Citrus Sinensis ID: 031064

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDnraaaasnwsdggggaessprtsaasgddwRSAFdaaangpvslrsysrsasnghsrrysdpaengdvrsgsnsgsrrtpnrvpppppptqsgskyf
Flexible Loop (DISEMBL)
MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELlqedqnvkrrrDRYQKQSELLSKLTRQLSIHDNRAaaasnwsdggggAESSPRTSAASGDDWRSAFDAAangpvslrsysrsasnghsrrysdpaengdvrsgsnsgsrrtpnrvpppppptqsgskyf
Low Complexity Region (SEG)
MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVppppppTQSGSKYF
Disordered region (IsUnstruct)
*****VVLCQV***********************************************************************************************************************************************************
Disordered Region (DISOPRED)
*VEQAVVLCQVEKAKEDMLNQLYSS*****************************SELLSKLTRQLSIHDNRAAAA*******************************************************************************************
Disordered Region (DISEMBL)
MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRA************************DDWRSAFDAAANGPVSLR****************************************************
Disordered Region (DISPRO)
MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRAAA********************************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARxxxxxxxxxxxxxxxxxxxxxSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	166	2.2.26 [Sep-21-2011]
Q9LQ55	920	Dynamin-2B OS=Arabidopsis	yes	no	0.951	0.171	0.716	4e-55
Q9SE83	914	Dynamin-2A OS=Arabidopsis	no	no	0.969	0.176	0.704	9e-52
Q39828	610	Dynamin-related protein 5	no	no	0.337	0.091	0.339	0.0003
Q84XF3	610	Dynamin-related protein 1	no	no	0.337	0.091	0.321	0.0007
Q8LF21	614	Dynamin-related protein 1	no	no	0.325	0.087	0.388	0.0008

>sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2

 Score =  213 bits (543), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 119/166 (71%), Positives = 134/166 (80%), Gaps = 8/166 (4%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +AVVLCQVEK+KEDMLNQLYSS+ A    RIE L+QEDQNVKRRRDRYQKQS LLSKL
Sbjct: 759 VPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIESLIQEDQNVKRRRDRYQKQSSLLSKL 818

Query: 62  TRQLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRSAFDAAANGPVSLRSYSRSA 120
           TRQLSIHDNRAAAAS+WSD  G  ESSPRT+  +SG+DW +AF+AAA+GP SL+ Y    
Sbjct: 819 TRQLSIHDNRAAAASSWSDNSG-TESSPRTNGGSSGEDWMNAFNAAASGPDSLKRY---G 874

Query: 121 SNGHSRRYSDPAENGDVRSGSNSGSRRT-PNRVPPPPPPTQSGSKY 165
           S GHSRRYSDPA+NG+  SGS   SRRT PNR+PP PP  QSGS Y
Sbjct: 875 SGGHSRRYSDPAQNGEDSSGSGGSSRRTTPNRLPPAPP--QSGSSY 918

Putative microtubule-associated force-producing protein, able to bind and hydrolyze GTP.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 5EC: .EC: 5

>sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2

 Score =  202 bits (513), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 117/166 (70%), Positives = 131/166 (78%), Gaps = 5/166 (3%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +AVVLCQVEKAKEDMLNQLYSS+ A    RIE L+QEDQNVKRRR+RYQKQS LLSKL
Sbjct: 752 VPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQEDQNVKRRRERYQKQSSLLSKL 811

Query: 62  TRQLSIHDNRAAAASNWSDGGGGAESSPRTS-AASGDDWRSAFDAAANGPVSLRSYSRSA 120
           TRQLSIHDNRAAAAS++SD   G ESSPR S  +SGDDW +AF++AANGP    S S+  
Sbjct: 812 TRQLSIHDNRAAAASSYSD-NSGTESSPRASGGSSGDDWMNAFNSAANGPSD--SLSKYG 868

Query: 121 SNGHSRRYSDPAENGDVRS-GSNSGSRRTPNRVPPPPPPTQSGSKY 165
           S GHSRRYSDPA+NGD  S GS S  R TPNR+PP PPPT S  +Y
Sbjct: 869 SGGHSRRYSDPAQNGDAASPGSGSNRRTTPNRLPPAPPPTGSAYRY 914

Microtubule-associated force-producing protein involved in clathrin-mediated vesicle trafficking from the trans-Golgi network to the central vacuole. Able to bind and hydrolyze GTP. Binds specifically to phosphatidylinositol 3-phosphate (PtdIns3P).

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A OS=Glycine max PE=2 SV=1

 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSEL 57
           + +++V CQV +AK  +L+  ++ +G   T R+  LL ED  +  RR    K+ EL
Sbjct: 540 IPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSALAKRLEL 595

Microtubule-associated force-producing protein.

Glycine max (taxid: 3847)

>sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1

 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 36/56 (64%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSEL 57
           + +++V CQV +AK  +L+  ++ +G +  +++ +LL ED  V++RR    K+ EL
Sbjct: 540 IPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQRRTSIAKRLEL 595

Putative microtubule-associated force-producing protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2

 Score = 43.1 bits (100), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 31/54 (57%)

Query: 4   QAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSEL 57
           +AVV CQV +AK  +LN  Y+ VG +   ++  +L ED  +  RR    K+ EL
Sbjct: 547 KAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLMERRGTLAKRLEL 600

Microtubule-associated force-producing protein that is targeted to the growing edges of the cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance during pollen maturation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
225460010	931	PREDICTED: dynamin-2B [Vitis vinifera] g	0.993	0.177	0.778	9e-60
147841234	938	hypothetical protein VITISV_043157 [Viti	0.993	0.175	0.778	1e-59
225465253	920	PREDICTED: dynamin-2B [Vitis vinifera] g	0.969	0.175	0.783	2e-59
224127734	920	predicted protein [Populus trichocarpa]	0.945	0.170	0.766	8e-58
6625788	930	dynamin homolog [Astragalus sinicus]	0.969	0.173	0.771	2e-56
51477379	921	DRP [Cucumis melo]	0.933	0.168	0.733	9e-55
357470181	922	Dynamin-2B [Medicago truncatula] gi|3555	0.957	0.172	0.792	1e-54
224120026	917	predicted protein [Populus trichocarpa]	0.843	0.152	0.756	3e-54
224129484	915	predicted protein [Populus trichocarpa]	0.867	0.157	0.772	4e-54
449447543	928	PREDICTED: dynamin-2B-like [Cucumis sati	0.957	0.171	0.757	2e-53

>gi|225460010|ref|XP_002271285.1| PREDICTED: dynamin-2B [Vitis vinifera] gi|297734796|emb|CBI17030.3| unnamed protein product [Vitis vinifera]

 Score =  234 bits (597), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 130/167 (77%), Positives = 138/167 (82%), Gaps = 2/167 (1%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +AVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELL EDQNVKRRR+RYQKQS LLSKL
Sbjct: 765 VPKAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLLEDQNVKRRRERYQKQSSLLSKL 824

Query: 62  TRQLSIHDNRAAAASNWSDGGGGAESSPRTSAAS-GDDWRSAFDAAANGPVSLRS-YSRS 119
           TRQLSIHDNRA AAS+WS+G GGAESSP+TS  S GDDWRSAFDAAANGPV   S  SRS
Sbjct: 825 TRQLSIHDNRATAASSWSNGVGGAESSPKTSGPSGGDDWRSAFDAAANGPVDYNSDLSRS 884

Query: 120 ASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF 166
            SNGHSR YSDPA+NGDV SGSNS  R    R P PPP   SG K+F
Sbjct: 885 GSNGHSRHYSDPAQNGDVSSGSNSSRRTPNRRPPAPPPSGSSGYKFF 931

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147841234|emb|CAN68973.1| hypothetical protein VITISV_043157 [Vitis vinifera]

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/167 (77%), Positives = 138/167 (82%), Gaps = 2/167 (1%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +AVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELL EDQNVKRRR+RYQKQS LLSKL
Sbjct: 772 VPKAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLLEDQNVKRRRERYQKQSSLLSKL 831

Query: 62  TRQLSIHDNRAAAASNWSDGGGGAESSPRTSAAS-GDDWRSAFDAAANGPVSLRS-YSRS 119
           TRQLSIHDNRA AAS+WS+G GGAESSP+TS  S GDDWRSAFDAAANGPV   S  SRS
Sbjct: 832 TRQLSIHDNRATAASSWSNGVGGAESSPKTSGPSGGDDWRSAFDAAANGPVDYNSDLSRS 891

Query: 120 ASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF 166
            SNGHSR YSDPA+NGDV SGSNS  R    R P PPP   SG K+F
Sbjct: 892 GSNGHSRHYSDPAQNGDVSSGSNSSRRTPNRRPPAPPPSGSSGYKFF 938

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465253|ref|XP_002268311.1| PREDICTED: dynamin-2B [Vitis vinifera] gi|297739464|emb|CBI29646.3| unnamed protein product [Vitis vinifera]

 Score =  233 bits (593), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/166 (78%), Positives = 142/166 (85%), Gaps = 5/166 (3%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +AVVLCQVEK+KEDMLNQLYSSV AQSTARIEELLQEDQNVKRRR+R QKQS LL+KL
Sbjct: 756 VPKAVVLCQVEKSKEDMLNQLYSSVSAQSTARIEELLQEDQNVKRRRERNQKQSSLLAKL 815

Query: 62  TRQLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRSAFDAAANGPV-SLRSYSRS 119
           T+QLSIHDNRAAAAS+ S   GGAESSPRT   +SGDDWRSAFDAAANGP  S  + SRS
Sbjct: 816 TKQLSIHDNRAAAASS-SWSNGGAESSPRTPGPSSGDDWRSAFDAAANGPTDSYSNSSRS 874

Query: 120 ASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKY 165
            +NGHSRRYSDP++NGD  SG NSGSRRTPNR+PP PP  QSGS Y
Sbjct: 875 GANGHSRRYSDPSQNGDANSGPNSGSRRTPNRLPPAPP--QSGSSY 918

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127734|ref|XP_002329164.1| predicted protein [Populus trichocarpa] gi|222870945|gb|EEF08076.1| predicted protein [Populus trichocarpa]

 Score =  228 bits (580), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 128/167 (76%), Positives = 138/167 (82%), Gaps = 10/167 (5%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +AVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELLQEDQNVKRRR+RYQKQS LLSKL
Sbjct: 754 VPKAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLQEDQNVKRRRERYQKQSSLLSKL 813

Query: 62  TRQLSIHDNRAAAASNWSDGGGGAES---SPRTSAASGDDWRSAFDAAANGPVSLRSYSR 118
           TRQLSIHDNRAAAAS+    G GAES   SPRT+ ++GDDWRSAFDAAANGP+ + S SR
Sbjct: 814 TRQLSIHDNRAAAASS-WSSGDGAESTTPSPRTNGSAGDDWRSAFDAAANGPLDIGSLSR 872

Query: 119 SASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPP--PPPPTQSGS 163
            ASNGHSR YS    NGDV +GSNS SRRTPNR P   PP P QSGS
Sbjct: 873 PASNGHSRYYS----NGDVSTGSNSSSRRTPNRTPNRFPPAPPQSGS 915

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6625788|gb|AAF19398.1|AF203882_1 dynamin homolog [Astragalus sinicus]

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/166 (77%), Positives = 138/166 (83%), Gaps = 5/166 (3%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +A+VL QVEKAKEDMLNQLYSSV  QSTA+IEELL EDQNVKRRR+R QKQS LLSKL
Sbjct: 768 VPKAIVLSQVEKAKEDMLNQLYSSVSGQSTAKIEELLLEDQNVKRRRERIQKQSSLLSKL 827

Query: 62  TRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSAS 121
           TRQLSIHDNRAAAA+NWS+  G AESSPR+S   GDDWRSAFDAAAN PVS    SRS S
Sbjct: 828 TRQLSIHDNRAAAATNWSN--GSAESSPRSSGGLGDDWRSAFDAAANSPVSRSGSSRSGS 885

Query: 122 NGHSRRYSDPAENGDV--RSGSNSGSRRTPNRVPPPPPPTQSGSKY 165
           NGHSR YSDPA+NGDV   S SNSGSRRTPNR+PP PP + SG KY
Sbjct: 886 NGHSRHYSDPAQNGDVNSSSNSNSGSRRTPNRLPPAPPGS-SGYKY 930

Source: Astragalus sinicus

Species: Astragalus sinicus

Genus: Astragalus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51477379|gb|AAU04752.1| DRP [Cucumis melo]

 Score =  218 bits (554), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 121/165 (73%), Positives = 137/165 (83%), Gaps = 10/165 (6%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +AVVLCQVEKAKEDMLNQLYSS+ AQS+A+IEELLQEDQNVKRRR+RYQKQS LLSKL
Sbjct: 767 VPKAVVLCQVEKAKEDMLNQLYSSISAQSSAKIEELLQEDQNVKRRRERYQKQSSLLSKL 826

Query: 62  TRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSAS 121
           TRQLSIHDNR AAA+ WSD   G+ESSP+TS + GD+WRSAFDAAANG      Y RS+S
Sbjct: 827 TRQLSIHDNR-AAATGWSD--SGSESSPKTSGSPGDEWRSAFDAAANGRA---DYRRSSS 880

Query: 122 NGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF 166
           NGH    SD  +NGD+ SGSNS SRRTPNR+PP PP + SGS+YF
Sbjct: 881 NGH----SDATQNGDINSGSNSSSRRTPNRLPPAPPQSSSGSRYF 921

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357470181|ref|XP_003605375.1| Dynamin-2B [Medicago truncatula] gi|355506430|gb|AES87572.1| Dynamin-2B [Medicago truncatula]

 Score =  217 bits (553), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/164 (79%), Positives = 141/164 (85%), Gaps = 5/164 (3%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +AVVLCQVEKAKEDMLNQLYSSV  QSTA+IEELL EDQNVKRRR+RYQKQS LLSKL
Sbjct: 764 VPKAVVLCQVEKAKEDMLNQLYSSVSGQSTAKIEELLLEDQNVKRRRERYQKQSSLLSKL 823

Query: 62  TRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSAS 121
           TRQLSIHDNRAAAASNWS+  G AESSPR+S   GDDWR+AFDAA+NG VS RS SRS S
Sbjct: 824 TRQLSIHDNRAAAASNWSN--GSAESSPRSSGP-GDDWRTAFDAASNGSVS-RSGSRSGS 879

Query: 122 NGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKY 165
           NGHSR  SDPA+NGD+ SG NSGSRRTPNR+PP PP + SG KY
Sbjct: 880 NGHSRHNSDPAQNGDLNSGPNSGSRRTPNRLPPAPPGS-SGYKY 922

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120026|ref|XP_002331118.1| predicted protein [Populus trichocarpa] gi|222872846|gb|EEF09977.1| predicted protein [Populus trichocarpa]

 Score =  216 bits (549), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/152 (75%), Positives = 128/152 (84%), Gaps = 12/152 (7%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +AVVLCQVEKAKEDMLNQLYSS+  QSTARIEELLQEDQNVKR+R+RYQKQS LLSKL
Sbjct: 764 VPKAVVLCQVEKAKEDMLNQLYSSISTQSTARIEELLQEDQNVKRKRERYQKQSSLLSKL 823

Query: 62  TRQLSIHDNRAAAASNWSDGGGGAESSPRTSAA-SGDDWRSAFDAAANGPVSLRSYSRSA 120
           TRQLSIHDNRAAAAS+WSD G GAESSPRT+ + SG+DWR+AFD+AANGPV         
Sbjct: 824 TRQLSIHDNRAAAASSWSD-GSGAESSPRTNGSLSGEDWRNAFDSAANGPV-------GP 875

Query: 121 SNGHSRRYSDPAENGDVRSGSNSGSRRTPNRV 152
           S  HSRR SDPA+NGDV   S +GSRRTPNR+
Sbjct: 876 SRSHSRRNSDPAQNGDV---SANGSRRTPNRM 904

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129484|ref|XP_002328728.1| predicted protein [Populus trichocarpa] gi|222839026|gb|EEE77377.1| predicted protein [Populus trichocarpa]

 Score =  216 bits (549), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/154 (77%), Positives = 129/154 (83%), Gaps = 10/154 (6%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +AVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELLQEDQN KRRR+RYQKQS LLS L
Sbjct: 756 VPKAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLQEDQNAKRRRERYQKQSSLLSNL 815

Query: 62  TRQLSIHDNRAAAASNWSD-GGGGAESSPRTSA-ASGDDWRSAFDAAANGPV-SLRSYSR 118
           TR+LSIHDNRAAAASNWSD GGGGAESSPRT+  +SG+DWR+AFDAAANGP  S    SR
Sbjct: 816 TRKLSIHDNRAAAASNWSDGGGGGAESSPRTNGPSSGEDWRNAFDAAANGPADSFGGPSR 875

Query: 119 SASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRV 152
           S    HSRR SDPA+NGDV S S   SRRTP R+
Sbjct: 876 S----HSRRNSDPAQNGDVNSNS---SRRTPTRM 902

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447543|ref|XP_004141527.1| PREDICTED: dynamin-2B-like [Cucumis sativus] gi|449481470|ref|XP_004156193.1| PREDICTED: dynamin-2B-like [Cucumis sativus]

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/165 (75%), Positives = 139/165 (84%), Gaps = 6/165 (3%)

Query: 2   VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
           V +AVVLCQVEKAKEDMLNQLYSS+ AQS+A+IEELLQEDQNVKRRR+RYQKQS LLSKL
Sbjct: 770 VPKAVVLCQVEKAKEDMLNQLYSSISAQSSAKIEELLQEDQNVKRRRERYQKQSSLLSKL 829

Query: 62  TRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSAS 121
           TRQLSIHDNRAAAA  WSD   GAESSP+TS + GD+WRSAFDAAANG      Y RS+S
Sbjct: 830 TRQLSIHDNRAAAA-GWSD--SGAESSPKTSGSPGDEWRSAFDAAANGRA---DYRRSSS 883

Query: 122 NGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF 166
           NGHS   SDP +NGD+ SGSNS SRRTPNR+PP PP + SGS+YF
Sbjct: 884 NGHSGHSSDPTQNGDINSGSNSSSRRTPNRLPPAPPQSSSGSRYF 928

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
TAIR|locus:2202847	920	DL3 "dynamin-like 3" [Arabidop	0.951	0.171	0.692	3.2e-51
TAIR|locus:2012763	914	ADL6 "dynamin-like protein 6"	0.969	0.176	0.674	1.7e-49

TAIR|locus:2202847 DL3 "dynamin-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 539 (194.8 bits), Expect = 3.2e-51, P = 3.2e-51
 Identities = 115/166 (69%), Positives = 130/166 (78%)

Query:     2 VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
             V +AVVLCQVEK+KEDMLNQLYSS+ A    RIE L+QEDQNVKRRRDRYQKQS LLSKL
Sbjct:   759 VPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIESLIQEDQNVKRRRDRYQKQSSLLSKL 818

Query:    62 TRQLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRSAFDAAANGPVSLRSYSRSA 120
             TRQLSIHDNRAAAAS+WSD  G  ESSPRT+  +SG+DW +AF+AAA+GP SL+ Y    
Sbjct:   819 TRQLSIHDNRAAAASSWSDNSG-TESSPRTNGGSSGEDWMNAFNAAASGPDSLKRYG--- 874

Query:   121 SNGHSRRYSDPAENGDVRSGSNSGSRRT-PNRVXXXXXXTQSGSKY 165
             S GHSRRYSDPA+NG+  SGS   SRRT PNR+       QSGS Y
Sbjct:   875 SGGHSRRYSDPAQNGEDSSGSGGSSRRTTPNRLPPAP--PQSGSSY 918

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009504 "cell plate" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030276 "clathrin binding" evidence=IDA

GO:0045334 "clathrin-coated endocytic vesicle" evidence=IDA

GO:0072583 "clathrin-mediated endocytosis" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2012763 ADL6 "dynamin-like protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 523 (189.2 bits), Expect = 1.7e-49, P = 1.7e-49
 Identities = 112/166 (67%), Positives = 126/166 (75%)

Query:     2 VEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKL 61
             V +AVVLCQVEKAKEDMLNQLYSS+ A    RIE L+QEDQNVKRRR+RYQKQS LLSKL
Sbjct:   752 VPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQEDQNVKRRRERYQKQSSLLSKL 811

Query:    62 TRQLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRSAFDAAANGPVSLRSYSRSA 120
             TRQLSIHDNRAAAAS++SD  G  ESSPR S  +SGDDW +AF++AANGP    S S+  
Sbjct:   812 TRQLSIHDNRAAAASSYSDNSG-TESSPRASGGSSGDDWMNAFNSAANGPSD--SLSKYG 868

Query:   121 SNGHSRRYSDPAENGDVRS-GSNSGSRRTPNRVXXXXXXTQSGSKY 165
             S GHSRRYSDPA+NGD  S GS S  R TPNR+      T S  +Y
Sbjct:   869 SGGHSRRYSDPAQNGDAASPGSGSNRRTTPNRLPPAPPPTGSAYRY 914


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.307   0.121   0.333    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      166       160   0.00097  106 3  11 23  0.46    32
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  140 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.95u 0.14s 22.09t   Elapsed:  00:00:01
  Total cpu time:  21.95u 0.14s 22.09t   Elapsed:  00:00:01
  Start:  Fri May 10 09:34:02 2013   End:  Fri May 10 09:34:03 2013

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006896 "Golgi to vacuole transport" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LQ55	DRP2B_ARATH	3, ., 6, ., 5, ., 5	0.7168	0.9518	0.1717	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	166
pfam02212	90	pfam02212, GED, Dynamin GTPase effector domain	2e-08
smart00302	92	smart00302, GED, Dynamin GTPase effector domain	1e-05

>gnl|CDD|202159 pfam02212, GED, Dynamin GTPase effector domain

 Score = 48.6 bits (117), Expect = 2e-08
 Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 1  MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSK 60
           + +A++   V ++KE +  +L   +       ++ELL+ED  + ++R   +K+ E L K
Sbjct: 25 QIPKAIMYFLVNESKESLQKELLQLL--YKKEDLDELLKEDPEIAQKRKELKKRLERLKK 82

Length = 90

>gnl|CDD|128597 smart00302, GED, Dynamin GTPase effector domain

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 1  MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSK 60
           V +A++   V ++K+ + N+L +         ++ELL+ED  +  +R   +K+ ELL K
Sbjct: 27 QVPKAIMYLLVNESKDSLQNELLA--LLYKEELLDELLEEDPEIASKRKELKKRLELLKK 84

Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	166
smart00302	92	GED Dynamin GTPase effector domain.	99.84
PF02212	92	GED: Dynamin GTPase effector domain; InterPro: IPR	99.62
KOG0446	657	consensus Vacuolar sorting protein VPS1, dynamin,	99.44

>smart00302 GED Dynamin GTPase effector domain

Probab=99.84  E-value=9.6e-21  Score=137.96  Aligned_cols=64  Identities=27%  Similarity=0.453  Sum_probs=61.0

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 031064            1 MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLS   66 (166)
Q Consensus         1 ~VPKAIMl~LVnkAKe~LQneL~s~LYk~~~~~l~eLL~Ed~~v~~RRe~c~kmLelLkkA~~qls   66 (166)
                      +||||||||||+++|+.||++||.+||+.  +.+++||+|||.|+++|++|++|+++|++|..-|+
T Consensus        27 ~VPKaI~~~lv~~~~~~lq~~L~~~L~~~--~~~~~LL~E~~~i~~kR~~~~~~l~~L~~A~~~l~   90 (92)
T smart00302       27 QVPKAIMYLLVNESKDSLQNELLALLYKE--ELLDELLEEDPEIASKRKELKKRLELLKKARQIIA   90 (92)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHhCc--ccHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            59999999999999999999999999984  78999999999999999999999999999998774

>PF02212 GED: Dynamin GTPase effector domain; InterPro: IPR003130 Dynamin GTPase effector domain found in proteins related to dynamin

Probab=99.62  E-value=4.8e-16  Score=112.29  Aligned_cols=64  Identities=33%  Similarity=0.473  Sum_probs=58.2

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 031064            1 MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLS   66 (166)
Q Consensus         1 ~VPKAIMl~LVnkAKe~LQneL~s~LYk~~~~~l~eLL~Ed~~v~~RRe~c~kmLelLkkA~~qls   66 (166)
                      .|||+|+||||+++++.|+++|+.+||..  +.+++||.|||.|+++|++|+++++.|++|.+-|+
T Consensus        27 ~Vpk~I~~~lv~~~~~~L~~~l~~~l~~~--~~~~~Ll~Ed~~i~~kR~~l~~~~~~L~~A~~~L~   90 (92)
T PF02212_consen   27 SVPKAIMHFLVNKSKEQLQSELLNELYDE--EDLEELLQEDPEIAEKREELKKKLERLKKAQQILS   90 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--GGCCCCT--GHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhHHhHHHHHHHHhccch--HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999975  55999999999999999999999999999998774

Dynamin is a GTP-hydrolysing protein that is an essential participant in clathrin-mediated endocytosis by cells. It self-assembles into 'collars' in vivo at the necks of invaginated coated pits; the self-assembly of dynamin being coordinated by the GTPase domain. Mutation studies indicate that dynamin functions as a molecular regulator of receptor-mediated endocytosis [].; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 3ZYS_B 3SZR_A 3LJB_B 3T35_C 3T34_A 2X2F_D 2X2E_D 3SNH_A 3ZYC_D 3ZVR_A.

>KOG0446 consensus Vacuolar sorting protein VPS1, dynamin, and related proteins [Intracellular trafficking, secretion, and vesicular transport; General function prediction only]

Probab=99.44  E-value=2.6e-13  Score=127.95  Aligned_cols=67  Identities=31%  Similarity=0.354  Sum_probs=60.8

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 031064            1 MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNR   71 (166)
Q Consensus         1 ~VPKAIMl~LVnkAKe~LQneL~s~LYk~~~~~l~eLL~Ed~~v~~RRe~c~kmLelLkkA~~qlsihdnr   71 (166)
                      .||||||||||+++|++||++|+.+||+ ..++++.||+|+|.|++||++|++|+++|++|..   |+++.
T Consensus       587 ~vpk~i~~~lv~~~k~~l~~~l~~~L~~-~~~~~~~ll~E~~~i~~~R~~~~~~l~~L~~a~~---ii~~~  653 (657)
T KOG0446|consen  587 TVPKALNHELLNEFKDDLPNELDQRLYA-GDEQLESLLKEDPRIKRRRELQQKRLLALQKALS---ILATV  653 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHccCHHHHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence            4899999999999999999999999998 3799999999999999999999999999998854   44444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	166
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	2e-09
3szr_A	608	Interferon-induced GTP-binding protein MX1; interf	3e-05

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A Length = 772

 Score = 54.9 bits (131), Expect = 2e-09
 Identities = 10/60 (16%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 1   MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSK 60
           ++ + ++   +   KE + ++L +++   S      L++E     +RRD   +    L +
Sbjct: 700 LMPKTIMHLMINNTKEFIFSELLANLY--SCGDQNTLMEESAEQAQRRDEMLRMYHALKE 757

>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B Length = 608

 Score = 42.4 bits (99), Expect = 3e-05
 Identities = 6/60 (10%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 1   MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSK 60
            +   +    ++   + +   +   +  Q       LL+E  +   +R   +++   L++
Sbjct: 541 HIPLIIQFFMLQTYGQQLQKAMLQLL--QDKDTYSWLLKERSDTSDKRKFLKERLARLTQ 598

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	166
3szr_A	608	Interferon-induced GTP-binding protein MX1; interf	99.5
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	99.44
3t34_A	360	Dynamin-related protein 1A, linker, dynamin-relat	89.21
1yoz_A	116	Hypothetical protein AF0941; APC5573, midwest cent	83.33

>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B

Probab=99.50  E-value=1.3e-14  Score=131.20  Aligned_cols=64  Identities=11%  Similarity=0.200  Sum_probs=61.1

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 031064            1 MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLS   66 (166)
Q Consensus         1 ~VPKAIMl~LVnkAKe~LQneL~s~LYk~~~~~l~eLL~Ed~~v~~RRe~c~kmLelLkkA~~qls   66 (166)
                      +|||+||||||+++++.||++||.+||+  .+.+++||+||+.|++||++|++|++.|++|.+.|+
T Consensus       541 ~vP~~I~~~lv~~~~~~lq~~l~~~l~~--~~~~~~ll~E~~~~~~~R~~l~~~~~~L~~A~~~l~  604 (608)
T 3szr_A          541 HIPLIIQFFMLQTYGQQLQKAMLQLLQD--KDTYSWLLKERSDTSDKRKFLKERLARLTQARRRLA  604 (608)
T ss_dssp             HHHHHHHHHTTHHHHHHHHHHHHTTTTC--HHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999996  588999999999999999999999999999998775

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A

Probab=99.44  E-value=4.2e-14  Score=133.63  Aligned_cols=63  Identities=14%  Similarity=0.270  Sum_probs=59.4

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhh
Q 031064            1 MVEQAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQL   65 (166)
Q Consensus         1 ~VPKAIMl~LVnkAKe~LQneL~s~LYk~~~~~l~eLL~Ed~~v~~RRe~c~kmLelLkkA~~ql   65 (166)
                      +|||||||+|||.+|+.|+++|+.+||+.  ..+++||.|++.+++||++|.+|+++||+|.+-+
T Consensus       700 ~~pk~im~~~vn~~k~~~~~el~~~ly~~--~~~~~lm~Es~~~~~~r~~~~~~~~~l~~a~~ii  762 (772)
T 3zvr_A          700 LMPKTIMHLMINNTKEFIFSELLANLYSC--GDQNTLMEESAEQAQRRDEMLRMYHALKEALSII  762 (772)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHTHHHHHHHT--CCTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999975  7899999999999999999999999999997654

>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*

Probab=89.21  E-value=0.057  Score=44.62  Aligned_cols=23  Identities=26%  Similarity=0.339  Sum_probs=17.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHh
Q 031064           41 DQNVKRRRDRYQKQSELLSKLTR   63 (166)
Q Consensus        41 d~~v~~RRe~c~kmLelLkkA~~   63 (166)
                      ||+|++||..|.|.|++|++|-.
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~  355 (360)
T 3t34_A          333 DPAIMERRSAISKRLELYRAAQS  355 (360)
T ss_dssp             ----CCCTTHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999854

>1yoz_A Hypothetical protein AF0941; APC5573, midwest center for structural genomics, MCSG, protein structure initiative, PSI, structural genomics; 2.00A {Archaeoglobus fulgidus} SCOP: a.253.1.1

Probab=83.33  E-value=0.76  Score=35.14  Aligned_cols=59  Identities=22%  Similarity=0.148  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHHHHHHhccchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 031064           11 VEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNR   71 (166)
Q Consensus        11 VnkAKe~LQneL~s~LYk~~~~~l~eLL~Ed~~v~~RRe~c~kmLelLkkA~~qlsihdnr   71 (166)
                      |.+||+-.-.+=+.++++..-+.+-.+..--..+++.=+.|-+||+.|  |..||++|=+|
T Consensus        23 VeeAk~L~D~eni~EmFRsD~E~I~~~f~~G~~t~EEa~~nl~~LK~Y--avSQL~~Hy~r   81 (116)
T 1yoz_A           23 VEEADKLLDQKNIFEMFRSDCEEILNLYKSGKAEKEEVQRNFYLLKTY--VVSQLSIHFER   81 (116)
T ss_dssp             GGGHHHHTCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH--HHHTHHHHHHH
T ss_pred             HHHHHHccCHHHHHHHHHhhHHHHHHHHHcCCccHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence            666766666666777776545555566666677778888999999998  78999999999

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00