHhcccC-CCCceEEEEeCCchhhHHHHHHHHHhhhhhhhccCCceEEEEeccccccCc
Q 030992           43 QPLSTLIVLGSGGHTAEMMNLLSVLQMD-RFTPRFYIAAATDNMSLQKARVFEDSLLHKKVIKGSSAQFMQIYRSREVGQ  121 (168)
Q Consensus        43 ~~~kilvvLGSGGHT~EMl~LL~~l~~~-~y~~rtyvv~~tD~~S~~k~~~~e~~~~~~~~~~~~~~~~~~ipRaReV~Q  121 (168)
                      |++|+|+|.|+=.=..=|-.+++.++.+ .++....+++.--.++..-..++  .+.       ..++ +.+...   ++
T Consensus         1 ~k~Ki~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~--~i~-------~~~~-~~~~~~---~~   67 (377)
T d1o6ca_           1 KKLKVMTVFGTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAF--HIK-------PDFD-LNIMKE---RQ   67 (377)
T ss_dssp             CCEEEEEEECSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHT--TCC-------CSEE-CCCCCT---TC
T ss_pred             CCceEEEEEEchHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhc--CCC-------Ccee-eecCCC---CC
Confidence            4689999999999999999999999864 34433333332212333211111  000       1111 122211   12


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhcCCcEEEeCCC-cchhheeeee
Q 030992          122 SYVTSVWTTLLATTHALWLMVKIRPQVVMNLSL-ARVFFSSLVI  164 (168)
Q Consensus       122 s~~tSi~ttl~s~~~sl~il~r~rPdviL~~G~-~~~~p~~~~~  164 (168)
                      +.-.+   +-..+..--.++.+++||+|+.-|- ..++..+++|
T Consensus        68 ~~~~~---~~~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa  108 (377)
T d1o6ca_          68 TLAEI---TSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAA  108 (377)
T ss_dssp             CHHHH---HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHH
T ss_pred             CHHHH---HHHHHHhhhhhhhhcccceeEeeecccccchhhhhh
Confidence            32111   2222223336778999999999996 4444444444

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=80.55  E-value=2.6  Score=31.49  Aligned_cols=38  Identities=21%  Similarity=0.274  Sum_probs=26.3

Q ss_pred             cEEEEE-EcCchhHHHHHHhHHhcccCCCCceEEEEeCCch
Q 030992           45 LSTLIV-LGSGGHTAEMMNLLSVLQMDRFTPRFYIAAATDN   84 (168)
Q Consensus        45 ~kilvv-LGSGGHT~EMl~LL~~l~~~~y~~rtyvv~~tD~   84 (168)
                      ||+++. .||+||..=|+.|-+.|-..=  +...+++..|.
T Consensus         1 mkil~~~~gt~Gh~~P~lala~~L~~~G--h~V~~~~~~~~   39 (401)
T d1iira_           1 MRVLLATCGSRGDTEPLVALAVRVRDLG--ADVRMCAPPDC   39 (401)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTT--CEEEEEECGGG
T ss_pred             CEEEEECCCChhHHHHHHHHHHHHHHCC--CEEEEEeCcch
Confidence            467655 899999999999999987432  33334444443