Citrus Sinensis ID: 031075

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHccccccccEEEcccccccHHHHHHHHcccccccccccccccccEEEEcccccEEEEEcccccccccccccccccccccccccccEEccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHHHccccccccccccEEEEEEcccccEEEEccccccccccccccccccccccccccccEEEcccccccccc
Coil and Loop (DISEMBL)
mdrvrrpdrsdvhlsreeEAKMEDEVRENfenlapkrhtkpqrsdyssqyvdafangsdsnqeySQFQHLqandsqkliwngsevteefqeteyykdlnrinkdhhttgtgfikmenangksfilapdnddahhssckgnpatnewipsaddsvvfssdkpkrsen
Flexible Loop (DISEMBL)
mdrvrrpdrsdvhlsreeeakmedevrenfenlapkrhtkpqrsdyssQYVDAFANGSDSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPatnewipsaddsvvfssdkpkrsen
Low Complexity Region (SEG)
MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN
Disordered region (IsUnstruct)
****************************************************************************KLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMEN*****FI******************************************
Disordered Region (DISOPRED)
***********************DEVRENFENLA*************************SNQEYSQF****************EVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILA************GNPATNEWIPSADDS*************
Disordered Region (DISEMBL)
*************LSREEEAKMEDEVRENFENLAPK**********SSQYVDAFANGSDSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSV************
Disordered Region (DISPRO)
***********************DEVRENFENLAPK**********************DSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDND**HHSSCKGNPATNEWIPSADDSVVFS*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
255558834	166	conserved hypothetical protein [Ricinus	0.993	0.993	0.622	3e-54
300432698	169	conserved hypothetical protein 9 [Hevea	0.963	0.946	0.636	6e-52
300432702	169	conserved hypothetical protein 11 [Hevea	0.963	0.946	0.624	7e-52
356566203	169	PREDICTED: uncharacterized protein LOC10	0.987	0.970	0.602	3e-50
225434704	166	PREDICTED: uncharacterized protein LOC10	0.993	0.993	0.622	3e-47
300432700	166	conserved hypothetical protein 10 [Hevea	0.921	0.921	0.620	5e-47
388511711	167	unknown [Lotus japonicus]	0.981	0.976	0.6	8e-47
351734542	171	uncharacterized protein LOC100306349 [Gl	0.987	0.959	0.578	2e-46
224106331	168	predicted protein [Populus trichocarpa]	0.993	0.982	0.597	9e-45
217070972	166	unknown [Medicago truncatula]	0.969	0.969	0.590	4e-43

>gi|255558834|ref|XP_002520440.1| conserved hypothetical protein [Ricinus communis] gi|223540282|gb|EEF41853.1| conserved hypothetical protein [Ricinus communis]

 Score =  216 bits (549), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 104/167 (62%), Positives = 128/167 (76%), Gaps = 2/167 (1%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+  RRP+RSD+H++ EEE ++E E R++F+ LAPKRHTKPQRS+YSSQY DA       
Sbjct: 1   MECYRRPNRSDIHMTMEEEVRIEAETRDHFDGLAPKRHTKPQRSEYSSQYADANPLHPTF 60

Query: 61  NQEYSQFQHLQANDSQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENAN 119
             E+ +FQ LQ  D QKL +NG  E  +EF ETEYY+DLN I+K HHTTGTGFIKMENAN
Sbjct: 61  TPEFLEFQRLQ-TDPQKLRYNGKGEAGQEFAETEYYEDLNCIDKQHHTTGTGFIKMENAN 119

Query: 120 GKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 166
           GK F LAPD+    H+SCKGNPATN+WIP+A D+  F+SDKPKRS+N
Sbjct: 120 GKGFTLAPDSVTCCHASCKGNPATNDWIPAAADTATFASDKPKRSDN 166

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300432698|gb|ADK13066.1| conserved hypothetical protein 9 [Hevea brasiliensis]

 Score =  208 bits (529), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 105/165 (63%), Positives = 129/165 (78%), Gaps = 5/165 (3%)

Query: 6   RPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDA--FANGSDSN-Q 62
           RP RSD+HLS EEEAK+++E +E F+ LA KRH+KPQRS++S+QYVDA  F N   S+  
Sbjct: 6   RPHRSDIHLSAEEEAKIQEETKEYFDGLAAKRHSKPQRSEFSAQYVDALPFTNSLPSSIP 65

Query: 63  EYSQFQHLQANDSQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGK 121
           E  +FQ L+ ND QKL+ NG  +V E+F ETEYYKDLN I+K HHTTGTGFIKMEN NGK
Sbjct: 66  ELVKFQRLE-NDPQKLVCNGNGQVGEDFVETEYYKDLNCIDKKHHTTGTGFIKMENINGK 124

Query: 122 SFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 166
           SF LAPD     H+SC+GNPATNEWIP+A ++V  +SDKPKRS+N
Sbjct: 125 SFSLAPDPVSCCHASCRGNPATNEWIPAAANTVTLASDKPKRSDN 169

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300432702|gb|ADK13068.1| conserved hypothetical protein 11 [Hevea brasiliensis]

 Score =  208 bits (529), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 103/165 (62%), Positives = 128/165 (77%), Gaps = 5/165 (3%)

Query: 6   RPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFA---NGSDSNQ 62
           RP RSD+HL+ EEEAK+++E +E F+ LA KRH+KPQRS++S+QYVDAF    +   S  
Sbjct: 6   RPHRSDIHLAAEEEAKIQEETKEYFDGLAAKRHSKPQRSEFSAQYVDAFPFTNSLPSSIP 65

Query: 63  EYSQFQHLQANDSQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGK 121
           E  +FQ L+ ND QKL+ NG  +V E+F ETEYYKDLN I+K HHTTGTGFIKMEN NGK
Sbjct: 66  ELVEFQRLE-NDPQKLVCNGNGQVGEDFVETEYYKDLNCIDKKHHTTGTGFIKMENINGK 124

Query: 122 SFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 166
           SF LAPD     H+SC+GNPATNEWIP+A ++V  +SDKPKRS+N
Sbjct: 125 SFSLAPDPVSCCHASCRGNPATNEWIPAAANTVTLASDKPKRSDN 169

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566203|ref|XP_003551324.1| PREDICTED: uncharacterized protein LOC100811254 [Glycine max]

 Score =  202 bits (514), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 103/171 (60%), Positives = 128/171 (74%), Gaps = 7/171 (4%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+   RP+RSD+HLS EEEA +E + RE F+ +AP+RHTKPQRSDYS+QYVDAF+N   S
Sbjct: 1   MECYTRPNRSDIHLSAEEEATIEAKTREYFDGVAPQRHTKPQRSDYSAQYVDAFSNAHHS 60

Query: 61  N---QEYSQFQHLQANDSQ--KLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKM 115
           +    E +QFQ LQ ND Q  KL++NGS+V EEF ETEYY+DLN ++K HHTTGTGFIK+
Sbjct: 61  SLTIPELTQFQLLQ-NDPQEKKLVYNGSQVPEEFVETEYYQDLNSVDKHHHTTGTGFIKV 119

Query: 116 ENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 166
           E  NG  F + PDND   H SCKGNPATN+W+P+    V F+S KP RS+N
Sbjct: 120 EK-NGNDFHIEPDNDTGCHHSCKGNPATNDWVPAPSTEVGFNSGKPNRSDN 169

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434704|ref|XP_002280988.1| PREDICTED: uncharacterized protein LOC100258718 [Vitis vinifera] gi|297745958|emb|CBI16014.3| unnamed protein product [Vitis vinifera]

 Score =  193 bits (490), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/167 (62%), Positives = 133/167 (79%), Gaps = 2/167 (1%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+   RP+RSDVHL++EE A++E+E R+ F+ +APKRH KP RS++SSQYVD  ++    
Sbjct: 1   MECCGRPNRSDVHLTQEEAARIEEETRDYFDGIAPKRHAKPSRSEHSSQYVDPPSDRQHE 60

Query: 61  N-QEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENAN 119
           +  E+ +FQHL+ ND QKL+++GSEVTEEF ETEYY+DLN I+K HHTTGTGFIKMENA+
Sbjct: 61  DIPEFLKFQHLE-NDPQKLVYSGSEVTEEFVETEYYQDLNCIDKQHHTTGTGFIKMENAD 119

Query: 120 GKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 166
           GKSF LA ++     +SCKGNPATN+WIP+A D V FSSDKP RSEN
Sbjct: 120 GKSFNLAANSATCCQASCKGNPATNDWIPAAADKVAFSSDKPNRSEN 166

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300432700|gb|ADK13067.1| conserved hypothetical protein 10 [Hevea brasiliensis]

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 98/158 (62%), Positives = 121/158 (76%), Gaps = 5/158 (3%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDA--FANGS 58
           M+   RP RSD+HLS EEEAK+++E +E F+ LA KRH+KPQRS++S+QYVDA  F N  
Sbjct: 1   MEFHGRPHRSDIHLSAEEEAKIQEETKEYFDGLAAKRHSKPQRSEFSAQYVDALPFTNSL 60

Query: 59  DSN-QEYSQFQHLQANDSQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKME 116
            S+  E  +FQ L+ ND QKL+ NG  +V E+F ETEYYKDLN I+K HHTTGTGFIKME
Sbjct: 61  PSSIPELVKFQRLE-NDPQKLVCNGNGQVGEDFVETEYYKDLNCIDKKHHTTGTGFIKME 119

Query: 117 NANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSV 154
           N NGKSF LAPD     H+SC+GNPATNEWIP+A ++V
Sbjct: 120 NINGKSFSLAPDPVSCCHASCRGNPATNEWIPAAANTV 157

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511711|gb|AFK43917.1| unknown [Lotus japonicus]

 Score =  191 bits (485), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 102/170 (60%), Positives = 124/170 (72%), Gaps = 7/170 (4%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANG--S 58
           M+   RP+RSD HLS EEEA +E + RE FE  APKRHTKPQRS+YSSQYVD   NG  +
Sbjct: 1   MECCGRPNRSDSHLSAEEEATIEAQTREYFEEGAPKRHTKPQRSEYSSQYVDNI-NGVSN 59

Query: 59  DSNQEYSQFQHLQANDSQ--KLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKME 116
           DS  E  QFQ L+ ND Q  KL++NG++V EEF ETEYYKDLN ++K HHTTG GFI+++
Sbjct: 60  DSTPEMLQFQRLE-NDPQEKKLVYNGNQVAEEFVETEYYKDLNNVDKHHHTTGKGFIQVD 118

Query: 117 NANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 166
            + G  F + PDND  HH S KGNPATNEW+P+     VF+SDKP RS+N
Sbjct: 119 KS-GTGFHIEPDNDTGHHHSSKGNPATNEWVPAPSTEDVFNSDKPSRSDN 167

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351734542|ref|NP_001237416.1| uncharacterized protein LOC100306349 [Glycine max] gi|255628273|gb|ACU14481.1| unknown [Glycine max]

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/173 (57%), Positives = 127/173 (73%), Gaps = 9/173 (5%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+   RP+RSD+HLS EEEA +E + R+ F+ +AP+RHTKPQRS+YS+Q VDAF+N   S
Sbjct: 1   MEFYTRPNRSDIHLSAEEEATIEAKTRDYFDGVAPQRHTKPQRSEYSAQNVDAFSNAHHS 60

Query: 61  NQ-----EYSQFQHLQANDSQ--KLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFI 113
           +      E+ QFQ L+ ND Q  KL +NGS+V EEF ETEYY+DLN ++K HHTTGTGFI
Sbjct: 61  SSSSSIPEFMQFQRLE-NDPQEKKLEYNGSQVPEEFVETEYYQDLNSVDKHHHTTGTGFI 119

Query: 114 KMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 166
           K+E  NG  F + PDND   H SCK NPATN+W+PS  + V F+SDKP RS+N
Sbjct: 120 KVE-KNGNDFHIEPDNDTGCHHSCKCNPATNDWVPSPSNEVGFNSDKPNRSDN 171

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106331|ref|XP_002314132.1| predicted protein [Populus trichocarpa] gi|222850540|gb|EEE88087.1| predicted protein [Populus trichocarpa]

 Score =  184 bits (468), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 101/169 (59%), Positives = 125/169 (73%), Gaps = 4/169 (2%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+  +RP+RSD H+S EEEAK E+E R  FE +APKRH+KPQRS+YS QYVD      D 
Sbjct: 1   MEFHKRPNRSDAHVSVEEEAKQEEETRGYFEGIAPKRHSKPQRSEYSIQYVDTLTTNGDQ 60

Query: 61  --NQEYSQFQHLQANDSQKLIWN-GSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMEN 117
             N EY +FQ L+  D QK+I N  S+VT+EF ETEYY+DLN ++K HHTTGTGFIK EN
Sbjct: 61  SFNPEYVEFQRLET-DPQKIISNESSKVTDEFVETEYYQDLNCVDKQHHTTGTGFIKTEN 119

Query: 118 ANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 166
             GK F LAPD+  + H+SCKGNPATN+W+P+  D V  +SDKPKRS+N
Sbjct: 120 EYGKRFSLAPDSTSSCHASCKGNPATNDWVPADADMVTSASDKPKRSDN 168

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217070972|gb|ACJ83846.1| unknown [Medicago truncatula]

 Score =  179 bits (453), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/171 (59%), Positives = 130/171 (76%), Gaps = 10/171 (5%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSD- 59
           M+ VRRP+RSD HLS EEEA +E + R +FE +APKRHTKPQRS+Y+SQYVD+  N SD 
Sbjct: 1   MEDVRRPNRSDTHLSAEEEASIEAKTRHHFEEVAPKRHTKPQRSEYASQYVDS--NVSDN 58

Query: 60  SNQEYSQFQHLQANDSQ--KLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMEN 117
           S  E  QFQ L+ ND Q  KL+++G+EV+EEF ETEYYKDLN ++K HHTTG GFI++E 
Sbjct: 59  SVPEMLQFQRLE-NDPQEKKLVYDGNEVSEEFVETEYYKDLNSVDKHHHTTGKGFIQVEK 117

Query: 118 ANGKSFILAPDND--DAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 166
           ++  SF + PDND  D+HHS+ KGNPATN+W+P+       +SDKP RS+N
Sbjct: 118 SDT-SFHIEPDNDTHDSHHST-KGNPATNDWVPAPFTEEDTNSDKPNRSDN 166

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
TAIR|locus:2115189	173	MEE59 "AT4G37300" [Arabidopsis	0.969	0.930	0.386	2e-24

TAIR|locus:2115189 MEE59 "AT4G37300" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 65/168 (38%), Positives = 97/168 (57%)

Query:     6 RPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYS 65
             +P RSD     E++ K  +++R +F++LAPKR TKP RS+       + ++    + E  
Sbjct:     5 KPSRSDEISDPEQQIKNANQIRADFDSLAPKRPTKPTRSEPGFPGSFSASDKITDHPEAD 64

Query:    66 QFQHLQANDSQKLIWNG--SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKM-ENANGK- 121
             +FQ LQ+    K++  G  S V +EF ETEYY +L  I+K HHTTG+GFI + +  NG+ 
Sbjct:    65 KFQSLQSQTHGKVLGEGDSSAVQDEFLETEYYSNLTAIDKQHHTTGSGFINVVKEDNGEE 124

Query:   122 --SFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVF-SSDKPKRSEN 166
               +   A   D    +  + NPATNEWIP+ ++     SS KP RSE+
Sbjct:   125 SEAVTAAAIGDGGEKAVYRSNPATNEWIPATEEDFDSESSSKPNRSES 172


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.308   0.125   0.361    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      166       166   0.00097  107 3  11 23  0.49    32
                                                     30  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  167 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.70u 0.17s 22.87t   Elapsed:  00:00:01
  Total cpu time:  22.70u 0.17s 22.87t   Elapsed:  00:00:01
  Start:  Fri May 10 09:59:11 2013   End:  Fri May 10 09:59:12 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00