Citrus Sinensis ID: 031146

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-----
Protein Sequence
MSMGCLGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Secondary Structure (PSIPRED)
ccccccccEEcccccccEEEcccEEEEEEEEEEEEccccEEccccccccccccccccccccEEEEEEEEcccEEEcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccEEEEEEcccccccEEEEEEcccccEEcc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHcccccEEccccEEEEEEcEEEEEccccEEcccccccccccccccccccEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHcHHcHHHHHHHHHHHHHHHHHHccccEEEEccccccccEEEEEEEcccccccEEEEEccccEEccc
Coil and Loop (DISEMBL)
msmgclgdellsdsfpykeiengilwevegkWVVQGAvdvdiganpsaegadedegvddqavKVVDIVDTfrlqeqpafdkKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQffvgesmhddgCLVFAYYkegatdptFLYIADALKEVKC
Flexible Loop (DISEMBL)
MSMGCLGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSaegadedegvddQAVKVVDIVDTfrlqeqpafdkkqfVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Low Complexity Region (SEG)
MSMGCLGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSaegadedegvddqavKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Disordered region (IsUnstruct)
******GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGA***************QAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAL*****
Disordered Region (DISOPRED)
***GCLGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGA*****************VKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLL****************EGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Disordered Region (DISEMBL)
MSMGCLGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANP**********VDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Disordered Region (DISPRO)
****CLGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANP************DQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSMGCLGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	165	2.2.26 [Sep-21-2011]
Q9ZSW9	168	Translationally-controlle	N/A	no	0.963	0.946	0.943	2e-82
Q5J907	168	Translationally-controlle	N/A	no	0.963	0.946	0.880	6e-79
Q2PS27	168	Translationally-controlle	N/A	no	0.963	0.946	0.849	6e-76
Q6DUX3	168	Translationally-controlle	N/A	no	0.963	0.946	0.842	9e-75
Q944T2	168	Translationally-controlle	no	no	0.963	0.946	0.855	4e-74
P43349	168	Translationally-controlle	N/A	no	0.963	0.946	0.836	4e-74
O03992	170	Translationally-controlle	N/A	no	0.963	0.935	0.850	3e-73
Q9XHL7	168	Translationally-controlle	N/A	no	0.963	0.946	0.811	1e-72
Q9M5G3	168	Translationally-controlle	N/A	no	0.963	0.946	0.811	2e-72
P50906	167	Translationally-controlle	N/A	no	0.957	0.946	0.817	4e-71

>sp|Q9ZSW9|TCTP_HEVBR Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1

 Score =  304 bits (778), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 150/159 (94%), Positives = 152/159 (95%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDG LVFAYY+ GATDPTFLY A ALKEVKC
Sbjct: 130 FFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168

Involved in calcium binding and microtubule stabilization.
Hevea brasiliensis (taxid: 3981)

>sp|Q5J907|TCTP_ELAGV Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1

 Score =  292 bits (748), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 140/159 (88%), Positives = 151/159 (94%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPSAEG +EDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDGCLVFAYYK+GATDPTFLY A  LKE+KC
Sbjct: 130 FFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168

Involved in calcium binding and microtubule stabilization.

Elaeis guineensis var. tenera (taxid: 51953)

>sp|Q2PS27|TCTP_CUCMA Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1

 Score =  282 bits (722), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 135/159 (84%), Positives = 146/159 (91%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKE+ENG++WEVEGKWVVQGAVDVDIGANPSAEG  EDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKFLL KL D +
Sbjct: 70  IVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFR 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDD C+VFAYY+EGATDPTFLY+A ALKEVKC
Sbjct: 130 FFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

Involved in calcium binding and microtubule stabilization.

Cucurbita maxima (taxid: 3661)

>sp|Q6DUX3|TCTP_SOLLC Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1

 Score =  278 bits (712), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 134/159 (84%), Positives = 144/159 (90%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKE+ENG+LWEV+GKWVVQGAVDV+IGANPSAEG  EDEGVDDQAV+VVD
Sbjct: 10  GDELLSDSFPYKEVENGVLWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGVDDQAVRVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E QE FKKNIE ATKFLL K+ DLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKFLLQKIKDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDG LVFAYYKEG+ DP FLYIA  LKE+KC
Sbjct: 130 FFVGESMHDDGALVFAYYKEGSADPPFLYIAPGLKEIKC 168

Involved in calcium binding and microtubule stabilization.

Solanum lycopersicum (taxid: 4081)

>sp|Q944T2|TCTP_SOYBN Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1

 Score =  276 bits (706), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 136/159 (85%), Positives = 145/159 (91%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSF YKEIENG+LWEVEGKWVV+GAVDVDIGANPSAEG  EDEGVDD AVKVVD
Sbjct: 10  GDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDAAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVT+MKRFIK LTPKL  E+QE+FKK+IEGATK+LLSK+ D Q
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKYLLSKIKDFQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESM DD CLVFAYYK+GA DPTFLY A ALKEVKC
Sbjct: 130 FFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168

Involved in calcium binding and microtubule stabilization.

Glycine max (taxid: 3847)

>sp|P43349|TCTP_SOLTU Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2

 Score =  276 bits (706), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 133/159 (83%), Positives = 143/159 (89%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDV+IGANPSAEG  EDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVTY+KR+IK LTPKL  E QE FKKNIE ATKFLLSKL D Q
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGE MHDD  LVFAYYK+G+ DPTFLY+A  LKE+KC
Sbjct: 130 FFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

Involved in calcium binding and microtubule stabilization.

Solanum tuberosum (taxid: 4113)

>sp|O03992|TCTP_FRAAN Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1

 Score =  273 bits (699), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 137/161 (85%), Positives = 145/161 (90%), Gaps = 2/161 (1%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADED--EGVDDQAVKV 64
           GDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDVDIGANPSAEGAD D  EGVDDQ VKV
Sbjct: 10  GDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEGADADADEGVDDQTVKV 69

Query: 65  VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSD 124
           VDIVDTFRLQEQP FDKKQFVT++KR+IKLLTPKL  E+QE FKKNIEGATKFLLSKLSD
Sbjct: 70  VDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSD 129

Query: 125 LQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           LQFFVGESM DD  LVFA YKEGATDP F+Y A  LKEVKC
Sbjct: 130 LQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170

Involved in calcium binding and microtubule stabilization.

Fragaria ananassa (taxid: 3747)

>sp|Q9XHL7|TCTP_TOBAC Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1

 Score =  271 bits (693), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 129/159 (81%), Positives = 145/159 (91%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDEL SDSF Y E+ NG+LWEV+GKWVVQGAVDV+IGANPSAEGADEDEGVDDQA+KVVD
Sbjct: 10  GDELPSDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEGADEDEGVDDQAIKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQP+FDKKQFV YMK++IK LTPKL  E++E+FK NI+GATK+LLSKLSDLQ
Sbjct: 70  IVDTFRLQEQPSFDKKQFVAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKYLLSKLSDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESM DD  +VFAYYK+GATDPTFLY+A  LKEVKC
Sbjct: 130 FFVGESMADDTGMVFAYYKDGATDPTFLYLAHGLKEVKC 168

Involved in calcium binding and microtubule stabilization.

Nicotiana tabacum (taxid: 4097)

>sp|Q9M5G3|TCTP_HORVU Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2

 Score =  270 bits (691), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 129/159 (81%), Positives = 141/159 (88%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPY+E+ENG+LWEV+G WVVQGAVDVDIGANPSAEG  EDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQF+ Y+KR+IK LT KL  E  + FKKN+E ATK+LLSKL DLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDG +VFAYY+EGA DPTFLY A  LKEVKC
Sbjct: 130 FFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168

Involved in calcium binding and microtubule stabilization.

Hordeum vulgare (taxid: 4513)

>sp|P50906|TCTP_PEA Translationally-controlled tumor protein homolog OS=Pisum sativum GN=TCTP PE=2 SV=2

 Score =  266 bits (681), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 130/159 (81%), Positives = 144/159 (90%), Gaps = 1/159 (0%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDS+PYKEIENG+LWEVEGKWVV+GAVDV+IGANPSAEG  EDEGVDD AVKVVD
Sbjct: 10  GDELLSDSYPYKEIENGMLWEVEGKWVVKGAVDVNIGANPSAEGG-EDEGVDDTAVKVVD 68

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVD FRLQEQP FDKKQF+ ++K++IKLLTPKL  E+QE FKKNIEGATK+LL KL DLQ
Sbjct: 69  IVDVFRLQEQPPFDKKQFLGFVKKYIKLLTPKLEAEKQEHFKKNIEGATKYLLGKLKDLQ 128

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDG LVFAYYK+GA DPTFLY + ALKE+KC
Sbjct: 129 FFVGESMHDDGSLVFAYYKDGAADPTFLYFSFALKEIKC 167

Involved in calcium binding and microtubule stabilization.

Pisum sativum (taxid: 3888)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
334854632	168	translationally controlled tumor protein	0.963	0.946	0.949	1e-81
9979196	168	RecName: Full=Translationally-controlled	0.963	0.946	0.943	1e-80
84314025	168	translationally controlled tumor protein	0.963	0.946	0.937	4e-80
386278572	168	translationally controlled tumor protein	0.963	0.946	0.930	5e-80
349891716	168	translationally controlled tumor protein	0.963	0.946	0.905	1e-78
115187479	168	translationally controlled tumor-like pr	0.963	0.946	0.893	1e-77
192912974	168	translationally controlled tumor protein	0.963	0.946	0.886	2e-77
75222628	168	RecName: Full=Translationally-controlled	0.963	0.946	0.880	3e-77
192910898	168	translationally controlled tumor protein	0.963	0.946	0.874	3e-76
449435639	168	PREDICTED: translationally-controlled tu	0.963	0.946	0.861	3e-76

>gi|334854632|gb|AEH05972.1| translationally controlled tumor protein [Hevea brasiliensis] gi|392514569|gb|AFM77714.1| TCTP.1 [Hevea brasiliensis]

 Score =  306 bits (785), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/159 (94%), Positives = 153/159 (96%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDG LVFAYY+EGATDPTFLY A ALKEVKC
Sbjct: 130 FFVGESMHDDGSLVFAYYREGATDPTFLYFAYALKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9979196|sp|Q9ZSW9.1|TCTP_HEVBR RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP gi|4193388|gb|AAD10032.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/159 (94%), Positives = 152/159 (95%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDG LVFAYY+ GATDPTFLY A ALKEVKC
Sbjct: 130 FFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|84314025|gb|ABC55649.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  302 bits (773), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 149/159 (93%), Positives = 151/159 (94%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEI NGILWEV GKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKEIHNGILWEVVGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTP L EE+QE FKKNIEGATKFLLSKLSDLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPMLDEEKQESFKKNIEGATKFLLSKLSDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDG LVFAYY+EGATDPTFLY A ALKEVKC
Sbjct: 130 FFVGESMHDDGSLVFAYYREGATDPTFLYFAYALKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|386278572|gb|AFJ04518.1| translationally controlled tumor protein [Vernicia fordii]

 Score =  301 bits (772), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 148/159 (93%), Positives = 152/159 (95%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEI NG+LWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKEIHNGMLWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVTYMKRFIKLLT KL EE+QE FKKNIEGATKFLLSKLSDLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTAKLDEEKQESFKKNIEGATKFLLSKLSDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDD CLVFA+YK+GATDPTFLY A ALKEVKC
Sbjct: 130 FFVGESMHDDACLVFAFYKDGATDPTFLYFAYALKEVKC 168

Source: Vernicia fordii

Species: Vernicia fordii

Genus: Vernicia

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|349891716|gb|AEQ20639.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  297 bits (760), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 144/159 (90%), Positives = 152/159 (95%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEIENG+LWEVEGKWVVQGA+DVDIGANPSAEG +EDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGGEEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVTYMKR+IKLLTPKL  E+QE+FKK+IEGATKFLLSKL DLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTYMKRYIKLLTPKLEPEKQELFKKHIEGATKFLLSKLIDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDG LVFAYYKEGATDPTFLY+A  LKEVKC
Sbjct: 130 FFVGESMHDDGSLVFAYYKEGATDPTFLYLAYGLKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115187479|gb|ABI84255.1| translationally controlled tumor-like protein [Arachis hypogaea]

 Score =  293 bits (751), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 142/159 (89%), Positives = 149/159 (93%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEIENGILWEVEGKWV+QGA++VDIGANPSAEG +EDE VDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKEIENGILWEVEGKWVIQGAINVDIGANPSAEGGEEDESVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVTYMKR+IKLLT KL  E+QE FKKNIEGATKFLLSKLSDLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTYMKRYIKLLTAKLEPEQQEHFKKNIEGATKFLLSKLSDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDG LVFAYYKEGATDPTFLY A  LKE+KC
Sbjct: 130 FFVGESMHDDGSLVFAYYKEGATDPTFLYFAHGLKEIKC 168

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192912974|gb|ACF06595.1| translationally controlled tumor protein [Elaeis guineensis]

 Score =  293 bits (749), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 141/159 (88%), Positives = 151/159 (94%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPSAEG +EDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDGCLVFAYYK+GATDPTFLY A  LKEVKC
Sbjct: 130 FFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEVKC 168

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75222628|sp|Q5J907.1|TCTP_ELAGV RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP gi|36963062|gb|AAQ87663.1| translationally controlled tumor protein [Elaeis guineensis] gi|306450591|gb|ADM88549.1| translationally controlled tumor protein [Elaeis guineensis]

 Score =  292 bits (748), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 140/159 (88%), Positives = 151/159 (94%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPSAEG +EDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDGCLVFAYYK+GATDPTFLY A  LKE+KC
Sbjct: 130 FFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192910898|gb|ACF06557.1| translationally controlled tumor protein [Elaeis guineensis]

 Score =  289 bits (740), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 139/159 (87%), Positives = 150/159 (94%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPYKEIENG+LWEVEGKWVVQGAV+VDIGANPSAEG +EDEGVDDQ  KVVD
Sbjct: 10  GDELLSDSFPYKEIENGMLWEVEGKWVVQGAVNVDIGANPSAEGGEEDEGVDDQTQKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATK+LLSKLSDLQ
Sbjct: 70  IVDTFRLQEQPAFDKKQFVTFMKRYIKQLTPKLDAEKQELFKKHIEGATKYLLSKLSDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGESMHDDG +VFAYYKEGATDPTFLY+A  LKEVKC
Sbjct: 130 FFVGESMHDDGSMVFAYYKEGATDPTFLYLAYGLKEVKC 168

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435639|ref|XP_004135602.1| PREDICTED: translationally-controlled tumor protein homolog [Cucumis sativus] gi|449525492|ref|XP_004169751.1| PREDICTED: translationally-controlled tumor protein homolog [Cucumis sativus]

 Score =  289 bits (739), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 137/159 (86%), Positives = 150/159 (94%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVD 66
           GDELLSDSFPY EIENG+LWEVEGKWVVQGA+DVDIGANPSAEGADEDEGVDDQAVKVVD
Sbjct: 10  GDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGVDDQAVKVVD 69

Query: 67  IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
           IVDTFRLQEQP+FDKKQF+TYMKR+IKLLTPKL EE+QE+F+K+I  ATKFL+SK+ DLQ
Sbjct: 70  IVDTFRLQEQPSFDKKQFITYMKRYIKLLTPKLDEEKQELFRKHIPEATKFLISKIDDLQ 129

Query: 127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
           FFVGE MHDDG +VFAYYKEGATDPTF+YIA  LKEVKC
Sbjct: 130 FFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
TAIR|locus:2089378	168	TCTP "translationally controll	0.963	0.946	0.742	3.9e-60
TAIR|locus:2078052	168	AT3G05540 [Arabidopsis thalian	0.957	0.940	0.712	2.2e-57
DICTYBASE|DDB_G0282853	174	DDB_G0282853 "TCTP family prot	0.975	0.925	0.371	8.7e-24
POMBASE|SPAC1F12.02c	168	SPAC1F12.02c "translationally	0.927	0.910	0.355	3.5e-20
UNIPROTKB|Q6XIN1	172	Tctp "Translationally-controll	0.945	0.906	0.337	5.1e-19
FB|FBgn0037874	172	Tctp "Translationally controll	0.945	0.906	0.337	8.3e-19
MGI|MGI:104890	172	Tpt1 "tumor protein, translati	0.945	0.906	0.353	8.3e-19
RGD|621623	172	Tpt1 "tumor protein, translati	0.945	0.906	0.353	8.3e-19
SGD|S000001539	167	TMA19 "Protein that associates	0.848	0.838	0.367	2.2e-18
CGD|CAL0003369	167	TMA19 [Candida albicans (taxid	0.933	0.922	0.354	4.6e-18

TAIR|locus:2089378 TCTP "translationally controlled tumor protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 118/159 (74%), Positives = 128/159 (80%)

Query:     7 GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVD 66
             GDELLSDSFPYKEIENGILWEVEGKWV  GAVDV+IGANPS               KVVD
Sbjct:    10 GDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVD 69

Query:    67 IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
             IVDTFRLQEQP +DKK F+ Y+K++IKLLTPKLSEE Q +FKK IEGATKFLL +LSD Q
Sbjct:    70 IVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQ 129

Query:   127 FFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
             FFVGE MHDD  LVFAYYKEG+T+PTFLY A  LKEVKC
Sbjct:   130 FFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

GO:0005737 "cytoplasm" evidence=ISM;ISS

GO:0009579 "thylakoid" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0001558 "regulation of cell growth" evidence=IMP

GO:0009860 "pollen tube growth" evidence=IMP

GO:0010252 "auxin homeostasis" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0048527 "lateral root development" evidence=IMP

GO:0048768 "root hair cell tip growth" evidence=IMP

GO:0090406 "pollen tube" evidence=IDA

GO:0007346 "regulation of mitotic cell cycle" evidence=IMP

GO:0008283 "cell proliferation" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0009791 "post-embryonic development" evidence=IMP

GO:0040014 "regulation of multicellular organism growth" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0007067 "mitosis" evidence=RCA

GO:0009734 "auxin mediated signaling pathway" evidence=RCA

GO:0008017 "microtubule binding" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0031117 "positive regulation of microtubule depolymerization" evidence=IMP

GO:0090333 "regulation of stomatal closure" evidence=IMP

TAIR|locus:2078052 AT3G05540 [Arabidopsis thaliana (taxid:3702)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 114/160 (71%), Positives = 130/160 (81%)

Query:     7 GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVD 66
             GDELLSDSFPYKEIENG+LWEVEGKWVV+GA+D DIGANP                KVVD
Sbjct:    10 GDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEGGEDEGVDDQAV-KVVD 68

Query:    67 IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQ 126
             I+DTFRLQEQP+FDKKQFV +MKR+IK L+PKL  E QE+FKK+IE ATKFL+SKL D Q
Sbjct:    69 IIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKFLMSKLKDFQ 128

Query:   127 FFVGESMH-DDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
             FFVGESM  ++G LVFAYY+EGATDPTFLY+A  LKE+KC
Sbjct:   129 FFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

GO:0005737 "cytoplasm" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0282853 DDB_G0282853 "TCTP family protein 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 62/167 (37%), Positives = 92/167 (55%)

Query:     3 MGCLGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXXXXXXXXX 61
             +G   DEL SD++P  EI NG+++EV+ K V +   V V+ GAN +              
Sbjct:     8 VGYSHDELCSDAYPMTEINNGLIYEVQAKMVTIDLDVKVNTGANAASEETEEDEGVDNAG 67

Query:    62 XK-VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEE---RQEIFKKNIEGATKF 117
              K V+++VD  RL E  +FDKK +  Y+K ++K +  KL++    R + FKK+     K 
Sbjct:    68 SKQVINVVDAMRLVET-SFDKKSYTGYIKAYMKEVLAKLADNNPSRVDAFKKDAADFVKS 126

Query:   118 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 164
             +L K  + +F+ GE+M  DG +   YYK G  DP FLY  D L+ VK
Sbjct:   127 VLGKFDEYKFYTGENMDADGHVALMYYKPGEVDPIFLYFKDGLESVK 173

GO:0005737 "cytoplasm" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

POMBASE|SPAC1F12.02c SPAC1F12.02c "translationally controlled tumor protein homolog (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 58/163 (35%), Positives = 90/163 (55%)

Query:     7 GDELLSDSFPYKEIENGILWEVEGKWVV--QGAVDVDIGANPSXXXXXXXXXXXXXXXKV 64
             GDEL+SD++  KE+++ I++E + + V   QG  DVDIGANPS                V
Sbjct:    10 GDELVSDAYDLKEVDD-IVYEADCQMVTVKQGG-DVDIGANPSAEDAEENAEEGTET--V 65

Query:    65 VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSK 121
              ++V +FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+ 
Sbjct:    66 NNLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILAN 124

Query:   122 LSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 164
               D  F++GESM  D  +V   Y+E    P  ++  D L   K
Sbjct:   125 FKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167

GO:0002181 "cytoplasmic translation" evidence=NAS

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006412 "translation" evidence=ISO

UNIPROTKB|Q6XIN1 Tctp "Translationally-controlled tumor protein homolog" [Drosophila yakuba (taxid:7245)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 56/166 (33%), Positives = 88/166 (53%)

Query:     7 GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVV 65
             GDE+ +D++  K ++  +++EV GK + +   D+ + GAN S                 V
Sbjct:    10 GDEMFADTYKMKLVDE-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--V 66

Query:    66 DIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSK 121
             D+V   RLQE  AF DKK +  Y+K ++K +  KL E   ++ ++FK N+  A K +L +
Sbjct:    67 DVVLNHRLQECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMNKAMKDILGR 126

Query:   122 LSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYIADALKEVKC 165
               +LQFF GESM  DG +    Y+E  G + P  ++    L E KC
Sbjct:   127 FKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLDEEKC 172

GO:0005509 "calcium ion binding" evidence=ISS

GO:0045298 "tubulin complex" evidence=ISS

FB|FBgn0037874 Tctp "Translationally controlled tumor protein ortholog (H. sapiens)" [Drosophila melanogaster (taxid:7227)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 56/166 (33%), Positives = 89/166 (53%)

Query:     7 GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVV 65
             GDE+ +D++  K +++ +++EV GK + +   D+ + GAN S                 V
Sbjct:    10 GDEMFADTYKMKLVDD-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--V 66

Query:    66 DIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSK 121
             D+V   RL E  AF DKK +  Y+K ++K +  KL E   ++ +IFK N+  A K +L +
Sbjct:    67 DVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAMKDILGR 126

Query:   122 LSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYIADALKEVKC 165
               +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:   127 FKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLEEEKC 172

GO:0005737 "cytoplasm" evidence=NAS

GO:0045793 "positive regulation of cell size" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IDA

GO:0017016 "Ras GTPase binding" evidence=IPI

GO:0005088 "Ras guanyl-nucleotide exchange factor activity" evidence=IDA

MGI|MGI:104890 Tpt1 "tumor protein, translationally-controlled 1" [Mus musculus (taxid:10090)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 58/164 (35%), Positives = 85/164 (51%)

Query:     8 DELLSDSFPYKEIENGILWEVEGKWV--VQGAVDVD-IGANPSXXXXXXXXXXXXXXXKV 64
             DEL SD +  +EI +G+  EVEGK V   +GA+D   IG N S                V
Sbjct:    11 DELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEGPEGEGTESTVVTGV 70

Query:    65 VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSK 121
              DIV    LQE  +F K+ +  Y+K ++K L  KL E++ E  K  + GA    K +L+ 
Sbjct:    71 -DIVMNHHLQET-SFTKEAYKKYIKDYMKSLKGKLEEQKPERVKPFMTGAAEQIKHILAN 128

Query:   122 LSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
              ++ QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   129 FNNYQFFIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005615 "extracellular space" evidence=ISO

GO:0005654 "nucleoplasm" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005771 "multivesicular body" evidence=ISO

GO:0008134 "transcription factor binding" evidence=IPI

GO:0019827 "stem cell maintenance" evidence=IMP

GO:0043066 "negative regulation of apoptotic process" evidence=IDA

GO:2000384 "negative regulation of ectoderm development" evidence=IMP

RGD|621623 Tpt1 "tumor protein, translationally-controlled 1" [Rattus norvegicus (taxid:10116)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 58/164 (35%), Positives = 85/164 (51%)

Query:     8 DELLSDSFPYKEIENGILWEVEGKWV--VQGAVDVD-IGANPSXXXXXXXXXXXXXXXKV 64
             DEL SD +  +EI +G+  EVEGK V   +GA+D   IG N S                V
Sbjct:    11 DELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEGPEGEGTESTVVTGV 70

Query:    65 VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSK 121
              DIV    LQE  +F K+ +  Y+K ++K L  KL E++ E  K  + GA    K +L+ 
Sbjct:    71 -DIVMNHHLQET-SFTKEAYKKYIKDYMKSLKGKLEEQKPERVKPFMTGAAEQIKHILAN 128

Query:   122 LSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
              ++ QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   129 FNNYQFFIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005615 "extracellular space" evidence=ISO

GO:0005654 "nucleoplasm" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005771 "multivesicular body" evidence=ISO

GO:0007283 "spermatogenesis" evidence=IEP

GO:0008134 "transcription factor binding" evidence=ISO

GO:0008283 "cell proliferation" evidence=TAS

GO:0009615 "response to virus" evidence=ISO

GO:0019827 "stem cell maintenance" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:2000384 "negative regulation of ectoderm development" evidence=ISO

GO:0045298 "tubulin complex" evidence=ISO

SGD|S000001539 TMA19 "Protein that associates with ribosomes" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 54/147 (36%), Positives = 82/147 (55%)

Query:     8 DELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDI 67
             DELLSD++  K +++ +++E +   V  G  ++DIGANPS                V ++
Sbjct:    11 DELLSDAYDAKLVDD-VIYEADCAMVNVGGDNIDIGANPSAEGGDDDVEEGAEM--VNNV 67

Query:    68 VDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEER-QEI--FKKNIEGATKFLLSKLSD 124
             V +FRLQ Q AFDKK F+TY+K ++K +  KL E   +E+  F+K  +   K ++    D
Sbjct:    68 VHSFRLQ-QTAFDKKSFLTYIKGYMKAVKAKLQETNPEEVPKFEKGAQTYVKKVIGSFKD 126

Query:   125 LQFFVGESMHDDGCLVFAYYKEGATDP 151
              +FF GESM  D  +V   Y+E  T P
Sbjct:   127 WEFFTGESMDPDAMVVMLNYREDGTTP 153

GO:0003674 "molecular_function" evidence=ND

GO:0005829 "cytosol" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0006412 "translation" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005840 "ribosome" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=IMP

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0002181 "cytoplasmic translation" evidence=IMP

CGD|CAL0003369 TMA19 [Candida albicans (taxid:5476)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 57/161 (35%), Positives = 81/161 (50%)

Query:     7 GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVD 66
             GDELLSD++  K ++ G ++E +   V  G  D+DIGANPS                V +
Sbjct:    10 GDELLSDAYDVKLVD-GAVYEADCAMVTVGNGDIDIGANPSAEDGEEALEDGAET--VNN 66

Query:    67 IVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLS 123
             +V +FRLQ    FDKK F TY+K ++K +   L+E   +  E F+K      K +L    
Sbjct:    67 VVYSFRLQPT-MFDKKSFTTYIKGYMKRIKAYLAENDPDSVEAFEKGATAYVKKVLGSFK 125

Query:   124 DLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 164
             D +F+ GESM  D  +V   Y+E  T P        +KE K
Sbjct:   126 DWEFYTGESMDPDAMVVLLNYREDGTTPYVAIWKHGVKENK 166

GO:0003674 "molecular_function" evidence=ND

GO:0005840 "ribosome" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=IEA

GO:0002181 "cytoplasmic translation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6BP09	TCTP_DEBHA	No assigned EC number	0.4054	0.8545	0.8443	yes	no
P43347	TCTP_CHICK	No assigned EC number	0.3597	0.9454	0.9069	yes	no
P35681	TCTP_ORYSJ	No assigned EC number	0.8427	0.9636	0.9464	yes	no
P0CR82	TCTP_CRYNJ	No assigned EC number	0.3975	0.9333	0.9221	yes	no
Q7QCK2	TCTP_ANOGA	No assigned EC number	0.4085	0.9393	0.9064	yes	no
Q6C4G1	TCTP_YARLI	No assigned EC number	0.3788	0.9333	0.9221	yes	no
P13693	TCTP_HUMAN	No assigned EC number	0.3719	0.9454	0.9069	yes	no
Q54RX6	TCTP1_DICDI	No assigned EC number	0.4131	0.9757	0.9252	yes	no
Q4IJT5	TCTP_GIBZE	No assigned EC number	0.4303	0.9393	0.9117	yes	no
Q293Y0	TCTP_DROPS	No assigned EC number	0.3674	0.9454	0.9069	yes	no
O03992	TCTP_FRAAN	No assigned EC number	0.8509	0.9636	0.9352	N/A	no
Q8LRM8	TCTP_WHEAT	No assigned EC number	0.7987	0.9636	0.9464	N/A	no
Q944T2	TCTP_SOYBN	No assigned EC number	0.8553	0.9636	0.9464	no	no
Q9ZRX0	TCTP_PSEMZ	No assigned EC number	0.8176	0.9575	0.9461	N/A	no
Q9VGS2	TCTP_DROME	No assigned EC number	0.3795	0.9454	0.9069	yes	no
Q9XHL7	TCTP_TOBAC	No assigned EC number	0.8113	0.9636	0.9464	N/A	no
Q9M5I8	TCTP_CUCME	No assigned EC number	0.7924	0.9636	0.9464	N/A	no
P35691	TCTP_YEAST	No assigned EC number	0.4121	0.8545	0.8443	yes	no
P28014	TCTP_MEDSA	No assigned EC number	0.8113	0.9575	0.9461	N/A	no
Q8H6A5	TCTP_MAIZE	No assigned EC number	0.7484	0.9575	0.9461	N/A	no
Q9DGK4	TCTP_DANRE	No assigned EC number	0.3939	0.9454	0.9122	yes	no
P50906	TCTP_PEA	No assigned EC number	0.8176	0.9575	0.9461	N/A	no
P61288	TCTP_PIG	No assigned EC number	0.3719	0.9454	0.9069	yes	no
Q2PS27	TCTP_CUCMA	No assigned EC number	0.8490	0.9636	0.9464	N/A	no
Q5E984	TCTP_BOVIN	No assigned EC number	0.3658	0.9454	0.9069	yes	no
Q2UR29	TCTP_ASPOR	No assigned EC number	0.3515	0.9575	0.9132	yes	no
Q5J907	TCTP_ELAGV	No assigned EC number	0.8805	0.9636	0.9464	N/A	no
P31265	TCTP_ARATH	No assigned EC number	0.7987	0.9636	0.9464	yes	no
Q9M5G3	TCTP_HORVU	No assigned EC number	0.8113	0.9636	0.9464	N/A	no
P63028	TCTP_MOUSE	No assigned EC number	0.3963	0.9454	0.9069	yes	no
Q9ZSW9	TCTP_HEVBR	No assigned EC number	0.9433	0.9636	0.9464	N/A	no
P43348	TCTP_RABIT	No assigned EC number	0.3658	0.9454	0.9069	yes	no
P43349	TCTP_SOLTU	No assigned EC number	0.8364	0.9636	0.9464	N/A	no
Q6FKB6	TCTP_CANGA	No assigned EC number	0.3851	0.8545	0.8443	yes	no
Q944W6	TCTP_BRAOL	No assigned EC number	0.7735	0.9636	0.9464	N/A	no
A5A6K2	TCTP_PANTR	No assigned EC number	0.3719	0.9454	0.9069	yes	no
Q6DUX3	TCTP_SOLLC	No assigned EC number	0.8427	0.9636	0.9464	N/A	no
Q6CTH3	TCTP_KLULA	No assigned EC number	0.4121	0.8545	0.8443	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_2100027 SubName- Full=Putative uncharacterized protein; (168 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	165
pfam00838	165	pfam00838, TCTP, Translationally controlled tumour	2e-68
PTZ00151	172	PTZ00151, PTZ00151, translationally controlled tum	1e-31

>gnl|CDD|189736 pfam00838, TCTP, Translationally controlled tumour protein

 Score =  204 bits (522), Expect = 2e-68
 Identities = 82/160 (51%), Positives = 105/160 (65%), Gaps = 8/160 (5%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQ-GAVDVDIGANPSAEGADEDEGVDDQAVKVV 65
           GDEL SDSFP K + N +++EV+GK V + G  DV IGANPSAEG +E  GVD+   +VV
Sbjct: 10  GDELFSDSFPMK-LVNDLVYEVDGKMVTRTGGDDVLIGANPSAEGGEE--GVDETVERVV 66

Query: 66  DIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKL 122
           DIV  FRLQE  +FDKK F TY+K ++K +  KL EE  E   +FKKNI+G  K LL+K 
Sbjct: 67  DIVLNFRLQET-SFDKKSFKTYIKGYMKAVKAKLQEENPERVSLFKKNIQGWVKSLLAKF 125

Query: 123 SDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKE 162
            D QFF+GESM+ DG +    Y+E    P  ++  D L E
Sbjct: 126 KDYQFFIGESMNPDGMVALMNYREDGETPYMIFFKDGLIE 165

Length = 165

>gnl|CDD|173440 PTZ00151, PTZ00151, translationally controlled tumor-like protein; Provisional

 Score =  111 bits (279), Expect = 1e-31
 Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 12/166 (7%)

Query: 7   GDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQA 61
           GDE+ SDS+    P+   E + I +EV+ K V++G  D  I  N S EG  + EGVD   
Sbjct: 10  GDEVCSDSYKQLDPFGNAEFSEIAFEVKSKKVIKGNEDYGIADN-SEEG--DVEGVDADV 66

Query: 62  VKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFL 118
             V+DIVD F+LQ  P F KK++ TY+K++++ +   L E   +R E FK N +   K +
Sbjct: 67  ETVIDIVDAFKLQSTP-FTKKEYSTYIKKYMQRIKAYLEEKNPDRVEKFKTNAQPFVKHI 125

Query: 119 LSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 164
           L    D +F++GES+  +  L++ YYK     P F+YI D LKE +
Sbjct: 126 LENFDDFEFYLGESLDCEAGLIYGYYKGEELAPRFVYIKDGLKEER 171

Length = 172

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	165
PTZ00151	172	translationally controlled tumor-like protein; Pro	100.0
PF00838	165	TCTP: Translationally controlled tumour protein; I	100.0
KOG1727	169	consensus Microtubule-binding protein (translation	100.0

>PTZ00151 translationally controlled tumor-like protein; Provisional

Probab=100.00  E-value=8.1e-73  Score=453.03  Aligned_cols=156  Identities=38%  Similarity=0.682  Sum_probs=148.8

Q ss_pred             ccCCeeeccCCCce------EeeCCEEEEEEEEEEEeccccccCCCCCCCCCCCCCCCcccceEEeeeeeeccccccCCC
Q 031146            5 CLGDELLSDSFPYK------EIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPA   78 (165)
Q Consensus         5 itgDEm~SD~y~~~------~v~~~~~yeV~gk~v~~~~~d~~iG~N~saE~~e~~e~~~~~~~~vvDiV~~~~Lqe~t~   78 (165)
                      |||||||||+||++      ++ +|++|||+||+|+|+.++  ||+|||||+++ +|++++++++|||||+|||||| |+
T Consensus         8 ~tgDEm~SDsyk~~~~~~~~~~-~~~~yEV~~k~v~~~~~d--ig~n~saee~~-~e~~d~~~~~vvDIV~~frLqe-t~   82 (172)
T PTZ00151          8 FTGDEVCSDSYKQLDPFGNAEF-SEIAFEVKSKKVIKGNED--YGIADNSEEGD-VEGVDADVETVIDIVDAFKLQS-TP   82 (172)
T ss_pred             ccCCeeeccccccccccccccc-CCEEEEEeeEEEEECCcc--ccCCCCccccc-ccccccccEEEEEeeecCccee-cC
Confidence            79999999999998      55 579999999999998765  69999999753 6889999999999999999999 99


Q ss_pred             CCHHHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeeccCCCCCceEEEEeccCCCcceEEEE
Q 031146           79 FDKKQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLY  155 (165)
Q Consensus        79 f~Kk~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFy~Gesmd~dgmv~l~~y~edg~tP~~~f  155 (165)
                      ||||+|++|||+|||+|++||   +|+||+.|+++||++||+||+||+|||||+||||||||||||++|||||+||||+|
T Consensus        83 f~Kk~Y~~yiK~YmK~vk~~L~e~~pe~v~~Fk~~a~~~vK~il~~Fkd~qFf~GeSmd~dgmv~l~~Yredg~tP~~~f  162 (172)
T PTZ00151         83 FTKKEYSTYIKKYMQRIKAYLEEKNPDRVEKFKTNAQPFVKHILENFDDFEFYLGESLDCEAGLIYGYYKGEELAPRFVY  162 (172)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHhcCCceEeecCCCCCCccEEEEeecCCCcceEEEE
Confidence            999999999999999999999   59999999999999999999999999999999999999999999999999999999


Q ss_pred             EccccceecC
Q 031146          156 IADALKEVKC  165 (165)
Q Consensus       156 ~KdGL~eeK~  165 (165)
                      |||||+||||
T Consensus       163 ~KdGL~eeK~  172 (172)
T PTZ00151        163 IKDGLKEERY  172 (172)
T ss_pred             EcccceeecC
Confidence            9999999998

>PF00838 TCTP: Translationally controlled tumour protein; InterPro: IPR018105 Mammalian translationally controlled tumour protein (TCTP) (or P23) is a protein which has been found to be preferentially synthesised in cells during the early growth phase of some types of tumour [, ], but which is also expressed in normal cells

Probab=100.00  E-value=1e-70  Score=439.21  Aligned_cols=154  Identities=44%  Similarity=0.734  Sum_probs=141.5

Q ss_pred             ccCCeeeccCCCceEeeCCEEEEEEEEEEEec-cccccCCCCCCCCCCCCCCCcccceEEeeeeeeccccccCCCCCHHH
Q 031146            5 CLGDELLSDSFPYKEIENGILWEVEGKWVVQG-AVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQ   83 (165)
Q Consensus         5 itgDEm~SD~y~~~~v~~~~~yeV~gk~v~~~-~~d~~iG~N~saE~~e~~e~~~~~~~~vvDiV~~~~Lqe~t~f~Kk~   83 (165)
                      |||||||||+||++++ +|++|||+||+|+++ .++++||||||||+++  +++++++++|||||+|||||| |+||||+
T Consensus         8 isgdEm~SD~y~~~~~-~~~~yeV~gk~vt~~~~d~~liG~N~SaE~~~--e~~~~~~~~viDiV~~~~L~e-t~f~Kk~   83 (165)
T PF00838_consen    8 ISGDEMFSDSYKIELV-DDVFYEVEGKMVTRTGIDDSLIGANPSAEEGE--EGTDDSVETVIDIVDNHRLQE-TSFDKKS   83 (165)
T ss_dssp             TTTTEEEETTSCEEEG-CTTEEEEE--EEEEETTB-TTTSSS--SSSSS--SSSCCCECEEEHHHHHTTEEE-ECCHHHH
T ss_pred             CCCCEecccCcccccc-CCEEEEEEEEEEeeccccccccccCcccccCc--cCCCCccEEccceeeccccee-ecccHHH
Confidence            7999999999999655 679999999999995 4577899999999865  889999999999999999999 9999999


Q ss_pred             HHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeeccCCCCCceEEEEeccCCCcceEEEEEcccc
Q 031146           84 FVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAL  160 (165)
Q Consensus        84 y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFy~Gesmd~dgmv~l~~y~edg~tP~~~f~KdGL  160 (165)
                      |++|||+|||+|++||   .|+||++|+++|+++||+||+||||||||+||||||||||||++|||||+||||+||||||
T Consensus        84 y~~yiK~Y~K~i~~kL~e~~~erv~~F~~~a~~~vK~il~nfkd~qFf~Gesm~~dgmv~l~~yredg~tP~~~f~KdGL  163 (165)
T PF00838_consen   84 YKAYIKDYMKKIKEKLEENGPERVKAFKKGAQEFVKKILANFKDYQFFTGESMDPDGMVALLNYREDGVTPYFIFFKDGL  163 (165)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHHHHTGGGCEEEEETTCCTTS-EEEEEEETTSSSEEEEEEGGGE
T ss_pred             HHHHHHHHHHHHHHHHhhhccchhhHHHHHhHHHHHHHHhhccccccccccccCCCCcEEEEEecCCCccEEEEEEcccc
Confidence            9999999999999999   7999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ce
Q 031146          161 KE  162 (165)
Q Consensus       161 ~e  162 (165)
                      +|
T Consensus       164 ~E  165 (165)
T PF00838_consen  164 KE  165 (165)
T ss_dssp             EE
T ss_pred             cC
Confidence            87

The physiological function of TCTP is still not known. It was first identified as a histamine-releasing factor, acting in IgE +-dependent allergic reactions. In addition, TCTP has been shown to bind to tubulin in the cytoskeleton, has a high affinity for calcium, is the binding target for the antimalarial compound artemisinin, and is induced in vitamin D-dependent apoptosis. TCTP production is thought to be controlled at the translational as well as the transcriptional level []. TCTP is a hydrophilic protein of 18 to 20 kD. TCTPs do not share significant sequence similarity with any other class of proteins. Recently, the structure of TCTP was determined and exhibited significant structural similarity to the human protein Mss4, which is a guanine nucleotide-free chaperone of the Rab protein []. Close homologues have been found in plants [], earthworm [], Caenorhabditis elegans (F52H2.11), Hydra, Saccharomyces cerevisiae (YKL056c) [] and Schizosaccharomyces pombe (SpAC1F12.02c).; PDB: 2KWB_A 2LOY_A 1TXJ_A 1H6Q_A 1H7Y_A 3P3K_A 1YZ1_C 3EBM_D 2HR9_A.

>KOG1727 consensus Microtubule-binding protein (translationally controlled tumor protein) [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]

Probab=100.00  E-value=1.4e-63  Score=395.64  Aligned_cols=159  Identities=46%  Similarity=0.753  Sum_probs=149.1

Q ss_pred             ccCCeeeccCCCceEeeCCEEEEEEEEEEEecccc-ccCCCCCCCCCCCCCCCcccceEEeeeeeeccccccCCCCCHHH
Q 031146            5 CLGDELLSDSFPYKEIENGILWEVEGKWVVQGAVD-VDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQ   83 (165)
Q Consensus         5 itgDEm~SD~y~~~~v~~~~~yeV~gk~v~~~~~d-~~iG~N~saE~~e~~e~~~~~~~~vvDiV~~~~Lqe~t~f~Kk~   83 (165)
                      ||||||+||+||++++++ +||||+||+|+|+++| .+||+|||||++.+++++++++++|+|||++||||| +++.|++
T Consensus         8 ~t~del~sd~~~~k~i~~-l~~EvegK~vsr~~~D~~lig~NpSaE~~~edegte~~~~~~vdiV~~~rLqE-q~~~ke~   85 (169)
T KOG1727|consen    8 ITGDELLSDSYPMKEVDD-LCYEVEGKMVTRTNGDDSLIGANPSAEEGAEDEGTEETVETVVDIVLNFRLQE-QSPFKER   85 (169)
T ss_pred             ccCchhcccchhHHHHHh-hhheeeceeccccCccchhcccCccccccccCCcchhheeeeeeeeeeecccc-cchHHHH
Confidence            799999999999999976 9999999999998665 469999999997568999999999999999999999 4555999


Q ss_pred             HHHHHHHHHHHhccCCChHHHHHHHHhHHHHHHHHHh-cCCCcceeeccCCCCCceEEEEeccCCC-cceEEEEEccccc
Q 031146           84 FVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLS-KLSDLQFFVGESMHDDGCLVFAYYKEGA-TDPTFLYIADALK  161 (165)
Q Consensus        84 y~~yiK~Y~K~ik~kL~~erv~~F~~~a~~~vK~il~-nfkd~qFy~Gesmd~dgmv~l~~y~edg-~tP~~~f~KdGL~  161 (165)
                      |++|||+|||+|++||++++++.|+++++.++|.++. ||||||||+||||||||||||++||||| +||+|+||||||+
T Consensus        86 ~k~yik~ymK~v~~klee~~~~~f~k~~~~a~q~~h~anFKnyqFFIGEnMnpdgmVal~~YRedg~~~P~~~ffk~gl~  165 (169)
T KOG1727|consen   86 FKAYIKGYMKAVKAKLEEEDVDVFKKNIQGAEKIKHIANFKNYQFFIGENMNPDGMVALLDYREDGGVTPYMIFFKDGLE  165 (169)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhccchHHHHHHhhccccceeeecccCCCCceEEEeeeecCCCcCceEEEeccCcc
Confidence            9999999999999999889999999999999997776 9999999999999999999999999966 9999999999999


Q ss_pred             eecC
Q 031146          162 EVKC  165 (165)
Q Consensus       162 eeK~  165 (165)
                      +|||
T Consensus       166 ~ekc  169 (169)
T KOG1727|consen  166 EEKC  169 (169)
T ss_pred             cccC
Confidence            9998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	165
1h6q_A	168	Translationally Controlled Tumor-Associated Protein		8e-19
1yz1_A	174	Crystal Structure Of Human Translationally Controll		3e-17
2hr9_A	180	Solution Structure Of Human Translationally Control		3e-17
3ebm_A	180	Crystal Structure Of Human Translationally Controll		2e-16
3p3k_A	183	The Crystal Structure Of Translationally Controlled		3e-14
1txj_A	171	Crystal Structure Of Translationally Controlled Tum		7e-13
2kwb_A	189	Minimal Constraint Solution Nmr Structure Of Transl		3e-11

>pdb|1H6Q|A Chain A, Translationally Controlled Tumor-Associated Protein P23fyp From Schizosaccharomyces Pombe Length = 168

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 8/158 (5%)
Query: 7   GDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVV 65
           GDEL+SD++  KE+++ I++E + + V V+   DVDIGANPS                V 
Sbjct: 10  GDELVSDAYDLKEVDD-IVYEADCQMVTVKQGGDVDIGANPSAEDAEENAEEGTET--VN 66
Query: 66  DIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKL 122
           ++V +FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+  
Sbjct: 67  NLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANF 125
Query: 123 SDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAL 160
            D  F++GESM  D  +V   Y+E    P  ++  D L
Sbjct: 126 KDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGL 163

>pdb|1YZ1|A Chain A, Crystal Structure Of Human Translationally Controlled Tumour Associated Protein Length = 174

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
Query: 8   DELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKV 64
           DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S                V
Sbjct: 13  DEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV 72
Query: 65  VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSK 121
            DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+ 
Sbjct: 73  -DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILAN 130
Query: 122 LSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
             + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 131 FKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 174

>pdb|2HR9|A Chain A, Solution Structure Of Human Translationally Controlled Tumor Protein Length = 180

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
Query: 8   DELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKV 64
           DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S                V
Sbjct: 11  DEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV 70
Query: 65  VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSK 121
            DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+ 
Sbjct: 71  -DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILAN 128
Query: 122 LSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
             + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 129 FKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172

>pdb|3EBM|A Chain A, Crystal Structure Of Human Translationally Controlled Tumour Associated Protein (Htctp) Mutant E12v Length = 180

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 8   DELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKV 64
           D + SD +  +EI +G+  EVEGK V +   ++D   IG N S                V
Sbjct: 11  DVMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV 70
Query: 65  VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSK 121
            DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+ 
Sbjct: 71  -DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILAN 128
Query: 122 LSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
             + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 129 FKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172

>pdb|3P3K|A Chain A, The Crystal Structure Of Translationally Controlled Tumor Protein (Tctp) Of Plasmodium Falciparum Length = 183

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 13/166 (7%)
Query: 7   GDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXX 61
            DE+ SDS+    P++  E   I +EV+    ++G  D  I  N                
Sbjct: 14  NDEVCSDSYVQQDPFEVPEFREIAFEVKSNKRIKGNEDYGIADNSEDAVEGMGADVE--- 70
Query: 62  XKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFL 118
             V+DIVD+F+L    AF KK++  Y+K +++ +   L E   +R EIFK   +   K +
Sbjct: 71  -HVIDIVDSFQLT-STAFSKKEYSAYIKNYMQKVAKYLEEKKPDRVEIFKTKAQPFIKHI 128
Query: 119 LSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 164
           L+   D +F++GES+  +  ++++YYK     P F+YI+D L E K
Sbjct: 129 LTNFDDFEFYMGESLDMEAGIIYSYYKGEEITPRFVYISDGLFEEK 174

>pdb|1TXJ|A Chain A, Crystal Structure Of Translationally Controlled Tumour- Associated Protein (Tctp) From Plasmodium Knowlesi Length = 171

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Query: 7   GDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXX 61
            DE+ SDS+    P+   +   I +EV+    ++G  D  I  N                
Sbjct: 10  NDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNSEEAVDGMGADVE--- 66
Query: 62  XKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFL 118
            +V+DIVD+F+L    +  KK++  Y+K +++ +   L E   +R ++FK   +   K +
Sbjct: 67  -QVIDIVDSFQLT-STSLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHI 124
Query: 119 LSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 164
           L+   D +F++GES+  D  L ++YYK     P F+YI+D L E K
Sbjct: 125 LTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLYEEK 170

>pdb|2KWB|A Chain A, Minimal Constraint Solution Nmr Structure Of Translationally Controlled Tumor Protein (Tctp) From C.Elegans, Northeast S Genomics Consortium Target Wr73 Length = 189

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 15/172 (8%)
Query: 8   DELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVD 66
           DEL SDSFP K +++ +++E +GK VV+   ++ + G+NPS               + +D
Sbjct: 11  DELSSDSFPMKLVDD-LVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGID 69
Query: 67  IVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSEERQ-----EIFKKNIEGATKFLLS 120
           IV   +L E   + D   F  Y+K+F+K +   + +  +     + FKK I+G    LL+
Sbjct: 70  IVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLA 129
Query: 121 K--LSDLQFFVGESM---HDDGCLVFAYYK--EGATDPTFLYIADALKEVKC 165
           K    +L FF+GE      ++G +    Y+  +G   PT + + +A+ E KC
Sbjct: 130 KDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEKC 181

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	165
1yz1_A	174	Translationally controlled tumor protein; unknown	2e-59
2kwb_A	189	TCTP, translationally-controlled tumor protein hom	4e-52
1h6q_A	168	TCTP, P23FYP, translationally controlled tumor pro	5e-52
1txj_A	171	Translationally controlled tumour-associated prote	3e-50
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1yz1_A Translationally controlled tumor protein; unknown function; 2.00A {Homo sapiens} SCOP: b.88.1.2 PDB: 2hr9_A 3ebm_A Length = 174

 Score =  181 bits (461), Expect = 2e-59
 Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 8/165 (4%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVK 63
            DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N SAEG  E EG +   + 
Sbjct: 12  HDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGP-EGEGTESTVIT 70

Query: 64  VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLS 120
            VDIV    LQE   F K+ +  Y+K ++K +  KL E+R E    F        K +L+
Sbjct: 71  GVDIVMNHHLQETS-FTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILA 129

Query: 121 KLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
              + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 130 NFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 174

>2kwb_A TCTP, translationally-controlled tumor protein homolog; structural genomics, northeast structural genomics consortiu PSI-2; NMR {Caenorhabditis elegans} PDB: 2loy_A Length = 189

 Score =  163 bits (414), Expect = 4e-52
 Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 15/173 (8%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSAEGADEDEGVDDQAVKVV 65
            DEL SDSFP K + + +++E +GK VV+   ++ + G+NPSAE   ED+G D+   + +
Sbjct: 10  DDELSSDSFPMKLV-DDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGI 68

Query: 66  DIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSEERQEI-----FKKNIEGATKFLL 119
           DIV   +L E   + D   F  Y+K+F+K +   + +  ++      FKK I+G    LL
Sbjct: 69  DIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLL 128

Query: 120 SKLS--DLQFFVGESM---HDDGCLVFAYYKE--GATDPTFLYIADALKEVKC 165
           +K    +L FF+GE      ++G +    Y++  G   PT + + +A+ E KC
Sbjct: 129 AKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEKC 181

>1h6q_A TCTP, P23FYP, translationally controlled tumor protein; tumor-associated protein, function unknown; NMR {Schizosaccharomyces pombe} SCOP: b.88.1.2 PDB: 1h7y_A Length = 168

 Score =  162 bits (412), Expect = 5e-52
 Identities = 60/162 (37%), Positives = 94/162 (58%), Gaps = 8/162 (4%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSAEGADEDEGVDDQAVKVV 65
           GDEL+SD++  KE++  I++E + + V V+   DVDIGANPSAE    +E  ++    V 
Sbjct: 10  GDELVSDAYDLKEVD-DIVYEADCQMVTVKQGGDVDIGANPSAED--AEENAEEGTETVN 66

Query: 66  DIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKL 122
           ++V +FRL     FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+  
Sbjct: 67  NLVYSFRLSPTS-FDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANF 125

Query: 123 SDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 164
            D  F++GESM  D  +V   Y+E    P  ++  D L   K
Sbjct: 126 KDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167

>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} SCOP: b.88.1.2 PDB: 3p3k_A Length = 171

 Score =  158 bits (400), Expect = 3e-50
 Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 13/166 (7%)

Query: 7   GDELLSDSFPYKEI-----ENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQA 61
            DE+ SDS+  ++         I +EV+    ++G  D  I  N      +  +G+    
Sbjct: 10  NDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNSE----EAVDGMGADV 65

Query: 62  VKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFL 118
            +V+DIVD+F+L       KK++  Y+K +++ +   L E++ +   +FK   +   K +
Sbjct: 66  EQVIDIVDSFQLTSTS-LSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHI 124

Query: 119 LSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 164
           L+   D +F++GES+  D  L ++YYK     P F+YI+D L E K
Sbjct: 125 LTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLYEEK 170

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-05
 Identities = 26/114 (22%), Positives = 36/114 (31%), Gaps = 17/114 (14%)

Query: 52  DEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFK-KN 110
           D + G      K  DI+  F       FD K      K  +        EE   I   K+
Sbjct: 8   DFETGEHQYQYK--DILSVFEDAFVDNFDCKDVQDMPKSILS------KEEIDHIIMSKD 59

Query: 111 IEGATKFLLSKLSD-----LQFFVGESMHDD-GCLVFAYYKE--GATDPTFLYI 156
               T  L   L       +Q FV E +  +   L+     E    +  T +YI
Sbjct: 60  AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	165
1h6q_A	168	TCTP, P23FYP, translationally controlled tumor pro	100.0
1yz1_A	174	Translationally controlled tumor protein; unknown	100.0
1txj_A	171	Translationally controlled tumour-associated prote	100.0
2kwb_A	189	TCTP, translationally-controlled tumor protein hom	100.0

>1h6q_A TCTP, P23FYP, translationally controlled tumor protein; tumor-associated protein, function unknown; NMR {Schizosaccharomyces pombe} SCOP: b.88.1.2 PDB: 1h7y_A

Probab=100.00  E-value=1.8e-76  Score=471.87  Aligned_cols=157  Identities=38%  Similarity=0.674  Sum_probs=153.1

Q ss_pred             ccCCeeeccCCCceEeeCCEEEEEEEEEEEe-ccccccCCCCCCCCCCCCCCCcccceEEeeeeeeccccccCCCCCHHH
Q 031146            5 CLGDELLSDSFPYKEIENGILWEVEGKWVVQ-GAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQ   83 (165)
Q Consensus         5 itgDEm~SD~y~~~~v~~~~~yeV~gk~v~~-~~~d~~iG~N~saE~~e~~e~~~~~~~~vvDiV~~~~Lqe~t~f~Kk~   83 (165)
                      ||||||||||||++++ +|++|||+||+|+| +++|++||||||||++  ++++++++++|||||+|||||| |+||||+
T Consensus         8 itgDEm~SDsy~~k~v-d~~~yEV~gk~v~~~~~~didiGaN~SaE~~--~eg~d~~~~~vvdiV~~~rLqe-t~fdKk~   83 (168)
T 1h6q_A            8 ISGDELVSDAYDLKEV-DDIVYEADCQMVTVKQGGDVDIGANPSAEDA--EENAEEGTETVNNLVYSFRLSP-TSFDKKS   83 (168)
T ss_dssp             TTTSSCEETTTCEEEC-SSSEEEEECCEEEEECCCCSTTSCCCCCCSC--SCSSCCCEEEEEHHHHHTTCEE-CCCCHHH
T ss_pred             CCCCEEeecCcccEee-CCEEEEEeeEEEEEccCCccccccCcccccc--ccccCCceEEeeeeeEeccccc-CCcCHHH
Confidence            8999999999999999 67999999999999 9999999999999985  5889999999999999999999 9999999


Q ss_pred             HHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeeccCCCCCceEEEEeccCCCcceEEEEEcccc
Q 031146           84 FVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAL  160 (165)
Q Consensus        84 y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFy~Gesmd~dgmv~l~~y~edg~tP~~~f~KdGL  160 (165)
                      |++|||+|||+|++||   +||||++|+++||++||+||+||+|||||+||||||||||||++|||||+||||+||||||
T Consensus        84 y~~yiK~YmK~v~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qFf~GEsmd~dgmvvl~~Yredg~tP~~~f~K~GL  163 (168)
T 1h6q_A           84 YMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGL  163 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTTTTCCEECTTCCTTSCCEEEEECSSSSCEEEEEESTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhCcCccEeccCCCCCCceEEEEEecCCCCCeEEEEEcccc
Confidence            9999999999999999   6899999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceecC
Q 031146          161 KEVKC  165 (165)
Q Consensus       161 ~eeK~  165 (165)
                      +||||
T Consensus       164 ~eeK~  168 (168)
T 1h6q_A          164 VSEKF  168 (168)
T ss_dssp             EEECC
T ss_pred             eeecC
Confidence            99998

>1yz1_A Translationally controlled tumor protein; unknown function; 2.00A {Homo sapiens} SCOP: b.88.1.2 PDB: 2hr9_A 3ebm_A

Probab=100.00  E-value=2.2e-76  Score=473.82  Aligned_cols=159  Identities=36%  Similarity=0.639  Sum_probs=132.2

Q ss_pred             ccCCeeeccCCCceEeeCCEEEEEEEEEEEecccccc---CCCCCCCCCCCCCCCcccceEEeeeeeeccccccCCCCCH
Q 031146            5 CLGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDK   81 (165)
Q Consensus         5 itgDEm~SD~y~~~~v~~~~~yeV~gk~v~~~~~d~~---iG~N~saE~~e~~e~~~~~~~~vvDiV~~~~Lqe~t~f~K   81 (165)
                      ||||||||||||++++.+|++|||+||+|+|++++++   ||||||||+++ ++++++++++|||||+|||||| |+|||
T Consensus        10 itgDEm~SDsy~~~~~~dg~~yEV~gk~v~~~~g~idd~liGaN~SaE~~~-~eg~d~~~~~~vdiV~~~rLqe-t~fdK   87 (174)
T 1yz1_A           10 ISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPE-GEGTESTVITGVDIVMNHHLQE-TSFTK   87 (174)
T ss_dssp             TTCCEEEETTSEEEEEGGGTEEEEECCBCCC-----------------------------CCCBHHHHHTTCEE-ECCCH
T ss_pred             CCCCEEeecCcccEEccCCEEEEEeeEEEEecCCCccccccccCccccccc-ccccCcceEEcceeEeeccccc-cCcCH
Confidence            7999999999999999888999999999999999886   99999999864 6889999999999999999999 99999


Q ss_pred             HHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeeccCCCCCceEEEEeccCCCcceEEEEEcc
Q 031146           82 KQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIAD  158 (165)
Q Consensus        82 k~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFy~Gesmd~dgmv~l~~y~edg~tP~~~f~Kd  158 (165)
                      |+|++|||+|||+|++||   +||||++|+++||++||+||+||||||||+||||||||||||++|||||+||||+||||
T Consensus        88 k~y~~yiK~YmK~v~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qFf~GESmd~dgmvvl~~Yredg~tP~~~f~K~  167 (174)
T 1yz1_A           88 EAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKD  167 (174)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCEEEEEECTTSSCEEEEEEGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHhhCcCccEeccCCCCCCccEEEEEccCCCcCeEEEEEcc
Confidence            999999999999999999   69999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceecC
Q 031146          159 ALKEVKC  165 (165)
Q Consensus       159 GL~eeK~  165 (165)
                      ||+||||
T Consensus       168 GL~eeK~  174 (174)
T 1yz1_A          168 GLEMEKC  174 (174)
T ss_dssp             GEEEEEC
T ss_pred             cceeecC
Confidence            9999998

>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} SCOP: b.88.1.2 PDB: 3p3k_A

Probab=100.00  E-value=3.7e-74  Score=459.61  Aligned_cols=155  Identities=32%  Similarity=0.623  Sum_probs=136.6

Q ss_pred             ccCCeeeccCC----Cce--EeeCCEEEEEEEEEEEeccccccCCCCCCCCCCCCCCCcccceEEeeeeeeccccccCCC
Q 031146            5 CLGDELLSDSF----PYK--EIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPA   78 (165)
Q Consensus         5 itgDEm~SD~y----~~~--~v~~~~~yeV~gk~v~~~~~d~~iG~N~saE~~e~~e~~~~~~~~vvDiV~~~~Lqe~t~   78 (165)
                      |||||||||||    |++  ++ +|++|||+||+|+|+++|++||||||||++  +++++  +++|||||+|||||| |+
T Consensus         8 itgDEm~SDsy~~~~~~k~~e~-~~~~yEV~gk~v~~~~~~idiGaN~saE~~--~e~~d--~~~vvdIV~~~rL~e-t~   81 (171)
T 1txj_A            8 FTNDEVCSDSYNQEDPFGIADF-REIAFEVKSNKRIKGNDDYGIADNSEEAVD--GMGAD--VEQVIDIVDSFQLTS-TS   81 (171)
T ss_dssp             TTCCEEEETTSCCBCGGGCGGG-TTTEEEEECCEEESCC----------------CCCCS--SCEEEHHHHHHTCEE-EC
T ss_pred             CcCCEEEeccccccCCcccccc-CCEEEEEEeEEEEECCCcccccCCcccccc--ccCcc--eeecceEEEecceee-cC
Confidence            79999999999    999  88 569999999999999999999999999985  47776  899999999999999 99


Q ss_pred             CCHHHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeeccCCCCCceEEEEeccCCCcceEEEE
Q 031146           79 FDKKQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLY  155 (165)
Q Consensus        79 f~Kk~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFy~Gesmd~dgmv~l~~y~edg~tP~~~f  155 (165)
                      ||||+|++|||+|||+|++||   +||||++|+++||++||+||+||+|||||+||||||||||||++|||||+||||+|
T Consensus        82 f~Kk~y~~yiK~YmK~i~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qFf~GESmd~dgmvvl~~Yredg~tP~~~f  161 (171)
T 1txj_A           82 LSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVY  161 (171)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCCEEEECCTTCSSCEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhCcCccEeccCCCCCCceEEEEEecCCCCCeEEEE
Confidence            999999999999999999999   68999999999999999999999999999999999999999999999999999999


Q ss_pred             EccccceecC
Q 031146          156 IADALKEVKC  165 (165)
Q Consensus       156 ~KdGL~eeK~  165 (165)
                      |||||+||||
T Consensus       162 ~K~GL~eeK~  171 (171)
T 1txj_A          162 ISDGLYEEKF  171 (171)
T ss_dssp             EGGGEEEEEC
T ss_pred             EcccceeecC
Confidence            9999999998

>2kwb_A TCTP, translationally-controlled tumor protein homolog; structural genomics, northeast structural genomics consortiu PSI-2; NMR {Caenorhabditis elegans} PDB: 2loy_A

Probab=100.00  E-value=1.6e-72  Score=455.94  Aligned_cols=159  Identities=35%  Similarity=0.633  Sum_probs=152.9

Q ss_pred             ccCCeeeccCCCceEeeCCEEEEEEEEEEEecccccc-CCCCCCCCCCCCCCCcccceEEeeeeeeccccccCCCC--CH
Q 031146            5 CLGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD-IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAF--DK   81 (165)
Q Consensus         5 itgDEm~SD~y~~~~v~~~~~yeV~gk~v~~~~~d~~-iG~N~saE~~e~~e~~~~~~~~vvDiV~~~~Lqe~t~f--~K   81 (165)
                      ||||||||||||++++ +|++|||+||+|+|++++++ ||||||||++++++++++++++|||||+|||||| |+|  ||
T Consensus         8 itgDEmfSDsy~~k~v-d~~~yEV~gK~v~~~~gdidl~GaN~SaE~~~~~eg~d~~~~~vvDIV~n~rLqe-t~f~~dK   85 (189)
T 2kwb_A            8 FTDDELSSDSFPMKLV-DDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVE-MNCYEDA   85 (189)
T ss_dssp             SCTTTCEEECCCCEEE-TTTEEEEECCEECCBTTBCCCCCCSCCCSSCCSSCCCGGGCSSEEHHHHTTTEEE-ECHHHHH
T ss_pred             CCCCEEeecCccCEee-CCEEEEEeeEEEEECCccccccccCccccccccccccCCccEEcceeEEecceee-cccccCH
Confidence            7999999999999999 57999999999999999998 8999999985457899999999999999999999 999  99


Q ss_pred             HHHHHHHHHHHHHhccCC---ChHH--HHHHHHhHHHHHHHHHh--cCCCcceeeccCCCC---CceEEEEeccC-CC-c
Q 031146           82 KQFVTYMKRFIKLLTPKL---SEER--QEIFKKNIEGATKFLLS--KLSDLQFFVGESMHD---DGCLVFAYYKE-GA-T  149 (165)
Q Consensus        82 k~y~~yiK~Y~K~ik~kL---~~er--v~~F~~~a~~~vK~il~--nfkd~qFy~Gesmd~---dgmv~l~~y~e-dg-~  149 (165)
                      |+|++|||+|||+|++||   +|+|  |++|+++||++||+||+  ||||||||+||||||   ||||||++||| || +
T Consensus        86 k~y~~yiK~YmK~v~~kLee~~pe~e~v~~Fk~~a~~~vK~iL~k~~Fkd~qFf~GESmd~~~~dGmv~l~~Yre~dg~~  165 (189)
T 2kwb_A           86 SMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTE  165 (189)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCHHHHTTCEEEEEHHHHHHTSCCCEEEEEEEEETTEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHhccccccCccEeccCCCCCCCCCceEEEEEEEcCCCCc
Confidence            999999999999999999   5777  99999999999999999  999999999999999   99999999999 99 9


Q ss_pred             ceEEEEEccccceecC
Q 031146          150 DPTFLYIADALKEVKC  165 (165)
Q Consensus       150 tP~~~f~KdGL~eeK~  165 (165)
                      ||||+||||||+||||
T Consensus       166 tP~~~ffK~GL~eeK~  181 (189)
T 2kwb_A          166 VPTLMLVKEAIIEEKC  181 (189)
T ss_dssp             EEEEEEETTTEEEECC
T ss_pred             CeEEEEEccCceEEEe
Confidence            9999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	165
d1yz1a1	172	b.88.1.2 (A:1-172) Translationally controlled tumo	4e-66
d1h6qa_	168	b.88.1.2 (A:) Translationally controlled tumor pro	7e-63
d1txja_	171	b.88.1.2 (A:) Translationally controlled tumor pro	3e-56

>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  197 bits (502), Expect = 4e-66
 Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 8/165 (4%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVK 63
            DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N SAEG  E EG +   + 
Sbjct: 10  HDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGP-EGEGTESTVIT 68

Query: 64  VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLS 120
            VDIV    LQE   F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+
Sbjct: 69  GVDIVMNHHLQETS-FTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILA 127

Query: 121 KLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 165
              + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 128 NFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172

>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 168

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  189 bits (481), Expect = 7e-63
 Identities = 61/162 (37%), Positives = 95/162 (58%), Gaps = 8/162 (4%)

Query: 7   GDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSAEGADEDEGVDDQAVKVV 65
           GDEL+SD++  KE++  I++E + + V V+   DVDIGANPSAE A+E    ++    V 
Sbjct: 10  GDELVSDAYDLKEVD-DIVYEADCQMVTVKQGGDVDIGANPSAEDAEE--NAEEGTETVN 66

Query: 66  DIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKL 122
           ++V +FRL     FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+  
Sbjct: 67  NLVYSFRLSPTS-FDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANF 125

Query: 123 SDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 164
            D  F++GESM  D  +V   Y+E    P  ++  D L   K
Sbjct: 126 KDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167

>d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Plasmodium knowlesi [TaxId: 5850]} Length = 171

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Plasmodium knowlesi [TaxId: 5850]

 Score =  172 bits (437), Expect = 3e-56
 Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 13/166 (7%)

Query: 7   GDELLSDSFPYKEI-----ENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQA 61
            DE+ SDS+  ++         I +EV+    ++G  D  I  N      +  +G+    
Sbjct: 10  NDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNS----EEAVDGMGADV 65

Query: 62  VKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFL 118
            +V+DIVD+F+L    +  KK++  Y+K +++ +   L E   +R ++FK   +   K +
Sbjct: 66  EQVIDIVDSFQLTS-TSLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHI 124

Query: 119 LSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 164
           L+   D +F++GES+  D  L ++YYK     P F+YI+D L E K
Sbjct: 125 LTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLYEEK 170

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	165
d1h6qa_	168	Translationally controlled tumor protein TCTP (his	100.0
d1yz1a1	172	Translationally controlled tumor protein TCTP (his	100.0
d1txja_	171	Translationally controlled tumor protein TCTP (his	100.0

>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=6.9e-74  Score=455.38  Aligned_cols=157  Identities=38%  Similarity=0.673  Sum_probs=150.6

Q ss_pred             ccCCeeeccCCCceEeeCCEEEEEEEEEEEecc-ccccCCCCCCCCCCCCCCCcccceEEeeeeeeccccccCCCCCHHH
Q 031146            5 CLGDELLSDSFPYKEIENGILWEVEGKWVVQGA-VDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQ   83 (165)
Q Consensus         5 itgDEm~SD~y~~~~v~~~~~yeV~gk~v~~~~-~d~~iG~N~saE~~e~~e~~~~~~~~vvDiV~~~~Lqe~t~f~Kk~   83 (165)
                      |||||||||+||++++ +|++|||+||+|++++ ++.+||||||||+++  +++++++++|||||+|||||| |+|||++
T Consensus         8 itgDEmfSDsyk~~~v-d~~~yEV~gk~vt~~~~~d~~iGaN~saE~~~--e~~~~~~~~~vDiV~~~rL~e-t~f~Kk~   83 (168)
T d1h6qa_           8 ISGDELVSDAYDLKEV-DDIVYEADCQMVTVKQGGDVDIGANPSAEDAE--ENAEEGTETVNNLVYSFRLSP-TSFDKKS   83 (168)
T ss_dssp             TTTSSCEETTTCEEEC-SSSEEEEECCEEEEECCCCSTTSCCCCCCSCS--CSSCCCEEEEEHHHHHTTCEE-CCCCHHH
T ss_pred             CcCCeEeecCccCEEE-cCEEEEEEeEEEEeecCcccccccCccccccc--CCCCCCceEEEEeeecccccc-CCCCHHH
Confidence            8999999999999999 5799999999999765 567899999999864  788999999999999999999 9999999


Q ss_pred             HHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeeccCCCCCceEEEEeccCCCcceEEEEEcccc
Q 031146           84 FVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAL  160 (165)
Q Consensus        84 y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFy~Gesmd~dgmv~l~~y~edg~tP~~~f~KdGL  160 (165)
                      |++|||+|||+|+++|   +||||+.|+++||++||+||+||||||||+||||||||||||++|||||+||+|+||||||
T Consensus        84 y~~yiK~YmK~vk~~L~e~~perv~~Fk~~a~~~vK~Il~nFkd~qFf~GESmd~dgmv~l~~yredg~tP~~~f~KdGL  163 (168)
T d1h6qa_          84 YMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGL  163 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTTTTCCEECTTCCTTSCCEEEEECSSSSCEEEEEESTTC
T ss_pred             HHHHHHHHHHHHHHHHhhcCHHHHHHHHHhHHHHHHHHHhcCccceEeccCCCCCCceEEEEEecCCCcceEEEEEccce
Confidence            9999999999999999   7999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceecC
Q 031146          161 KEVKC  165 (165)
Q Consensus       161 ~eeK~  165 (165)
                      +|||+
T Consensus       164 ~eeKy  168 (168)
T d1h6qa_         164 VSEKF  168 (168)
T ss_dssp             EEECC
T ss_pred             eeecC
Confidence            99996

>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-75  Score=462.74  Aligned_cols=159  Identities=36%  Similarity=0.639  Sum_probs=132.3

Q ss_pred             ccCCeeeccCCCceEeeCCEEEEEEEEEEEecccccc---CCCCCCCCCCCCCCCcccceEEeeeeeeccccccCCCCCH
Q 031146            5 CLGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDK   81 (165)
Q Consensus         5 itgDEm~SD~y~~~~v~~~~~yeV~gk~v~~~~~d~~---iG~N~saE~~e~~e~~~~~~~~vvDiV~~~~Lqe~t~f~K   81 (165)
                      |||||||||+||++++.||++|||+||+|++.++++|   ||||||||+++ +|++++++++|||||+|||||| |+|||
T Consensus         8 ~tgDE~~SDsy~~k~~~d~~~yEV~gk~v~~~~g~id~~liGaN~SaE~~~-~eg~~~~~~~~vDiV~~~rL~e-t~f~K   85 (172)
T d1yz1a1           8 ISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPE-GEGTESTVITGVDIVMNHHLQE-TSFTK   85 (172)
T ss_dssp             TTCCEEEETTSEEEEEGGGTEEEEECCBCCC-----------------------------CCCBHHHHHTTCEE-ECCCH
T ss_pred             CcCCeEeecCcccEecCCCeEEEEEeEEEEEcccccccccccCCccccccc-cccccccceeccCeEEeeeeee-cCCCH
Confidence            7999999999999999889999999999999998885   99999999865 7899999999999999999999 99999


Q ss_pred             HHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeeccCCCCCceEEEEeccCCCcceEEEEEcc
Q 031146           82 KQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIAD  158 (165)
Q Consensus        82 k~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFy~Gesmd~dgmv~l~~y~edg~tP~~~f~Kd  158 (165)
                      |+|++|||+|||+|++||   +|+||+.|+++||++||+||+||||||||+||||||||||||++|||||+||||+||||
T Consensus        86 k~y~~yiK~YmK~v~~~L~e~~~e~v~~F~~~a~~~vK~il~~fkd~qFf~GeSmd~dgmvvl~~Yredg~tP~~~f~Kd  165 (172)
T d1yz1a1          86 EAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKD  165 (172)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCEEEEEECTTSSCEEEEEEGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHhHHHHHHHHhccccceEEccCCCCCCceEEEEEEcCCCcceEEEEEcC
Confidence            999999999999999999   79999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceecC
Q 031146          159 ALKEVKC  165 (165)
Q Consensus       159 GL~eeK~  165 (165)
                      ||+||||
T Consensus       166 GL~eeKc  172 (172)
T d1yz1a1         166 GLEMEKC  172 (172)
T ss_dssp             GEEEEEC
T ss_pred             ceeeecC
Confidence            9999999

>d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Plasmodium knowlesi [TaxId: 5850]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Plasmodium knowlesi [TaxId: 5850]

Probab=100.00  E-value=6.6e-69  Score=427.78  Aligned_cols=156  Identities=31%  Similarity=0.588  Sum_probs=136.6

Q ss_pred             ccCCeeeccCCCceEee-----CCEEEEEEEEEEEeccccccCCCCCCCCCCCCCCCcccceEEeeeeeeccccccCCCC
Q 031146            5 CLGDELLSDSFPYKEIE-----NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAF   79 (165)
Q Consensus         5 itgDEm~SD~y~~~~v~-----~~~~yeV~gk~v~~~~~d~~iG~N~saE~~e~~e~~~~~~~~vvDiV~~~~Lqe~t~f   79 (165)
                      |||||||||+||++++.     .+++|||+|++++++++++  |+|||||++  ++|+++++++|||||+|||||| |+|
T Consensus         8 isgDEmfSDsyk~~~~~~~~d~~~~~~ev~~~~~~~~~~d~--~~~~~aee~--~eg~~~~~~~vvDiV~~~rLqe-t~f   82 (171)
T d1txja_           8 FTNDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDY--GIADNSEEA--VDGMGADVEQVIDIVDSFQLTS-TSL   82 (171)
T ss_dssp             TTCCEEEETTSCCBCGGGCGGGTTTEEEEECCEEESCC------------------CCCCSSCEEEHHHHHHTCEE-ECC
T ss_pred             CcCCeEeeccccccccccccccccEEEEEEEEEEEeccccc--ccCCCcccc--ccccCCcceEeeeeEEeeeeee-cCC
Confidence            89999999999999752     3699999999999877655  555556653  4778899999999999999999 999


Q ss_pred             CHHHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeeccCCCCCceEEEEeccCCCcceEEEEE
Q 031146           80 DKKQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYI  156 (165)
Q Consensus        80 ~Kk~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFy~Gesmd~dgmv~l~~y~edg~tP~~~f~  156 (165)
                      |||+|++|||+|||+|++||   +|+||+.|+++||++||+||+|||||||||||||||||||||++|||||+||||+||
T Consensus        83 ~Kk~y~~yiK~YmK~v~~~L~e~~perV~~Fk~~a~~~vK~Il~nFkd~qFf~GESmd~dgmv~l~~yredg~tP~~~f~  162 (171)
T d1txja_          83 SKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYI  162 (171)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCCEEEECCTTCSSCEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHhhCccceEeccCCCCCCceEEEEEecCCCcceEEEEE
Confidence            99999999999999999999   799999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecC
Q 031146          157 ADALKEVKC  165 (165)
Q Consensus       157 KdGL~eeK~  165 (165)
                      ||||+|||+
T Consensus       163 K~GL~eeKy  171 (171)
T d1txja_         163 SDGLYEEKF  171 (171)
T ss_dssp             GGGEEEEEC
T ss_pred             ccceeeecC
Confidence            999999996