Citrus Sinensis ID: 031038

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGTSIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRAH
Secondary Structure (PSIPRED)
ccccccEEEEEHHHHHHHHHHHHHHHHHHEEEEcccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccEEEEcccccEEEEEEcccccccHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccHHcccccccccEEEEEcccccEEEEEEEcccccccHHHHHHHHHcc
Coil and Loop (DISEMBL)
MVHKSDLVIIGICVGLALGILIATLVFFGLrwykkhdhfrrcsnersvathpiringlgtsidfsapvansvavkasgfpqkksqvswwsnhskdrftsapsasgipryayKDIQKATQNFTNilgqgafgpvykatmpsggVAAIKVLAsdshqgekEFQTEVRAH
Flexible Loop (DISEMBL)
MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHfrrcsnersvathpiriNGLGTSIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSkdrftsapsasgIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDShqgekefqtevrah
Low Complexity Region (SEG)
MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGTSIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRAH
Disordered region (IsUnstruct)
*****DLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGTSIDFSAPVANSVAVKA**********SWW****************IPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVL******************
Disordered Region (DISOPRED)
****SDL**IGICVGLALGILIATLVFFGLRW******************************DFSAPVA*************************************PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAI*V************QTEV***
Disordered Region (DISEMBL)
MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGTSIDFSAPVANSVAVKA***************HSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDS**************
Disordered Region (DISPRO)
***KSDLVIIGICVGLALGILIATLVFFGLRWYKKHDH*******************************************************************IPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASD******EF*******
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGTSIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRAH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	167	2.2.26 [Sep-21-2011]
Q9LFV3	436	Probable leucine-rich rep	yes	no	0.952	0.364	0.542	2e-36
C0LGU5	614	Probable LRR receptor-lik	no	no	0.359	0.097	0.5	9e-11
Q8RWZ5	821	G-type lectin S-receptor-	no	no	0.443	0.090	0.453	1e-10
Q9C821	509	Proline-rich receptor-lik	no	no	0.341	0.111	0.508	8e-10
Q9ZUE0	720	Proline-rich receptor-lik	no	no	0.544	0.126	0.37	1e-09
O65482	830	Putative cysteine-rich re	no	no	0.526	0.106	0.404	2e-09
O65483	636	Cysteine-rich receptor-li	no	no	0.377	0.099	0.476	3e-09
Q9C5S8	659	Cysteine-rich receptor-li	no	no	0.532	0.135	0.389	3e-09
Q9LV48	652	Proline-rich receptor-lik	no	no	0.341	0.087	0.474	7e-09
Q9ZNQ8	633	Proline-rich receptor-lik	no	no	0.335	0.088	0.5	1e-08

>sp|Q9LFV3|Y5157_ARATH Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 OS=Arabidopsis thaliana GN=At5g15730 PE=2 SV=1

 Score =  151 bits (382), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/164 (54%), Positives = 112/164 (68%), Gaps = 5/164 (3%)

Query: 1   MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGT 60
           MV++SDLV+IGI VGLALG+L+A L+FF ++WY    H RRC+NE++  T P+     G 
Sbjct: 1   MVNRSDLVVIGISVGLALGLLLALLLFFAIKWYYGRSHLRRCANEQNSPTLPVHTAKRGV 60

Query: 61  SIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQN 120
            I        S     +G P +     WW+NH+KD   SA   SGIPRY YKDIQKATQN
Sbjct: 61  VIPDDRANTESSQPPENGAPTQHQ--PWWNNHTKDLTVSA---SGIPRYNYKDIQKATQN 115

Query: 121 FTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           FT +LGQG+FGPVYKA MP+G +AA KV  S+S QG++EFQTEV
Sbjct: 116 FTTVLGQGSFGPVYKAVMPNGELAAAKVHGSNSSQGDREFQTEV 159

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|C0LGU5|Y5457_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)

Query: 106 IPRYAYKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTE 163
           + R+++++IQ AT NF+  NILGQG FG VYK  +P+G V A+K L    + GE +FQTE
Sbjct: 285 LKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTE 344

Query: 164 VR 165
           V 
Sbjct: 345 VE 346

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1

 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 12/86 (13%)

Query: 80  PQKKSQVSWWSNHSKDRFTSAPSASGIP-RYAYKDIQKATQNFTNILGQGAFGPVYKATM 138
           PQ+ S+        +D F    + SG+P R+AYKD+Q AT NF+  LGQG FG VY+ T+
Sbjct: 463 PQESSE--------EDNFLE--NLSGMPIRFAYKDLQSATNNFSVKLGQGGFGSVYEGTL 512

Query: 139 PSGGVAAIKVLASDSHQGEKEFQTEV 164
           P G   A+K L     QG+KEF+ EV
Sbjct: 513 PDGSRLAVKKLEGIG-QGKKEFRAEV 537

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9C821|PEK15_ARATH Proline-rich receptor-like protein kinase PERK15 OS=Arabidopsis thaliana GN=PERK15 PE=1 SV=1

 Score = 63.2 bits (152), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 2/59 (3%)

Query: 109 YAYKDIQKATQNF--TNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR 165
           + Y+D+ KAT NF  TN+LGQG FG V++  +  G + AIK L S S QGE+EFQ E++
Sbjct: 131 FTYEDLSKATSNFSNTNLLGQGGFGYVHRGVLVDGTLVAIKQLKSGSGQGEREFQAEIQ 189

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZUE0|PEK12_ARATH Proline-rich receptor-like protein kinase PERK12 OS=Arabidopsis thaliana GN=PERK12 PE=2 SV=2

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 9/100 (9%)

Query: 68  VANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFT--NIL 125
           + NS      G+P  + Q S   +       SA   SG   ++Y+++ + TQ F   NIL
Sbjct: 325 MGNSYGTAGGGYPHHQMQSSGTPD-------SAILGSGQTHFSYEELAEITQGFARKNIL 377

Query: 126 GQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR 165
           G+G FG VYK T+  G V A+K L + S QG++EF+ EV 
Sbjct: 378 GEGGFGCVYKGTLQDGKVVAVKQLKAGSGQGDREFKAEVE 417

Regulates the auxin-related MAX (More Axillary Growth) pathway during the shoot branching.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O65482|CRK23_ARATH Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1

 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 6/94 (6%)

Query: 73  AVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNF--TNILGQGAF 130
           A+      +K ++V+     + D  T+A    G  ++ +K I  AT NF   N LGQG F
Sbjct: 464 AIPLLNVKRKDTEVTEPLAENGDSITTA----GSLQFDFKAIVAATNNFLPINKLGQGGF 519

Query: 131 GPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           G VYK T PSG   A+K L+  S QGE+EF+ EV
Sbjct: 520 GEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEV 553

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65483|CRK24_ARATH Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=3 SV=2

 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%)

Query: 102 SASGIPRYAYKDIQKATQNFTNI--LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKE 159
           + SG  ++ +K I+ AT NF N+  LG G FG VYK T P+G   A+K L+  S QGE+E
Sbjct: 293 TTSGSLQFEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEE 352

Query: 160 FQTEV 164
           F+ EV
Sbjct: 353 FKNEV 357

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9C5S8|CRK5_ARATH Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 6/95 (6%)

Query: 72  VAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFT--NILGQGA 129
           + V    F   K     +    +D  T+A    G  ++ +K I+ AT  F+  N LGQG 
Sbjct: 295 ICVAVFSFHASKRAKKTYDTPEEDDITTA----GSLQFDFKVIEAATDKFSMCNKLGQGG 350

Query: 130 FGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           FG VYK T+P+G   A+K L+  S QGEKEF+ EV
Sbjct: 351 FGQVYKGTLPNGVQVAVKRLSKTSGQGEKEFKNEV 385

Involved in multiple distinct defense responses. May function as a disease resistance (R) protein.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LV48|PERK1_ARATH Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=1 SV=1

 Score = 60.1 bits (144), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)

Query: 109 YAYKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR 165
           + Y+++ +AT  F+  N+LGQG FG V+K  +PSG   A+K L + S QGE+EFQ EV 
Sbjct: 268 FTYEELSRATNGFSEANLLGQGGFGYVHKGILPSGKEVAVKQLKAGSGQGEREFQAEVE 326

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZNQ8|PERK4_ARATH Proline-rich receptor-like protein kinase PERK4 OS=Arabidopsis thaliana GN=PERK4 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 109 YAYKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           + Y+++  AT  FT  N+LGQG FG V+K  +PSG   A+K L + S QGE+EFQ EV
Sbjct: 272 FTYQELAAATGGFTDANLLGQGGFGYVHKGVLPSGKEVAVKSLKAGSGQGEREFQAEV 329

Required during abscisic acid (ABA)-mediated activation of Ca(2+) channels. Regulates ABA signaling pathways. Modulates the expression of genes related to cell elongation and ABA signaling during root growth.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
505146	422	protein-serine/threonine kinase [Nicotia	0.964	0.381	0.707	6e-62
224120712	419	predicted protein [Populus trichocarpa]	0.964	0.384	0.690	9e-62
255569978	420	Serine/threonine-protein kinase PBS1, pu	0.958	0.380	0.695	2e-60
224119236	417	predicted protein [Populus trichocarpa]	0.964	0.386	0.684	1e-59
359488371	424	PREDICTED: probable leucine-rich repeat	0.964	0.379	0.678	3e-58
356573737	424	PREDICTED: probable leucine-rich repeat	0.964	0.379	0.634	4e-53
356568849	422	PREDICTED: probable leucine-rich repeat	0.964	0.381	0.585	5e-48
359806620	426	probable leucine-rich repeat receptor-li	0.964	0.377	0.577	5e-47
255640116	426	unknown [Glycine max]	0.964	0.377	0.559	9e-45
147767799	477	hypothetical protein VITISV_019641 [Viti	0.964	0.337	0.472	3e-44

>gi|505146|dbj|BAA06538.1| protein-serine/threonine kinase [Nicotiana tabacum]

 Score =  241 bits (616), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 116/164 (70%), Positives = 135/164 (82%), Gaps = 3/164 (1%)

Query: 1   MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGT 60
           MVHK+DLVIIGICVG+A GILIA+LVFFG+RWYK+    +R +NER +A  PIR NGL T
Sbjct: 1   MVHKADLVIIGICVGVAFGILIASLVFFGIRWYKRRARLQRQANERCIAALPIRTNGLNT 60

Query: 61  SIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQN 120
           S+DFSA +++SVA+  SGFP   SQ SWWS+ SK  F    SASGIPRY+YKDIQKATQN
Sbjct: 61  SVDFSASLSSSVAINTSGFPATNSQPSWWSHPSKVHFA---SASGIPRYSYKDIQKATQN 117

Query: 121 FTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           FT ILGQG+FGPVYKATMP+GGV A+KVLA+DS QGEKEF TEV
Sbjct: 118 FTTILGQGSFGPVYKATMPAGGVVAVKVLATDSKQGEKEFFTEV 161

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120712|ref|XP_002330933.1| predicted protein [Populus trichocarpa] gi|222873127|gb|EEF10258.1| predicted protein [Populus trichocarpa]

 Score =  241 bits (614), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 114/165 (69%), Positives = 137/165 (83%), Gaps = 4/165 (2%)

Query: 1   MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGT 60
           MV+K D V+IGI VGLALGILIA+LVFFG+RWYK+  + RRCSN+RS+ T PIR+NGLGT
Sbjct: 1   MVYKGDFVVIGISVGLALGILIASLVFFGIRWYKRRAYLRRCSNDRSLPTLPIRMNGLGT 60

Query: 61  SIDFSAPVANSVAVKASGFPQKKSQV-SWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQ 119
           S DFS  +ANS+ ++ +  PQK SQV SWW++HSKDRF    S SGI RY+YKDIQKATQ
Sbjct: 61  SNDFSDSLANSITIQGTEHPQKSSQVSSWWNHHSKDRFA---STSGILRYSYKDIQKATQ 117

Query: 120 NFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           NFT +LGQG+FGPVYKA MP+G + A+KVLAS+S QGEKEFQTEV
Sbjct: 118 NFTTVLGQGSFGPVYKAVMPTGEILAVKVLASNSKQGEKEFQTEV 162

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569978|ref|XP_002525952.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis] gi|223534781|gb|EEF36472.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]

 Score =  236 bits (603), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/164 (69%), Positives = 136/164 (82%), Gaps = 4/164 (2%)

Query: 1   MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGT 60
           MVH+SDLVIIG+ VGLALGILIA+LVFFG+RWYK   + RRC+NERS+ T PIR NGLGT
Sbjct: 1   MVHQSDLVIIGVSVGLALGILIASLVFFGIRWYKNRANLRRCANERSLTTLPIRTNGLGT 60

Query: 61  SIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQN 120
           S DFSA +A+S+ ++ S  P+K S   WW++HSKD+F    SASGI RY+YKDIQKATQN
Sbjct: 61  STDFSASLAHSINIQGSEKPEKSSPFFWWNHHSKDQFA---SASGILRYSYKDIQKATQN 117

Query: 121 FTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           FT ILGQG+FGPVYKA +P GGV A+KVLA++S QGEKEFQTEV
Sbjct: 118 FTTILGQGSFGPVYKAGLP-GGVVAVKVLATNSKQGEKEFQTEV 160

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119236|ref|XP_002331261.1| predicted protein [Populus trichocarpa] gi|222873686|gb|EEF10817.1| predicted protein [Populus trichocarpa]

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 113/165 (68%), Positives = 136/165 (82%), Gaps = 4/165 (2%)

Query: 1   MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGT 60
           MVHK DLV+IGI VGLALGILIA+L+FFG+ WYKK  + R+CSNER + T PIR+NGLGT
Sbjct: 1   MVHKGDLVVIGISVGLALGILIASLIFFGIWWYKKRSNLRQCSNERILPTLPIRMNGLGT 60

Query: 61  SIDFSAPVANSVAVKASGFPQKKSQV-SWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQ 119
           S DFSA +A+S+ ++ S  PQK S V SWW++HSKD+F    SASGI RY+YKDIQKATQ
Sbjct: 61  SNDFSASLASSITIRGSEHPQKSSPVSSWWNHHSKDQFA---SASGILRYSYKDIQKATQ 117

Query: 120 NFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
            FT +LGQG+FGPVYKA MP+G V A+KVLAS+S QGEKEFQTE+
Sbjct: 118 KFTTVLGQGSFGPVYKAVMPTGEVLAVKVLASNSKQGEKEFQTEI 162

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488371|ref|XP_002281983.2| PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Vitis vinifera] gi|298204439|emb|CBI16919.3| unnamed protein product [Vitis vinifera]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 112/165 (67%), Positives = 129/165 (78%), Gaps = 4/165 (2%)

Query: 1   MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGT 60
           MV+ +DLV IGI  GLA+GILIA+LVF G+RWYKKH H RRC+NER     PIR NGL  
Sbjct: 1   MVNSADLVTIGISAGLAIGILIASLVFCGIRWYKKHSHLRRCANERCSTALPIRTNGLDA 60

Query: 61  SIDFSAPVANSVAVKASGFPQKKSQVSWWSN-HSKDRFTSAPSASGIPRYAYKDIQKATQ 119
           SID SA V+NS+A+  S FP K S + WWS+ H KD+     SASGIPRY+YKDIQKAT 
Sbjct: 61  SIDSSASVSNSIAIPGSEFPAKDSHLFWWSHRHDKDQLA---SASGIPRYSYKDIQKATH 117

Query: 120 NFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           NFT ILGQG+FGPVYKATM +GGV A+KVLAS+S QGEKEFQTEV
Sbjct: 118 NFTTILGQGSFGPVYKATMATGGVVAVKVLASNSKQGEKEFQTEV 162

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573737|ref|XP_003555013.1| PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Glycine max]

 Score =  212 bits (540), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 104/164 (63%), Positives = 126/164 (76%), Gaps = 3/164 (1%)

Query: 1   MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGT 60
           MV ++DLVIIG+ VGL LGILI+ L+FFG+RWYKK  H RR +NE S+ T PIR NGLGT
Sbjct: 1   MVRQADLVIIGVSVGLTLGILISCLIFFGIRWYKKRAHIRRSANESSLTTLPIRTNGLGT 60

Query: 61  SIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQN 120
           S DFSA + +S+A   S   ++ S  SWW++ +KDRF    SASGI +Y YK+IQKATQN
Sbjct: 61  SSDFSASLDSSIASSWSENLKRNSHFSWWNHQNKDRF---ASASGILKYLYKEIQKATQN 117

Query: 121 FTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           FT  LGQG+FG VYKATMP+G V A+KVLA +S QGEKEFQTEV
Sbjct: 118 FTTTLGQGSFGTVYKATMPTGEVVAVKVLAPNSKQGEKEFQTEV 161

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568849|ref|XP_003552620.1| PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Glycine max]

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/164 (58%), Positives = 121/164 (73%), Gaps = 3/164 (1%)

Query: 1   MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGT 60
           MV ++DLVII + VG+ALG+LIA L++ G+R YKK  H  R +NE S+ T PIR NGL T
Sbjct: 1   MVDQADLVIICVSVGVALGVLIAYLIYVGIRCYKKRAHLSRSANEPSLTTIPIRTNGLET 60

Query: 61  SIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQN 120
           SIDFSA + +S+A   S  P K S  +WWS+ +KD F    S SGI +Y+YK+IQKATQN
Sbjct: 61  SIDFSASLTSSIATSRSPNPHKSSHSTWWSHQNKDGFA---SVSGILKYSYKEIQKATQN 117

Query: 121 FTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           FTN LG+G+FG VYKA MP+G V A+K+L  +S QGEKEFQTEV
Sbjct: 118 FTNTLGEGSFGTVYKAMMPTGEVVAVKMLGPNSKQGEKEFQTEV 161

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806620|ref|NP_001241274.1| probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Glycine max] gi|223452304|gb|ACM89480.1| protein-serine/threonine kinase [Glycine max] gi|223452562|gb|ACM89608.1| protein-serine/threonine kinase [Glycine max]

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 97/168 (57%), Positives = 123/168 (73%), Gaps = 7/168 (4%)

Query: 1   MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDH-FRRCSNERSVATHPIRINGLG 59
           MV ++DLVI+ + VG+ALG+LIA L++FG+RWYKK  H   R +NE S+ T PIR NGL 
Sbjct: 1   MVDQADLVIVCVSVGVALGVLIACLIYFGIRWYKKRAHRLSRSANEPSLTTIPIRTNGLE 60

Query: 60  TSIDFSAPVANSVAVKAS---GFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQK 116
           TSIDFSA + +S+A   S     P K S  +WWS+ +KD F S    SGI +Y+YK+IQK
Sbjct: 61  TSIDFSASLTSSIATSRSPNPHNPHKSSHSTWWSHQNKDGFASV---SGILKYSYKEIQK 117

Query: 117 ATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           ATQNFTN LG+G+FG VYKA MP+G V A+K+L  +S QGEKEFQTEV
Sbjct: 118 ATQNFTNTLGEGSFGTVYKAMMPTGEVVAVKMLGPNSKQGEKEFQTEV 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255640116|gb|ACU20349.1| unknown [Glycine max]

 Score =  184 bits (468), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 94/168 (55%), Positives = 120/168 (71%), Gaps = 7/168 (4%)

Query: 1   MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDH-FRRCSNERSVATHPIRINGLG 59
           MV ++DLVI+ + VG+ALG+LIA L++FG+RWYK   H   R +NE S+ T PIR NGL 
Sbjct: 1   MVDQADLVIVCVSVGVALGVLIACLIYFGIRWYKMRAHRLSRSANEPSLTTIPIRTNGLE 60

Query: 60  TSIDFSAPVANSVAVKAS---GFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQK 116
           TSIDFSA + +S+A   S     P K    +WWS+ +KD F S    SGI +Y+YK+IQK
Sbjct: 61  TSIDFSASLTSSIATSRSPNPHNPHKSPHSTWWSHQNKDGFASV---SGILKYSYKEIQK 117

Query: 117 ATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           ATQNFTN LG+G+FG VYKA MP+G V A+K+L  +S QGEKEFQT V
Sbjct: 118 ATQNFTNTLGEGSFGTVYKAMMPTGEVVAVKMLGPNSKQGEKEFQTGV 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767799|emb|CAN76053.1| hypothetical protein VITISV_019641 [Vitis vinifera]

 Score =  182 bits (463), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/218 (47%), Positives = 124/218 (56%), Gaps = 57/218 (26%)

Query: 1   MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGT 60
           MV+ +DLV IGI  GLA+GILIA+LVF G+RWYKKH H RRC+NER     PIR NGL  
Sbjct: 1   MVNSADLVTIGISAGLAIGILIASLVFCGIRWYKKHSHLRRCANERCSTALPIRTNGLDA 60

Query: 61  SIDFSAPVANSVAVKASGFPQKKSQVSWWSN-HSKDRFTSAPSASGIPRYAYKD------ 113
           SID SA V+NS+A+  S FP K S + WWS+ H KD+     SASGIPRY+Y +      
Sbjct: 61  SIDSSASVSNSIAIPGSEFPAKDSHLFWWSHRHDKDQLA---SASGIPRYSYNNPCNNCT 117

Query: 114 ----------------------------IQKATQNFTNI-------------------LG 126
                                       +  A +N   +                   LG
Sbjct: 118 DEDGNMGINFTLEKWQSLLYRRKPHLLLVLDAEKNLRPLNKCREKGIFKKQHTISQLFLG 177

Query: 127 QGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           QG+FGPVYKATM +GGV A+KVLAS+S QGEKEFQTEV
Sbjct: 178 QGSFGPVYKATMATGGVVAVKVLASNSKQGEKEFQTEV 215

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
TAIR|locus:2143166	436	CRLK2 "calcium/calmodulin-regu	0.952	0.364	0.542	1.7e-41
TAIR|locus:2172149	440	CRLK1 "calcium/calmodulin-regu	0.940	0.356	0.448	1.2e-28
TAIR|locus:2116525	821	SD2-5 "S-domain-2 5" [Arabidop	0.407	0.082	0.5	2.1e-12
TAIR|locus:2046268	633	PERK4 "proline-rich extensin-l	0.335	0.088	0.5	2.5e-11
TAIR|locus:2197709	809	AT1G61480 [Arabidopsis thalian	0.526	0.108	0.363	8e-11
TAIR|locus:2014604	381	AT1G76370 [Arabidopsis thalian	0.688	0.301	0.351	8.6e-11
TAIR|locus:2077147	676	CRK4 "cysteine-rich RLK (RECEP	0.449	0.110	0.412	1.3e-10
TAIR|locus:2091722	652	PERK1 "proline-rich extensin-l	0.335	0.085	0.482	1.4e-10
TAIR|locus:2017923	390	AT1G16670 [Arabidopsis thalian	0.467	0.2	0.409	1.9e-10
UNIPROTKB|Q9ARH1	647	Q9ARH1 "Receptor protein kinas	0.335	0.086	0.482	2.3e-10

TAIR|locus:2143166 CRLK2 "calcium/calmodulin-regulated receptor-like kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 89/164 (54%), Positives = 112/164 (68%)

Query:     1 MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGT 60
             MV++SDLV+IGI VGLALG+L+A L+FF ++WY    H RRC+NE++  T P+     G 
Sbjct:     1 MVNRSDLVVIGISVGLALGLLLALLLFFAIKWYYGRSHLRRCANEQNSPTLPVHTAKRGV 60

Query:    61 SIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQN 120
              I        S     +G P +     WW+NH+KD   SA   SGIPRY YKDIQKATQN
Sbjct:    61 VIPDDRANTESSQPPENGAPTQHQP--WWNNHTKDLTVSA---SGIPRYNYKDIQKATQN 115

Query:   121 FTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
             FT +LGQG+FGPVYKA MP+G +AA KV  S+S QG++EFQTEV
Sbjct:   116 FTTVLGQGSFGPVYKAVMPNGELAAAKVHGSNSSQGDREFQTEV 159

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2172149 CRLK1 "calcium/calmodulin-regulated receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 74/165 (44%), Positives = 103/165 (62%)

Query:     1 MVHKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGT 60
             M  +S  +I+GI +GL +G+++A    F  R+++K        + RS AT PIR NG  +
Sbjct:     1 MEGESKGLIVGISLGLVIGVVLAISALFCFRYHRKKSQIVNSGSRRS-ATIPIRENGADS 59

Query:    61 -SIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQ 119
              +I   + +     VK+S    K  +  W    SK   ++  SASGI  Y+Y+D+QKAT 
Sbjct:    60 CNIMSDSTIGPDSPVKSS----KNGRSVWLEGFSKR--SNVISASGILEYSYRDLQKATC 113

Query:   120 NFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
             NFT ++GQGAFGPVYKA M +G + A+KVLA+DS QGEKEFQTEV
Sbjct:   114 NFTTLIGQGAFGPVYKAQMSTGEIVAVKVLATDSKQGEKEFQTEV 158

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
 Identities = 36/72 (50%), Positives = 47/72 (65%)

Query:    94 KDRFTSAPSASGIP-RYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASD 152
             +D F    + SG+P R+AYKD+Q AT NF+  LGQG FG VY+ T+P G   A+K L   
Sbjct:   469 EDNFLE--NLSGMPIRFAYKDLQSATNNFSVKLGQGGFGSVYEGTLPDGSRLAVKKLEGI 526

Query:   153 SHQGEKEFQTEV 164
               QG+KEF+ EV
Sbjct:   527 G-QGKKEFRAEV 537

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2046268 PERK4 "proline-rich extensin-like receptor kinase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
 Identities = 29/58 (50%), Positives = 39/58 (67%)

Query:   109 YAYKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
             + Y+++  AT  FT  N+LGQG FG V+K  +PSG   A+K L + S QGE+EFQ EV
Sbjct:   272 FTYQELAAATGGFTDANLLGQGGFGYVHKGVLPSGKEVAVKSLKAGSGQGEREFQAEV 329

GO:0004672 "protein kinase activity" evidence=IEA;ISS;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0009845 "seed germination" evidence=IMP

GO:0019722 "calcium-mediated signaling" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2197709 AT1G61480 [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
 Identities = 36/99 (36%), Positives = 53/99 (53%)

Query:    68 VANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFT--NIL 125
             V ++V+ K S    K++    W+N  + +       SG+  +    IQ AT NF+  N L
Sbjct:   452 VKHTVSAKISKIASKEA----WNNDLEPQ-----DVSGLKFFEMNTIQTATDNFSLSNKL 502

Query:   126 GQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
             GQG FG VYK  +  G   A+K L+S S QG++EF  E+
Sbjct:   503 GQGGFGSVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEI 541

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2014604 AT1G76370 [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 8.6e-11, P = 8.6e-11
 Identities = 45/128 (35%), Positives = 65/128 (50%)

Query:    41 RCSNERSVATHPIRINGLGTSIDFS--APVANSVAVKASGFPQKKSQVSWWSNHSKDRFT 98
             RC +  +  T+ +RIN + T  D +  A VA  +  + +G    KS +         +  
Sbjct:     2 RCFSCLNTQTNDMRIN-IDTLSDLTDYASVATKIDPRGTG---SKSGIL-----VNGKVN 52

Query:    99 SAPSASGIPRYAYKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQG 156
             S     G   + +K++  AT+NF   NI+G+G FG VYK  + SG V AIK L  D HQG
Sbjct:    53 SPKPGGGARSFTFKELAAATKNFREGNIIGKGGFGSVYKGRLDSGQVVAIKQLNPDGHQG 112

Query:   157 EKEFQTEV 164
              +EF  EV
Sbjct:   113 NQEFIVEV 120

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2077147 CRK4 "cysteine-rich RLK (RECEPTOR-like protein kinase) 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
 Identities = 33/80 (41%), Positives = 46/80 (57%)

Query:    90 SNHSKDRFTSAP---SASGIPRYAYKDIQKATQNF--TNILGQGAFGPVYKATMPSGGVA 144
             +N+ ++  T      + +G  ++ +K I+ AT  F  TN LGQG FG VYK   PSG   
Sbjct:   317 TNYEREPLTEESDDITTAGSLQFDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQV 376

Query:   145 AIKVLASDSHQGEKEFQTEV 164
             A+K L+  S QGE+EF  EV
Sbjct:   377 AVKRLSKTSGQGEREFANEV 396

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006952 "defense response" evidence=TAS

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0012501 "programmed cell death" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IEP

TAIR|locus:2091722 PERK1 "proline-rich extensin-like receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
 Identities = 28/58 (48%), Positives = 40/58 (68%)

Query:   109 YAYKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
             + Y+++ +AT  F+  N+LGQG FG V+K  +PSG   A+K L + S QGE+EFQ EV
Sbjct:   268 FTYEELSRATNGFSEANLLGQGGFGYVHKGILPSGKEVAVKQLKAGSGQGEREFQAEV 325

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;ISS;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009611 "response to wounding" evidence=ISS

GO:0009620 "response to fungus" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

GO:0052541 "plant-type cell wall cellulose metabolic process" evidence=RCA

GO:0052546 "cell wall pectin metabolic process" evidence=RCA

TAIR|locus:2017923 AT1G16670 [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 34/83 (40%), Positives = 51/83 (61%)

Query:    87 SWWSNHSKDRFTSAPSASGIPR---YAYKDIQKATQNFT--NILGQGAFGPVYKATMPSG 141
             SW S H ++        + I     Y Y++I++AT +F+  N +G+G FG VYK  +  G
Sbjct:     4 SWLSCHRREATEVDGEIAAIDNVKIYKYREIRQATDDFSAENKIGEGGFGSVYKGCLKDG 63

Query:   142 GVAAIKVLASDSHQGEKEFQTEV 164
              +AAIKVL+++S QG KEF TE+
Sbjct:    64 KLAAIKVLSAESRQGVKEFLTEI 86

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

UNIPROTKB|Q9ARH1 Q9ARH1 "Receptor protein kinase PERK1" [Brassica napus (taxid:3708)]

 Score = 140 (54.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
 Identities = 28/58 (48%), Positives = 39/58 (67%)

Query:   109 YAYKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
             + Y+++ +AT  F+  N+LGQG FG V+K  +PSG   A+K L   S QGE+EFQ EV
Sbjct:   263 FTYEELARATNGFSEANLLGQGGFGYVHKGVLPSGKEVAVKQLKVGSGQGEREFQAEV 320

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	167
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	0.001
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	0.003
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.003

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 41.8 bits (99), Expect = 5e-05
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)

Query: 123 NILGQGAFGPVYKATMPSGG----VAAIKVL-ASDSHQGEKEFQTEVR 165
             LG+GAFG VYK  +          A+K L    S +  K+F  E R
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEAR 48

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 124 ILGQGAFGPVYKAT-MPSGGVAAIKVLA--SDSHQGEKEFQ 161
            LG+G++G VYKA    +G V AIKV+    D  +  KE  
Sbjct: 10  KLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEIS 50

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 39.1 bits (92), Expect = 5e-04
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 121 FTNILGQGAFGPVYKAT--MPSGGV---AAIKVLASDSH-QGEKEFQTEVR 165
               LG+GAFG VYK T      G     A+K L  D+  Q  +EF  E R
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREAR 53

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 38.7 bits (91), Expect = 5e-04
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 6/51 (11%)

Query: 121 FTNILGQGAFGPVYKAT--MPSGGV---AAIKVLASDSH-QGEKEFQTEVR 165
               LG+GAFG VYK       G      A+K L  D+  Q  +EF  E R
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREAR 53

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 37.9 bits (89), Expect = 0.001
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 6/51 (11%)

Query: 121 FTNILGQGAFGPVYKATM-PSGGVA----AIKVL-ASDSHQGEKEFQTEVR 165
               LG+GAFG VYK T+   G       A+K L    S +  +EF  E  
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEAS 53

Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)

Query: 123 NILGQGAFGPVYKATMP-SGGVAAIKV--LASDSHQGEKEFQTEVR 165
            +LG+G+FG VY A    +G + A+K   L+ DS +  +  + E+R
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIR 51

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRA 166
           LG G FG V++    +    AIK+L SD    +++FQ EV+A
Sbjct: 14  LGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQA 55

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	167
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.08
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	98.88
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.79
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	98.62
KOG3653	534	consensus Transforming growth factor beta/activin	98.56
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	98.44
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	98.35
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.09
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	98.05
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	98.02
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	97.75
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	97.53
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	97.44
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	97.39
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	97.25
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	97.2
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.2
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	97.19
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	97.14
KOG0192	362	consensus Tyrosine kinase specific for activated (	97.12
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	97.09
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	97.06
KOG0595	429	consensus Serine/threonine-protein kinase involved	96.99
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	96.97
PLN00034	353	mitogen-activated protein kinase kinase; Provision	96.82
PHA02988	283	hypothetical protein; Provisional	96.71
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	96.64
KOG0575	592	consensus Polo-like serine/threonine protein kinas	96.64
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	96.61
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	96.61
PTZ00284	467	protein kinase; Provisional	96.39
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	96.38
PRK09188	365	serine/threonine protein kinase; Provisional	96.3
PF13908	179	Shisa: Wnt and FGF inhibitory regulator	96.25
PF15102	146	TMEM154: TMEM154 protein family	96.19
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	96.18
KOG0201	467	consensus Serine/threonine protein kinase [Signal	96.16
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	96.07
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	96.03
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	95.97
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	95.96
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	95.94
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	95.92
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	95.92
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	95.92
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	95.92
KOG0581	364	consensus Mitogen-activated protein kinase kinase	95.82
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	95.81
PF05393	94	Hum_adeno_E3A: Human adenovirus early E3A glycopro	95.81
PF10577	807	UPF0560: Uncharacterised protein family UPF0560; I	95.76
PF07213	79	DAP10: DAP10 membrane protein; InterPro: IPR009861	95.76
PF12877	684	DUF3827: Domain of unknown function (DUF3827); Int	95.74
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	95.51
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	95.51
PF04689	69	S1FA: DNA binding protein S1FA; InterPro: IPR00677	95.51
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	95.44
PTZ00283	496	serine/threonine protein kinase; Provisional	95.42
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	95.39
PF08374	221	Protocadherin: Protocadherin; InterPro: IPR013585	95.38
KOG0694	694	consensus Serine/threonine protein kinase [Signal	95.36
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	95.34
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	95.33
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	95.33
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	95.32
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	95.31
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	95.29
PF10873	155	DUF2668: Protein of unknown function (DUF2668); In	95.28
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	95.26
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	95.25
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	95.21
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	95.2
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	95.2
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	95.17
PF14575	75	EphA2_TM: Ephrin type-A receptor 2 transmembrane d	95.17
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	95.16
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	95.14
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	95.14
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	95.07
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	95.06
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	95.03
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	95.01
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	94.99
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	94.92
KOG0577	948	consensus Serine/threonine protein kinase [Signal	94.83
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	94.72
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	94.67
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	94.66
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	94.6
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	94.53
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	94.45
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	94.44
PTZ00263	329	protein kinase A catalytic subunit; Provisional	94.42
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	94.39
KOG0607	463	consensus MAP kinase-interacting kinase and relate	94.33
KOG0198	313	consensus MEKK and related serine/threonine protei	94.28
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	94.24
smart00090	237	RIO RIO-like kinase.	94.21
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	94.21
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	94.19
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	94.17
PF14991	118	MLANA: Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P	94.06
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	94.04
PTZ00036	440	glycogen synthase kinase; Provisional	94.03
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	93.96
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	93.95
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	93.94
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	93.93
PF13908	179	Shisa: Wnt and FGF inhibitory regulator	93.9
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	93.9
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	93.89
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	93.85
KOG1989	738	consensus ARK protein kinase family [Signal transd	93.84
PF02480	439	Herpes_gE: Alphaherpesvirus glycoprotein E; InterP	93.79
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	93.72
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	93.7
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	93.69
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	93.67
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	93.66
PTZ00024	335	cyclin-dependent protein kinase; Provisional	93.65
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	93.62
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	93.6
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	93.57
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	93.54
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	93.5
PF05454	290	DAG1: Dystroglycan (Dystrophin-associated glycopro	93.44
PF06365	202	CD34_antigen: CD34/Podocalyxin family; InterPro: I	93.4
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	93.39
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	93.38
KOG1027	903	consensus Serine/threonine protein kinase and endo	93.36
KOG0661	538	consensus MAPK related serine/threonine protein ki	93.34
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	93.33
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	93.32
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	93.25
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	93.24
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	93.23
PHA03265	402	envelope glycoprotein D; Provisional	93.22
PF15050	133	SCIMP: SCIMP protein	93.18
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	93.17
COG0661	517	AarF Predicted unusual protein kinase [General fun	93.12
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	93.11
KOG0605	550	consensus NDR and related serine/threonine kinases	93.09
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	93.07
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	93.06
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	93.05
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	92.99
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	92.88
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	92.76
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	92.75
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	92.54
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	92.5
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	92.45
PF05568	189	ASFV_J13L: African swine fever virus J13L protein;	92.44
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	92.44
PF15069	143	FAM163: FAM163 family	92.43
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	92.41
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	92.34
PF15102	146	TMEM154: TMEM154 protein family	92.2
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	92.19
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	92.18
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	91.84
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	91.83
PF07204	98	Orthoreo_P10: Orthoreovirus membrane fusion protei	91.63
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	91.56
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	91.56
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	91.47
PHA02882	294	putative serine/threonine kinase; Provisional	91.31
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	91.18
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	91.13
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	91.12
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	91.06
PF14851	153	FAM176: FAM176 family	90.82
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	90.67
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	90.67
PF12191	129	stn_TNFRSF12A: Tumour necrosis factor receptor stn	90.25
PF15069	143	FAM163: FAM163 family	90.01
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	89.58
PHA03209	357	serine/threonine kinase US3; Provisional	89.44
KOG0583	370	consensus Serine/threonine protein kinase [Signal	89.39
PTZ00266	1021	NIMA-related protein kinase; Provisional	89.07
PF04971	68	Lysis_S: Lysis protein S ; InterPro: IPR007054 The	88.9
KOG0582	516	consensus Ste20-like serine/threonine protein kina	88.89
PTZ00267	478	NIMA-related protein kinase; Provisional	88.53
PHA03212	391	serine/threonine kinase US3; Provisional	88.46
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	88.37
PHA03211	461	serine/threonine kinase US3; Provisional	87.94
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	87.86
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	87.86
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	87.42
PRK09605	535	bifunctional UGMP family protein/serine/threonine	87.23
KOG4721	904	consensus Serine/threonine protein kinase, contain	86.89
KOG1235	538	consensus Predicted unusual protein kinase [Genera	86.8
PF00558	81	Vpu: Vpu protein; InterPro: IPR008187 The Human im	86.77
PF06809	341	NPDC1: Neural proliferation differentiation contro	86.59
PF12768	281	Rax2: Cortical protein marker for cell polarity	86.5
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	86.34
PF03229	126	Alpha_GJ: Alphavirus glycoprotein J; InterPro: IPR	85.73
PF15347	428	PAG: Phosphoprotein associated with glycosphingoli	85.68
PF14575	75	EphA2_TM: Ephrin type-A receptor 2 transmembrane d	85.59
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	85.55
PHA03207	392	serine/threonine kinase US3; Provisional	85.48
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	85.07
PF06697	278	DUF1191: Protein of unknown function (DUF1191); In	84.99
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	84.65
PLN03150	623	hypothetical protein; Provisional	84.63
KOG0598	357	consensus Ribosomal protein S6 kinase and related	84.59
PF08114	43	PMP1_2: ATPase proteolipid family; InterPro: IPR01	84.49
KOG1167	418	consensus Serine/threonine protein kinase of the C	84.24
KOG4258	1025	consensus Insulin/growth factor receptor (contains	84.15
KOG0611	668	consensus Predicted serine/threonine protein kinas	84.12
PF03597	45	CcoS: Cytochrome oxidase maturation protein cbb3-t	83.57
PF02038	50	ATP1G1_PLM_MAT8: ATP1G1/PLM/MAT8 family; InterPro:	83.21
PF15176	102	LRR19-TM: Leucine-rich repeat family 19 TM domain	82.61
PF15330	107	SIT: SHP2-interacting transmembrane adaptor protei	82.55
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	81.97
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	81.65
TIGR00847	51	ccoS cytochrome oxidase maturation protein, cbb3-t	81.39
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	81.31
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	81.09
KOG0696	683	consensus Serine/threonine protein kinase [Signal	80.94
PHA03210	501	serine/threonine kinase US3; Provisional	80.84
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	80.54
KOG0610	459	consensus Putative serine/threonine protein kinase	80.42
PF05454	290	DAG1: Dystroglycan (Dystrophin-associated glycopro	80.03

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.08  E-value=2.6e-10  Score=89.33  Aligned_cols=62  Identities=45%  Similarity=0.846  Sum_probs=53.6

Q ss_pred             CCCccCHHHHHHHhhhhh--hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          105 GIPRYAYKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       105 ~~~~~~~~~l~~~~~~f~--~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ....|++.+|..+|++|+  +.||+|+||.||+|.+++|..||||+++....+...+|..|+++
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~  124 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEI  124 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHH
Confidence            456799999999999998  89999999999999999999999999977543315679999864

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=98.88  E-value=4.9e-08  Score=79.19  Aligned_cols=57  Identities=23%  Similarity=0.454  Sum_probs=44.5

Q ss_pred             CHHHHHHHhhhhhhhccccccccEEEEEcCCCcEEEEEEeccCCcc-cHHHHHHHHhh
Q 031038          110 AYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQ-GEKEFQTEVRA  166 (167)
Q Consensus       110 ~~~~l~~~~~~f~~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~-~~~~F~~e~~~  166 (167)
                      .+.|..+...-|...||+|.||+|..-+.+++..||||+|+..... ..++|..|+++
T Consensus       531 al~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIki  588 (807)
T KOG1094|consen  531 ALVEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKI  588 (807)
T ss_pred             chhhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHH
Confidence            3444444444556799999999999999988899999999876544 45899999864

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.79  E-value=1.3e-08  Score=79.91  Aligned_cols=39  Identities=31%  Similarity=0.648  Sum_probs=30.3

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|.||+||+|.| -|..||||.+....   +..|.+|.|
T Consensus       217 e~IGkGRyGEVwrG~w-rGe~VAVKiF~srd---E~SWfrEtE  255 (513)
T KOG2052|consen  217 EIIGKGRFGEVWRGRW-RGEDVAVKIFSSRD---ERSWFRETE  255 (513)
T ss_pred             EEecCccccceeeccc-cCCceEEEEecccc---hhhhhhHHH
Confidence            5899999999999999 56899999996542   345555544

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=98.62  E-value=7e-08  Score=80.46  Aligned_cols=43  Identities=26%  Similarity=0.490  Sum_probs=34.7

Q ss_pred             hhccccccccEEEEEcC--C--CcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP--S--GGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~--~--g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      .+||.|.||+||+|.|.  +  ...||+|.|+... ..+..+|+.|.-
T Consensus       635 ~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAs  682 (996)
T KOG0196|consen  635 KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEAS  682 (996)
T ss_pred             EEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhh
Confidence            68999999999999992  2  3479999998755 445689999874

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.56  E-value=2.1e-07  Score=73.73  Aligned_cols=37  Identities=32%  Similarity=0.723  Sum_probs=28.9

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHH
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTE  163 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e  163 (167)
                      .++|+|.||.||||.|.+ +.||||.+....   ...|..|
T Consensus       216 eli~~Grfg~V~KaqL~~-~~VAVKifp~~~---kqs~~~E  252 (534)
T KOG3653|consen  216 ELIGRGRFGCVWKAQLDN-RLVAVKIFPEQE---KQSFQNE  252 (534)
T ss_pred             HHhhcCccceeehhhccC-ceeEEEecCHHH---HHHHHhH
Confidence            389999999999999955 899999995442   3345544

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.44  E-value=1.5e-07  Score=78.65  Aligned_cols=56  Identities=29%  Similarity=0.496  Sum_probs=42.9

Q ss_pred             CCccCHHHHHHHhhhhhhhccccccccEEEEEcCC------CcEEEEEEeccCCcc-cHHHHHHHHhh
Q 031038          106 IPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPS------GGVAAIKVLASDSHQ-GEKEFQTEVRA  166 (167)
Q Consensus       106 ~~~~~~~~l~~~~~~f~~~lg~g~~g~vy~g~l~~------g~~vavk~l~~~~~~-~~~~F~~e~~~  166 (167)
                      ..+++..+++     |...||+|.||+||+|.+.+      .+.||||.|+..... ...+|.+|++.
T Consensus       480 ~~~i~r~~i~-----~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeL  542 (774)
T KOG1026|consen  480 VLEIPRSDIV-----FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAEL  542 (774)
T ss_pred             eeEechhhee-----ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHH
Confidence            3456666663     44589999999999998833      457999999876655 67899999864

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=98.35  E-value=6.2e-07  Score=75.51  Aligned_cols=42  Identities=45%  Similarity=0.698  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEc-CCCc----EEEEEEecc-CCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGG----VAAIKVLAS-DSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~----~vavk~l~~-~~~~~~~~F~~e~  164 (167)
                      .+||.|+||+||+|.+ +.|.    .||+|.+.. ...+...+|++|+
T Consensus       702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeA  749 (1177)
T KOG1025|consen  702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEA  749 (1177)
T ss_pred             ceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHH
Confidence            3899999999999998 5554    689999955 4355567888876

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.09  E-value=2.2e-05  Score=68.82  Aligned_cols=43  Identities=21%  Similarity=0.301  Sum_probs=31.6

Q ss_pred             cCHHHHHHHhhhhhhhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          109 YAYKDIQKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       109 ~~~~~l~~~~~~f~~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ++++++.... ...++||+|+||.||+|.. .+|..||||.++..
T Consensus       683 ~~~~~~~~~~-~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~  726 (968)
T PLN00113        683 ITINDILSSL-KEENVISRGKKGASYKGKSIKNGMQFVVKEINDV  726 (968)
T ss_pred             hhHHHHHhhC-CcccEEccCCCeeEEEEEECCCCcEEEEEEccCC
Confidence            4455554332 1226899999999999997 57889999999654

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=98.05  E-value=3.2e-06  Score=55.76  Aligned_cols=36  Identities=22%  Similarity=0.232  Sum_probs=25.5

Q ss_pred             cCCcceeehhhHHHHHHHHHHHHHHHhhhheecccC
Q 031038            3 HKSDLVIIGICVGLALGILIATLVFFGLRWYKKHDH   38 (167)
Q Consensus         3 ~~s~~~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~~   38 (167)
                      +++...|++|++|+++++++++++++|++||++||.
T Consensus        60 ~fs~~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk~   95 (122)
T PF01102_consen   60 RFSEPAIIGIIFGVMAGVIGIILLISYCIRRLRKKS   95 (122)
T ss_dssp             SSS-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS---
T ss_pred             CccccceeehhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            477888999999999998887776666666655554

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=98.02  E-value=3.3e-05  Score=63.22  Aligned_cols=41  Identities=32%  Similarity=0.580  Sum_probs=33.4

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||.|.||+||+|.|-+  .||||.|+-..  ....+.|..|+.
T Consensus       398 ~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa  440 (678)
T KOG0193|consen  398 ERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVA  440 (678)
T ss_pred             ceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHH
Confidence            489999999999999964  69999996543  344588999985

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=97.75  E-value=4.6e-05  Score=39.17  Aligned_cols=30  Identities=33%  Similarity=0.534  Sum_probs=18.6

Q ss_pred             eeehhhHHHHHHHHHHHHHHHhh-hheeccc
Q 031038            8 VIIGICVGLALGILIATLVFFGL-RWYKKHD   37 (167)
Q Consensus         8 ~ii~ii~g~~~~v~~i~~~~~~~-~~~r~~~   37 (167)
                      ..++|++|++++++++++.++++ |+|||.+
T Consensus         4 s~IaIIv~V~vg~~iiii~~~~YaCcykk~~   34 (38)
T PF02439_consen    4 STIAIIVAVVVGMAIIIICMFYYACCYKKHR   34 (38)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence            35677888887776666655554 4555444

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=97.53  E-value=3.3e-05  Score=52.47  Aligned_cols=33  Identities=21%  Similarity=0.400  Sum_probs=22.1

Q ss_pred             cceeehhhHHHHHHHHHHHHHHHhhhheecccC
Q 031038            6 DLVIIGICVGLALGILIATLVFFGLRWYKKHDH   38 (167)
Q Consensus         6 ~~~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~~   38 (167)
                      ..++||+++|+.+.++++++++++++|+|++|.
T Consensus        48 knIVIGvVVGVGg~ill~il~lvf~~c~r~kkt   80 (154)
T PF04478_consen   48 KNIVIGVVVGVGGPILLGILALVFIFCIRRKKT   80 (154)
T ss_pred             ccEEEEEEecccHHHHHHHHHhheeEEEecccC
Confidence            468899999988777666555555555554443

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=97.44  E-value=0.00022  Score=56.05  Aligned_cols=42  Identities=17%  Similarity=0.307  Sum_probs=28.2

Q ss_pred             hhccccccccEEEEEcC------CCcEEEEEEeccCC-cccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATMP------SGGVAAIKVLASDS-HQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~-~~~~~~F~~e~  164 (167)
                      .++-||.||.||+|.|.      +.+.|-||.++... ..+..-|++|.
T Consensus       290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es  338 (563)
T KOG1024|consen  290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQES  338 (563)
T ss_pred             hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHH
Confidence            78899999999999663      33456777775433 33345565553

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=97.39  E-value=0.00024  Score=61.95  Aligned_cols=46  Identities=37%  Similarity=0.580  Sum_probs=35.5

Q ss_pred             hhhhhccccccccEEEEEcC--CCc----EEEEEEeccCC-cccHHHHHHHHh
Q 031038          120 NFTNILGQGAFGPVYKATMP--SGG----VAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       120 ~f~~~lg~g~~g~vy~g~l~--~g~----~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      .+.+.||+|+||.||+|++.  +|.    .||||+|+... .+...+|+.|.-
T Consensus       695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~  747 (1025)
T KOG1095|consen  695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEAL  747 (1025)
T ss_pred             EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHH
Confidence            45569999999999999993  232    48999997654 455689999863

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=97.25  E-value=0.00031  Score=56.45  Aligned_cols=46  Identities=22%  Similarity=0.387  Sum_probs=37.4

Q ss_pred             hhhhhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          120 NFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       120 ~f~~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      .+.+.||+|.||.||.|.+++...||+|.++.. ....++|.+|+.+
T Consensus       209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~i  254 (468)
T KOG0197|consen  209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQI  254 (468)
T ss_pred             HHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHH
Confidence            445689999999999999977779999999765 3446789988753

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=97.20  E-value=0.0004  Score=52.11  Aligned_cols=59  Identities=27%  Similarity=0.448  Sum_probs=44.6

Q ss_pred             CCCCCccCHHHHHHHhhhhhhhccccccccEEEEEc-CCCcEEEEEEeccCCc-ccHHHHHHHHhh
Q 031038          103 ASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSH-QGEKEFQTEVRA  166 (167)
Q Consensus       103 ~~~~~~~~~~~l~~~~~~f~~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~-~~~~~F~~e~~~  166 (167)
                      ......|+.++|+...     .||.|.||.|+|-.. +.|...|||+++.... .....|+.|.++
T Consensus        55 ~~~~~~F~~~~Lqdlg-----~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~  115 (361)
T KOG1006|consen   55 DAHLHTFTSDNLQDLG-----EIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDT  115 (361)
T ss_pred             cccccccccchHHHHH-----HhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHH
Confidence            3344567777777655     899999999999888 6789999999977554 445677777654

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.20  E-value=0.00042  Score=56.84  Aligned_cols=44  Identities=20%  Similarity=0.399  Sum_probs=31.4

Q ss_pred             hhhh--hhccccccccEEEEEc-----------------CCCcEEEEEEeccCCcccHHHHHH
Q 031038          119 QNFT--NILGQGAFGPVYKATM-----------------PSGGVAAIKVLASDSHQGEKEFQT  162 (167)
Q Consensus       119 ~~f~--~~lg~g~~g~vy~g~l-----------------~~g~~vavk~l~~~~~~~~~~F~~  162 (167)
                      .+|.  +.||+|+||.||+|.+                 .++..||||+++.......++|..
T Consensus       145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~  207 (507)
T PLN03224        145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLK  207 (507)
T ss_pred             cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHh
Confidence            4554  7999999999999975                 235679999996544333445544

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=97.19  E-value=0.00013  Score=38.20  Aligned_cols=30  Identities=33%  Similarity=0.617  Sum_probs=12.0

Q ss_pred             CcceeehhhHHHHHHHHHHHHHHHhhhhee
Q 031038            5 SDLVIIGICVGLALGILIATLVFFGLRWYK   34 (167)
Q Consensus         5 s~~~ii~ii~g~~~~v~~i~~~~~~~~~~r   34 (167)
                      +....+++.+++-+++++++++++++.+||
T Consensus         8 ~~~vaIa~~VvVPV~vI~~vl~~~l~~~~r   37 (40)
T PF08693_consen    8 SNTVAIAVGVVVPVGVIIIVLGAFLFFWYR   37 (40)
T ss_pred             CceEEEEEEEEechHHHHHHHHHHhheEEe
Confidence            333333333333344444444444443333

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=97.14  E-value=0.00022  Score=45.34  Aligned_cols=29  Identities=17%  Similarity=-0.069  Sum_probs=18.9

Q ss_pred             CcCCcceeehhhHHHHHHHHHHHHHHHhh
Q 031038            2 VHKSDLVIIGICVGLALGILIATLVFFGL   30 (167)
Q Consensus         2 ~~~s~~~ii~ii~g~~~~v~~i~~~~~~~   30 (167)
                      .+++++.|+||.+|+++++.+++.++++|
T Consensus        61 ~~ls~gaiagi~vg~~~~v~~lv~~l~w~   89 (96)
T PTZ00382         61 SGLSTGAIAGISVAVVAVVGGLVGFLCWW   89 (96)
T ss_pred             CCcccccEEEEEeehhhHHHHHHHHHhhe
Confidence            35678899999998776554443333333

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=97.12  E-value=0.0011  Score=52.17  Aligned_cols=42  Identities=33%  Similarity=0.669  Sum_probs=32.7

Q ss_pred             hhccccccccEEEEEcCCCcE-EEEEEeccCCccc--HHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGV-AAIKVLASDSHQG--EKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~-vavk~l~~~~~~~--~~~F~~e~~  165 (167)
                      +.+|.|.||.||+|.+. |.. ||||.+.......  .++|.+|+.
T Consensus        47 ~~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~~~~f~~E~~   91 (362)
T KOG0192|consen   47 EVLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDESRKAFRREAS   91 (362)
T ss_pred             hhcccCCceeEEEEEeC-CceeEEEEEecchhcChHHHHHHHHHHH
Confidence            36999999999999995 455 9999996543222  468999875

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=97.09  E-value=0.0014  Score=55.15  Aligned_cols=52  Identities=35%  Similarity=0.498  Sum_probs=38.9

Q ss_pred             cCHHHHHHHhhhhhhhccccccccEEEEEc--CCCc--EEEEEEeccCCcc-cHHHHHHHHh
Q 031038          109 YAYKDIQKATQNFTNILGQGAFGPVYKATM--PSGG--VAAIKVLASDSHQ-GEKEFQTEVR  165 (167)
Q Consensus       109 ~~~~~l~~~~~~f~~~lg~g~~g~vy~g~l--~~g~--~vavk~l~~~~~~-~~~~F~~e~~  165 (167)
                      +..++|....     +||+|.||.|++|.|  ++|.  .||||+|+..... ...+|++|+.
T Consensus       107 Ipee~i~l~e-----~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas  163 (1039)
T KOG0199|consen  107 IPEEQIKLYE-----LLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREAS  163 (1039)
T ss_pred             ccHHHHHHHH-----HhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHH
Confidence            4555554333     899999999999999  4555  5799999876544 4588999874

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=97.06  E-value=0.00075  Score=54.67  Aligned_cols=44  Identities=39%  Similarity=0.608  Sum_probs=33.9

Q ss_pred             hhccccccccEEEEEcC--CC--cE-EEEEEecc---CCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP--SG--GV-AAIKVLAS---DSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~--~g--~~-vavk~l~~---~~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.+.  ++  .. ||||..+.   ..+....+|++|.++
T Consensus       163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArv  214 (474)
T KOG0194|consen  163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARV  214 (474)
T ss_pred             ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHH
Confidence            58999999999999993  33  23 89999975   334556899999864

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=96.99  E-value=0.00094  Score=52.51  Aligned_cols=42  Identities=31%  Similarity=0.483  Sum_probs=31.7

Q ss_pred             hccccccccEEEEEc-CCCcEEEEEEeccC--CcccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATM-PSGGVAAIKVLASD--SHQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l-~~g~~vavk~l~~~--~~~~~~~F~~e~~  165 (167)
                      .||+|.|+.||+|.. ..+..||||.+...  .+...+....|+.
T Consensus        17 ~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~   61 (429)
T KOG0595|consen   17 EIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIK   61 (429)
T ss_pred             hccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHH
Confidence            699999999999999 46789999999543  3444455555554

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=96.97  E-value=0.00086  Score=49.85  Aligned_cols=44  Identities=25%  Similarity=0.378  Sum_probs=34.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|.||.||+|.. .++..|++|.+........+.|.+|+++
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~   58 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIAL   58 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHH
Confidence            6899999999999986 4677899999865544445677777643

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=96.82  E-value=0.027  Score=43.86  Aligned_cols=43  Identities=33%  Similarity=0.548  Sum_probs=32.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      +.||+|.||.||++.. .+|..||+|.+..... .....|.+|++
T Consensus        80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~  124 (353)
T PLN00034         80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIE  124 (353)
T ss_pred             hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHH
Confidence            4899999999999987 4688999999954322 22356777765

>PHA02988 hypothetical protein; Provisional

Probab=96.71  E-value=0.0021  Score=48.55  Aligned_cols=57  Identities=16%  Similarity=0.203  Sum_probs=40.7

Q ss_pred             CCCccCHHHHHHHhhhhhhhccccccccEEEEEcCCCcEEEEEEeccCCccc---HHHHHHHHh
Q 031038          105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQG---EKEFQTEVR  165 (167)
Q Consensus       105 ~~~~~~~~~l~~~~~~f~~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~---~~~F~~e~~  165 (167)
                      +...++.+++...+.   ..+++|+++.||+|.+ +|..||||.++......   .+.|.+|+.
T Consensus        11 ~~~~i~~~~i~~~~~---~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~   70 (283)
T PHA02988         11 DIKCIESDDIDKYTS---VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIK   70 (283)
T ss_pred             cceecCHHHcCCCCC---eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHH
Confidence            445667777743322   3889999999999999 67899999996543322   356777764

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=96.64  E-value=0.0025  Score=49.42  Aligned_cols=34  Identities=32%  Similarity=0.576  Sum_probs=27.7

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCccc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQG  156 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~  156 (167)
                      +++|.|.||.||+|.+. .+..||||+.-.+.+..
T Consensus        30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k   64 (364)
T KOG0658|consen   30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK   64 (364)
T ss_pred             EEEeecccceEEEEEEcCCCceeEEEEecCCCCcC
Confidence            48999999999999994 46899999986554443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.64  E-value=0.0029  Score=52.00  Aligned_cols=45  Identities=29%  Similarity=0.547  Sum_probs=37.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc---CCcccHHHHHHHHhhC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS---DSHQGEKEFQTEVRAH  167 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~---~~~~~~~~F~~e~~~~  167 (167)
                      ++||+|+|+.||.++- ..|..+|+|.+..   ......+...+||++|
T Consensus        24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIH   72 (592)
T KOG0575|consen   24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIH   72 (592)
T ss_pred             eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHH
Confidence            5899999999999987 8899999999954   2234457788999886

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=96.61  E-value=0.0025  Score=32.85  Aligned_cols=32  Identities=16%  Similarity=0.241  Sum_probs=27.4

Q ss_pred             cceeehhhHHHHHHHHHHHHHHHhhhheeccc
Q 031038            6 DLVIIGICVGLALGILIATLVFFGLRWYKKHD   37 (167)
Q Consensus         6 ~~~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~   37 (167)
                      .++++++++|.+++++.++.-.+|+++.++.+
T Consensus         6 IaIIv~V~vg~~iiii~~~~YaCcykk~~~~k   37 (38)
T PF02439_consen    6 IAIIVAVVVGMAIIIICMFYYACCYKKHRRQK   37 (38)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHccccccc
Confidence            46788999999999999999999999888655

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=96.61  E-value=0.00064  Score=39.32  Aligned_cols=33  Identities=21%  Similarity=0.368  Sum_probs=0.4

Q ss_pred             cceeehhhHHHHHHHHHHHHHHHhhhheecccC
Q 031038            6 DLVIIGICVGLALGILIATLVFFGLRWYKKHDH   38 (167)
Q Consensus         6 ~~~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~~   38 (167)
                      +.+++++|+|+++++++++++++++..|.|+|.
T Consensus         8 ~~vlaavIaG~Vvgll~ailLIlf~iyR~rkkd   40 (64)
T PF01034_consen    8 SEVLAAVIAGGVVGLLFAILLILFLIYRMRKKD   40 (64)
T ss_dssp             -----------------------------S---
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            445677777777766655544444443433433

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>PTZ00284 protein kinase; Provisional

Probab=96.39  E-value=0.019  Score=46.59  Aligned_cols=35  Identities=34%  Similarity=0.571  Sum_probs=28.1

Q ss_pred             Hhhhhh--hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          117 ATQNFT--NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       117 ~~~~f~--~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      .+..|.  ..||+|+||.||++.. ..+..||||.++.
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~  164 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRN  164 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEec
Confidence            344554  6899999999999987 4577899999964

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.38  E-value=0.0034  Score=46.43  Aligned_cols=54  Identities=31%  Similarity=0.427  Sum_probs=36.5

Q ss_pred             ccCHHHHHHHhhhhhhhccccccccEEEEEcC-CCcEEEEEEecc---CCcccHHHHHHHHhh
Q 031038          108 RYAYKDIQKATQNFTNILGQGAFGPVYKATMP-SGGVAAIKVLAS---DSHQGEKEFQTEVRA  166 (167)
Q Consensus       108 ~~~~~~l~~~~~~f~~~lg~g~~g~vy~g~l~-~g~~vavk~l~~---~~~~~~~~F~~e~~~  166 (167)
                      .++++++     +....||+|.||.||.|... ++-.||+|.+..   ...+-...+.+||++
T Consensus        18 ~~~l~df-----eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEI   75 (281)
T KOG0580|consen   18 TWTLDDF-----EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEI   75 (281)
T ss_pred             ccchhhc-----cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEe
Confidence            4555554     22368999999999999994 567899999832   112224567777654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=96.30  E-value=0.0065  Score=47.95  Aligned_cols=44  Identities=20%  Similarity=0.308  Sum_probs=31.8

Q ss_pred             hhccccccccEEEEEcC--CCcEEEEEEeccC-----CcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP--SGGVAAIKVLASD-----SHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~--~g~~vavk~l~~~-----~~~~~~~F~~e~~~  166 (167)
                      ..||+|.||.||+|...  ++..+|||++...     .......|.+|+++
T Consensus        24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~i   74 (365)
T PRK09188         24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRA   74 (365)
T ss_pred             cEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHH
Confidence            58999999999999873  5777899987532     11124557777754

>PF13908 Shisa: Wnt and FGF inhibitory regulator

Probab=96.25  E-value=0.014  Score=41.47  Aligned_cols=13  Identities=23%  Similarity=0.419  Sum_probs=6.2

Q ss_pred             ceeehhhHHHHHH
Q 031038            7 LVIIGICVGLALG   19 (167)
Q Consensus         7 ~~ii~ii~g~~~~   19 (167)
                      +++++|+++++++
T Consensus        79 ~iivgvi~~Vi~I   91 (179)
T PF13908_consen   79 GIIVGVICGVIAI   91 (179)
T ss_pred             eeeeehhhHHHHH
Confidence            3455555554443

>PF15102 TMEM154: TMEM154 protein family

Probab=96.19  E-value=0.0085  Score=40.67  Aligned_cols=14  Identities=7%  Similarity=0.297  Sum_probs=7.6

Q ss_pred             CCCCCccCHHHHHH
Q 031038          103 ASGIPRYAYKDIQK  116 (167)
Q Consensus       103 ~~~~~~~~~~~l~~  116 (167)
                      ..+...+..++|-.
T Consensus       119 tpsvmeiEmeeldk  132 (146)
T PF15102_consen  119 TPSVMEIEMEELDK  132 (146)
T ss_pred             CcchhhhhHHHHHh
Confidence            33445566666643

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=96.18  E-value=0.0089  Score=44.08  Aligned_cols=42  Identities=38%  Similarity=0.560  Sum_probs=33.9

Q ss_pred             hccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      .||+|+||.||+|...++..+++|.+.........+|..|+.
T Consensus        13 ~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~   54 (261)
T cd05148          13 KLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQ   54 (261)
T ss_pred             hhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHH
Confidence            899999999999999888999999997654434556776654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.16  E-value=0.0081  Score=47.85  Aligned_cols=42  Identities=33%  Similarity=0.621  Sum_probs=30.7

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcc-cHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQ-GEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~-~~~~F~~e~  164 (167)
                      ..||+|.||.||+|... .+..||+|.++..... ..++..+|+
T Consensus        19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei   62 (467)
T KOG0201|consen   19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEI   62 (467)
T ss_pred             hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHH
Confidence            38999999999999984 4678999999764432 234555544

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=96.07  E-value=0.011  Score=46.49  Aligned_cols=43  Identities=30%  Similarity=0.491  Sum_probs=31.2

Q ss_pred             hhccccccccEEEEEc------CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM------PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++..      ..+..||||.++... ....+.|.+|+.
T Consensus        41 ~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~   90 (375)
T cd05104          41 KTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELK   90 (375)
T ss_pred             heecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHH
Confidence            5999999999999974      335589999996532 223456777764

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=96.03  E-value=0.011  Score=45.83  Aligned_cols=43  Identities=28%  Similarity=0.507  Sum_probs=30.9

Q ss_pred             hhccccccccEEEEEc------CCCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM------PSGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|..      ..+..||||.++.... .....+..|+.
T Consensus        13 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   62 (343)
T cd05103          13 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK   62 (343)
T ss_pred             ccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHH
Confidence            4899999999999973      3567899999965332 22345666654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=95.97  E-value=0.014  Score=47.94  Aligned_cols=43  Identities=33%  Similarity=0.578  Sum_probs=33.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      .+||+|-||.||-|.- ..|+.||||.++...  .++++...+|+.
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVa  615 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVA  615 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHH
Confidence            7899999999999988 579999999996643  334556666664

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=95.96  E-value=0.013  Score=46.71  Aligned_cols=43  Identities=30%  Similarity=0.470  Sum_probs=31.4

Q ss_pred             hhccccccccEEEEEcC------CCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP------SGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|+..      .+..||||.++.... ...+.|..|++
T Consensus        43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~   92 (400)
T cd05105          43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELK   92 (400)
T ss_pred             heecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHH
Confidence            58999999999999852      234699999965432 23456888775

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=95.94  E-value=0.019  Score=46.53  Aligned_cols=30  Identities=27%  Similarity=0.365  Sum_probs=27.4

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~  152 (167)
                      +.++.|++|.||+|++.+|..||||..++.
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            579999999999999999999999998654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=95.92  E-value=0.017  Score=42.73  Aligned_cols=43  Identities=30%  Similarity=0.507  Sum_probs=31.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||+|.. .++..+|+|.+..........+.+|+.
T Consensus        15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~   58 (267)
T cd06646          15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIF   58 (267)
T ss_pred             heeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHH
Confidence            4899999999999997 577889999996543333345555553

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=95.92  E-value=0.011  Score=45.16  Aligned_cols=42  Identities=40%  Similarity=0.582  Sum_probs=30.5

Q ss_pred             hccccccccEEEEEcC-CCc----EEEEEEeccCC-cccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATMP-SGG----VAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~-~g~----~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      .||+|+||.||+|.+. ++.    .||+|.++... ....++|..|+.
T Consensus        14 ~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~   61 (316)
T cd05108          14 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY   61 (316)
T ss_pred             eeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHH
Confidence            8999999999999873 333    38999996543 233467777764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=95.92  E-value=0.007  Score=46.70  Aligned_cols=43  Identities=33%  Similarity=0.575  Sum_probs=30.9

Q ss_pred             hhccccccccEEEEEc------CCCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM------PSGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|..      ..+..||||.++.... .....|..|++
T Consensus        13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   62 (338)
T cd05102          13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELK   62 (338)
T ss_pred             eEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHH
Confidence            4899999999999974      2346799999965332 22356777764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=95.92  E-value=0.0092  Score=49.94  Aligned_cols=44  Identities=30%  Similarity=0.594  Sum_probs=32.9

Q ss_pred             hhhhccccccccEEEEEcCC---C--cEEEEEEeccCCc-ccHHHHHHHH
Q 031038          121 FTNILGQGAFGPVYKATMPS---G--GVAAIKVLASDSH-QGEKEFQTEV  164 (167)
Q Consensus       121 f~~~lg~g~~g~vy~g~l~~---g--~~vavk~l~~~~~-~~~~~F~~e~  164 (167)
                      ...+||+|-||.||+|++.+   |  .-||||.-+.++. .+.+.|++|.
T Consensus       393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa  442 (974)
T KOG4257|consen  393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEA  442 (974)
T ss_pred             HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHH
Confidence            34599999999999999933   2  3589998876553 3457798886

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=95.82  E-value=0.027  Score=43.87  Aligned_cols=54  Identities=28%  Similarity=0.471  Sum_probs=39.9

Q ss_pred             ccCHHHHHHHhhhhhhhccccccccEEEEEc-CCCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          108 RYAYKDIQKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       108 ~~~~~~l~~~~~~f~~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      .+++.||+...     .||+|+.|.|||... +.+...|+|.+..+. ....++..+|+++
T Consensus        75 ~i~~~dle~~~-----~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~i  130 (364)
T KOG0581|consen   75 GISLSDLERLG-----VLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEI  130 (364)
T ss_pred             ccCHHHhhhhh-----hcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHH
Confidence            46667776544     999999999999998 467788999994433 3335677777754

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=95.81  E-value=0.019  Score=45.92  Aligned_cols=43  Identities=35%  Similarity=0.507  Sum_probs=31.4

Q ss_pred             hhccccccccEEEEEcC------CCcEEEEEEeccCCcc-cHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP------SGGVAAIKVLASDSHQ-GEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~~~-~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|...      .+..||+|.++..... ....|..|++
T Consensus        43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~   92 (401)
T cd05107          43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELK   92 (401)
T ss_pred             hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHH
Confidence            48999999999999863      3357999999654322 2346777765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2

Probab=95.81  E-value=0.013  Score=35.99  Aligned_cols=36  Identities=17%  Similarity=0.207  Sum_probs=21.4

Q ss_pred             ceeehhhHHHHHHHHHHHHHHHhhhheecccCcccC
Q 031038            7 LVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRC   42 (167)
Q Consensus         7 ~~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~~~~~~   42 (167)
                      +.-+++-..++++++++++++.+.||++|+|.+.+.
T Consensus        30 ~~~Lgm~~lvI~~iFil~VilwfvCC~kRkrsRrPI   65 (94)
T PF05393_consen   30 WPNLGMWFLVICGIFILLVILWFVCCKKRKRSRRPI   65 (94)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHhhhccCCc
Confidence            344555566666666666666666666666665443

; GO: 0016021 integral to membrane

>PF10577 UPF0560: Uncharacterised protein family UPF0560; InterPro: IPR018890 This family of proteins has no known function

Probab=95.76  E-value=0.01  Score=50.54  Aligned_cols=32  Identities=25%  Similarity=0.150  Sum_probs=20.5

Q ss_pred             eeehhhHHHHHHHHHHHHHHHhhhheecccCc
Q 031038            8 VIIGICVGLALGILIATLVFFGLRWYKKHDHF   39 (167)
Q Consensus         8 ~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~~~   39 (167)
                      .+.+|+.|.++++++++++++|+||||+.+.+
T Consensus       274 fLl~ILG~~~livl~lL~vLl~yCrrkc~~~r  305 (807)
T PF10577_consen  274 FLLAILGGTALIVLILLCVLLCYCRRKCLKPR  305 (807)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcccCCcc
Confidence            34566666666666667777777777654443

>PF07213 DAP10: DAP10 membrane protein; InterPro: IPR009861 This family consists of several mammalian DAP10 membrane proteins

Probab=95.76  E-value=0.011  Score=35.70  Aligned_cols=35  Identities=20%  Similarity=0.173  Sum_probs=23.8

Q ss_pred             CCcceeehhhHHHHHHHHHHHHHHHhhhheecccC
Q 031038            4 KSDLVIIGICVGLALGILIATLVFFGLRWYKKHDH   38 (167)
Q Consensus         4 ~s~~~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~~   38 (167)
                      ++.++++||++|-+++-++|++..+++-|.|+|+.
T Consensus        31 ls~g~LaGiV~~D~vlTLLIv~~vy~car~r~r~~   65 (79)
T PF07213_consen   31 LSPGLLAGIVAADAVLTLLIVLVVYYCARPRRRPT   65 (79)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCc
Confidence            46678889998888766766666666655554444

In activated mouse natural killer (NK) cells, the NKG2D receptor associates with two intracellular adaptors, DAP10 and DAP12, which trigger phosphatidyl inositol 3 kinase (PI3K) and Syk family protein tyrosine kinases, respectively. It has been suggested that the DAP10-PI3K pathway is sufficient to initiate NKG2D-mediated killing of target cells [].

>PF12877 DUF3827: Domain of unknown function (DUF3827); InterPro: IPR024606 The function of the proteins in this entry is not currently known, but one of the human proteins (Q9HCM3 from SWISSPROT) has been implicated in pilocytic astrocytomas [, , ]

Probab=95.74  E-value=0.011  Score=49.14  Aligned_cols=31  Identities=23%  Similarity=0.381  Sum_probs=20.2

Q ss_pred             CcceeehhhHHHHHHHHHHHHHHHhhhheec
Q 031038            5 SDLVIIGICVGLALGILIATLVFFGLRWYKK   35 (167)
Q Consensus         5 s~~~ii~ii~g~~~~v~~i~~~~~~~~~~r~   35 (167)
                      ..|+|+|+++.+++++++++++.+++||+.|
T Consensus       268 NlWII~gVlvPv~vV~~Iiiil~~~LCRk~K  298 (684)
T PF12877_consen  268 NLWIIAGVLVPVLVVLLIIIILYWKLCRKNK  298 (684)
T ss_pred             CeEEEehHhHHHHHHHHHHHHHHHHHhcccc
Confidence            4588899887777766665555555555443

In the majority of cases of pilocytic astrocytomas a tandem duplication produces an in-frame fusion of the gene encoding this protein and the BRAF oncogene. The resulting fusion protein has constitutive BRAF kinase activity and is capable of transforming cells.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=95.51  E-value=0.02  Score=40.86  Aligned_cols=29  Identities=34%  Similarity=0.418  Sum_probs=26.3

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      +.||+|+||.||++...+|..||||.++.
T Consensus        21 ~~i~~G~~g~Vy~~~~~~g~~vavK~~~~   49 (198)
T cd05144          21 NQIGVGKESDVYLALDPDGNPVALKFHRL   49 (198)
T ss_pred             CccccCcceEEEEEEcCCCCEEEEEEEec
Confidence            68999999999999998899999998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=95.51  E-value=0.022  Score=42.52  Aligned_cols=43  Identities=14%  Similarity=0.265  Sum_probs=32.2

Q ss_pred             hhccccccccEEEEEcCC-----CcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS-----GGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~-----g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ++||+|.||.||+|...+     +..|++|.+.... ....+.|..|+.
T Consensus        12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~   60 (280)
T cd05043          12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESC   60 (280)
T ss_pred             eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHH
Confidence            489999999999999855     6789999986543 223456766654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PF04689 S1FA: DNA binding protein S1FA; InterPro: IPR006779 S1FA is an unusual small plant peptide of only 70 amino acids with a basic domain which contains a nuclear localization signal and a putative DNA binding helix

Probab=95.51  E-value=0.04  Score=31.72  Aligned_cols=33  Identities=12%  Similarity=-0.052  Sum_probs=27.1

Q ss_pred             CcCCcceeehhhHHHHHHHHHHHHHHHhhhhee
Q 031038            2 VHKSDLVIIGICVGLALGILIATLVFFGLRWYK   34 (167)
Q Consensus         2 ~~~s~~~ii~ii~g~~~~v~~i~~~~~~~~~~r   34 (167)
                      +++++++|+.++++-+++++++.-.+++.++++
T Consensus         8 KGlnPGlIVLlvV~g~ll~flvGnyvlY~Yaqk   40 (69)
T PF04689_consen    8 KGLNPGLIVLLVVAGLLLVFLVGNYVLYVYAQK   40 (69)
T ss_pred             cCCCCCeEEeehHHHHHHHHHHHHHHHHHHHhh
Confidence            578899999999998888888887777777655

S1FA is highly conserved between dicotyledonous and monocotyledonous plants and may be a DNA-binding protein that specifically recognises the negative promoter element S1F [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=95.44  E-value=0.033  Score=42.14  Aligned_cols=42  Identities=31%  Similarity=0.395  Sum_probs=32.6

Q ss_pred             hccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      .||+|.||.||++.. .++..+++|.+..........|.+|+.
T Consensus        27 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~   69 (292)
T cd06657          27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVV   69 (292)
T ss_pred             HcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHH
Confidence            789999999999988 578899999986544334456777764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=95.42  E-value=0.026  Score=46.35  Aligned_cols=42  Identities=33%  Similarity=0.459  Sum_probs=31.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~  164 (167)
                      +.||+|+||.||++.. .+|..+|||.++...  ......+..|+
T Consensus        38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei   82 (496)
T PTZ00283         38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEV   82 (496)
T ss_pred             EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHH
Confidence            5899999999999976 578999999985432  22334566665

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=95.39  E-value=0.041  Score=42.66  Aligned_cols=43  Identities=30%  Similarity=0.330  Sum_probs=30.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|.. ..|..+|+|.+....  ......+..|+.
T Consensus        21 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~   66 (342)
T cd07879          21 KQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELT   66 (342)
T ss_pred             EEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHH
Confidence            6899999999999986 468899999985421  112244555553

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains

Probab=95.38  E-value=0.014  Score=42.03  Aligned_cols=28  Identities=21%  Similarity=0.235  Sum_probs=18.8

Q ss_pred             cceeehhhHHHHHHHHHHHHHHHhhhhe
Q 031038            6 DLVIIGICVGLALGILIATLVFFGLRWY   33 (167)
Q Consensus         6 ~~~ii~ii~g~~~~v~~i~~~~~~~~~~   33 (167)
                      ..+++||++|++.++++|++..++.|||
T Consensus        37 ~~I~iaiVAG~~tVILVI~i~v~vR~CR   64 (221)
T PF08374_consen   37 VKIMIAIVAGIMTVILVIFIVVLVRYCR   64 (221)
T ss_pred             eeeeeeeecchhhhHHHHHHHHHHHHHh
Confidence            3578888888887666666665555343

They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.36  E-value=0.087  Score=44.32  Aligned_cols=32  Identities=38%  Similarity=0.576  Sum_probs=27.0

Q ss_pred             hhhccccccccEEEEEcC-CCcEEEEEEeccCC
Q 031038          122 TNILGQGAFGPVYKATMP-SGGVAAIKVLASDS  153 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~  153 (167)
                      ..+||+|+||.|+.+.+. ++...|||.|+...
T Consensus       373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~  405 (694)
T KOG0694|consen  373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGD  405 (694)
T ss_pred             EEEeccCcCceEEEEEEcCCCcEEEEEEeeccc
Confidence            379999999999999994 56788999997644

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=95.34  E-value=0.025  Score=43.05  Aligned_cols=53  Identities=25%  Similarity=0.416  Sum_probs=36.8

Q ss_pred             ccCHHHHHHHhhhhhhhccccccccEEEEEc-CCCcEEEEEEecc--CCcccHHHHHHHHh
Q 031038          108 RYAYKDIQKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLAS--DSHQGEKEFQTEVR  165 (167)
Q Consensus       108 ~~~~~~l~~~~~~f~~~lg~g~~g~vy~g~l-~~g~~vavk~l~~--~~~~~~~~F~~e~~  165 (167)
                      +-++++.+...     .||.|.||.|||+.- .+|..+|.|.++-  .+.+...+...|+.
T Consensus        15 ~~~l~~y~Il~-----~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~   70 (375)
T KOG0591|consen   15 QKTLADYQILK-----KIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEIS   70 (375)
T ss_pred             cccHHHHHHHH-----HHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHH
Confidence            44555443333     899999999999964 7899999999853  33444456666653

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=95.33  E-value=0.016  Score=43.30  Aligned_cols=52  Identities=23%  Similarity=0.487  Sum_probs=34.6

Q ss_pred             HHHHHHhhhhh--hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          112 KDIQKATQNFT--NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       112 ~~l~~~~~~f~--~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      +.+..+..+|.  ..||+|.||.||++.. ..+..+++|.++.... ...++..|+
T Consensus        11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~   65 (286)
T cd06638          11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEY   65 (286)
T ss_pred             ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHH
Confidence            34444444444  6899999999999987 4678899998865321 234455554

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=95.33  E-value=0.033  Score=45.34  Aligned_cols=30  Identities=37%  Similarity=0.686  Sum_probs=26.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ..||+|.||.||++.= ..|..||+|++.-.
T Consensus       123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d  153 (560)
T KOG0600|consen  123 EKIGEGTYGQVYKARDLETGKIVALKKVRFD  153 (560)
T ss_pred             HHhcCcchhheeEeeecccCcEEEEEEeecc
Confidence            5899999999999964 67899999999543

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=95.32  E-value=0.035  Score=41.47  Aligned_cols=54  Identities=30%  Similarity=0.589  Sum_probs=35.3

Q ss_pred             CHHHHHHHhhhhh--hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          110 AYKDIQKATQNFT--NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       110 ~~~~l~~~~~~f~--~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      ++.++..+...|.  ..+|.|.||.||+|.. .++..+|+|.+.... ....++..|+
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~   63 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEI   63 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHH
Confidence            3344434444443  6899999999999998 467889999885432 2234455544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=95.31  E-value=0.0063  Score=40.26  Aligned_cols=33  Identities=24%  Similarity=0.375  Sum_probs=28.8

Q ss_pred             hhh-hhccccccccEEEEEcCCCcEEEEEEeccC
Q 031038          120 NFT-NILGQGAFGPVYKATMPSGGVAAIKVLASD  152 (167)
Q Consensus       120 ~f~-~~lg~g~~g~vy~g~l~~g~~vavk~l~~~  152 (167)
                      .|. .-++.++.|.||+|++.+|+.||||...+.
T Consensus        13 ~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   13 EFDPEPLASASIAQVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             HCCcchhhheehhhheeeeecccchhhhhhcchH
Confidence            444 689999999999999999999999998664

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=95.29  E-value=0.036  Score=41.39  Aligned_cols=42  Identities=45%  Similarity=0.760  Sum_probs=30.0

Q ss_pred             hhccccccccEEEEEc-CCCc----EEEEEEeccCCc-ccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGG----VAAIKVLASDSH-QGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~----~vavk~l~~~~~-~~~~~F~~e~  164 (167)
                      +.||+|+||.||+|.. ++|.    .||+|.++.... ...++|..|+
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~   60 (279)
T cd05109          13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEA   60 (279)
T ss_pred             eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHH
Confidence            3899999999999986 4554    479999865432 2345666665

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>PF10873 DUF2668: Protein of unknown function (DUF2668); InterPro: IPR022640 Members in this family of proteins are annotated as cysteine and tyrosine-rich protein 1, however currently no function is known []

Probab=95.28  E-value=0.026  Score=38.05  Aligned_cols=36  Identities=17%  Similarity=0.134  Sum_probs=26.5

Q ss_pred             CCcceeehhhHHHHHHHHHHHHHHHhhhheecccCc
Q 031038            4 KSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHF   39 (167)
Q Consensus         4 ~s~~~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~~~   39 (167)
                      ++..+|.||+.|+++++.+++.+++|+|..-++.+.
T Consensus        58 lsgtAIaGIVfgiVfimgvva~i~icvCmc~kn~rg   93 (155)
T PF10873_consen   58 LSGTAIAGIVFGIVFIMGVVAGIAICVCMCMKNSRG   93 (155)
T ss_pred             cccceeeeeehhhHHHHHHHHHHHHHHhhhhhcCCC
Confidence            567789999999998888887777777655444433

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=95.26  E-value=0.036  Score=43.71  Aligned_cols=43  Identities=33%  Similarity=0.511  Sum_probs=30.7

Q ss_pred             hhccccccccEEEEEc------CCCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM------PSGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++..      .++..||+|.++.... .....|..|++
T Consensus        44 ~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   93 (374)
T cd05106          44 KTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELK   93 (374)
T ss_pred             heecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHH
Confidence            5899999999999874      2345799999965432 22355667764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=95.25  E-value=0.03  Score=43.50  Aligned_cols=56  Identities=27%  Similarity=0.310  Sum_probs=38.9

Q ss_pred             CHHHHHHHhhhhh--hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          110 AYKDIQKATQNFT--NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       110 ~~~~l~~~~~~f~--~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ...++...+.+|.  ..||+|+||.||++.. .+|..||+|+++...  ....+.+.+|++
T Consensus         8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~   68 (345)
T cd07877           8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR   68 (345)
T ss_pred             HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHH
Confidence            3345555666665  6899999999999986 578899999996422  222345666654

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=95.21  E-value=0.04  Score=41.45  Aligned_cols=43  Identities=40%  Similarity=0.674  Sum_probs=33.7

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||.|.||.||+|... ++..+++|.+........++|..|+.
T Consensus        18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~   61 (292)
T cd06644          18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIE   61 (292)
T ss_pred             heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHH
Confidence            38999999999999884 47889999997654444567777764

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=95.20  E-value=0.011  Score=49.77  Aligned_cols=43  Identities=30%  Similarity=0.592  Sum_probs=33.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|+- ..|..||||..+... ....+....|++
T Consensus        19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~Eie   63 (732)
T KOG4250|consen   19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIE   63 (732)
T ss_pred             hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHH
Confidence            3899999999999994 679999999997644 333456666665

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=95.20  E-value=0.013  Score=49.16  Aligned_cols=42  Identities=31%  Similarity=0.464  Sum_probs=34.3

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      +.||-|-||.||.|+|. -...||||.|+.+ ....++|+.|..
T Consensus       273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAA  315 (1157)
T KOG4278|consen  273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAA  315 (1157)
T ss_pred             eccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHH
Confidence            78999999999999994 3568999999765 345688988763

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=95.17  E-value=0.052  Score=40.14  Aligned_cols=42  Identities=36%  Similarity=0.566  Sum_probs=31.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      ..||+|.||.||++.. .++..+|+|.++.........+.+|+
T Consensus        15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~   57 (267)
T cd06645          15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEI   57 (267)
T ss_pred             HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHH
Confidence            4899999999999987 46789999998654333334555555

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A

Probab=95.17  E-value=0.011  Score=35.81  Aligned_cols=18  Identities=22%  Similarity=0.447  Sum_probs=11.8

Q ss_pred             ccCHHHHHHHhhhhhhhc
Q 031038          108 RYAYKDIQKATQNFTNIL  125 (167)
Q Consensus       108 ~~~~~~l~~~~~~f~~~l  125 (167)
                      ..+++|-..+-.+|...|
T Consensus        56 P~TYEDP~qAV~eFAkEI   73 (75)
T PF14575_consen   56 PHTYEDPNQAVREFAKEI   73 (75)
T ss_dssp             GGGSSSHHHHHHHCSSB-
T ss_pred             cccccCHHHHHHHHHhhc
Confidence            457777777777776443

...

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=95.16  E-value=0.018  Score=48.13  Aligned_cols=29  Identities=41%  Similarity=0.657  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEcC-C----CcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-S----GGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~----g~~vavk~l~~  151 (167)
                      +.||+|+||.||+|... +    +..+|+|++..
T Consensus       138 ~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~  171 (566)
T PLN03225        138 KKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE  171 (566)
T ss_pred             EEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence            78999999999999985 4    67899999854

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=95.14  E-value=0.019  Score=43.19  Aligned_cols=44  Identities=30%  Similarity=0.604  Sum_probs=34.4

Q ss_pred             cCHHHHHHHhhhhh--hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          109 YAYKDIQKATQNFT--NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       109 ~~~~~l~~~~~~f~--~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      +++.++..++.+|.  ..||+|.||.||++.. .++..+|+|.+...
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~   58 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI   58 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc
Confidence            45556666666775  7899999999999988 56788999998643

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=95.14  E-value=0.041  Score=41.85  Aligned_cols=42  Identities=21%  Similarity=0.351  Sum_probs=30.3

Q ss_pred             hccccccccEEEEEcC-CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATMP-SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      .||+|+||.||+|... .+..+|+|.++... ......+.+|++
T Consensus        13 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~   56 (309)
T cd07872          13 KLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVS   56 (309)
T ss_pred             EecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHH
Confidence            8999999999999874 56789999986432 222344555553

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=95.07  E-value=0.055  Score=40.09  Aligned_cols=41  Identities=37%  Similarity=0.703  Sum_probs=30.3

Q ss_pred             hccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      .||+|.||.||+|... .+..+|+|.++... ....++..|+.
T Consensus        13 ~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~   54 (272)
T cd06637          13 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEIN   54 (272)
T ss_pred             heeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHH
Confidence            7999999999999884 57789999986432 23345655553

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=95.06  E-value=0.031  Score=43.14  Aligned_cols=30  Identities=37%  Similarity=0.658  Sum_probs=25.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      +.+|+|.||.||+|.- ..|..||+|++...
T Consensus        17 eklGeGtyg~Vykar~~~~g~~VALKkirl~   47 (323)
T KOG0594|consen   17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLE   47 (323)
T ss_pred             HHhCCCCceEEEEEEEecCCCEEEEEEEecc
Confidence            3799999999999987 57789999999654

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=95.03  E-value=0.054  Score=41.01  Aligned_cols=43  Identities=30%  Similarity=0.410  Sum_probs=32.7

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .++..+|+|.+........+.|..|+.
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~   68 (297)
T cd06656          25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEIL   68 (297)
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHH
Confidence            5899999999999986 578899999996543333455666654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=95.01  E-value=0.056  Score=40.97  Aligned_cols=42  Identities=29%  Similarity=0.334  Sum_probs=32.1

Q ss_pred             hccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      .||+|+||.||++.. .++..+++|.++.......+.|.+|+.
T Consensus        28 ~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~   70 (297)
T cd06659          28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVV   70 (297)
T ss_pred             hcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHH
Confidence            789999999999987 468899999996543334456666653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=94.99  E-value=0.027  Score=41.56  Aligned_cols=31  Identities=35%  Similarity=0.465  Sum_probs=27.5

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS  153 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~  153 (167)
                      ..||+|+||.||++...++..+|+|.+....
T Consensus        12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~   42 (260)
T cd05067          12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS   42 (260)
T ss_pred             eeeccCccceEEeeecCCCceEEEEEecCCC
Confidence            5899999999999999888999999996533

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=94.92  E-value=0.055  Score=40.03  Aligned_cols=44  Identities=30%  Similarity=0.456  Sum_probs=33.0

Q ss_pred             hhhhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          121 FTNILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       121 f~~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      +.+.||+|.||.||+|... .+..+++|.++.. .....+|.+|++
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~   54 (263)
T cd05052          10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAA   54 (263)
T ss_pred             EeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHH
Confidence            3448999999999999984 4778999998643 233456777764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.83  E-value=0.049  Score=45.56  Aligned_cols=36  Identities=33%  Similarity=0.525  Sum_probs=29.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEK  158 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~  158 (167)
                      ..||.|+||.||-+.- .+...||+|++.-..++..+
T Consensus        32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~E   68 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE   68 (948)
T ss_pred             HHhcCCccceeEEeeccCccceeeeeeccccccccHH
Confidence            4899999999999876 46678999999776555543

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=94.72  E-value=0.026  Score=43.85  Aligned_cols=30  Identities=30%  Similarity=0.560  Sum_probs=25.7

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      |.|++|.||.||+|.= ..+..||+|+++-.
T Consensus        82 nrI~EGtyGiVYRakdk~t~eIVALKr~kme  112 (419)
T KOG0663|consen   82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKME  112 (419)
T ss_pred             hhcccCcceeEEEeccCCcceeEEeeecccc
Confidence            5899999999999987 45678999999654

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=94.67  E-value=0.043  Score=42.53  Aligned_cols=43  Identities=35%  Similarity=0.479  Sum_probs=29.5

Q ss_pred             hhccccccccEEEEEcC------CCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP------SGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|...      .+..||+|+++.... .....+..|+.
T Consensus        13 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~   62 (337)
T cd05054          13 KPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELK   62 (337)
T ss_pred             cccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHH
Confidence            38999999999999752      246899999965322 22345555654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=94.66  E-value=0.076  Score=41.03  Aligned_cols=43  Identities=26%  Similarity=0.264  Sum_probs=30.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- ..+..||||.+....  ......+.+|++
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~   66 (343)
T cd07878          21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELR   66 (343)
T ss_pred             eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHH
Confidence            5899999999999986 467889999986422  122345556654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=94.60  E-value=0.074  Score=40.38  Aligned_cols=44  Identities=32%  Similarity=0.579  Sum_probs=30.6

Q ss_pred             hhhccccccccEEEEEcC-CCc--EEEEEEeccCC-cccHHHHHHHHh
Q 031038          122 TNILGQGAFGPVYKATMP-SGG--VAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l~-~g~--~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      .+.||+|+||.||++... ++.  .+++|.++... .....+|.+|++
T Consensus        12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~   59 (303)
T cd05088          12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE   59 (303)
T ss_pred             eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHH
Confidence            368999999999999974 444  45888876432 233456777764

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=94.53  E-value=0.087  Score=39.69  Aligned_cols=43  Identities=28%  Similarity=0.454  Sum_probs=30.9

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      +.+|+|.||.||+|... +|..+++|.++...  ......+.+|++
T Consensus        13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~   58 (302)
T cd07864          13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIK   58 (302)
T ss_pred             eeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHH
Confidence            38999999999999984 57899999996432  122244555553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=94.45  E-value=0.093  Score=39.71  Aligned_cols=43  Identities=28%  Similarity=0.406  Sum_probs=32.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..+|+|.||.||+|.- .++..+++|.+........+.|.+|+.
T Consensus        26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~   69 (296)
T cd06654          26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL   69 (296)
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHH
Confidence            4799999999999985 567899999996544444456766654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=94.44  E-value=0.082  Score=39.96  Aligned_cols=42  Identities=29%  Similarity=0.323  Sum_probs=32.1

Q ss_pred             hccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      .||+|+||.||++.. .++..+|+|.++.......+.|.+|+.
T Consensus        29 ~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~   71 (292)
T cd06658          29 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVV   71 (292)
T ss_pred             cccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHH
Confidence            789999999999987 467899999986544344456777654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=94.42  E-value=0.058  Score=41.61  Aligned_cols=43  Identities=30%  Similarity=0.384  Sum_probs=31.5

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      +.||+|.||.||++... ++..+|+|.++...   ....+.|.+|+.
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~   70 (329)
T PTZ00263         24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKS   70 (329)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHH
Confidence            58999999999999984 57899999985421   122345666654

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=94.39  E-value=0.071  Score=39.76  Aligned_cols=43  Identities=35%  Similarity=0.523  Sum_probs=31.8

Q ss_pred             hhccccccccEEEEEcCC------CcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS------GGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~------g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|...+      +..|++|.+.... .....+|..|+.
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~   61 (277)
T cd05036          12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEAL   61 (277)
T ss_pred             eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHH
Confidence            389999999999999853      4578999886543 233456887764

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=94.33  E-value=0.07  Score=41.44  Aligned_cols=56  Identities=23%  Similarity=0.433  Sum_probs=41.5

Q ss_pred             ccCHHHHHHHhhhhhhhccccccccEEEEE-cCCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          108 RYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       108 ~~~~~~l~~~~~~f~~~lg~g~~g~vy~g~-l~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      .-+++|+-..|.+   +||+|+++.|-..+ +..|...|||.++......+....+|+++
T Consensus        72 ~g~F~d~YkLt~e---~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~  128 (463)
T KOG0607|consen   72 SGKFEDMYKLTSE---LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVET  128 (463)
T ss_pred             cchHHHHHHhHHH---HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHH
Confidence            3457888777766   99999999987554 46788999999977644455666666654

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=94.28  E-value=0.083  Score=40.87  Aligned_cols=43  Identities=33%  Similarity=0.641  Sum_probs=31.4

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      +.||+|.||.||.+... +|...|||..........+.+.+|+.
T Consensus        23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~   66 (313)
T KOG0198|consen   23 KLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIR   66 (313)
T ss_pred             ccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHH
Confidence            48999999999999995 48899999996543222344555543

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=94.24  E-value=0.04  Score=43.32  Aligned_cols=43  Identities=30%  Similarity=0.379  Sum_probs=30.7

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccC---CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD---SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~---~~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||++... .+..+|+|.++..   .......|..|++
T Consensus        49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~   95 (370)
T cd05596          49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERD   95 (370)
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHH
Confidence            68999999999999874 5789999999532   1222344556653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>smart00090 RIO RIO-like kinase

Probab=94.21  E-value=0.062  Score=39.85  Aligned_cols=29  Identities=28%  Similarity=0.353  Sum_probs=26.2

Q ss_pred             hhccccccccEEEEE--cCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKAT--MPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~--l~~g~~vavk~l~~  151 (167)
                      ..||+|.||.||+|.  ..+|..||+|.++.
T Consensus        34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~   64 (237)
T smart00090       34 GCISTGKEANVYHALDFDGSGKERAVKIYRT   64 (237)
T ss_pred             CeeccCcceeEEEEEecCCCCcEEEEEEEEc
Confidence            689999999999998  67899999999864

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=94.21  E-value=0.09  Score=40.99  Aligned_cols=43  Identities=28%  Similarity=0.196  Sum_probs=31.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- ..|..+|+|.+....  ......+.+|+.
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~   72 (359)
T cd07876          27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV   72 (359)
T ss_pred             EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHH
Confidence            5899999999999986 457899999995421  222355666654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=94.19  E-value=0.1  Score=39.37  Aligned_cols=43  Identities=30%  Similarity=0.410  Sum_probs=32.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||++.- .++..+++|.++.......+.|..|+.
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~   68 (293)
T cd06647          25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEIL   68 (293)
T ss_pred             eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHH
Confidence            4799999999999985 467889999986543333456666653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=94.17  E-value=0.1  Score=39.21  Aligned_cols=43  Identities=28%  Similarity=0.303  Sum_probs=32.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      +.||+|.+|.||++.. .++..+++|.++.......+.|.+|+.
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~   68 (285)
T cd06648          25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVV   68 (285)
T ss_pred             eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHH
Confidence            4899999999999986 467899999986544334455666653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>PF14991 MLANA: Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P 2GUO_C 3MRQ_P 2GTW_C 3L6F_C 3MRP_P

Probab=94.06  E-value=0.0077  Score=38.86  Aligned_cols=20  Identities=20%  Similarity=0.099  Sum_probs=0.4

Q ss_pred             HHHHHHHHHHHHHHhhhhee
Q 031038           15 GLALGILIATLVFFGLRWYK   34 (167)
Q Consensus        15 g~~~~v~~i~~~~~~~~~~r   34 (167)
                      |++++++.+++++-||++||
T Consensus        30 GiL~VILgiLLliGCWYckR   49 (118)
T PF14991_consen   30 GILIVILGILLLIGCWYCKR   49 (118)
T ss_dssp             S-------------------
T ss_pred             eeHHHHHHHHHHHhheeeee
Confidence            33444444444555555444

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=94.04  E-value=0.081  Score=39.23  Aligned_cols=43  Identities=26%  Similarity=0.376  Sum_probs=31.3

Q ss_pred             hhccccccccEEEEEcCCC----cEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSG----GVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g----~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|...+.    ..+++|...... ....+.|.+|+.
T Consensus        12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~   59 (270)
T cd05056          12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAY   59 (270)
T ss_pred             eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHH
Confidence            4899999999999987432    468999886543 333467877764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PTZ00036 glycogen synthase kinase; Provisional

Probab=94.03  E-value=0.075  Score=42.92  Aligned_cols=29  Identities=41%  Similarity=0.669  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||+|.. ..+..||||++..
T Consensus        72 ~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~  101 (440)
T PTZ00036         72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQ  101 (440)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEec
Confidence            6899999999999987 4678999999854

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=93.96  E-value=0.064  Score=42.25  Aligned_cols=43  Identities=30%  Similarity=0.379  Sum_probs=30.5

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccC---CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD---SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~---~~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++... ++..+|+|.++..   .......|.+|++
T Consensus        49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~   95 (370)
T cd05621          49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERD   95 (370)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHH
Confidence            68999999999999884 5778999998531   1122344656654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=93.95  E-value=0.12  Score=39.33  Aligned_cols=43  Identities=33%  Similarity=0.485  Sum_probs=31.5

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCc---ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSH---QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~---~~~~~F~~e~~  165 (167)
                      +.||+|.||.||+|... ++..|++|.+.....   ....+|..|++
T Consensus        21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~   67 (307)
T cd06607          21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVR   67 (307)
T ss_pred             eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHH
Confidence            48999999999999874 678999999854322   22345766654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=93.94  E-value=0.12  Score=38.99  Aligned_cols=42  Identities=26%  Similarity=0.489  Sum_probs=30.8

Q ss_pred             hhccccccccEEEEEcCC-CcEEEEEEeccCC-cccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATMPS-GGVAAIKVLASDS-HQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~-g~~vavk~l~~~~-~~~~~~F~~e~  164 (167)
                      ..||+|.||.||++...+ +..+|||.++... .....++..|+
T Consensus        21 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~   64 (296)
T cd06618          21 GEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDL   64 (296)
T ss_pred             eEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHH
Confidence            589999999999999964 8899999996432 22234455444

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=93.93  E-value=0.11  Score=38.88  Aligned_cols=42  Identities=36%  Similarity=0.555  Sum_probs=28.2

Q ss_pred             hhccccccccEEEEEc-CCCc----EEEEEEeccCCc-ccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGG----VAAIKVLASDSH-QGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~----~vavk~l~~~~~-~~~~~F~~e~  164 (167)
                      +.||+|+||.||+|.+ +++.    .+++|.+..... ....+|..|+
T Consensus        13 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~   60 (279)
T cd05111          13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHM   60 (279)
T ss_pred             cccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHH
Confidence            4899999999999997 3444    478888754322 2234565554

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PF13908 Shisa: Wnt and FGF inhibitory regulator

Probab=93.90  E-value=0.17  Score=35.80  Aligned_cols=23  Identities=26%  Similarity=0.524  Sum_probs=16.4

Q ss_pred             ceeehhhHHHHHHHHHHHHHHHh
Q 031038            7 LVIIGICVGLALGILIATLVFFG   29 (167)
Q Consensus         7 ~~ii~ii~g~~~~v~~i~~~~~~   29 (167)
                      .++++|++|+++++++|++++++
T Consensus        75 ~~~~~iivgvi~~Vi~Iv~~Iv~   97 (179)
T PF13908_consen   75 YFITGIIVGVICGVIAIVVLIVC   97 (179)
T ss_pred             cceeeeeeehhhHHHHHHHhHhh
Confidence            35788999998877776554443

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=93.90  E-value=0.047  Score=40.29  Aligned_cols=30  Identities=30%  Similarity=0.489  Sum_probs=26.6

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~  152 (167)
                      ..||+|++|.||+|...++..+|+|.++..
T Consensus        12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~   41 (261)
T cd05068          12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPG   41 (261)
T ss_pred             EEecccCCccEEEEEecCCeEEEEEeeCCC
Confidence            689999999999999877788999999653

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=93.89  E-value=0.076  Score=39.10  Aligned_cols=30  Identities=30%  Similarity=0.485  Sum_probs=26.3

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||+|...++..+++|.+...
T Consensus        12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~   41 (261)
T cd05072          12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPG   41 (261)
T ss_pred             eecCCcCCceEEEEEecCCceEEEEEccCC
Confidence            389999999999999988889999998643

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=93.85  E-value=0.078  Score=40.88  Aligned_cols=48  Identities=31%  Similarity=0.333  Sum_probs=33.5

Q ss_pred             hhhhh--hhccccccccEEEEEc-CCCcEEEEEEecc-CC-cccHHHHHHHHh
Q 031038          118 TQNFT--NILGQGAFGPVYKATM-PSGGVAAIKVLAS-DS-HQGEKEFQTEVR  165 (167)
Q Consensus       118 ~~~f~--~~lg~g~~g~vy~g~l-~~g~~vavk~l~~-~~-~~~~~~F~~e~~  165 (167)
                      +++|.  ..||+|.||.||++.- .++..+|+|.+.. .. ....+.+..|++
T Consensus         9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~   61 (328)
T cd07856           9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELK   61 (328)
T ss_pred             ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHH
Confidence            34444  6899999999999975 4788999998843 21 223355666654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=93.84  E-value=0.087  Score=45.10  Aligned_cols=44  Identities=23%  Similarity=0.374  Sum_probs=35.8

Q ss_pred             hhccccccccEEEEEcCCC-cEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPSG-GVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g-~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      +.|-||+|+.||.+...++ ..+|+|++-..+....+...+|+++
T Consensus        43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~   87 (738)
T KOG1989|consen   43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDI   87 (738)
T ss_pred             EEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHH
Confidence            5899999999999999766 8999999955555556777777764

>PF02480 Herpes_gE: Alphaherpesvirus glycoprotein E; InterPro: IPR003404 Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI), functioning as an immunoglobulin G (IgG) Fc binding protein

Probab=93.79  E-value=0.018  Score=46.60  Aligned_cols=27  Identities=15%  Similarity=0.439  Sum_probs=0.0

Q ss_pred             eeehhhHHHHHHHHHHHHHHHhhhhee
Q 031038            8 VIIGICVGLALGILIATLVFFGLRWYK   34 (167)
Q Consensus         8 ~ii~ii~g~~~~v~~i~~~~~~~~~~r   34 (167)
                      +++++++|+++++++++++++++.++|
T Consensus       353 ~~l~vVlgvavlivVv~viv~vc~~~r  379 (439)
T PF02480_consen  353 ALLGVVLGVAVLIVVVGVIVWVCLRCR  379 (439)
T ss_dssp             ---------------------------
T ss_pred             chHHHHHHHHHHHHHHHHHhheeeeeh
Confidence            445555555554444444444333333

gE is involved in virus spread but is not essential for propagation [].; GO: 0016020 membrane; PDB: 2GJ7_F 2GIY_B.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=93.72  E-value=0.12  Score=43.01  Aligned_cols=30  Identities=27%  Similarity=0.342  Sum_probs=27.1

Q ss_pred             hhccccccccEEEEEcCC-CcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMPS-GGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~-g~~vavk~l~~~  152 (167)
                      ..++.|++|.||++++.+ |+.||||.+++.
T Consensus       125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        125 KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            579999999999999987 999999999654

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=93.70  E-value=0.12  Score=38.91  Aligned_cols=43  Identities=30%  Similarity=0.487  Sum_probs=29.4

Q ss_pred             hhccccccccEEEEEcC------CCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP------SGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|...      .+..||+|.++.... ....+|.+|+.
T Consensus        12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~   61 (288)
T cd05061          12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS   61 (288)
T ss_pred             eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHH
Confidence            38999999999999753      245799998864332 22345666653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=93.69  E-value=0.15  Score=38.98  Aligned_cols=43  Identities=33%  Similarity=0.485  Sum_probs=31.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcc---cHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQ---GEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~---~~~~F~~e~~  165 (167)
                      +.||+|.||.||++.. .++..+++|.+......   ...+|..|++
T Consensus        31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~   77 (317)
T cd06635          31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVK   77 (317)
T ss_pred             heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHH
Confidence            4899999999999987 46789999998643221   2245666654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=93.67  E-value=0.17  Score=37.93  Aligned_cols=42  Identities=33%  Similarity=0.445  Sum_probs=32.8

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      +.+|+|.+|.||+|... ++..+++|.++.... ....|..|++
T Consensus        25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~   67 (286)
T cd06614          25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEIL   67 (286)
T ss_pred             HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHH
Confidence            48999999999999995 678999999965433 4456766664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=93.66  E-value=0.069  Score=42.03  Aligned_cols=29  Identities=34%  Similarity=0.578  Sum_probs=25.0

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++... .+..+|+|.+..
T Consensus        49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~   78 (371)
T cd05622          49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSK   78 (371)
T ss_pred             EEEeecCCeEEEEEEECCCCcEEEEEEEEH
Confidence            78999999999999884 577899999853

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=93.65  E-value=0.14  Score=39.47  Aligned_cols=29  Identities=38%  Similarity=0.517  Sum_probs=24.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      +.||+|+||.||++.- .++..+|+|.++.
T Consensus        15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~   44 (335)
T PTZ00024         15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKI   44 (335)
T ss_pred             hcccCCCceeEEEEEECCCCCeEEEEEeec
Confidence            3799999999999986 4688999999854

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=93.62  E-value=0.16  Score=38.40  Aligned_cols=41  Identities=24%  Similarity=0.391  Sum_probs=29.5

Q ss_pred             hccccccccEEEEEcC-CCcEEEEEEeccCC-cccHHHHHHHH
Q 031038          124 ILGQGAFGPVYKATMP-SGGVAAIKVLASDS-HQGEKEFQTEV  164 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~-~~~~~~F~~e~  164 (167)
                      .||+|+||.||+|... ++..||+|.++... ......+..|+
T Consensus        13 ~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~   55 (301)
T cd07873          13 KLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREV   55 (301)
T ss_pred             EeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHH
Confidence            7999999999999874 57789999986432 22233455554

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=93.60  E-value=0.16  Score=38.50  Aligned_cols=43  Identities=28%  Similarity=0.388  Sum_probs=32.7

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||.|.+|.||+|.- .++..+++|.+........+.|.+|++
T Consensus        25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~   68 (296)
T cd06655          25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEIL   68 (296)
T ss_pred             EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHH
Confidence            4799999999999985 578899999986543334456666654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=93.57  E-value=0.097  Score=38.50  Aligned_cols=30  Identities=33%  Similarity=0.498  Sum_probs=26.4

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~  152 (167)
                      +.||+|+||.||++...++..+++|.+...
T Consensus        12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~   41 (261)
T cd05034          12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPG   41 (261)
T ss_pred             eeeccCcceEEEEEEEcCCceEEEEEecCC
Confidence            389999999999999988888999999653

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=93.54  E-value=0.14  Score=39.63  Aligned_cols=43  Identities=33%  Similarity=0.347  Sum_probs=30.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      +.||+|.||.||++.. .+|..||||.+....  ......+..|++
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~   66 (343)
T cd07880          21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELR   66 (343)
T ss_pred             EEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHH
Confidence            5899999999999986 578899999985321  222345656653

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=93.50  E-value=0.12  Score=38.46  Aligned_cols=44  Identities=32%  Similarity=0.468  Sum_probs=30.8

Q ss_pred             hhhccccccccEEEEEcC------CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          122 TNILGQGAFGPVYKATMP------SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      .+.||+|+||.||+|...      .+..+|+|.++... .....+|.+|+.
T Consensus        11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~   61 (277)
T cd05062          11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS   61 (277)
T ss_pred             eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHH
Confidence            348999999999998763      24579999985432 223456777764

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5

Probab=93.44  E-value=0.022  Score=43.40  Aligned_cols=12  Identities=0%  Similarity=0.027  Sum_probs=0.0

Q ss_pred             HHHHHHHhhhhe
Q 031038           22 IATLVFFGLRWY   33 (167)
Q Consensus        22 ~i~~~~~~~~~~   33 (167)
                      +++.+++|+|.|
T Consensus       160 LIA~iIa~icyr  171 (290)
T PF05454_consen  160 LIAGIIACICYR  171 (290)
T ss_dssp             ------------
T ss_pred             HHHHHHHHHhhh
Confidence            333333333333

5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.

>PF06365 CD34_antigen: CD34/Podocalyxin family; InterPro: IPR013836 This family consists of several mammalian CD34 antigen proteins

Probab=93.40  E-value=0.37  Score=34.83  Aligned_cols=25  Identities=12%  Similarity=-0.085  Sum_probs=11.6

Q ss_pred             eeehhhHHHHHHHHHHHHHHHhhhh
Q 031038            8 VIIGICVGLALGILIATLVFFGLRW   32 (167)
Q Consensus         8 ~ii~ii~g~~~~v~~i~~~~~~~~~   32 (167)
                      ++|++++...++++++++...|+|+
T Consensus       101 ~lI~lv~~g~~lLla~~~~~~Y~~~  125 (202)
T PF06365_consen  101 TLIALVTSGSFLLLAILLGAGYCCH  125 (202)
T ss_pred             EEEehHHhhHHHHHHHHHHHHHHhh
Confidence            5555555553334444444434443

The CD34 antigen is a human leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. CD34 is a phosphoprotein. Activation of protein kinase C (PKC) has been found to enhance CD34 phosphorylation [, ]. This family contains several eukaryotic podocalyxin proteins. Podocalyxin is a major membrane protein of the glomerular epithelium and is thought to be involved in maintenance of the architecture of the foot processes and filtration slits characteristic of this unique epithelium by virtue of its high negative charge. Podocalyxin functions as an anti-adhesin that maintains an open filtration pathway between neighbouring foot processes in the glomerular epithelium by charge repulsion [].

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=93.39  E-value=0.1  Score=39.22  Aligned_cols=43  Identities=33%  Similarity=0.526  Sum_probs=30.7

Q ss_pred             hhccccccccEEEEEcCC------CcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS------GGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~------g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||++...+      ...+|+|.+.... .....+|.+|++
T Consensus        18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~   67 (293)
T cd05053          18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEME   67 (293)
T ss_pred             eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHH
Confidence            589999999999998732      3578999986532 223356777764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=93.38  E-value=0.17  Score=39.53  Aligned_cols=43  Identities=28%  Similarity=0.169  Sum_probs=30.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- ..+..+|||.+....  .....++.+|+.
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~   75 (364)
T cd07875          30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELV   75 (364)
T ss_pred             EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHH
Confidence            5899999999999986 457889999996422  222345655553

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=93.36  E-value=0.2  Score=43.23  Aligned_cols=29  Identities=34%  Similarity=0.610  Sum_probs=23.7

Q ss_pred             hhcccccccc-EEEEEcCCCcEEEEEEeccC
Q 031038          123 NILGQGAFGP-VYKATMPSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~-vy~g~l~~g~~vavk~l~~~  152 (167)
                      +++|.|.-|+ ||+|++ +|+.||||++-..
T Consensus       515 eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e  544 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVY-EGREVAVKRLLEE  544 (903)
T ss_pred             HHcccCCCCcEEEEEee-CCceehHHHHhhH
Confidence            4788887765 899999 7799999999443

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=93.34  E-value=0.026  Score=45.62  Aligned_cols=29  Identities=41%  Similarity=0.692  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||.|.||.||+|+- ..|..||||+++.
T Consensus        16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~   45 (538)
T KOG0661|consen   16 RKLGDGTFGSVYLAKSKETGELVAIKKMKK   45 (538)
T ss_pred             HHhcCCcceeEEEeeecCCCceeeHHHHHh
Confidence            4899999999999987 5678899999954

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=93.33  E-value=0.11  Score=43.98  Aligned_cols=45  Identities=31%  Similarity=0.484  Sum_probs=33.3

Q ss_pred             hhhccccccccEEEEEcC----C----CcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          122 TNILGQGAFGPVYKATMP----S----GGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l~----~----g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      ...+|+|.||.|++|.+.    .    ...||||.++... ..+.+.|..|+++
T Consensus       301 ~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~  354 (609)
T KOG0200|consen  301 GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNV  354 (609)
T ss_pred             cceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHH
Confidence            348999999999999872    1    3479999997643 3345778887753

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=93.32  E-value=0.16  Score=38.62  Aligned_cols=29  Identities=38%  Similarity=0.686  Sum_probs=25.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      +.||+|.||.||+|.. .+|..||+|.++.
T Consensus        13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~   42 (309)
T cd07845          13 NRIGEGTYGIVYRARDTTSGEIVALKKVRM   42 (309)
T ss_pred             eeeeecCCEEEEEEEECCCCcEEEEEEEEe
Confidence            3899999999999998 4688999999854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=93.25  E-value=0.14  Score=38.82  Aligned_cols=43  Identities=30%  Similarity=0.459  Sum_probs=30.6

Q ss_pred             hhccccccccEEEEEc------CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM------PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++..      ..+..+|||.++... ....+.|.+|+.
T Consensus        41 ~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   90 (302)
T cd05055          41 KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELK   90 (302)
T ss_pred             ceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHH
Confidence            6899999999999974      124479999986543 222356777764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=93.24  E-value=0.15  Score=38.05  Aligned_cols=43  Identities=42%  Similarity=0.651  Sum_probs=30.8

Q ss_pred             hhccccccccEEEEEcCC-Cc----EEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS-GG----VAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~-g~----~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|...+ |.    .+|+|.+.... .....+|..|+.
T Consensus        13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~   61 (279)
T cd05057          13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAY   61 (279)
T ss_pred             ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHH
Confidence            489999999999999742 32    58999886543 233456777764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=93.23  E-value=0.16  Score=40.50  Aligned_cols=43  Identities=33%  Similarity=0.492  Sum_probs=32.7

Q ss_pred             hhccccccccEEEEEcCC-CcEEEEEEeccCCcc---cHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS-GGVAAIKVLASDSHQ---GEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~-g~~vavk~l~~~~~~---~~~~F~~e~~  165 (167)
                      ..||.|.||.||+.+-.. |..+|+|.+......   ......+|+.
T Consensus        41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~   87 (382)
T KOG0032|consen   41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVA   87 (382)
T ss_pred             hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHH
Confidence            589999999999999865 899999999553322   2356666664

>PHA03265 envelope glycoprotein D; Provisional

Probab=93.22  E-value=0.027  Score=43.54  Aligned_cols=32  Identities=31%  Similarity=0.423  Sum_probs=15.4

Q ss_pred             CCcceeehhhHHHHHHHHHHHHHHHhhhheec
Q 031038            4 KSDLVIIGICVGLALGILIATLVFFGLRWYKK   35 (167)
Q Consensus         4 ~s~~~ii~ii~g~~~~v~~i~~~~~~~~~~r~   35 (167)
                      .+++..+|+++|..++-++++-+++++|+|||
T Consensus       344 ~~~~~~~g~~ig~~i~glv~vg~il~~~~rr~  375 (402)
T PHA03265        344 KSNSTFVGISVGLGIAGLVLVGVILYVCLRRK  375 (402)
T ss_pred             CCCCcccceEEccchhhhhhhhHHHHHHhhhh
Confidence            34555666666655544444333344444333

>PF15050 SCIMP: SCIMP protein

Probab=93.18  E-value=0.087  Score=34.43  Aligned_cols=22  Identities=9%  Similarity=0.285  Sum_probs=11.9

Q ss_pred             HHHHHHHHHHHHHhhhheeccc
Q 031038           16 LALGILIATLVFFGLRWYKKHD   37 (167)
Q Consensus        16 ~~~~v~~i~~~~~~~~~~r~~~   37 (167)
                      ++++-+.+.++++|.||+..|+
T Consensus        16 II~vS~~lglIlyCvcR~~lRq   37 (133)
T PF15050_consen   16 IILVSVVLGLILYCVCRWQLRQ   37 (133)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc
Confidence            3444455566666666654433

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=93.17  E-value=0.024  Score=32.85  Aligned_cols=32  Identities=28%  Similarity=0.413  Sum_probs=0.5

Q ss_pred             CCcceeehhhHHHHHHHHHHHHHHHhhhheecc
Q 031038            4 KSDLVIIGICVGLALGILIATLVFFGLRWYKKH   36 (167)
Q Consensus         4 ~s~~~ii~ii~g~~~~v~~i~~~~~~~~~~r~~   36 (167)
                      .-.++|+|+++|++++++++++++..+ |+|..
T Consensus        10 vlaavIaG~Vvgll~ailLIlf~iyR~-rkkdE   41 (64)
T PF01034_consen   10 VLAAVIAGGVVGLLFAILLILFLIYRM-RKKDE   41 (64)
T ss_dssp             ----------------------------S----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCC
Confidence            346788999988888777665555544 55543

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=93.12  E-value=0.098  Score=43.27  Aligned_cols=34  Identities=24%  Similarity=0.352  Sum_probs=29.4

Q ss_pred             hhh-hhccccccccEEEEEcCCCcEEEEEEeccCC
Q 031038          120 NFT-NILGQGAFGPVYKATMPSGGVAAIKVLASDS  153 (167)
Q Consensus       120 ~f~-~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~  153 (167)
                      +|+ .-++.++.|.||+|++.+|+.||||...++-
T Consensus       127 eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi  161 (517)
T COG0661         127 EFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGI  161 (517)
T ss_pred             HcCCCchhhhhHhhheeEEecCCCEEEEEecCCCh
Confidence            454 6788999999999999999999999997653

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=93.11  E-value=0.17  Score=38.37  Aligned_cols=43  Identities=30%  Similarity=0.434  Sum_probs=30.1

Q ss_pred             hhccccccccEEEEEcC--------CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP--------SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~--------~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++...        ....+|+|.++... .....+|..|++
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~   75 (307)
T cd05098          24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEME   75 (307)
T ss_pred             eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHH
Confidence            68999999999999752        23469999997542 223355666654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=93.09  E-value=0.085  Score=43.20  Aligned_cols=29  Identities=38%  Similarity=0.685  Sum_probs=25.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||.+.- ..|...|+|+|+.
T Consensus       147 k~IgkGAfGeVrLarKk~Tg~iyAmK~LkK  176 (550)
T KOG0605|consen  147 KVIGKGAFGEVRLARKKDTGEIYAMKILKK  176 (550)
T ss_pred             eeeccccceeEEEEEEccCCcEEeeecccH
Confidence            5899999999999987 4578899999954

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=93.07  E-value=0.13  Score=39.99  Aligned_cols=43  Identities=28%  Similarity=0.328  Sum_probs=30.1

Q ss_pred             hhccccccccEEEEEcCC--CcEEEEEEeccC---CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS--GGVAAIKVLASD---SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~--g~~vavk~l~~~---~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|...+  +..+|+|.+...   .....+.|..|++
T Consensus        36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~   83 (340)
T PTZ00426         36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERK   83 (340)
T ss_pred             EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHH
Confidence            589999999999998743  357999998532   1222345666654

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=93.06  E-value=0.17  Score=37.56  Aligned_cols=43  Identities=33%  Similarity=0.482  Sum_probs=30.9

Q ss_pred             hhccccccccEEEEEcCC------CcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS------GGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~------g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|...+      +..+|+|.+.... .....+|..|+.
T Consensus        12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~   61 (277)
T cd05032          12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEAS   61 (277)
T ss_pred             eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHH
Confidence            489999999999998742      3579999986443 233456777664

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=93.05  E-value=0.15  Score=38.67  Aligned_cols=43  Identities=42%  Similarity=0.710  Sum_probs=29.6

Q ss_pred             hhccccccccEEEEEc-CCCc----EEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGG----VAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~----~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|.. .+|.    .+|+|.+..... ....+|..|+.
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~   61 (303)
T cd05110          13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL   61 (303)
T ss_pred             cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHH
Confidence            4899999999999987 3443    478998865432 22346666654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=92.99  E-value=0.21  Score=38.82  Aligned_cols=43  Identities=28%  Similarity=0.182  Sum_probs=30.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- ..+..+|+|.+....  ......+.+|+.
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~   68 (355)
T cd07874          23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV   68 (355)
T ss_pred             EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHH
Confidence            5899999999999976 357889999996432  222345555553

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=92.88  E-value=0.22  Score=37.54  Aligned_cols=29  Identities=45%  Similarity=0.729  Sum_probs=25.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|.||.||++.. .++..+++|.+..
T Consensus        14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~   43 (311)
T cd07866          14 GKLGEGTFGEVYKARQIKTGRVVALKKILM   43 (311)
T ss_pred             EEeccCCCEEEEEEEECCCCcEEEEEEEEe
Confidence            5899999999999997 4678999999854

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=92.76  E-value=0.086  Score=39.46  Aligned_cols=45  Identities=27%  Similarity=0.434  Sum_probs=36.0

Q ss_pred             hhccccccccEEEEE-cCCCcEEEEEEeccCCcccHHHHHHHHhhC
Q 031038          123 NILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVRAH  167 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~-l~~g~~vavk~l~~~~~~~~~~F~~e~~~~  167 (167)
                      ..+|+|+|..||.++ +.++...|+|++...+..+.+.-++|++.|
T Consensus        27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~   72 (302)
T KOG2345|consen   27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNH   72 (302)
T ss_pred             eeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHH
Confidence            589999999999887 567788999999776656667777777643

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=92.75  E-value=0.14  Score=37.73  Aligned_cols=29  Identities=34%  Similarity=0.547  Sum_probs=26.1

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++..+++..+|+|.+..
T Consensus        12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~   40 (260)
T cd05070          12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKP   40 (260)
T ss_pred             heeccccCceEEEEEecCCceeEEEEecC
Confidence            38999999999999998888999999965

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=92.54  E-value=0.26  Score=37.59  Aligned_cols=43  Identities=33%  Similarity=0.510  Sum_probs=30.7

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcc---cHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQ---GEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~---~~~~F~~e~~  165 (167)
                      +.+|+|+||.||+|.. ..+..+++|.+......   ...++..|++
T Consensus        27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~   73 (313)
T cd06633          27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVK   73 (313)
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHH
Confidence            4699999999999987 46788999998643221   2245666653

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=92.50  E-value=0.15  Score=37.76  Aligned_cols=29  Identities=41%  Similarity=0.533  Sum_probs=25.5

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||+|...+...||+|.++.
T Consensus        12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~   40 (262)
T cd05071          12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP   40 (262)
T ss_pred             eecCCCCCCcEEEEEecCCceEEEEeccc
Confidence            37899999999999987767899999965

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=92.45  E-value=0.12  Score=46.41  Aligned_cols=30  Identities=37%  Similarity=0.547  Sum_probs=25.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      .+||+|+||.|||..= -||...|||++...
T Consensus       485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~  515 (1351)
T KOG1035|consen  485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLK  515 (1351)
T ss_pred             HHhcCCCCceEEEEeecccchhhhhhhccCc
Confidence            5899999999999964 28899999999654

>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ]

Probab=92.44  E-value=0.1  Score=35.34  Aligned_cols=26  Identities=19%  Similarity=0.244  Sum_probs=12.4

Q ss_pred             ehhhHHHHHHHHHHHHHHHhhhheec
Q 031038           10 IGICVGLALGILIATLVFFGLRWYKK   35 (167)
Q Consensus        10 i~ii~g~~~~v~~i~~~~~~~~~~r~   35 (167)
                      +.|++++++.++++++++.+|.+|+|
T Consensus        32 ~tILiaIvVliiiiivli~lcssRKk   57 (189)
T PF05568_consen   32 YTILIAIVVLIIIIIVLIYLCSSRKK   57 (189)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhH
Confidence            44566666655444444444333333

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=92.44  E-value=0.28  Score=37.30  Aligned_cols=43  Identities=33%  Similarity=0.492  Sum_probs=31.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      +.||+|.||.||+|.. .++..+++|.+....   .....+|..|++
T Consensus        21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~   67 (308)
T cd06634          21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR   67 (308)
T ss_pred             HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHH
Confidence            4899999999999997 467789999985422   122345666654

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>PF15069 FAM163: FAM163 family

Probab=92.43  E-value=0.17  Score=34.30  Aligned_cols=20  Identities=5%  Similarity=0.139  Sum_probs=9.0

Q ss_pred             hHHHHHHHHHH-HHHHHhhhh
Q 031038           13 CVGLALGILIA-TLVFFGLRW   32 (167)
Q Consensus        13 i~g~~~~v~~i-~~~~~~~~~   32 (167)
                      ..|++++|+++ +++++|+||
T Consensus         9 tGgILAtVILLcIIaVLCYCR   29 (143)
T PF15069_consen    9 TGGILATVILLCIIAVLCYCR   29 (143)
T ss_pred             echHHHHHHHHHHHHHHHHHh
Confidence            34455444444 334444444

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=92.41  E-value=0.3  Score=36.77  Aligned_cols=29  Identities=34%  Similarity=0.581  Sum_probs=25.1

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ..||+|.||.||++... ++..+|+|.+..
T Consensus        18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~   47 (310)
T cd07865          18 AKIGQGTFGEVFKARHKKTKQIVALKKVLM   47 (310)
T ss_pred             EEeecCCCEEEEEEEECCCCcEEEEEEEec
Confidence            58999999999999874 688999999854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=92.34  E-value=0.28  Score=37.77  Aligned_cols=42  Identities=29%  Similarity=0.392  Sum_probs=29.9

Q ss_pred             hccccccccEEEEEcC-CCcEEEEEEeccC--CcccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATMP-SGGVAAIKVLASD--SHQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~-~g~~vavk~l~~~--~~~~~~~F~~e~~  165 (167)
                      .||+|.||.||+|... ++..+++|++...  .......+..|+.
T Consensus        14 ~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~   58 (337)
T cd07852          14 KLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIM   58 (337)
T ss_pred             hhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHH
Confidence            8999999999999974 5788999998432  1222344555553

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PF15102 TMEM154: TMEM154 protein family

Probab=92.20  E-value=0.096  Score=35.63  Aligned_cols=16  Identities=31%  Similarity=0.384  Sum_probs=7.1

Q ss_pred             eehhhHHHHHHHHHHH
Q 031038            9 IIGICVGLALGILIAT   24 (167)
Q Consensus         9 ii~ii~g~~~~v~~i~   24 (167)
                      ++.|+++.++++++++
T Consensus        58 iLmIlIP~VLLvlLLl   73 (146)
T PF15102_consen   58 ILMILIPLVLLVLLLL   73 (146)
T ss_pred             EEEEeHHHHHHHHHHH
Confidence            4445555444433333

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=92.19  E-value=0.24  Score=37.53  Aligned_cols=43  Identities=28%  Similarity=0.468  Sum_probs=30.0

Q ss_pred             hhccccccccEEEEEc--------CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM--------PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l--------~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++..        .++..+++|.++... .....++..|+.
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~   72 (304)
T cd05101          21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME   72 (304)
T ss_pred             ceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHH
Confidence            5899999999999974        123479999986432 233456666654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=92.18  E-value=0.3  Score=37.93  Aligned_cols=43  Identities=30%  Similarity=0.264  Sum_probs=31.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC--CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD--SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~--~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .+|..+|+|.+...  ......++..|+.
T Consensus        22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~   67 (353)
T cd07850          22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELV   67 (353)
T ss_pred             EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHH
Confidence            5899999999999986 46889999998542  1222345656653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=91.84  E-value=0.071  Score=41.09  Aligned_cols=40  Identities=40%  Similarity=0.569  Sum_probs=30.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      ..||+|+||.|||+.- +.|+.+|+|.+.-.+.  ..+...|+
T Consensus        39 ~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD--LQEIIKEI   79 (502)
T KOG0574|consen   39 GKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD--LQEIIKEI   79 (502)
T ss_pred             HHhcCCcchHHHHHHHhccCcEEEEEecCccch--HHHHHHHH
Confidence            4899999999999987 5789999999855432  33444444

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=91.83  E-value=0.17  Score=37.27  Aligned_cols=32  Identities=34%  Similarity=0.503  Sum_probs=26.8

Q ss_pred             hhhccccccccEEEEEcCCCcEEEEEEeccCC
Q 031038          122 TNILGQGAFGPVYKATMPSGGVAAIKVLASDS  153 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~  153 (167)
                      .+.||+|+||.||++...++..+++|.+....
T Consensus        11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~   42 (260)
T cd05073          11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS   42 (260)
T ss_pred             EeEecCccceEEEEEEecCCccEEEEecCCCh
Confidence            34899999999999998777889999886533

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>PF07204 Orthoreo_P10: Orthoreovirus membrane fusion protein p10; InterPro: IPR009854 This family consists of several Orthoreovirus membrane fusion protein p10 sequences

Probab=91.63  E-value=0.081  Score=33.00  Aligned_cols=11  Identities=9%  Similarity=-0.018  Sum_probs=4.4

Q ss_pred             HHHHhhhheec
Q 031038           25 LVFFGLRWYKK   35 (167)
Q Consensus        25 ~~~~~~~~~r~   35 (167)
                      +.++|+||.|+
T Consensus        58 i~Lv~CC~~K~   68 (98)
T PF07204_consen   58 IALVCCCRAKH   68 (98)
T ss_pred             HHHHHHhhhhh
Confidence            33444444333

p10 is thought to be a multifunctional protein that plays a key role in virus-host interaction [].

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=91.56  E-value=0.34  Score=36.36  Aligned_cols=31  Identities=35%  Similarity=0.597  Sum_probs=26.5

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS  153 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~  153 (167)
                      ..||.|+||.+|.|.- .+|..||+|.-+...
T Consensus        21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a   52 (341)
T KOG1163|consen   21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKA   52 (341)
T ss_pred             EeecCCchhheeeeeeccCCceEEEEeecccC
Confidence            6899999999999976 789999999875543

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=91.56  E-value=0.24  Score=36.48  Aligned_cols=29  Identities=41%  Similarity=0.536  Sum_probs=25.4

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      ..||+|++|.||++...++..+++|.+..
T Consensus        12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~   40 (260)
T cd05069          12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKP   40 (260)
T ss_pred             eeecCcCCCeEEEEEEcCCceEEEEEccc
Confidence            37999999999999997777899998864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=91.47  E-value=0.37  Score=36.73  Aligned_cols=43  Identities=26%  Similarity=0.460  Sum_probs=30.1

Q ss_pred             hhccccccccEEEEEc--------CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM--------PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l--------~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|.||.||++..        .....+|+|.++... .....+|..|++
T Consensus        18 ~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~   69 (314)
T cd05099          18 KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEME   69 (314)
T ss_pred             eeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHH
Confidence            5899999999999964        124568999986532 233456767764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA02882 putative serine/threonine kinase; Provisional

Probab=91.31  E-value=0.19  Score=38.00  Aligned_cols=27  Identities=33%  Similarity=0.581  Sum_probs=20.5

Q ss_pred             hhccccccccEEEEEcCCC----cEEEEEEe
Q 031038          123 NILGQGAFGPVYKATMPSG----GVAAIKVL  149 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g----~~vavk~l  149 (167)
                      +.||+|+||.||+|...+.    ..+++|..
T Consensus        18 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~   48 (294)
T PHA02882         18 KLIGCGGFGCVYETQCASDHCINNQAVAKIE   48 (294)
T ss_pred             eEEecCCCceEEEEEEcCCcccccceEEEec
Confidence            5899999999999998543    34566653

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=91.18  E-value=0.3  Score=40.80  Aligned_cols=31  Identities=39%  Similarity=0.717  Sum_probs=26.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS  153 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~  153 (167)
                      ++||+|.||.|.++.= ..++.||||.+++..
T Consensus       192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k  223 (586)
T KOG0667|consen  192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK  223 (586)
T ss_pred             EEecccccceeEEEEecCCCcEEEEEeeccCh
Confidence            6899999999999975 457899999997754

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=91.13  E-value=0.3  Score=32.74  Aligned_cols=21  Identities=19%  Similarity=0.232  Sum_probs=12.2

Q ss_pred             HHHHHHHHHhhhheecccCcc
Q 031038           20 ILIATLVFFGLRWYKKHDHFR   40 (167)
Q Consensus        20 v~~i~~~~~~~~~~r~~~~~~   40 (167)
                      |+++++++|+++|+++||+++
T Consensus         9 i~~i~l~~~~~~~~~rRR~r~   29 (130)
T PF12273_consen    9 IVAILLFLFLFYCHNRRRRRR   29 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHhhc
Confidence            334444555566677777764

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=91.12  E-value=0.54  Score=34.56  Aligned_cols=41  Identities=34%  Similarity=0.644  Sum_probs=31.2

Q ss_pred             hccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      .||+|.+|.||+|... ++..+++|.+..... ..++|..|+.
T Consensus        13 ~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~   54 (275)
T cd06608          13 VIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYN   54 (275)
T ss_pred             eecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHH
Confidence            8999999999999984 567899999865432 3356766664

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=91.06  E-value=0.41  Score=37.05  Aligned_cols=43  Identities=33%  Similarity=0.373  Sum_probs=30.8

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||+|... ++..+|+|.+....  ......+..|+.
T Consensus        21 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~   66 (343)
T cd07851          21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELR   66 (343)
T ss_pred             EEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHH
Confidence            58999999999999984 57889999985421  222344555553

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PF14851 FAM176: FAM176 family

Probab=90.82  E-value=3.4  Score=28.59  Aligned_cols=20  Identities=15%  Similarity=0.333  Sum_probs=10.8

Q ss_pred             ehhhHHHHHHHHHHHHHHHh
Q 031038           10 IGICVGLALGILIATLVFFG   29 (167)
Q Consensus        10 i~ii~g~~~~v~~i~~~~~~   29 (167)
                      +..++|+++++++.+++++.
T Consensus        24 LYFv~gVC~GLlLtLcllV~   43 (153)
T PF14851_consen   24 LYFVSGVCAGLLLTLCLLVI   43 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            44566666665555444443

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=90.67  E-value=0.46  Score=36.56  Aligned_cols=43  Identities=28%  Similarity=0.435  Sum_probs=29.7

Q ss_pred             hhccccccccEEEEEcC--------CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP--------SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~--------~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...        .+..+|+|.++... .....+|..|+.
T Consensus        18 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~   69 (334)
T cd05100          18 KPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEME   69 (334)
T ss_pred             ceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHH
Confidence            58999999999999741        12368999886532 223456777664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=90.67  E-value=0.9  Score=34.81  Aligned_cols=38  Identities=26%  Similarity=0.492  Sum_probs=29.2

Q ss_pred             CHHHHHHHhhhhhhhccccccccEEEEEcC-CCcEEEEEEeccC
Q 031038          110 AYKDIQKATQNFTNILGQGAFGPVYKATMP-SGGVAAIKVLASD  152 (167)
Q Consensus       110 ~~~~l~~~~~~f~~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~  152 (167)
                      ...||+...     .+|.|..|.|++.++. .|..+|||.+...
T Consensus        90 dindl~~l~-----dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt  128 (391)
T KOG0983|consen   90 DINDLENLG-----DLGSGTCGQVWKMRFRSTGHIIAVKQMRRT  128 (391)
T ss_pred             ChHHhhhHH-----hhcCCCccceEEEEEcccceEEEEEeeccc
Confidence            445554333     7899999999999995 4788999999553

>PF12191 stn_TNFRSF12A: Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain; InterPro: IPR022316 The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins

Probab=90.25  E-value=0.1  Score=34.43  Aligned_cols=13  Identities=15%  Similarity=0.350  Sum_probs=0.0

Q ss_pred             HHHhhhheecccC
Q 031038           26 VFFGLRWYKKHDH   38 (167)
Q Consensus        26 ~~~~~~~~r~~~~   38 (167)
                      .+++|+|+|||++
T Consensus        97 g~lv~rrcrrr~~  109 (129)
T PF12191_consen   97 GFLVWRRCRRREK  109 (129)
T ss_dssp             -------------
T ss_pred             HHHHHhhhhcccc
Confidence            4444444444333

Family members are defined based on similarity in their extracellular domain - a region that contains many cysteine residues arranged in a specific repetitive pattern []. The cysteines allow formation of an extended rod-like structure, responsible for ligand binding []. Upon receptor activation, different intracellular signalling complexes are assembled for different members of the TNFR superfamily, depending on their intracellular domains and sequences []. Activation of TNFRs can therefore induce a range of disparate effects, including cell proliferation, differentiation, survival, or apoptotic cell death, depending upon the receptor involved []. TNFRs are widely distributed and play important roles in many crucial biological processes, such as lymphoid and neuronal development, innate and adaptive immunity, and maintenance of cellular homeostasis []. Drugs that manipulate their signalling have potential roles in the prevention and treatment of many diseases, such as viral infections, coronary heart disease, transplant rejection, and immune disease []. TNF receptor 12 (also known as TWEAK receptor, and fibroblast growth factor-inducible-14 (Fn14)) has been implicated in endothelial cell growth and migration []. The receptor may also play a role in cell-matrix interactions [].; PDB: 2KN0_A 2RPJ_A 2KMZ_A 2EQP_A.

>PF15069 FAM163: FAM163 family

Probab=90.01  E-value=3.2  Score=28.21  Aligned_cols=23  Identities=30%  Similarity=0.405  Sum_probs=12.8

Q ss_pred             ceeehhhHH-HHHHHHHHHHHHHh
Q 031038            7 LVIIGICVG-LALGILIATLVFFG   29 (167)
Q Consensus         7 ~~ii~ii~g-~~~~v~~i~~~~~~   29 (167)
                      .+|.|.|++ ++++.+++++..+.
T Consensus         6 vVItGgILAtVILLcIIaVLCYCR   29 (143)
T PF15069_consen    6 VVITGGILATVILLCIIAVLCYCR   29 (143)
T ss_pred             EEEechHHHHHHHHHHHHHHHHHh
Confidence            345554444 44556666666554

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=89.58  E-value=0.067  Score=45.22  Aligned_cols=44  Identities=36%  Similarity=0.542  Sum_probs=33.1

Q ss_pred             hhccccccccEEEEEcCC-CcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPS-GGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~-g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||.|+||.|||++-.+ +...|-|.+...+....++|+-||++
T Consensus        38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeI   82 (1187)
T KOG0579|consen   38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEI   82 (1187)
T ss_pred             hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhh
Confidence            378999999999998854 34457788866655566788888764

>PHA03209 serine/threonine kinase US3; Provisional

Probab=89.44  E-value=0.54  Score=36.69  Aligned_cols=29  Identities=28%  Similarity=0.369  Sum_probs=24.1

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ..||+|.||.||+|... .+..||+|....
T Consensus        72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~  101 (357)
T PHA03209         72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQK  101 (357)
T ss_pred             EEecCCCCeEEEEEEECCCCceEEEEeCCc
Confidence            78999999999999984 456899997543

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=89.39  E-value=0.57  Score=37.16  Aligned_cols=29  Identities=38%  Similarity=0.575  Sum_probs=24.7

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|.||.||.|.- ..|..||+|.++.
T Consensus        23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~   52 (370)
T KOG0583|consen   23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDR   52 (370)
T ss_pred             eeecCCCCeeEEEeeeccCCCeEEEEEech
Confidence            5899999999999966 5679999997654

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=89.07  E-value=0.7  Score=41.36  Aligned_cols=44  Identities=18%  Similarity=0.345  Sum_probs=32.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~~  166 (167)
                      ..||+|.||.||++.. ..+..+|+|.+....  ......|..|+.+
T Consensus        19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~I   65 (1021)
T PTZ00266         19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNV   65 (1021)
T ss_pred             EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHH
Confidence            5899999999999987 456788999885432  2234567777643

>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis

Probab=88.90  E-value=0.36  Score=28.38  Aligned_cols=28  Identities=21%  Similarity=0.351  Sum_probs=16.2

Q ss_pred             cceeehhhHHHHHHHHHHHHHHHhhhhee
Q 031038            6 DLVIIGICVGLALGILIATLVFFGLRWYK   34 (167)
Q Consensus         6 ~~~ii~ii~g~~~~v~~i~~~~~~~~~~r   34 (167)
                      .|..||++.|++++++-. +.-+++.+++
T Consensus        32 qW~aIGvi~gi~~~~lt~-ltN~YFK~k~   59 (68)
T PF04971_consen   32 QWAAIGVIGGIFFGLLTY-LTNLYFKIKE   59 (68)
T ss_pred             cchhHHHHHHHHHHHHHH-HhHhhhhhhH
Confidence            577888887776655443 3334444333

The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=88.89  E-value=0.63  Score=37.70  Aligned_cols=42  Identities=31%  Similarity=0.504  Sum_probs=32.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCccc-HHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQG-EKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~-~~~F~~e~  164 (167)
                      .+||.|.-+.||+|.. +-+..||||+++.+.... .++...|+
T Consensus        32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~   75 (516)
T KOG0582|consen   32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEV   75 (516)
T ss_pred             EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHH
Confidence            4899999999999977 667899999997654333 35555555

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=88.53  E-value=0.74  Score=37.61  Aligned_cols=43  Identities=12%  Similarity=0.171  Sum_probs=30.1

Q ss_pred             hhccccccccEEEEEcC-C-CcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-S-GGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~-g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      +.+|+|+||.||++.-. + +..|++|.+..........+..|++
T Consensus        73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~  117 (478)
T PTZ00267         73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELH  117 (478)
T ss_pred             EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHH
Confidence            58999999999999753 3 5678888775443333445666664

>PHA03212 serine/threonine kinase US3; Provisional

Probab=88.46  E-value=0.52  Score=37.48  Aligned_cols=28  Identities=18%  Similarity=0.116  Sum_probs=24.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEec
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLA  150 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~  150 (167)
                      ..||+|+||.||++.- ..+..||+|...
T Consensus        98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~  126 (391)
T PHA03212         98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQ  126 (391)
T ss_pred             EEEcCCCCeEEEEEEECCCCCEEEEechh
Confidence            6899999999999986 467899999764

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=88.37  E-value=0.46  Score=42.15  Aligned_cols=29  Identities=38%  Similarity=0.688  Sum_probs=26.1

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      ..+|+|+||.||+|.-.+|..||+|.=+.
T Consensus       704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P  732 (974)
T KOG1166|consen  704 KEIGEGSYGSVYVATHSNGKLVALKVEKP  732 (974)
T ss_pred             eeeccccceEEEEeecCCCcEEEEEeecC
Confidence            68999999999999998899999997644

>PHA03211 serine/threonine kinase US3; Provisional

Probab=87.94  E-value=0.65  Score=37.96  Aligned_cols=27  Identities=22%  Similarity=0.295  Sum_probs=23.2

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEe
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVL  149 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l  149 (167)
                      ..||+|+||.||++... .+..||||..
T Consensus       175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~  202 (461)
T PHA03211        175 RALTPGSEGCVFESSHPDYPQRVVVKAG  202 (461)
T ss_pred             EEEccCCCeEEEEEEECCCCCEEEEecc
Confidence            67899999999999985 4678999964

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=87.86  E-value=0.57  Score=36.67  Aligned_cols=27  Identities=37%  Similarity=0.544  Sum_probs=24.4

Q ss_pred             hccccccccEEEEEc-CCCcEEEEEEec
Q 031038          124 ILGQGAFGPVYKATM-PSGGVAAIKVLA  150 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l-~~g~~vavk~l~  150 (167)
                      .||+|.||.|..+.- .+|..||+|++.
T Consensus        29 ~iG~GAyGvVcsA~~~~t~~~VAIKKi~   56 (359)
T KOG0660|consen   29 PIGRGAYGVVCSAKDKRTGEKVAIKKIL   56 (359)
T ss_pred             cccCcceeeEEEEEEcCCCCEeehhhhh
Confidence            799999999999987 578999999995

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=87.86  E-value=1  Score=33.17  Aligned_cols=42  Identities=31%  Similarity=0.468  Sum_probs=30.4

Q ss_pred             hccccccccEEEEEc-CCCcEEEEEEecc-CCcccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATM-PSGGVAAIKVLAS-DSHQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l-~~g~~vavk~l~~-~~~~~~~~F~~e~~  165 (167)
                      .||+|++|.|-+-+. ++|...|||++.. .+.+..+..+.|+.
T Consensus        53 elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dld   96 (282)
T KOG0984|consen   53 ELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLD   96 (282)
T ss_pred             hhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhh
Confidence            789999999877766 6899999999965 22333445555543

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=87.42  E-value=0.48  Score=31.42  Aligned_cols=14  Identities=14%  Similarity=0.470  Sum_probs=6.0

Q ss_pred             ehhhHHHHHHHHHH
Q 031038           10 IGICVGLALGILIA   23 (167)
Q Consensus        10 i~ii~g~~~~v~~i   23 (167)
                      .+.++++++++++.
T Consensus        63 ~~~i~~Ii~gv~aG   76 (122)
T PF01102_consen   63 EPAIIGIIFGVMAG   76 (122)
T ss_dssp             -TCHHHHHHHHHHH
T ss_pred             ccceeehhHHHHHH
Confidence            34445555544433

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=87.23  E-value=1  Score=37.44  Aligned_cols=24  Identities=29%  Similarity=0.433  Sum_probs=18.9

Q ss_pred             hhccccccccEEEEEcCCCcEEEEE
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIK  147 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk  147 (167)
                      +.||+|.||.||+|.+.+.. +++|
T Consensus       339 ~~iG~G~~g~Vy~~~~~~~~-~v~k  362 (535)
T PRK09605        339 HLIGKGAEADIKKGEYLGRD-AVIK  362 (535)
T ss_pred             ceeccCCcEEEEEEeecCcc-ceeE
Confidence            58999999999999996544 4444

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=86.89  E-value=0.37  Score=40.42  Aligned_cols=30  Identities=27%  Similarity=0.405  Sum_probs=25.6

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS  153 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~  153 (167)
                      .-||.|+-|.||.|.|.+ ..||||+++...
T Consensus       130 eWlGSGaQGAVF~Grl~n-etVAVKKV~elk  159 (904)
T KOG4721|consen  130 EWLGSGAQGAVFLGRLHN-ETVAVKKVRELK  159 (904)
T ss_pred             hhhccCcccceeeeeccC-ceehhHHHhhhh
Confidence            378999999999999955 799999986553

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=86.80  E-value=1.3  Score=36.86  Aligned_cols=49  Identities=18%  Similarity=0.351  Sum_probs=37.5

Q ss_pred             CCCCccCHHHHHHHh------------hhhh-hhccccccccEEEEEcCCCcEEEEEEeccC
Q 031038          104 SGIPRYAYKDIQKAT------------QNFT-NILGQGAFGPVYKATMPSGGVAAIKVLASD  152 (167)
Q Consensus       104 ~~~~~~~~~~l~~~~------------~~f~-~~lg~g~~g~vy~g~l~~g~~vavk~l~~~  152 (167)
                      +..+.++++|+....            ..|. .-|+.-++|.||++++.+|..||||.-.+.
T Consensus       135 D~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  135 DQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPG  196 (538)
T ss_pred             ccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcC
Confidence            345677777776553            2243 678889999999999999999999997554

>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells []

Probab=86.77  E-value=0.96  Score=27.67  Aligned_cols=13  Identities=23%  Similarity=0.258  Sum_probs=4.5

Q ss_pred             eehhhHHHHHHHH
Q 031038            9 IIGICVGLALGIL   21 (167)
Q Consensus         9 ii~ii~g~~~~v~   21 (167)
                      ++++++.++++++
T Consensus         6 i~~iialiv~~ii   18 (81)
T PF00558_consen    6 ILAIIALIVALII   18 (81)
T ss_dssp             --HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            3444444444333

; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.

>PF06809 NPDC1: Neural proliferation differentiation control-1 protein (NPDC1); InterPro: IPR009635 This family consists of several neural proliferation differentiation control-1 (NPDC1) proteins

Probab=86.59  E-value=0.73  Score=35.43  Aligned_cols=30  Identities=10%  Similarity=0.034  Sum_probs=17.4

Q ss_pred             eeehhhHHHHHHHHHHHHHHHhhhheeccc
Q 031038            8 VIIGICVGLALGILIATLVFFGLRWYKKHD   37 (167)
Q Consensus         8 ~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~   37 (167)
                      .++.|++.++++++.++++.+||||.+|..
T Consensus       199 ~lv~Iv~~cvaG~aAliva~~cW~Rlqr~~  228 (341)
T PF06809_consen  199 TLVLIVVCCVAGAAALIVAGYCWYRLQREI  228 (341)
T ss_pred             eeehhHHHHHHHHHHHHHhhheEEEecccc
Confidence            444555555556666666677777654433

NPDC1 plays a role in the control of neural cell proliferation and differentiation. It has been suggested that NPDC1 may be involved in the development of several secretion glands. This family also contains the C-terminal region of the Caenorhabditis elegans protein CAB-1 (Q93249 from SWISSPROT) which is known to interact with AEX-3 [].; GO: 0016021 integral to membrane

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=86.50  E-value=1.4  Score=33.60  Aligned_cols=18  Identities=28%  Similarity=0.362  Sum_probs=10.4

Q ss_pred             cCCcceeehhhHHHHHHH
Q 031038            3 HKSDLVIIGICVGLALGI   20 (167)
Q Consensus         3 ~~s~~~ii~ii~g~~~~v   20 (167)
                      +++.+.+++|-+++.+++
T Consensus       223 ~l~~G~VVlIslAiALG~  240 (281)
T PF12768_consen  223 KLSRGFVVLISLAIALGT  240 (281)
T ss_pred             cccceEEEEEehHHHHHH
Confidence            456666666666655433

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=86.34  E-value=0.76  Score=39.67  Aligned_cols=44  Identities=27%  Similarity=0.461  Sum_probs=31.6

Q ss_pred             hccccccccEEEEEcCCC-cEEEEEEeccCCcccHHHHHHHHhhC
Q 031038          124 ILGQGAFGPVYKATMPSG-GVAAIKVLASDSHQGEKEFQTEVRAH  167 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~~g-~~vavk~l~~~~~~~~~~F~~e~~~~  167 (167)
                      ++|+|.||+||-|.=.+. ..+|||-+............+||..|
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH  626 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALH  626 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHH
Confidence            689999999999986443 46899999654444445566666543

>PF03229 Alpha_GJ: Alphavirus glycoprotein J; InterPro: IPR004913 The exact function of the herpesvirus glycoprotein J is unknown, but it appears to play a role in the inhibition of apotosis of the host cell []

Probab=85.73  E-value=0.48  Score=30.82  Aligned_cols=24  Identities=13%  Similarity=0.113  Sum_probs=14.2

Q ss_pred             eeehhhHHHHHHHHHHHHHHHhhh
Q 031038            8 VIIGICVGLALGILIATLVFFGLR   31 (167)
Q Consensus         8 ~ii~ii~g~~~~v~~i~~~~~~~~   31 (167)
                      .++++++|.++++.+.++..+.+.
T Consensus        84 ~aLp~VIGGLcaL~LaamGA~~LL  107 (126)
T PF03229_consen   84 FALPLVIGGLCALTLAAMGAGALL  107 (126)
T ss_pred             cchhhhhhHHHHHHHHHHHHHHHH
Confidence            566777777766655555444443

; GO: 0019050 suppression by virus of host apoptosis

>PF15347 PAG: Phosphoprotein associated with glycosphingolipid-enriched

Probab=85.68  E-value=1.4  Score=34.78  Aligned_cols=35  Identities=17%  Similarity=0.271  Sum_probs=21.9

Q ss_pred             ceeehhhHHHHHHHHHHHHHHHhhhheecccCccc
Q 031038            7 LVIIGICVGLALGILIATLVFFGLRWYKKHDHFRR   41 (167)
Q Consensus         7 ~~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~~~~~   41 (167)
                      .+++|.+.++..++++-+++|+|-.|.|.+|.+.+
T Consensus        15 ivlwgsLaav~~f~lis~LifLCsSC~reKK~~~~   49 (428)
T PF15347_consen   15 IVLWGSLAAVTTFLLISFLIFLCSSCDREKKPKQQ   49 (428)
T ss_pred             EEeehHHHHHHHHHHHHHHHHHhhcccccccCCCC
Confidence            45667666666666666666777666665555433

>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A

Probab=85.59  E-value=1.4  Score=26.65  Aligned_cols=18  Identities=28%  Similarity=0.497  Sum_probs=7.4

Q ss_pred             ehhhHHHHHHHHHHHHHH
Q 031038           10 IGICVGLALGILIATLVF   27 (167)
Q Consensus        10 i~ii~g~~~~v~~i~~~~   27 (167)
                      +++++|++++++++++++
T Consensus         4 ~~~~~g~~~ll~~v~~~~   21 (75)
T PF14575_consen    4 ASIIVGVLLLLVLVIIVI   21 (75)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             ehHHHHHHHHHHhheeEE
Confidence            344444444333333333

...

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=85.55  E-value=1.4  Score=35.46  Aligned_cols=29  Identities=41%  Similarity=0.567  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|+||.|-+|.= ..|+.||||.++.
T Consensus       178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~k  207 (475)
T KOG0615|consen  178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINK  207 (475)
T ss_pred             eeecCCceeEEEEEEEcccCcEEEeeeeeh
Confidence            7899999999998866 5789999999954

>PHA03207 serine/threonine kinase US3; Provisional

Probab=85.48  E-value=1.3  Score=35.00  Aligned_cols=30  Identities=20%  Similarity=0.268  Sum_probs=24.0

Q ss_pred             hhccccccccEEEEEcC---CCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMP---SGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~---~g~~vavk~l~~~  152 (167)
                      ..||+|.||.||++...   .+..|++|.+...
T Consensus        98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~  130 (392)
T PHA03207         98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG  130 (392)
T ss_pred             EeecCCCCeEEEEEEEcCCccceeEEEEecccc
Confidence            68999999999999763   3467999988543

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=85.07  E-value=1.9  Score=32.02  Aligned_cols=29  Identities=17%  Similarity=0.068  Sum_probs=24.5

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~  152 (167)
                      +++|.|+||.||...- ++..+++|.+.+.
T Consensus        37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~   65 (232)
T PRK10359         37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPK   65 (232)
T ss_pred             EEecCCCceEEEEEec-CCCcEEEEEechh
Confidence            7899999999998666 5668999999653

>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function

Probab=84.99  E-value=0.62  Score=35.32  Aligned_cols=32  Identities=25%  Similarity=0.345  Sum_probs=16.7

Q ss_pred             cce-eehhhHHHHHHHHHHHHHHHhhhheeccc
Q 031038            6 DLV-IIGICVGLALGILIATLVFFGLRWYKKHD   37 (167)
Q Consensus         6 ~~~-ii~ii~g~~~~v~~i~~~~~~~~~~r~~~   37 (167)
                      .|. ++++++|+++++++.++++++.+.+|++|
T Consensus       212 ~W~iv~g~~~G~~~L~ll~~lv~~~vr~krk~k  244 (278)
T PF06697_consen  212 WWKIVVGVVGGVVLLGLLSLLVAMLVRYKRKKK  244 (278)
T ss_pred             eEEEEEEehHHHHHHHHHHHHHHhhhhhhHHHH
Confidence            344 55567777765555544444444444333

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=84.65  E-value=3.4  Score=30.58  Aligned_cols=27  Identities=26%  Similarity=0.390  Sum_probs=22.6

Q ss_pred             ccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          125 LGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       125 lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      +|+|.||.||++.- .++..+++|.+..
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~   51 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKA   51 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEeh
Confidence            49999999999987 4677889998854

>PLN03150 hypothetical protein; Provisional

Probab=84.63  E-value=0.8  Score=38.91  Aligned_cols=28  Identities=21%  Similarity=0.245  Sum_probs=15.4

Q ss_pred             CCcceeehhhHHHHHHHHHHHHHHHhhh
Q 031038            4 KSDLVIIGICVGLALGILIATLVFFGLR   31 (167)
Q Consensus         4 ~s~~~ii~ii~g~~~~v~~i~~~~~~~~   31 (167)
                      ++.+.++++++|++++++++++++++++
T Consensus       541 ~~~~~~i~~~~~~~~~~l~~~~~~~~~~  568 (623)
T PLN03150        541 LSVGAKIGIAFGVSVAFLFLVICAMCWW  568 (623)
T ss_pred             CCCceEEEEEhHHHHHHHHHHHHHhhhe
Confidence            3456677777777765444444333333

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=84.59  E-value=0.51  Score=36.96  Aligned_cols=29  Identities=34%  Similarity=0.763  Sum_probs=24.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ++||+|+||.||...- +.++..|+|.|+.
T Consensus        31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K   60 (357)
T KOG0598|consen   31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKK   60 (357)
T ss_pred             eeeeccCCceEEEEEEcccCceeehhhhhh
Confidence            5999999999998876 4567889999954

>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase

Probab=84.49  E-value=1.8  Score=22.66  Aligned_cols=10  Identities=20%  Similarity=-0.011  Sum_probs=4.5

Q ss_pred             CcCCcceeeh
Q 031038            2 VHKSDLVIIG   11 (167)
Q Consensus         2 ~~~s~~~ii~   11 (167)
                      +.++.+.|+.
T Consensus         4 s~lp~GVIlV   13 (43)
T PF08114_consen    4 STLPGGVILV   13 (43)
T ss_pred             ccCCCCeeee
Confidence            3445554433

Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=84.24  E-value=0.92  Score=36.24  Aligned_cols=31  Identities=39%  Similarity=0.541  Sum_probs=25.8

Q ss_pred             hhccccccccEEEEEcC----CCcEEEEEEeccCC
Q 031038          123 NILGQGAFGPVYKATMP----SGGVAAIKVLASDS  153 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~----~g~~vavk~l~~~~  153 (167)
                      +.||+|.|+.||++++.    ....||+|.+...+
T Consensus        42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts   76 (418)
T KOG1167|consen   42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS   76 (418)
T ss_pred             ccccccchhhhhhhhHhhhccccceEeeeeccccc
Confidence            79999999999999983    35689999996543

>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]

Probab=84.15  E-value=1.3  Score=38.57  Aligned_cols=30  Identities=27%  Similarity=0.499  Sum_probs=20.4

Q ss_pred             HHHHHHHhh-hhhhhccccccccEEEEEcCC
Q 031038          111 YKDIQKATQ-NFTNILGQGAFGPVYKATMPS  140 (167)
Q Consensus       111 ~~~l~~~~~-~f~~~lg~g~~g~vy~g~l~~  140 (167)
                      .+|.+.... -..+.+|+|+||+||.|.-++
T Consensus       987 ~deWe~~r~it~~relg~gsfg~Vy~g~~nn 1017 (1025)
T KOG4258|consen  987 PDEWEVSREITLGRELGQGSFGMVYEGNANN 1017 (1025)
T ss_pred             hhHHHHHHHHhhhhhhccCccceEEEecCCc
Confidence            344444432 112689999999999998754

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=84.12  E-value=0.85  Score=36.80  Aligned_cols=43  Identities=33%  Similarity=0.513  Sum_probs=31.5

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHH---HHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKE---FQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~---F~~e~~  165 (167)
                      ..||+|.||.|-++.= ..|..||||.++...-.+..+   ..+||+
T Consensus        59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIe  105 (668)
T KOG0611|consen   59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIE  105 (668)
T ss_pred             HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHH
Confidence            4899999999998876 578999999996654443333   344554

>PF03597 CcoS: Cytochrome oxidase maturation protein cbb3-type; InterPro: IPR004714 Cytochrome cbb3 oxidases are found almost exclusively in Proteobacteria, and represent a distinctive class of proton-pumping respiratory haem-copper oxidases (HCO) that lack many of the key structural features that contribute to the reaction cycle of the intensely studied mitochondrial cytochrome c oxidase (CcO)

Probab=83.57  E-value=2.3  Score=22.99  Aligned_cols=25  Identities=16%  Similarity=0.065  Sum_probs=16.3

Q ss_pred             ehhhHHHHHHHHHHHHHHHhhhhee
Q 031038           10 IGICVGLALGILIATLVFFGLRWYK   34 (167)
Q Consensus        10 i~ii~g~~~~v~~i~~~~~~~~~~r   34 (167)
                      +.+.+++.+++.++++.+|+|.-|+
T Consensus         3 l~~lip~sl~l~~~~l~~f~Wavk~   27 (45)
T PF03597_consen    3 LYILIPVSLILGLIALAAFLWAVKS   27 (45)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcc
Confidence            4556666666666677777776544

Expression of cytochrome cbb3 oxidase allows human pathogens to colonise anoxic tissues and agronomically important diazotrophs to sustain nitrogen fixation []. Genes encoding a cytochrome cbb3 oxidase were initially designated fixNOQP (ccoNOQP), the ccoNOQP operon is always found close to a second gene cluster, known as fixGHIS (ccoGHIS) whose expression is necessary for the assembly of a functional cbb3 oxidase. On the basis of their derived amino acid sequences each of the four proteins encoded by the ccoGHIS operon are thought to be membrane-bound. It has been suggested that they may function in concert as a multi-subunit complex, possibly playing a role in the uptake and metabolism of copper required for the assembly of the binuclear centre of cytochrome cbb3 oxidase.

>PF02038 ATP1G1_PLM_MAT8: ATP1G1/PLM/MAT8 family; InterPro: IPR000272 The FXYD protein family contains at least seven members in mammals []

Probab=83.21  E-value=0.93  Score=24.96  Aligned_cols=8  Identities=25%  Similarity=0.360  Sum_probs=3.2

Q ss_pred             hhhHHHHH
Q 031038           11 GICVGLAL   18 (167)
Q Consensus        11 ~ii~g~~~   18 (167)
                      |+++++++
T Consensus        18 GLi~A~vl   25 (50)
T PF02038_consen   18 GLIFAGVL   25 (50)
T ss_dssp             HHHHHHHH
T ss_pred             chHHHHHH
Confidence            34444333

Two other family members that are not obvious orthologs of any identified mammalian FXYD protein exist in zebrafish. All these proteins share a signature sequence of six conserved amino acids comprising the FXYD motif in the NH2-terminus, and two glycines and one serine residue in the transmembrane domain. FXYD proteins are widely distributed in mammalian tissues with prominent expression in tissues that perform fluid and solute transport or that are electrically excitable. Initial functional characterisation suggested that FXYD proteins act as channels or as modulators of ion channels however studies have revealed that most FXYD proteins have another specific function and act as tissue-specific regulatory subunits of the Na,K-ATPase. Each of these auxiliary subunits produces a distinct functional effect on the transport characteristics of the Na,K-ATPase that is adjusted to the specific functional demands of the tissue in which the FXYD protein is expressed. FXYD proteins appear to preferentially associate with Na,K-ATPase alpha1-beta isozymes, and affect their function in a way that render them operationally complementary or supplementary to coexisting isozymes.; GO: 0005216 ion channel activity, 0006811 ion transport, 0016020 membrane; PDB: 2JO1_A 2JP3_A 2ZXE_G 3A3Y_G 3N23_E 3B8E_H 3KDP_G 3N2F_E.

>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain

Probab=82.61  E-value=1.6  Score=27.78  Aligned_cols=31  Identities=23%  Similarity=0.367  Sum_probs=17.3

Q ss_pred             eeehhhHHHHHHHHHHHHHHHhhhheecccC
Q 031038            8 VIIGICVGLALGILIATLVFFGLRWYKKHDH   38 (167)
Q Consensus         8 ~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~~   38 (167)
                      .++|++++++++-++|++++=|-.||+-...
T Consensus        19 ~LVGVv~~al~~SlLIalaaKC~~~~k~~~S   49 (102)
T PF15176_consen   19 FLVGVVVTALVTSLLIALAAKCPVWYKYLAS   49 (102)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence            3566666666655666655555555554433

>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT

Probab=82.55  E-value=1.6  Score=28.29  Aligned_cols=17  Identities=6%  Similarity=0.145  Sum_probs=7.0

Q ss_pred             HHHHHHHhhhheecccC
Q 031038           22 IATLVFFGLRWYKKHDH   38 (167)
Q Consensus        22 ~i~~~~~~~~~~r~~~~   38 (167)
                      ++++-++.|+..+++++
T Consensus        14 ~l~asl~~wr~~~rq~k   30 (107)
T PF15330_consen   14 SLAASLLAWRMKQRQKK   30 (107)
T ss_pred             HHHHHHHHHHHHhhhcc
Confidence            33444444444443333

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=81.97  E-value=2.1  Score=33.07  Aligned_cols=29  Identities=31%  Similarity=0.418  Sum_probs=22.5

Q ss_pred             hhccccccccEEEEEcCCC--cEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSG--GVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g--~~vavk~l~~  151 (167)
                      ..||+|+||.||.+.-.+.  ..+|+|....
T Consensus        24 ~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~   54 (322)
T KOG1164|consen   24 KKIGEGGFGAVYLVSDKSEKNKEYAKKLEKK   54 (322)
T ss_pred             eeccccCCceEEEEEecCCCCeeEEEEEEEe
Confidence            4899999999999986443  3678877644

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=81.65  E-value=0.68  Score=35.40  Aligned_cols=43  Identities=30%  Similarity=0.409  Sum_probs=30.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC--CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD--SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~--~~~~~~~F~~e~~  165 (167)
                      +-||-|.||.||..+- ++|..||.|++.+-  +....+.|.+|++
T Consensus        59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~k  104 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIK  104 (449)
T ss_pred             CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHH
Confidence            4899999999998877 47899999998542  1222355655554

>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type

Probab=81.39  E-value=2.5  Score=23.46  Aligned_cols=26  Identities=23%  Similarity=0.133  Sum_probs=16.7

Q ss_pred             eehhhHHHHHHHHHHHHHHHhhhhee
Q 031038            9 IIGICVGLALGILIATLVFFGLRWYK   34 (167)
Q Consensus         9 ii~ii~g~~~~v~~i~~~~~~~~~~r   34 (167)
                      ++.+.+++.+++.++++++|+|.-|+
T Consensus         3 il~~LIpiSl~l~~~~l~~f~Wavk~   28 (51)
T TIGR00847         3 ILTILIPISLLLGGVGLVAFLWSLKS   28 (51)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            34556666666667777777776544

CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=81.31  E-value=0.55  Score=32.28  Aligned_cols=31  Identities=23%  Similarity=0.248  Sum_probs=19.6

Q ss_pred             cceeehhhHHHHHHHHHHHHHHHhhhheeccc
Q 031038            6 DLVIIGICVGLALGILIATLVFFGLRWYKKHD   37 (167)
Q Consensus         6 ~~~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~   37 (167)
                      .+.++||.+++++ ++++++.+||++++|..=
T Consensus        52 IGvVVGVGg~ill-~il~lvf~~c~r~kktdf   82 (154)
T PF04478_consen   52 IGVVVGVGGPILL-GILALVFIFCIRRKKTDF   82 (154)
T ss_pred             EEEEecccHHHHH-HHHHhheeEEEecccCcc
Confidence            4567776665554 555566777777776533

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=81.09  E-value=0.76  Score=38.09  Aligned_cols=30  Identities=40%  Similarity=0.553  Sum_probs=25.4

Q ss_pred             hhhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          122 TNILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..+||+|.|.+||+++= ..+...|||.|+.
T Consensus        78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K  108 (604)
T KOG0592|consen   78 GKILGEGSYSTVVLAREKATGKEYAIKVLDK  108 (604)
T ss_pred             hheeccccceeEEEeeecCCCceeeHhhhhH
Confidence            47999999999999976 4678899999843

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=80.94  E-value=0.79  Score=37.07  Aligned_cols=33  Identities=42%  Similarity=0.644  Sum_probs=25.1

Q ss_pred             hhhhhccccccccEEEEEcCCC-cEEEEEEeccC
Q 031038          120 NFTNILGQGAFGPVYKATMPSG-GVAAIKVLASD  152 (167)
Q Consensus       120 ~f~~~lg~g~~g~vy~g~l~~g-~~vavk~l~~~  152 (167)
                      +|.-+||+|+||.|..+.-... ...|||.|+..
T Consensus       352 nFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKD  385 (683)
T KOG0696|consen  352 NFLMVLGKGSFGKVLLAERKGTDELYAIKILKKD  385 (683)
T ss_pred             ceEEEeccCccceeeeecccCcchhhhhhhhccc
Confidence            4457999999999999887432 35799988543

>PHA03210 serine/threonine kinase US3; Provisional

Probab=80.84  E-value=2  Score=35.42  Aligned_cols=16  Identities=31%  Similarity=0.679  Sum_probs=14.6

Q ss_pred             hhccccccccEEEEEc
Q 031038          123 NILGQGAFGPVYKATM  138 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l  138 (167)
                      ..||+|+||.||++.+
T Consensus       154 ~~LG~G~fG~Vyl~~~  169 (501)
T PHA03210        154 DDLPAGAFGKIFICAL  169 (501)
T ss_pred             eEecCCCCcceEEEEE
Confidence            7899999999999876

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=80.54  E-value=5  Score=30.86  Aligned_cols=41  Identities=24%  Similarity=0.405  Sum_probs=30.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      ..+|+|.||.+..++- +..+.+++|-+... -....+|.+|.
T Consensus        30 k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEf   71 (378)
T KOG1345|consen   30 KQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREF   71 (378)
T ss_pred             HHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHh
Confidence            5899999999999988 45677888887432 12356777764

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=80.42  E-value=4.1  Score=32.88  Aligned_cols=30  Identities=30%  Similarity=0.520  Sum_probs=25.2

Q ss_pred             hhccccccccEEEEEcCC-CcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMPS-GGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~-g~~vavk~l~~~  152 (167)
                      ..||.|..|.||.+.+.+ +...|+|.++..
T Consensus        83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~  113 (459)
T KOG0610|consen   83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKE  113 (459)
T ss_pred             HHcCCCCceeEEEEEecCCCceEEEEEecHH
Confidence            389999999999999954 367899999653

>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5

Probab=80.03  E-value=0.55  Score=35.90  Aligned_cols=31  Identities=16%  Similarity=-0.052  Sum_probs=0.0

Q ss_pred             eeehhhHHHHHHHHHHHHHHHhhhheecccC
Q 031038            8 VIIGICVGLALGILIATLVFFGLRWYKKHDH   38 (167)
Q Consensus         8 ~ii~ii~g~~~~v~~i~~~~~~~~~~r~~~~   38 (167)
                      .|.++++.++++++.+++++++.++|+.+..
T Consensus       149 ~IpaVVI~~iLLIA~iIa~icyrrkR~GK~~  179 (290)
T PF05454_consen  149 FIPAVVIAAILLIAGIIACICYRRKRKGKMS  179 (290)
T ss_dssp             -------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhccccc
Confidence            3466777777778888888888888886655

5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	167
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-08
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		4e-08

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Query: 94  KDRFTSAPSASG-------IPRYAYKDIQKATQNFTN--ILGQGAFGPVYKATMPSGGVA 144
           +D F   P+          + R++ +++Q A+ NF+N  ILG+G FG VYK  +  G + 
Sbjct: 6   QDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLV 65
Query: 145 AIKVLASDSHQ-GEKEFQTEV 164
           A+K L  +  Q GE +FQTEV
Sbjct: 66  AVKRLKEERXQGGELQFQTEV 86

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 106 IPRYAYKDIQKATQNFTN--ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQ-GEKEFQT 162
           + R++ +++Q A+ NF N  ILG+G FG VYK  +  G + A+K L  +  Q GE +FQT
Sbjct: 17  LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 163 EV 164
           EV
Sbjct: 77  EV 78

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	167
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-21
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-21
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	9e-16
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-06
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-05
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-05
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-05
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-05
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	5e-05
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	5e-05
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	6e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	7e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	8e-05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	9e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-04
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-04
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-04
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-04
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-04
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-04
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-04
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	5e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	6e-04
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	6e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	6e-04
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-04
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	7e-04
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	8e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	9e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 88.0 bits (219), Expect = 1e-21
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 84  SQVSWWSNHSKDRFTSAPSASGIPR-YAYKDIQKATQNF--TNILGQGAFGPVYKATMPS 140
           S+ S  +N   D  +S+             D+++AT NF    ++G G FG VYK  +  
Sbjct: 3   SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62

Query: 141 GGVAAIKVLASDSHQGEKEFQTEV 164
           G   A+K    +S QG +EF+TE+
Sbjct: 63  GAKVALKRRTPESSQGIEEFETEI 86

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 86.9 bits (216), Expect = 3e-21
 Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 3/60 (5%)

Query: 108 RYAYKDIQKATQNF--TNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQG-EKEFQTEV 164
           R++ +++Q A+ NF   NILG+G FG VYK  +  G + A+K L  +  QG E +FQTEV
Sbjct: 19  RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEV 78

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 71.8 bits (177), Expect = 9e-16
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 13/75 (17%)

Query: 102 SASGIPRYAYKDIQKATQNF--------TNILGQGAFGPVYKATMPSGGVAAIKVLAS-- 151
           S +    +++ +++  T NF         N +G+G FG VYK  +      A+K LA+  
Sbjct: 8   SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMV 66

Query: 152 --DSHQGEKEFQTEV 164
              + + +++F  E+
Sbjct: 67  DITTEELKQQFDQEI 81

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 91  NHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVL 149
           +  K R          P   ++ + +        LG GAFG VYKA    +G +AA KV+
Sbjct: 1   SMRKSREYEHVRRDLDPNEVWEIVGE--------LGDGAFGKVYKAKNKETGALAAAKVI 52

Query: 150 ASDSHQGEKEFQTEV 164
            + S +  +++  E+
Sbjct: 53  ETKSEEELEDYIVEI 67

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 111 YKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
            +++   +       +  +G FG V+KA + +  V A+K+      Q   + + EV
Sbjct: 16  TENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYV-AVKIFPIQDKQSW-QNEYEV 69

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 43.9 bits (104), Expect = 6e-06
 Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 12/97 (12%)

Query: 69  ANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQG 128
           ++ V +       +   V+      K          G PR       K        +G+G
Sbjct: 8   SSGVDLGTENLYFQSGVVT--HEQFKAALRMVVD-QGDPRLLLDSYVK--------IGEG 56

Query: 129 AFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEV 164
           + G V  A    SG   A+K++     Q  +    EV
Sbjct: 57  STGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEV 93

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%)

Query: 100 APSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGE- 157
           A   S  P+     +      +   +G+G FG V+K  +       AIK L     +GE 
Sbjct: 2   AMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGET 61

Query: 158 ------KEFQTEVR 165
                 +EFQ EV 
Sbjct: 62  EMIEKFQEFQREVF 75

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 10/77 (12%)

Query: 90  SNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKV 148
            +  +       +    P   +  ++K        +G+G+FG V+K     +  V AIK+
Sbjct: 3   HSPVQSGLPGMQNLKADPEELFTKLEK--------IGKGSFGEVFKGIDNRTQKVVAIKI 54

Query: 149 LASDSHQGEKE-FQTEV 164
           +  +  + E E  Q E+
Sbjct: 55  IDLEEAEDEIEDIQQEI 71

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 9/55 (16%)

Query: 110 AYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
              +++        ++G+G +G VYK ++      A+KV    S    + F  E 
Sbjct: 11  DLDNLK-----LLELIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEK 56

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 12/100 (12%)

Query: 63  DFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFT 122
           D+  P   ++  + +  P      +      KD   +       P   + D+++      
Sbjct: 11  DYDIPTTENLYFQGAMDPMPAGGRA---GSLKDPDVAELFFKDDPEKLFSDLRE------ 61

Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ 161
             +G G+FG VY A  + +  V AIK ++    Q  +++Q
Sbjct: 62  --IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ 99

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 9/60 (15%)

Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVR 165
           P+  Y   +K        +GQGA G VY A  + +G   AI+ +       ++    E+ 
Sbjct: 18  PKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 69

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 8/55 (14%)

Query: 111 YKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR 165
           YK+I+        ++G+GAFG V KA        AIK + S+S    K F  E+R
Sbjct: 7   YKEIE-----VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESE--RKAFIVELR 53

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVR 165
            +LG+G FG   K T   +G V  +K L     + ++ F  EV+
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVK 59

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 2/77 (2%)

Query: 91  NHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKV-- 148
           +H     +     +    +    ++    +    +G G    V++       + AIK   
Sbjct: 2   HHHHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN 61

Query: 149 LASDSHQGEKEFQTEVR 165
           L    +Q    ++ E+ 
Sbjct: 62  LEEADNQTLDSYRNEIA 78

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVR 165
           +G G +G VYK   + +G +AAIKV+       E+E + E+ 
Sbjct: 32  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEIN 72

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 12/78 (15%)

Query: 98  TSAPSASGIPRYAYK--------DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVL 149
            S  SA   PR A +        DI         ++G+G FG VY      G V AI+++
Sbjct: 6   LSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRW-HGEV-AIRLI 63

Query: 150 --ASDSHQGEKEFQTEVR 165
               D+    K F+ EV 
Sbjct: 64  DIERDNEDQLKAFKREVM 81

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 17/91 (18%)

Query: 78  GFPQKKSQVSWWSNHSKDRFTSAPSASGIP----RYAYKDIQKATQNFTNILGQGAFGPV 133
            +      +      S     S+ S SG+P    R   K IQ         +G+G +G V
Sbjct: 3   TYIPPGESLRDLIEQS----QSSGSGSGLPLLVQRTIAKQIQ-----MVKQIGKGRYGEV 53

Query: 134 YKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           +        V A+KV  +     E  +  E 
Sbjct: 54  WMGKWRGEKV-AVKVFFT---TEEASWFRET 80

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 10/69 (14%)

Query: 98  TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG 156
            S+     I R  Y+  +         +G GA   V  A   P     AIK +  +  Q 
Sbjct: 4   DSSALPWSINRDDYELQEV--------IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT 55

Query: 157 EKE-FQTEV 164
             +    E+
Sbjct: 56  SMDELLKEI 64

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 109 YAYKD---IQKATQNFTNILGQGAFGPVYKATMPSGGVA-----AIKVLASDSHQGEKEF 160
           YA +D    ++    + + LG+G FG V        G       A+K L       +++F
Sbjct: 12  YACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 71

Query: 161 QTEVR 165
           Q E++
Sbjct: 72  QREIQ 76

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 41.0 bits (96), Expect = 7e-05
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 10/105 (9%)

Query: 65  SAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFT-- 122
           S  V     +K +   + + Q     +   D    A S++       + I    + ++  
Sbjct: 8   SGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSAN------ECISVKGRIYSIL 61

Query: 123 NILGQGAFGPVYKATMPSGGVAAIKV--LASDSHQGEKEFQTEVR 165
             +G G    V++       + AIK   L    +Q    ++ E+ 
Sbjct: 62  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 106

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 40.5 bits (95), Expect = 8e-05
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 98  TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE 157
           T++ S SG+P    + I +        +G+G FG V++     G   A+K+ +S   + E
Sbjct: 24  TTSGSGSGLPLLVQRTIARTIV-LQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REE 78

Query: 158 KEFQTEV 164
           + +  E 
Sbjct: 79  RSWFREA 85

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 40.3 bits (95), Expect = 9e-05
 Identities = 14/66 (21%), Positives = 20/66 (30%), Gaps = 16/66 (24%)

Query: 106 IPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA--------AIKVLASDSHQGE 157
           I     +D+      F   LGQG F  ++K      G           +KVL        
Sbjct: 5   IRN---EDLI-----FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS 56

Query: 158 KEFQTE 163
           + F   
Sbjct: 57  ESFFEA 62

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 25/136 (18%), Positives = 42/136 (30%), Gaps = 9/136 (6%)

Query: 33  YKKHDHFRRCSNERSVATHPIRINGLGTSIDFSAPVANSVAVKASGFPQKKSQVSWWSNH 92
           +  H H RR    R+     I +      +D    +             +       +  
Sbjct: 9   HHHHHHGRR----RASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTV 64

Query: 93  SKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKV 148
             D     P      ++          +F  ++G+G FG VY  T+          A+K 
Sbjct: 65  HIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS 124

Query: 149 LASDSHQGEK-EFQTE 163
           L   +  GE  +F TE
Sbjct: 125 LNRITDIGEVSQFLTE 140

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 8/80 (10%)

Query: 92  HSKDRFTSAPSASGIPRYAYKD--IQKATQNFTNILGQGAFGPVYKATMPSGGVA----A 145
           H        P  S   +   +D  I +       ILG+G FG V +  +          A
Sbjct: 7   HHHHSSGLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVA 66

Query: 146 IKVLASD--SHQGEKEFQTE 163
           +K +  D  S +  +EF +E
Sbjct: 67  VKTMKLDNSSQREIEEFLSE 86

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 121 FTNILGQGAFGPVYKATMPSGGV---AAIKVLASDSHQGEK-EFQTE 163
           F +++G+G FG V KA +   G+   AAIK +   + + +  +F  E
Sbjct: 29  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGE 75

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 11/136 (8%)

Query: 38  HFRRCSNERSVATHPIRINGLGTSIDFSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRF 97
           H    S+   + T  +    +  S D  +   ++ A +         ++   S  +    
Sbjct: 4   HHHHHSSGVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALA 63

Query: 98  TSAPSASGIPRYAYKDIQKATQNFTN--------ILGQGAFGPVYKATMPSGGVA-AIKV 148
              P+      + ++ +        +        ILG G FG V+K    + G+  A K+
Sbjct: 64  VDIPAPPAP--FDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKI 121

Query: 149 LASDSHQGEKEFQTEV 164
           + +   + ++E + E+
Sbjct: 122 IKTRGMKDKEEVKNEI 137

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 121 FTNILGQGAFGPVYKAT---MPSGGVA---AIKVLASDSHQGEKEFQTEVR 165
               LG+GAFG V+ A    +         A+K L   +    K+FQ E  
Sbjct: 19  LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAE 69

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 2/45 (4%)

Query: 123 NILGQGAFGPVYKATMPSGGVAAIKV--LASDSHQGEKEFQTEVR 165
             +G G    V++       + AIK   L    +Q    ++ E+ 
Sbjct: 15  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 59

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 121 FTNILGQGAFGPVYKAT----MPSGGVA--AIKVLASDSHQGEKEFQTEVR 165
               LG+GAFG V+ A     +P       A+K L   S    ++FQ E  
Sbjct: 45  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAE 95

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 6/81 (7%)

Query: 90  SNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNI--LGQGAFGPVYKAT-MPSGGVAAI 146
           S+H     +S              +    +++  I  LG+G F  V     +  G   A+
Sbjct: 3   SSHHHHHHSSGRENLYFQG---HMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYAL 59

Query: 147 KVLASDSHQGEKEFQTEVRAH 167
           K +     Q  +E Q E   H
Sbjct: 60  KRILCHEQQDREEAQREADMH 80

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 112 KDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVLASDSHQGEK-EFQTE 163
                   +F  ++G+G FG VY  T+          A+K L   +  GE  +F TE
Sbjct: 20  IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE 76

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 9/57 (15%)

Query: 108 RYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV 164
           R   +DI          +G+G +G V++ +     V A+K+ +S   + EK +  E 
Sbjct: 4   RTVARDIT-----LLECVGKGRYGEVWRGSWQGENV-AVKIFSS---RDEKSWFRET 51

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 121 FTNILGQGAFGPVYKATMPSGGVA-AIKVLASD-SHQGEKEFQTEVR 165
               +G+G FG V+   + +     A+K          + +F  E R
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR 164

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 11/59 (18%)

Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEV 164
           P   +  ++K        LG+G++G VYKA    +G + AIK +        +E   E+
Sbjct: 27  PEEVFDVLEK--------LGEGSYGSVYKAIHKETGQIVAIKQV--PVESDLQEIIKEI 75

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 15/65 (23%)

Query: 106 IPRYAYKDIQKATQNFTNILGQGAFGPVYKAT----MPSGGVA--AIKVLASDSHQGEK- 158
            PR    ++Q     F   LG GAFG V +AT         V   A+K+L S +H  EK 
Sbjct: 43  FPR---NNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94

Query: 159 EFQTE 163
              +E
Sbjct: 95  ALMSE 99

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 38.3 bits (88), Expect = 5e-04
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 17/68 (25%)

Query: 106 IPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLA--------SDSHQGE 157
           +P    +  +K        +G+G FG V++       V AIK++A            +  
Sbjct: 17  LPTEKLQRCEK--------IGEGVFGEVFQTIADHTPV-AIKIIAIEGPDLVNGSHQKTF 67

Query: 158 KEFQTEVR 165
           +E   E+ 
Sbjct: 68  EEILPEII 75

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 8/73 (10%)

Query: 101 PSASGIPRYAYKD---IQKATQNFTNILGQGAFGPVYKATMPSGG-----VAAIKVLASD 152
              +    +  +D    ++    F   LG+G FG V              V A+K L   
Sbjct: 22  FQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS 81

Query: 153 SHQGEKEFQTEVR 165
           + +  ++F+ E+ 
Sbjct: 82  TEEHLRDFEREIE 94

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 121 FTNILGQGAFGPVYKATMPSGGVA----AIKVLASD--SHQGEKEFQTE 163
              +LG+G FG V +A +     +    A+K+L +D  +    +EF  E
Sbjct: 27  LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 6/75 (8%)

Query: 98  TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLA----SD 152
            +AP A  IP        +        LG+G F   ++ +   +  V A K++       
Sbjct: 22  AAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK 81

Query: 153 SHQGEKEFQTEVRAH 167
            HQ EK    E+  H
Sbjct: 82  PHQREK-MSMEISIH 95

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 38.1 bits (89), Expect = 7e-04
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)

Query: 121 FTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE--KEFQTEVR 165
               +G G+FG V++A    G   A+K+L       E   EF  EV 
Sbjct: 41  IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVA 86

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 120 NFTNILGQGAFGPVYKATMPSGGVAAIKVLASD--SHQGEKEFQTEVR 165
           NF   L +   G ++K     G    +KVL     S +  ++F  E  
Sbjct: 13  NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECP 59

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 37.7 bits (88), Expect = 7e-04
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVR 165
           +G G+FG VYK     G V A+K+L   + + Q  + F+ EV 
Sbjct: 32  IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVG 72

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 38.0 bits (88), Expect = 7e-04
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 11/64 (17%)

Query: 112 KDIQKATQNFT--NILGQGAFGPVYKAT------MPSGGVAAIKVLASDSHQGEKEFQTE 163
            + Q  ++     ++LG+GAF  VY+AT        +     +KV    +     EF   
Sbjct: 58  TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIG 114

Query: 164 VRAH 167
            +  
Sbjct: 115 TQLM 118

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 37.9 bits (88), Expect = 8e-04
 Identities = 25/165 (15%), Positives = 44/165 (26%), Gaps = 21/165 (12%)

Query: 4   KSDLVIIGICVGLALGILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRINGLGTSID 63
             + + +     L +   +A L+    R                     IR    G    
Sbjct: 293 APEPLTV-TAPSLTIAENMADLIDGYCRLVNGATQSF-----------IIRPQKEGERAL 340

Query: 64  FSAPVANSVAVKASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTN 123
            S P   +   +           +       D          +P     +IQ+       
Sbjct: 341 PSIPKLANNEKQGVRSHTVSVSETDDYAEIID----EEDTYTMPSTRDYEIQRERIELGR 396

Query: 124 ILGQGAFGPVYKAT--MPSGGVA--AIKVLASD-SHQGEKEFQTE 163
            +G+G FG V++     P       AIK   +  S    ++F  E
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 441

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 37.7 bits (88), Expect = 9e-04
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 5/50 (10%)

Query: 121 FTNILGQGAFGPVYKATMPSGG-----VAAIKVLASDSHQGEKEFQTEVR 165
           F   LG+G FG V              V A+K L   + +  ++F+ E+ 
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	167
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	98.35
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.18
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.16
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	97.89
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	97.79
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	97.76
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	97.74
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	97.71
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	97.65
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.63
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	97.61
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	97.6
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.58
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	97.53
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	97.44
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	97.41
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	97.4
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	97.18
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	97.16
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	97.14
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	97.08
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	97.04
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	97.04
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	97.02
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.01
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	96.99
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	96.99
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	96.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	96.97
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	96.96
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	96.94
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	96.92
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	96.91
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	96.9
2l34_A	33	TYRO protein tyrosine kinase-binding protein; immu	96.89
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	96.86
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	96.86
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	96.79
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	96.79
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	96.75
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	96.75
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	96.75
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	96.74
3niz_A	311	Rhodanese family protein; structural genomics, str	96.74
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	96.74
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	96.71
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	96.71
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	96.7
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	96.69
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	96.69
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	96.67
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	96.67
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	96.64
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	96.63
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	96.62
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	96.62
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	96.61
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	96.6
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	96.6
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	96.6
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	96.59
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	96.59
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	96.57
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	96.56
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	96.55
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	96.54
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	96.53
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	96.49
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	96.46
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	96.46
3soc_A	322	Activin receptor type-2A; structural genomics cons	96.45
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	96.42
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	96.4
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	96.38
3uqc_A	286	Probable conserved transmembrane protein; structur	96.36
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	96.35
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	96.33
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	96.29
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	96.28
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	96.26
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	96.24
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	96.22
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	96.21
3rp9_A	458	Mitogen-activated protein kinase; structural genom	96.21
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	96.2
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	96.2
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	96.19
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	96.18
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	96.18
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	96.17
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	96.17
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	96.17
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	96.16
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	96.14
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	96.14
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	96.13
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	96.12
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	96.12
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	96.11
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	96.11
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	96.11
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	96.09
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	96.09
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	96.09
3an0_A	340	Dual specificity mitogen-activated protein kinase;	96.08
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	96.08
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	96.08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	96.07
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	96.07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	96.06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	96.05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	96.03
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	96.01
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	96.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	96.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	95.99
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	95.99
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	95.98
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	95.98
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	95.98
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	95.97
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	95.96
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	95.96
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	95.95
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	95.93
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	95.92
3ork_A	311	Serine/threonine protein kinase; structural genomi	95.92
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	95.88
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	95.88
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	95.88
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	95.87
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	95.87
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	95.86
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	95.86
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	95.86
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	95.85
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	95.85
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	95.85
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	95.84
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	95.84
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	95.83
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	95.83
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	95.83
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	95.82
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	95.82
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	95.82
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	95.8
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	95.8
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	95.8
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	95.79
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	95.79
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	95.77
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	95.76
3aln_A	327	Dual specificity mitogen-activated protein kinase;	95.76
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	95.75
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	95.72
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	95.72
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	95.72
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	95.68
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	95.67
2a19_B	284	Interferon-induced, double-stranded RNA-activated	95.67
2k9y_A	41	Ephrin type-A receptor 2; receptor tyrosine kinase	95.65
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	95.65
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	95.64
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	95.63
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	95.63
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	95.63
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	95.61
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	95.6
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	95.6
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	95.57
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	95.57
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	95.51
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	95.48
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	95.46
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	95.45
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	95.45
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	95.44
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	95.44
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	95.44
3q4u_A	301	Activin receptor type-1; structural genomics conso	95.43
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	95.43
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	95.43
3fme_A	290	Dual specificity mitogen-activated protein kinase;	95.43
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	95.42
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	95.41
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	95.39
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	95.39
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	95.38
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	95.37
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	95.35
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	95.32
2k9y_A	41	Ephrin type-A receptor 2; receptor tyrosine kinase	95.29
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	95.28
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	95.27
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	95.27
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	95.25
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	95.25
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	95.25
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	95.25
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	95.24
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	95.22
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	95.22
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	95.2
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	95.19
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	95.18
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	95.18
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	95.18
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	95.15
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	95.13
2dyl_A	318	Dual specificity mitogen-activated protein kinase	95.12
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	95.11
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	95.11
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	95.11
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	95.08
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	95.03
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	95.01
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	94.99
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	94.99
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	94.98
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	94.97
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	94.96
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	94.93
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	94.93
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	94.92
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	94.91
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	94.88
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	94.86
1iij_A	35	ERBB-2 receptor protein-tyrosine kinase; alpha-hel	94.86
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	94.84
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	94.82
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	94.76
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	94.73
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	94.69
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	94.65
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	94.63
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	94.61
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	94.6
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	94.58
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	94.54
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	94.51
2klu_A	70	T-cell surface glycoprotein CD4; cell membrane, di	94.48
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	94.43
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	94.37
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	94.35
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	94.33
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	94.27
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	93.57
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	93.52
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	93.44
1q55_A	880	EP-cadherin, C-cadherin; trans interaction, desmos	93.01
2knc_B	79	Integrin beta-3; transmembrane signaling, protein	93.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	92.81
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	92.73
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	92.3
2l9u_A	40	Receptor tyrosine-protein kinase ERBB-3; transmenb	91.12
1afo_A	40	Glycophorin A; integral membrane protein, transmem	90.61
2zxe_G	74	FXYD10, phospholemman-like protein; membrane prote	89.97
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	89.87
2k9j_B	43	Integrin beta-3; transmembrane complex, cell adhes	88.5
2llm_A	43	Amyloid beta A4 protein; alzheimer'S disease, prot	87.45
2jp3_A	67	FXYD domain-containing ION transport regulator 4;	87.11
2knc_A	54	Integrin alpha-IIB; transmembrane signaling, prote	87.1
2jp3_A	67	FXYD domain-containing ION transport regulator 4;	86.47
2lx0_A	32	Membrane fusion protein P14; membrane fusion prote	85.94
1zza_A	90	Stannin, AG8_1; helix, membrane protein; NMR {Homo	85.29
2jo1_A	72	Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrol	83.96
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	83.38
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	82.67
2l35_A	63	DAP12-NKG2C_TM; immunoreceptor, transmembrane asse	82.54
2knc_B	79	Integrin beta-3; transmembrane signaling, protein	82.23
2l8s_A	54	Integrin alpha-1; transmembrane region, detergent	81.35

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=98.35  E-value=9.2e-08  Score=72.41  Aligned_cols=48  Identities=31%  Similarity=0.443  Sum_probs=36.1

Q ss_pred             hhhhhhccccccccEEEEEcC------CCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          119 QNFTNILGQGAFGPVYKATMP------SGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       119 ~~f~~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      ..|.+.||+|+||.||+|.+.      ++..||||+++... ....++|.+|+.+
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~i   82 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML   82 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHH
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHH
Confidence            356678999999999999983      45789999996543 3345789999864

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.18  E-value=1.3e-06  Score=66.71  Aligned_cols=45  Identities=33%  Similarity=0.484  Sum_probs=36.8

Q ss_pred             hhhccccccccEEEEEcC------CCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          122 TNILGQGAFGPVYKATMP------SGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      .+.||+|+||.||+|.+.      ++..||||.++.......++|.+|+++
T Consensus        46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~i   96 (329)
T 4aoj_A           46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL   96 (329)
T ss_dssp             EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHH
Confidence            368999999999999974      467899999987655566889999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.16  E-value=1.4e-06  Score=65.55  Aligned_cols=45  Identities=33%  Similarity=0.497  Sum_probs=34.8

Q ss_pred             hhhccccccccEEEEEcC------CCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          122 TNILGQGAFGPVYKATMP------SGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      .+.||+|+||.||+|.+.      ++..||||+++.......++|.+|+++
T Consensus        18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~i   68 (299)
T 4asz_A           18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL   68 (299)
T ss_dssp             EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHH
T ss_pred             eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHH
Confidence            368999999999999974      367899999987666667889999864

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=97.89  E-value=7.4e-06  Score=42.02  Aligned_cols=31  Identities=16%  Similarity=0.105  Sum_probs=23.2

Q ss_pred             cCCcceeehhhHHHHHHHHHHHHHHHhhhhe
Q 031038            3 HKSDLVIIGICVGLALGILIATLVFFGLRWY   33 (167)
Q Consensus         3 ~~s~~~ii~ii~g~~~~v~~i~~~~~~~~~~   33 (167)
                      ++|.+.|++|++|+++++++++.+.++++||
T Consensus         7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr   37 (38)
T 2k1k_A            7 GLTGGEIVAVIFGLLLGAALLLGILVFRSRR   37 (38)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence            4677889999999998877776666555544

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=97.79  E-value=6.4e-06  Score=61.93  Aligned_cols=57  Identities=39%  Similarity=0.693  Sum_probs=43.1

Q ss_pred             CHHHHHHHhhhhh--hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          110 AYKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       110 ~~~~l~~~~~~f~--~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ++.++...+.+|.  ..||+|+||.||+|...+|..||||.+........+.|.+|++.
T Consensus        30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~   88 (321)
T 2qkw_B           30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET   88 (321)
T ss_dssp             CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHG
T ss_pred             cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHH
Confidence            3334444445554  68999999999999998899999999976655556788888753

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=97.76  E-value=2.6e-05  Score=41.17  Aligned_cols=28  Identities=18%  Similarity=0.146  Sum_probs=12.2

Q ss_pred             ceeehhhHHHHHHHHHHHHHHHhhhhee
Q 031038            7 LVIIGICVGLALGILIATLVFFGLRWYK   34 (167)
Q Consensus         7 ~~ii~ii~g~~~~v~~i~~~~~~~~~~r   34 (167)
                      .+..+++.|++++++++++.+++++||+
T Consensus        12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~   39 (44)
T 2ks1_B           12 SIATGMVGALLLLLVVALGIGLFMRRRH   39 (44)
T ss_dssp             SSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             eEEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence            3444444444444444444444444433

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=97.74  E-value=1.5e-05  Score=59.83  Aligned_cols=61  Identities=43%  Similarity=0.795  Sum_probs=47.4

Q ss_pred             CCccCHHHHHHHhhhhh--hhccccccccEEEEEcCCCcEEEEEEeccCCc-ccHHHHHHHHhh
Q 031038          106 IPRYAYKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLASDSH-QGEKEFQTEVRA  166 (167)
Q Consensus       106 ~~~~~~~~l~~~~~~f~--~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~-~~~~~F~~e~~~  166 (167)
                      ...+++.++...+.+|.  ..||+|+||.||+|...+|..||||.+..... .....|.+|+++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~   80 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEM   80 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHG
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHH
Confidence            45788899998888886  89999999999999988899999999965432 223467777653

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=97.71  E-value=5.9e-05  Score=56.81  Aligned_cols=59  Identities=22%  Similarity=0.231  Sum_probs=45.7

Q ss_pred             CccCHHHHHHHhhh----------hh--hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          107 PRYAYKDIQKATQN----------FT--NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       107 ~~~~~~~l~~~~~~----------f~--~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..++.+++..++..          |.  ..||+|+||.||+|... +|..||||.++.......+.|.+|+.
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~   94 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVV   94 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHH
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHH
Confidence            45788898888754          22  57999999999999985 78999999997655555677888775

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=97.65  E-value=3.1e-05  Score=40.80  Aligned_cols=28  Identities=14%  Similarity=0.182  Sum_probs=12.1

Q ss_pred             eeehhhHHHHHHHHHHHHHHHhhhheec
Q 031038            8 VIIGICVGLALGILIATLVFFGLRWYKK   35 (167)
Q Consensus         8 ~ii~ii~g~~~~v~~i~~~~~~~~~~r~   35 (167)
                      +..+++.|++++++++++.+++++||++
T Consensus        12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~   39 (44)
T 2l2t_A           12 IAAGVIGGLFILVIVGLTFAVYVRRKSI   39 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence            3344444444444444444444444433

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=97.63  E-value=4.6e-05  Score=57.56  Aligned_cols=44  Identities=30%  Similarity=0.514  Sum_probs=33.9

Q ss_pred             hhhhccccccccEEEEEcCCCcEEEEEEeccCC--cccHHHHHHHHhh
Q 031038          121 FTNILGQGAFGPVYKATMPSGGVAAIKVLASDS--HQGEKEFQTEVRA  166 (167)
Q Consensus       121 f~~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~--~~~~~~F~~e~~~  166 (167)
                      |.+.||+|+||.||+|.+.+  .||||.++...  ....++|.+|+++
T Consensus        40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~i   85 (307)
T 3omv_A           40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAV   85 (307)
T ss_dssp             EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHH
T ss_pred             EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHH
Confidence            34689999999999999854  69999996532  3335789999864

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=97.61  E-value=3.8e-05  Score=58.99  Aligned_cols=44  Identities=30%  Similarity=0.350  Sum_probs=34.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.. .+|..||||.++.......+.|.+|+++
T Consensus        80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~i  124 (346)
T 4fih_A           80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVI  124 (346)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHH
T ss_pred             EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHH
Confidence            5799999999999987 5689999999965444445667788754

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=97.60  E-value=0.00013  Score=54.25  Aligned_cols=59  Identities=29%  Similarity=0.607  Sum_probs=46.4

Q ss_pred             CCccCHHHHHHHhhhhh--------hhccccccccEEEEEcCCCcEEEEEEeccCC----cccHHHHHHHHh
Q 031038          106 IPRYAYKDIQKATQNFT--------NILGQGAFGPVYKATMPSGGVAAIKVLASDS----HQGEKEFQTEVR  165 (167)
Q Consensus       106 ~~~~~~~~l~~~~~~f~--------~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~----~~~~~~F~~e~~  165 (167)
                      ...|++.++..++.+|.        +.||+|+||.||+|.. ++..||||.+....    ....+.|.+|+.
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~   82 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIK   82 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHH
Confidence            46789999999999986        4699999999999998 67899999995432    122456777764

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=97.58  E-value=6e-05  Score=56.46  Aligned_cols=44  Identities=23%  Similarity=0.305  Sum_probs=34.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC--CcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD--SHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~--~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.. ..+..||+|.+...  .....+.|.+|+++
T Consensus        32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~i   78 (290)
T 3fpq_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEM   78 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHH
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHH
Confidence            4799999999999987 46789999999542  23345679888864

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=97.53  E-value=8.2e-05  Score=58.59  Aligned_cols=44  Identities=30%  Similarity=0.350  Sum_probs=35.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.- .+|..||||.++.......+.|.+|+.+
T Consensus       157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~i  201 (423)
T 4fie_A          157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVI  201 (423)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHH
T ss_pred             eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHH
Confidence            6799999999999987 5689999999976544555678888754

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=97.44  E-value=0.00011  Score=56.62  Aligned_cols=44  Identities=27%  Similarity=0.450  Sum_probs=33.7

Q ss_pred             hhccccccccEEEEEcCC------CcEEEEEEeccCCc-ccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPS------GGVAAIKVLASDSH-QGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~------g~~vavk~l~~~~~-~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||+|.+.+      +..||||.++.... ...++|.+|+++
T Consensus        70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~i  120 (353)
T 4ase_A           70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI  120 (353)
T ss_dssp             EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHH
Confidence            689999999999998732      35799999976443 334678888853

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=97.41  E-value=0.00011  Score=38.69  Aligned_cols=28  Identities=25%  Similarity=0.284  Sum_probs=14.6

Q ss_pred             eeehhhHHHHHHHHHHHHHHHhhhheecc
Q 031038            8 VIIGICVGLALGILIATLVFFGLRWYKKH   36 (167)
Q Consensus         8 ~ii~ii~g~~~~v~~i~~~~~~~~~~r~~   36 (167)
                      .++++++|++ +++++++++++|.|||+.
T Consensus        13 ~Ia~~vVGvl-l~vi~~l~~~~~~RRR~~   40 (44)
T 2jwa_A           13 SIISAVVGIL-LVVVLGVVFGILIKRRQQ   40 (44)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHHHHHHHHCS
T ss_pred             chHHHHHHHH-HHHHHHHHHHhheehhhh
Confidence            3677777744 444444444444444433

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=97.40  E-value=0.00015  Score=55.75  Aligned_cols=44  Identities=25%  Similarity=0.364  Sum_probs=28.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC--CcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD--SHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~--~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.- .+|..||||.++..  .....+.|.+|+++
T Consensus        30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~i   76 (350)
T 4b9d_A           30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAV   76 (350)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHH
Confidence            5899999999999986 57899999999543  23334678888764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=97.18  E-value=0.00044  Score=54.60  Aligned_cols=43  Identities=30%  Similarity=0.444  Sum_probs=36.1

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|.||.||+|...++..||||.++... ...++|.+|+.+
T Consensus       194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~  236 (454)
T 1qcf_A          194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANV  236 (454)
T ss_dssp             EEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHH
T ss_pred             EEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHH
Confidence            6899999999999999888899999997643 346788888753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=97.16  E-value=0.00039  Score=54.29  Aligned_cols=44  Identities=27%  Similarity=0.372  Sum_probs=34.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.- .+|..||||.++...  ....+.+.+|+++
T Consensus        60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~i  106 (398)
T 4b99_A           60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI  106 (398)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHH
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHH
Confidence            6899999999999986 578999999996532  2234567788753

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=97.14  E-value=0.0005  Score=51.04  Aligned_cols=44  Identities=25%  Similarity=0.424  Sum_probs=30.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC---cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS---HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~---~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.- .+|+.||+|.++...   ....+.|.+|+++
T Consensus        19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~i   66 (275)
T 3hyh_A           19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY   66 (275)
T ss_dssp             EEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHH
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHH
Confidence            5899999999999986 568999999995432   2234568888754

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=97.08  E-value=0.00052  Score=50.63  Aligned_cols=44  Identities=30%  Similarity=0.540  Sum_probs=35.2

Q ss_pred             hhccccccccEEEEEc-----CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-----~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.+     .++..||||.+........+.|.+|+++
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~   64 (295)
T 3ugc_A           16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI   64 (295)
T ss_dssp             EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred             heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHH
Confidence            5899999999999985     3578999999976655555778888753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=97.04  E-value=0.00054  Score=52.09  Aligned_cols=42  Identities=19%  Similarity=0.347  Sum_probs=34.5

Q ss_pred             CHHHHHHHhhhhh--hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          110 AYKDIQKATQNFT--NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       110 ~~~~l~~~~~~f~--~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      .+.++......|.  ..||+|+||.||++.-.+|..||||++..
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~   56 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFN   56 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECE
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccc
Confidence            3456666666675  89999999999999988899999999954

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.04  E-value=0.00076  Score=49.05  Aligned_cols=42  Identities=26%  Similarity=0.376  Sum_probs=34.5

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...++..||+|.+.... ...++|.+|++
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~   57 (269)
T 4hcu_A           16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAE   57 (269)
T ss_dssp             EEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHH
T ss_pred             heecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHH
Confidence            5899999999999999888899999997542 33567877775

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=97.02  E-value=0.00075  Score=50.18  Aligned_cols=44  Identities=32%  Similarity=0.557  Sum_probs=35.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||++.. .++..||+|.+........+.|.+|+++
T Consensus        16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~   60 (310)
T 3s95_A           16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKV   60 (310)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred             ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHH
Confidence            5899999999999998 4688999999966555556788888753

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.01  E-value=0.00089  Score=49.93  Aligned_cols=44  Identities=27%  Similarity=0.410  Sum_probs=33.6

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||++... +|..||||.++... ....+.|.+|+++
T Consensus        12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   57 (332)
T 3qd2_B           12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKA   57 (332)
T ss_dssp             EEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHH
T ss_pred             eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHH
Confidence            48999999999999985 78899999996433 3345678888753

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=96.99  E-value=0.00071  Score=52.79  Aligned_cols=43  Identities=23%  Similarity=0.193  Sum_probs=32.5

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcc---cHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQ---GEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~---~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|.. .+|..||||.+......   ..+.|.+|+.
T Consensus        84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~  130 (413)
T 3dzo_A           84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVL  130 (413)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHH
T ss_pred             cccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHH
Confidence            5899999999999994 67899999999743222   2456777664

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=96.99  E-value=0.00071  Score=53.40  Aligned_cols=43  Identities=33%  Similarity=0.456  Sum_probs=35.2

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|.||.||+|...++..||||.++... ...++|.+|+++
T Consensus       190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~  232 (452)
T 1fmk_A          190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQV  232 (452)
T ss_dssp             EEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHH
T ss_pred             eeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHH
Confidence            6899999999999999887889999997543 345678888753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=96.97  E-value=0.001  Score=48.70  Aligned_cols=42  Identities=33%  Similarity=0.414  Sum_probs=31.5

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...++..||+|.++... ...++|.+|++
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~   71 (283)
T 3gen_A           30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAK   71 (283)
T ss_dssp             EECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHH
T ss_pred             hhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHH
Confidence            5899999999999999888899999997543 33567877775

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=96.97  E-value=0.00072  Score=52.05  Aligned_cols=44  Identities=30%  Similarity=0.491  Sum_probs=30.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||++.. .+|..||+|.++.......++|.+|+++
T Consensus        95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~  139 (373)
T 2x4f_A           95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISV  139 (373)
T ss_dssp             EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHH
T ss_pred             eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHH
Confidence            4799999999999987 5688999999976544456778888753

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=96.96  E-value=0.00081  Score=54.29  Aligned_cols=43  Identities=33%  Similarity=0.456  Sum_probs=35.3

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|.||.||+|...++..||||.++... ...++|.+|+++
T Consensus       273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~  315 (535)
T 2h8h_A          273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQV  315 (535)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHH
T ss_pred             eecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHH
Confidence            6799999999999999887889999997643 345678888753

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=96.94  E-value=0.00095  Score=48.45  Aligned_cols=42  Identities=31%  Similarity=0.396  Sum_probs=34.2

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...++..||+|.++... ...++|.+|++
T Consensus        14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~   55 (268)
T 3sxs_A           14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQ   55 (268)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHH
T ss_pred             eeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHH
Confidence            5899999999999999888899999997543 23466777765

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=96.92  E-value=0.0011  Score=50.25  Aligned_cols=43  Identities=19%  Similarity=0.329  Sum_probs=34.0

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...++..||||.+....  ....+.|.+|++
T Consensus        15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~   59 (343)
T 3dbq_A           15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA   59 (343)
T ss_dssp             EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred             EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHH
Confidence            5899999999999999889999999996432  223466777764

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=96.91  E-value=0.00052  Score=51.86  Aligned_cols=44  Identities=27%  Similarity=0.323  Sum_probs=33.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC---CcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD---SHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~---~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.- .+|..||+|.++..   .....+.|.+|+++
T Consensus        38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~i   85 (311)
T 4aw0_A           38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV   85 (311)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHH
Confidence            6899999999999986 57889999999532   12334678888754

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=96.90  E-value=0.0015  Score=48.54  Aligned_cols=42  Identities=21%  Similarity=0.275  Sum_probs=33.7

Q ss_pred             hccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      .||+|.||.||++.- .++..||||.++.........+.+|++
T Consensus        20 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~   62 (316)
T 2ac3_A           20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVE   62 (316)
T ss_dssp             CCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHH
T ss_pred             eecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHH
Confidence            799999999999986 478899999996654444567777764

>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B

Probab=96.89  E-value=0.00078  Score=33.22  Aligned_cols=31  Identities=26%  Similarity=0.234  Sum_probs=25.1

Q ss_pred             CcCCcceeehhhHHHHHHHHHHHHHHHhhhh
Q 031038            2 VHKSDLVIIGICVGLALGILIATLVFFGLRW   32 (167)
Q Consensus         2 ~~~s~~~ii~ii~g~~~~v~~i~~~~~~~~~   32 (167)
                      .+++.+.++||++|.+++.+++++++++|.|
T Consensus         2 ~~L~~gaIaGIVvgdi~~t~~i~~~vy~~~r   32 (33)
T 2l34_A            2 STVSPGVLAGIVVGDLVLTVLIALAVYFLGR   32 (33)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cccCcceEEeEeHHHHHHHHHHHHHHhheec
Confidence            3678899999999999988877777777654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=96.86  E-value=0.0011  Score=48.33  Aligned_cols=42  Identities=29%  Similarity=0.410  Sum_probs=34.1

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|...++..||+|.+.... ...+.|.+|++
T Consensus        19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~   60 (279)
T 1qpc_A           19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEAN   60 (279)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHH
T ss_pred             eeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHH
Confidence            5899999999999999888899999996542 23567777765

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=96.86  E-value=0.0012  Score=51.13  Aligned_cols=43  Identities=19%  Similarity=0.329  Sum_probs=34.2

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...++..||||.++...  ....+.|.+|+.
T Consensus        62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~  106 (390)
T 2zmd_A           62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA  106 (390)
T ss_dssp             EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred             EEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHH
Confidence            6899999999999999888999999995432  233467777764

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=96.79  E-value=0.0016  Score=47.80  Aligned_cols=43  Identities=23%  Similarity=0.393  Sum_probs=32.7

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      .+||+|+||.||+|.. .++..||+|.+........+.|.+|+.
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~   71 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIA   71 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHH
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHH
Confidence            3899999999999996 567899999997654444567777764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=96.79  E-value=0.0016  Score=48.83  Aligned_cols=44  Identities=30%  Similarity=0.540  Sum_probs=35.4

Q ss_pred             hhccccccccEEEEEc-----CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-----~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.+     .+|..||||.+........+.|.+|++.
T Consensus        47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~   95 (326)
T 2w1i_A           47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI   95 (326)
T ss_dssp             EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHH
Confidence            6899999999999985     3678999999976655555778888753

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=96.75  E-value=0.0013  Score=51.89  Aligned_cols=40  Identities=28%  Similarity=0.535  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||+|... |..||||.++...  ..++|.+|++
T Consensus       199 ~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~  238 (450)
T 1k9a_A          199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEAS  238 (450)
T ss_dssp             EEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHH
T ss_pred             eeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHH
Confidence            68999999999999994 6899999997543  3567888875

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=96.75  E-value=0.0015  Score=50.12  Aligned_cols=42  Identities=24%  Similarity=0.218  Sum_probs=33.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC---CcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD---SHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~---~~~~~~~F~~e~  164 (167)
                      +.||+|+||.||+|.. .+|..||||.++..   .....+.|.+|+
T Consensus        79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~  124 (377)
T 3byv_A           79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEV  124 (377)
T ss_dssp             EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHH
T ss_pred             ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHH
Confidence            6899999999999997 56899999999632   223346788887

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=96.75  E-value=0.0013  Score=49.44  Aligned_cols=42  Identities=26%  Similarity=0.483  Sum_probs=32.1

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC--------cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS--------HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~--------~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||++.. +|..||||.++...        ....+.|.+|+.
T Consensus        26 ~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~   75 (336)
T 2vuw_A           26 EKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEII   75 (336)
T ss_dssp             EEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHH
T ss_pred             eeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHH
Confidence            6899999999999998 67999999996432        112356777664

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=96.74  E-value=0.0011  Score=54.01  Aligned_cols=44  Identities=27%  Similarity=0.444  Sum_probs=34.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||++.- ..|..||+|.+........+.+.+|+.+
T Consensus       163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~i  207 (573)
T 3uto_A          163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT  207 (573)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHH
T ss_pred             EEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHH
Confidence            6899999999999987 5789999999966544445667777753

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=96.74  E-value=0.0015  Score=48.81  Aligned_cols=43  Identities=28%  Similarity=0.451  Sum_probs=32.2

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCc--ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSH--QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~--~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...+|..||+|.+.....  .....+.+|++
T Consensus        27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~   71 (311)
T 3niz_A           27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREIS   71 (311)
T ss_dssp             EEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHH
T ss_pred             hhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHH
Confidence            58999999999999998899999999964322  22356777764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=96.74  E-value=0.0014  Score=48.66  Aligned_cols=43  Identities=28%  Similarity=0.290  Sum_probs=29.7

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... .|..||+|.+........++|.+|++
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~   60 (320)
T 2i6l_A           17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIK   60 (320)
T ss_dssp             EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHH
T ss_pred             EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHH
Confidence            58999999999999985 48899999997654445567877775

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=96.71  E-value=0.0014  Score=49.18  Aligned_cols=44  Identities=30%  Similarity=0.563  Sum_probs=35.3

Q ss_pred             hhccccccccEEEEEc-----CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-----~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.+     ..+..||||.+........+.|.+|+++
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~   77 (327)
T 3lxl_A           29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI   77 (327)
T ss_dssp             EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred             hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHH
Confidence            6899999999999995     4678899999976655555678888753

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=96.71  E-value=0.0014  Score=52.39  Aligned_cols=43  Identities=30%  Similarity=0.484  Sum_probs=34.7

Q ss_pred             hhccccccccEEEEEcCC-CcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPS-GGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~-g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      +.||+|.||.||+|...+ +..||||.++... ...++|.+|+.+
T Consensus       226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~  269 (495)
T 1opk_A          226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAV  269 (495)
T ss_dssp             EESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHH
T ss_pred             eEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHH
Confidence            689999999999999954 7899999997543 346788888753

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=96.70  E-value=0.0019  Score=46.73  Aligned_cols=42  Identities=26%  Similarity=0.376  Sum_probs=34.3

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++...++..||+|.+.... ...++|.+|++
T Consensus        14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~   55 (267)
T 3t9t_A           14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAE   55 (267)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHH
T ss_pred             eEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHH
Confidence            5899999999999999888899999997643 23467777765

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=96.69  E-value=0.0016  Score=49.00  Aligned_cols=44  Identities=25%  Similarity=0.386  Sum_probs=33.5

Q ss_pred             hhccccccccEEEEEcC----CCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP----SGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~----~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|...    .+..||||.++... ....++|.+|+++
T Consensus        55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~  103 (325)
T 3kul_A           55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI  103 (325)
T ss_dssp             EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHH
Confidence            68999999999999983    34469999997643 3335678888753

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=96.69  E-value=0.00048  Score=51.44  Aligned_cols=30  Identities=33%  Similarity=0.555  Sum_probs=26.5

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||+|... +|..||||++...
T Consensus        63 ~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~   93 (311)
T 3p1a_A           63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSP   93 (311)
T ss_dssp             EEEEEETTEEEEEEEETTTSCEEEEEEESSS
T ss_pred             heeccCCCeEEEEEEECCCCeEEEEEEeccc
Confidence            78999999999999985 7899999998553

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=96.67  E-value=0.00075  Score=51.13  Aligned_cols=55  Identities=22%  Similarity=0.396  Sum_probs=37.9

Q ss_pred             HHHHHHhhhhh--hhccccccccEEEEEc------CCCcEEEEEEeccCCc-ccHHHHHHHHhh
Q 031038          112 KDIQKATQNFT--NILGQGAFGPVYKATM------PSGGVAAIKVLASDSH-QGEKEFQTEVRA  166 (167)
Q Consensus       112 ~~l~~~~~~f~--~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~~-~~~~~F~~e~~~  166 (167)
                      .+......+|.  ..||+|+||.||++..      .++..||||.++.... ...+.|.+|+++
T Consensus        15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   78 (359)
T 3vhe_A           15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI   78 (359)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHH
Confidence            33333344554  7899999999999974      3457899999975432 334668888753

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=96.67  E-value=0.0017  Score=48.44  Aligned_cols=43  Identities=33%  Similarity=0.440  Sum_probs=33.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||++.. .+|..||+|.+........+.|.+|+.
T Consensus        34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~   77 (337)
T 3ll6_A           34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVC   77 (337)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHH
T ss_pred             EEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHH
Confidence            6899999999999996 478899999996554444566777664

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=96.64  E-value=0.0025  Score=46.95  Aligned_cols=43  Identities=40%  Similarity=0.667  Sum_probs=32.8

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... ++..+|+|.+........+.|..|++
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~   68 (302)
T 2j7t_A           25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE   68 (302)
T ss_dssp             EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHH
T ss_pred             ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHH
Confidence            58999999999999985 57899999997655555677877765

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=96.63  E-value=0.001  Score=51.20  Aligned_cols=44  Identities=25%  Similarity=0.420  Sum_probs=33.3

Q ss_pred             hhccccccccEEEEEcC----CCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP----SGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~----~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|...    .+..||||.++... ....++|.+|+.+
T Consensus        51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   99 (373)
T 2qol_A           51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI   99 (373)
T ss_dssp             EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHH
Confidence            68999999999999874    46789999996543 3335678888753

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=96.62  E-value=0.0024  Score=47.47  Aligned_cols=43  Identities=19%  Similarity=0.329  Sum_probs=33.8

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...++..||||.+....  ....+.|.+|++
T Consensus        34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~   78 (313)
T 3cek_A           34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA   78 (313)
T ss_dssp             EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHH
T ss_pred             EEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHH
Confidence            6899999999999999889999999995432  223466777764

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=96.62  E-value=0.0019  Score=47.82  Aligned_cols=43  Identities=28%  Similarity=0.406  Sum_probs=33.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .+|..||+|.+........+.|.+|+.
T Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~   69 (297)
T 3fxz_A           26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL   69 (297)
T ss_dssp             EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHH
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHH
Confidence            5899999999999985 578899999996544444566777764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=96.61  E-value=0.0018  Score=48.32  Aligned_cols=43  Identities=33%  Similarity=0.532  Sum_probs=33.4

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC--cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS--HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~--~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.. .|..||||.+....  ....++|.+|+++
T Consensus        43 ~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~   87 (309)
T 3p86_A           43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAI   87 (309)
T ss_dssp             EEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHH
T ss_pred             eEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHH
Confidence            6899999999999998 67899999996543  2234678887753

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=96.60  E-value=0.0023  Score=47.79  Aligned_cols=43  Identities=33%  Similarity=0.406  Sum_probs=33.1

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|... +|..||||.++... ....+.|.+|++
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   59 (319)
T 4euu_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE   59 (319)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHH
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHH
Confidence            58999999999999985 48899999996533 233466777764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=96.60  E-value=0.00092  Score=51.41  Aligned_cols=43  Identities=23%  Similarity=0.441  Sum_probs=33.2

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|... ++..||||.++.... ....+|.+|++
T Consensus       120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~  164 (377)
T 3cbl_A          120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR  164 (377)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHH
T ss_pred             eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHH
Confidence            68999999999999995 788999999965422 22356777764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=96.60  E-value=0.0005  Score=52.26  Aligned_cols=33  Identities=27%  Similarity=0.444  Sum_probs=27.8

Q ss_pred             hhhh--hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          119 QNFT--NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       119 ~~f~--~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..|.  ..||+|+||.||++.. .++..||||.++.
T Consensus        35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~   70 (360)
T 3llt_A           35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN   70 (360)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS
T ss_pred             CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc
Confidence            3454  6899999999999988 5678999999964

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=96.59  E-value=0.0015  Score=50.20  Aligned_cols=41  Identities=29%  Similarity=0.417  Sum_probs=29.9

Q ss_pred             hhccccccccEEEEEc----CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM----PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l----~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++.-    ..+..||+|.+....  ....+.+|++
T Consensus        27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~   71 (361)
T 4f9c_A           27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQ   71 (361)
T ss_dssp             EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHH
T ss_pred             EEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHH
Confidence            6899999999999974    245789999995542  2345566654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=96.59  E-value=0.0018  Score=46.83  Aligned_cols=43  Identities=21%  Similarity=0.368  Sum_probs=33.9

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC--cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS--HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~--~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.. .+..+|||.+....  ....++|.+|+..
T Consensus        16 ~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~   60 (271)
T 3kmu_A           16 TKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPR   60 (271)
T ss_dssp             EEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGG
T ss_pred             HHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHH
Confidence            5899999999999999 47899999996543  2334678888753

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=96.57  E-value=0.0022  Score=47.53  Aligned_cols=29  Identities=17%  Similarity=0.312  Sum_probs=26.5

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      +.||+|+||.||+|...+|..||+|.++.
T Consensus        96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~  124 (282)
T 1zar_A           96 KLMGEGKESAVFNCYSEKFGECVVKFHKV  124 (282)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC
T ss_pred             CEeccCCCceEEEEEeCCCCEEEEEEEEC
Confidence            68999999999999997789999999954

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=96.56  E-value=0.00047  Score=51.54  Aligned_cols=42  Identities=36%  Similarity=0.703  Sum_probs=32.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|.. .+|..||+|.+.... ....+|.+|+.
T Consensus        30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~   72 (326)
T 2x7f_A           30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEIN   72 (326)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHH
T ss_pred             EEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHH
Confidence            6899999999999998 578899999996432 23456666654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=96.55  E-value=0.0022  Score=47.70  Aligned_cols=43  Identities=28%  Similarity=0.322  Sum_probs=32.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .+|..||||.+........+.|.+|++
T Consensus        35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~   78 (317)
T 2buj_A           35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREAD   78 (317)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHH
T ss_pred             EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHH
Confidence            6899999999999987 578899999996654445567777765

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=96.54  E-value=0.0034  Score=45.92  Aligned_cols=43  Identities=40%  Similarity=0.553  Sum_probs=32.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCccc-------HHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQG-------EKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~-------~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .++..||+|.+.......       .+.|.+|++
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~   75 (287)
T 4f0f_A           25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF   75 (287)
T ss_dssp             EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHH
T ss_pred             hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHH
Confidence            5899999999999998 578899999995432211       156777764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=96.53  E-value=0.0024  Score=47.69  Aligned_cols=43  Identities=30%  Similarity=0.490  Sum_probs=33.1

Q ss_pred             hhccccccccEEEEEcC-----CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-----SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-----~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++++.     ++..||||.++... ....+.|.+|++
T Consensus        37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   85 (318)
T 3lxp_A           37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEID   85 (318)
T ss_dssp             EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred             heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHH
Confidence            58999999999999862     57789999997543 233466777775

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=96.49  E-value=0.003  Score=46.30  Aligned_cols=42  Identities=31%  Similarity=0.393  Sum_probs=32.7

Q ss_pred             hccccccccEEEEEcC---CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATMP---SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~---~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      .||+|+||.||+|...   ++..||+|.++... ....++|.+|++
T Consensus        17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   62 (287)
T 1u59_A           17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ   62 (287)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHH
T ss_pred             cccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHH
Confidence            8999999999999863   56789999997643 333467877775

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=96.46  E-value=0.003  Score=46.75  Aligned_cols=43  Identities=23%  Similarity=0.486  Sum_probs=31.0

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... +|..||+|.++.......+.|.+|++
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~   58 (304)
T 2jam_A           15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIA   58 (304)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHH
T ss_pred             eeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHH
Confidence            68999999999999874 68899999997544334456777664

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=96.46  E-value=0.0029  Score=48.51  Aligned_cols=43  Identities=28%  Similarity=0.462  Sum_probs=32.3

Q ss_pred             hhccccccccEEEEEc--------CCCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM--------PSGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l--------~~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++..        .++..||||.++.... ...++|.+|++
T Consensus        87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~  138 (370)
T 2psq_A           87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME  138 (370)
T ss_dssp             EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHH
T ss_pred             eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHH
Confidence            6899999999999986        2345799999976432 23467877775

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=96.45  E-value=0.0029  Score=47.39  Aligned_cols=40  Identities=25%  Similarity=0.409  Sum_probs=29.9

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      ..||+|+||.||+|... +..||||.+.... .....+..|+
T Consensus        30 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~   69 (322)
T 3soc_A           30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEV   69 (322)
T ss_dssp             EEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHH
T ss_pred             heecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHH
Confidence            68999999999999985 6899999996442 2233444455

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=96.42  E-value=0.003  Score=45.97  Aligned_cols=43  Identities=23%  Similarity=0.312  Sum_probs=34.3

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... ++..+|+|.+........+.|.+|++
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~   58 (277)
T 3f3z_A           15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIE   58 (277)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHH
T ss_pred             eEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHH
Confidence            68999999999999984 46789999996644445677888775

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=96.40  E-value=0.0025  Score=52.33  Aligned_cols=43  Identities=30%  Similarity=0.377  Sum_probs=33.6

Q ss_pred             hccccccccEEEEEcC---CCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          124 ILGQGAFGPVYKATMP---SGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~---~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      .||+|.||.||+|.+.   ++..||||.++... ....++|.+|+++
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~i  389 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI  389 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHH
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHH
Confidence            6899999999999883   45679999997643 3346789888753

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=96.38  E-value=0.0036  Score=48.38  Aligned_cols=43  Identities=33%  Similarity=0.406  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|... +|..||||.++... ....+.|.+|++
T Consensus        15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~   59 (396)
T 4eut_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE   59 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHH
T ss_pred             EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHH
Confidence            58999999999999984 58899999996533 233456667764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=96.36  E-value=0.0045  Score=45.73  Aligned_cols=43  Identities=9%  Similarity=-0.075  Sum_probs=32.8

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcc---cHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQ---GEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~---~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... .|..||||.+......   ..+.|.+|+.
T Consensus        37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~   83 (286)
T 3uqc_A           37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTL   83 (286)
T ss_dssp             EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHH
T ss_pred             EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHH
Confidence            48999999999999984 4889999999654322   2356777764

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=96.35  E-value=0.0038  Score=47.75  Aligned_cols=43  Identities=37%  Similarity=0.493  Sum_probs=32.4

Q ss_pred             hhccccccccEEEEEcC------CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP------SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|.+.      .+..||||.++... .....+|..|+.
T Consensus        77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~  126 (367)
T 3l9p_A           77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL  126 (367)
T ss_dssp             EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHH
T ss_pred             eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHH
Confidence            68999999999999963      35689999996543 333456777764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=96.33  E-value=0.004  Score=45.83  Aligned_cols=43  Identities=28%  Similarity=0.436  Sum_probs=31.6

Q ss_pred             hhccccccccEEEEEc-----CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-----PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-----~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.+     .++..||+|.+.... ....+.|.+|++
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   75 (302)
T 4e5w_A           27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIE   75 (302)
T ss_dssp             EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHH
T ss_pred             hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHH
Confidence            5899999999999994     467899999996533 333467777764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=96.29  E-value=0.0007  Score=53.41  Aligned_cols=39  Identities=28%  Similarity=0.578  Sum_probs=30.0

Q ss_pred             HHHHHhhhhh--hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          113 DIQKATQNFT--NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       113 ~l~~~~~~f~--~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ++...+.+|.  +.||+|+||.||++... ++..+|+|.++.
T Consensus        68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~  109 (437)
T 4aw2_A           68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNK  109 (437)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEH
T ss_pred             cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEH
Confidence            3333345565  78999999999999985 477899999953

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=96.28  E-value=0.0012  Score=49.63  Aligned_cols=43  Identities=28%  Similarity=0.437  Sum_probs=26.9

Q ss_pred             hhccccccccEEEEEc----CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM----PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l----~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.-    ..+..||+|.++...  ......|..|++
T Consensus        30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~   78 (304)
T 3ubd_A           30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD   78 (304)
T ss_dssp             EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------C
T ss_pred             EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHH
Confidence            5899999999999975    246789999995432  222345777764

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=96.26  E-value=0.0033  Score=47.29  Aligned_cols=49  Identities=27%  Similarity=0.501  Sum_probs=35.2

Q ss_pred             Hhhhhh--hhccccccccEEEEEc-CCCcEEEEEEeccC-----CcccHHHHHHHHh
Q 031038          117 ATQNFT--NILGQGAFGPVYKATM-PSGGVAAIKVLASD-----SHQGEKEFQTEVR  165 (167)
Q Consensus       117 ~~~~f~--~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~-----~~~~~~~F~~e~~  165 (167)
                      ....|.  ..||+|+||.||++.. .++..+|+|.+...     .....+.|.+|++
T Consensus        24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~   80 (345)
T 3hko_A           24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR   80 (345)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHH
T ss_pred             hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHH
Confidence            334554  7899999999999987 46788999998532     2233467777765

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=96.24  E-value=0.0061  Score=46.03  Aligned_cols=43  Identities=28%  Similarity=0.418  Sum_probs=32.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .+|..||+|.+....  ......+.+|++
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~   68 (351)
T 3mi9_A           23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK   68 (351)
T ss_dssp             EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHH
T ss_pred             EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHH
Confidence            6899999999999998 578899999985432  222356666664

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=96.22  E-value=0.0034  Score=47.89  Aligned_cols=30  Identities=27%  Similarity=0.425  Sum_probs=26.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||++.- ..|..||||.++..
T Consensus        64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~   94 (336)
T 4g3f_A           64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE   94 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETT
T ss_pred             cEeccCCCeEEEEEEECCCCCEEEEEEECHH
Confidence            5799999999999986 56899999999653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=96.21  E-value=0.0041  Score=48.17  Aligned_cols=43  Identities=26%  Similarity=0.387  Sum_probs=34.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++.. .+|..+|+|.+..........|.+|++
T Consensus        57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~  100 (387)
T 1kob_A           57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEIS  100 (387)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHH
T ss_pred             EEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHH
Confidence            6899999999999987 467899999997654444556777775

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=96.21  E-value=0.0045  Score=48.67  Aligned_cols=44  Identities=25%  Similarity=0.286  Sum_probs=25.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.- .+|..||||++....  ....+.|.+|+++
T Consensus        59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~  105 (458)
T 3rp9_A           59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAI  105 (458)
T ss_dssp             CC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred             eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHH
Confidence            6899999999999986 468899999995432  2234667777753

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=96.20  E-value=0.0043  Score=48.61  Aligned_cols=41  Identities=24%  Similarity=0.433  Sum_probs=30.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      +.||+|+||.||++.. .++..||||.++... ....++..|+
T Consensus       103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~  144 (429)
T 3kvw_A          103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEI  144 (429)
T ss_dssp             EEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHH
T ss_pred             EEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHH
Confidence            6899999999999977 457899999996542 2234455554

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=96.20  E-value=0.0064  Score=44.57  Aligned_cols=43  Identities=30%  Similarity=0.421  Sum_probs=33.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++.. .++..+|+|.+.... ....+.|.+|++
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~   72 (285)
T 3is5_A           28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIE   72 (285)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHH
T ss_pred             ceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHH
Confidence            6899999999999987 467899999995532 334567777765

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=96.18  E-value=0.0047  Score=45.63  Aligned_cols=43  Identities=33%  Similarity=0.552  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEc------CCCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM------PSGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++..      .++..||||.++.... ...+.|.+|+.
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   78 (313)
T 1t46_A           29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK   78 (313)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred             HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHH
Confidence            6899999999999985      3567899999975433 23466777765

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=96.18  E-value=0.0048  Score=46.49  Aligned_cols=43  Identities=30%  Similarity=0.435  Sum_probs=32.9

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|... +|..||||.++.... .....|.+|++
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~   61 (353)
T 2b9h_A           17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK   61 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHH
T ss_pred             eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHH
Confidence            58999999999999974 688999999965332 23456777764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=96.17  E-value=0.0054  Score=46.29  Aligned_cols=43  Identities=28%  Similarity=0.417  Sum_probs=33.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC--CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD--SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~--~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .+|..||||.+...  .....+.+.+|++
T Consensus        21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~   66 (328)
T 3fe3_A           21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVR   66 (328)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHH
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHH
Confidence            5899999999999987 57899999999543  2233456777765

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=96.17  E-value=0.0046  Score=47.24  Aligned_cols=42  Identities=26%  Similarity=0.307  Sum_probs=31.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .++..||||.++.. ....+.+.+|++
T Consensus        43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~   85 (397)
T 1wak_A           43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIR   85 (397)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHH
T ss_pred             EEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHH
Confidence            6899999999999985 56789999999643 223455666654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=96.17  E-value=0.0054  Score=46.62  Aligned_cols=43  Identities=35%  Similarity=0.496  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcc---cHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQ---GEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~---~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|.- .+|..||||.+......   ..++|.+|++
T Consensus        60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~  106 (348)
T 1u5q_A           60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR  106 (348)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHH
T ss_pred             eEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHH
Confidence            6899999999999985 57889999999653322   2356777765

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=96.16  E-value=0.0037  Score=46.62  Aligned_cols=44  Identities=32%  Similarity=0.551  Sum_probs=29.7

Q ss_pred             hhccccccccEEEEEcCCCc----EEEEEEeccC--CcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPSGG----VAAIKVLASD--SHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~----~vavk~l~~~--~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++......    .||||.++..  .....++|.+|++.
T Consensus        29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   78 (323)
T 3qup_A           29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAAC   78 (323)
T ss_dssp             EEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHH
T ss_pred             ceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHH
Confidence            68999999999999985432    7999999653  23345678888753

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=96.14  E-value=0.0079  Score=44.34  Aligned_cols=43  Identities=28%  Similarity=0.536  Sum_probs=33.5

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|.. .++..||+|.++... ....+.|.+|+.
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~   72 (303)
T 3a7i_A           28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT   72 (303)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHH
T ss_pred             hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHH
Confidence            5899999999999986 468899999996533 334567777764

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=96.14  E-value=0.0053  Score=44.83  Aligned_cols=42  Identities=31%  Similarity=0.479  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... .+..||+|.+.... ...+.|.+|++
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~   61 (288)
T 3kfa_A           19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAA   61 (288)
T ss_dssp             EESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHH
T ss_pred             eecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHH
Confidence            68999999999999985 47889999996542 33567777764

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=96.13  E-value=0.0046  Score=46.36  Aligned_cols=43  Identities=33%  Similarity=0.589  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEcC------CCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP------SGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...      ++..||||.++.... ...+.|.+|+.
T Consensus        53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~  102 (343)
T 1luf_A           53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA  102 (343)
T ss_dssp             EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHH
Confidence            68999999999999984      347899999975432 23467888775

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=96.12  E-value=0.0063  Score=45.99  Aligned_cols=40  Identities=33%  Similarity=0.485  Sum_probs=21.7

Q ss_pred             HHHHHhhhhh--hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          113 DIQKATQNFT--NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       113 ~l~~~~~~f~--~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ........|.  ..||+|+||.||+|.. .+|..||||.+...
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   59 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD   59 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC
Confidence            3444455665  7999999999999998 46889999998543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=96.12  E-value=0.0048  Score=46.32  Aligned_cols=43  Identities=30%  Similarity=0.473  Sum_probs=31.4

Q ss_pred             hhccccccccEEEEEcC--------CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP--------SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~--------~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...        ++..||+|.++... ....++|.+|++
T Consensus        41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   92 (334)
T 2pvf_A           41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME   92 (334)
T ss_dssp             EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             eEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHH
Confidence            68999999999999862        46789999996543 233456777764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=96.11  E-value=0.0044  Score=47.58  Aligned_cols=44  Identities=32%  Similarity=0.440  Sum_probs=32.4

Q ss_pred             hhccccccccEEEEEc--------CCCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM--------PSGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l--------~~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++..        ..+..||||.++... .....+|.+|+++
T Consensus        75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~  127 (382)
T 3tt0_A           75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM  127 (382)
T ss_dssp             EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHH
Confidence            6899999999999985        233579999996643 2334667777653

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=96.11  E-value=0.0083  Score=45.01  Aligned_cols=43  Identities=26%  Similarity=0.338  Sum_probs=32.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCc------ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSH------QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~------~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .+|..+|+|.++....      ...++|.+|+.
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~   66 (326)
T 2y0a_A           17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS   66 (326)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHH
T ss_pred             eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHH
Confidence            6899999999999987 4688999999954321      13466777765

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=96.11  E-value=0.0047  Score=45.51  Aligned_cols=29  Identities=31%  Similarity=0.436  Sum_probs=23.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      +.||+|+||.||++.. .++..||||.+..
T Consensus        19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~   48 (298)
T 2zv2_A           19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSK   48 (298)
T ss_dssp             EEEEC--CCEEEEEEETTTTEEEEEEEEEC
T ss_pred             eEEeecCCEEEEEEEECCCCcEEEEEEeeh
Confidence            5899999999999986 4678999999954

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=96.09  E-value=0.0035  Score=46.44  Aligned_cols=43  Identities=28%  Similarity=0.507  Sum_probs=32.6

Q ss_pred             hhccccccccEEEEEc------CCCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM------PSGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++..      .++..||||.++.... ...+.|.+|++
T Consensus        33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   82 (316)
T 2xir_A           33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK   82 (316)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred             eEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHH
Confidence            7899999999999974      3567899999965432 23456777765

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=96.09  E-value=0.0066  Score=44.91  Aligned_cols=43  Identities=23%  Similarity=0.380  Sum_probs=31.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||++.. .+|..||+|.+....   .....+|.+|+.
T Consensus        38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~   84 (310)
T 2wqm_A           38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEID   84 (310)
T ss_dssp             EEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHH
T ss_pred             EeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHH
Confidence            6899999999999986 578899999996432   223456777764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=96.09  E-value=0.0012  Score=51.61  Aligned_cols=34  Identities=32%  Similarity=0.651  Sum_probs=28.5

Q ss_pred             hhhhh--hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          118 TQNFT--NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       118 ~~~f~--~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..+|.  ..||+|+||.||++.. .+|..+|+|.++.
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k   96 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNK   96 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEH
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeH
Confidence            34554  7899999999999998 4688999999954

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=96.08  E-value=0.015  Score=43.42  Aligned_cols=39  Identities=28%  Similarity=0.600  Sum_probs=30.4

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||+|.. +|..||||.++..   ....|..|.+
T Consensus        48 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~   86 (342)
T 1b6c_B           48 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAE   86 (342)
T ss_dssp             EEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHH
T ss_pred             eeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHH
Confidence            7999999999999998 5789999999543   2345555543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=96.08  E-value=0.0048  Score=47.44  Aligned_cols=44  Identities=32%  Similarity=0.436  Sum_probs=32.8

Q ss_pred             hhccccccccEEEEEcC--CC--cEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP--SG--GVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~--~g--~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||+|...  ++  ..||||.++... ....++|.+|+.+
T Consensus        95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~i  143 (373)
T 3c1x_A           95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII  143 (373)
T ss_dssp             EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTT
T ss_pred             cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHH
Confidence            58999999999999973  32  368999996533 3345778888753

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=96.07  E-value=0.0075  Score=44.99  Aligned_cols=40  Identities=23%  Similarity=0.483  Sum_probs=31.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .++..||+|.++...   .+.|.+|++
T Consensus        42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~   82 (330)
T 3nsz_A           42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIK   82 (330)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHH
T ss_pred             EEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHH
Confidence            6899999999999975 678899999997542   445666654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=96.07  E-value=0.0053  Score=50.68  Aligned_cols=44  Identities=27%  Similarity=0.388  Sum_probs=32.9

Q ss_pred             hhccccccccEEEEEcC---CCcEEEEEEeccCC--cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP---SGGVAAIKVLASDS--HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~---~g~~vavk~l~~~~--~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.+.   .+..||||.++...  ....++|.+|+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~i  423 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV  423 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHH
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHH
Confidence            37999999999999763   45689999996532  2335778888753

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=96.06  E-value=0.0049  Score=46.91  Aligned_cols=39  Identities=33%  Similarity=0.474  Sum_probs=28.6

Q ss_pred             hhccccccccEEEEE------cCCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKAT------MPSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~------l~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      +.||+|+||.||+|.      ...+..||||.++...   ..+|..|+
T Consensus        71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~  115 (365)
T 3e7e_A           71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGT  115 (365)
T ss_dssp             EEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHH
T ss_pred             EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHH
Confidence            689999999999994      4567899999996543   33455444

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=96.05  E-value=0.0084  Score=43.50  Aligned_cols=43  Identities=30%  Similarity=0.410  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... ++..||+|.++...  .....++..|+.
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~   62 (289)
T 1x8b_A           17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVY   62 (289)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHH
T ss_pred             hhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHH
Confidence            68999999999999984 78899999996532  233456666663

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=96.03  E-value=0.0065  Score=45.55  Aligned_cols=43  Identities=26%  Similarity=0.336  Sum_probs=32.8

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... +|..||+|.++...  .....++.+|+.
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~   80 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIA   80 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHH
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHH
Confidence            67999999999999874 68899999996422  233466777764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=96.01  E-value=0.0062  Score=44.35  Aligned_cols=40  Identities=28%  Similarity=0.541  Sum_probs=31.3

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .|..||||.++...  ..+.|.+|++
T Consensus        27 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~   66 (278)
T 1byg_A           27 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEAS   66 (278)
T ss_dssp             EEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHH
T ss_pred             eEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHH
Confidence            6899999999999998 57899999996542  3456777764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=96.00  E-value=0.0075  Score=45.90  Aligned_cols=43  Identities=26%  Similarity=0.285  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .++..||+|.+..... ...+.|.+|++
T Consensus        33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~   77 (364)
T 3qyz_A           33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK   77 (364)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHH
Confidence            5899999999999986 4678899999975332 23366777765

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=96.00  E-value=0.0057  Score=44.28  Aligned_cols=42  Identities=33%  Similarity=0.556  Sum_probs=29.4

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCc----ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSH----QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~----~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .|..+|||.+.....    ...+.|.+|++
T Consensus        13 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~   58 (271)
T 3dtc_A           13 EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAK   58 (271)
T ss_dssp             EEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHH
T ss_pred             eeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHH
Confidence            4899999999999998 478999999854322    12356776664

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=95.99  E-value=0.0067  Score=44.45  Aligned_cols=43  Identities=30%  Similarity=0.407  Sum_probs=31.6

Q ss_pred             hhccccccccEEEEEcC-CC---cEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SG---GVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g---~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|... ++   ..+|+|.+..... ...+.|.+|+.
T Consensus        27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~   74 (298)
T 3pls_A           27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGL   74 (298)
T ss_dssp             EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHH
T ss_pred             ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHH
Confidence            58999999999999863 22   3699999975433 33467777764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=95.99  E-value=0.007  Score=46.19  Aligned_cols=42  Identities=14%  Similarity=0.078  Sum_probs=31.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCc---ccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSH---QGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~---~~~~~F~~e~  164 (167)
                      ..||+|+||.||+|.. .+|..||||.+.....   ...+.|.+|+
T Consensus        68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~  113 (371)
T 3q60_A           68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEAT  113 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHH
T ss_pred             eeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHH
Confidence            5899999999999996 4788999999966432   2234555653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=95.98  E-value=0.0066  Score=46.94  Aligned_cols=41  Identities=24%  Similarity=0.319  Sum_probs=25.9

Q ss_pred             hhccccccccEEEEEcC---CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP---SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~---~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...   ++..||+|.++...  ....+.+|++
T Consensus        27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~   70 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIA   70 (405)
T ss_dssp             CCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHH
T ss_pred             cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHH
Confidence            47999999999999974   46789999996532  2345666664

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=95.98  E-value=0.009  Score=44.77  Aligned_cols=43  Identities=26%  Similarity=0.451  Sum_probs=32.0

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCc--ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSH--QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~--~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... +|..||+|.+.....  ...+.|.+|++
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~   76 (331)
T 4aaa_A           31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK   76 (331)
T ss_dssp             EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHH
T ss_pred             eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHH
Confidence            58999999999999984 588999999854322  22345666664

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=95.98  E-value=0.014  Score=44.49  Aligned_cols=30  Identities=20%  Similarity=0.417  Sum_probs=26.5

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~  152 (167)
                      +.||+|+||.||++... +|..||||.++..
T Consensus       100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~  130 (365)
T 2y7j_A          100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVT  130 (365)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEETT
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEcc
Confidence            78999999999999984 7899999998653

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=95.97  E-value=0.0068  Score=46.43  Aligned_cols=43  Identities=30%  Similarity=0.322  Sum_probs=28.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|.- .+|..||||.+....  ....+.+.+|++
T Consensus        35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~   80 (367)
T 2fst_X           35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR   80 (367)
T ss_dssp             EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHH
T ss_pred             eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHH
Confidence            5899999999999985 578899999996432  223456777764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=95.96  E-value=0.0042  Score=45.42  Aligned_cols=43  Identities=26%  Similarity=0.410  Sum_probs=33.5

Q ss_pred             hhccccccccEEEEEcCC-C-------cEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS-G-------GVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~-g-------~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|.... +       ..||+|.++.......+.|.+|++
T Consensus        14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~   64 (289)
T 4fvq_A           14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAAS   64 (289)
T ss_dssp             EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHH
T ss_pred             eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHH
Confidence            589999999999998742 2       469999997655555677888875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=95.96  E-value=0.0057  Score=45.92  Aligned_cols=43  Identities=23%  Similarity=0.394  Sum_probs=29.9

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... ++..||||.++.... ...+.|.+|+.
T Consensus        13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   57 (323)
T 3tki_A           13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC   57 (323)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHH
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHH
Confidence            38999999999999874 788999999954322 22345666654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=95.95  E-value=0.0097  Score=44.38  Aligned_cols=43  Identities=28%  Similarity=0.363  Sum_probs=32.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcc------cHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQ------GEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~------~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .+|..+|+|.++.....      ..++|.+|+.
T Consensus        18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~   67 (321)
T 2a2a_A           18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS   67 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHH
T ss_pred             eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHH
Confidence            6899999999999987 46889999999543211      2466777765

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=95.93  E-value=0.0075  Score=46.16  Aligned_cols=43  Identities=33%  Similarity=0.352  Sum_probs=26.5

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|.- .+|..||||.+....  ....+.+.+|++
T Consensus        31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~   76 (367)
T 1cm8_A           31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELR   76 (367)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHH
T ss_pred             EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHH
Confidence            5899999999999987 568899999995432  222356777764

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=95.92  E-value=0.0064  Score=47.57  Aligned_cols=43  Identities=26%  Similarity=0.315  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .+|..||||++....  ....+.|.+|++
T Consensus        32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~   77 (432)
T 3n9x_A           32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREIT   77 (432)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHH
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHH
Confidence            5899999999999987 467889999996532  223466777765

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=95.92  E-value=0.0098  Score=44.15  Aligned_cols=43  Identities=30%  Similarity=0.337  Sum_probs=33.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCccc---HHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQG---EKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~---~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .++..||||.++......   ...|.+|++
T Consensus        18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~   64 (311)
T 3ork_A           18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ   64 (311)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHT
T ss_pred             EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHH
Confidence            5899999999999985 678899999996543222   356777765

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=95.88  E-value=0.0081  Score=46.00  Aligned_cols=43  Identities=28%  Similarity=0.344  Sum_probs=32.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcc------cHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQ------GEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~------~~~~F~~e~~  165 (167)
                      ..||+|.||.||++.. .+|..+|+|.++.....      ..+.|.+|+.
T Consensus        18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~   67 (361)
T 2yab_A           18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS   67 (361)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHH
T ss_pred             eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHH
Confidence            6899999999999987 46889999999543211      2466777775

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=95.88  E-value=0.0078  Score=45.01  Aligned_cols=29  Identities=31%  Similarity=0.700  Sum_probs=25.6

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||+|.. ++..||||.++..
T Consensus        19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~   47 (336)
T 3g2f_A           19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFA   47 (336)
T ss_dssp             EEEEECSSEEEEEEEE-TTEEEEEEEEEGG
T ss_pred             eecccCCCeEEEEEEE-CCeEEEEEEeecc
Confidence            5899999999999988 6789999999643

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=95.88  E-value=0.0095  Score=45.52  Aligned_cols=43  Identities=33%  Similarity=0.322  Sum_probs=32.5

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCc--ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSH--QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~--~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .+|..||||.+.....  ...+.|.+|+.
T Consensus        48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~   93 (371)
T 4exu_A           48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL   93 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHH
Confidence            5899999999999986 4688999999965322  22356777664

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=95.87  E-value=0.0083  Score=43.70  Aligned_cols=43  Identities=26%  Similarity=0.404  Sum_probs=32.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .+|..||+|.+....  ....+.|.+|+.
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~   57 (284)
T 3kk8_A           12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR   57 (284)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHH
T ss_pred             hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHH
Confidence            3899999999999987 468899999995432  223356666664

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=95.87  E-value=0.0065  Score=44.48  Aligned_cols=42  Identities=36%  Similarity=0.419  Sum_probs=32.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .+|..||+|.+... ....+.|.+|++
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~   54 (303)
T 1zy4_A           12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVM   54 (303)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHH
T ss_pred             heeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHH
Confidence            4899999999999996 47889999999543 223456777764

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=95.86  E-value=0.011  Score=45.12  Aligned_cols=42  Identities=19%  Similarity=0.285  Sum_probs=31.8

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.-. ++..||||.+..... ..+.+.+|+.
T Consensus        26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~   68 (361)
T 3uc3_A           26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREII   68 (361)
T ss_dssp             EEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHH
T ss_pred             EEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHH
Confidence            58999999999999884 688999999965422 2345666654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=95.86  E-value=0.004  Score=46.85  Aligned_cols=28  Identities=21%  Similarity=0.283  Sum_probs=25.6

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++.. +|..||+|.+..
T Consensus        37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~   64 (348)
T 2pml_X           37 RTLNQGKFNKIILCEK-DNKFYALKKYEK   64 (348)
T ss_dssp             EEEECCSSCCEEEEEE-TTEEEEEEEEEH
T ss_pred             EEEcCCCCeEEEEEEc-CCceEEEEEeec
Confidence            5899999999999999 889999999854

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=95.86  E-value=0.009  Score=44.83  Aligned_cols=39  Identities=28%  Similarity=0.393  Sum_probs=29.7

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      ..||+|+||.||++... +|..||||.++..   ....+.+|+
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~   56 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEI   56 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHH
Confidence            47999999999999984 6889999999543   234455554

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=95.85  E-value=0.0064  Score=44.91  Aligned_cols=43  Identities=30%  Similarity=0.479  Sum_probs=32.6

Q ss_pred             hhccccccccEEEEEc------CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM------PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++..      .++..||||.++... ....+.|.+|++
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   78 (314)
T 2ivs_A           29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN   78 (314)
T ss_dssp             EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHH
Confidence            6899999999999986      345789999996543 233467777775

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=95.85  E-value=0.0023  Score=49.97  Aligned_cols=29  Identities=34%  Similarity=0.578  Sum_probs=25.4

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++... ++..+|+|.++.
T Consensus        75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k  104 (410)
T 3v8s_A           75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSK  104 (410)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEEcCCCEEEEEEEECCCCcEEEEEEEeh
Confidence            78999999999999984 578999999853

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=95.85  E-value=0.011  Score=42.84  Aligned_cols=43  Identities=23%  Similarity=0.384  Sum_probs=32.7

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... ++..||+|.++... ....+.|.+|+.
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~   57 (276)
T 2yex_A           13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC   57 (276)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHH
T ss_pred             EEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHH
Confidence            48999999999999884 68899999996432 233466777764

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=95.84  E-value=0.0097  Score=43.57  Aligned_cols=43  Identities=23%  Similarity=0.317  Sum_probs=32.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC--CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD--SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~--~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|.. .++..||+|.+...  .....+.|.+|+.
T Consensus        32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~   77 (290)
T 1t4h_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAE   77 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHH
T ss_pred             eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHH
Confidence            4799999999999987 46778999999543  2333466777764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=95.84  E-value=0.0073  Score=46.32  Aligned_cols=30  Identities=33%  Similarity=0.548  Sum_probs=25.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||+|.. .++..||||.++..
T Consensus        60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~   90 (382)
T 2vx3_A           60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK   90 (382)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECSS
T ss_pred             EEEeecCCEEEEEEEEcCCCcEEEEEEEecc
Confidence            6899999999999987 46788999999643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=95.83  E-value=0.0086  Score=45.76  Aligned_cols=43  Identities=26%  Similarity=0.404  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      +.||+|.||.||++.. .+|..+|+|.++...  ....+.|.+|+.
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~   80 (362)
T 2bdw_A           35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR   80 (362)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHH
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHH
Confidence            7899999999999987 468899999996532  223356777764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=95.83  E-value=0.0095  Score=44.51  Aligned_cols=43  Identities=40%  Similarity=0.549  Sum_probs=29.8

Q ss_pred             hhccccccccEEEEEc------CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM------PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|..      .++..||||.+.... .....+|..|+.
T Consensus        36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   85 (327)
T 2yfx_A           36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL   85 (327)
T ss_dssp             EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHH
T ss_pred             EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHH
Confidence            6899999999999985      346689999996533 334467777764

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=95.83  E-value=0.01  Score=43.06  Aligned_cols=42  Identities=24%  Similarity=0.378  Sum_probs=32.4

Q ss_pred             hccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      .||+|+||.||++.. .+|..||+|.+....  ....+.|.+|++
T Consensus        13 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~   57 (279)
T 2w5a_A           13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVN   57 (279)
T ss_dssp             EEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred             hccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHH
Confidence            899999999999988 468899999996532  223456777764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=95.82  E-value=0.0071  Score=44.37  Aligned_cols=42  Identities=33%  Similarity=0.543  Sum_probs=31.7

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC--cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS--HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~--~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|...+  .+|+|.++...  ....+.|.+|++.
T Consensus        30 ~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~   73 (289)
T 3og7_A           30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGV   73 (289)
T ss_dssp             EEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHH
T ss_pred             eEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHH
Confidence            589999999999999854  59999996533  2334678887753

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=95.82  E-value=0.0079  Score=44.77  Aligned_cols=42  Identities=26%  Similarity=0.453  Sum_probs=31.0

Q ss_pred             hhccccccccEEEEEc--CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM--PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l--~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.-  .++..||||.++... ...+.+..|++
T Consensus        20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~   63 (339)
T 1z57_A           20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQ   63 (339)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHH
T ss_pred             EEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHH
Confidence            5899999999999985  467899999996532 22345555553

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=95.82  E-value=0.01  Score=44.92  Aligned_cols=44  Identities=27%  Similarity=0.318  Sum_probs=34.1

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++... ++..||+|.+.... ....+.|.+|+..
T Consensus        39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~   84 (360)
T 3eqc_A           39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV   84 (360)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGG
T ss_pred             eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHH
Confidence            68999999999999984 68899999996543 2334678787753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=95.80  E-value=0.0081  Score=44.05  Aligned_cols=42  Identities=29%  Similarity=0.415  Sum_probs=30.0

Q ss_pred             hccccccccEEEEEc---CCCcEEEEEEeccCCc--ccHHHHHHHHh
Q 031038          124 ILGQGAFGPVYKATM---PSGGVAAIKVLASDSH--QGEKEFQTEVR  165 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l---~~g~~vavk~l~~~~~--~~~~~F~~e~~  165 (167)
                      .||+|+||.||+|..   ..+..||||.++....  ...++|.+|++
T Consensus        24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~   70 (291)
T 1xbb_A           24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN   70 (291)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHH
T ss_pred             ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHH
Confidence            899999999999965   3457899999965432  22467877765

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=95.80  E-value=0.009  Score=45.18  Aligned_cols=43  Identities=33%  Similarity=0.315  Sum_probs=32.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|.. .+|..||||.+....  ....+.|.+|+.
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~   75 (353)
T 3coi_A           30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL   75 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHH
T ss_pred             eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHH
Confidence            5899999999999987 468899999996532  222356777664

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=95.80  E-value=0.007  Score=45.49  Aligned_cols=43  Identities=30%  Similarity=0.496  Sum_probs=30.5

Q ss_pred             hhccccccccEEEEEc------CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM------PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++..      ..+..||||.+.... ....+.|.+|+.
T Consensus        51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~  100 (344)
T 1rjb_A           51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK  100 (344)
T ss_dssp             EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHH
T ss_pred             eeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHH
Confidence            6899999999999986      245679999996532 233466777765

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=95.79  E-value=0.0095  Score=43.74  Aligned_cols=43  Identities=30%  Similarity=0.424  Sum_probs=31.0

Q ss_pred             hhccccccccEEEEEcCCC----cEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPSG----GVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g----~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|...+.    ..+|+|.++.... ...+.|.+|++
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~   78 (298)
T 3f66_A           31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI   78 (298)
T ss_dssp             EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHH
T ss_pred             ceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHH
Confidence            6899999999999997332    2589999976433 33466777764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=95.79  E-value=0.0057  Score=45.88  Aligned_cols=43  Identities=42%  Similarity=0.654  Sum_probs=27.9

Q ss_pred             hhccccccccEEEEEc-CCCc----EEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGG----VAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~----~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|.. .++.    .||+|.+.... ....++|.+|+.
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~   69 (327)
T 3poz_A           21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY   69 (327)
T ss_dssp             EEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHH
T ss_pred             eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHH
Confidence            6899999999999996 3443    36899885432 344577888875

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=95.76  E-value=0.0085  Score=43.58  Aligned_cols=29  Identities=21%  Similarity=0.266  Sum_probs=25.7

Q ss_pred             hhccccccccEEEEEc-CCCcE--EEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGV--AAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~--vavk~l~~  151 (167)
                      ..||+|+||.||+|.. .+|..  ||||.++.
T Consensus        53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~   84 (258)
T 1zth_A           53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRI   84 (258)
T ss_dssp             EEEEECSSEEEEEEEEEETTEEEEEEEEEECC
T ss_pred             CEEeecceEEEEEEEEcCCCcEeeEEEEEEEC
Confidence            6899999999999998 78888  99998743

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=95.76  E-value=0.01  Score=44.29  Aligned_cols=42  Identities=31%  Similarity=0.578  Sum_probs=31.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCc-ccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSH-QGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~-~~~~~F~~e~  164 (167)
                      ..||+|+||.||++.. .+|..||||.+..... ....++..|+
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~   71 (327)
T 3aln_A           28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL   71 (327)
T ss_dssp             CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHH
T ss_pred             heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHH
Confidence            4899999999999998 4688999999965432 2334555554

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=95.75  E-value=0.012  Score=42.98  Aligned_cols=43  Identities=30%  Similarity=0.452  Sum_probs=33.5

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... ++..||+|.+....  ....+.|.+|++
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~   73 (287)
T 2wei_A           28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVE   73 (287)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHH
T ss_pred             EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHH
Confidence            78999999999999884 68899999995422  234567777764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=95.72  E-value=0.013  Score=44.48  Aligned_cols=44  Identities=18%  Similarity=0.394  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC-----CcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD-----SHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~-----~~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||++.- .+|..||||.++..     .....+.|.+|+.+
T Consensus        30 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~   79 (351)
T 3c0i_A           30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI   79 (351)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHH
T ss_pred             eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHH
Confidence            6899999999999987 46889999998431     11235677777653

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=95.72  E-value=0.0079  Score=45.15  Aligned_cols=29  Identities=34%  Similarity=0.739  Sum_probs=25.7

Q ss_pred             hhccccccccEEEEEc----CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM----PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l----~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++..    .+|..+|+|.++.
T Consensus        23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~   55 (327)
T 3a62_A           23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKK   55 (327)
T ss_dssp             EEEEEETTEEEEEEEECSSTTTTCEEEEEEECC
T ss_pred             EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEH
Confidence            6899999999999987    4788999999964

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=95.72  E-value=0.007  Score=45.73  Aligned_cols=43  Identities=28%  Similarity=0.493  Sum_probs=29.5

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCccc-----HHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQG-----EKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~-----~~~F~~e~~  165 (167)
                      ..||+|+||.||++... +|..||||.++......     .+.+.+|++
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~   64 (346)
T 1ua2_A           16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK   64 (346)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHH
T ss_pred             eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHH
Confidence            68999999999999984 58899999996432111     235666664

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=95.68  E-value=0.0062  Score=46.25  Aligned_cols=40  Identities=33%  Similarity=0.420  Sum_probs=26.1

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      ..||+|+||.||++... ++..||||.++...  ..+.|.+|+
T Consensus        59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~   99 (349)
T 2w4o_A           59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEI   99 (349)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEC------------C
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHH
Confidence            68999999999999985 57789999996532  233455554

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=95.67  E-value=0.0058  Score=45.45  Aligned_cols=43  Identities=33%  Similarity=0.472  Sum_probs=32.6

Q ss_pred             hhccccccccEEEEEcC------CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP------SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|...      .+..||+|.+.... .....+|.+|++
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~   80 (322)
T 1p4o_A           31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS   80 (322)
T ss_dssp             EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             eEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHH
Confidence            68999999999999863      35789999996543 233456888775

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=95.67  E-value=0.011  Score=42.84  Aligned_cols=30  Identities=33%  Similarity=0.629  Sum_probs=26.7

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~  152 (167)
                      +.||+|+||.||++... +|..||+|.++..
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   47 (284)
T 2a19_B           17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN   47 (284)
T ss_dssp             EEEECSSSCCEEEEEETTTCCEEEEEEEECC
T ss_pred             eeeccCCceEEEEEEEcCCCeEEEEEEeccc
Confidence            68999999999999985 7899999999654

>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}

Probab=95.65  E-value=0.011  Score=30.60  Aligned_cols=10  Identities=30%  Similarity=0.717  Sum_probs=3.9

Q ss_pred             hhhHHHHHHH
Q 031038           11 GICVGLALGI   20 (167)
Q Consensus        11 ~ii~g~~~~v   20 (167)
                      +|++|++.++
T Consensus        14 ~I~~~vv~Gv   23 (41)
T 2k9y_A           14 AVIGGVAVGV   23 (41)
T ss_dssp             HHHHHHHHHH
T ss_pred             EEEeehhHHH
Confidence            3344444333

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=95.65  E-value=0.0093  Score=47.25  Aligned_cols=43  Identities=28%  Similarity=0.210  Sum_probs=32.5

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC--CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD--SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~--~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- ..|..||||.+...  .....+.+.+|+.
T Consensus        68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~  113 (464)
T 3ttj_A           68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV  113 (464)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHH
T ss_pred             EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHH
Confidence            6899999999999975 56889999999643  2223456777764

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=95.64  E-value=0.011  Score=43.31  Aligned_cols=30  Identities=23%  Similarity=0.328  Sum_probs=26.0

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~  152 (167)
                      ..||+|.||.||++... +|..||||.++..
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   53 (298)
T 1phk_A           23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVT   53 (298)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETT
T ss_pred             eeecCCCceEEEEEEEcCcCceEEEEEEecc
Confidence            58999999999999984 6789999999643

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=95.63  E-value=0.0097  Score=45.18  Aligned_cols=29  Identities=21%  Similarity=0.517  Sum_probs=25.6

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++... ++..+|+|.++.
T Consensus        15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~   44 (345)
T 3a8x_A           15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKK   44 (345)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEG
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEh
Confidence            68999999999999984 578999999964

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=95.63  E-value=0.012  Score=43.00  Aligned_cols=43  Identities=26%  Similarity=0.327  Sum_probs=32.0

Q ss_pred             hhccccccccEEEEEcCC----CcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS----GGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~----g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|....    +..||+|.+.... ....+.|.+|+.
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~   68 (281)
T 1mp8_A           21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL   68 (281)
T ss_dssp             EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHH
T ss_pred             eEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHH
Confidence            589999999999998743    4569999986533 233466777764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=95.63  E-value=0.011  Score=44.79  Aligned_cols=42  Identities=24%  Similarity=0.345  Sum_probs=31.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .++..||||.+... ....+.+.+|++
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~   67 (373)
T 1q8y_A           25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIK   67 (373)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHH
T ss_pred             EeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHH
Confidence            5899999999999986 57889999999643 222345555543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=95.61  E-value=0.0091  Score=44.90  Aligned_cols=43  Identities=30%  Similarity=0.519  Sum_probs=31.6

Q ss_pred             hhccccccccEEEEEcCC-----CcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS-----GGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~-----g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|....     +..||||.++... .....+|.+|+.
T Consensus        50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   98 (333)
T 1mqb_A           50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAG   98 (333)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred             cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHH
Confidence            589999999999998732     2359999996543 233456877775

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=95.60  E-value=0.013  Score=44.90  Aligned_cols=43  Identities=28%  Similarity=0.446  Sum_probs=24.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC--CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD--SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~--~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .+|..||||.+...  .......+.+|+.
T Consensus        15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~   60 (388)
T 3oz6_A           15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIM   60 (388)
T ss_dssp             EC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHH
T ss_pred             EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHH
Confidence            6899999999999986 57889999999542  2223345555553

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=95.60  E-value=0.013  Score=43.91  Aligned_cols=30  Identities=23%  Similarity=0.295  Sum_probs=25.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||+|.- .+|..||||.+...
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   45 (330)
T 2izr_A           15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMK   45 (330)
T ss_dssp             EECCC-CTTSEEEEEETTTTEEEEEEEEETT
T ss_pred             EEeeccCCceEEEEEECCCCcEEEEEEeccc
Confidence            5899999999999985 57889999998543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=95.57  E-value=0.011  Score=46.18  Aligned_cols=30  Identities=43%  Similarity=0.796  Sum_probs=26.1

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~  152 (167)
                      +.||+|+||.||+|... +|..||||.+...
T Consensus        60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~   90 (420)
T 1j1b_A           60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD   90 (420)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECC
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEeccc
Confidence            58999999999999984 6889999999543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=95.57  E-value=0.014  Score=43.08  Aligned_cols=41  Identities=37%  Similarity=0.632  Sum_probs=28.0

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|... +|..||+|.+....  ..++|..|+.
T Consensus        35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~   76 (314)
T 3com_A           35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEIS   76 (314)
T ss_dssp             EECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHH
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHH
Confidence            68999999999999884 58899999996542  2356666664

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=95.51  E-value=0.0096  Score=44.65  Aligned_cols=43  Identities=30%  Similarity=0.400  Sum_probs=29.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcc--cHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQ--GEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~--~~~~F~~e~~  165 (167)
                      ..||+|.||.||++.- .++..||||.++.....  ..+.|.+|++
T Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~   85 (329)
T 3gbz_A           40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVS   85 (329)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHH
T ss_pred             EEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHH
Confidence            6899999999999985 57889999999643322  2345666654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=95.48  E-value=0.013  Score=42.74  Aligned_cols=43  Identities=30%  Similarity=0.496  Sum_probs=31.7

Q ss_pred             hhccccccccEEEEEcCC----CcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS----GGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~----g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|...+    +..||+|.+.... ....+.|.+|+.
T Consensus        18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   65 (281)
T 3cc6_A           18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV   65 (281)
T ss_dssp             EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHH
Confidence            589999999999998732    2359999996543 233467777764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=95.46  E-value=0.018  Score=42.40  Aligned_cols=43  Identities=30%  Similarity=0.336  Sum_probs=32.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCc---ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSH---QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~---~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- ..+..||+|.+.....   ...+.|.+|+.
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~   63 (294)
T 4eqm_A           17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH   63 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHH
T ss_pred             EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHH
Confidence            5899999999999985 4678999999844322   22356777764

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=95.45  E-value=0.0094  Score=46.47  Aligned_cols=29  Identities=31%  Similarity=0.405  Sum_probs=25.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||+|.. .++..||||.+..
T Consensus       141 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~  170 (419)
T 3i6u_A          141 KTLGSGACGEVKLAFERKTCKKVAIRIISK  170 (419)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEG
T ss_pred             eEEeeCCCeEEEEEEECCCCcEEEEEEEEe
Confidence            7899999999999987 4678999999854

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=95.45  E-value=0.009  Score=45.45  Aligned_cols=29  Identities=38%  Similarity=0.666  Sum_probs=25.7

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++... +|..||+|.++.
T Consensus        23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~   52 (345)
T 1xjd_A           23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKK   52 (345)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEh
Confidence            68999999999999984 678999999954

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=95.44  E-value=0.0066  Score=44.55  Aligned_cols=43  Identities=26%  Similarity=0.369  Sum_probs=20.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .++..||||.+.... ....++|.+|+.
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~   65 (303)
T 2vwi_A           21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQ   65 (303)
T ss_dssp             EECC---CCCEEEEEC----CEEEEECCC----------------
T ss_pred             heeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHH
Confidence            5899999999999987 467899999986532 233456777664

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=95.44  E-value=0.019  Score=42.79  Aligned_cols=28  Identities=29%  Similarity=0.587  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||+|... |..||||.+..
T Consensus        43 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~   70 (337)
T 3mdy_A           43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFT   70 (337)
T ss_dssp             EEEEEETTEEEEEEEET-TEEEEEEEEEG
T ss_pred             eEeecCCCeEEEEEEEC-CceEEEEEEec
Confidence            78999999999999985 78999999854

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=95.44  E-value=0.015  Score=43.13  Aligned_cols=43  Identities=26%  Similarity=0.474  Sum_probs=32.4

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcc---cHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQ---GEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~---~~~~F~~e~~  165 (167)
                      ..||+|.||.||++... ++..||+|.+......   ..+.|.+|+.
T Consensus        40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~   86 (309)
T 2h34_A           40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREAR   86 (309)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHH
T ss_pred             EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHH
Confidence            68999999999999974 6789999999653222   1356777764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=95.43  E-value=0.0087  Score=43.90  Aligned_cols=30  Identities=27%  Similarity=0.659  Sum_probs=26.4

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS  153 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~  153 (167)
                      ..||+|+||.||+|.. +|..||||.+....
T Consensus        14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~   43 (301)
T 3q4u_A           14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRD   43 (301)
T ss_dssp             EEEEECSSEEEEEEEE-TTEEEEEEEECGGG
T ss_pred             EeeccCCCcEEEEEEE-CCEEEEEEEecccc
Confidence            5899999999999998 67899999996543

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=95.43  E-value=0.01  Score=43.99  Aligned_cols=43  Identities=30%  Similarity=0.542  Sum_probs=29.0

Q ss_pred             hhccccccccEEEEEcC----CCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP----SGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~----~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|...    .+..||+|.++...  ....+.|.+|+.
T Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~   88 (313)
T 3brb_A           40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAA   88 (313)
T ss_dssp             EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHH
T ss_pred             cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHH
Confidence            68999999999999873    23479999996532  223466777765

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=95.43  E-value=0.022  Score=42.07  Aligned_cols=29  Identities=41%  Similarity=0.614  Sum_probs=25.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++.- .+|..||+|.+..
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   44 (308)
T 3g33_A           15 AEIGVGAYGTVYKARDPHSGHFVALKSVRV   44 (308)
T ss_dssp             EEECCSSSCCEEEEECTTTCCEEEEEEEEE
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEec
Confidence            6899999999999996 5688999999853

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=95.43  E-value=0.015  Score=42.44  Aligned_cols=30  Identities=40%  Similarity=0.618  Sum_probs=25.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||++.. .+|..||+|.++..
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   43 (290)
T 3fme_A           13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRAT   43 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEC--
T ss_pred             HhcCCCCCeEEEEEEecCCCeEEEEEEeecc
Confidence            4899999999999987 57889999999654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=95.42  E-value=0.01  Score=46.18  Aligned_cols=29  Identities=17%  Similarity=0.511  Sum_probs=25.4

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++... ++..+|+|.++.
T Consensus        58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k   87 (396)
T 4dc2_A           58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKK   87 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEG
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEh
Confidence            68999999999999984 577899999954

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=95.41  E-value=0.01  Score=44.16  Aligned_cols=29  Identities=34%  Similarity=0.587  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEc--CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM--PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l--~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++..  .+|..||+|.++.
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~   47 (326)
T 1blx_A           17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRV   47 (326)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEEEE
T ss_pred             eeecccccEEEEEEEecCCCCEEEEEEEecc
Confidence            5899999999999987  4678899999853

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=95.39  E-value=0.018  Score=45.60  Aligned_cols=43  Identities=28%  Similarity=0.525  Sum_probs=33.5

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.-. +|..||||.+....   ......|.+|+.
T Consensus        32 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~   78 (484)
T 3nyv_A           32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ   78 (484)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHH
T ss_pred             eEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHH
Confidence            68999999999999874 78899999995432   233567877775

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=95.39  E-value=0.013  Score=42.88  Aligned_cols=43  Identities=19%  Similarity=0.364  Sum_probs=32.1

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... ++..+|+|.+....   ....+.|..|+.
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~   67 (294)
T 2rku_A           21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEIS   67 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHH
T ss_pred             EEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHH
Confidence            58999999999999984 57789999985432   223456777764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=95.38  E-value=0.014  Score=44.65  Aligned_cols=30  Identities=37%  Similarity=0.485  Sum_probs=24.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||++.. .+|..||+|++...
T Consensus        13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~   43 (383)
T 3eb0_A           13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQD   43 (383)
T ss_dssp             EEEECC-CEEEEEEEETTTCCEEEEEEEECC
T ss_pred             EEEEeccCEEEEEEEECCCCCEEEEEEEecC
Confidence            3899999999999986 67899999998544

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=95.37  E-value=0.0086  Score=45.67  Aligned_cols=29  Identities=41%  Similarity=0.738  Sum_probs=25.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++.. .+|..+|+|.++.
T Consensus        29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~   58 (353)
T 3txo_A           29 RVLGKGSFGKVMLARVKETGDLYAVKVLKK   58 (353)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEeeCCCEEEEEEEEcCCCCEEEEEEEEH
Confidence            6899999999999987 4688999999954

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=95.35  E-value=0.016  Score=44.23  Aligned_cols=43  Identities=28%  Similarity=0.169  Sum_probs=32.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .++..||||.+....  ....+.+.+|+.
T Consensus        31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~   76 (371)
T 2xrw_A           31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELV   76 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHH
T ss_pred             eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHH
Confidence            5899999999999986 467899999996432  223356777764

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=95.32  E-value=0.014  Score=43.51  Aligned_cols=29  Identities=34%  Similarity=0.410  Sum_probs=25.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++.. .++..||||.+..
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   45 (322)
T 2ycf_A           16 KTLGSGACGEVKLAFERKTCKKVAIKIISK   45 (322)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECC
T ss_pred             eEEecCCCEEEEEEEEcCCCcEEEEEEeeh
Confidence            7899999999999987 4578999999854

>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}

Probab=95.29  E-value=0.0073  Score=31.21  Aligned_cols=25  Identities=36%  Similarity=0.461  Sum_probs=12.5

Q ss_pred             ceeehhhHHHHHHHHHHHHHHHhhhh
Q 031038            7 LVIIGICVGLALGILIATLVFFGLRW   32 (167)
Q Consensus         7 ~~ii~ii~g~~~~v~~i~~~~~~~~~   32 (167)
                      +++++++.|+++ ++++++++++++|
T Consensus        14 ~I~~~vv~Gv~l-l~~iv~~~~~~~r   38 (41)
T 2k9y_A           14 AVIGGVAVGVVL-LLVLAGVGFFIHR   38 (41)
T ss_dssp             HHHHHHHHHHHH-HHHHHHHHHSSSS
T ss_pred             EEEeehhHHHHH-HHHHHHHheeEee
Confidence            456666666665 5533333344443

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=95.28  E-value=0.013  Score=42.48  Aligned_cols=43  Identities=26%  Similarity=0.426  Sum_probs=32.2

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||++... +|..||+|.+....   ....+.|.+|+.
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~   63 (276)
T 2h6d_A           17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ   63 (276)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH
T ss_pred             eeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHH
Confidence            58999999999999984 68899999995421   122356666664

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=95.27  E-value=0.015  Score=46.18  Aligned_cols=43  Identities=28%  Similarity=0.436  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccC--CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD--SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~--~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.-. ++..||||.+...  .......+.+|++
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~   73 (486)
T 3mwu_A           28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVE   73 (486)
T ss_dssp             EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHH
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHH
Confidence            68999999999999874 6889999998532  1233566777765

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=95.27  E-value=0.018  Score=42.04  Aligned_cols=40  Identities=28%  Similarity=0.501  Sum_probs=30.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      ..||+|.||.||+|.- .+|..||||.+.....  ..+|..|+
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~   55 (296)
T 3uzp_A           15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIES   55 (296)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHH
T ss_pred             EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHH
Confidence            5899999999999995 6788999999855332  22455554

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=95.25  E-value=0.016  Score=43.42  Aligned_cols=42  Identities=21%  Similarity=0.343  Sum_probs=30.0

Q ss_pred             hhccccccccEEEEEcC--CCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP--SGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~--~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|.||.||++...  ++..||+|.++... ...+.+..|++
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~   68 (355)
T 2eu9_A           25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEIN   68 (355)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHH
T ss_pred             EEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHH
Confidence            58999999999999863  34689999996432 22345555543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=95.25  E-value=0.01  Score=44.84  Aligned_cols=30  Identities=20%  Similarity=0.220  Sum_probs=23.8

Q ss_pred             hhccccccccEEEEEcC---------CCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMP---------SGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~---------~g~~vavk~l~~~  152 (167)
                      +.||+|+||.||++...         ++..||+|.+...
T Consensus        48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~   86 (352)
T 2jii_A           48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD   86 (352)
T ss_dssp             EEEEEETTEEEEEEEECC-----------CEEEEEEETT
T ss_pred             EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc
Confidence            58999999999999985         3789999999644

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=95.25  E-value=0.012  Score=45.84  Aligned_cols=29  Identities=14%  Similarity=0.171  Sum_probs=26.5

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||+|.-++|..||||.++.
T Consensus       101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~  129 (397)
T 4gyi_A          101 SRIGVGKESDIMIVADEKGKQKVLKIHRL  129 (397)
T ss_dssp             EEEEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             CEeeeCCceEEEEEECCCCCEEEEEEEec
Confidence            68999999999999999999999998753

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=95.25  E-value=0.018  Score=44.15  Aligned_cols=43  Identities=16%  Similarity=0.303  Sum_probs=32.6

Q ss_pred             hhcccc--ccccEEEEEcC-CCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQG--AFGPVYKATMP-SGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g--~~g~vy~g~l~-~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|  +||.||++... +|..||||.++...  ....+.|.+|+.
T Consensus        31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~   78 (389)
T 3gni_B           31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH   78 (389)
T ss_dssp             EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHH
T ss_pred             ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHH
Confidence            589999  99999999984 68899999996432  222355666764

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=95.24  E-value=0.016  Score=43.57  Aligned_cols=43  Identities=19%  Similarity=0.364  Sum_probs=32.2

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++... ++..+|+|.+....   ....+.|..|+.
T Consensus        47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~   93 (335)
T 2owb_A           47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEIS   93 (335)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHH
Confidence            58999999999999984 57789999985432   223456777764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=95.22  E-value=0.018  Score=42.18  Aligned_cols=29  Identities=28%  Similarity=0.487  Sum_probs=25.5

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      +.||+|+||.||+|.- .+|..||||.+..
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   45 (298)
T 1csn_A           16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPR   45 (298)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEEC
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEecc
Confidence            5899999999999995 5788999999854

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=95.22  E-value=0.0095  Score=43.29  Aligned_cols=43  Identities=35%  Similarity=0.551  Sum_probs=32.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .+|..||+|.++...   ....+.|.+|++
T Consensus        17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~   63 (278)
T 3cok_A           17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVK   63 (278)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH
T ss_pred             eeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHH
Confidence            6899999999999987 578899999995421   112356777764

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=95.20  E-value=0.011  Score=49.19  Aligned_cols=28  Identities=39%  Similarity=0.737  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEec
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLA  150 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~  150 (167)
                      .+||+|+||.||++.- ..|..+|+|.++
T Consensus       195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~  223 (689)
T 3v5w_A          195 RIIGRGGFGEVYGCRKADTGKMYAMKCLD  223 (689)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEEe
Confidence            7899999999999987 568899999995

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=95.19  E-value=0.014  Score=45.16  Aligned_cols=43  Identities=19%  Similarity=0.357  Sum_probs=32.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .++..+|+|.+....   ....+.+.+|+.
T Consensus        21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~   67 (384)
T 4fr4_A           21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQ   67 (384)
T ss_dssp             EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHH
Confidence            6899999999999987 457889999985321   223456767664

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=95.18  E-value=0.017  Score=43.56  Aligned_cols=30  Identities=30%  Similarity=0.486  Sum_probs=26.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||++.. .++..||||.++..
T Consensus        30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~   60 (335)
T 3dls_A           30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKE   60 (335)
T ss_dssp             EECSSSSSCSEEEEEETTTTEEEEEEEEEST
T ss_pred             eEEEecCCEEEEEEEECCCCcEEEEEEEehh
Confidence            7899999999999985 57889999999653

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=95.18  E-value=0.0079  Score=47.20  Aligned_cols=43  Identities=30%  Similarity=0.475  Sum_probs=25.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC---CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD---SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~---~~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++.- .+|..||||.++..   .......+..|++
T Consensus       154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~  200 (446)
T 4ejn_A          154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR  200 (446)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------
T ss_pred             EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHH
Confidence            7899999999999986 56889999999542   2222345555553

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=95.18  E-value=0.02  Score=45.70  Aligned_cols=30  Identities=30%  Similarity=0.502  Sum_probs=25.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ..||+|.||.||+|.. .++..||||.++..
T Consensus        13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~   43 (483)
T 3sv0_A           13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVK   43 (483)
T ss_dssp             CCCEECSSCEEEEEEETTTCCEEEEEEEETT
T ss_pred             EEEeeCCCEEEEEEEECCCCcEEEEEEeccc
Confidence            3899999999999996 67889999988543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=95.15  E-value=0.021  Score=45.41  Aligned_cols=43  Identities=28%  Similarity=0.376  Sum_probs=29.3

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.-. .+..+|+|.+....  ......|.+|+.
T Consensus        43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~   88 (494)
T 3lij_A           43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVA   88 (494)
T ss_dssp             EEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHH
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHH
Confidence            68999999999999974 67899999995432  233466777775

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=95.13  E-value=0.02  Score=43.54  Aligned_cols=31  Identities=42%  Similarity=0.595  Sum_probs=24.8

Q ss_pred             hhccccccccEEEEEcCC------CcEEEEEEeccCC
Q 031038          123 NILGQGAFGPVYKATMPS------GGVAAIKVLASDS  153 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~------g~~vavk~l~~~~  153 (167)
                      ..||+|+||.||+|...+      +..||||.+....
T Consensus        41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~   77 (364)
T 3op5_A           41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN   77 (364)
T ss_dssp             EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC
T ss_pred             EEEecCCCeEEEEeeecCccccccccceEEEEeeccc
Confidence            589999999999998854      4689999986543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=95.12  E-value=0.025  Score=41.78  Aligned_cols=30  Identities=30%  Similarity=0.552  Sum_probs=20.4

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||++... +|..||||.+...
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   61 (318)
T 2dyl_A           31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS   61 (318)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEEEETT
T ss_pred             ceeeecCCeeEEEEEEecCCeEEEEEEeccc
Confidence            58999999999999984 6889999999654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=95.11  E-value=0.011  Score=44.72  Aligned_cols=43  Identities=26%  Similarity=0.382  Sum_probs=31.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .+|..||+|.+....   ......|.+|+.
T Consensus        15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~   61 (336)
T 3h4j_B           15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREIS   61 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHH
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHH
Confidence            5899999999999996 678899999985321   112346777764

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=95.11  E-value=0.0084  Score=44.39  Aligned_cols=30  Identities=33%  Similarity=0.593  Sum_probs=26.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      +.||+|+||.||++.. .++..||||.++..
T Consensus        37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~   67 (312)
T 2iwi_A           37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRN   67 (312)
T ss_dssp             EEEEEETTEEEEEEECTTTCCEEEEEECCST
T ss_pred             eEEEcCCCEEEEEEEEccCCeEEEEEEEecc
Confidence            6899999999999987 56789999999543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=95.11  E-value=0.018  Score=44.58  Aligned_cols=29  Identities=28%  Similarity=0.350  Sum_probs=25.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|.||.||++.. .+|..||||.++.
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~   97 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD   97 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCc
Confidence            4799999999999987 4678999999953

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=95.08  E-value=0.023  Score=44.43  Aligned_cols=39  Identities=28%  Similarity=0.235  Sum_probs=28.2

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      .+||+|+||.||.....+|..||||++....   .+.+..|+
T Consensus        21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~   59 (434)
T 2rio_A           21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEI   59 (434)
T ss_dssp             EEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHH
T ss_pred             CeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHH
Confidence            5899999999976555578999999985432   23444554

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=95.03  E-value=0.015  Score=44.18  Aligned_cols=43  Identities=30%  Similarity=0.408  Sum_probs=32.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .+|..+|+|.++...   ....+.+.+|+.
T Consensus        47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~   93 (350)
T 1rdq_E           47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR   93 (350)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH
T ss_pred             EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHH
Confidence            6899999999999997 468899999995421   223456666654

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=95.01  E-value=0.034  Score=29.09  Aligned_cols=31  Identities=16%  Similarity=0.186  Sum_probs=18.4

Q ss_pred             eehhhHHHHHHHHHHHHHHHh-hhheecccCc
Q 031038            9 IIGICVGLALGILIATLVFFG-LRWYKKHDHF   39 (167)
Q Consensus         9 ii~ii~g~~~~v~~i~~~~~~-~~~~r~~~~~   39 (167)
                      ..+|..|++.++++++++.+. |+..|+|+.+
T Consensus         9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~   40 (44)
T 2l2t_A            9 TPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK   40 (44)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             cceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence            345666777766666555555 4555665554

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=94.99  E-value=0.0085  Score=45.74  Aligned_cols=29  Identities=31%  Similarity=0.568  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++... +|..+|+|.++.
T Consensus        26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~   55 (353)
T 2i0e_A           26 MVLGKGSFGKVMLSERKGTDELYAVKILKK   55 (353)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEEEEEEEH
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            68999999999999985 477899999954

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=94.99  E-value=0.017  Score=43.30  Aligned_cols=29  Identities=38%  Similarity=0.515  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++.. .+|..+|+|.++.
T Consensus        12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   41 (318)
T 1fot_A           12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKK   41 (318)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            4899999999999987 4688999999954

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=94.98  E-value=0.025  Score=29.67  Aligned_cols=33  Identities=18%  Similarity=0.353  Sum_probs=20.7

Q ss_pred             ceeehhhHHHHHHHHHHHHHHHhh-hheecccCc
Q 031038            7 LVIIGICVGLALGILIATLVFFGL-RWYKKHDHF   39 (167)
Q Consensus         7 ~~ii~ii~g~~~~v~~i~~~~~~~-~~~r~~~~~   39 (167)
                      .-..+|.+|++.++++++++++.+ ...|+|+.+
T Consensus         8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~   41 (44)
T 2ks1_B            8 PKIPSIATGMVGALLLLLVVALGIGLFMRRRHIV   41 (44)
T ss_dssp             SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCcceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence            345677888888677665555554 555555553

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=94.97  E-value=0.026  Score=42.12  Aligned_cols=43  Identities=35%  Similarity=0.496  Sum_probs=31.9

Q ss_pred             hhccccccccEEEEEcCC------CcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS------GGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~------g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|....      +..||+|.+..... ...+.|.+|+.
T Consensus        52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~  101 (333)
T 2i1m_A           52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK  101 (333)
T ss_dssp             EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred             eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHH
Confidence            689999999999998732      24799999966432 33466777765

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=94.96  E-value=0.015  Score=42.47  Aligned_cols=43  Identities=35%  Similarity=0.547  Sum_probs=24.5

Q ss_pred             hhccccccccEEEEEcC--CCc--EEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP--SGG--VAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~--~g~--~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|...  ++.  .||||.++...   ....+.|.+|++
T Consensus        24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~   73 (291)
T 1u46_A           24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN   73 (291)
T ss_dssp             EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHH
T ss_pred             eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHH
Confidence            58999999999999862  333  58999986532   223467777765

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=94.93  E-value=0.018  Score=47.81  Aligned_cols=43  Identities=19%  Similarity=0.265  Sum_probs=33.1

Q ss_pred             hhccccccccEEEEEcC--CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP--SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~--~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++...  +|..||||.+.... ......|..|++
T Consensus        86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~  131 (681)
T 2pzi_A           86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQ  131 (681)
T ss_dssp             EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHG
T ss_pred             EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHH
Confidence            68999999999999874  67899999996533 233456777765

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=94.93  E-value=0.024  Score=42.48  Aligned_cols=43  Identities=44%  Similarity=0.659  Sum_probs=31.4

Q ss_pred             hhccccccccEEEEEc-CCCc----EEEEEEeccC-CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGG----VAAIKVLASD-SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~----~vavk~l~~~-~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|.. .++.    .|++|.+... .....++|.+|+.
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~   69 (327)
T 3lzb_A           21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY   69 (327)
T ss_dssp             EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHH
T ss_pred             EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHH
Confidence            5899999999999986 3444    3688888543 3344577888775

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=94.92  E-value=0.025  Score=42.58  Aligned_cols=30  Identities=30%  Similarity=0.468  Sum_probs=25.7

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~  152 (167)
                      .+||+|+||.||++... +|..||||.+...
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~   65 (336)
T 3fhr_A           35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDS   65 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESS
T ss_pred             eeeeeCCCeEEEEEEECCCCCEEEEEEecCc
Confidence            36999999999999884 6889999999543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=94.91  E-value=0.017  Score=47.94  Aligned_cols=29  Identities=31%  Similarity=0.568  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++... ++..||||.++.
T Consensus       347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~  376 (674)
T 3pfq_A          347 MVLGKGSFGKVMLSERKGTDELYAVKILKK  376 (674)
T ss_dssp             EESSBTTTBCEEEEEESSSCCEEEEEEEEH
T ss_pred             EEEccCCCEEEEEEEECCCCcEEEEEEEec
Confidence            68999999999999984 577899999953

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=94.88  E-value=0.02  Score=45.63  Aligned_cols=43  Identities=26%  Similarity=0.428  Sum_probs=32.3

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|... +|..||||.++...   ......+.+|+.
T Consensus        22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~   68 (476)
T 2y94_A           22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQ   68 (476)
T ss_dssp             EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHH
Confidence            58999999999999874 78999999995421   122356777764

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=94.86  E-value=0.03  Score=44.64  Aligned_cols=29  Identities=34%  Similarity=0.473  Sum_probs=23.4

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++... ++..+|+|.+..
T Consensus        42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   71 (504)
T 3q5i_A           42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKK   71 (504)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEC
T ss_pred             eEecccCCeEEEEEEECCCCcEEEEEEEEh
Confidence            68999999999999974 578999999954

>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1

Probab=94.86  E-value=0.0051  Score=30.53  Aligned_cols=23  Identities=22%  Similarity=0.325  Sum_probs=9.0

Q ss_pred             ehhhHHHHHHHHHHHHHHHhhhh
Q 031038           10 IGICVGLALGILIATLVFFGLRW   32 (167)
Q Consensus        10 i~ii~g~~~~v~~i~~~~~~~~~   32 (167)
                      ++.++|+++++++.+.+.++++|
T Consensus        11 aagVvglll~vii~l~~~~~iRR   33 (35)
T 1iij_A           11 IATVVGVLLFLILVVVVGILIKR   33 (35)
T ss_dssp             HHHHHHHHHHHHHTTTTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhheEEee
Confidence            34445533333333333344443

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=94.84  E-value=0.017  Score=47.28  Aligned_cols=43  Identities=30%  Similarity=0.498  Sum_probs=31.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .+|..+|+|.+....   ......+..|+.
T Consensus       190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~  236 (576)
T 2acx_A          190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ  236 (576)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHH
Confidence            6899999999999988 468899999995421   223445666654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=94.82  E-value=0.018  Score=46.71  Aligned_cols=43  Identities=30%  Similarity=0.546  Sum_probs=31.6

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.. .+|..+|+|.++...   ......+..|++
T Consensus       191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~  237 (543)
T 3c4z_A          191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK  237 (543)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHH
Confidence            5699999999999998 468899999995421   123355666654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=94.76  E-value=0.018  Score=41.87  Aligned_cols=43  Identities=37%  Similarity=0.468  Sum_probs=31.0

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... ++..||+|.+....   ......|.+|++
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~   61 (279)
T 3fdn_A           15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE   61 (279)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHH
T ss_pred             eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHH
Confidence            58999999999999874 56789999984321   112345666664

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=94.73  E-value=0.021  Score=44.98  Aligned_cols=43  Identities=23%  Similarity=0.407  Sum_probs=30.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++.- .+|..+|+|.+....  ....+.|.+|++
T Consensus        17 ~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~   62 (444)
T 3soa_A           17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREAR   62 (444)
T ss_dssp             EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHH
T ss_pred             EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHH
Confidence            6899999999999975 578899999996533  223356777765

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=94.69  E-value=0.025  Score=43.51  Aligned_cols=29  Identities=34%  Similarity=0.542  Sum_probs=25.5

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++... ++..+|+|.++.
T Consensus        44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~   73 (373)
T 2r5t_A           44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQK   73 (373)
T ss_dssp             EEEECCTTCEEEEEEETTTCCEEEEEEEEG
T ss_pred             EEEeeCCCeEEEEEEEcCCCCEEEEEEEEH
Confidence            69999999999999984 578899999954

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=94.65  E-value=0.024  Score=42.25  Aligned_cols=43  Identities=33%  Similarity=0.600  Sum_probs=29.4

Q ss_pred             hhccccccccEEEEEcC-CCcE--EEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGV--AAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~--vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... +|..  +++|.++... ....+.|..|++
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~   77 (327)
T 1fvr_A           31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE   77 (327)
T ss_dssp             EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHH
T ss_pred             eeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHH
Confidence            68999999999999884 4554  4999986532 333456777764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=94.63  E-value=0.032  Score=42.20  Aligned_cols=30  Identities=13%  Similarity=0.269  Sum_probs=26.2

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~  152 (167)
                      ..||+|.||.||++... +|..+|+|.++..
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~   58 (342)
T 2qr7_A           28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKS   58 (342)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETT
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEcc
Confidence            78999999999999874 6789999999654

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=94.61  E-value=0.033  Score=46.08  Aligned_cols=43  Identities=26%  Similarity=0.334  Sum_probs=32.3

Q ss_pred             hhccccccccEEEEEcCC----CcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMPS----GGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~----g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|....    +..||+|.++... ....+.|.+|+.
T Consensus       396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~  443 (656)
T 2j0j_A          396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL  443 (656)
T ss_dssp             EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHH
T ss_pred             eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHH
Confidence            689999999999999832    4579999986543 233467888775

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=94.60  E-value=0.023  Score=41.42  Aligned_cols=43  Identities=33%  Similarity=0.475  Sum_probs=31.6

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCC---cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDS---HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~---~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||++... ++..||+|.+....   ......|.+|++
T Consensus        20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~   66 (284)
T 2vgo_A           20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE   66 (284)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHH
T ss_pred             heecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHH
Confidence            68999999999999884 57789999985321   122356777764

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=94.58  E-value=0.023  Score=43.14  Aligned_cols=29  Identities=38%  Similarity=0.697  Sum_probs=25.5

Q ss_pred             hhccccccccEEEEEc----CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM----PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l----~~g~~vavk~l~~  151 (167)
                      +.||+|+||.||++..    .+|..||||.++.
T Consensus        60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~   92 (355)
T 1vzo_A           60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKK   92 (355)
T ss_dssp             EEEEETTTEEEEEEEECSSTTTTCEEEEEEESE
T ss_pred             EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeH
Confidence            6899999999999987    4688999999854

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=94.54  E-value=0.034  Score=40.89  Aligned_cols=29  Identities=28%  Similarity=0.350  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ++||+|+||.||++.. .++..||+|.++.
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   53 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD   53 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecc
Confidence            4799999999999987 5688999999954

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=94.51  E-value=0.03  Score=40.79  Aligned_cols=29  Identities=34%  Similarity=0.583  Sum_probs=25.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++.- .++..||||.+..
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   44 (296)
T 4hgt_A           15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECV   44 (296)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEC
T ss_pred             eeecCCCCeEEEEEEEcCCCceEEEEeecc
Confidence            6899999999999985 5788999998744

>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}

Probab=94.48  E-value=0.052  Score=30.77  Aligned_cols=26  Identities=23%  Similarity=0.290  Sum_probs=11.2

Q ss_pred             hhHHHHH-HHHHHHHHHH-hhhheeccc
Q 031038           12 ICVGLAL-GILIATLVFF-GLRWYKKHD   37 (167)
Q Consensus        12 ii~g~~~-~v~~i~~~~~-~~~~~r~~~   37 (167)
                      |++|.++ +++++.+.+| |.+++++++
T Consensus        12 ivlGg~~~lll~~glcI~ccvkcrhRrr   39 (70)
T 2klu_A           12 IVLGGVAGLLLFIGLGIFFSVRSRHRRR   39 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSCCSS
T ss_pred             HHHhHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            4445444 3344444444 443333333

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=94.43  E-value=0.028  Score=43.31  Aligned_cols=29  Identities=31%  Similarity=0.628  Sum_probs=25.5

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++...++..+|+|++..
T Consensus        46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~   74 (394)
T 4e7w_A           46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQ   74 (394)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEEEC
T ss_pred             EEEeeCCCeEEEEEEECCCCeEEEEEEec
Confidence            58999999999999997777799998854

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=94.37  E-value=0.017  Score=43.12  Aligned_cols=29  Identities=38%  Similarity=0.643  Sum_probs=23.1

Q ss_pred             hhccccccccEEEEEcC-CCcE----EEEEEecc
Q 031038          123 NILGQGAFGPVYKATMP-SGGV----AAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~----vavk~l~~  151 (167)
                      ..||+|+||.||+|... ++..    |++|.+..
T Consensus        19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~   52 (325)
T 3kex_A           19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED   52 (325)
T ss_dssp             EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECC
T ss_pred             eeeeecCCceEEEEEEcCCCceEEEEEEEEeccc
Confidence            58999999999999873 4443    88888854

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=94.35  E-value=0.03  Score=41.68  Aligned_cols=29  Identities=34%  Similarity=0.552  Sum_probs=25.5

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||+|.. .++..||||.++.
T Consensus        49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~   78 (320)
T 3a99_A           49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEK   78 (320)
T ss_dssp             EECSSSSSCEEEEEEETTTTEEEEEEEEEG
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEec
Confidence            6899999999999986 5788999999954

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=94.27  E-value=0.032  Score=41.34  Aligned_cols=30  Identities=43%  Similarity=0.623  Sum_probs=26.0

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCC
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS  153 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~  153 (167)
                      +.||+|+||.||++... +..||+|.+....
T Consensus        14 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~   43 (307)
T 2eva_A           14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESES   43 (307)
T ss_dssp             EEEECCSSSEEEEEEET-TEEEEEEECSSTT
T ss_pred             eEeecCCCceEEEEEEC-CeeEEEEEecChh
Confidence            58999999999999984 6889999996543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=93.57  E-value=0.047  Score=42.79  Aligned_cols=30  Identities=27%  Similarity=0.402  Sum_probs=23.4

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~  152 (167)
                      ++||+|+||.||.....+|..||||++...
T Consensus        30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~   59 (432)
T 3p23_A           30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPE   59 (432)
T ss_dssp             EEEEECGGGCEEEEEESSSSEEEEEEECTT
T ss_pred             CeeecCcCEEEEEEEEeCCeEEEEEEECHH
Confidence            689999999955444447899999999654

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=93.52  E-value=0.08  Score=27.65  Aligned_cols=33  Identities=12%  Similarity=0.129  Sum_probs=26.3

Q ss_pred             eehhhHHHHHHHHHHHHHHHhhhheecccCccc
Q 031038            9 IIGICVGLALGILIATLVFFGLRWYKKHDHFRR   41 (167)
Q Consensus         9 ii~ii~g~~~~v~~i~~~~~~~~~~r~~~~~~~   41 (167)
                      -+..+++.++++++++++.+.+..+-|||+..+
T Consensus        10 ~~~~Ia~~vVGvll~vi~~l~~~~~~RRR~~~~   42 (44)
T 2jwa_A           10 PLTSIISAVVGILLVVVLGVVFGILIKRRQQKI   42 (44)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCC
T ss_pred             cccchHHHHHHHHHHHHHHHHHHhheehhhhhc
Confidence            356688889998888888888889999988753

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=93.44  E-value=0.019  Score=47.81  Aligned_cols=44  Identities=27%  Similarity=0.408  Sum_probs=34.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC-CcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD-SHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~-~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.. .+|..||||.+... .....+.|..|+++
T Consensus        20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~i   65 (676)
T 3qa8_A           20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQI   65 (676)
T ss_dssp             CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHH
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHH
Confidence            5899999999999987 46889999998653 23334668777753

>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*

Probab=93.01  E-value=0.018  Score=49.44  Aligned_cols=27  Identities=11%  Similarity=0.004  Sum_probs=0.0

Q ss_pred             cCCcceeehhhHHHHHHHHHHHHHHHh
Q 031038            3 HKSDLVIIGICVGLALGILIATLVFFG   29 (167)
Q Consensus         3 ~~s~~~ii~ii~g~~~~v~~i~~~~~~   29 (167)
                      +++.+++++|+++++++++++++++++
T Consensus       701 ~l~~~aii~il~~~~~ll~~~ll~~~~  727 (880)
T 1q55_A          701 GFDLPIILVILGSVLALLILFLLLLLF  727 (880)
T ss_dssp             ---------------------------
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            456677778777766654444333333

>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=93.00  E-value=0.081  Score=31.46  Aligned_cols=24  Identities=17%  Similarity=0.148  Sum_probs=13.1

Q ss_pred             eehhhHHHHHHHHHHHHHHHhhhh
Q 031038            9 IIGICVGLALGILIATLVFFGLRW   32 (167)
Q Consensus         9 ii~ii~g~~~~v~~i~~~~~~~~~   32 (167)
                      +++|++|++++++++.++++++++
T Consensus        10 ~~~Iv~gvi~gilliGllllliwk   33 (79)
T 2knc_B           10 ILVVLLSVMGAILLIGLAALLIWK   33 (79)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHH
Confidence            455566666666555554444443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=92.81  E-value=0.16  Score=41.03  Aligned_cols=28  Identities=18%  Similarity=0.204  Sum_probs=18.4

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      ++||+|.||.||++.. .+..+++|....
T Consensus       342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~  369 (540)
T 3en9_A          342 HLIGKGAEADIKRDSY-LDFDVIIKERVK  369 (540)
T ss_dssp             ------CCEEEEEEEC-SSCEEEEEEECC
T ss_pred             CEEeeCCCEEEEEEEE-CCCeEEEEEEec
Confidence            5899999999999977 567899998743

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=92.73  E-value=0.037  Score=40.89  Aligned_cols=27  Identities=30%  Similarity=0.669  Sum_probs=23.2

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~  151 (167)
                      ..||+|+||.||+|...+  .+|+|.++.
T Consensus        39 ~~lg~G~~g~V~~~~~~~--~~avk~~~~   65 (319)
T 2y4i_B           39 ELIGKGRFGQVYHGRWHG--EVAIRLIDI   65 (319)
T ss_dssp             CBCCCSSSSEEEEEEESS--SEEEEECCC
T ss_pred             eEeccCCceEEEEEEEcC--eEEEEEeec
Confidence            589999999999999854  599999854

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=92.30  E-value=0.076  Score=39.95  Aligned_cols=30  Identities=27%  Similarity=0.434  Sum_probs=19.7

Q ss_pred             hhccccccccEEEEEcC----CCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATMP----SGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~----~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||++...    .+..+|+|.+...
T Consensus        43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~   76 (345)
T 2v62_A           43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQE   76 (345)
T ss_dssp             EEC------CEEEEEESSSCGGGCCEEEEEEECC
T ss_pred             eeEeecCCeEEEEEEecCCCCccceEEEEeeecC
Confidence            58999999999999985    5678999998654

>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}

Probab=91.12  E-value=0.14  Score=24.98  Aligned_cols=26  Identities=15%  Similarity=0.213  Sum_probs=16.1

Q ss_pred             eehhhHHHHHHHHHHHHHHHhhhhee
Q 031038            9 IIGICVGLALGILIATLVFFGLRWYK   34 (167)
Q Consensus         9 ii~ii~g~~~~v~~i~~~~~~~~~~r   34 (167)
                      .+.+++|.+++++++..-+++|+-||
T Consensus         9 alt~i~gl~vif~~lg~tflywrgrr   34 (40)
T 2l9u_A            9 ALTVIAGLVVIFMMLGGTFLYWRGRR   34 (40)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCceeEEEcccc
Confidence            34556676666666666666776554

>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A

Probab=90.61  E-value=0.26  Score=24.73  Aligned_cols=26  Identities=23%  Similarity=0.180  Sum_probs=16.2

Q ss_pred             CCcceeehhhHHHHHHHHHHHHHHHh
Q 031038            4 KSDLVIIGICVGLALGILIATLVFFG   29 (167)
Q Consensus         4 ~s~~~ii~ii~g~~~~v~~i~~~~~~   29 (167)
                      ++...++.|+.++.++++..++++-+
T Consensus         7 fs~p~i~lII~~vmaGiIG~IllI~y   32 (40)
T 1afo_A            7 FSEPEITLIIFGVMAGVIGTILLISY   32 (40)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            45556777888877777655444333

>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*

Probab=89.97  E-value=0.12  Score=29.88  Aligned_cols=8  Identities=38%  Similarity=0.630  Sum_probs=3.1

Q ss_pred             hhhHHHHH
Q 031038           11 GICVGLAL   18 (167)
Q Consensus        11 ~ii~g~~~   18 (167)
                      |+++++++
T Consensus        23 GLifA~vL   30 (74)
T 2zxe_G           23 GLIVAAVL   30 (74)
T ss_dssp             HHHHHHHH
T ss_pred             cchhHHHH
Confidence            34433333

>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A

Probab=88.50  E-value=0.43  Score=24.77  Aligned_cols=21  Identities=19%  Similarity=0.205  Sum_probs=10.2

Q ss_pred             eehhhHHHHHHHHHHHHHHHh
Q 031038            9 IIGICVGLALGILIATLVFFG   29 (167)
Q Consensus         9 ii~ii~g~~~~v~~i~~~~~~   29 (167)
                      +.+|+.|++.+++++.+++++
T Consensus         9 ~~~Iv~gvi~~ivliGl~lLl   29 (43)
T 2k9j_B            9 ILVVLLSVMGAILLIGLAALL   29 (43)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeehHHHHHHHHHHHHHHHHH
Confidence            345555555555544443333

>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A

Probab=87.45  E-value=0.11  Score=26.82  Aligned_cols=28  Identities=21%  Similarity=0.256  Sum_probs=17.2

Q ss_pred             CcceeehhhHHHHHHHHHHHHHHHhhhh
Q 031038            5 SDLVIIGICVGLALGILIATLVFFGLRW   32 (167)
Q Consensus         5 s~~~ii~ii~g~~~~v~~i~~~~~~~~~   32 (167)
                      +.+.++++.++.+++..++++.++..+|
T Consensus        15 srga~iGL~v~gVai~~vIVvsl~mlRr   42 (43)
T 2llm_A           15 NKGAIIGLMVGGVVIATVIVITLVMLKK   42 (43)
Confidence            4566777776666655555555555543

>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}

Probab=87.11  E-value=0.53  Score=26.69  Aligned_cols=13  Identities=31%  Similarity=0.135  Sum_probs=5.6

Q ss_pred             ehhhHHHHHHHHH
Q 031038           10 IGICVGLALGILI   22 (167)
Q Consensus        10 i~ii~g~~~~v~~   22 (167)
                      .|++++++++++-
T Consensus        20 gGLifA~vLfi~G   32 (67)
T 2jp3_A           20 GGLIFGGLLCIAG   32 (67)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHH
Confidence            3444444443333

>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=87.10  E-value=1.5  Score=23.89  Aligned_cols=24  Identities=17%  Similarity=0.105  Sum_probs=11.2

Q ss_pred             CcceeehhhHHHHHHHHHHHHHHH
Q 031038            5 SDLVIIGICVGLALGILIATLVFF   28 (167)
Q Consensus         5 s~~~ii~ii~g~~~~v~~i~~~~~   28 (167)
                      ..|+++..++|.++++.++.+++.
T Consensus        11 p~wiIi~svl~GLllL~li~~~Lw   34 (54)
T 2knc_A           11 PIWWVLVGVLGGLLLLTILVLAMW   34 (54)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHH
Confidence            345555555555554444444433

>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}

Probab=86.47  E-value=0.46  Score=26.94  Aligned_cols=18  Identities=22%  Similarity=0.084  Sum_probs=8.7

Q ss_pred             hHHHHHHHHHHHHHHHhh
Q 031038           13 CVGLALGILIATLVFFGL   30 (167)
Q Consensus        13 i~g~~~~v~~i~~~~~~~   30 (167)
                      +.|.+++++++++.++++
T Consensus        19 igGLifA~vLfi~GI~ii   36 (67)
T 2jp3_A           19 LGGLIFGGLLCIAGIALA   36 (67)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             ecchhhHHHHHHHHHHHH
Confidence            345555555544444443

>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}

Probab=85.94  E-value=0.85  Score=20.95  Aligned_cols=26  Identities=15%  Similarity=0.312  Sum_probs=16.4

Q ss_pred             eeehhhHHHHHHHHHHHHHHHhhhhe
Q 031038            8 VIIGICVGLALGILIATLVFFGLRWY   33 (167)
Q Consensus         8 ~ii~ii~g~~~~v~~i~~~~~~~~~~   33 (167)
                      .|.-++.|.++++.++++.+.++...
T Consensus         4 tiweviaglvalltflafgfwlfkyl   29 (32)
T 2lx0_A            4 TIWEVIAGLVALLTFLAFGFWLFKYL   29 (32)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34566777777666666666665443

>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}

Probab=85.29  E-value=0.7  Score=26.67  Aligned_cols=16  Identities=6%  Similarity=0.179  Sum_probs=8.1

Q ss_pred             HHHHHHHhhhheeccc
Q 031038           22 IATLVFFGLRWYKKHD   37 (167)
Q Consensus        22 ~i~~~~~~~~~~r~~~   37 (167)
                      +-++++-|||..|-+|
T Consensus        27 lg~li~gcwcylrlqr   42 (90)
T 1zza_A           27 LGALILGCWCYLRLQR   42 (90)
T ss_dssp             HHHHHHHHHTTTSSCS
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3344555666555443

>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}

Probab=83.96  E-value=0.95  Score=25.88  Aligned_cols=19  Identities=26%  Similarity=0.158  Sum_probs=8.7

Q ss_pred             ehhhHHHHHHHHHHHHHHH
Q 031038           10 IGICVGLALGILIATLVFF   28 (167)
Q Consensus        10 i~ii~g~~~~v~~i~~~~~   28 (167)
                      .|++++++++++-+++++-
T Consensus        19 GGLifA~vLfi~GI~iilS   37 (72)
T 2jo1_A           19 GGLVIAGILFILGILIVLS   37 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHc
Confidence            4555555554444443333

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=83.38  E-value=1.4  Score=32.00  Aligned_cols=42  Identities=19%  Similarity=0.263  Sum_probs=30.7

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      ..+|.|..+.||+-++.||+.+.||.-..........|..|.
T Consensus        21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea   62 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEA   62 (288)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHH
T ss_pred             EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHH
Confidence            467999999999999999999999987544333233455554

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=82.67  E-value=1.9  Score=21.60  Aligned_cols=33  Identities=21%  Similarity=0.266  Sum_probs=21.5

Q ss_pred             CcceeehhhHHHHHHHHHH-HHHHHhhhheeccc
Q 031038            5 SDLVIIGICVGLALGILIA-TLVFFGLRWYKKHD   37 (167)
Q Consensus         5 s~~~ii~ii~g~~~~v~~i-~~~~~~~~~~r~~~   37 (167)
                      +..+--+.+.|+++++++. +++..+.++..|||
T Consensus         5 ~~~ls~GaIAGiVvG~v~gv~li~~l~~~~~rrr   38 (38)
T 2k1k_A            5 SRGLTGGEIVAVIFGLLLGAALLLGILVFRSRRA   38 (38)
T ss_dssp             STTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CCCCCCCceeeeehHHHHHHHHHHHHHHHHeecC
Confidence            4556778888988877665 44555555555553

>2l35_A DAP12-NKG2C_TM; immunoreceptor, transmembrane assembly, DAP12-NKG2C complex; NMR {Homo sapiens}

Probab=82.54  E-value=1.3  Score=24.76  Aligned_cols=30  Identities=27%  Similarity=0.253  Sum_probs=22.9

Q ss_pred             cCCcceeehhhHHHHHHHHHHHHHHHhhhh
Q 031038            3 HKSDLVIIGICVGLALGILIATLVFFGLRW   32 (167)
Q Consensus         3 ~~s~~~ii~ii~g~~~~v~~i~~~~~~~~~   32 (167)
                      ++..+.++|++++-++..+++++...||-+
T Consensus         3 ELd~~tvaGIIv~DIi~TllLal~VY~~A~   32 (63)
T 2l35_A            3 TVSPGVLAGIVVGDLVLTVLIALAVYFLGR   32 (63)
T ss_dssp             SSCCSHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             eccchheehhHHHHHHHHHHHHHHHHhhcc
Confidence            567788899999988877777777766653

>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=82.23  E-value=0.5  Score=27.97  Aligned_cols=18  Identities=28%  Similarity=0.215  Sum_probs=8.5

Q ss_pred             ccee-ehhhHHHHHHHHHH
Q 031038            6 DLVI-IGICVGLALGILIA   23 (167)
Q Consensus         6 ~~~i-i~ii~g~~~~v~~i   23 (167)
                      .+.| +|+++|++++.+++
T Consensus        10 ~~~Iv~gvi~gilliGlll   28 (79)
T 2knc_B           10 ILVVLLSVMGAILLIGLAA   28 (79)
T ss_dssp             SHHHHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHH
Confidence            3444 56555555433333

>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}

Probab=81.35  E-value=3.3  Score=22.47  Aligned_cols=18  Identities=22%  Similarity=0.300  Sum_probs=8.7

Q ss_pred             ehhhHHHHHHHHHHHHHH
Q 031038           10 IGICVGLALGILIATLVF   27 (167)
Q Consensus        10 i~ii~g~~~~v~~i~~~~   27 (167)
                      ..|+++++.+++++++++
T Consensus        10 WiIi~svl~GLLLL~Lii   27 (54)
T 2l8s_A           10 WVILLSAFAGLLLLMLLI   27 (54)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            344555555555444333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	167
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-11
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	8e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-09
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	7e-09
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-08
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-07
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-07
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-07
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-07
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-06
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-06
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-06
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-06
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-06
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-06
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-06
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-06
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-06
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-06
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-06
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-06
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-06
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-06
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-06
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	8e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-05
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-05
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-05
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-05
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-05
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-05
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	8e-05
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	8e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-04
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-04
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-04
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-04
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-04
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-04
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-04
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-04
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	0.001

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.6 bits (141), Expect = 2e-11
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 16/78 (20%)

Query: 106 IPRYAYKDIQKATQNFT-----------NILGQGAFGPVYKATMPSGG----VAAIKVLA 150
           I  + ++D  +A + F             ++G G FG V    +   G      AIK L 
Sbjct: 4   IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK 63

Query: 151 SD-SHQGEKEFQTEVRAH 167
           S  + +  ++F +E    
Sbjct: 64  SGYTEKQRRDFLSEASIM 81

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 5e-10
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 101 PSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEF 160
           P   G+ + A+ +I + +      LGQG FG V+  T       AIK L        + F
Sbjct: 2   PQTQGLAKDAW-EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAF 59

Query: 161 QTEVRA 166
             E + 
Sbjct: 60  LQEAQV 65

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 8e-10
 Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 120 NFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRAH 167
            F   +G G FG V+     +    AIK +  +    E++F  E    
Sbjct: 8   TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVM 54

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 1e-09
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 9/61 (14%)

Query: 106 IPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR 165
           +PR   K +++        LG G FG V+          A+K L          F  E  
Sbjct: 10  VPRETLKLVER--------LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEAN 60

Query: 166 A 166
            
Sbjct: 61  L 61

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 1/48 (2%)

Query: 120 NFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRAH 167
            F   LG G FG V           AIK++  +    E EF  E +  
Sbjct: 7   TFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVM 53

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 7e-09
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 5/53 (9%)

Query: 120 NFTNILGQGAFGPVYKATMPSGG----VAAIKVLASDSHQGE-KEFQTEVRAH 167
           +F  ++G+G FG VY  T+          A+K L   +  GE  +F TE    
Sbjct: 30  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 82

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 3e-08
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 9/65 (13%)

Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGG---VAAIKVLASD-SHQGEKEFQT 162
           P   + DI+     F +++G+G FG V KA +   G    AAIK +    S    ++F  
Sbjct: 5   PVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG 59

Query: 163 EVRAH 167
           E+   
Sbjct: 60  ELEVL 64

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.3 bits (117), Expect = 3e-08
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVR 165
           P Y   ++++      + LG G +G VY+       +  A+K L  D+ + E EF  E  
Sbjct: 7   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 65

Query: 166 AH 167
             
Sbjct: 66  VM 67

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 3e-07
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 6/50 (12%)

Query: 123 NILGQGAFGPVYKATMPSGG-----VAAIKVLASDSHQGE-KEFQTEVRA 166
            ++G G FG VYK  + +         AIK L +   + +  +F  E   
Sbjct: 13  KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 4e-07
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 114 IQKATQNFT--NILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVRA 166
           ++    +F   + LG G  G V+K +  PSG V A K++  +       +   E++ 
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 4e-07
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 111 YKDIQKATQ-----NFTNILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKEFQTEV 164
           Y+ + +             LG GAFG VYKA       +AA KV+ + S +  +++  E+
Sbjct: 1   YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 60

Query: 165 RAH 167
              
Sbjct: 61  DIL 63

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 5e-07
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 15/69 (21%)

Query: 106 IPRYAYKDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGEKE 159
            PR            F   LG GAFG V +AT        +    A+K+L   +H  E+E
Sbjct: 20  FPRNRLS--------FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 71

Query: 160 -FQTEVRAH 167
              +E++  
Sbjct: 72  ALMSELKVL 80

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 45.1 bits (106), Expect = 9e-07
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVRAH 167
           LG GAFG V++     +G V   K + +     +   + E+   
Sbjct: 37  LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIM 80

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 1e-06
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 7/61 (11%)

Query: 114 IQKATQ-NFTNILGQGAFGPVYKAT-MPSGGVAAIKVL-----ASDSHQGEKEFQTEVRA 166
           I K T+     +LG GAFG VYK   +P G    I V       + S +  KE   E   
Sbjct: 5   ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 64

Query: 167 H 167
            
Sbjct: 65  M 65

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.8 bits (105), Expect = 1e-06
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 7/67 (10%)

Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMP------SGGVAAIKVLASDSHQG-EKE 159
           P+    +  +    +   +G+GAFG V++A  P         + A+K+L  ++    + +
Sbjct: 3   PKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD 62

Query: 160 FQTEVRA 166
           FQ E   
Sbjct: 63  FQREAAL 69

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 1e-06
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 9/64 (14%)

Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTE 163
           G P+  Y   +K        +GQGA G VY A  + +G   AI+ +       ++    E
Sbjct: 16  GDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67

Query: 164 VRAH 167
           +   
Sbjct: 68  ILVM 71

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 44.3 bits (104), Expect = 2e-06
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 124 ILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVRAH 167
            LG GAFG V++ T   +G   A K + +     ++  + E++  
Sbjct: 33  ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTM 77

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 7/63 (11%)

Query: 112 KDIQKATQNFTNI---LGQGAFGPVYKATMPSGG---VAAIKVLASDSHQGE-KEFQTEV 164
           K +     N       LG G FG V +            AIKVL   + + + +E   E 
Sbjct: 1   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60

Query: 165 RAH 167
           +  
Sbjct: 61  QIM 63

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.8 bits (103), Expect = 2e-06
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 12/65 (18%)

Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGE---KEFQT 162
           P   + D+++        +G G+FG VY A  + +  V AIK ++    Q     ++   
Sbjct: 13  PEKLFSDLRE--------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64

Query: 163 EVRAH 167
           EVR  
Sbjct: 65  EVRFL 69

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 3e-06
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)

Query: 121 FTNILGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVRAH 167
               +G G+FG VYK         A+K+L   + + Q  + F+ EV   
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVL 58

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 43.7 bits (102), Expect = 3e-06
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 123 NILGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVRAH 167
             +G+G +G VYKA    G   A+K +    +          E+   
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISIL 54

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 3e-06
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 3/50 (6%)

Query: 121 FTNILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGEKEFQTEVRAH 167
           F   +G+G+F  VYK       V  A   L     +    + F+ E    
Sbjct: 13  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEML 62

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 4e-06
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGE-KEFQTEVRAH 167
           + +G+GA+G V  A    +    AIK ++   HQ   +    E++  
Sbjct: 14  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 60

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 4e-06
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 3/47 (6%)

Query: 121 FTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRAH 167
               +G+G FG V       G   A+K + +D+    + F  E    
Sbjct: 11  LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVM 54

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 5e-06
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 121 FTNILGQGAFGPVYKAT------MPSGGVAAIKVL-ASDSHQGEKEFQTEVRAH 167
            +  LGQG+FG VY+               AIK +  + S +   EF  E    
Sbjct: 24  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 77

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 5e-06
 Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 5/50 (10%)

Query: 123 NILGQGAFGPVYKATMPSGGVA---AIKVLASDSHQGE--KEFQTEVRAH 167
             LG G FG V K       V    A+K+L ++++      E   E    
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 62

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.7 bits (100), Expect = 6e-06
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 120 NFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVRAH 167
           +F ++LG GAF  V  A    +  + AIK +A  + +G E   + E+   
Sbjct: 12  DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 6e-06
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 102 SASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKEF 160
           +    P       Q+ +   T ++G G+FG VY+A +   G + AIK +  D     +E 
Sbjct: 5   TVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL 64

Query: 161 QT 162
           Q 
Sbjct: 65  QI 66

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 6e-06
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 18/78 (23%)

Query: 108 RYAYKDIQKATQN-----------FTNILGQGAFGPVYKATMPSGG------VAAIKVLA 150
            Y Y D ++   +           F  +LG GAFG V  AT             A+K+L 
Sbjct: 17  EYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK 76

Query: 151 SDSHQGEKE-FQTEVRAH 167
             +   E+E   +E++  
Sbjct: 77  EKADSSEREALMSELKMM 94

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.4 bits (99), Expect = 8e-06
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 6/52 (11%)

Query: 120 NFT--NILGQGAFGPVYKATMPSGG-VAAIKVL---ASDSHQGEKEFQTEVR 165
           +F+   I+G+G FG VY       G + A+K L        QGE     E  
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI 56

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 8e-06
 Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 9/68 (13%)

Query: 109 YAYKDIQKATQNFTN------ILGQGAFGPVYKAT-MPSGGVAAIKVL--ASDSHQGEKE 159
           +  +++ K              +G GA+G V  A    +G   AIK L     S    K 
Sbjct: 4   FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63

Query: 160 FQTEVRAH 167
              E+R  
Sbjct: 64  AYRELRLL 71

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 1e-05
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 15/69 (21%)

Query: 106 IPRYAYKDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGE-K 158
            PR   K            LG+GAFG V +A         +    A+K+L   +   E +
Sbjct: 10  FPRDRLK--------LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 61

Query: 159 EFQTEVRAH 167
              +E++  
Sbjct: 62  ALMSELKIL 70

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 17/71 (23%)

Query: 106 IPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPS--------GGVAAIKVLASDSHQGE 157
           +PR                LG+GAFG V  A                A+K+L SD+ + +
Sbjct: 10  LPRDRLV--------LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 61

Query: 158 -KEFQTEVRAH 167
             +  +E+   
Sbjct: 62  LSDLISEMEMM 72

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 41.3 bits (96), Expect = 2e-05
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 121 FTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGE---KEFQTEVRAH 167
              ILG G    V+ A  +      A+KVL +D  +       F+ E +  
Sbjct: 11  LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA 61

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 2e-05
 Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 13/67 (19%)

Query: 106 IPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVLASDSHQGEKE-F 160
           I R   +            +G+G FG V++    S        AIK   + +    +E F
Sbjct: 4   IQRERIE--------LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 55

Query: 161 QTEVRAH 167
             E    
Sbjct: 56  LQEALTM 62

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVL--ASDSHQGEKEFQTEVRAH 167
             +G+G +G VYKA    +G V A+K +   +++         E+   
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRAH 167
           +G+G FG V++     G   A+K+ +S   +     + E+   
Sbjct: 11  IGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQT 51

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 3e-05
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 123 NILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKE-----FQTEVRAH 167
           + LG+G F  VYKA   +   + AIK +        K+        E++  
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLL 54

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 121 FTNILGQGAFGPVYKAT-MPSGGVAAIKVL-ASDSHQGEKEFQTEVRAH 167
               LG+GA+G V  A    +    A+K++    +    +  + E+  +
Sbjct: 9   LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 57

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 3e-05
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 121 FTNILGQGAFGPVYKATMPSGG-VAAIKVL---ASDSHQGEKEFQTEVRAH 167
               LG+G FG VY A       + A+KVL     +    E + + EV   
Sbjct: 10  IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 60

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 3e-05
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 9/70 (12%)

Query: 107 PRYAYKDIQKATQNFTN------ILGQGAFGPVYKAT-MPSGGVAAIKVL--ASDSHQGE 157
           P +  +++ K              +G GA+G V  A    +G   A+K L     S    
Sbjct: 2   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61

Query: 158 KEFQTEVRAH 167
           K    E+R  
Sbjct: 62  KRTYRELRLL 71

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 7/54 (12%)

Query: 121 FTNILGQGAFGPVYKATMPS----GGVAAIKVLASD---SHQGEKEFQTEVRAH 167
               LG G+FG V +    +        A+K L  D     +   +F  EV A 
Sbjct: 12  LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 39.8 bits (92), Expect = 6e-05
 Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 3/42 (7%)

Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVR 165
           +G+G+FG +++ T + +    AIK           + + E R
Sbjct: 13  IGEGSFGVIFEGTNLLNNQQVAIKFE--PRRSDAPQLRDEYR 52

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 6e-05
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 3/51 (5%)

Query: 120 NFTNILGQGAFGPVYKATMPSGG-VAAIKVL--ASDSHQGEKEFQTEVRAH 167
                +G G++G   K    S G +   K L   S +   ++   +EV   
Sbjct: 7   EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL 57

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (91), Expect = 6e-05
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVL--ASDSHQGEKEFQTEVRAH 167
             +G+G +G V+KA    +  + A+K +    D          E+   
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLL 55

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 6e-05
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 124 ILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVRA 166
           +LG G  G V +     +    A+K+L  D  +  +E +   RA
Sbjct: 19  VLGLGINGKVLQIFNKRTQEKFALKML-QDCPKARREVELHWRA 61

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 7e-05
 Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 1/44 (2%)

Query: 124 ILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVRA 166
           +LG G FG VY    +      AIK +  D      E     R 
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 54

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.4 bits (91), Expect = 8e-05
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVRAH 167
           +G G+FG +Y  T + +G   AIK+    +     +   E + +
Sbjct: 15  IGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIY 56

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 8e-05
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 121 FTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVR 165
              +LG+G+FG V+ A    +    AIK L  D    + + +  + 
Sbjct: 6   LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMV 51

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 39.1 bits (90), Expect = 1e-04
 Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 12/66 (18%)

Query: 111 YKDIQKATQNFTNI--------LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ 161
           Y D +     + N         LG+G +  V++A  + +     +K+L       +K+ +
Sbjct: 21  YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIK 77

Query: 162 TEVRAH 167
            E++  
Sbjct: 78  REIKIL 83

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 1e-04
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 121 FTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKE---FQTEVRAH 167
           +  +LG+G FG V       +G   A+K+L  +    + E     TE R  
Sbjct: 9   YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 1e-04
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG--EKEFQTEVRAH 167
             +GQG FG V+KA    +G   A+K +  ++ +         E++  
Sbjct: 16  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL 63

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 125 LGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKEFQTEVRAH 167
           LG+G FG V++    S       K +       +   + E+   
Sbjct: 13  LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISIL 55

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 4/51 (7%)

Query: 121 FTNILGQGAFGPVYKAT-MPSGGVAAIKVL---ASDSHQGEKEFQTEVRAH 167
               LG G+FG V+      +G   A+KVL        +  +    E    
Sbjct: 8   ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 58

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (89), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 124 ILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVR 165
            LG G+FG V       SG   A+K+L        K+ +  + 
Sbjct: 48  TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 38.2 bits (88), Expect = 2e-04
 Identities = 7/55 (12%), Positives = 13/55 (23%), Gaps = 10/55 (18%)

Query: 123 NILGQGAFGPVYKATMPSGGVAAIKVLASDS----------HQGEKEFQTEVRAH 167
            ++G+G    V+       G   +K                  G+  F       
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 14/68 (20%), Positives = 20/68 (29%), Gaps = 11/68 (16%)

Query: 111 YKDIQKATQNFT--------NILGQGAFGPVYKAT-MPSGGVAAIKVL--ASDSHQGEKE 159
           +  ++     FT          +G GA G V  A         AIK L     +    K 
Sbjct: 3   FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62

Query: 160 FQTEVRAH 167
              E+   
Sbjct: 63  AYRELVLM 70

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.5 bits (88), Expect = 2e-04
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVR 165
           LG G F  V+ A  M +    A+K++  D     +  + E++
Sbjct: 21  LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIK 61

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 6/59 (10%)

Query: 115 QKATQNFT--NILGQGAFGPVYKAT-MPSGGVAAIKVLASD---SHQGEKEFQTEVRAH 167
           +K  ++F    ILG+G+F  V  A  + +    AIK+L                E    
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 62

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 4e-04
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 6/58 (10%)

Query: 114 IQKATQNFT--NILGQGAFGPVYKAT--MPSGGVAAIKVL--ASDSHQGEKEFQTEVR 165
           + +A Q +     +G+GA+G V+KA      G   A+K +   +           EV 
Sbjct: 2   LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 59

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 5e-04
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%)

Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVL------ASDSHQGEKEFQTEVRAH 167
           LG G F  V K     +G   A K +      +S      ++ + EV   
Sbjct: 18  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 5e-04
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 8/53 (15%)

Query: 123 NILGQGAFGPVYKA----TMPSGGVAAIKVL----ASDSHQGEKEFQTEVRAH 167
            +LG GA+G V+         +G + A+KVL         +  +  +TE +  
Sbjct: 30  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 35.8 bits (82), Expect = 0.001
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 10/55 (18%)

Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVL---------ASDSHQGEKEFQTEVRAH 167
            ILG+G    V +    P+    A+K++         A +  +  +    EV   
Sbjct: 9   EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	167
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.15
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	98.05
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	98.01
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	97.96
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	97.96
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	97.88
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	97.8
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	97.77
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	97.67
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	97.65
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	97.63
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	97.6
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	97.59
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	97.58
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	97.57
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	97.54
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	97.53
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	97.46
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	97.43
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	97.42
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	97.42
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	97.41
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	97.39
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	97.36
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	97.35
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	97.3
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	97.26
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	97.25
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	97.23
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	97.23
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	97.21
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	97.21
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	97.15
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	97.14
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	97.11
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	96.99
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	96.98
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	96.96
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	96.94
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	96.92
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	96.91
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	96.84
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	96.82
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	96.54
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	96.38

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=8.8e-07  Score=63.92  Aligned_cols=43  Identities=26%  Similarity=0.373  Sum_probs=35.9

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||+|.+.++..||||.++.. ....++|.+|+++
T Consensus        19 ~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~   61 (272)
T d1qpca_          19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANL   61 (272)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHH
T ss_pred             EEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHH
Confidence            589999999999999988889999999654 3345789998864

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.05  E-value=1.3e-06  Score=63.84  Aligned_cols=59  Identities=27%  Similarity=0.555  Sum_probs=42.8

Q ss_pred             ccCHHHHHHHhhhhh-----------hhccccccccEEEEEcC-CC---cEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          108 RYAYKDIQKATQNFT-----------NILGQGAFGPVYKATMP-SG---GVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       108 ~~~~~~l~~~~~~f~-----------~~lg~g~~g~vy~g~l~-~g---~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      .++++++..++.+|.           ++||+|+||.||+|... ++   ..||||.+.... ....++|.+|+++
T Consensus         6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   80 (299)
T d1jpaa_           6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI   80 (299)
T ss_dssp             GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHH
Confidence            456677777777764           47999999999999984 22   258999986543 3445789999864

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.7e-06  Score=63.65  Aligned_cols=47  Identities=30%  Similarity=0.419  Sum_probs=34.9

Q ss_pred             hhhhhccccccccEEEEEcCCC----cEEEEEEeccC-CcccHHHHHHHHhh
Q 031038          120 NFTNILGQGAFGPVYKATMPSG----GVAAIKVLASD-SHQGEKEFQTEVRA  166 (167)
Q Consensus       120 ~f~~~lg~g~~g~vy~g~l~~g----~~vavk~l~~~-~~~~~~~F~~e~~~  166 (167)
                      +|.++||+|+||.||+|.+.+.    ..||||+++.. .....++|.+|+++
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~   81 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII   81 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHH
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHH
Confidence            3456899999999999998442    25899999753 33445789999863

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.96  E-value=1.2e-06  Score=64.11  Aligned_cols=44  Identities=32%  Similarity=0.558  Sum_probs=34.4

Q ss_pred             hhccccccccEEEEEcC------CCcEEEEEEeccCCcc-cHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP------SGGVAAIKVLASDSHQ-GEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~~~-~~~~F~~e~~~  166 (167)
                      +.||+|+||.||+|.+.      ++..||||+++..... ..++|.+|+++
T Consensus        19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~i   69 (301)
T d1lufa_          19 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL   69 (301)
T ss_dssp             EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             EEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHH
Confidence            78999999999999873      4568999999764333 35679998864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=3.4e-06  Score=61.22  Aligned_cols=44  Identities=32%  Similarity=0.431  Sum_probs=36.3

Q ss_pred             hhhccccccccEEEEEcCCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          122 TNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      .+.||+|+||.||+|...++..||||.++.. ....++|.+|+..
T Consensus        22 ~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~   65 (285)
T d1fmka3          22 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQV   65 (285)
T ss_dssp             EEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHH
T ss_pred             eeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHH
Confidence            3689999999999999988889999999654 3345789888753

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=5.4e-06  Score=60.13  Aligned_cols=43  Identities=30%  Similarity=0.454  Sum_probs=35.0

Q ss_pred             hhccccccccEEEEEcC-CCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||+|... +|..||||.++.. ....++|.+|+.+
T Consensus        23 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~i   66 (287)
T d1opja_          23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAV   66 (287)
T ss_dssp             EETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHH
T ss_pred             eEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHH
Confidence            68999999999999984 5788999999654 3346789988864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=6.9e-06  Score=59.35  Aligned_cols=44  Identities=30%  Similarity=0.510  Sum_probs=33.0

Q ss_pred             hhccccccccEEEEEcCCC-----cEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPSG-----GVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g-----~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      ++||+|+||.||+|.+.+.     ..||||+++... .....+|.+|+++
T Consensus        13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~i   62 (283)
T d1mqba_          13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI   62 (283)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHH
Confidence            4899999999999998532     369999996543 3334679888864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1.1e-05  Score=58.46  Aligned_cols=43  Identities=30%  Similarity=0.377  Sum_probs=33.1

Q ss_pred             hccccccccEEEEEcC---CCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          124 ILGQGAFGPVYKATMP---SGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~---~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      .||+|+||.||+|.+.   ++..||||.++... ....++|.+|+++
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~i   62 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI   62 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHH
Confidence            4999999999999873   34579999997543 3345789998864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.6e-05  Score=57.71  Aligned_cols=44  Identities=36%  Similarity=0.570  Sum_probs=36.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.. .+|..||||.++.......+.|.+|+++
T Consensus        18 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~i   62 (288)
T d2jfla1          18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI   62 (288)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHH
T ss_pred             EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHH
Confidence            5799999999999987 5688999999976555556788888754

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=2.7e-05  Score=56.55  Aligned_cols=44  Identities=27%  Similarity=0.397  Sum_probs=35.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||++.- .+|..||||.++.......+.|.+|+++
T Consensus        26 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~i   70 (293)
T d1yhwa1          26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV   70 (293)
T ss_dssp             EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHH
T ss_pred             EEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHH
Confidence            4799999999999986 5789999999965444455678888754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.7e-05  Score=57.14  Aligned_cols=43  Identities=28%  Similarity=0.388  Sum_probs=31.5

Q ss_pred             hccccccccEEEEEcCC---CcEEEEEEeccCC--cccHHHHHHHHhh
Q 031038          124 ILGQGAFGPVYKATMPS---GGVAAIKVLASDS--HQGEKEFQTEVRA  166 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l~~---g~~vavk~l~~~~--~~~~~~F~~e~~~  166 (167)
                      .||+|+||.||+|.+.+   +..||||.++...  ....++|.+|+++
T Consensus        14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~i   61 (277)
T d1xbba_          14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV   61 (277)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHH
T ss_pred             CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHH
Confidence            79999999999999843   3579999996532  2234679998864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=2.7e-05  Score=57.06  Aligned_cols=44  Identities=41%  Similarity=0.570  Sum_probs=31.7

Q ss_pred             hhccccccccEEEEEcC-CCc----EEEEEEecc-CCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP-SGG----VAAIKVLAS-DSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~-~g~----~vavk~l~~-~~~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||+|... +|.    .||+|+++. ......++|.+|+++
T Consensus        15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   64 (317)
T d1xkka_          15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV   64 (317)
T ss_dssp             EEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHH
T ss_pred             eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHH
Confidence            59999999999999873 443    589999965 334456789999864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=2.4e-05  Score=56.28  Aligned_cols=42  Identities=33%  Similarity=0.546  Sum_probs=32.9

Q ss_pred             hhccccccccEEEEEcCCCcEEEEEEeccC--CcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMPSGGVAAIKVLASD--SHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~~g~~vavk~l~~~--~~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||+|.+.+  .||||.++..  .....++|.+|+++
T Consensus        14 ~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~   57 (276)
T d1uwha_          14 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGV   57 (276)
T ss_dssp             SEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHH
T ss_pred             EEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHH
Confidence            489999999999999853  5999999643  23445789988864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=1.4e-05  Score=58.34  Aligned_cols=44  Identities=32%  Similarity=0.462  Sum_probs=33.5

Q ss_pred             hhccccccccEEEEEcC------CCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATMP------SGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.+.      .+..||||+++... ......|.+|+++
T Consensus        26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~i   76 (308)
T d1p4oa_          26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV   76 (308)
T ss_dssp             EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHH
Confidence            58999999999999873      35689999996533 3334568888864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=2.9e-05  Score=55.67  Aligned_cols=44  Identities=23%  Similarity=0.305  Sum_probs=34.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC--CcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD--SHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~--~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.. .++..||+|.+...  .....+.|.+|+++
T Consensus        15 ~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~i   61 (270)
T d1t4ha_          15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEM   61 (270)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHH
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHH
Confidence            4799999999999987 46789999999543  23345678888864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=2.9e-05  Score=56.72  Aligned_cols=45  Identities=33%  Similarity=0.571  Sum_probs=33.8

Q ss_pred             hhhhccccccccEEEEEc------CCCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          121 FTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       121 f~~~lg~g~~g~vy~g~l------~~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      +.+.||+|+||.||+|++      ..+..||||+++.... ....+|.+|+.
T Consensus        27 l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~   78 (311)
T d1t46a_          27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK   78 (311)
T ss_dssp             EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred             EeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHH
Confidence            346899999999999986      3456899999976443 33457888764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=1.8e-05  Score=57.87  Aligned_cols=45  Identities=33%  Similarity=0.572  Sum_probs=31.3

Q ss_pred             hhhccccccccEEEEEcCC-Cc--EEEEEEeccC-CcccHHHHHHHHhh
Q 031038          122 TNILGQGAFGPVYKATMPS-GG--VAAIKVLASD-SHQGEKEFQTEVRA  166 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l~~-g~--~vavk~l~~~-~~~~~~~F~~e~~~  166 (167)
                      .+.||+|+||.||+|...+ |.  .||||+++.. .....++|.+|+++
T Consensus        15 ~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   63 (309)
T d1fvra_          15 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV   63 (309)
T ss_dssp             EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHH
T ss_pred             EEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHH
Confidence            3689999999999999843 33  4789998543 33345678888863

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=5.3e-05  Score=55.24  Aligned_cols=43  Identities=28%  Similarity=0.412  Sum_probs=32.0

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC--CcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD--SHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~--~~~~~~~F~~e~~  165 (167)
                      +.||+|.||.||+|.- .+|+.||||.+...  .......+.+|+.
T Consensus        16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~   61 (318)
T d3blha1          16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK   61 (318)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHH
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHH
Confidence            5899999999999996 57899999998442  2233466777765

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.43  E-value=6.1e-05  Score=55.02  Aligned_cols=44  Identities=34%  Similarity=0.467  Sum_probs=33.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcc---cHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQ---GEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~---~~~~F~~e~~~  166 (167)
                      +.||+|+||.||+|.- .+|..||||.++.....   ..++|.+|+++
T Consensus        21 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~i   68 (309)
T d1u5ra_          21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF   68 (309)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHH
Confidence            6799999999999985 57889999999654322   23568888764

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=7e-05  Score=55.37  Aligned_cols=44  Identities=23%  Similarity=0.240  Sum_probs=31.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.- .+|..||||.++... ....+.|.+|+++
T Consensus        14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~i   59 (345)
T d1pmea_          14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKI   59 (345)
T ss_dssp             EECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             EEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHH
Confidence            4899999999999975 678999999996543 2334678888754

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=97.42  E-value=5.1e-05  Score=56.45  Aligned_cols=44  Identities=27%  Similarity=0.444  Sum_probs=35.3

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.- .+|..||||.+........+.|.+|+.+
T Consensus        32 ~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~i   76 (350)
T d1koaa2          32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT   76 (350)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHH
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHH
Confidence            6899999999999986 5788999999966544445678888753

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=8.1e-05  Score=54.55  Aligned_cols=43  Identities=30%  Similarity=0.382  Sum_probs=34.2

Q ss_pred             hccccccccEEEEEc-CCCcEEEEEEeccCC-cccHHHHHHHHhh
Q 031038          124 ILGQGAFGPVYKATM-PSGGVAAIKVLASDS-HQGEKEFQTEVRA  166 (167)
Q Consensus       124 ~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~-~~~~~~F~~e~~~  166 (167)
                      .||+|+||.||+|.. .+|..||+|.++... ....+.|.+|+.+
T Consensus        13 ~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~i   57 (322)
T d1s9ja_          13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV   57 (322)
T ss_dssp             EEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGG
T ss_pred             EEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHH
Confidence            899999999999986 578899999996533 3334678888754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=9.9e-05  Score=53.28  Aligned_cols=44  Identities=25%  Similarity=0.316  Sum_probs=33.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC------cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS------HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~------~~~~~~F~~e~~~  166 (167)
                      +.||+|+||.||++.- .+|..||||.++...      ....+.|.+|+.+
T Consensus        16 ~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~i   66 (293)
T d1jksa_          16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI   66 (293)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHH
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHH
Confidence            6899999999999997 578999999985321      1124678888753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=7.8e-05  Score=54.96  Aligned_cols=44  Identities=30%  Similarity=0.306  Sum_probs=33.7

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.- .+|+.||||.++...  ....+.+.+|+++
T Consensus        24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~i   70 (348)
T d2gfsa1          24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL   70 (348)
T ss_dssp             EECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHH
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHH
Confidence            5899999999999984 678999999996432  2234567777753

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=97.35  E-value=7.2e-05  Score=55.64  Aligned_cols=44  Identities=25%  Similarity=0.372  Sum_probs=35.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.- .+|..||||.++.........|.+|+++
T Consensus        35 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~i   79 (352)
T d1koba_          35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISI   79 (352)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHH
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHH
Confidence            6899999999999986 5789999999976544445678888754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.30  E-value=0.00013  Score=52.05  Aligned_cols=44  Identities=30%  Similarity=0.258  Sum_probs=33.7

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCc---ccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSH---QGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~---~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.- .+|+.||||.++....   .....|.+|+++
T Consensus        13 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~   60 (277)
T d1o6ya_          13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQN   60 (277)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHH
Confidence            3899999999999985 5789999999965332   223568888753

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=97.26  E-value=0.00014  Score=53.09  Aligned_cols=40  Identities=23%  Similarity=0.483  Sum_probs=31.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~~  165 (167)
                      ..||+|+||.||+|+- .+|..||||.++...   .+++.+|+.
T Consensus        41 ~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~   81 (328)
T d3bqca1          41 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIK   81 (328)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHH
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHH
Confidence            6899999999999986 578899999996542   445666664

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00012  Score=53.88  Aligned_cols=44  Identities=32%  Similarity=0.335  Sum_probs=27.4

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.- .+|..||||.++...  ....+.+.+|+++
T Consensus        24 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~i   70 (346)
T d1cm8a_          24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRL   70 (346)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHH
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHH
Confidence            5899999999999985 568999999996432  2234567777753

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=7.4e-05  Score=53.55  Aligned_cols=44  Identities=39%  Similarity=0.616  Sum_probs=25.7

Q ss_pred             hhccccccccEEEEEc--CCCc--EEEEEEeccCC---cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM--PSGG--VAAIKVLASDS---HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l--~~g~--~vavk~l~~~~---~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||+|.+  +++.  .||||.++...   ....++|.+|+++
T Consensus        14 ~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~   64 (273)
T d1u46a_          14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA   64 (273)
T ss_dssp             EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHH
T ss_pred             EEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHH
Confidence            5899999999999987  2333  68999996432   2234689888863

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.23  E-value=0.00011  Score=53.63  Aligned_cols=43  Identities=30%  Similarity=0.462  Sum_probs=28.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||++.- .+|..||||.+.... ......|.+|++
T Consensus        15 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~   59 (307)
T d1a06a_          15 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA   59 (307)
T ss_dssp             EESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHH
T ss_pred             EEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHH
Confidence            6899999999999987 468899999995432 223355667764

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00013  Score=52.06  Aligned_cols=45  Identities=24%  Similarity=0.304  Sum_probs=33.1

Q ss_pred             hhhccccccccEEEEEcCC----CcEEEEEEeccCCc-ccHHHHHHHHhh
Q 031038          122 TNILGQGAFGPVYKATMPS----GGVAAIKVLASDSH-QGEKEFQTEVRA  166 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l~~----g~~vavk~l~~~~~-~~~~~F~~e~~~  166 (167)
                      .+.||+|+||.||+|....    +..||||.++.... ...+.|.+|+++
T Consensus        12 ~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~   61 (273)
T d1mp8a_          12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALT   61 (273)
T ss_dssp             EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHH
T ss_pred             EEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHH
Confidence            3489999999999998742    34689999965433 334678888753

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.21  E-value=0.00013  Score=53.79  Aligned_cols=41  Identities=24%  Similarity=0.327  Sum_probs=30.8

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCCcccHHHHHHHH
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEV  164 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~~~~~~~F~~e~  164 (167)
                      ..||+|+||.||+|+- .+|+.||||.++... ...+.+.+|+
T Consensus        19 ~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei   60 (362)
T d1q8ya_          19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEI   60 (362)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHH
Confidence            4899999999999986 678999999996542 2234455554

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00019  Score=53.10  Aligned_cols=43  Identities=28%  Similarity=0.182  Sum_probs=30.9

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC--cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS--HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~--~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|.- .+|..||||+++...  ......+.+|+.
T Consensus        23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~   68 (355)
T d2b1pa1          23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV   68 (355)
T ss_dssp             EECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred             EEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHH
Confidence            5899999999999986 468999999996432  223356777765

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00013  Score=52.76  Aligned_cols=43  Identities=30%  Similarity=0.524  Sum_probs=29.2

Q ss_pred             hhccccccccEEEEEcC------CCcEEEEEEeccCC-cccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP------SGGVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~------~g~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|...      .++.||||.++... ....++|..|..
T Consensus        19 ~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~   68 (299)
T d1ywna1          19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK   68 (299)
T ss_dssp             EEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHH
T ss_pred             eEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHH
Confidence            68999999999999862      34579999996533 333456666553

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.11  E-value=0.00018  Score=51.87  Aligned_cols=30  Identities=33%  Similarity=0.569  Sum_probs=25.7

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ..||+|+||.||+|.. .+|..||||.+...
T Consensus        13 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~   43 (299)
T d1ckia_          13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVK   43 (299)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEESC
T ss_pred             EEEeeCCCcEEEEEEECCCCCEEEEEEEchh
Confidence            3899999999999986 56889999998553

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00022  Score=51.46  Aligned_cols=44  Identities=27%  Similarity=0.321  Sum_probs=33.5

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC---cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS---HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~---~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.- .+|..||||.++...   ....+.|.+|+++
T Consensus        14 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~i   61 (288)
T d1uu3a_          14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV   61 (288)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHH
Confidence            5899999999999987 568899999985321   2234668888753

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.0002  Score=51.73  Aligned_cols=43  Identities=33%  Similarity=0.438  Sum_probs=26.3

Q ss_pred             hhccccccccEEEEEcC--------CCcEEEEEEeccCCc-ccHHHHHHHHh
Q 031038          123 NILGQGAFGPVYKATMP--------SGGVAAIKVLASDSH-QGEKEFQTEVR  165 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l~--------~g~~vavk~l~~~~~-~~~~~F~~e~~  165 (167)
                      +.||+|+||.||+|+..        ++..||||+++.... ....+|.+|..
T Consensus        19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~   70 (299)
T d1fgka_          19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME   70 (299)
T ss_dssp             EECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHH
Confidence            58999999999999862        234799999966443 33466776653

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00019  Score=51.05  Aligned_cols=32  Identities=28%  Similarity=0.580  Sum_probs=27.1

Q ss_pred             hhhhccccccccEEEEEcCCCcEEEEEEeccCC
Q 031038          121 FTNILGQGAFGPVYKATMPSGGVAAIKVLASDS  153 (167)
Q Consensus       121 f~~~lg~g~~g~vy~g~l~~g~~vavk~l~~~~  153 (167)
                      |.+.||+|+||.||+|.+ .|..||||.++...
T Consensus        11 ~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~   42 (262)
T d1byga_          11 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA   42 (262)
T ss_dssp             EEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC
T ss_pred             EeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH
Confidence            445899999999999999 56899999996644

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00028  Score=52.07  Aligned_cols=30  Identities=43%  Similarity=0.823  Sum_probs=26.1

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccC
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASD  152 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~  152 (167)
                      ++||+|+||.||++.. .+|..||||.++..
T Consensus        26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~   56 (350)
T d1q5ka_          26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD   56 (350)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECC
T ss_pred             eEEeeCcCeEEEEEEECCCCCEEEEEEECcc
Confidence            4899999999999997 46899999999654

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00026  Score=50.36  Aligned_cols=44  Identities=36%  Similarity=0.451  Sum_probs=33.1

Q ss_pred             hhhccccccccEEEEEc-CCCcEEEEEEeccC---CcccHHHHHHHHh
Q 031038          122 TNILGQGAFGPVYKATM-PSGGVAAIKVLASD---SHQGEKEFQTEVR  165 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~---~~~~~~~F~~e~~  165 (167)
                      .+.||+|+||.||++.- .+|..||+|.+...   .....+.|.+|+.
T Consensus        11 ~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~   58 (263)
T d2j4za1          11 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE   58 (263)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH
T ss_pred             EEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHH
Confidence            34899999999999988 46889999998532   1223466777775

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00032  Score=51.33  Aligned_cols=44  Identities=30%  Similarity=0.439  Sum_probs=30.0

Q ss_pred             hhhccccccccEEEEEcCCC------cEEEEEEeccCC-cccHHHHHHHHh
Q 031038          122 TNILGQGAFGPVYKATMPSG------GVAAIKVLASDS-HQGEKEFQTEVR  165 (167)
Q Consensus       122 ~~~lg~g~~g~vy~g~l~~g------~~vavk~l~~~~-~~~~~~F~~e~~  165 (167)
                      ...||+|+||.||+|+....      ..||||.+.... ......|.+|+.
T Consensus        42 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~   92 (325)
T d1rjba_          42 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK   92 (325)
T ss_dssp             EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHH
T ss_pred             eeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHH
Confidence            36899999999999987321      269999995532 333467777764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00032  Score=50.54  Aligned_cols=29  Identities=34%  Similarity=0.590  Sum_probs=23.9

Q ss_pred             hhccccccccEEEEEc-C-CCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-P-SGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~-~g~~vavk~l~~  151 (167)
                      ..||+|+||.||++.- . ++..||||.++.
T Consensus        13 ~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~   43 (305)
T d1blxa_          13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRV   43 (305)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEEEE
T ss_pred             EEEecccCeEEEEEEEECCCCEEEEEEEEeh
Confidence            3899999999999985 3 466799999853

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.82  E-value=0.00034  Score=51.82  Aligned_cols=44  Identities=30%  Similarity=0.393  Sum_probs=33.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEeccCC---cccHHHHHHHHhh
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLASDS---HQGEKEFQTEVRA  166 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~~~---~~~~~~F~~e~~~  166 (167)
                      ..||+|+||.||++.- .+|..||||.++...   ....+.|.+|+.+
T Consensus        47 ~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~i   94 (350)
T d1rdqe_          47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI   94 (350)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             EEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHH
Confidence            6899999999999987 578999999985321   2234567777653

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.0011  Score=48.69  Aligned_cols=29  Identities=28%  Similarity=0.350  Sum_probs=25.2

Q ss_pred             hhccccccccEEEEEc-CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM-PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l-~~g~~vavk~l~~  151 (167)
                      .+||+|+||.||++.- .+|..||||.++.
T Consensus        18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~   47 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNKRTQEKFALKMLQD   47 (335)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEC
T ss_pred             EEeeeccCeEEEEEEECCCCCEEEEEEECC
Confidence            3699999999999986 6789999999954

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00043  Score=50.60  Aligned_cols=29  Identities=38%  Similarity=0.697  Sum_probs=24.5

Q ss_pred             hhccccccccEEEEEc----CCCcEEEEEEecc
Q 031038          123 NILGQGAFGPVYKATM----PSGGVAAIKVLAS  151 (167)
Q Consensus       123 ~~lg~g~~g~vy~g~l----~~g~~vavk~l~~  151 (167)
                      +.||+|+||.||++.-    ..|+.||||.++.
T Consensus        30 ~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~   62 (322)
T d1vzoa_          30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKK   62 (322)
T ss_dssp             EEEEETTTEEEEEEEECSSTTTTCEEEEEEESE
T ss_pred             EEEecCCCeEEEEEEECccCCCCcEEEEEEEeh
Confidence            6899999999999975    2478999999853