Citrus Sinensis ID: 031070

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MSKLILATVGILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccccccccEEcEEccccccHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEEEccccEEEEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccccccccccccEEccccccccHHHHHHHHHHHHHcccccccccccccEcccEEEEEEEccEEEEEEEEEEccccEEEEEEEccccccccccccc
Coil and Loop (DISEMBL)
MSKLILATVGILLLLISssnassnsnyWSLANQFLVPQNAARYALrmrpmqwdpnLARYAQQYANKRrydcelkhsngpygenifwgsgngwtpAQAVMAWISekksydywsnscsggqqcghytQVVRsrtrrvgcakvtcfggrgvfitcnydppgnyigerpy
Flexible Loop (DISEMBL)
MSKLILATVGILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKvtcfggrgvfitcnydppgnyigerpy
Low Complexity Region (SEG)
MSKlilatvgillllisssnassnsnywslanQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY
Disordered region (IsUnstruct)
***LILATVGILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNY******
Disordered Region (DISOPRED)
*SKLILATVGILLLLISS*************NQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY
Disordered Region (DISEMBL)
MSKLILATVGILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY
Disordered Region (DISPRO)
MSKLILATVGILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGER**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSKLILATVGILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	166	2.2.26 [Sep-21-2011]
Q40374	173	Pathogenesis-related prot	N/A	no	0.831	0.797	0.666	1e-52
Q05968	164	Pathogenesis-related prot	N/A	no	0.807	0.817	0.555	6e-40
P35792	164	Pathogenesis-related prot	N/A	no	0.807	0.817	0.540	4e-39
P09042	168	Pathogenesis-related prot	N/A	no	0.963	0.952	0.475	2e-38
Q00008	167	Pathogenesis-related prot	N/A	no	0.951	0.946	0.477	2e-38
P35793	164	Pathogenesis-related prot	N/A	no	0.939	0.951	0.509	5e-38
P07053	168	Pathogenesis-related prot	N/A	no	0.963	0.952	0.463	2e-37
P08299	168	Pathogenesis-related prot	N/A	no	0.795	0.785	0.526	1e-34
P33154	161	Pathogenesis-related prot	no	no	0.933	0.962	0.454	2e-33
P11670	177	Basic form of pathogenesi	N/A	no	0.921	0.864	0.493	4e-33

>sp|Q40374|PR1_MEDTR Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1

 Score =  205 bits (521), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 92/138 (66%), Positives = 105/138 (76%)

Query: 29  SLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGS 88
           S  NQFL+PQN AR A+ +RP+ WD  L  YAQ YAN+RR DC L+HSNGPYGENIFWGS
Sbjct: 36  SFKNQFLIPQNIARAAVGLRPLVWDDKLTHYAQWYANQRRNDCALEHSNGPYGENIFWGS 95

Query: 89  GNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGV 148
           G GW PAQAV AW+ EK+ Y+YW NSC  G+ CGHYTQVV   T +VGCA V C   +G 
Sbjct: 96  GVGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHYTQVVWGSTTKVGCASVVCSDDKGT 155

Query: 149 FITCNYDPPGNYIGERPY 166
           F+TCNYDPPGNY GERPY
Sbjct: 156 FMTCNYDPPGNYYGERPY 173

Probably involved in the defense reaction of plants against pathogens.
Medicago truncatula (taxid: 3880)

>sp|Q05968|PR1_HORVU Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1

 Score =  163 bits (412), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 75/135 (55%), Positives = 96/135 (71%), Gaps = 1/135 (0%)

Query: 33  QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGS-GNG 91
            ++ P NAAR A+ +  + W   L  +AQ YAN+R  DC+L+HS GPYGENIFWGS G  
Sbjct: 30  DYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENIFWGSAGAD 89

Query: 92  WTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFIT 151
           W  + AV +W+SEKK YDY SN+C+ G+ CGHYTQVV   +  +GCA+V C   RGVFIT
Sbjct: 90  WKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGVFIT 149

Query: 152 CNYDPPGNYIGERPY 166
           CNY+P GN IG++PY
Sbjct: 150 CNYEPRGNIIGQKPY 164

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|P35792|PR12_HORVU Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1

 Score =  160 bits (404), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 73/135 (54%), Positives = 96/135 (71%), Gaps = 1/135 (0%)

Query: 33  QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGS-GNG 91
            ++ P NAAR A+ +  + W   L  +AQ YAN+R  DC+L+HS GPYGENIFWGS G  
Sbjct: 30  DYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENIFWGSAGAD 89

Query: 92  WTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFIT 151
           W  A AV +W++EKK Y+Y SN+C+ G+ CGHYTQVV   +  +GCA+V C   RGVFIT
Sbjct: 90  WKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGVFIT 149

Query: 152 CNYDPPGNYIGERPY 166
           CNY+P GN +G++PY
Sbjct: 150 CNYEPRGNIVGQKPY 164

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3

 Score =  158 bits (399), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/166 (47%), Positives = 105/166 (63%), Gaps = 6/166 (3%)

Query: 1   MSKLILATVGILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYA 60
           MS   L +  +L L+IS S  + NS        +L   N AR  + + P+ WD  +A YA
Sbjct: 9   MSSFFLVSTLLLFLIISHSCHAQNSQ-----QDYLDAHNTARADVGVEPLTWDDQVAAYA 63

Query: 61  QQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQ 120
           Q YA++   DC L HS+G YGEN+ WGSG+  T A+AV  W++EK+ Y + SN+C+ GQ 
Sbjct: 64  QNYASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQV 123

Query: 121 CGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
           CGHYTQVV   + RVGCA+V C  G G  ++CNYDPPGN IG+ PY
Sbjct: 124 CGHYTQVVWRNSVRVGCARVQCNNG-GYIVSCNYDPPGNVIGKSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|Q00008|PRMS_MAIZE Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1

 Score =  158 bits (399), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/159 (47%), Positives = 105/159 (66%), Gaps = 1/159 (0%)

Query: 9   VGILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRR 68
           V +L L+++++ A   S   +    +L PQN+AR A+ + P+ W   L ++A++YA +R 
Sbjct: 9   VLLLWLVMAAATAVHPSYSENSPQDYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAAQRA 68

Query: 69  YDCELKHSNGPYGENIFWGS-GNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQV 127
            DC L+HS GPYGENIFWGS G  W    AV +W+ EK+ Y+Y +NSC+ G+ CGHYTQV
Sbjct: 69  GDCRLQHSGGPYGENIFWGSAGFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHYTQV 128

Query: 128 VRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
           V   T  +GCA+V C   RGVFI CNY+P GN  G +PY
Sbjct: 129 VWRATTSIGCARVVCRDNRGVFIICNYEPRGNIAGMKPY 167

Probably involved in the defense reaction of plants against pathogens.

Zea mays (taxid: 4577)

>sp|P35793|PR13_HORVU Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1

 Score =  156 bits (395), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 80/157 (50%), Positives = 105/157 (66%), Gaps = 1/157 (0%)

Query: 11  ILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYD 70
           ILL L  S+   + S   +    ++ P NAAR A+ +  + W   L  +AQ YAN+R  D
Sbjct: 8   ILLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRIND 67

Query: 71  CELKHSNGPYGENIFWGS-GNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVR 129
           C+L+HS GPYGENIFWGS G  W  + AV +W+SEKK YDY SN+C+ G+ CGHYTQVV 
Sbjct: 68  CKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVW 127

Query: 130 SRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
             +  +GCA+V C   RGVFITCNY+P GN +G++PY
Sbjct: 128 RASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1

 Score =  154 bits (389), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 77/166 (46%), Positives = 103/166 (62%), Gaps = 6/166 (3%)

Query: 1   MSKLILATVGILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYA 60
           M    L +  +L L+IS S+ + NS        +L   N AR  + + P+ WD  +A YA
Sbjct: 9   MPSFFLVSTLLLFLIISHSSHAQNSQ-----QDYLDAHNTARADVGVEPLTWDNGVAAYA 63

Query: 61  QQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQ 120
           Q Y ++   DC L HS+G YGEN+  GSG+  T A+AV  W+ EK+ YD+ SN+C+ GQ 
Sbjct: 64  QNYVSQLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQV 123

Query: 121 CGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
           CGHYTQVV   + RVGCA+V C  G G  ++CNYDPPGN IG+ PY
Sbjct: 124 CGHYTQVVWRNSVRVGCARVKCNNG-GYVVSCNYDPPGNVIGQSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1

 Score =  145 bits (366), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/133 (52%), Positives = 90/133 (67%), Gaps = 1/133 (0%)

Query: 34  FLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWT 93
           +L   N AR  + + P+ WD  +A YAQ YA++   DC L HS+G YGEN+  GSG+  T
Sbjct: 37  YLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAEGSGDFMT 96

Query: 94  PAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCN 153
            A+AV  W+ EK+ YD+ SN+C+ GQ CGHYTQVV   + RVGCA+V C  G G  ++CN
Sbjct: 97  AAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNG-GYVVSCN 155

Query: 154 YDPPGNYIGERPY 166
           YDPPGNY GE PY
Sbjct: 156 YDPPGNYRGESPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P33154|PR1_ARATH Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1

 Score =  141 bits (355), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 104/165 (63%), Gaps = 10/165 (6%)

Query: 2   SKLILATVGILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQ 61
           S+ ++  V ++  L+  S A  +         +L   N AR A+ + PMQWD  +A YA+
Sbjct: 7   SRFLIVFVALVGALVLPSKAQDSPQ------DYLRVHNQARGAVGVGPMQWDERVAAYAR 60

Query: 62  QYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQC 121
            YA + R +C L HS GPYGEN+ WGSG+  +   AV  W+SEK +Y+Y +N+C+G   C
Sbjct: 61  SYAEQLRGNCRLIHSGGPYGENLAWGSGD-LSGVSAVNMWVSEKANYNYAANTCNG--VC 117

Query: 122 GHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
           GHYTQVV  ++ R+GCAKV C  G G  I+CNYDP GNY+ E+PY
Sbjct: 118 GHYTQVVWRKSVRLGCAKVRCNNG-GTIISCNYDPRGNYVNEKPY 161

Partially responsible for acquired pathogen resistance.

Arabidopsis thaliana (taxid: 3702)

>sp|P11670|PRB1_TOBAC Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1

 Score =  140 bits (352), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/162 (49%), Positives = 100/162 (61%), Gaps = 9/162 (5%)

Query: 5   ILATVGILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYA 64
           I+A      +LI SS A ++         +L P NAAR  + + PM WD  LA YAQ YA
Sbjct: 7   IVACFITFAILIHSSKAQNSPQ------DYLNPHNAARRQVGVGPMTWDNRLAAYAQNYA 60

Query: 65  NKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHY 124
           N+R  DC + HS+GPYGEN+   +      A AV  W+ EK+ YDY SNSC GG  CGHY
Sbjct: 61  NQRIGDCGMIHSHGPYGENL-AAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGG-VCGHY 118

Query: 125 TQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
           TQVV   + R+GCA+V    G   FITCNYDPPGN+IG+RP+
Sbjct: 119 TQVVWRNSVRLGCARVRSNNGW-FFITCNYDPPGNFIGQRPF 159

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
224142281	168	predicted protein [Populus trichocarpa]	0.963	0.952	0.687	5e-62
224117614	138	predicted protein [Populus trichocarpa]	0.831	1.0	0.739	4e-59
351724261	175	uncharacterized protein LOC100306470 pre	1.0	0.948	0.614	3e-58
255583299	179	STS14 protein precursor, putative [Ricin	0.843	0.782	0.75	6e-58
225446154	173	PREDICTED: pathogenesis-related protein	0.939	0.901	0.701	2e-56
147828622	173	hypothetical protein VITISV_015312 [Viti	0.939	0.901	0.695	6e-56
449457129	170	PREDICTED: pathogenesis-related protein	0.825	0.805	0.729	9e-56
356564862	168	PREDICTED: pathogenesis-related protein	0.951	0.940	0.615	9e-56
388513837	180	unknown [Lotus japonicus]	0.981	0.905	0.590	7e-54
357479767	173	Pathogenesis-related protein PR-1 [Medic	0.831	0.797	0.666	5e-51

>gi|224142281|ref|XP_002324487.1| predicted protein [Populus trichocarpa] gi|222865921|gb|EEF03052.1| predicted protein [Populus trichocarpa]

 Score =  242 bits (617), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 112/163 (68%), Positives = 133/163 (81%), Gaps = 3/163 (1%)

Query: 7   ATVGILLLLISSSNASSNSN---YWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQY 63
           A++ I +LL+SSS+A        Y S AN+FL PQNA R +LR+RP+ WD  L RYAQ Y
Sbjct: 6   ASIAIFILLVSSSHAVITKRPNPYLSTANRFLAPQNAVRASLRIRPLVWDAKLERYAQWY 65

Query: 64  ANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGH 123
           AN+RR DC LKHSNGPYGENIFWGSG+ WTPAQA +AW+SE+K YDY SNSC+ G++CGH
Sbjct: 66  ANQRRSDCALKHSNGPYGENIFWGSGSDWTPAQAAVAWVSERKCYDYRSNSCAQGEECGH 125

Query: 124 YTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
           YTQVV   TRR+GCA+VTCFGGRGVF+TCNYDPPGNYIGE+PY
Sbjct: 126 YTQVVWRNTRRIGCARVTCFGGRGVFMTCNYDPPGNYIGEKPY 168

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117614|ref|XP_002331680.1| predicted protein [Populus trichocarpa] gi|222874099|gb|EEF11230.1| predicted protein [Populus trichocarpa]

 Score =  232 bits (592), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 102/138 (73%), Positives = 121/138 (87%)

Query: 29  SLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGS 88
           S ANQF+ PQNAAR +LR+RP+ WD NLARYAQ Y N+RRYDC+LKHSNGPYGENIFWGS
Sbjct: 1   SAANQFMAPQNAARASLRIRPLVWDANLARYAQSYCNQRRYDCDLKHSNGPYGENIFWGS 60

Query: 89  GNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGV 148
           G+GW+PAQA  AW+SE+K YDYWSNSC+  Q+CGHYTQ+V + T R+GCA+V CF GRGV
Sbjct: 61  GSGWSPAQAAAAWVSERKWYDYWSNSCAEDQECGHYTQIVWNSTERIGCARVDCFRGRGV 120

Query: 149 FITCNYDPPGNYIGERPY 166
           F++CNYDPPGNYIGE+PY
Sbjct: 121 FMSCNYDPPGNYIGEKPY 138

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724261|ref|NP_001235516.1| uncharacterized protein LOC100306470 precursor [Glycine max] gi|255628643|gb|ACU14666.1| unknown [Glycine max]

 Score =  229 bits (583), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 105/171 (61%), Positives = 129/171 (75%), Gaps = 5/171 (2%)

Query: 1   MSKLILATVGILLLLISSSNAS-----SNSNYWSLANQFLVPQNAARYALRMRPMQWDPN 55
           +SK  L+   + LLL++++ A+     +     S ANQFL+PQNAAR  LR+RP+ WD  
Sbjct: 5   ISKHFLSCFALFLLLVATTYATVVPTTTQKPPRSFANQFLIPQNAARAVLRLRPLVWDSK 64

Query: 56  LARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSC 115
           LA YAQ YAN+RR DC L+HSNGPYGENIFWGSG GW PAQAV AW+ E++ Y+YW NSC
Sbjct: 65  LAHYAQWYANQRRNDCALEHSNGPYGENIFWGSGTGWKPAQAVSAWVEERQWYNYWHNSC 124

Query: 116 SGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
           + GQ CGHYTQ+V S TR++GCA V C GG+G F+TCNYDPPGNY GERPY
Sbjct: 125 ANGQMCGHYTQIVWSTTRKIGCASVVCSGGKGTFMTCNYDPPGNYYGERPY 175

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255583299|ref|XP_002532413.1| STS14 protein precursor, putative [Ricinus communis] gi|223527887|gb|EEF29977.1| STS14 protein precursor, putative [Ricinus communis]

 Score =  228 bits (581), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 105/140 (75%), Positives = 118/140 (84%)

Query: 27  YWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFW 86
           Y S ANQFL P NAAR ALRM P+ WD  LA YAQ YAN+RR+DC+L+HSNGPYGENIFW
Sbjct: 40  YLSTANQFLGPHNAARAALRMPPLIWDTRLANYAQWYANQRRFDCDLRHSNGPYGENIFW 99

Query: 87  GSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGR 146
           GSG GWTPAQAV AW+SE+K Y+YWSNSC G Q+CGHYTQ+V  +TRR+GCAKVTC    
Sbjct: 100 GSGTGWTPAQAVTAWVSERKWYNYWSNSCYGHQECGHYTQIVWRKTRRIGCAKVTCSDDL 159

Query: 147 GVFITCNYDPPGNYIGERPY 166
           GVF+TCNYDPPGNYIGERPY
Sbjct: 160 GVFMTCNYDPPGNYIGERPY 179

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446154|ref|XP_002276768.1| PREDICTED: pathogenesis-related protein PR-1 [Vitis vinifera] gi|297735334|emb|CBI17774.3| unnamed protein product [Vitis vinifera]

 Score =  223 bits (567), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 115/164 (70%), Positives = 133/164 (81%), Gaps = 8/164 (4%)

Query: 11  ILLLLISSSNA--------SSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQ 62
           I L+LI+SS+A        SS+S+Y SLANQFL P NAAR A+ MR + WD  LA YA+ 
Sbjct: 10  IYLILITSSSAVDAITKPSSSSSSYLSLANQFLAPHNAARTAVGMRRLVWDSKLAHYAEW 69

Query: 63  YANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCG 122
           YAN+RR DC LKHSNG YGENIFWGSG+GWTPAQAV AW+SE++ YDY SNSC+ GQ+CG
Sbjct: 70  YANQRRRDCALKHSNGQYGENIFWGSGSGWTPAQAVAAWVSERRWYDYGSNSCAYGQECG 129

Query: 123 HYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
           HYTQ+V   TRRVGCA+V C+GGRGVFITCNYDPPGNYIGERPY
Sbjct: 130 HYTQIVWGSTRRVGCARVNCYGGRGVFITCNYDPPGNYIGERPY 173

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147828622|emb|CAN64209.1| hypothetical protein VITISV_015312 [Vitis vinifera]

 Score =  221 bits (564), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 114/164 (69%), Positives = 133/164 (81%), Gaps = 8/164 (4%)

Query: 11  ILLLLISSSNA--------SSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQ 62
           I L+LI+SS+A        SS+S+Y SLANQFL P NAAR A+ MR + WD  LA YA+ 
Sbjct: 10  IYLILITSSSAVDAITKPSSSSSSYLSLANQFLAPHNAARTAVGMRRLVWDSKLAHYAEW 69

Query: 63  YANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCG 122
           YAN+RR DC LKHSNG YGENIFWGSG+GWTPAQAV AW+SE++ YDY SNSC+ GQ+CG
Sbjct: 70  YANQRRRDCALKHSNGQYGENIFWGSGSGWTPAQAVAAWVSERRWYDYGSNSCAYGQECG 129

Query: 123 HYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
           HYTQ+V   TRRVGCA+V C+GGRGVF+TCNYDPPGNYIGERPY
Sbjct: 130 HYTQIVWGSTRRVGCARVNCYGGRGVFMTCNYDPPGNYIGERPY 173

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457129|ref|XP_004146301.1| PREDICTED: pathogenesis-related protein PR-1-like [Cucumis sativus] gi|449528154|ref|XP_004171071.1| PREDICTED: pathogenesis-related protein PR-1-like [Cucumis sativus]

 Score =  221 bits (563), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 100/137 (72%), Positives = 111/137 (81%)

Query: 30  LANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSG 89
           L  QFL P NAARYALR+ P+ WDP LARYAQ YANKRR DC L+HS GPYGENIFWGSG
Sbjct: 34  LQKQFLAPHNAARYALRLSPLVWDPKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSG 93

Query: 90  NGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVF 149
             WTPAQAV  W+SE+K Y YW+NSC  G+ CGHYTQ+V   TRR+GCA+VTC  G+GVF
Sbjct: 94  KDWTPAQAVADWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVF 153

Query: 150 ITCNYDPPGNYIGERPY 166
           ITCNYDPPGNYIG RPY
Sbjct: 154 ITCNYDPPGNYIGMRPY 170

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564862|ref|XP_003550666.1| PREDICTED: pathogenesis-related protein PR-1-like [Glycine max]

 Score =  221 bits (562), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 101/164 (61%), Positives = 123/164 (75%), Gaps = 6/164 (3%)

Query: 9   VGILLLLISSSNA------SSNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQ 62
           + + L L++++ A      ++     S ANQFL+PQNAAR  LR+RP+ WD  LA YAQ 
Sbjct: 5   LAMFLFLVTTTYANTVVPTTTQKPPRSFANQFLIPQNAARAVLRLRPLVWDSKLAHYAQW 64

Query: 63  YANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCG 122
           YAN+RR DC L+HSNGPYGENIFWGSG GW PAQAV AW+ E++ Y+YW NSC+ GQ CG
Sbjct: 65  YANQRRNDCALEHSNGPYGENIFWGSGTGWEPAQAVSAWVEERQWYNYWHNSCANGQMCG 124

Query: 123 HYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
           HYTQ+V S TR+VGCA V C  G+G F+TCNYDPPGNY GERPY
Sbjct: 125 HYTQIVWSTTRKVGCASVVCSAGKGTFMTCNYDPPGNYYGERPY 168

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388513837|gb|AFK44980.1| unknown [Lotus japonicus]

 Score =  214 bits (546), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 101/171 (59%), Positives = 122/171 (71%), Gaps = 8/171 (4%)

Query: 4   LILATVGILLLLISSSNASSNSNYW--------SLANQFLVPQNAARYALRMRPMQWDPN 55
           L L     L LL+  + A+  + Y         S ANQFL+PQN AR  LR++P+ WD  
Sbjct: 10  LSLKCFITLFLLVVFTLATHANAYLVPIQKPQRSFANQFLIPQNRARSLLRLKPLVWDSK 69

Query: 56  LARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSC 115
           L  YAQ YAN+RR DC L+HSNGPYGENIFWGSG GW P+QAV AW+ E++ Y+YW NSC
Sbjct: 70  LEHYAQWYANQRRNDCALEHSNGPYGENIFWGSGTGWKPSQAVDAWVEERQWYNYWHNSC 129

Query: 116 SGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
           + G+ CGHYTQ+V   TR+VGCA VTC GG+G F+TCNYDPPGNY GERPY
Sbjct: 130 ANGEMCGHYTQIVWGDTRKVGCASVTCSGGQGTFMTCNYDPPGNYYGERPY 180

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357479767|ref|XP_003610169.1| Pathogenesis-related protein PR-1 [Medicago truncatula] gi|2500715|sp|Q40374.1|PR1_MEDTR RecName: Full=Pathogenesis-related protein PR-1; Flags: Precursor gi|505553|emb|CAA56174.1| PR-1 [Medicago truncatula] gi|355511224|gb|AES92366.1| Pathogenesis-related protein PR-1 [Medicago truncatula] gi|388502720|gb|AFK39426.1| unknown [Medicago truncatula]

 Score =  205 bits (521), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 92/138 (66%), Positives = 105/138 (76%)

Query: 29  SLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGS 88
           S  NQFL+PQN AR A+ +RP+ WD  L  YAQ YAN+RR DC L+HSNGPYGENIFWGS
Sbjct: 36  SFKNQFLIPQNIARAAVGLRPLVWDDKLTHYAQWYANQRRNDCALEHSNGPYGENIFWGS 95

Query: 89  GNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGV 148
           G GW PAQAV AW+ EK+ Y+YW NSC  G+ CGHYTQVV   T +VGCA V C   +G 
Sbjct: 96  GVGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHYTQVVWGSTTKVGCASVVCSDDKGT 155

Query: 149 FITCNYDPPGNYIGERPY 166
           F+TCNYDPPGNY GERPY
Sbjct: 156 FMTCNYDPPGNYYGERPY 173

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
TAIR|locus:2118771	161	AT4G30320 "AT4G30320" [Arabido	0.801	0.826	0.634	5.2e-49
TAIR|locus:504954862	207	AT5G57625 "AT5G57625" [Arabido	0.801	0.642	0.609	2.1e-45
TAIR|locus:2117547	210	AT4G25790 "AT4G25790" [Arabido	0.807	0.638	0.589	3.1e-44
TAIR|locus:2117537	190	AT4G25780 "AT4G25780" [Arabido	0.801	0.7	0.586	1.1e-41
TAIR|locus:2134178	163	AT4G33720 "AT4G33720" [Arabido	0.789	0.803	0.541	3.9e-37
TAIR|locus:2125244	185	AT4G31470 "AT4G31470" [Arabido	0.801	0.718	0.529	8e-37
TAIR|locus:2091196	161	AT3G19690 "AT3G19690" [Arabido	0.795	0.819	0.551	2.4e-35
TAIR|locus:2035317	241	AT1G01310 "AT1G01310" [Arabido	0.801	0.551	0.5	1.1e-34
TAIR|locus:2064294	161	PR1 "AT2G14610" [Arabidopsis t	0.777	0.801	0.526	1.3e-34
TAIR|locus:2134193	172	AT4G33730 "AT4G33730" [Arabido	0.783	0.755	0.522	1.7e-34

TAIR|locus:2118771 AT4G30320 "AT4G30320" [Arabidopsis thaliana (taxid:3702)]

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 85/134 (63%), Positives = 107/134 (79%)

Query:    33 QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGW 92
             QF+ PQNAAR  LR++P++WD  LARYAQ +AN+RR DC L HSNGPYGEN+FWGSGN W
Sbjct:    29 QFMGPQNAARAHLRLKPLKWDAKLARYAQWWANQRRGDCALTHSNGPYGENLFWGSGNRW 88

Query:    93 TPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITC 152
              P+QA   W+SE +SY+Y SNSC+  + CGHYTQ+V   T+++GCA V C GG GVF+TC
Sbjct:    89 GPSQAAYGWLSEARSYNYRSNSCNS-EMCGHYTQIVWKNTQKIGCAHVICNGGGGVFLTC 147

Query:   153 NYDPPGNYIGERPY 166
             NYDPPGN++G +PY
Sbjct:   148 NYDPPGNFLGRKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:504954862 AT5G57625 "AT5G57625" [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 81/133 (60%), Positives = 98/133 (73%)

Query:    34 FLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWT 93
             FL P NA R  L + P+ WD  LA YA  +AN+RRYDC L HS GPYGEN+FWGSG+ W 
Sbjct:    75 FLDPHNALRSGLGLPPLIWDGKLASYATWWANQRRYDCSLTHSTGPYGENLFWGSGSSWA 134

Query:    94 PAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCN 153
             P  AV +WI E +SY++ +NSC G   CGHYTQ+V   T+R+GCA+V C  G GVFITCN
Sbjct:   135 PGFAVQSWIVEGRSYNHNTNSCDGSGMCGHYTQMVWRDTKRLGCARVVCENGAGVFITCN 194

Query:   154 YDPPGNYIGERPY 166
             YDPPGNY+GE+PY
Sbjct:   195 YDPPGNYVGEKPY 207

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117547 AT4G25790 "AT4G25790" [Arabidopsis thaliana (taxid:3702)]

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 79/134 (58%), Positives = 97/134 (72%)

Query:    33 QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGW 92
             QFL P N  R  L + P+ WD  +A YA  +AN+RRYDC L HS GPYGEN+FWGSG+ +
Sbjct:    77 QFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGPYGENLFWGSGSDF 136

Query:    93 TPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITC 152
             T   AV +W  E KSY++ +N+C G   CGHYTQ+V   TRR+GCA+V C  G GVFITC
Sbjct:   137 TSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGCARVVCENGAGVFITC 196

Query:   153 NYDPPGNYIGERPY 166
             NYDPPGNY+GE+PY
Sbjct:   197 NYDPPGNYVGEKPY 210

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:2117537 AT4G25780 "AT4G25780" [Arabidopsis thaliana (taxid:3702)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 81/138 (58%), Positives = 97/138 (70%)

Query:    33 QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHS--NGPY--GENIFWGS 88
             QFL   N  R A    P+ WD  L  YAQ +AN+RR DC L+HS  NG +  GENI+WG 
Sbjct:    54 QFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGY 113

Query:    89 GNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGV 148
             G  W+PA AV+AW SEK+ Y Y SN+C  GQ CGHYTQ+V   TRRVGCA+V C  G G+
Sbjct:   114 GANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVCDNG-GI 172

Query:   149 FITCNYDPPGNYIGERPY 166
             F+TCNYDPPGNYIG++PY
Sbjct:   173 FMTCNYDPPGNYIGQKPY 190

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134178 AT4G33720 "AT4G33720" [Arabidopsis thaliana (taxid:3702)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 72/133 (54%), Positives = 93/133 (69%)

Query:    34 FLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWT 93
             FL   N AR  + + P++WD  +A YA+ YAN+R+ DC +KHS+G YGENI W SG+  T
Sbjct:    33 FLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAWSSGS-MT 91

Query:    94 PAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCN 153
                AV  W+ E+  YDY SN+C+  +QCGHYTQVV   + R+GCAKV C  G+  FITCN
Sbjct:    92 GVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRCNNGQ-TFITCN 150

Query:   154 YDPPGNYIGERPY 166
             YDPPGN++GE PY
Sbjct:   151 YDPPGNWVGEWPY 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2125244 AT4G31470 "AT4G31470" [Arabidopsis thaliana (taxid:3702)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 71/134 (52%), Positives = 88/134 (65%)

Query:    33 QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGW 92
             QFL P N  R  LR+ P++W  +LA YA ++A  RR DC+L HS GPYGEN+FWGSG GW
Sbjct:    53 QFLRPHNILRAKLRLPPLKWSNSLALYASRWARTRRGDCKLIHSGGPYGENLFWGSGKGW 112

Query:    93 TPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITC 152
             TP  AV AW SE K YD  ++ C     C HYTQ+V  ++ R+GCA   C  G   FI C
Sbjct:   113 TPRDAVAAWASEMKYYDRRTSHCKANGDCLHYTQLVWKKSSRIGCAISFCKTG-DTFIIC 171

Query:   153 NYDPPGNYIGERPY 166
             NYDPPGN +G+ P+
Sbjct:   172 NYDPPGNIVGQPPF 185

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2091196 AT3G19690 "AT3G19690" [Arabidopsis thaliana (taxid:3702)]

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 75/136 (55%), Positives = 89/136 (65%)

Query:    33 QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGW 92
             QFL   N AR  + + P+ WD  +A YA  YAN+R  DC L HSNGP+GENI   SG   
Sbjct:    28 QFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHSNGPFGENIAMSSGE-M 86

Query:    93 TPAQAVMAWISEKKSYDYWSNSCS--GGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFI 150
             +   A   WI+EK+ YDY SN+C+   G  C HYTQVV   T R+GCAKV C  G G FI
Sbjct:    87 SAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVRLGCAKVVCNSG-GTFI 145

Query:   151 TCNYDPPGNYIGERPY 166
             TCNYDPPGNYIGE+P+
Sbjct:   146 TCNYDPPGNYIGEKPF 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2035317 AT1G01310 "AT1G01310" [Arabidopsis thaliana (taxid:3702)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 67/134 (50%), Positives = 81/134 (60%)

Query:    33 QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGW 92
             +FL+  N  R  +   P QWD  LA YA+ +AN+R  DC L HSNGPYGENIFW   N W
Sbjct:    87 EFLIAHNLVRARVGEPPFQWDGRLAAYARTWANQRVGDCRLVHSNGPYGENIFWAGKNNW 146

Query:    93 TPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITC 152
             +P   V  W  E K YD   N+C     CGHYTQ+V   + +VGCA V C  G GV+  C
Sbjct:   147 SPRDIVNVWADEDKFYDVKGNTCEPQHMCGHYTQIVWRDSTKVGCASVDCSNG-GVYAIC 205

Query:   153 NYDPPGNYIGERPY 166
              Y+PPGNY GE P+
Sbjct:   206 VYNPPGNYEGENPF 219

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2064294 PR1 "AT2G14610" [Arabidopsis thaliana (taxid:3702)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 70/133 (52%), Positives = 92/133 (69%)

Query:    34 FLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWT 93
             +L   N AR A+ + PMQWD  +A YA+ YA + R +C L HS GPYGEN+ WGSG+  +
Sbjct:    33 YLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENLAWGSGD-LS 91

Query:    94 PAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCN 153
                AV  W+SEK +Y+Y +N+C+G   CGHYTQVV  ++ R+GCAKV C  G G  I+CN
Sbjct:    92 GVSAVNMWVSEKANYNYAANTCNG--VCGHYTQVVWRKSVRLGCAKVRCNNG-GTIISCN 148

Query:   154 YDPPGNYIGERPY 166
             YDP GNY+ E+PY
Sbjct:   149 YDPRGNYVNEKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0009627 "systemic acquired resistance" evidence=IEP;RCA

GO:0005618 "cell wall" evidence=IDA

GO:0010266 "response to vitamin B1" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0006952 "defense response" evidence=TAS

TAIR|locus:2134193 AT4G33730 "AT4G33730" [Arabidopsis thaliana (taxid:3702)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 70/134 (52%), Positives = 91/134 (67%)

Query:    34 FLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYD-CELKHSNGPYGENIFWGSGNGW 92
             +L P NAAR A++++P++WD  +A  AQ YAN      C L+HS+GPYGEN+ +GSG+  
Sbjct:    42 YLRPHNAARAAVKVKPLRWDFGIATVAQDYANHLASGPCSLEHSSGPYGENLAFGSGD-M 100

Query:    93 TPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITC 152
             + AQAV  W+ EK  YD++SNSC G   CGHYTQVV   + R+GC K  C  G  + + C
Sbjct:   101 SAAQAVAMWVHEKSYYDFYSNSCHG-PACGHYTQVVWRGSARLGCGKAKCNNGASI-VVC 158

Query:   153 NYDPPGNYIGERPY 166
             NYDP GNYIG RPY
Sbjct:   159 NYDPAGNYIGARPY 172

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q05968	PR1_HORVU	No assigned EC number	0.5555	0.8072	0.8170	N/A	no
P35792	PR12_HORVU	No assigned EC number	0.5407	0.8072	0.8170	N/A	no
P35793	PR13_HORVU	No assigned EC number	0.5095	0.9397	0.9512	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	166
cd05381	136	cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like ex	2e-81
smart00198	144	smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 fa	5e-34
cd05384	129	cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like ex	2e-33
cd05380	144	cd05380, SCP_euk, SCP_euk: SCP-like extracellular	7e-30
cd00168	122	cd00168, SCP, SCP: SCP-like extracellular protein	2e-29
cd05382	132	cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-lik	6e-27
cd05559	136	cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracel	8e-27
cd05385	144	cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-l	1e-24
pfam00188	121	pfam00188, CAP, Cysteine-rich secretory protein fa	2e-19
cd05383	138	cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellu	1e-13
cd05379	122	cd05379, SCP_bacterial, SCP_bacterial: SCP-like ex	0.003

>gnl|CDD|240181 cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

 Score =  236 bits (604), Expect = 2e-81
 Identities = 89/136 (65%), Positives = 104/136 (76%)

Query: 31  ANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGN 90
              FL   NAAR A+ + P++WD  LA YAQ+YAN+RR DC L HSNGPYGEN+FWGSG 
Sbjct: 1   PQDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSNGPYGENLFWGSGG 60

Query: 91  GWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFI 150
            W+ A AV +W+SEKK YDY SN+C+ G+ CGHYTQVV   T RVGCA+VTC  G GVFI
Sbjct: 61  NWSAADAVASWVSEKKYYDYDSNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVFI 120

Query: 151 TCNYDPPGNYIGERPY 166
            CNYDPPGNYIG+RPY
Sbjct: 121 ICNYDPPGNYIGQRPY 136

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|214553 smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

 Score =  116 bits (293), Expect = 5e-34
 Identities = 48/146 (32%), Positives = 63/146 (43%), Gaps = 24/146 (16%)

Query: 31  ANQFLVPQNAAR-----------YALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNG- 78
             + L   N  R            A  M  + WD  LA  AQ +AN+    C   HS   
Sbjct: 3   QQEILDAHNKLRSQVAGGFLAAPAASNMLKLTWDCELASSAQNWANQ----CPFGHSTPR 58

Query: 79  -PYGENIFWGSGNG----WTPAQAVMAWISEKKSYDYWSNSC-SGGQQCGHYTQVVRSRT 132
             YGEN+ W S +        + AV  W  E + Y Y SN+C     + GHYTQVV ++T
Sbjct: 59  PGYGENLAWWSSSTALPDTYASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKT 118

Query: 133 RRVGCAKVTC--FGGRGVFITCNYDP 156
            +VGC    C     +   + CNYDP
Sbjct: 119 YKVGCGVANCPDGTKKKTVVVCNYDP 144

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function. Length = 144

>gnl|CDD|240184 cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

 Score =  114 bits (288), Expect = 2e-33
 Identities = 50/114 (43%), Positives = 62/114 (54%), Gaps = 5/114 (4%)

Query: 49  PMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSY 108
           P+ W+  LA YAQ YAN       L HS GPYGEN+  G  +      AV AW  E + Y
Sbjct: 21  PLTWNNTLAEYAQDYANSYDCSGNLAHSGGPYGENLAAGYPS---GTSAVDAWYDEIEDY 77

Query: 109 DYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIG 162
           DY  ++    +  GH+TQ+V   T +VGCA   C G  G +I C YDP GN IG
Sbjct: 78  DY--SNPGFSEATGHFTQLVWKSTTQVGCAYKDCGGAWGWYIVCEYDPAGNVIG 129

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune. Length = 129

>gnl|CDD|240180 cd05380, SCP_euk, SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

 Score =  106 bits (265), Expect = 7e-30
 Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 15/123 (12%)

Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGP----YGENIFWGSGNG----WTPA 95
           A  M  ++WD  LA  AQ +A      C  +HS        G+N+  GS  G        
Sbjct: 26  ASNMPKLKWDDELAALAQNWAKT----CVFEHSPCRNTGGVGQNLAAGSSTGSTVEELAE 81

Query: 96  QAVMAWISEKKSYDYWSNS-CSGGQQCGHYTQVVRSRTRRVGCAKVTC--FGGRGVFITC 152
            AV AW +E K Y + SN   +     GH+TQ+V ++T +VGCA   C   GG    + C
Sbjct: 82  DAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVC 141

Query: 153 NYD 155
           NY 
Sbjct: 142 NYS 144

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|238097 cd00168, SCP, SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

 Score =  104 bits (260), Expect = 2e-29
 Identities = 47/130 (36%), Positives = 61/130 (46%), Gaps = 13/130 (10%)

Query: 31  ANQFLVPQNAAR-YALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGP----YGENIF 85
           A + +   N+ R     M PM WD  LA+ AQ YAN     C  KHS        GEN+ 
Sbjct: 1   AQEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYAN----RCIFKHSGEDGRGFVGENLA 56

Query: 86  WGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGG 145
            GS +  T   AV AW +E K+Y++           GHYTQVV   T ++GC    C G 
Sbjct: 57  AGSYD-MTGPAAVQAWYNEIKNYNF--GQPGFSSGTGHYTQVVWKNTTKIGCGVAFC-GS 112

Query: 146 RGVFITCNYD 155
              ++ CNY 
Sbjct: 113 NSYYVVCNYG 122

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

>gnl|CDD|240182 cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

 Score = 98.1 bits (245), Expect = 6e-27
 Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 6/135 (4%)

Query: 29  SLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHS-NGPYGENIFWG 87
               + L   N  R      P++ D  LA+ AQ++A K     +L+HS    YGEN+ + 
Sbjct: 1   DFQKECLDAHNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYA 60

Query: 88  SGNGW--TPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGG 145
           SG+G   T  +AV +W +E K YD+     S     GH+TQVV   +  +G         
Sbjct: 61  SGSGPDLTGEEAVDSWYNEIKKYDFNKPGFSSK--TGHFTQVVWKSSTELGVGVAK-SKK 117

Query: 146 RGVFITCNYDPPGNY 160
             V++   Y P GN 
Sbjct: 118 GCVYVVARYRPAGNV 132

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms. Length = 132

>gnl|CDD|240186 cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

 Score = 98.0 bits (244), Expect = 8e-27
 Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 6/117 (5%)

Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWIS 103
           A  M  M WD  LA  A+ YA K  +D      +   GEN+F  +G  +   +AV  W +
Sbjct: 19  AANMLKMTWDEELAALAEAYARKCIWDHNPDRGHLRVGENLFISTGPPFDATKAVEDWNN 78

Query: 104 EKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGV------FITCNY 154
           EK  Y+Y +N+C+  + CGHYTQVV + T ++GC    C     +       + CNY
Sbjct: 79  EKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCETLEVLRWENATLLVCNY 135

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240185 cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

 Score = 92.4 bits (230), Expect = 1e-24
 Identities = 52/128 (40%), Positives = 68/128 (53%), Gaps = 24/128 (18%)

Query: 47  MRPMQWDPNLARYAQQYANKRRYDCELKH---SNGPY---------GENIFWGSGNGWTP 94
           MR M WD  LA+ A+ +A K    C+ KH       Y         GENI+ GS   ++P
Sbjct: 24  MRYMTWDAALAKTARAWAKK----CKFKHNIYLGKRYKCHPKFTSVGENIWLGSIYIFSP 79

Query: 95  AQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTC--FGGR---GVF 149
             AV +W +E K YD+ +NSCS    CGHYTQVV + + +VGCA   C   GG     +F
Sbjct: 80  KNAVTSWYNEGKFYDFDTNSCSR--VCGHYTQVVWATSYKVGCAVAFCPNLGGIPNAAIF 137

Query: 150 ITCNYDPP 157
           + CNY P 
Sbjct: 138 V-CNYAPA 144

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|215778 pfam00188, CAP, Cysteine-rich secretory protein family

 Score = 78.8 bits (194), Expect = 2e-19
 Identities = 39/121 (32%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 39  NAARYALR-MRPMQWDPNLARYAQQYANKRRYDCELKHSNGP-YGENIFWGSGNGWTPAQ 96
           N  R A     P+ WDP LA  AQ +A      C      G  YGEN+   S  G     
Sbjct: 5   NELRSAAGGAPPLSWDPTLAAAAQDHAA----YCADNGYFGHDYGENLALVSVAGKADDP 60

Query: 97  ---AVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCN 153
              AV  W  E K YD      +     GH T ++  ++ +VGCA   C  G   ++ CN
Sbjct: 61  GVAAVENWYDEAKDYDAAVGINAWMSSPGHRTNLLWPKSTKVGCAVAKCGDGSSYYVVCN 120

Query: 154 Y 154
           Y
Sbjct: 121 Y 121

This is a large family of cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) that are found in a wide range of organisms, including prokaryotes and non-vertebrate eukaryotes, The nine subfamilies of the mammalian CAP 'super'family include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins. Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP 'super'family results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences. The Ca++-chelating function would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine from Heloderma horridum horridum blocks the Ca++ transporting ryanodine receptors. Length = 121

>gnl|CDD|240183 cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

 Score = 63.5 bits (155), Expect = 1e-13
 Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 16/121 (13%)

Query: 47  MRPMQWDPNLARYAQQYANKRRYDCELKHSNGPY--------GENIFWGSG-NGWTPAQA 97
           M  M+W+   A+ A+++AN     C L HS            GENIF  S    W+    
Sbjct: 24  MLKMEWNEEAAQNAKKWANT----CNLTHSPPNGRTIGGITCGENIFMSSYPRSWS--DV 77

Query: 98  VMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGR-GVFITCNYDP 156
           + AW  E K + Y   +   G   GHYTQ+V  ++  VGCA   C   +   F  C+Y P
Sbjct: 78  IQAWYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYCP 137

Query: 157 P 157
            
Sbjct: 138 A 138

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. One member, DE or CRISP-1, has been shown to mediate gamete fusion by binding to the egg surface; a sequence motif in the SCP domain plays a role in that binding. Length = 138

>gnl|CDD|240179 cd05379, SCP_bacterial, SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 20/82 (24%)

Query: 39  NAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPY-----------------G 81
           NA R    + P+ WDP LA  AQ +A     +    H+                     G
Sbjct: 9   NAYRAQNGLPPLTWDPALAAAAQAHARDMAANGYFSHTGPDGSSPFDRARAAGYPYSSAG 68

Query: 82  ENIFWGSGNGWTPAQAVMAWIS 103
           ENI +G     T   AV  W++
Sbjct: 69  ENIAYGYS---TAEAAVDGWMN 87

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	166
cd05381	136	SCP_PR-1_like SCP_PR-1_like: SCP-like extracellula	100.0
cd05384	129	SCP_PRY1_like SCP_PRY1_like: SCP-like extracellula	100.0
cd05382	132	SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracel	100.0
cd05385	144	SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extrac	100.0
cd05383	138	SCP_CRISP SCP_CRISP: SCP-like extracellular protei	100.0
smart00198	144	SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extra	100.0
cd05559	136	SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular prot	100.0
KOG3017	225	consensus Defense-related protein containing SCP d	100.0
cd00168	122	SCP SCP: SCP-like extracellular protein domain, fo	100.0
cd05380	144	SCP_euk SCP_euk: SCP-like extracellular protein do	99.97
PF00188	124	CAP: Cysteine-rich secretory protein family; Inter	99.86
TIGR02909	127	spore_YkwD uncharacterized protein, YkwD family. M	99.82
cd05379	122	SCP_bacterial SCP_bacterial: SCP-like extracellula	99.68
COG2340	207	Uncharacterized protein with SCP/PR1 domains [Func	99.27
PF13956	19	Ibs_toxin: Toxin Ibs, type I toxin-antitoxin syste	92.55
PF08139	25	LPAM_1: Prokaryotic membrane lipoprotein lipid att	91.71
PRK09810	41	entericidin A; Provisional	91.01
PRK10598	186	lipoprotein; Provisional	84.94
TIGR03044	135	PS_II_psb27 photosystem II protein Psb27. Members	80.83

>cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

Probab=100.00  E-value=2.8e-42  Score=240.40  Aligned_cols=135  Identities=66%  Similarity=1.256  Sum_probs=123.9

Q ss_pred             HHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCCCCccceEEeccCCCCCHHHHHHHHHhhhccCCcC
Q 031070           32 NQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYW  111 (166)
Q Consensus        32 ~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~~~Gen~~~~~~~~~~~~~~v~~W~~e~~~y~~~  111 (166)
                      +.||+.||.+|+.++|++|+||++|++.||.||++++..|...|+.+.+|||+++.......+.++|+.|++|...|++.
T Consensus         2 ~~il~~hN~~R~~~~~~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~~~GeNi~~~~~~~~~~~~~v~~W~~e~~~y~~~   81 (136)
T cd05381           2 QDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSNGPYGENLFWGSGGNWSAADAVASWVSEKKYYDYD   81 (136)
T ss_pred             hHHHHHHHHHHHhcCCCcceECHHHHHHHHHHHHHhcCCCCcccCCCCCCceEEEecCCCCCHHHHHHHHHhccccCCCC
Confidence            58999999999999999999999999999999988888899988887899999987744567899999999999999998


Q ss_pred             CCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEecCCCCCCCCCCC
Q 031070          112 SNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY  166 (166)
Q Consensus       112 ~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  166 (166)
                      .+.+..+..++|||||||+++++||||++.|.++...++||+|+|+||+.|++||
T Consensus        82 ~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vvC~Y~p~gn~~g~~~Y  136 (136)
T cd05381          82 SNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVFIICNYDPPGNYIGQRPY  136 (136)
T ss_pred             CCCcCCCccchHHHHHHHHhcCEeceEEEEeCCCCcEEEEEEeeCCCCCCCCCCC
Confidence            8877766789999999999999999999999874358999999999999999998

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

Probab=100.00  E-value=5.2e-38  Score=216.98  Aligned_cols=129  Identities=43%  Similarity=0.747  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCCCCccceEEeccCCCCCHHHHHHHHHhhhccC
Q 031070           29 SLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSY  108 (166)
Q Consensus        29 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~~~Gen~~~~~~~~~~~~~~v~~W~~e~~~y  108 (166)
                      ++++.||+.||.+|+.++++||+||++|++.||.||.+++..|...|++..+|||++...   .++.++++.|++|...|
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~~L~w~~~La~~A~~~a~~c~~~~~~~~~~~~~geNi~~~~---~~~~~~v~~W~~e~~~y   77 (129)
T cd05384           1 SFASSILDAHNSKRALHGVQPLTWNNTLAEYAQDYANSYDCSGNLAHSGGPYGENLAAGY---PSGTSAVDAWYDEIEDY   77 (129)
T ss_pred             CHHHHHHHHHHHHHHHcCCCcCccCHHHHHHHHHHHHHhccCCceecCCCCCCcEEEEec---CCHHHHHHHHHhhhhhC
Confidence            368999999999999999999999999999999999777666668888888999998765   36889999999999999


Q ss_pred             CcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEecCCCCCCC
Q 031070          109 DYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIG  162 (166)
Q Consensus       109 ~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g  162 (166)
                      ++..+..  +..++||+||||+++++||||++.|+.....++||+|+|+||+.|
T Consensus        78 ~~~~~~~--~~~~~h~tqmvw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~Gn~~g  129 (129)
T cd05384          78 DYSNPGF--SEATGHFTQLVWKSTTQVGCAYKDCGGAWGWYIVCEYDPAGNVIG  129 (129)
T ss_pred             CCCCCCC--CCcccchhhhhhhccceeeeEEEEeCCCCeEEEEEEEECCCCCCc
Confidence            9977543  346899999999999999999999987435889999999999876

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune.

>cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

Probab=100.00  E-value=4.8e-37  Score=212.73  Aligned_cols=128  Identities=32%  Similarity=0.520  Sum_probs=113.0

Q ss_pred             HHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCCC-CccceEEeccC--CCCCHHHHHHHHHhhhc
Q 031070           30 LANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNG-PYGENIFWGSG--NGWTPAQAVMAWISEKK  106 (166)
Q Consensus        30 ~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-~~Gen~~~~~~--~~~~~~~~v~~W~~e~~  106 (166)
                      +++.||+.||.+|+.++|+||+||++|+..||.||++|+..+.+.|+.+ .+|||++....  ....+.++|+.|++|..
T Consensus         2 ~~~~iL~~hN~~R~~~g~~~L~wd~~La~~A~~~a~~c~~~~~~~h~~~~~~GeN~~~~~~~~~~~~~~~~v~~W~~e~~   81 (132)
T cd05382           2 FQKECLDAHNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYASGSGPDLTGEEAVDSWYNEIK   81 (132)
T ss_pred             HHHHHHHHHHHHHHHcCCCcCeeCHHHHHHHHHHHHHhhhcCceeCCCCCCCCceeEEecCCCCCCCHHHHHHHHHhccc
Confidence            6899999999999999999999999999999999977776666777765 59999998873  46688999999999999


Q ss_pred             cCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEecCCCCC
Q 031070          107 SYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNY  160 (166)
Q Consensus       107 ~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~  160 (166)
                      .|++..+..  +..++||+||||+++++||||++.|+.+ ..++||+|+|+||+
T Consensus        82 ~y~~~~~~~--~~~~gh~tqmvw~~t~~vGCa~~~~~~~-~~~~vC~Y~p~Gn~  132 (132)
T cd05382          82 KYDFNKPGF--SSKTGHFTQVVWKSSTELGVGVAKSKKG-CVYVVARYRPAGNV  132 (132)
T ss_pred             cCCCCCCCC--CCCCCCeEEeEecCCCceeeEEEEcCCC-CEEEEEEEeCCCCC
Confidence            999875443  3469999999999999999999999864 58999999999985

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms.

>cd05385 SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

Probab=100.00  E-value=3.7e-35  Score=206.38  Aligned_cols=123  Identities=40%  Similarity=0.724  Sum_probs=107.4

Q ss_pred             HHHHHHHHHHHHHHhhCC-----CCCCcccHHHHHHHHHHHHhhhcCCccccCC------------CCccceEEeccCCC
Q 031070           29 SLANQFLVPQNAARYALR-----MRPMQWDPNLARYAQQYANKRRYDCELKHSN------------GPYGENIFWGSGNG   91 (166)
Q Consensus        29 ~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~------------~~~Gen~~~~~~~~   91 (166)
                      +++++||+.||.+|+++.     |.+|+||++|++.||.||    ++|...|++            ..+|||++....+.
T Consensus         1 ~f~~~~L~~HN~~R~~~~p~a~~m~~l~Wd~~La~~Aq~~a----~~C~~~~~~~~~~~~~~~~~~~~~GeNi~~~~~~~   76 (144)
T cd05385           1 EFIDECVRIHNELRSKVSPPAANMRYMTWDAALAKTARAWA----KKCKFKHNIYLGKRYKCHPKFTSVGENIWLGSIYI   76 (144)
T ss_pred             CHHHHHHHHHHHHHhhCCCCcccCcccccCHHHHHHHHHHH----hcCCCCCCchhhcccccccccCcccceeeecccCC
Confidence            478999999999999994     899999999999999999    889887764            25899998876555


Q ss_pred             CCHHHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCC----CeEEEEEEecCC
Q 031070           92 WTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGG----RGVFITCNYDPP  157 (166)
Q Consensus        92 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~----~~~~~vC~Y~p~  157 (166)
                      ..+.++++.|++|..+|+|..+.+.  ..++|||||||+++++||||++.|+.+    ...++||+|+|+
T Consensus        77 ~~~~~av~~W~~e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCa~~~c~~~~~~~~~~~vVC~Y~p~  144 (144)
T cd05385          77 FSPKNAVTSWYNEGKFYDFDTNSCS--RVCGHYTQVVWATSYKVGCAVAFCPNLGGIPNAAIFVCNYAPA  144 (144)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCCC--CcccCHHHHHHhhccccceEEEECCCCCCccccEEEEEeCCCC
Confidence            6889999999999999999877654  369999999999999999999999875    246899999984

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05383 SCP_CRISP SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

Probab=100.00  E-value=4.2e-35  Score=204.74  Aligned_cols=123  Identities=32%  Similarity=0.575  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHhhCC-----CCCCcccHHHHHHHHHHHHhhhcCCccccCCC--------CccceEEeccCCCCCHHH
Q 031070           30 LANQFLVPQNAARYALR-----MRPMQWDPNLARYAQQYANKRRYDCELKHSNG--------PYGENIFWGSGNGWTPAQ   96 (166)
Q Consensus        30 ~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~--------~~Gen~~~~~~~~~~~~~   96 (166)
                      .|+.||+.||.+|+.+.     |.+|+||++||..||.||    ++|...|++.        .+|||++... ....+.+
T Consensus         2 ~~~~il~~HN~~R~~~~p~a~~M~~l~Wd~~La~~A~~~a----~~C~~~~~~~~~~~~~~~~~GeNl~~~~-~~~~~~~   76 (138)
T cd05383           2 VQKEIVDLHNELRRSVNPTASNMLKMEWNEEAAQNAKKWA----NTCNLTHSPPNGRTIGGITCGENIFMSS-YPRSWSD   76 (138)
T ss_pred             HHHHHHHHHHHHhccCCCCcccCcccEeCHHHHHHHHHHH----hcCCCcCCchhhcccCCCCcceeeeccC-CCCCHHH
Confidence            47899999999999985     678999999999999999    9998878752        4799999776 3457889


Q ss_pred             HHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCC-CeEEEEEEecCC
Q 031070           97 AVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGG-RGVFITCNYDPP  157 (166)
Q Consensus        97 ~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~-~~~~~vC~Y~p~  157 (166)
                      +|+.|++|...|+|+.+.+..+..++|||||||+++++||||++.|..+ ...++||+|+|+
T Consensus        77 av~~W~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~vC~Y~P~  138 (138)
T cd05383          77 VIQAWYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYCPA  138 (138)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCCCchhhHHHHHHHhccccceEEEECCCCCcCEEEEEecCCC
Confidence            9999999999999988776667789999999999999999999999875 358899999985

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ t

>smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

Probab=100.00  E-value=5.3e-35  Score=205.26  Aligned_cols=124  Identities=39%  Similarity=0.703  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHHHHhhCC-----------CCCCcccHHHHHHHHHHHHhhhcCCccccCCC-CccceEEeccC----CCCC
Q 031070           30 LANQFLVPQNAARYALR-----------MRPMQWDPNLARYAQQYANKRRYDCELKHSNG-PYGENIFWGSG----NGWT   93 (166)
Q Consensus        30 ~~~~il~~hN~~R~~~~-----------m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-~~Gen~~~~~~----~~~~   93 (166)
                      +|+.||+.||.+|+.++           |++|+||++||..|+.||    +.|...|+.. .+|||+++...    ....
T Consensus         2 ~~~~iL~~HN~~R~~~a~G~~~~p~a~~m~~l~Wd~~La~~A~~~a----~~C~~~~~~~~~~GeNi~~~~~~~~~~~~~   77 (144)
T smart00198        2 QQQEILDAHNKLRSQVAKGLLANPAASNMLKLTWDCELASSAQNWA----NQCPFGHSTPRGYGENLAWWSSSTDLPITY   77 (144)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccccccccCCHHHHHHHHHHH----HhCCCcCCCcCCcCcceEEecccCcccchh
Confidence            58899999999999999           999999999999999999    8998888763 78999998763    3457


Q ss_pred             HHHHHHHHHhhhccCCcCCCCCCC-CcccchHHHHHHhcCCeEEEEEEEeCCC--CeEEEEEEecCC
Q 031070           94 PAQAVMAWISEKKSYDYWSNSCSG-GQQCGHYTQVVRSRTRRVGCAKVTCFGG--RGVFITCNYDPP  157 (166)
Q Consensus        94 ~~~~v~~W~~e~~~y~~~~~~~~~-~~~~~~f~qmiw~~~~~vGCa~~~c~~~--~~~~~vC~Y~p~  157 (166)
                      +.++|+.|++|...|++..+.+.. +..++|||||||+++++||||++.|.++  ...++||+|+|+
T Consensus        78 ~~~av~~W~~e~~~y~~~~~~~~~~~~~~~hftqmvw~~s~~vGCa~~~c~~~~~~~~~~vC~Y~P~  144 (144)
T smart00198       78 ASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKTYKVGCGVSNCPDGTKKKTVVVCNYDPP  144 (144)
T ss_pred             HHHHHHHHHHHHHHcCCCCCccccCccchhHHHHHHHHhcCCcceEEEECCCCCcceEEEEEecCCC
Confidence            889999999999999998877664 5679999999999999999999999886  236999999985

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.

>cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

Probab=100.00  E-value=4.4e-34  Score=199.09  Aligned_cols=121  Identities=35%  Similarity=0.667  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHHHhhCC-----CCCCcccHHHHHHHHHHHHhhhcCCccccCCC----CccceEEeccCCCCCHHHHHHHH
Q 031070           31 ANQFLVPQNAARYALR-----MRPMQWDPNLARYAQQYANKRRYDCELKHSNG----PYGENIFWGSGNGWTPAQAVMAW  101 (166)
Q Consensus        31 ~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~----~~Gen~~~~~~~~~~~~~~v~~W  101 (166)
                      |+.||+.||.+|+.++     |.+|+||++||..||.||    ++|...|++.    .+|||++...++...+.++++.|
T Consensus         1 r~~il~~HN~~R~~~~p~a~~m~~L~Wd~~La~~A~~~a----~~C~~~~~~~~~~~~~GeNl~~~~~~~~~~~~~v~~W   76 (136)
T cd05559           1 RLNLVDLHNQYRSQVSPPAANMLKMTWDEELAALAEAYA----RKCIWDHNPDRGHLRVGENLFISTGPPFDATKAVEDW   76 (136)
T ss_pred             CcHHHHHHHHHHhhCCCccccCcccccCHHHHHHHHHHH----HhccccCCCcccCCCceeeeeecCCCCCCHHHHHHHH
Confidence            4689999999999986     778999999999999999    8998888662    68999998775566799999999


Q ss_pred             HhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCC------CeEEEEEEec
Q 031070          102 ISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGG------RGVFITCNYD  155 (166)
Q Consensus       102 ~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~------~~~~~vC~Y~  155 (166)
                      ++|...|+|..+.+..+..++||+||||+++++||||++.|++.      ...++||+|+
T Consensus        77 ~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~~~~~~vC~Y~  136 (136)
T cd05559          77 NNEKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCETLEVLRWENATLLVCNYG  136 (136)
T ss_pred             HHHHHhcCCCCCCCCCCCcccchHHHHHhccCccceEEEECCCCCCCCcccCEEEEecCC
Confidence            99999999988877777789999999999999999999999753      2478999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>KOG3017 consensus Defense-related protein containing SCP domain [Function unknown]

Probab=100.00  E-value=2e-33  Score=210.85  Aligned_cols=137  Identities=46%  Similarity=0.818  Sum_probs=119.8

Q ss_pred             CChHHHHHHHHHHHHHHhhCC-----CCCCcccHHHHHHHHHHHHhhhcCCccccC------CCCccceEEeccCCC---
Q 031070           26 NYWSLANQFLVPQNAARYALR-----MRPMQWDPNLARYAQQYANKRRYDCELKHS------NGPYGENIFWGSGNG---   91 (166)
Q Consensus        26 ~~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~------~~~~Gen~~~~~~~~---   91 (166)
                      ...+++++|++.||.+|..+.     |.+|+||++||..||.||    ++|...|+      ...+|||++++....   
T Consensus        37 ~~~~~~~~~~~~hn~~r~~~~~~as~m~~m~Wd~~La~~Aq~~a----~~c~~~~~~~~~~~~~~~GeNl~~~~~~~~~~  112 (225)
T KOG3017|consen   37 AHNNLRSEILNGHNVARGAVGPPASNMMKLKWDDELAALAQNWA----NTCPFGHDKCVHTSFGPYGENLAWGWSSNPPL  112 (225)
T ss_pred             hcHHHHHHHHhhhHHhcCccCCchHhCccccCCHHHHHHHHHHH----hhCCcccCccccccCCCCcccceeeccCCCCc
Confidence            456899999999999999999     999999999999999999    88887666      357799999887431   


Q ss_pred             ---CCHHHHHHHHHhhhccCCcCCCCCCC---CcccchHHHHHHhcCCeEEEEEEEeCCCC----eEEEEEEecCCCCCC
Q 031070           92 ---WTPAQAVMAWISEKKSYDYWSNSCSG---GQQCGHYTQVVRSRTRRVGCAKVTCFGGR----GVFITCNYDPPGNYI  161 (166)
Q Consensus        92 ---~~~~~~v~~W~~e~~~y~~~~~~~~~---~~~~~~f~qmiw~~~~~vGCa~~~c~~~~----~~~~vC~Y~p~gn~~  161 (166)
                         .....+++.|+.|...|++..+.+..   +..++|||||||+++++||||++.|.++.    ..++||+|+|+||..
T Consensus       113 ~~~~~~~~a~~~w~~e~~~~~~~~~~~~~~~~~~~~gHyTQ~vw~~s~~vGCgv~~c~~~~~~~~~~~~vC~Y~p~g~~~  192 (225)
T KOG3017|consen  113 SLDTSGALAVEAWESEFQEYDWSSNTCSSADFGEGIGHYTQMVWAKSTKVGCGVVRCGNGSNGYNTVAVVCNYDPPGNNI  192 (225)
T ss_pred             cccccHHHHHHHHHHHHHHccCcccccCcccCCCcceEEEEEEEeCCceeceeeccCCCCCCCcceEEEEEEeecCCCCc
Confidence               46777999999999999999998875   67899999999999999999999999874    689999999996555


Q ss_pred             C-CCCC
Q 031070          162 G-ERPY  166 (166)
Q Consensus       162 g-~~~Y  166 (166)
                      + +.+|
T Consensus       193 ~~~~~y  198 (225)
T KOG3017|consen  193 NGEIPY  198 (225)
T ss_pred             CCCCcC
Confidence            5 5665

>cd00168 SCP SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

Probab=100.00  E-value=9.6e-33  Score=188.81  Aligned_cols=116  Identities=38%  Similarity=0.649  Sum_probs=103.2

Q ss_pred             HHHHHHHHHHHhhC-CCCCCcccHHHHHHHHHHHHhhhcCCccccCCC----CccceEEeccCCCCCHHHHHHHHHhhhc
Q 031070           32 NQFLVPQNAARYAL-RMRPMQWDPNLARYAQQYANKRRYDCELKHSNG----PYGENIFWGSGNGWTPAQAVMAWISEKK  106 (166)
Q Consensus        32 ~~il~~hN~~R~~~-~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~----~~Gen~~~~~~~~~~~~~~v~~W~~e~~  106 (166)
                      +.||+.||.+|+.+ +|+||+||++|+..||.||    ++|...|++.    .+|||++....+ .++.++++.|++|..
T Consensus         2 ~~il~~hN~~R~~~a~~~~L~wd~~La~~A~~~a----~~c~~~h~~~~~~~~~geNi~~~~~~-~~~~~~v~~W~~e~~   76 (122)
T cd00168           2 QEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYA----NRCIFKHSGEDGRGFVGENLAAGSYD-MTGPAAVQAWYNEIK   76 (122)
T ss_pred             cHHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHH----hhccccCCCcccCCCCCceeEEecCC-CCHHHHHHHHHHHHH
Confidence            57999999999999 9999999999999999999    8998888764    689999988733 689999999999999


Q ss_pred             cCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEec
Q 031070          107 SYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYD  155 (166)
Q Consensus       107 ~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y~  155 (166)
                      .|+|..+..  +..++||+||||+++++||||++.|+++ ..++||+|+
T Consensus        77 ~y~~~~~~~--~~~~~h~~qmvw~~s~~vGca~~~~~~~-~~~~vC~Y~  122 (122)
T cd00168          77 NYNFGQPGF--SSGTGHYTQVVWKNTTKIGCGVAFCGSN-SYYVVCNYG  122 (122)
T ss_pred             hCCCCCCCC--CCCccchhhhhcccCCeeeeEEEEcCCC-CEEEEEeCc
Confidence            999985443  3568999999999999999999999864 589999995

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as

>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

Probab=99.97  E-value=6e-32  Score=189.22  Aligned_cols=121  Identities=34%  Similarity=0.565  Sum_probs=105.1

Q ss_pred             HHHHHHHHHHHHhhC------------CCCCCcccHHHHHHHHHHHHhhhcCCccccCCC----CccceEEeccCC----
Q 031070           31 ANQFLVPQNAARYAL------------RMRPMQWDPNLARYAQQYANKRRYDCELKHSNG----PYGENIFWGSGN----   90 (166)
Q Consensus        31 ~~~il~~hN~~R~~~------------~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~----~~Gen~~~~~~~----   90 (166)
                      ++.||+.||.+|+.+            .|.+|+||++||+.|+.||    ++|...|+..    .+|||++.....    
T Consensus         1 ~~~il~~HN~~R~~~a~g~~~~~p~a~~m~~l~Wd~~La~~A~~~a----~~C~~~~~~~~~~~~~GeNl~~~~~~~~~~   76 (144)
T cd05380           1 RQAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALAQNWA----KTCVFEHSPCRNTGGVGQNLAAGSSTGSTV   76 (144)
T ss_pred             CcHHHHHHHHHHHHhhcCCCCCCCchhcCCcceeCHHHHHHHHHHH----hcCCCcCCcccCCCCCCcEEEEeccCCCCH
Confidence            468999999999999            6999999999999999999    9998778764    689999988733    


Q ss_pred             CCCHHHHHHHHHhhhccCCcCCC-CCCCCcccchHHHHHHhcCCeEEEEEEEeCCC--CeEEEEEEec
Q 031070           91 GWTPAQAVMAWISEKKSYDYWSN-SCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGG--RGVFITCNYD  155 (166)
Q Consensus        91 ~~~~~~~v~~W~~e~~~y~~~~~-~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~--~~~~~vC~Y~  155 (166)
                      ...+.++|+.|++|...|++... .+..+..++||+||||+++++||||++.|...  ...++||+|+
T Consensus        77 ~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~~~~~~~~~~~~vC~Y~  144 (144)
T cd05380          77 EELAEDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVCNYS  144 (144)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcCcccccccchhHHHHHHHHhcCccceEEEEeecCCceEEEEEecCC
Confidence            23688999999999999999875 34456779999999999999999999999863  4699999995

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>PF00188 CAP: Cysteine-rich secretory protein family; InterPro: IPR014044 The cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) superfamily proteins are found in a wide range of organisms, including prokaryotes [] and non-vertebrate eukaryotes [], The nine subfamilies of the mammalian CAP superfamily include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins

Probab=99.86  E-value=2e-21  Score=130.26  Aligned_cols=116  Identities=35%  Similarity=0.523  Sum_probs=82.7

Q ss_pred             HHHHHHHH-hhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCC-CCccceEEeccCCCCCH---HHHHHHHHhhhccCC
Q 031070           35 LVPQNAAR-YALRMRPMQWDPNLARYAQQYANKRRYDCELKHSN-GPYGENIFWGSGNGWTP---AQAVMAWISEKKSYD  109 (166)
Q Consensus        35 l~~hN~~R-~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~-~~~Gen~~~~~~~~~~~---~~~v~~W~~e~~~y~  109 (166)
                      |+.||++| ...++++|+||++|++.|+.+|    +.|...... ...|++...........   ...++.|+.+...+.
T Consensus         1 L~~~N~~R~~~~~~~~L~~d~~L~~~A~~~a----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (124)
T PF00188_consen    1 LDLHNEYRSAANGLPPLKWDPELAKAAQAHA----KYCANSNSLSHDSGENGSQSSRFGSYSDAQVTAVENWYSESKNYN   76 (124)
T ss_dssp             HHHHHHHHHBSSTBB--EE-HHHHHHHHHHH----TTTCSSEETTEESEEEEEEESSTTSHHHHHHHHHHHHHGGGGGEE
T ss_pred             CHHHHHHHHHhCCCCCCeeCHHHHHHHHHhh----HHhhhhcccccccCCCCccccccccccchhhHHHHHHHhcccccc
Confidence            78999999 8888888999999999999999    667652222 24577777665222211   112999999999988


Q ss_pred             cCC--CCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCe-EEEEEEe
Q 031070          110 YWS--NSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRG-VFITCNY  154 (166)
Q Consensus       110 ~~~--~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~-~~~vC~Y  154 (166)
                      ...  ........++||+||+|+++++||||+..|..+.. .++||.|
T Consensus        77 ~~~~~~~~~~~~~~~h~~~ll~~~~~~iGca~~~~~~~~~~~~~vc~y  124 (124)
T PF00188_consen   77 FQNQSIFNSWMNSPGHFTNLLWPNTTRIGCAVANCPNGKNNYYWVCNY  124 (124)
T ss_dssp             TTCSTEESSTTSTCHHHHHHT-TT--EEEEEEEEETTSSSEEEEEEEE
T ss_pred             cccchhhhccCCchhhhhhhhcCCCCEEEEEEEEeCCCCeeEEEEEEC
Confidence            772  12222456899999999999999999999998733 9999998

Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP superfamily results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences []. The Ca++-chelating function [] would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how Q91055 from SWISSPROT blocks the Ca++ transporting ryanodine receptors. This entry represents the CAP domain common to all members of the CAP superfamily. The CAP domain forms a unique 3 layer alpha-beta-alpha fold with some, though not all, of the structural elements found in proteases [].; PDB: 3U3N_C 3U3U_C 3U3L_C 1U53_A 1RC9_A 1SMB_A 3NT8_B 1QNX_A 1WVR_A 3Q2U_A ....

>TIGR02909 spore_YkwD uncharacterized protein, YkwD family

Probab=99.82  E-value=3.9e-19  Score=122.39  Aligned_cols=106  Identities=24%  Similarity=0.375  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCCC-----------------CccceEEeccCCC
Q 031070           29 SLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNG-----------------PYGENIFWGSGNG   91 (166)
Q Consensus        29 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-----------------~~Gen~~~~~~~~   91 (166)
                      ++++++|+.||.+|.+++++||.||+.|++.|+.||++|+..+.+.|..+                 .+|||++.+.   
T Consensus         3 ~~e~~~l~~iN~~R~~~Gl~pL~~~~~L~~~A~~hA~~ma~~~~~~H~~~~~~~~~~r~~~~g~~~~~~gENi~~g~---   79 (127)
T TIGR02909         3 AEEKRVVELVNAERAKNGLKPLKADPELSKVARLKSEDMRDKNYFSHTSPTYGSPFDMMKKFGISYRMAGENIAYGN---   79 (127)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHHhCCcccccCCCCCCHHHHHHHcCCCcccceeeeeccC---
Confidence            56789999999999999999999999999999999999998888888742                 3489998655   


Q ss_pred             CCHHHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEe
Q 031070           92 WTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNY  154 (166)
Q Consensus        92 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y  154 (166)
                      .++..+++.|+++                .+|+.+|+|++.+++|||++.++++ ..|+|-.|
T Consensus        80 ~~~~~~v~~W~~S----------------~gH~~nil~~~~~~~Gvg~~~~~~g-~~y~~q~F  125 (127)
T TIGR02909        80 STVEAVHNAWMNS----------------PGHRANILNPNYTEIGVGYVEGGSG-GIYWTQMF  125 (127)
T ss_pred             CCHHHHHHHHHcC----------------HhHHHHHcCCCcCeEeEEEEeCCCC-CeEEEEEe
Confidence            4788999999853                5799999999999999999998776 45555544

Members of this protein family represent a subset of those belonging to Pfam family pfam00188 (SCP-like extracellular protein). Based on currently cuttoffs for this model, all member proteins are found in Bacteria capable of endospore formation. Members include a named but uncharacterized protein, YkwD of Bacillus subtilis. Only the C-terminal region is well-conserved and is included in the seed alignment for this model. Three members of this family have an N-terminal domain homologous to the spore coat assembly protein SafA.

>cd05379 SCP_bacterial SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

Probab=99.68  E-value=7.3e-16  Score=104.45  Aligned_cols=103  Identities=28%  Similarity=0.393  Sum_probs=86.0

Q ss_pred             HHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCCC-----------------CccceEEeccCCCCCH
Q 031070           32 NQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNG-----------------PYGENIFWGSGNGWTP   94 (166)
Q Consensus        32 ~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-----------------~~Gen~~~~~~~~~~~   94 (166)
                      +.+++.+|.+|..++++||+||++|+..|+.+|++|+......|.+.                 .+|||++...   ..+
T Consensus         2 ~~~~~~iN~~R~~~gl~pl~~~~~l~~~A~~~a~~~~~~~~~~h~~~~~~~~~~~~~~~g~~~~~~~eni~~~~---~~~   78 (122)
T cd05379           2 QEALELINAYRAQNGLPPLTWDPALAAAAQAHARDMAANGYFSHTGPDGSSPFDRARAAGYPYSSAGENIAYGY---STA   78 (122)
T ss_pred             hHHHHHHHHHHHHcCCCCCccChHHHHHHHHHHHHHHhcCccCCcCCCCCCHHHHHHHcCCCcCccchhhcccC---CCH
Confidence            57899999999999999999999999999999999986666666652                 1388887665   278


Q ss_pred             HHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEe
Q 031070           95 AQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNY  154 (166)
Q Consensus        95 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y  154 (166)
                      .++++.|+++                .+|+.+|+++..+++|||+....++ ..++|..|
T Consensus        79 ~~~~~~w~~~----------------~~H~~~ll~~~~~~~Gvg~~~~~~~-~~y~~~~f  121 (122)
T cd05379          79 EAAVDGWMNS----------------PGHRANILNPDYTEVGVGVAYGGDG-GYYWVQVF  121 (122)
T ss_pred             HHHHHHHhCC----------------HhHHHHHcCCCcceeeEEEEeCCCC-CeEEEEec
Confidence            8999999743                5799999999999999999998865 45666554

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains.

>COG2340 Uncharacterized protein with SCP/PR1 domains [Function unknown]

Probab=99.27  E-value=3.2e-11  Score=89.55  Aligned_cols=99  Identities=22%  Similarity=0.375  Sum_probs=85.1

Q ss_pred             ChHHHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCCC-----------------CccceEEeccC
Q 031070           27 YWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNG-----------------PYGENIFWGSG   89 (166)
Q Consensus        27 ~~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-----------------~~Gen~~~~~~   89 (166)
                      ..++.+.+++.+|++|..+++++|.||.+|+..|+.++..|+....+.|..+                 .+||||+.+. 
T Consensus        77 ~~~~~~~~~~~~N~~R~~~~l~~L~~n~~L~~~A~~~a~~m~~~g~~sH~~~~g~~~~~r~~~~g~~~~~agENIa~g~-  155 (207)
T COG2340          77 LAQFEKAVVAETNQERAKHGLPPLAWNATLAKAARNHARDMAKNGYFSHTSPTGETPADRLKKYGISGATAGENIAYGS-  155 (207)
T ss_pred             cchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHHHHHcCCccccCCCCCCHHHHHHhCCcccccccceeecCC-
Confidence            4578889999999999999999999999999999999999998888888762                 4799999886 


Q ss_pred             CCCCH-HHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCC
Q 031070           90 NGWTP-AQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFG  144 (166)
Q Consensus        90 ~~~~~-~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~  144 (166)
                        .+. ..+++.|.+                ..||-.+|+-.+.+.+|.|+..-..
T Consensus       156 --~~~~~~~v~~Wl~----------------S~gH~~nll~~~~~~~Gv~~~~~~~  193 (207)
T COG2340         156 --NDPPEAAVDGWLN----------------SPGHRKNLLNPAYTEIGVGVAYDAS  193 (207)
T ss_pred             --CCchHHHHHHhcC----------------ChhhhhhccCcchhheeEEEEecCC
Confidence              233 799999963                3578899999999999999998544

>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system

Probab=92.55  E-value=0.062  Score=23.58  Aligned_cols=10  Identities=40%  Similarity=0.468  Sum_probs=7.2

Q ss_pred             CchhHHHHHH
Q 031070            1 MSKLILATVG   10 (166)
Q Consensus         1 ~m~~~l~l~~   10 (166)
                      |||+.++|++
T Consensus         1 MMk~vIIlvv   10 (19)
T PF13956_consen    1 MMKLVIILVV   10 (19)
T ss_pred             CceehHHHHH
Confidence            8997776663

>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II)

Probab=91.71  E-value=0.13  Score=24.74  Aligned_cols=18  Identities=33%  Similarity=0.351  Sum_probs=10.7

Q ss_pred             CchhHHHHHHHHHHHhhh
Q 031070            1 MSKLILATVGILLLLISS   18 (166)
Q Consensus         1 ~m~~~l~l~~~~~~~~~~   18 (166)
                      |||.++.+++.++.+..+
T Consensus         6 mmKkil~~l~a~~~LagC   23 (25)
T PF08139_consen    6 MMKKILFPLLALFMLAGC   23 (25)
T ss_pred             HHHHHHHHHHHHHHHhhc
Confidence            578887777444444443

The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].

>PRK09810 entericidin A; Provisional

Probab=91.01  E-value=0.27  Score=26.69  Aligned_cols=22  Identities=23%  Similarity=0.301  Sum_probs=14.2

Q ss_pred             CchhHHHHHHHHHHHhhhhhcc
Q 031070            1 MSKLILATVGILLLLISSSNAS   22 (166)
Q Consensus         1 ~m~~~l~l~~~~~~~~~~~~~~   22 (166)
                      |||.++++++++++.+..++..
T Consensus         1 mMkk~~~l~~~~~~~L~aCNTv   22 (41)
T PRK09810          1 MMKRLIVLVLLASTLLTGCNTA   22 (41)
T ss_pred             ChHHHHHHHHHHHHHHhhhhhc
Confidence            8998777775555555555554

>PRK10598 lipoprotein; Provisional

Probab=84.94  E-value=2  Score=31.43  Aligned_cols=47  Identities=15%  Similarity=0.081  Sum_probs=29.7

Q ss_pred             chhHHHHHHHHHHHhhhhhcc--CCCCChHHHHHHHHHHHHHHhhCCCC
Q 031070            2 SKLILATVGILLLLISSSNAS--SNSNYWSLANQFLVPQNAARYALRMR   48 (166)
Q Consensus         2 m~~~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~il~~hN~~R~~~~m~   48 (166)
                      ||.+++.++++++++.+.+++  ..+.|+.+.+.-|..|+.+-.+.+.+
T Consensus         1 mk~~~~~~~~~~~~llsGC~sl~~ysISE~Ein~yL~k~~~~~k~~G~~   49 (186)
T PRK10598          1 MKKFLFAAALLVSGLLVGCNQLTQYTISEQEINQYLAKHNNFEKQIGLP   49 (186)
T ss_pred             CchHHHHHHHHHHHHHhcccccCceeecHHHHHHHHHHhccHHHhcCCC
Confidence            555543333333333322333  34678999999999999999999843

>TIGR03044 PS_II_psb27 photosystem II protein Psb27

Probab=80.83  E-value=5.3  Score=27.58  Aligned_cols=40  Identities=20%  Similarity=0.146  Sum_probs=30.7

Q ss_pred             HHHHHhhhhhccCCCCChHHHHHHHHHHHHHHhhCCCCCC
Q 031070           11 ILLLLISSSNASSNSNYWSLANQFLVPQNAARYALRMRPM   50 (166)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~il~~hN~~R~~~~m~~L   50 (166)
                      +++++..|+.++....+.+..++-+...+.+|....+++=
T Consensus        18 ~~l~l~~c~~~~~~~Ltg~Y~~DT~~Vi~tlr~~i~lpkd   57 (135)
T TIGR03044        18 LCLLLTACSGAAKTRLTGDYVEDTLAVIQTLREAIDLPDD   57 (135)
T ss_pred             HHHHHhcccCCCcccccchHHHHHHHHHHHHHHHHcCCCC
Confidence            4445555555666677899999999999999999998543

Members of this family are the Psb27 protein of the cyanobacterial photosynthetic supracomplex, photosystem II. Although most protein components of both cyanobacterial and chloroplast versions of photosystem II are closely related and described together by single model families, this family is strictly bacterial. Some uncharacterized proteins with highly divergent sequences, from Arabidopsis, score between trusted and noise cutoffs for this model but are not at this time assigned as functionally equivalent photosystem II proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	166
1cfe_A	135	P14a, Nmr, 20 Structures Length = 135		8e-28
3q2r_A	205	Crystal Structure Of Sglipr1 Soaked With Zinc Chlor		6e-12
2vzn_A	218	Crystal Structure Of The Major Allergen From Fire A		5e-11
1smb_A	154	Crystal Structure Of Golgi-Associated Pr-1 Protein		1e-09
4aiw_A	154	Gapr-1 With Bound Inositol Hexakisphosphate Length		3e-09
1xta_A	221	Crystal Structure Of Natrin, A Snake Venom Crisp Fr		3e-08
1xx5_A	221	Crystal Structure Of Natrin From Naja Atra Snake Ve		4e-08
1u53_A	196	Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein F		5e-08
1wvr_A	221	Crystal Structure Of A Crisp Family Ca-Channel Bloc		1e-07
2dda_A	211	Crystal Structure Of Pseudechetoxin From Pseudechis		1e-07
2ddb_A	210	Crystal Structure Of Pseudecin From Pseudechis Porp		2e-07
1rc9_A	221	Crystal Structure Of Stecrisp, A Member Of Crisp Fa		3e-07
1qnx_A	209	Ves V 5, An Allergen From Vespula Vulgaris Venom Le		4e-07
3nt8_A	424	Crystal Structure Of Na-Asp-1 Length = 424		4e-06

>pdb|1CFE|A Chain A, P14a, Nmr, 20 Structures Length = 135

Iteration: 1
 Score =  119 bits (298), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 33  QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGW 92
            +L   N AR  + + PM WD NLA  AQ YAN R  DC L HS    GEN+  G G+ +
Sbjct: 6   DYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKGGGD-F 62
Query: 93  TPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITC 152
           T   AV  W+SE+ SY+Y +N C GG++C HYTQVV   + R+GC +  C  G   FI+C
Sbjct: 63  TGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGW-WFISC 121
Query: 153 NYDPPGNYIGERP 165
           NYDP GN+IG+RP
Sbjct: 122 NYDPVGNWIGQRP 134

>pdb|3Q2R|A Chain A, Crystal Structure Of Sglipr1 Soaked With Zinc Chloride Length = 205

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 25/136 (18%)
Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSN------------GPYGENIFWGSGNG 91
           A  M  M WDP LA+ A+ +A+    +C+  H+                GENI+ GS   
Sbjct: 37  ASDMLYMTWDPALAQIAKAWAS----NCQFSHNTRLKPPHKLHPNFTSLGENIWTGSVPI 92
Query: 92  WTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCA-----KVTCFGG- 145
           ++ + A+  W  E + YD+ +  C   + CGHYTQVV + + +VGCA     KV+ F   
Sbjct: 93  FSVSSAITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDAL 150
Query: 146 -RGVFITCNYDPPGNY 160
             G    CNY P GNY
Sbjct: 151 SNGAHFICNYGPGGNY 166

>pdb|2VZN|A Chain A, Crystal Structure Of The Major Allergen From Fire Ant Venom, Sol I 3 Length = 218

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 21/140 (15%)
Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHS------NGPYGENIFWGSGNG---WTP 94
           A++M  + WDP LA  AQ++AN+    C  +H           G+NI   S +G    TP
Sbjct: 73  AVKMPNLTWDPELATIAQRWANQ----CTFEHDACRNVERFAVGQNIAATSSSGKNKSTP 128
Query: 95  AQAVMAWISEKKSYDY-WSNSCSGGQ----QCGHYTQVVRSRTRRVGCAKVTCFGGRG-- 147
            + ++ W +E K +D  W +S         + GHYTQ+V ++T ++GC ++         
Sbjct: 129 NEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWT 188
Query: 148 -VFITCNYDPPGNYIGERPY 166
             ++ CNY P GN +G   Y
Sbjct: 189 KHYLVCNYGPAGNVLGAPIY 208

>pdb|1SMB|A Chain A, Crystal Structure Of Golgi-Associated Pr-1 Protein Length = 154

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 33  QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKH----SNGPYGENIFWGS 88
           + L   N  R    + P++   NL R AQQY+        LKH    S G  GEN+ W S
Sbjct: 12  EVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQXGENLAWAS 71
Query: 89  GNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGV 148
            +  T  +    W SE K+Y++     + G   GH+T +V   T+++G  K +   G   
Sbjct: 72  YD-QTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSS- 127
Query: 149 FITCNYDPPGNYIGE 163
           F+   Y P GN + E
Sbjct: 128 FVVARYFPAGNVVNE 142

>pdb|4AIW|A Chain A, Gapr-1 With Bound Inositol Hexakisphosphate Length = 154

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 33  QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKH----SNGPYGENIFWGS 88
           + L   N  R    + P++   NL R AQQY+        LKH    S G  GEN+ W S
Sbjct: 12  EVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS 71
Query: 89  GNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGV 148
            +  T  +    W SE K+Y++     + G   GH+T +V   T+++G  K +   G   
Sbjct: 72  YD-QTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSS- 127
Query: 149 FITCNYDPPGNYIGE 163
           F+   Y P GN + E
Sbjct: 128 FVVARYFPAGNVVNE 142

>pdb|1XTA|A Chain A, Crystal Structure Of Natrin, A Snake Venom Crisp From Taiwan Cobra (Naja Atra) Length = 221

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPY--------GENIFWGSGNGWTPA 95
           A  M  M+W P  A  A+++AN     C L HS            GE+I+  S N  T  
Sbjct: 33  ASNMLKMEWYPEAASNAERWANT----CSLNHSPDNLRVLEGIQCGESIYMSS-NARTWT 87
Query: 96  QAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGR-GVFITCNY 154
           + +  W  E K++ Y   +   G   GHYTQ+V  +T R GCA   C       F  C Y
Sbjct: 88  EIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQY 147
Query: 155 DPPGNYIGE 163
            P GN+ G+
Sbjct: 148 CPSGNFQGK 156

>pdb|1XX5|A Chain A, Crystal Structure Of Natrin From Naja Atra Snake Venom Length = 221

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPY--------GENIFWGSGNGWTPA 95
           A  M  M+W P  A  A+++AN     C L HS            GE+I+  S N  T  
Sbjct: 33  ASNMLKMEWYPEAASNAERWANT----CSLNHSPDNLRVLEGIQCGESIYMSS-NARTWT 87
Query: 96  QAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGR-GVFITCNY 154
           + +  W  E K++ Y   +   G   GHYTQ+V  +T R GCA   C       F  C Y
Sbjct: 88  EIIHLWHDEYKNFVYGVGANPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQY 147
Query: 155 DPPGNYIGE 163
            P GN+ G+
Sbjct: 148 CPSGNFQGK 156

>pdb|1U53|A Chain A, Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein From The Nematode Parasite Necator Americanus And A Vaccine Antigen For Human Hookworm Infection Length = 196

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSN----GPYGENIFWGSGNGWTPA---- 95
           A +M+ M +D  + + A   A +    C  KHS        GENIF  S +G   A    
Sbjct: 47  AAKMKTMAYDCEVEKTAMNNAKQ----CVFKHSQPNQRKGLGENIFMSSDSGMDKAKAAE 102
Query: 96  QAVMAWISEKKSYDYWSN-SCSGG---QQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFIT 151
           QA  AW  E        N   +GG   +  GHYTQ+V   T ++GC    C      ++ 
Sbjct: 103 QASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEAC--SNMCYVV 160
Query: 152 CNYDPPGNYIGERPY 166
           C Y P GN +G+  Y
Sbjct: 161 CQYGPAGNMMGKDIY 175

>pdb|1WVR|A Chain A, Crystal Structure Of A Crisp Family Ca-Channel Blocker Derived From Snake Venom Length = 221

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 57/130 (43%), Gaps = 16/130 (12%)
Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPY--------GENIFWGS-GNGWTP 94
           A  M  M+W P  A  A+++A    Y C   HS+           GENI+  +    WT 
Sbjct: 33  ASNMLKMEWYPEAAANAERWA----YRCIESHSSRDSRVIGGIKCGENIYMATYPAKWT- 87
Query: 95  AQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGR-GVFITCN 153
              + AW  E K + Y   +       GHYTQ+V  ++ R GCA   C   +   F  C 
Sbjct: 88  -DIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIVWYKSYRAGCAAAYCPSSKYSYFYVCQ 146
Query: 154 YDPPGNYIGE 163
           Y P GN IG+
Sbjct: 147 YCPAGNIIGK 156

>pdb|2DDA|A Chain A, Crystal Structure Of Pseudechetoxin From Pseudechis Australis Length = 211

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 19/144 (13%)
Query: 33  QFLVPQNAARYALR-----MRPMQWDPNLARYAQQYANKRRYDCELKHS--------NGP 79
           + +   NA R +++     M  M+W+   A+ A+++AN+    C   HS           
Sbjct: 9   EIVDKHNALRRSVKPTARNMLQMKWNSRAAQNAKRWANR----CTFAHSPPNKRTVGKLR 64
Query: 80  YGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAK 139
            GENIF  S   +  +  V AW  E K++ Y   +   G   GHYTQVV  ++  +GCA 
Sbjct: 65  CGENIFMSS-QPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSYLIGCAS 123
Query: 140 VTCFGGRGVFITCNYDPPGNYIGE 163
             C   + +++ C Y P GN  G 
Sbjct: 124 AKCSSSKYLYV-CQYCPAGNIRGS 146

>pdb|2DDB|A Chain A, Crystal Structure Of Pseudecin From Pseudechis Porphyriacus Length = 210

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 33  QFLVPQNAARYALR-----MRPMQWDPNLARYAQQYANKRRYDCELKHS--------NGP 79
           + +   NA R +++     M  M+W+ + A+ A+++A++    C   HS           
Sbjct: 8   EIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADR----CTFAHSPPNTRTVGKLR 63
Query: 80  YGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAK 139
            GENIF  S   +  +  V AW  E K++ Y   +   G   GHYTQVV  ++  +GCA 
Sbjct: 64  CGENIFMSS-QPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCAS 122
Query: 140 VTCFGGRGVFITCNYDPPGNYIGE 163
             C   + +++ C Y P GN  G 
Sbjct: 123 AKCSSSKYLYV-CQYCPAGNIRGS 145

>pdb|1RC9|A Chain A, Crystal Structure Of Stecrisp, A Member Of Crisp Family From Trimeresurus Stejnegeri Refined At 1.6 Angstroms Resolution: Structual Relationship Of The Two Domains Length = 221

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 57/130 (43%), Gaps = 16/130 (12%)
Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSN--------GPYGENIFWGS-GNGWTP 94
           A  M  M+W P  A  A+++A    Y C   HS+           GENI+       WT 
Sbjct: 33  ASNMLRMEWYPEAADNAERWA----YRCIESHSSYESRVIEGIKCGENIYMSPYPMKWT- 87
Query: 95  AQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGR-GVFITCN 153
              + AW  E K + Y   +       GHYTQ+V  ++ R+GCA   C       F  C 
Sbjct: 88  -DIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQ 146
Query: 154 YDPPGNYIGE 163
           Y P GN+IG+
Sbjct: 147 YCPAGNFIGK 156

>pdb|1QNX|A Chain A, Ves V 5, An Allergen From Vespula Vulgaris Venom Length = 209

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPY--GENIFWGSGNGW---TPAQAV 98
           A  M+ + W+  LA  AQ +AN+ +Y  +       Y  G+N+            P + V
Sbjct: 76  AKNMKNLVWNDELAYVAQVWANQCQYGHDTCRDVAKYQVGQNVALTGSTAAKYDDPVKLV 135
Query: 99  MAWISEKKSYDYWSNSCSGGQ--QCGHYTQVVRSRTRRVGCAKVTCFGGR--GVFITCNY 154
             W  E K Y+      SG    + GHYTQ+V + T+ VGC  +     +    ++ CNY
Sbjct: 136 KMWEDEVKDYNP-KKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNY 194
Query: 155 DPPGNYIGERPY 166
            P GN+  E  Y
Sbjct: 195 GPSGNFKNEELY 206

>pdb|3NT8|A Chain A, Crystal Structure Of Na-Asp-1 Length = 424

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 41  ARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGP----YGENIFWGS----GNGW 92
           A  A +M  M +D  +   A ++ NK    C  +HS+G      GENI+  S        
Sbjct: 265 APKAAKMLKMVYDCEVEASAIRHGNK----CVYQHSHGEDRPGLGENIYKTSVLKFDKNK 320
Query: 93  TPAQAVMAWISEKKSYDYW-SNSCSGG------QQCGHYTQVVRSRTRRVGCAKVTCFGG 145
              QA   W +E K Y    SN  +         Q GHYTQ+    T ++GCA V C   
Sbjct: 321 AAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFC--N 378
Query: 146 RGVFITCNYDPPGNYIGERPY 166
              F  C Y P GNY+G   Y
Sbjct: 379 DFTFGVCQYGPGGNYMGHVIY 399

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	166
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	3e-61
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	6e-56
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	1e-48
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	8e-48
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	2e-45
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	2e-45
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	4e-45
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	5e-45
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	1e-41
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	6e-39
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	1e-24
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	9e-19

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1 Length = 135

 Score =  184 bits (470), Expect = 3e-61
 Identities = 66/138 (47%), Positives = 85/138 (61%), Gaps = 4/138 (2%)

Query: 29  SLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGS 88
           +    +L   N AR  + + PM WD NLA  AQ YAN R  DC L HS    GEN+  G 
Sbjct: 2   NSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS--GAGENLAKGG 59

Query: 89  GNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGV 148
           G+ +T   AV  W+SE+ SY+Y +N C GG++C HYTQVV   + R+GC +  C  G   
Sbjct: 60  GD-FTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNG-WW 117

Query: 149 FITCNYDPPGNYIGERPY 166
           FI+CNYDP GN+IG+RPY
Sbjct: 118 FISCNYDPVGNWIGQRPY 135

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A* Length = 154

 Score =  172 bits (437), Expect = 6e-56
 Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 8/148 (5%)

Query: 23  SNSNYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSN----G 78
             S      N+ L   N  R    + P++   NL R AQQY+        LKHS     G
Sbjct: 2   GKSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRG 61

Query: 79  PYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCA 138
             GEN+ W S +  T  +    W SE K+Y++     + G   GH+T +V   T+++G  
Sbjct: 62  QCGENLAWASYD-QTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVG 118

Query: 139 KVTCFGGRGVFITCNYDPPGNYIGERPY 166
           K +   G   F+   Y P GN + E  +
Sbjct: 119 KASASDG-SSFVVARYFPAGNVVNEGFF 145

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1 Length = 209

 Score =  155 bits (394), Expect = 1e-48
 Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 8/131 (6%)

Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHS--NGPYGENIFWGSGNG---WTPAQAV 98
           A  M+ + W+  LA  AQ +AN+ +Y  +          G+N+            P + V
Sbjct: 76  AKNMKNLVWNDELAYVAQVWANQCQYGHDTCRDVAKYQVGQNVALTGSTAAKYDDPVKLV 135

Query: 99  MAWISEKKSYDYWSNSCSG-GQQCGHYTQVVRSRTRRVGCAKVTCFGGRG--VFITCNYD 155
             W  E K Y+           + GHYTQ+V + T+ VGC  +     +    ++ CNY 
Sbjct: 136 KMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYG 195

Query: 156 PPGNYIGERPY 166
           P GN+  E  Y
Sbjct: 196 PSGNFKNEELY 206

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus} Length = 196

 Score =  153 bits (387), Expect = 8e-48
 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 10/131 (7%)

Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPA----QAVM 99
           A +M+ M +D  + + A   A +  +     +     GENIF  S +G   A    QA  
Sbjct: 47  AAKMKTMAYDCEVEKTAMNNAKQCVFKHSQPNQRKGLGENIFMSSDSGMDKAKAAEQASK 106

Query: 100 AWISEKKSYDYWSNSC----SGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYD 155
           AW  E        N         +  GHYTQ+V   T ++GC    C      ++ C Y 
Sbjct: 107 AWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEAC--SNMCYVVCQYG 164

Query: 156 PPGNYIGERPY 166
           P GN +G+  Y
Sbjct: 165 PAGNMMGKDIY 175

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A Length = 221

 Score =  147 bits (373), Expect = 2e-45
 Identities = 43/148 (29%), Positives = 61/148 (41%), Gaps = 13/148 (8%)

Query: 31  ANQFLVPQNAAR-----YALRMRPMQWDPNLARYAQQYANKRRY----DCELKHSNGPYG 81
             + +   N+ R      A  M  M+W P  A  A+++AN        D          G
Sbjct: 15  QKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNLRVLEGIQCG 74

Query: 82  ENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVT 141
           E+I+  S    T  + +  W  E K++ Y   +   G   GHYTQ+V  +T R GCA   
Sbjct: 75  ESIYMSSNA-RTWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSY 133

Query: 142 CF-GGRGVFITCNYDPPGNYIGE--RPY 166
           C       F  C Y P GN+ G+   PY
Sbjct: 134 CPSSAWSYFYVCQYCPSGNFQGKTATPY 161

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta} Length = 218

 Score =  147 bits (372), Expect = 2e-45
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 21/140 (15%)

Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHS------NGPYGENIFWGSGNG---WTP 94
           A++M  + WDP LA  AQ++AN+    C  +H           G+NI   S +G    TP
Sbjct: 73  AVKMPNLTWDPELATIAQRWANQ----CTFEHDACRNVERFAVGQNIAATSSSGKNKSTP 128

Query: 95  AQAVMAWISEKKSYDYWSNSC-----SGGQQCGHYTQVVRSRTRRVGCAKVTCF---GGR 146
            + ++ W +E K +D    S      +   + GHYTQ+V ++T ++GC ++         
Sbjct: 129 NEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWT 188

Query: 147 GVFITCNYDPPGNYIGERPY 166
             ++ CNY P GN +G   Y
Sbjct: 189 KHYLVCNYGPAGNVLGAPIY 208

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A Length = 205

 Score =  146 bits (370), Expect = 4e-45
 Identities = 48/156 (30%), Positives = 68/156 (43%), Gaps = 23/156 (14%)

Query: 31  ANQFLVPQNAAR-----YALRMRPMQWDPNLARYAQQYANK--------RRYDCELKHSN 77
               +   N  R      A  M  M WDP LA+ A+ +A+          +   +L  + 
Sbjct: 19  IKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNF 78

Query: 78  GPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGC 137
              GENI+ GS   ++ + A+  W  E + YD+ +  C   + CGHYTQVV + + +VGC
Sbjct: 79  TSLGENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRIC--KKVCGHYTQVVWADSYKVGC 136

Query: 138 AKVTC-------FGGRGVFITCNYDPPGNYIGERPY 166
           A   C           G    CNY P GNY    PY
Sbjct: 137 AVQFCPKVSGFDALSNGAHFICNYGPGGNY-PTWPY 171

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A Length = 210

 Score =  146 bits (369), Expect = 5e-45
 Identities = 45/151 (29%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 31  ANQFLVPQNAAR-----YALRMRPMQWDPNLARYAQQYANKRRYDCELKHSN-------- 77
             + +   NA R      A  M  M+W+ + A+ A+++A++    C   HS         
Sbjct: 6   QKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADR----CTFAHSPPNTRTVGK 61

Query: 78  GPYGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGC 137
              GENIF  S   +  +  V AW  E K++ Y   +   G   GHYTQVV  ++  +GC
Sbjct: 62  LRCGENIFMSSQP-FPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGC 120

Query: 138 AKVTCFGGRGVFITCNYDPPGNYIGE--RPY 166
           A   C         C Y P GN  G    PY
Sbjct: 121 ASAKCSSS-KYLYVCQYCPAGNIRGSIATPY 150

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score =  142 bits (360), Expect = 1e-41
 Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 21/156 (13%)

Query: 26  NYWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGP----YG 81
           +  +   +       A  A +M  M +D  +   A ++ NK    C  +HS+G      G
Sbjct: 250 SSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGNK----CVYQHSHGEDRPGLG 305

Query: 82  ENIFWGSGNGWT----PAQAVMAWISEKKSYDYWSNSC-------SGGQQCGHYTQVVRS 130
           ENI+  S   +       QA   W +E K Y    ++            Q GHYTQ+   
Sbjct: 306 ENIYKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWD 365

Query: 131 RTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY 166
            T ++GCA V C      F  C Y P GNY+G   Y
Sbjct: 366 TTYKLGCAVVFC--NDFTFGVCQYGPGGNYMGHVIY 399

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score =  136 bits (342), Expect = 6e-39
 Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 13/130 (10%)

Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNG-PYGENIFWGSGNGWTP------AQ 96
           A  M  + WD  + +  Q         C    +      +N    S +G  P        
Sbjct: 66  AKNMYKLSWDCAMEQQLQDAIQS----CPSGFAGIQGVAQNTMSWSSSGGYPDPSVKIEP 121

Query: 97  AVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDP 156
            +  W S  K      ++   G     ++ +V S T ++GCA   C  G  + ++C Y+ 
Sbjct: 122 TLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVC--GTKLAVSCIYNG 179

Query: 157 PGNYIGERPY 166
            G    +  +
Sbjct: 180 VGYITNQPMW 189

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C* Length = 233

 Score = 94.4 bits (234), Expect = 1e-24
 Identities = 27/135 (20%), Positives = 39/135 (28%), Gaps = 15/135 (11%)

Query: 46  RMRPMQWDPNLARYAQQYANKRRY---DCELKHSNGPYGENIFWGSGNGWTPA-----QA 97
           RM+ + WD  LA  A+++          C         G+  F  SG+           A
Sbjct: 67  RMKVVVWDAELAGLAKRHTKGCVGETHACRNTERFWLPGQLNFKYSGDKLPRIKELIDDA 126

Query: 98  VMAWISEKKSYDYWS----NSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRG--VFIT 151
           V     +K +                        +  R   VGC   T   G      +T
Sbjct: 127 VKKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDGAKARALLT 186

Query: 152 CNYDPPGNYIGERPY 166
           CN+    N  G   Y
Sbjct: 187 CNFS-SQNTRGRPVY 200

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A Length = 206

 Score = 78.2 bits (192), Expect = 9e-19
 Identities = 21/127 (16%), Positives = 33/127 (25%), Gaps = 24/127 (18%)

Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWIS 103
           A  M  + +D  L   A++              +   G   F G   G   +        
Sbjct: 44  AREMYGLVYDCGLEEEARKEIKL----PGYADLHH-RGVTRFSGDYEGSAISALKEIL-- 96

Query: 104 EKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCF----GGRGVFITCNYDPPGN 159
                + +S             QVV  +  R GC+         G R +   C YD    
Sbjct: 97  -----ETFSA------DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKPK 145

Query: 160 YIGERPY 166
                 +
Sbjct: 146 --DGESF 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	166
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	100.0
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	100.0
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	100.0
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	100.0
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	100.0
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	100.0
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	100.0
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	100.0
4ifa_A	339	Extracellular protein containing A SCP domain; vac	99.67
4h0a_A	323	Uncharacterized protein; CAP protein family, cyste	99.46

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1

Probab=100.00  E-value=9.9e-46  Score=256.55  Aligned_cols=133  Identities=49%  Similarity=0.924  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCCCCccceEEeccCCCCCHHHHHHHHHhhhccCC
Q 031070           30 LANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSYD  109 (166)
Q Consensus        30 ~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~~~Gen~~~~~~~~~~~~~~v~~W~~e~~~y~  109 (166)
                      +++.||+.||.+|+.++|+||+||++|+..||.||++|+.+|.+.|+++  |||++++. ...++.++|+.|++|..+|+
T Consensus         3 ~~~~iL~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~a~~c~~~hs~~--GENla~~~-~~~~~~~~v~~W~~E~~~y~   79 (135)
T 1cfe_A            3 SPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKGG-GDFTGRAAVQLWVSERPSYN   79 (135)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSCSS--SBCCEECS-SSCCHHHHHHHHHTTGGGEE
T ss_pred             HHHHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHHHhcCCCcccCCC--CeEEEEec-CCCCHHHHHHHHHhHHhhCC
Confidence            5789999999999999999999999999999999999988999999876  99999887 56789999999999999999


Q ss_pred             cCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEecCCCCCCCCCCC
Q 031070          110 YWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY  166 (166)
Q Consensus       110 ~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  166 (166)
                      |..+.+..++.++|||||||+++++||||++.|.++ ..++||+|+|+||+.|++||
T Consensus        80 ~~~~~~~~~~~~gHfTQ~vW~~t~~vGCa~~~c~~~-~~~~VC~Y~p~GN~~g~~pY  135 (135)
T 1cfe_A           80 YATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNG-WWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             GGGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTS-SEEEEEECSSCCSCTTSCCC
T ss_pred             CCCCCcCCCCcccceeeeEEccCcEEeEEEEEeCCC-CEEEEEEEeCCCCCCCCCCC
Confidence            999888777789999999999999999999999875 68999999999999999998

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*

Probab=100.00  E-value=4.8e-45  Score=258.27  Aligned_cols=136  Identities=32%  Similarity=0.508  Sum_probs=125.1

Q ss_pred             ChHHHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCC----CCccceEEeccCCCCCHHHHHHHHH
Q 031070           27 YWSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSN----GPYGENIFWGSGNGWTPAQAVMAWI  102 (166)
Q Consensus        27 ~~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~----~~~Gen~~~~~~~~~~~~~~v~~W~  102 (166)
                      +++|+++||+.||.+|+.|+++||+||++|++.||.||++++.+|.+.|++    +.+|||+++.. .+.++.++|+.||
T Consensus         6 ~~~f~~~iL~~HN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~~~~~hs~~~~~~~~GeNl~~~~-~~~~~~~~v~~W~   84 (154)
T 4aiw_A            6 SKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWY   84 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCCCCHHHHTTSSEEEEEEES-SCCCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhhhcccccccccCCCCCCCeeeEecC-CCCCHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999975    57899999876 4567899999999


Q ss_pred             hhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEecCCCCCCCCCCC
Q 031070          103 SEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY  166 (166)
Q Consensus       103 ~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  166 (166)
                      +|..+|+|..+.+..+  +||||||||++|++||||++.|.++ ..++||+|+|+||+.|+.+|
T Consensus        85 ~E~~~y~~~~~~~~~~--~gHfTQ~VW~~t~~vGCg~a~c~~~-~~~vVC~Y~P~GN~~g~~~y  145 (154)
T 4aiw_A           85 SEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDG-SSFVVARYFPAGNVVNEGFF  145 (154)
T ss_dssp             GGGGGCCTTSCSCCTT--THHHHHHHCTTCCEEEEEEEECTTS-CEEEEEEEESCCCCCSTTHH
T ss_pred             HHhhhcccCCCCcCCC--cCCeeeeehhhhceeeeEEEEcCCC-CEEEEEEEeCCCccCCccch
Confidence            9999999998887653  9999999999999999999999886 68999999999999998776

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A

Probab=100.00  E-value=2.3e-39  Score=241.40  Aligned_cols=136  Identities=33%  Similarity=0.590  Sum_probs=121.9

Q ss_pred             CChHHHHHHHHHHHHHHhhCC-----CCCCcccHHHHHHHHHHHHhhhcCCccccCCC--------CccceEEeccCCCC
Q 031070           26 NYWSLANQFLVPQNAARYALR-----MRPMQWDPNLARYAQQYANKRRYDCELKHSNG--------PYGENIFWGSGNGW   92 (166)
Q Consensus        26 ~~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~--------~~Gen~~~~~~~~~   92 (166)
                      ++.++++.||+.||.+|++++     |.+|+||++||+.||.||    ++|.+.|++.        .+|||+++.. ...
T Consensus        10 ~~~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A----~~C~~~Hs~~~~r~~~~~~~GENl~~~~-~~~   84 (221)
T 1xta_A           10 RRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWA----NTCSLNHSPDNLRVLEGIQCGESIYMSS-NAR   84 (221)
T ss_dssp             TSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHH----TTTCCSCCCGGGCEETTEECEEEEEEES-SCC
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCccccCccCccCHHHHHHHHHHH----hcCCCCCcCccccccCCCCCceEEEeec-CCC
Confidence            467899999999999999997     779999999999999999    9999999862        4799999876 334


Q ss_pred             CHHHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCC-CeEEEEEEecCCCCCCCC--CCC
Q 031070           93 TPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGG-RGVFITCNYDPPGNYIGE--RPY  166 (166)
Q Consensus        93 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~-~~~~~vC~Y~p~gn~~g~--~~Y  166 (166)
                      ++.++|+.||+|..+|+|..+.+..+..++|||||||+++++||||++.|..+ ...++||+|+|+||+.|+  +||
T Consensus        85 ~~~~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~VC~Y~P~GN~~g~~~~pY  161 (221)
T 1xta_A           85 TWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY  161 (221)
T ss_dssp             CHHHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTTTTCSS
T ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCCCCchhHHHHHHHHhcCEeeEEEEEcCCCCccEEEEEEEeCCcCCCCCcCCCc
Confidence            68999999999999999988766566779999999999999999999999874 468999999999999999  998

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A

Probab=100.00  E-value=2e-39  Score=240.01  Aligned_cols=133  Identities=33%  Similarity=0.601  Sum_probs=119.5

Q ss_pred             hHHHHHHHHHHHHHHhhCC-----CCCCcccHHHHHHHHHHHHhhhcCCccccCCC--------CccceEEeccCCCCCH
Q 031070           28 WSLANQFLVPQNAARYALR-----MRPMQWDPNLARYAQQYANKRRYDCELKHSNG--------PYGENIFWGSGNGWTP   94 (166)
Q Consensus        28 ~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~--------~~Gen~~~~~~~~~~~   94 (166)
                      +++++.||+.||.+|++++     |.+|+||++||..||.||    ++|.+.|++.        .+|||++++. ...++
T Consensus         3 ~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A----~~C~~~Hs~~~~r~~~~~~~GENl~~~~-~~~~~   77 (210)
T 2ddb_A            3 KNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWA----DRCTFAHSPPNTRTVGKLRCGENIFMSS-QPFPW   77 (210)
T ss_dssp             -CHHHHHHHHHHHHHTTCSSCBSSCBCCEECHHHHHHHHHHH----TTTCCSCCCGGGSEETTEECEEEEEEES-SCCCH
T ss_pred             HHHHHHHHHHHHHHHHHcCCccccCcccccCHHHHHHHHHHH----hcCCCCCCCccccccCCCCCcceEEEEc-CCCCH
Confidence            3679999999999999997     779999999999999999    9999999862        4799999876 33568


Q ss_pred             HHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEecCCCCCCCC--CCC
Q 031070           95 AQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGE--RPY  166 (166)
Q Consensus        95 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~--~~Y  166 (166)
                      .++|+.||+|..+|+|..+.+..+..++|||||||+++++||||++.|..+ .+++||+|+|+||+.|+  +||
T Consensus        78 ~~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~-~~~~VC~Y~P~GN~~g~~~~pY  150 (210)
T 2ddb_A           78 SGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKCSSS-KYLYVCQYCPAGNIRGSIATPY  150 (210)
T ss_dssp             HHHHHHHHGGGGGEETTTEESSTTSCCHHHHHHTCTTCCEEEEEEEEEETT-EEEEEEEEESCSSSTTCTTCSS
T ss_pred             HHHHHHHHHHhhhCCCCCCCCCCCCcccchhhhhhhhccEeeEEEEEcCCC-CEEEEEEeeCCCCCCCCccCCC
Confidence            999999999999999988766666779999999999999999999999886 68999999999999999  998

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=100.00  E-value=2.5e-39  Score=239.43  Aligned_cols=138  Identities=28%  Similarity=0.479  Sum_probs=118.3

Q ss_pred             CCChHHHHHHHHHHHHHHhhCC-----------------CCCCcccHHHHHHHHHHHHhhhcCCccccCC------CCcc
Q 031070           25 SNYWSLANQFLVPQNAARYALR-----------------MRPMQWDPNLARYAQQYANKRRYDCELKHSN------GPYG   81 (166)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~------~~~G   81 (166)
                      .+++++++.||+.||.+|++++                 |++|+||++||..||.||    ++|.+.|+.      ..+|
T Consensus        40 ~l~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A----~~C~~~h~~~~~~~~~~~G  115 (209)
T 1qnx_A           40 GLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWA----NQCQYGHDTCRDVAKYQVG  115 (209)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHH----TTCCCSCCSCCCCSSSCCE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCccccccccccCHHHHHHHHHHH----hcCcccCCCccCCCCCCCc
Confidence            4678899999999999999983                 789999999999999999    999998875      1489


Q ss_pred             ceEEeccCC---CCCHHHHHHHHHhhhccCCcCCCCCC-CCcccchHHHHHHhcCCeEEEEEEEeCCC--CeEEEEEEec
Q 031070           82 ENIFWGSGN---GWTPAQAVMAWISEKKSYDYWSNSCS-GGQQCGHYTQVVRSRTRRVGCAKVTCFGG--RGVFITCNYD  155 (166)
Q Consensus        82 en~~~~~~~---~~~~~~~v~~W~~e~~~y~~~~~~~~-~~~~~~~f~qmiw~~~~~vGCa~~~c~~~--~~~~~vC~Y~  155 (166)
                      ||+++....   ..++.++|+.||+|..+|++..+-.. ....++|||||||+++++||||++.|..+  ...++||+|+
T Consensus       116 eNl~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~  195 (209)
T 1qnx_A          116 QNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYG  195 (209)
T ss_dssp             EEEEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             cEEEEecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeEEEEEeCCCceeEEEEEEeC
Confidence            999987622   34688999999999999999854211 12468999999999999999999999764  2478999999


Q ss_pred             CCCCCCCCCCC
Q 031070          156 PPGNYIGERPY  166 (166)
Q Consensus       156 p~gn~~g~~~Y  166 (166)
                      |+||+.|++||
T Consensus       196 P~GN~~g~~~Y  206 (209)
T 1qnx_A          196 PSGNFKNEELY  206 (209)
T ss_dssp             SCCCCTTSCSS
T ss_pred             CCCCCCCCCCC
Confidence            99999999998

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}

Probab=100.00  E-value=5.2e-39  Score=235.59  Aligned_cols=136  Identities=31%  Similarity=0.514  Sum_probs=118.6

Q ss_pred             CCChHHHHHHHHHHHHHHhhCC-----------------CCCCcccHHHHHHHHHHHHhhhcCCccccCC----CCccce
Q 031070           25 SNYWSLANQFLVPQNAARYALR-----------------MRPMQWDPNLARYAQQYANKRRYDCELKHSN----GPYGEN   83 (166)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~----~~~Gen   83 (166)
                      .+++++++.||+.||.+|++++                 |.+|+||++||..||.||    ++|.+.|+.    ..+|||
T Consensus        11 ~lt~~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~~L~Wd~~La~~Aq~~A----~~C~~~h~~~~~~~~~GeN   86 (196)
T 1u53_A           11 GMSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNA----KQCVFKHSQPNQRKGLGEN   86 (196)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCBCCEECHHHHHHHHHHH----TTCCCCCCCGGGSTTCEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccchhcccCHHHHHHHHHHH----HhCccCCCccccCCCCCeE
Confidence            4588999999999999999982                 679999999999999999    999999984    368999


Q ss_pred             EEeccCCCC----CHHHHHHHHHhhhccCCcCC-CCCC---CCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEec
Q 031070           84 IFWGSGNGW----TPAQAVMAWISEKKSYDYWS-NSCS---GGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYD  155 (166)
Q Consensus        84 ~~~~~~~~~----~~~~~v~~W~~e~~~y~~~~-~~~~---~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y~  155 (166)
                      +++......    .+.++|+.||+|...|++.. +.+.   .+..++|||||||+++++||||++.|...  .++||+|+
T Consensus        87 l~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~~--~~~VC~Y~  164 (196)
T 1u53_A           87 IFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSNM--CYVVCQYG  164 (196)
T ss_dssp             EEEESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSSC--EEEEEEEE
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeEEEEeCCC--EEEEEEeC
Confidence            997763322    35789999999999999887 5443   24569999999999999999999999874  99999999


Q ss_pred             CCCCCCCCCCC
Q 031070          156 PPGNYIGERPY  166 (166)
Q Consensus       156 p~gn~~g~~~Y  166 (166)
                      |+||+.|++||
T Consensus       165 p~GN~~g~~~Y  175 (196)
T 1u53_A          165 PAGNMMGKDIY  175 (196)
T ss_dssp             SCCCCTTSBSS
T ss_pred             CCCCCCCCcCC
Confidence            99999999998

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A

Probab=100.00  E-value=2.2e-38  Score=233.73  Aligned_cols=134  Identities=36%  Similarity=0.693  Sum_probs=119.0

Q ss_pred             CChHHHHHHHHHHHHHHhhCC-----CCCCcccHHHHHHHHHHHHhhhcCCccccCC------------CCccceEEecc
Q 031070           26 NYWSLANQFLVPQNAARYALR-----MRPMQWDPNLARYAQQYANKRRYDCELKHSN------------GPYGENIFWGS   88 (166)
Q Consensus        26 ~~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~------------~~~Gen~~~~~   88 (166)
                      .+++++++||+.||.+|+.++     |.+|+||++||..||.||    ++|.+.|++            ..+|||++.+.
T Consensus        14 ~~~~f~~~~L~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A----~~C~~~h~~~~~~~~~~~~~~~~~GeNl~~~~   89 (205)
T 3q2u_A           14 ENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWA----SNCQFSHNTRLKPPHKLHPNFTSLGENIWTGS   89 (205)
T ss_dssp             TCHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHH----TTCBSSCCTTSSTTCCSSTTCSSCEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCcccCccCccCHHHHHHHHHHH----HhCCCCCCccccccccccCCCCCCceEEEEcc
Confidence            467899999999999999997     789999999999999999    899888764            36899998876


Q ss_pred             CCCCCHHHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCC-------CeEEEEEEecCCCCCC
Q 031070           89 GNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGG-------RGVFITCNYDPPGNYI  161 (166)
Q Consensus        89 ~~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~-------~~~~~vC~Y~p~gn~~  161 (166)
                      ....++.++|+.|++|...|+|..+.+.  ..++|||||||+++++||||++.|...       ...++||+|+|+||+ 
T Consensus        90 ~~~~~~~~~v~~W~~E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~VC~Y~P~GN~-  166 (205)
T 3q2u_A           90 VPIFSVSSAITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-  166 (205)
T ss_dssp             TTTCCHHHHHHHHHGGGGGEETTTTEES--SCCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEEEEEEESCCCC-
T ss_pred             CCCCCHHHHHHHHHhHHHhcCCCCCCcc--chhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEEEEEEECCCCc-
Confidence            5567899999999999999999887664  469999999999999999999999852       357899999999999 


Q ss_pred             CCCCC
Q 031070          162 GERPY  166 (166)
Q Consensus       162 g~~~Y  166 (166)
                      +++||
T Consensus       167 ~~~pY  171 (205)
T 3q2u_A          167 PTWPY  171 (205)
T ss_dssp             SSCSS
T ss_pred             CCCCC
Confidence            78888

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=100.00  E-value=1.6e-38  Score=236.50  Aligned_cols=139  Identities=29%  Similarity=0.528  Sum_probs=117.8

Q ss_pred             CCCChHHHHHHHHHHHHHHhhCC-----------------CCCCcccHHHHHHHHHHHHhhhcCCccccCC------CCc
Q 031070           24 NSNYWSLANQFLVPQNAARYALR-----------------MRPMQWDPNLARYAQQYANKRRYDCELKHSN------GPY   80 (166)
Q Consensus        24 ~~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~------~~~   80 (166)
                      ..+++++++.||+.||.+|++++                 |++|+||++||+.||.||    ++|.+.|++      ..+
T Consensus        36 ~~~t~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A----~~C~~~Hs~c~~~~~~~~  111 (218)
T 2vzn_A           36 VGFTDAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWA----NQCTFEHDACRNVERFAV  111 (218)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCCCCEECHHHHHHHHHHH----TTCCSSCCSCCCCSSSCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhchhccCCHHHHHHHHHHH----HhCCcCCCCCCCCccCCC
Confidence            35678899999999999999983                 789999999999999999    999998876      148


Q ss_pred             cceEEeccCC---CCCHHHHHHHHHhhhccCCcCCC-C--CC--CCcccchHHHHHHhcCCeEEEEEEEeCC-C--CeEE
Q 031070           81 GENIFWGSGN---GWTPAQAVMAWISEKKSYDYWSN-S--CS--GGQQCGHYTQVVRSRTRRVGCAKVTCFG-G--RGVF  149 (166)
Q Consensus        81 Gen~~~~~~~---~~~~~~~v~~W~~e~~~y~~~~~-~--~~--~~~~~~~f~qmiw~~~~~vGCa~~~c~~-~--~~~~  149 (166)
                      |||+++....   ...+.++|+.||+|..+|++... .  ..  ....++|||||||+++++||||++.|.. +  ...+
T Consensus       112 GeNl~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~  191 (218)
T 2vzn_A          112 GQNIAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHY  191 (218)
T ss_dssp             EEEEEEEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHHHHHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEE
T ss_pred             ceEEEEEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCcccCCCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEE
Confidence            9999987622   23567999999999999999742 1  11  1245899999999999999999999976 3  2579


Q ss_pred             EEEEecCCCCCCCCCCC
Q 031070          150 ITCNYDPPGNYIGERPY  166 (166)
Q Consensus       150 ~vC~Y~p~gn~~g~~~Y  166 (166)
                      +||+|+|+||+.|++||
T Consensus       192 vVC~Y~P~GN~~g~~~y  208 (218)
T 2vzn_A          192 LVCNYGPAGNVLGAPIY  208 (218)
T ss_dssp             EEEEEESCCCCTTSCSS
T ss_pred             EEEEECCCCCCCCCccc
Confidence            99999999999999998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=2.1e-37  Score=250.47  Aligned_cols=136  Identities=20%  Similarity=0.250  Sum_probs=119.6

Q ss_pred             CCChHHHHHHHHHHHHHHhhCC----------------CCCCcccHHHHHHHHHHHHhhhcCCccccCC-CCccceEEec
Q 031070           25 SNYWSLANQFLVPQNAARYALR----------------MRPMQWDPNLARYAQQYANKRRYDCELKHSN-GPYGENIFWG   87 (166)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~----------------m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~-~~~Gen~~~~   87 (166)
                      .+++++|+.||+.||.+|++++                |.+|+||++||..||.||    ++|...|+. ..+|||++..
T Consensus        31 ~~~~~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~~L~Wd~eLa~~Aq~~a----~~C~~~h~~~~~~GeNl~~~  106 (424)
T 3nt8_A           31 GITDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAI----QSCPSGFAGIQGVAQNTMSW  106 (424)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCBCCEECHHHHHHHHHHC----TTCCSSCCCCTTCEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCCccccCHHHHHHHHHHH----hhCCCcCCCCCCceeeEEec
Confidence            5689999999999999999992                889999999999999999    999998876 4799999876


Q ss_pred             c-CC-----CCCHHHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEecCCCCCC
Q 031070           88 S-GN-----GWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYI  161 (166)
Q Consensus        88 ~-~~-----~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~  161 (166)
                      . .+     ...+.++|+.|++|...|++.......+..++|||||||+++++||||++.|..  ..++||+|+|+||+.
T Consensus       107 ~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~ghfTqmvw~~t~~vGCa~~~c~~--~~~~VC~Y~p~GN~~  184 (424)
T 3nt8_A          107 SSSGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGT--KLAVSCIYNGVGYIT  184 (424)
T ss_dssp             ECTTCCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCCCTTCHHHHHHHCTTCCEEEEEEEEETT--EEEEEEEESSCCCST
T ss_pred             cccCCcCCHHHHHHHHHHHHHHHHHHcCCcccccCCCcchHHHHHHHHHhcCeeceEEEEeCC--cEEEEEEECCCCCcc
Confidence            5 11     123689999999999999998654444457899999999999999999999987  599999999999999


Q ss_pred             CCCCC
Q 031070          162 GERPY  166 (166)
Q Consensus       162 g~~~Y  166 (166)
                      |++||
T Consensus       185 g~~~Y  189 (424)
T 3nt8_A          185 NQPMW  189 (424)
T ss_dssp             TCBSS
T ss_pred             ccccc
Confidence            99998

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=100.00  E-value=5e-37  Score=230.57  Aligned_cols=138  Identities=22%  Similarity=0.257  Sum_probs=115.6

Q ss_pred             CCCChHHHHHHHHHHHHHHhhC-----------CCCCCcccHHHHHHHHHHHHhhhcCCccccCC----C---CccceEE
Q 031070           24 NSNYWSLANQFLVPQNAARYAL-----------RMRPMQWDPNLARYAQQYANKRRYDCELKHSN----G---PYGENIF   85 (166)
Q Consensus        24 ~~~~~~~~~~il~~hN~~R~~~-----------~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~----~---~~Gen~~   85 (166)
                      ..+++++++.||+.||.+|+.+           .|++|+||++||..||.||    ++|.+.|++    .   .+|||++
T Consensus        34 ~~~s~~~~~~il~~HN~~R~~va~G~~~~P~A~nM~~L~Wd~~La~~Aq~~a----~~C~~~h~~c~~~~~~~~~Gen~~  109 (233)
T 3u3l_C           34 RELLKEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHT----KGCVGETHACRNTERFWLPGQLNF  109 (233)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTCTTCCCBSSCBCCEECHHHHHHHHHHH----TTCCSCCCCBCCCSSCSSCEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHcCCCCCCccccCCccEECHHHHHHHHHHH----HhCCCCCCcccccCcCCcCeEEEE
Confidence            3568899999999999999999           4999999999999999999    999998875    1   5899887


Q ss_pred             eccCCC-CC----HHHHHHHHHhhhccCCcCC----CCCCCCcccchHHHHHHhcCCeEEEEEEEeCCC--CeEEEEEEe
Q 031070           86 WGSGNG-WT----PAQAVMAWISEKKSYDYWS----NSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGG--RGVFITCNY  154 (166)
Q Consensus        86 ~~~~~~-~~----~~~~v~~W~~e~~~y~~~~----~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~--~~~~~vC~Y  154 (166)
                      ...+.. .+    +.++|+.||+|..+|++..    +....+..++|||||||+++++||||++.|..+  ...++||+|
T Consensus       110 ~~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~VC~Y  189 (233)
T 3u3l_C          110 KYSGDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNF  189 (233)
T ss_dssp             EEEESSCCCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEE
T ss_pred             EecCCCCCCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCcccccchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEEEEEC
Confidence            665222 22    5789999999999999753    122234579999999999999999999999864  358999999


Q ss_pred             cCCCCCCCCCCC
Q 031070          155 DPPGNYIGERPY  166 (166)
Q Consensus       155 ~p~gn~~g~~~Y  166 (166)
                      +| ||+.|++||
T Consensus       190 ~p-GN~~g~~~Y  200 (233)
T 3u3l_C          190 SS-QNTRGRPVY  200 (233)
T ss_dssp             SC-CCCTTSCSS
T ss_pred             CC-CCCCCCcee
Confidence            97 899999998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=2.4e-35  Score=238.46  Aligned_cols=136  Identities=33%  Similarity=0.496  Sum_probs=119.1

Q ss_pred             CCChHHHHHHHHHHHHHHhhCC-----------------CCCCcccHHHHHHHHHHHHhhhcCCccccCCC----Cccce
Q 031070           25 SNYWSLANQFLVPQNAARYALR-----------------MRPMQWDPNLARYAQQYANKRRYDCELKHSNG----PYGEN   83 (166)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~----~~Gen   83 (166)
                      .+++++++.||+.||.+|++++                 |.+|+||++||+.||.||    ++|.+.|++.    .+|||
T Consensus       232 ~~~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a----~~C~~~h~~~~~~~~~GeN  307 (424)
T 3nt8_A          232 GMTDSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHG----NKCVYQHSHGEDRPGLGEN  307 (424)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHH----TTCCSSCCCTTTSTTCEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHH----HhCcccCCCccccCcccee
Confidence            4688999999999999999986                 458999999999999999    9999999863    69999


Q ss_pred             EEeccCCCC----CHHHHHHHHHhhhccCCcCCCC-C------CCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEE
Q 031070           84 IFWGSGNGW----TPAQAVMAWISEKKSYDYWSNS-C------SGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITC  152 (166)
Q Consensus        84 ~~~~~~~~~----~~~~~v~~W~~e~~~y~~~~~~-~------~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC  152 (166)
                      ++.......    .+.++|+.||+|...|++.... +      ..+..++|||||||+++++||||++.|.++  .++||
T Consensus       308 l~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~--~~~VC  385 (424)
T 3nt8_A          308 IYKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDF--TFGVC  385 (424)
T ss_dssp             EEEESSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEEEEECSSS--EEEEE
T ss_pred             EEecccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCCCCcccchHHHhhhhcceeeeEEEEeCCC--eEEEE
Confidence            998864333    4789999999999999986543 1      134579999999999999999999999886  79999


Q ss_pred             EecCCCCCCCCCCC
Q 031070          153 NYDPPGNYIGERPY  166 (166)
Q Consensus       153 ~Y~p~gn~~g~~~Y  166 (166)
                      +|+|+||+.|++||
T Consensus       386 ~Y~p~GN~~g~~~Y  399 (424)
T 3nt8_A          386 QYGPGGNYMGHVIY  399 (424)
T ss_dssp             EEESCCCCTTSBSS
T ss_pred             EecCCCCcCCCCCC
Confidence            99999999999998

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A

Probab=100.00  E-value=2.4e-33  Score=205.52  Aligned_cols=118  Identities=17%  Similarity=0.151  Sum_probs=97.1

Q ss_pred             CCChHHHHHHHHHHHHHHhhCC------------CCCCcccHHHHHHHHHHHHhhhcCCccccCCCCccceEEeccCC--
Q 031070           25 SNYWSLANQFLVPQNAARYALR------------MRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGN--   90 (166)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~------------m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~~~Gen~~~~~~~--   90 (166)
                      .+++++|+.||+.||.+|+.++            |.+|+||++||..||.||    + |. .+.. ..|||++...+.  
T Consensus        13 ~lt~~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~~l~Wd~eLa~~Aq~~A----~-C~-~~~~-~~GeNl~~~sg~~~   85 (206)
T 3s6s_A           13 MVDRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEI----K-LP-GYAD-LHHRGVTRFSGDYE   85 (206)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCBCCEEEHHHHHHHHHHH----H-ST-THHH-HTTCEEEEEEEECS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCCCCCcchhhcCcCCchHHHHHHHHHhh----c-CC-CCCC-CCCcEEEEecCCCC
Confidence            4588999999999999999874            778999999999999999    8 98 3322 239999654421  


Q ss_pred             CCCH--HHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCC----CCeEEEEEEecCCCCCCCCC
Q 031070           91 GWTP--AQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFG----GRGVFITCNYDPPGNYIGER  164 (166)
Q Consensus        91 ~~~~--~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~----~~~~~~vC~Y~p~gn~~g~~  164 (166)
                      ...+  .++|+.|++|               .++|||||||.++++||||++.|..    +...++||+|+|+|  .|++
T Consensus        86 ~~~~~~~~av~~W~~E---------------~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~vVCnY~p~G--~g~~  148 (206)
T 3s6s_A           86 GSAISALKEILETFSA---------------DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKP--KDGE  148 (206)
T ss_dssp             SCHHHHHHHHHHHHTT---------------CHHHHHHHHCTTCCEEEEEEEECC-------EEEEEEEESCCC--CTTC
T ss_pred             ccchhHHHHHHHHHhh---------------hhhhHHHHHHHhhceeeEEEEEecCcCCCCceEEEEEEeCCCC--CCCC
Confidence            2223  3899999999               3899999999999999999999962    23589999999998  9999


Q ss_pred             CC
Q 031070          165 PY  166 (166)
Q Consensus       165 ~Y  166 (166)
                      ||
T Consensus       149 ~Y  150 (206)
T 3s6s_A          149 SF  150 (206)
T ss_dssp             CC
T ss_pred             Cc
Confidence            98

>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}

Probab=99.67  E-value=2.6e-16  Score=123.07  Aligned_cols=94  Identities=18%  Similarity=0.234  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCCC-----------------CccceEEeccCCC
Q 031070           29 SLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNG-----------------PYGENIFWGSGNG   91 (166)
Q Consensus        29 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-----------------~~Gen~~~~~~~~   91 (166)
                      .+.+.+|+.||.+|+.++++||.||+.|++.|+.||+.|+..|.+.|..+                 .+|||++.+.   
T Consensus       219 a~e~~vl~lvN~~Ra~~Gl~pL~~d~~L~~aAq~hA~dMa~~~~fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~---  295 (339)
T 4ifa_A          219 GNMQQIFDLTNIIRSRHNLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQH---  295 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESC---
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHhhcCCeecCCCCCCCHHHHHHHcCCCcCceeEEEEEeC---
Confidence            35789999999999999999999999999999999999998888888751                 3699999986   


Q ss_pred             CCHHHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEE
Q 031070           92 WTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVT  141 (166)
Q Consensus        92 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~  141 (166)
                      .++.++++.|++                ..||+.+|+|++.++||||+..
T Consensus       296 ~s~~~av~~Wmn----------------SpGHr~NIL~~~~t~iGvGv~~  329 (339)
T 4ifa_A          296 SDGVAALQGWLN----------------SEGHRKNLLNEQFTGLGVGVYD  329 (339)
T ss_dssp             SSHHHHHHHHHT----------------SHHHHHHHTCTTCCEEEEEEET
T ss_pred             CCHHHHHHHHhC----------------CHhHHHHHhCCCCCEEEEEEEe
Confidence            478899999984                3689999999999999999973

>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}

Probab=99.46  E-value=3.1e-13  Score=105.32  Aligned_cols=94  Identities=12%  Similarity=0.146  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCC----------------CCccceEEeccCCCC
Q 031070           29 SLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSN----------------GPYGENIFWGSGNGW   92 (166)
Q Consensus        29 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~----------------~~~Gen~~~~~~~~~   92 (166)
                      ...+.||++.|.+|...+++||.||+.|+..|+.||..|+......|.+                ..+|||++.+.   .
T Consensus       204 ~~e~~il~liN~~R~~~GL~pL~~d~~L~~aA~~ha~dma~~~~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~---~  280 (323)
T 4h0a_A          204 NQLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAF---N  280 (323)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHTC------CCCHHHHHHHHHHTTCCCSEEEEEEEESC---C
T ss_pred             HHHHHHHHHHHHHHHHcCCcccCccHhHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCC---C
Confidence            4567899999999999999999999999999999999998654433333                14689999886   5


Q ss_pred             CHHHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEE
Q 031070           93 TPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVT  141 (166)
Q Consensus        93 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~  141 (166)
                      ++..+++.|++                ..||..+|+..+.++||+|+..
T Consensus       281 ~~~~vv~~Wmn----------------SpgHR~NiL~~~~t~iGvGv~~  313 (323)
T 4h0a_A          281 DVPTLIHSWMN----------------SDIHRSRLLNSKYDEMGGDVMR  313 (323)
T ss_dssp             SHHHHHHHHHT----------------SHHHHHHHTCSSCCEEEEEEET
T ss_pred             CHHHHHHHHHc----------------CHHHHHHHcCCCCCEEEEEEEc
Confidence            78999999984                3579999999999999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	166
d1cfea_	135	d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1	5e-33
d1qnxa_	209	d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jac	2e-31
d1rc9a1	164	d.111.1.1 (A:1-164) Cysteine-rich secretory protei	1e-30
d1smba_	149	d.111.1.1 (A:) Golgi-associated PR-1 protein {Huma	2e-27

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]} Length = 135

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

 Score =  112 bits (280), Expect = 5e-33
 Identities = 66/134 (49%), Positives = 84/134 (62%), Gaps = 4/134 (2%)

Query: 33  QFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGW 92
            +L   N AR  + + PM WD NLA  AQ YAN R  DC L HS    GEN+  G G+ +
Sbjct: 6   DYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSG--AGENLAKGGGD-F 62

Query: 93  TPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITC 152
           T   AV  W+SE+ SY+Y +N C GG++C HYTQVV   + R+GC +  C  G   FI+C
Sbjct: 63  TGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNG-WWFISC 121

Query: 153 NYDPPGNYIGERPY 166
           NYDP GN+IG+RPY
Sbjct: 122 NYDPVGNWIGQRPY 135

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]} Length = 209

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

 Score =  110 bits (275), Expect = 2e-31
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 8/131 (6%)

Query: 44  ALRMRPMQWDPNLARYAQQYANKRRYDCELKHS--NGPYGENIFWGSGNGW---TPAQAV 98
           A  M+ + W+  LA  AQ +AN+ +Y  +          G+N+            P + V
Sbjct: 76  AKNMKNLVWNDELAYVAQVWANQCQYGHDTCRDVAKYQVGQNVALTGSTAAKYDDPVKLV 135

Query: 99  MAWISEKKSYDYWSNS-CSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRG--VFITCNYD 155
             W  E K Y+       +   + GHYTQ+V + T+ VGC  +     +    ++ CNY 
Sbjct: 136 KMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYG 195

Query: 156 PPGNYIGERPY 166
           P GN+  E  Y
Sbjct: 196 PSGNFKNEELY 206

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]} Length = 164

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

 Score =  106 bits (266), Expect = 1e-30
 Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 13/150 (8%)

Query: 29  SLANQFLVPQNAAR-----YALRMRPMQWDPNLARYAQQYANKRRYDCELKHSN----GP 79
            + N+ +   N+ R      A  M  M+W P  A  A+++A +         S       
Sbjct: 13  EIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYESRVIEGIK 72

Query: 80  YGENIFWGSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAK 139
            GENI+            + AW  E K + Y   +       GHYTQ+V  ++ R+GCA 
Sbjct: 73  CGENIYMSPY-PMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAA 131

Query: 140 VTCF-GGRGVFITCNYDPPGNYIGE--RPY 166
             C       F  C Y P GN+IG+   PY
Sbjct: 132 AYCPSSPYSYFFVCQYCPAGNFIGKTATPY 161

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.4 bits (244), Expect = 2e-27
 Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 8/140 (5%)

Query: 31  ANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELK----HSNGPYGENIFW 86
            N+ L   N  R    + P++   NL R AQQY+        LK     S G  GEN+ W
Sbjct: 7   HNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAW 66

Query: 87  GSGNGWTPAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGR 146
            S +     +    W SE K+Y++     + G   GH+T +V   T+++G  K +   G 
Sbjct: 67  ASYDQT-GKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDG- 122

Query: 147 GVFITCNYDPPGNYIGERPY 166
             F+   Y P GN + E  +
Sbjct: 123 SSFVVARYFPAGNVVNEGFF 142

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	166
d1cfea_	135	Pathogenesis-related protein 1 (PR1) {Tomato (Lyco	100.0
d1smba_	149	Golgi-associated PR-1 protein {Human (Homo sapiens	100.0
d1rc9a1	164	Cysteine-rich secretory protein (SteCRISP) {Chines	100.0
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	100.0

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

Probab=100.00  E-value=1.4e-44  Score=249.09  Aligned_cols=134  Identities=49%  Similarity=0.908  Sum_probs=122.3

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCCCCccceEEeccCCCCCHHHHHHHHHhhhccC
Q 031070           29 SLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSNGPYGENIFWGSGNGWTPAQAVMAWISEKKSY  108 (166)
Q Consensus        29 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~~~Gen~~~~~~~~~~~~~~v~~W~~e~~~y  108 (166)
                      +++++||+.||.+|+.++|+||+||++|++.||.||++++..|...|+  ..|||++... .+.++.++++.|++|..+|
T Consensus         2 ~~~q~~l~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~~~~~~~~~~--~~GeNi~~~~-~~~~~~~av~~W~~E~~~y   78 (135)
T d1cfea_           2 NSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS--GAGENLAKGG-GDFTGRAAVQLWVSERPSY   78 (135)
T ss_dssp             CSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSC--SSSBCCEECS-SSCCHHHHHHHHHTTGGGE
T ss_pred             CcHHHHHHHHHHHHHHcCCCcCEECHHHHHHHHHHHHHHhhCCCcccC--ccccceeccC-CCCCHHHHHHHHHhhcccc
Confidence            457889999999999999999999999999999999888887876665  5799999876 5678999999999999999


Q ss_pred             CcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEecCCCCCCCCCCC
Q 031070          109 DYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY  166 (166)
Q Consensus       109 ~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  166 (166)
                      +|..+.+.....++|||||||+++++||||++.|+++ ..++||+|+|+||+.|++||
T Consensus        79 ~~~~~~~~~~~~~ghftQmvW~~t~~vGCa~~~c~~~-~~~vVC~Y~P~GN~~g~~pY  135 (135)
T d1cfea_          79 NYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNG-WWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             EGGGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTS-SEEEEEECSSCCSCTTSCCC
T ss_pred             ccccccCCCCcccchhheeeehhheEeeEEEEEECCC-CEEEEEEEeCCCCcCCcCCC
Confidence            9998887777789999999999999999999999886 67899999999999999999

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-41  Score=238.04  Aligned_cols=135  Identities=31%  Similarity=0.498  Sum_probs=123.3

Q ss_pred             hHHHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhhhcCCccccCC----CCccceEEeccCCCCCHHHHHHHHHh
Q 031070           28 WSLANQFLVPQNAARYALRMRPMQWDPNLARYAQQYANKRRYDCELKHSN----GPYGENIFWGSGNGWTPAQAVMAWIS  103 (166)
Q Consensus        28 ~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~----~~~Gen~~~~~~~~~~~~~~v~~W~~  103 (166)
                      .+++++||+.||.+|++++++||+||++|++.|+.||++|+++|.+.|++    ..+|||++.+. .+..+.++|+.|++
T Consensus         4 ~~f~~~il~~HN~~R~~~g~~pL~wd~~La~~A~~~A~~~a~~~~~~h~~~~~~~~~geni~~~~-~~~~~~~~v~~W~~   82 (149)
T d1smba_           4 KQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWYS   82 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHTTSSEEEEEEES-SCCCHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHhhcccccccccccccccccCceeeecC-CCccHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999998875    46899999876 44578999999999


Q ss_pred             hhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCCCeEEEEEEecCCCCCCCCCCC
Q 031070          104 EKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGGRGVFITCNYDPPGNYIGERPY  166 (166)
Q Consensus       104 e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  166 (166)
                      |..+|+|..+.+..  .++|||||||.++++||||++.|+++ ..++||+|+|+||+.|+++|
T Consensus        83 e~~~y~~~~~~~~~--~~ghftqmvw~~t~~vGCg~a~c~~~-~~~~VC~Y~p~GN~~~~~~y  142 (149)
T d1smba_          83 EIKNYNFQQPGFTS--GTGHFTAMVWKNTKKMGVGKASASDG-SSFVVARYFPAGNVVNEGFF  142 (149)
T ss_dssp             GGGGCCTTSCCCCG--GGHHHHHHHCTTCCEEEEEEEECTTS-CEEEEEEEESCCCCCSTTHH
T ss_pred             HHhhcccCCCCccc--ccchhhheecCCceEeeEEEEEcCCC-CEEEEEEeeCCCCcCCcccc
Confidence            99999998887754  58999999999999999999999885 57899999999999999876

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

Probab=100.00  E-value=2.1e-39  Score=229.82  Aligned_cols=135  Identities=33%  Similarity=0.603  Sum_probs=119.2

Q ss_pred             ChHHHHHHHHHHHHHHhhCC-----CCCCcccHHHHHHHHHHHHhhhcCCccccCC--------CCccceEEeccCCCCC
Q 031070           27 YWSLANQFLVPQNAARYALR-----MRPMQWDPNLARYAQQYANKRRYDCELKHSN--------GPYGENIFWGSGNGWT   93 (166)
Q Consensus        27 ~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~--------~~~Gen~~~~~~~~~~   93 (166)
                      +.+++++||+.||.+|++++     |.+|+||.+|++.|+.||    +.|...|+.        ...|||++... ....
T Consensus        11 ~~~~~~~il~~HN~~R~~~~~~a~~m~~L~Wd~~La~~A~~~a----~~c~~~~~~~~~~~~~~~~~g~n~~~~~-~~~~   85 (164)
T d1rc9a1          11 KPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWA----YRCIESHSSYESRVIEGIKCGENIYMSP-YPMK   85 (164)
T ss_dssp             SHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHH----TTTCCSCCCGGGGEETTEECEEEEEEES-SCCC
T ss_pred             CHHHHHHHHHHHHHHHHHcCCCcccccccccCHHHHHHHHHHH----HHHhhccCCcccccccccccceEEEEec-CCCC
Confidence            67899999999999999998     667999999999999999    888777654        26788888766 4467


Q ss_pred             HHHHHHHHHhhhccCCcCCCCCCCCcccchHHHHHHhcCCeEEEEEEEeCCC-CeEEEEEEecCCCCCCCC--CCC
Q 031070           94 PAQAVMAWISEKKSYDYWSNSCSGGQQCGHYTQVVRSRTRRVGCAKVTCFGG-RGVFITCNYDPPGNYIGE--RPY  166 (166)
Q Consensus        94 ~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmiw~~~~~vGCa~~~c~~~-~~~~~vC~Y~p~gn~~g~--~~Y  166 (166)
                      +.++|+.|++|..+|++....+..+..++|||||||+++++||||++.|.++ ...++||+|+|+||+.|+  +||
T Consensus        86 ~~~~v~~W~~E~~~~~~~~~~~~~~~~~ghftqmvW~~t~~vGCa~~~c~~~~~~~~vVC~Y~P~GN~~g~~~~~Y  161 (164)
T d1rc9a1          86 WTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPY  161 (164)
T ss_dssp             HHHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTCTTCSS
T ss_pred             HHHHHHHHhhhhheeecCCCCCCCcchhhHHHHHhhhcccEEeEEEEEeCCCCceEEEEEEEcCCCccCCCcCCCc
Confidence            8999999999999999988877777789999999999999999999999876 457899999999999997  667

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=100.00  E-value=1.7e-38  Score=233.20  Aligned_cols=138  Identities=28%  Similarity=0.480  Sum_probs=119.0

Q ss_pred             CCChHHHHHHHHHHHHHHhhCC-----------------CCCCcccHHHHHHHHHHHHhhhcCCccccCC------CCcc
Q 031070           25 SNYWSLANQFLVPQNAARYALR-----------------MRPMQWDPNLARYAQQYANKRRYDCELKHSN------GPYG   81 (166)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~------~~~G   81 (166)
                      .+++++|+.||+.||.+|++++                 |.+|+||++||..||.||    ++|...|+.      ..+|
T Consensus        40 ~~t~~~r~~iL~~HN~~R~~vA~G~~~~~~~~~~P~A~~M~~L~Wd~eLa~~A~~~a----~~C~~~~~~~~~~~~~~~G  115 (209)
T d1qnxa_          40 GLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWA----NQCQYGHDTCRDVAKYQVG  115 (209)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHH----TTCCCSCCSCCCCSSSCCE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcccccccccCCCCccccCccceECHHHHHHHHHHH----hhcccCCCcccCCCCCCCc
Confidence            4688999999999999999862                 788999999999999999    889887754      2679


Q ss_pred             ceEEecc---CCCCCHHHHHHHHHhhhccCCcCCCCCCC-CcccchHHHHHHhcCCeEEEEEEEeCCC--CeEEEEEEec
Q 031070           82 ENIFWGS---GNGWTPAQAVMAWISEKKSYDYWSNSCSG-GQQCGHYTQVVRSRTRRVGCAKVTCFGG--RGVFITCNYD  155 (166)
Q Consensus        82 en~~~~~---~~~~~~~~~v~~W~~e~~~y~~~~~~~~~-~~~~~~f~qmiw~~~~~vGCa~~~c~~~--~~~~~vC~Y~  155 (166)
                      ||++...   .....+.++|+.|++|...|++....... +..++|||||||+++++||||++.|..+  ...++||+|+
T Consensus       116 en~~~~~~~~~~~~~~~~~v~~W~~E~~~~~~~~~~~~~~~~~~ghftQmvw~~t~~VGCa~~~c~~~~~~~~~vVC~Y~  195 (209)
T d1qnxa_         116 QNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYG  195 (209)
T ss_dssp             EEEEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             ceeeecccCCcCcccHHHHHHHHHHHhhhcCCCcccccCCccccchhHHHhhhhhCEEeEEEEEEcCCCCCEEEEEEEEC
Confidence            9998765   23457889999999999999987765433 3468999999999999999999999765  4578999999


Q ss_pred             CCCCCCCCCCC
Q 031070          156 PPGNYIGERPY  166 (166)
Q Consensus       156 p~gn~~g~~~Y  166 (166)
                      |+||+.|++||
T Consensus       196 p~GN~~g~~~Y  206 (209)
T d1qnxa_         196 PSGNFKNEELY  206 (209)
T ss_dssp             SCCCCTTSCSS
T ss_pred             CCCCCCCCCCC
Confidence            99999999999