Citrus Sinensis ID: 031230

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160---
Protein Sequence
MAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW
Secondary Structure (PSIPRED)
ccccccccccccEEccEEcccccccEEcccccccccEEEEEccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEccccEEEEEccc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEccEEEccccccEEEEEEccccEEEEEEEcccHHHHHHHHHHHHHHHHccccccHccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccEEcccccccccccEEEEEEEEEccEEEEEccc
Coil and Loop (DISEMBL)
mamaipipsrqlfingewrepvlkkripivnptteeivgdipaataEDVELAVDAARQALSrnkgkdwssasGAFRAKYLRAIAAKITERKSelanletidcgkpleeAVWDIDDVAGCFEYYADLAEGldakqkapvslpmenfksyvlkepigvvglitpw
Flexible Loop (DISEMBL)
mamaipipsrqlfingewrepvlkkripivnptteeiVGDIPAATAEDVELAVDAARQAlsrnkgkdwssasgaFRAKYLRAIAAKITerkselanletidcgkPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMenfksyvlkepigvvglitpw
Low Complexity Region (SEG)
MAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW
Disordered region (IsUnstruct)
*********RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDA****************SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLIT**
Disordered Region (DISOPRED)
*****PIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW
Disordered Region (DISEMBL)
MAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQA***********ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW
Disordered Region (DISPRO)
**MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	163	2.2.26 [Sep-21-2011]
Q9S795	501	Betaine aldehyde dehydrog	yes	no	0.987	0.321	0.819	7e-77
Q9STS1	503	Betaine aldehyde dehydrog	no	no	0.987	0.320	0.770	5e-72
O04895	501	Betaine aldehyde dehydrog	N/A	no	0.987	0.321	0.782	8e-66
P17202	497	Betaine aldehyde dehydrog	N/A	no	0.969	0.317	0.714	2e-63
P42757	502	Betaine aldehyde dehydrog	N/A	no	0.981	0.318	0.725	5e-63
P28237	500	Betaine aldehyde dehydrog	N/A	no	0.987	0.322	0.714	9e-63
O24174	505	Betaine aldehyde dehydrog	yes	no	1.0	0.322	0.711	1e-62
Q40024	505	Betaine aldehyde dehydrog	N/A	no	0.981	0.316	0.680	4e-56
O59808	500	Probable betaine aldehyde	yes	no	0.926	0.302	0.402	8e-24
Q5R6B5	517	Aldehyde dehydrogenase X,	yes	no	0.920	0.290	0.383	5e-23

>sp|Q9S795|BADH1_ARATH Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1

 Score =  285 bits (730), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 132/161 (81%), Positives = 153/161 (95%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAIP+P+RQLFI+GEWREP+LKKRIPIVNP TEE++GDIPAAT EDV++AV+AAR+ALSR
Sbjct: 1   MAIPMPTRQLFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKGKDW+ A GA RAKYLRAIAAK+ ERK++LA LE +DCGKPL+EAVWD+DDVAGCFE+
Sbjct: 61  NKGKDWAKAPGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEF 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAEGLDAKQKAPVSLPME+FKSYVLK+P+GVVGLITPW
Sbjct: 121 YADLAEGLDAKQKAPVSLPMESFKSYVLKQPLGVVGLITPW 161

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 8

>sp|Q9STS1|BADH2_ARATH Betaine aldehyde dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=ALDH10A9 PE=2 SV=1

 Score =  269 bits (688), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 124/161 (77%), Positives = 144/161 (89%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAI +P RQLFI G+W EPVL+K +P+VNP TE+I+G IPAAT+EDVELAV+AAR+A +R
Sbjct: 1   MAITVPRRQLFIGGQWTEPVLRKTLPVVNPATEDIIGYIPAATSEDVELAVEAARKAFTR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           N GKDW+ A+GA RAKYLRAIAAK+ ERKSELANLE IDCGKPL+EA WD+DDVAGCFEY
Sbjct: 61  NNGKDWARATGAVRAKYLRAIAAKVIERKSELANLEAIDCGKPLDEAAWDMDDVAGCFEY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAEGLDAKQK P+SLPM+ FK Y+LKEPIGVVG+ITPW
Sbjct: 121 YADLAEGLDAKQKTPLSLPMDTFKGYILKEPIGVVGMITPW 161

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|O04895|BADH_AMAHP Betaine aldehyde dehydrogenase, chloroplastic OS=Amaranthus hypochondriacus GN=BADH4 PE=3 SV=1

 Score =  248 bits (634), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 126/161 (78%), Positives = 144/161 (89%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAI +PSRQLFI+GEWREP+ K RIPI+NP+TEEI+GDIPAATAEDVELAV AAR+AL R
Sbjct: 1   MAIRVPSRQLFIDGEWREPIKKNRIPIINPSTEEIIGDIPAATAEDVELAVAAARRALKR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKG+DW+SASGA RAKYLRAIAAKITE+K   A LE +DCGKPL+EA  DIDDVAGCFEY
Sbjct: 61  NKGEDWASASGAHRAKYLRAIAAKITEKKDYFAKLEAMDCGKPLDEAARDIDDVAGCFEY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YAD AE LDAKQKAP++LPM+ FK +VLK+PIGVVGLI+PW
Sbjct: 121 YADQAEALDAKQKAPIALPMDTFKCHVLKQPIGVVGLISPW 161

Amaranthus hypochondriacus (taxid: 28502)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P17202|BADH_SPIOL Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1

 Score =  241 bits (614), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 115/161 (71%), Positives = 135/161 (83%), Gaps = 3/161 (1%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MA PIP+RQLFI+GEWREP+ K RIP++NP+TEEI+GDIPAATAEDVE+AV AAR+A  R
Sbjct: 1   MAFPIPARQLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           N   +WS+ SGA RA YLRAIAAKITE+K     LETID GKP +EAV DIDDVA CFEY
Sbjct: 61  N---NWSATSGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEY 117

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           +A  AE LD KQKAPV+LPME FKS+VL++P+GVVGLI+PW
Sbjct: 118 FAGQAEALDGKQKAPVTLPMERFKSHVLRQPLGVVGLISPW 158

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P42757|BADH_ATRHO Betaine aldehyde dehydrogenase, chloroplastic OS=Atriplex hortensis PE=2 SV=1

 Score =  239 bits (610), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 119/164 (72%), Positives = 139/164 (84%), Gaps = 4/164 (2%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MA PIP+RQLFI+GEWREP+LK RIPI+NP+TEEI+GDIPAATAEDVE+AV AAR+A  R
Sbjct: 1   MAFPIPARQLFIDGEWREPLLKNRIPIINPSTEEIIGDIPAATAEDVEVAVVAARKAFKR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGC--- 119
           NKG+DW +A  + RAKYLRAIAAKITE+K     LET+D GKP +EAV DIDDVA C   
Sbjct: 61  NKGRDW-AALWSHRAKYLRAIAAKITEKKDHFVKLETLDSGKPRDEAVLDIDDVATCFEY 119

Query: 120 FEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           FEY+A  AE LDAKQKAPV+LPME FKS+VL++PIGVVGLI+PW
Sbjct: 120 FEYFAGQAEALDAKQKAPVTLPMERFKSHVLRQPIGVVGLISPW 163

Atriplex hortensis (taxid: 34272)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P28237|BADH_BETVU Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2 SV=1

 Score =  238 bits (608), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 115/161 (71%), Positives = 140/161 (86%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           M++PIPSRQLFI+GEWREP+ K RIPI+NP+ EEI+GDIPA ++ED+E+AV AAR+AL R
Sbjct: 1   MSMPIPSRQLFIDGEWREPIKKNRIPIINPSNEEIIGDIPAGSSEDIEVAVAAARRALKR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKG++W++ SGA RA+YLRAIAAK+TERK     LETID GKP +EAV DIDDVA CFEY
Sbjct: 61  NKGREWAATSGAHRARYLRAIAAKVTERKDHFVKLETIDSGKPFDEAVLDIDDVATCFEY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           +A  AE +DAKQKAPV+LPME FKS+VL++PIGVVGLITPW
Sbjct: 121 FAGQAEAMDAKQKAPVTLPMERFKSHVLRQPIGVVGLITPW 161

Beta vulgaris (taxid: 161934)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|O24174|BADH_ORYSJ Betaine aldehyde dehydrogenase OS=Oryza sativa subsp. japonica GN=Os04g0464200 PE=2 SV=1

 Score =  238 bits (607), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 116/163 (71%), Positives = 132/163 (80%)

Query: 1   MAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQAL 60
           MA    IP R LFI G WREP L +R+P+VNP TE  +GDIPAATAEDVELAV AAR A 
Sbjct: 1   MAAPSAIPRRGLFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAF 60

Query: 61  SRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCF 120
            R+ G+ WS A GA RAKYL+AIAAKI ++KS LA LET+D GKPL+EA  D++DVA CF
Sbjct: 61  GRDGGRHWSRAPGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPLDEAAGDMEDVAACF 120

Query: 121 EYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           EYYADLAE LD KQ+AP+SLPMENF+SYVLKEPIGVVGLITPW
Sbjct: 121 EYYADLAEALDGKQRAPISLPMENFESYVLKEPIGVVGLITPW 163

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q40024|BADH_HORVU Betaine aldehyde dehydrogenase OS=Hordeum vulgare PE=2 SV=1

 Score =  216 bits (551), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 111/163 (68%), Positives = 127/163 (77%), Gaps = 3/163 (1%)

Query: 3   MAIP--IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQAL 60
           MA P  IP R LFI G WREP L + IP++NP TE+ +GDIPAATAEDVELAV A    L
Sbjct: 1   MAAPPAIPRRGLFIGGGWREPTLGRHIPVINPATEDTIGDIPAATAEDVELAVAAGGPVL 60

Query: 61  SRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCF 120
           +R + + W+ ASGA RAKYL AIAAKIT + + LA LET+D GKP +EAV D+DDVA CF
Sbjct: 61  ARRR-EPWARASGATRAKYLNAIAAKITGKIAYLALLETVDSGKPKDEAVADMDDVAACF 119

Query: 121 EYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           EYYA LAE LD KQ AP+SLPME FK+YVLKEPIGVVGLITPW
Sbjct: 120 EYYAALAEALDGKQHAPISLPMEEFKTYVLKEPIGVVGLITPW 162

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|O59808|BADH_SCHPO Probable betaine aldehyde dehydrogenase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=meu8 PE=2 SV=1

 Score =  109 bits (272), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 93/159 (58%), Gaps = 8/159 (5%)

Query: 8   PSRQLFINGEWREPV--LKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKG 65
           P   LFI+G++  P+    K IP++NP TEEI+G    A+A+DV+ AV+ A       + 
Sbjct: 19  PENSLFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF---RS 75

Query: 66  KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYAD 125
             W+   G  R   LR IA  + E++  LA ++TI+CGKP   A++DID  A  FEYYA+
Sbjct: 76  GIWAKWPGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAE 135

Query: 126 LAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           +AE  +   K P  LP    F ++  + P GV+G+ITPW
Sbjct: 136 VAETDNPTVKVP--LPNNPGFCAFEKRFPRGVIGVITPW 172

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q5R6B5|AL1B1_PONAB Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1

 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 86/159 (54%), Gaps = 9/159 (5%)

Query: 7   IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGK 66
           IP  QLFIN EW++ V KK  P VNPTT E++G +      DV+ AV AAR+A     G 
Sbjct: 34  IPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDRAVKAAREAF--RLGS 91

Query: 67  DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYAD 125
            W     + R + L  +A  +   +  LA+LET+D GKP +E+   D+D+V   + Y+A 
Sbjct: 92  PWRRMDASERGRLLNCLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVYRYFAG 151

Query: 126 LAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
            A+    K     ++PM+     +   EPIGV G I PW
Sbjct: 152 WADKWHGK-----TIPMDGQHFCFTRHEPIGVCGQIIPW 185

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
341579690	503	betaine-aldehyde dehydrogenase [Cucumis	0.987	0.320	0.881	3e-78
449440720	503	PREDICTED: betaine aldehyde dehydrogenas	0.987	0.320	0.869	4e-77
224135733	503	predicted protein [Populus trichocarpa]	0.987	0.320	0.844	4e-76
119336424	502	betaine-aldehyde dehydrogenase [Chorispo	0.987	0.320	0.832	5e-76
321272538	503	betaine-aldehyde dehydrogenase [Corylus	0.987	0.320	0.857	1e-75
18410730	501	betaine aldehyde dehydrogenase 1 [Arabid	0.987	0.321	0.819	4e-75
375333773	503	betaine aldehyde dehydrogenase [Populus	0.987	0.320	0.838	4e-75
255540797	503	betaine-aldehyde dehydrogenase, putative	0.987	0.320	0.826	2e-74
428230422	521	betaine aldehyde dehydrogenase 1 [Jatrop	0.987	0.309	0.832	3e-74
297842237	501	ALDH10A8 [Arabidopsis lyrata subsp. lyra	0.987	0.321	0.807	4e-74

>gi|341579690|gb|AEK81574.1| betaine-aldehyde dehydrogenase [Cucumis melo]

 Score =  295 bits (756), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 142/161 (88%), Positives = 153/161 (95%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAI IP+RQLFI+GEWREPVLKKRIP++NPTTEE +G IPAATAEDVELAVDAAR+AL+R
Sbjct: 1   MAISIPTRQLFIDGEWREPVLKKRIPVINPTTEETIGSIPAATAEDVELAVDAARKALAR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKGKDWSSASGA RAKYLRAIAAKITERK ELA LE+IDCGKPLEEA WD+DDVAGCF+Y
Sbjct: 61  NKGKDWSSASGAVRAKYLRAIAAKITERKPELAKLESIDCGKPLEEAAWDMDDVAGCFDY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAEGLDAKQKAPVSLPM+ FKSYVLKEPIGVVGLITPW
Sbjct: 121 YADLAEGLDAKQKAPVSLPMDTFKSYVLKEPIGVVGLITPW 161

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440720|ref|XP_004138132.1| PREDICTED: betaine aldehyde dehydrogenase 1, chloroplastic-like [Cucumis sativus] gi|449518394|ref|XP_004166227.1| PREDICTED: LOW QUALITY PROTEIN: betaine aldehyde dehydrogenase 1, chloroplastic-like [Cucumis sativus]

 Score =  292 bits (747), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 140/161 (86%), Positives = 151/161 (93%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAI IP+RQLFI+GEWREPVLKKRIP++NPTTEE +G IPAATAEDVELAVDAAR+AL+R
Sbjct: 1   MAISIPTRQLFIDGEWREPVLKKRIPVINPTTEETIGSIPAATAEDVELAVDAARKALAR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKGKDW SASGA RAKYLRAIAAKITERKSELA LE IDCGKPLEEA WD+DDVAGCF+Y
Sbjct: 61  NKGKDWRSASGAVRAKYLRAIAAKITERKSELAKLEAIDCGKPLEEAAWDMDDVAGCFDY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAEGLDAKQKAPV +PM+ FKSYVLKEPIGVVGLITPW
Sbjct: 121 YADLAEGLDAKQKAPVDVPMDTFKSYVLKEPIGVVGLITPW 161

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135733|ref|XP_002322147.1| predicted protein [Populus trichocarpa] gi|222869143|gb|EEF06274.1| predicted protein [Populus trichocarpa]

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 136/161 (84%), Positives = 151/161 (93%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAI +P RQLFI+GEWREPVLKKRIP++NP TE+IVGDIPAATAEDVE+AV+AAR+A SR
Sbjct: 1   MAIHLPIRQLFIDGEWREPVLKKRIPVINPATEQIVGDIPAATAEDVEIAVEAARKAFSR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKG+DWSS SGA+RAKYLRAIAAKITE+KSEL  LE IDCGKPL+EA+WD+DDVAGCFEY
Sbjct: 61  NKGQDWSSTSGAYRAKYLRAIAAKITEKKSELGKLEVIDCGKPLDEALWDMDDVAGCFEY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAEGLDAKQKAPVSLPME FKSYVLKEP+GVV LITPW
Sbjct: 121 YADLAEGLDAKQKAPVSLPMETFKSYVLKEPLGVVALITPW 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|119336424|gb|AAV67891.2| betaine-aldehyde dehydrogenase [Chorispora bungeana]

 Score =  288 bits (737), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 134/161 (83%), Positives = 153/161 (95%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAIP+P+RQLFI+GEWREP+LKKRIPIVNP TEE++GDIPAAT EDVE+AV+AAR+A SR
Sbjct: 1   MAIPMPTRQLFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVEVAVNAARRAFSR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKGKDW+ A GA RAK+LRAIAAK+TERKS+LA LE +DCGKPL+EAVWD++DVAGCFE+
Sbjct: 61  NKGKDWAKAPGALRAKHLRAIAAKVTERKSDLAKLEALDCGKPLDEAVWDMEDVAGCFEF 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAEGLDAKQKAPVSLPMENFKSYVLK+PIGVVGLITPW
Sbjct: 121 YADLAEGLDAKQKAPVSLPMENFKSYVLKQPIGVVGLITPW 161

Source: Chorispora bungeana

Species: Chorispora bungeana

Genus: Chorispora

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|321272538|gb|ADW80331.1| betaine-aldehyde dehydrogenase [Corylus heterophylla]

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 138/161 (85%), Positives = 152/161 (94%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAIPIPSRQLFI+GEWREP L+KR PIVNP+TEEIVGDIPAATAEDVE+AVDAAR+AL+R
Sbjct: 1   MAIPIPSRQLFIDGEWREPALRKRFPIVNPSTEEIVGDIPAATAEDVEIAVDAARRALAR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKG+DW+SA GA RAKYLRAIAAKITERKS+LA LE ID GKPL+EA WDIDDVAGCFEY
Sbjct: 61  NKGRDWASAPGAVRAKYLRAIAAKITERKSKLAKLEAIDSGKPLDEAAWDIDDVAGCFEY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLA+GLDAKQKAPV+LPME FKSYVL+EP+GVVGLITPW
Sbjct: 121 YADLADGLDAKQKAPVALPMETFKSYVLQEPMGVVGLITPW 161

Source: Corylus heterophylla

Species: Corylus heterophylla

Genus: Corylus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18410730|ref|NP_565094.1| betaine aldehyde dehydrogenase 1 [Arabidopsis thaliana] gi|21759093|sp|Q9S795.1|BADH1_ARATH RecName: Full=Betaine aldehyde dehydrogenase 1, chloroplastic; Short=BADH; AltName: Full=Aldehyde dehydrogenase family 10 member A8; Flags: Precursor gi|5882731|gb|AAD55284.1|AC008263_15 Similar to gb|AF000132 betaine aldehyde dehydrogenase from Amaranthus hypochondriacus. ESTs gb|T20662, gb|R90254, gb|AA651436 and gb|AA586226 come from this gene [Arabidopsis thaliana] gi|12323912|gb|AAG51938.1|AC013258_32 putative betaine aldehyde dehydrogenase; 60794-64192 [Arabidopsis thaliana] gi|20260344|gb|AAM13070.1| similar to betaine aldehyde dehydrogenase [Arabidopsis thaliana] gi|21592995|gb|AAM64944.1| betaine aldehyde dehydrogenase, putative [Arabidopsis thaliana] gi|31711910|gb|AAP68311.1| At1g74920 [Arabidopsis thaliana] gi|332197528|gb|AEE35649.1| betaine aldehyde dehydrogenase 1 [Arabidopsis thaliana]

 Score =  285 bits (730), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 132/161 (81%), Positives = 153/161 (95%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAIP+P+RQLFI+GEWREP+LKKRIPIVNP TEE++GDIPAAT EDV++AV+AAR+ALSR
Sbjct: 1   MAIPMPTRQLFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKGKDW+ A GA RAKYLRAIAAK+ ERK++LA LE +DCGKPL+EAVWD+DDVAGCFE+
Sbjct: 61  NKGKDWAKAPGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEF 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAEGLDAKQKAPVSLPME+FKSYVLK+P+GVVGLITPW
Sbjct: 121 YADLAEGLDAKQKAPVSLPMESFKSYVLKQPLGVVGLITPW 161

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|375333773|gb|AFA53117.1| betaine aldehyde dehydrogenase [Populus euphratica]

 Score =  285 bits (729), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 135/161 (83%), Positives = 149/161 (92%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAI +P RQLFI+GEWREP+LKKRIPI+NP TE+IVGDIPAATAEDVE+AV AAR+A SR
Sbjct: 1   MAIHLPIRQLFIDGEWREPLLKKRIPIINPATEQIVGDIPAATAEDVEIAVQAARKAFSR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKG+DW S SGA+RAKYLRAIAAKITE+KSEL  LE IDCGKPL+EA+WD+DDVAGCFEY
Sbjct: 61  NKGQDWPSTSGAYRAKYLRAIAAKITEKKSELGKLEVIDCGKPLDEALWDMDDVAGCFEY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAEGLDAKQKAPVSLPME FKSYVLKEP+GVV LITPW
Sbjct: 121 YADLAEGLDAKQKAPVSLPMETFKSYVLKEPLGVVALITPW 161

Source: Populus euphratica

Species: Populus euphratica

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540797|ref|XP_002511463.1| betaine-aldehyde dehydrogenase, putative [Ricinus communis] gi|223550578|gb|EEF52065.1| betaine-aldehyde dehydrogenase, putative [Ricinus communis]

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 133/161 (82%), Positives = 148/161 (91%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAIP+P+RQLFINGEWREPVLKKRIP++NP+TEEI+GDIPAATAEDVE+AV+AA  A  R
Sbjct: 1   MAIPVPNRQLFINGEWREPVLKKRIPVINPSTEEIIGDIPAATAEDVEVAVEAAHNAFYR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKGKDW+  SGAFRAKYLRAI+AKITE+KSELA LE IDCGKP +EA WDIDDVAGCF+Y
Sbjct: 61  NKGKDWAYTSGAFRAKYLRAISAKITEKKSELAKLEAIDCGKPYDEAAWDIDDVAGCFDY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YA LAEGLDAKQKAPVSLPME FKS+VLKEP+GVV LITPW
Sbjct: 121 YAGLAEGLDAKQKAPVSLPMETFKSHVLKEPLGVVALITPW 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|428230422|gb|AFY98894.1| betaine aldehyde dehydrogenase 1 [Jatropha curcas]

 Score =  282 bits (721), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 134/161 (83%), Positives = 148/161 (91%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MA PIP+RQLFI GEWREPVLKKRIPI+NP+TEE +GDIPAATAEDVE+AV+AA++A +R
Sbjct: 1   MAFPIPNRQLFIGGEWREPVLKKRIPIINPSTEESIGDIPAATAEDVEIAVEAAQKAFTR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKG+DW+  SGA RAKYLRAIAAKITE+K+ELA LE IDCGKPL+EA WDIDDVAGCFEY
Sbjct: 61  NKGRDWAFTSGAVRAKYLRAIAAKITEKKAELAKLEAIDCGKPLDEAAWDIDDVAGCFEY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YA LAEGLDAKQKAPVSLPME FKSYVLKEPIGVV LITPW
Sbjct: 121 YAGLAEGLDAKQKAPVSLPMETFKSYVLKEPIGVVALITPW 161

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842237|ref|XP_002889000.1| ALDH10A8 [Arabidopsis lyrata subsp. lyrata] gi|297334841|gb|EFH65259.1| ALDH10A8 [Arabidopsis lyrata subsp. lyrata]

 Score =  282 bits (721), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 130/161 (80%), Positives = 151/161 (93%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAIP+P+RQLFI+GEWREP+LKKRIPIVNP TEE++GDIPAAT EDVE AV+AAR+A SR
Sbjct: 1   MAIPVPTRQLFIDGEWREPILKKRIPIVNPATEELIGDIPAATTEDVEAAVNAARRAFSR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKGKDW+ A GA RAK+LRAIAAK+ ERK++LA LE +DCGKPL+EAVWD+DDVAGCFE+
Sbjct: 61  NKGKDWAKAPGAVRAKFLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEF 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAEGLDAKQKAPVSLPM++FKSYVLK+P+GVVGLITPW
Sbjct: 121 YADLAEGLDAKQKAPVSLPMDSFKSYVLKQPLGVVGLITPW 161

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
TAIR|locus:2027186	501	ALDH10A8 "AT1G74920" [Arabidop	0.987	0.321	0.819	6.7e-72
TAIR|locus:2100449	503	ALDH10A9 "AT3G48170" [Arabidop	0.987	0.320	0.770	2.4e-67
TIGR_CMR|CPS_0096	491	CPS_0096 "betaine aldehyde deh	0.907	0.301	0.470	1.8e-32
UNIPROTKB|Q4K791	482	gbsA "Betaine-aldehyde dehydro	0.889	0.300	0.453	4.3e-29
UNIPROTKB|Q4KCL5	476	PFL_2912 "Putative betaine-ald	0.895	0.306	0.427	9.6e-25
POMBASE|SPCC550.10	500	meu8 "aldehyde dehydrogenase M	0.926	0.302	0.402	7.3e-24
MGI|MGI:1919785	519	Aldh1b1 "aldehyde dehydrogenas	0.944	0.296	0.382	1.4e-22
RGD|1306737	519	Aldh1b1 "aldehyde dehydrogenas	0.944	0.296	0.388	1.8e-22
UNIPROTKB|P30837	517	ALDH1B1 "Aldehyde dehydrogenas	0.920	0.290	0.377	2.9e-22
UNIPROTKB|F8VP50	245	F8VP50 "Uncharacterized protei	0.895	0.595	0.380	1.5e-21

TAIR|locus:2027186 ALDH10A8 "AT1G74920" [Arabidopsis thaliana (taxid:3702)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 132/161 (81%), Positives = 153/161 (95%)

Query:     3 MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
             MAIP+P+RQLFI+GEWREP+LKKRIPIVNP TEE++GDIPAAT EDV++AV+AAR+ALSR
Sbjct:     1 MAIPMPTRQLFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSR 60

Query:    63 NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
             NKGKDW+ A GA RAKYLRAIAAK+ ERK++LA LE +DCGKPL+EAVWD+DDVAGCFE+
Sbjct:    61 NKGKDWAKAPGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEF 120

Query:   123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             YADLAEGLDAKQKAPVSLPME+FKSYVLK+P+GVVGLITPW
Sbjct:   121 YADLAEGLDAKQKAPVSLPMESFKSYVLKQPLGVVGLITPW 161

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009516 "leucoplast" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2100449 ALDH10A9 "AT3G48170" [Arabidopsis thaliana (taxid:3702)]

 Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
 Identities = 124/161 (77%), Positives = 144/161 (89%)

Query:     3 MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
             MAI +P RQLFI G+W EPVL+K +P+VNP TE+I+G IPAAT+EDVELAV+AAR+A +R
Sbjct:     1 MAITVPRRQLFIGGQWTEPVLRKTLPVVNPATEDIIGYIPAATSEDVELAVEAARKAFTR 60

Query:    63 NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
             N GKDW+ A+GA RAKYLRAIAAK+ ERKSELANLE IDCGKPL+EA WD+DDVAGCFEY
Sbjct:    61 NNGKDWARATGAVRAKYLRAIAAKVIERKSELANLEAIDCGKPLDEAAWDMDDVAGCFEY 120

Query:   123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             YADLAEGLDAKQK P+SLPM+ FK Y+LKEPIGVVG+ITPW
Sbjct:   121 YADLAEGLDAKQKTPLSLPMDTFKGYILKEPIGVVGMITPW 161

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA;IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IDA

GO:0008802 "betaine-aldehyde dehydrogenase activity" evidence=IDA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0005829 "cytosol" evidence=RCA

GO:0046685 "response to arsenic-containing substance" evidence=RCA

TIGR_CMR|CPS_0096 CPS_0096 "betaine aldehyde dehydrogenase" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 71/151 (47%), Positives = 89/151 (58%)

Query:    13 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
             +ING W  P   +   ++NP TE ++ +IPA  + D++ AV AAR A  +     W   S
Sbjct:     6 YINGTWVSPATSETFSVINPATEAVIAEIPAGNSVDIDAAVKAARTAFDQGP---WPRLS 62

Query:    73 GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
             GA RA YLR IAA I  R  ELA LE +D GKP  EA WDI+D A  FE+YA LAE LD 
Sbjct:    63 GAERAVYLRKIAAIIIRRLDELAKLEVLDNGKPYPEAKWDIEDTAATFEFYAGLAEQLDN 122

Query:   133 KQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
               +  + LP   F S  +KEP+GV G I PW
Sbjct:   123 TSEQVIELPEPGFSSKAIKEPLGVAGAIIPW 153

GO:0006578 "amino-acid betaine biosynthetic process" evidence=ISS

GO:0008802 "betaine-aldehyde dehydrogenase activity" evidence=ISS

UNIPROTKB|Q4K791 gbsA "Betaine-aldehyde dehydrogenase" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 324 (119.1 bits), Expect = 4.3e-29, P = 4.3e-29
 Identities = 69/152 (45%), Positives = 96/152 (63%)

Query:    12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
             L+I+G+W      + + ++NP+TE ++  +     E VE A+ AA   L+R     WS +
Sbjct:    10 LYIDGQWLAG--SEHLQVINPSTEGVLAQVAGGGPEAVEQALCAASAGLAR-----WSHS 62

Query:    72 SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD 131
             SGA RA  LR IAA + ER+ +L +L++ + GKP  EA  D+DDV   FEYYA LAEGLD
Sbjct:    63 SGAERAAVLRRIAAGVAERREQLMHLQSSNNGKPQFEAAMDVDDVIATFEYYAGLAEGLD 122

Query:   132 AKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             A Q A V+LP E F + + +EP G+VGLI PW
Sbjct:   123 AAQDANVALPSEAFSARLRREPCGIVGLIVPW 154

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0006578 "amino-acid betaine biosynthetic process" evidence=ISS

UNIPROTKB|Q4KCL5 PFL_2912 "Putative betaine-aldehyde dehydrogenase" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 286 (105.7 bits), Expect = 9.6e-25, P = 9.6e-25
 Identities = 65/152 (42%), Positives = 89/152 (58%)

Query:    12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
             LFI+G W +      +P+ +P+  +I+  +PAA+A  V LAV AAR+AL       W S 
Sbjct:     5 LFIDGHWVDGD-GAPMPVHDPSLGQIMAQVPAASAHQVNLAVQAARRALP-----GWRSL 58

Query:    72 SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD 131
             SGA RA+YL+  A  + +R+  L  L+  + GKP  EA  D+DD    F+YYA LA  LD
Sbjct:    59 SGARRAEYLQGFARHLQQRREGLIALQMRNNGKPRHEAELDLDDAIATFDYYAGLAAQLD 118

Query:   132 AKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             A+Q  PV L    F ++   E +GVVGLI PW
Sbjct:   119 ARQDQPVPLQAPGFSAHCRFEALGVVGLIVPW 150

GO:0006578 "amino-acid betaine biosynthetic process" evidence=ISS

GO:0008802 "betaine-aldehyde dehydrogenase activity" evidence=ISS

POMBASE|SPCC550.10 meu8 "aldehyde dehydrogenase Meu8 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 279 (103.3 bits), Expect = 7.3e-24, P = 7.3e-24
 Identities = 64/159 (40%), Positives = 93/159 (58%)

Query:     8 PSRQLFINGEWREPV--LKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKG 65
             P   LFI+G++  P+    K IP++NP TEEI+G    A+A+DV+ AV+ A       + 
Sbjct:    19 PENSLFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF---RS 75

Query:    66 KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYAD 125
               W+   G  R   LR IA  + E++  LA ++TI+CGKP   A++DID  A  FEYYA+
Sbjct:    76 GIWAKWPGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAE 135

Query:   126 LAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
             +AE  +   K P  LP    F ++  + P GV+G+ITPW
Sbjct:   136 VAETDNPTVKVP--LPNNPGFCAFEKRFPRGVIGVITPW 172

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0007126 "meiosis" evidence=IEP

GO:0008802 "betaine-aldehyde dehydrogenase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=ISM

GO:0033554 "cellular response to stress" evidence=IEP

MGI|MGI:1919785 Aldh1b1 "aldehyde dehydrogenase 1 family, member B1" [Mus musculus (taxid:10090)]

 Score = 268 (99.4 bits), Expect = 1.4e-22, P = 1.4e-22
 Identities = 65/170 (38%), Positives = 93/170 (54%)

Query:     2 AMAIPIPS-----RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
             A+  PIP+      +LFIN EW + V KK  P VNPTT E++G +      DV+LAV AA
Sbjct:    26 ALPNPIPNPEICYNKLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVKAA 85

Query:    57 RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDD 115
             R+A     G  W     + R + L  +A  +   +  LA+LET+D GKP +E+ V D+D+
Sbjct:    86 REAF--RLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDE 143

Query:   116 VAGCFEYYADLAEGLDAKQKAPVSLPM--ENFKSYVLKEPIGVVGLITPW 163
             V   + Y+A  A+    K     ++PM  E+F  +   EP+GV G I PW
Sbjct:   144 VIKVYRYFAGWADKWHGK-----TIPMDGEHF-CFTRHEPVGVCGQIIPW 187

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

RGD|1306737 Aldh1b1 "aldehyde dehydrogenase 1 family, member B1" [Rattus norvegicus (taxid:10116)]

 Score = 267 (99.0 bits), Expect = 1.8e-22, P = 1.8e-22
 Identities = 66/170 (38%), Positives = 92/170 (54%)

Query:     2 AMAIPIPS-----RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
             A+  PIP+      QLFIN EW + V KK  P VNPTT E++G +      DV+LAV AA
Sbjct:    26 ALPNPIPNPEIRYNQLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVRAA 85

Query:    57 RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDD 115
             R+A     G  W     + R + L  +A  +   +  LA+LET+D GKP +E+ V D+D+
Sbjct:    86 REAF--RLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDE 143

Query:   116 VAGCFEYYADLAEGLDAKQKAPVSLPM--ENFKSYVLKEPIGVVGLITPW 163
             V   + Y A  A+    K     ++PM  E+F  +   EP+GV G I PW
Sbjct:   144 VIKVYRYLAGWADKWHGK-----TIPMDGEHF-CFTRHEPVGVCGQIIPW 187

GO:0003674 "molecular_function" evidence=ND

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|P30837 ALDH1B1 "Aldehyde dehydrogenase X, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 265 (98.3 bits), Expect = 2.9e-22, P = 2.9e-22
 Identities = 60/159 (37%), Positives = 86/159 (54%)

Query:     7 IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGK 66
             IP  QLFIN EW++ V KK  P VNPTT E++G +      DV+ AV AAR+A     G 
Sbjct:    34 IPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDRAVKAAREAF--RLGS 91

Query:    67 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYAD 125
              W     + R + L  +A  +   +  LA+LET+D GKP +E+   D+D+V   + Y+A 
Sbjct:    92 PWRRMDASERGRLLNLLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVYRYFAG 151

Query:   126 LAEGLDAKQKAPVSLPMENFK-SYVLKEPIGVVGLITPW 163
              A+    K     ++PM+     +   EP+GV G I PW
Sbjct:   152 WADKWHGK-----TIPMDGQHFCFTRHEPVGVCGQIIPW 185

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=NAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|F8VP50 F8VP50 "Uncharacterized protein" [Homo sapiens (taxid:9606)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 59/155 (38%), Positives = 83/155 (53%)

Query:    11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
             Q+FIN EW + V +K  P VNP+T E++  +     EDV+ AV AAR A     G  W  
Sbjct:    19 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL--GSPWRR 76

Query:    71 ASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDDVAGCFEYYADLAEG 129
                + R + L  +A  I   ++ LA LET+D GKP +   + D+D V  C  YYA  A+ 
Sbjct:    77 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 136

Query:   130 LDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
                K     ++P++ +F SY   EP+GV G I PW
Sbjct:   137 YHGK-----TIPIDGDFFSYTRHEPVGVCGQIIPW 166

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O24174	BADH_ORYSJ	1, ., 2, ., 1, ., 8	0.7116	1.0	0.3227	yes	no
Q9S795	BADH1_ARATH	1, ., 2, ., 1, ., 8	0.8198	0.9877	0.3213	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	1.2.1.41	LOW CONFIDENCE prediction!
3rd Layer	1.2.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	grail3.0005005501	3-chloroallyl aldehyde dehydrogenase (EC-1.2.1.8) (503 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.4238.2.1	Predicted protein (532 aa)	•					•	•		0.405

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	163
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	1e-108
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	4e-65
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	3e-47
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	1e-41
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	4e-40
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	8e-38
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	6e-35
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	2e-34
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	2e-34
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	5e-33
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	8e-33
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	4e-32
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	6e-32
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	6e-32
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	1e-31
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	2e-31
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	4e-31
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	3e-30
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	5e-30
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	7e-29
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	1e-28
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	4e-28
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	1e-27
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	3e-27
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	3e-27
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	1e-26
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	1e-26
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	1e-26
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	2e-26
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	4e-26
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	7e-26
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	7e-26
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	1e-25
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	3e-25
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	5e-25
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	1e-24
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	1e-24
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	2e-24
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	3e-24
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	3e-24
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	3e-23
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	4e-22
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	1e-21
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	1e-21
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	2e-21
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	9e-21
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	2e-20
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	6e-20
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	7e-20
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	7e-20
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	1e-19
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	1e-19
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	2e-19
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	2e-19
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	2e-19
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	1e-18
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	1e-17
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	1e-17
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	3e-17
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	9e-17
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	8e-16
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	1e-15
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	2e-15
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	3e-15
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	5e-15
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	6e-15
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	4e-14
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	9e-14
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	1e-13
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	2e-13
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	2e-12
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	2e-12
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	8e-12
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	1e-11
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	4e-11
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	4e-11
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	5e-11
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	1e-10
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	2e-10
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	3e-10
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	5e-09
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	6e-09
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	8e-09
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	2e-08
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	8e-08
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	4e-07
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	6e-07
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	8e-07
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	3e-06
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	4e-06
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	2e-05
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	2e-05
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	1e-04
cd07129	454	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh	6e-04
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	6e-04
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	7e-04
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	0.002

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score =  316 bits (812), Expect = e-108
 Identities = 133/161 (82%), Positives = 145/161 (90%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAIP+P RQLFI GEWREPVL KRIP+VNP TEE +GDIPAATAEDV+ AV+AAR+A  R
Sbjct: 1   MAIPVPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKGKDW+  +GA RAKYLRAIAAKITERKSELA LET+DCGKPL+EA WD+DDVAGCFEY
Sbjct: 61  NKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAE LDAKQKAPVSLPME FK YVLKEP+GVVGLITPW
Sbjct: 121 YADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPW 161

Length = 503

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  205 bits (523), Expect = 4e-65
 Identities = 86/135 (63%), Positives = 102/135 (75%), Gaps = 5/135 (3%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
           ++NP TE  +G+IPAATAEDV+ AV AAR+A  R     W   +GA RAKYLRAIA  + 
Sbjct: 1   VINPATEATIGEIPAATAEDVDAAVRAARRAFPR-----WKKTTGAERAKYLRAIAEGVR 55

Query: 89  ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSY 148
           ER+ ELA LE  D GKPL+EA WD+DDVAGCFEYYADLAE LDAK +  V LP E+FK+ 
Sbjct: 56  ERREELAELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKAR 115

Query: 149 VLKEPIGVVGLITPW 163
           V +EP+GVVGLITPW
Sbjct: 116 VRREPVGVVGLITPW 130

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score =  159 bits (404), Expect = 3e-47
 Identities = 64/151 (42%), Positives = 83/151 (54%), Gaps = 7/151 (4%)

Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           +I+GEW E    K   I+NP   E++  +P  TAED + A+ AAR+A       +W    
Sbjct: 1   YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFD---SGEWPHLP 57

Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              RA  L  IA KI E   ELA LET++ GK L E+  DIDDVA CF YYA LA   + 
Sbjct: 58  AQERAALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATK-ET 116

Query: 133 KQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            +   V   +    S  ++EP+GV GLITPW
Sbjct: 117 GEVYDVPPHVI---SRTVREPVGVCGLITPW 144

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  144 bits (365), Expect = 1e-41
 Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 12/147 (8%)

Query: 18  WREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRA 77
           W +   +  I ++NP T E++  +PAATAEDV+ AV AAR A      K W+    + RA
Sbjct: 1   WVDSSSE-TIEVINPATGEVIATVPAATAEDVDAAVAAARAAF-----KAWAKTPPSERA 54

Query: 78  KYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAP 137
             L   A  + ER+ ELA LET++ GKPL EA  ++        YYA LA  L+ +    
Sbjct: 55  AILLKAADLLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGE---- 110

Query: 138 VSLPM-ENFKSYVLKEPIGVVGLITPW 163
            +LP      +Y  +EP+GVVG ITPW
Sbjct: 111 -TLPSDPGVLAYTRREPLGVVGAITPW 136

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  140 bits (355), Expect = 4e-40
 Identities = 61/155 (39%), Positives = 83/155 (53%), Gaps = 10/155 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
            LFIN E+ + V  K  P +NP TEE++  +  A  EDV+ AV AAR A    +   W  
Sbjct: 5   GLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAF---ETGWWRK 61

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEG 129
                R + L  +A  I   + ELA LE++D GKPLEE A  D+     C  YYA  A+ 
Sbjct: 62  MDPRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADK 121

Query: 130 LDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           +  K     ++P++ NF +Y  +EPIGV G I PW
Sbjct: 122 IQGK-----TIPIDGNFLAYTRREPIGVCGQIIPW 151

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  133 bits (338), Expect = 8e-38
 Identities = 63/153 (41%), Positives = 85/153 (55%), Gaps = 11/153 (7%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           +L I+GEW +      I ++NP T E++  +PAATAEDV+ AV AAR A      + WS 
Sbjct: 2   KLLIDGEWVDG--ASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAF-----EAWSR 54

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            S   RA  LR IA  +  R  ELA L T++ GKP+ EA  +I   A    YYA+ A  L
Sbjct: 55  LSAEERAAILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRL 114

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           + +         +  K+ V +EP+GVVG ITPW
Sbjct: 115 EGET----IPTDKGSKALVRREPLGVVGAITPW 143

Length = 472

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  126 bits (318), Expect = 6e-35
 Identities = 60/154 (38%), Positives = 78/154 (50%), Gaps = 14/154 (9%)

Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           +INGE+      + I ++NP T E+V  +PAATAED + AVDAA  A      K W    
Sbjct: 1   YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQ-----KAWERLP 55

Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA---EG 129
              RA YLR +A  I E   ELA L   + GK L  A  +++  A   +Y A+ A   EG
Sbjct: 56  AIERAAYLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEG 115

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
               +  P   P EN   ++ K PIGVV  I PW
Sbjct: 116 ----EIIPSDRPNENI--FIFKVPIGVVAGILPW 143

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  124 bits (314), Expect = 2e-34
 Identities = 54/137 (39%), Positives = 74/137 (54%), Gaps = 12/137 (8%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
             NP T E++  +P   A +V+ AV AA++A        WS  S A RA+ L  +A  I 
Sbjct: 1   NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAF-----PGWSRMSPAERARILHKVADLIE 55

Query: 89  ERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPME-NFK 146
            R  ELA LE++D GKP+  A   DI   A  F ++AD    LD +     S P +    
Sbjct: 56  ARADELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGE-----SYPQDGGAL 110

Query: 147 SYVLKEPIGVVGLITPW 163
           +YVL++P+GV GLITPW
Sbjct: 111 NYVLRQPVGVAGLITPW 127

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score =  124 bits (313), Expect = 2e-34
 Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 10/152 (6%)

Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           FI+GE+ E        I+NP   E++  + AAT EDVE A+ AAR+A       +W++ S
Sbjct: 1   FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQ-----GEWAAMS 55

Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLD 131
              R + LR  A  I ER  ELA LET+D GK L+E  V D+D  A  FE++A LA  L+
Sbjct: 56  PMERGRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALN 115

Query: 132 AKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            +    + L   +F +Y ++EP+GV   I  W
Sbjct: 116 GEI---IPLGGPSF-AYTIREPLGVCVGIGAW 143

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  121 bits (305), Expect = 5e-33
 Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 11/154 (7%)

Query: 12  LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
           LFIN E+ +    + I  VNP+T E++  + AA  EDV+ AV AAR+A        WS  
Sbjct: 10  LFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE----SWWSKV 65

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGL 130
           +G  R + L  +A  + + +  LA +E +D GKP    A+ D+D++     YYA  A+ +
Sbjct: 66  TGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKI 125

Query: 131 DAKQKAPVSLPMENFK-SYVLKEPIGVVGLITPW 163
             K     ++P    K +Y L EP GV G I PW
Sbjct: 126 QGK-----TIPTSPNKLAYTLHEPYGVCGQIIPW 154

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score =  120 bits (303), Expect = 8e-33
 Identities = 57/153 (37%), Positives = 74/153 (48%), Gaps = 7/153 (4%)

Query: 12  LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
           LFI G W  P   + I +V+P TEE+VG +P AT  DV+ AV AAR+A        W   
Sbjct: 1   LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFD---NGPWPRL 57

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGL 130
           S A RA  LR +A  +  R  ELA L T + G P+  +        A    YYA LA   
Sbjct: 58  SPAERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDF 117

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             +++ P           V +EP+GVV  I PW
Sbjct: 118 PFEERRP---GSGGGHVLVRREPVGVVAAIVPW 147

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score =  118 bits (299), Expect = 4e-32
 Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 14/153 (9%)

Query: 12  LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
            +I+G W  P   + I ++NP TEE++G +P  TA DV+ AV AAR+A        WS+ 
Sbjct: 1   FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPA-----WSAT 55

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGL 130
           S   RA  L  IA     R  ELA   T++ G P+  A    +    G     AD  +  
Sbjct: 56  SVEERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDF 115

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           + +++   SL        V++EPIGV GLITPW
Sbjct: 116 EFEERRGNSL--------VVREPIGVCGLITPW 140

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  118 bits (297), Expect = 6e-32
 Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 10/136 (7%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
           + +P+T E+   I    A DV+ AV AAR+A        W   S A R + L  IA  I 
Sbjct: 1   VFDPSTGEVFARIARGGAADVDRAVQAARRAFES----GWLRLSPAERGRLLLRIARLIR 56

Query: 89  ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPME-NFKS 147
           E   ELA LE++D GKPL +A  D++  A  FEYY   A+ L  +     ++P+   +  
Sbjct: 57  EHADELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGE-----TIPLGPGYFV 111

Query: 148 YVLKEPIGVVGLITPW 163
           Y ++EP GV G I PW
Sbjct: 112 YTVREPHGVTGHIIPW 127

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  118 bits (297), Expect = 6e-32
 Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
            +NP T E    +P A+A DV+ AV AAR A    +G  W   +   R K LR +A  I 
Sbjct: 1   SINPATGEPWARVPEASAADVDRAVAAARAAF---EGGAWRKLTPTERGKLLRRLADLIE 57

Query: 89  ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSY 148
               ELA LET D GK + E    +  +A  + YYA LA+ ++     PV     ++ ++
Sbjct: 58  ANAEELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEG-AVIPVDKG--DYLNF 114

Query: 149 VLKEPIGVVGLITPW 163
             +EP+GVV  ITPW
Sbjct: 115 TRREPLGVVAAITPW 129

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  117 bits (295), Expect = 1e-31
 Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 9/159 (5%)

Query: 7   IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGK 66
           I   ++FIN EW + V  K  P +NP T E + ++      DV+ AV AAR A     G 
Sbjct: 4   IKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKL--GS 61

Query: 67  DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYAD 125
            W +   + R + L  +A  I   ++ LA+LET+D GKP  ++ + D+        YYA 
Sbjct: 62  PWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAG 121

Query: 126 LAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
            A+ +  K     ++PM+ +F +Y   EP+GV G I PW
Sbjct: 122 WADKIHGK-----TIPMDGDFFTYTRHEPVGVCGQIIPW 155

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  116 bits (293), Expect = 2e-31
 Identities = 60/135 (44%), Positives = 79/135 (58%), Gaps = 9/135 (6%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
           ++ P T E++  +  A AEDV+LAV +A+ A      K+WS+ SG  R + LR  A  + 
Sbjct: 1   VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQ-----KEWSATSGMERGRILRKAADLLR 55

Query: 89  ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSY 148
           ER  E+A LETID GKP+EEA  DID  A C EYYA LA  L  +    V LP  +F +Y
Sbjct: 56  ERNDEIARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEH---VPLPGGSF-AY 111

Query: 149 VLKEPIGVVGLITPW 163
             +EP+GV   I  W
Sbjct: 112 TRREPLGVCAGIGAW 126

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score =  116 bits (292), Expect = 4e-31
 Identities = 62/154 (40%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
             FINGEW  P   +     NP   +++ +IP +TAEDV+LAVDAA +A      K W  
Sbjct: 2   DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAF-----KTWGK 56

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG 129
            S A RA  L  IA +I E    LA  ET+D GKP+ E +  DI      F Y+A +   
Sbjct: 57  TSVAERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRA 116

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
               Q+  +S   E+  SY   EP+GVVG I PW
Sbjct: 117 ----QEGSLSEIDEDTLSYHFHEPLGVVGQIIPW 146

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  113 bits (286), Expect = 3e-30
 Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 8/135 (5%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
           ++NP T E++G++P A A D + A+DAA  A      K W   +   RA  LR  A  I 
Sbjct: 1   VINPATGEVIGEVPDAGAADADAAIDAAAAAF-----KTWRKTTARERAAILRRWADLIR 55

Query: 89  ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSY 148
           ER  +LA L T++ GKPL EA  ++D  A   E++A+ A  +  +    +  P    +  
Sbjct: 56  ERAEDLARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYGR---TIPSPAPGKRIL 112

Query: 149 VLKEPIGVVGLITPW 163
           V+K+P+GVV  ITPW
Sbjct: 113 VIKQPVGVVAAITPW 127

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  112 bits (282), Expect = 5e-30
 Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 8/112 (7%)

Query: 52  AVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW 111
           AV AAR A      K W++   A RA  LR +A  + ER+ ELA LET++ GKP+EEA+ 
Sbjct: 3   AVAAARAA-----FKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALG 57

Query: 112 DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           ++   A  F YYA LA  L  +       P     + V +EP+GVVG ITPW
Sbjct: 58  EVARAADTFRYYAGLARRLHGEVIPS---PDPGELAIVRREPLGVVGAITPW 106

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score =  109 bits (275), Expect = 7e-29
 Identities = 61/154 (39%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
            LFINGEW +    + I   NP   E + +I  AT  DV+ AV AA++A      K W  
Sbjct: 2   GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAF-----KTWRK 56

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEG 129
            + A RA  L  IA  I E K  LA +ET+D GKP+ E    DI   A  F Y+A +   
Sbjct: 57  TTVAERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRA 116

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
               ++   ++  E+  S VL+EPIGVVG I PW
Sbjct: 117 ----EEGSANMIDEDTLSIVLREPIGVVGQIIPW 146

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  109 bits (274), Expect = 1e-28
 Identities = 52/152 (34%), Positives = 69/152 (45%), Gaps = 11/152 (7%)

Query: 13  FINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
           +I+GEW            NP+ T ++VG    A+AED + A+ AA  A        W   
Sbjct: 4   YIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA-----WRRT 56

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD 131
           S   RA  L     ++  RK ELA L T + GK L EA  ++      F YYA   E L 
Sbjct: 57  SPEARADILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYA--GEALR 114

Query: 132 AKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
              +   S      +    +EP+GVVGLITPW
Sbjct: 115 LSGETLPST-RPGVEVETTREPLGVVGLITPW 145

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score =  107 bits (270), Expect = 4e-28
 Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 22/154 (14%)

Query: 12  LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
            FING+W +P  +K  P +NP T E++  +  A  EDV+ AV AAR A      + WS+ 
Sbjct: 24  HFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAF-----ESWSAL 78

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDID--DVAGCFEYYADLAEG 129
            G  RA++L  IA  I + +   A LE++D GKP+ E   D D   VA  F ++A  A+ 
Sbjct: 79  PGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRE-SRDCDIPLVARHFYHHAGWAQL 137

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           LD +                  +P+GVVG I PW
Sbjct: 138 LDTELAGW--------------KPVGVVGQIVPW 157

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  106 bits (268), Expect = 1e-27
 Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           +L INGE       ++ P+ NP T E++ +I  A+A  V+ AV AA  A       +WS 
Sbjct: 4   KLLINGELVA-GEGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAF-----PEWSQ 57

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG 129
            +   RA+ L  +A  I E   E A LE+++CGKPL  A+  +I  +   F ++A  A  
Sbjct: 58  TTPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARC 117

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           L+ K         E   S + ++P+GVV  I PW
Sbjct: 118 LEGKAAGEYL---EGHTSMIRRDPVGVVASIAPW 148

Length = 475

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score =  105 bits (263), Expect = 3e-27
 Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 10/155 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           +LFING++ +    K  P ++P   E++  +    AEDV+ AV AAR+A        W  
Sbjct: 5   KLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGP---WPR 61

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEG 129
            +G  R++ L   A  + +   ELA LET D GKP E+A + ++   A  F YYA  A+ 
Sbjct: 62  MTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADK 121

Query: 130 LDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           +        +LP +     Y L EPIGVVG I PW
Sbjct: 122 IHGM-----TLPADGPHHVYTLHEPIGVVGQIIPW 151

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  104 bits (261), Expect = 3e-27
 Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 8/110 (7%)

Query: 54  DAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDI 113
            AAR A      K W++   A RA  LR IA  + ER+ ELA LET++ GKP+EEA+ ++
Sbjct: 1   AAARAA-----FKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEV 55

Query: 114 DDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                 F Y A LA   D      +  P    ++YV +EP+GVVG+ITPW
Sbjct: 56  ARAIDTFRYAAGLA---DKLGGPELPSPDPGGEAYVRREPLGVVGVITPW 102

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  104 bits (261), Expect = 1e-26
 Identities = 47/153 (30%), Positives = 66/153 (43%), Gaps = 12/153 (7%)

Query: 12  LFINGEWREPVLKKRIPIVNP-TTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           L I G+      +++I   NP    E++G +  AT E+ E AV AAR A        W  
Sbjct: 35  LVIGGKEVR--TEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAF-----PTWRR 87

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
                RA+ L   AA +  R+ ELA    ++ GK   EA  D+ +     EYYA     L
Sbjct: 88  TPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRL 147

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                  V    +N   Y    P+GV  +I+PW
Sbjct: 148 RGFPVEMVPGE-DNRYVY---RPLGVGAVISPW 176

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 1e-26
 Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 10/157 (6%)

Query: 8   PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKD 67
           P + L+I+G + E    +   ++NP T E++  + AAT  DVE AV +A+Q       K 
Sbjct: 5   PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQ-----KI 59

Query: 68  WSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADL 126
           W++ +   R++ LR     + ER  ELA LET+D GKP++E  V DI   A   EYYA L
Sbjct: 60  WAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGL 119

Query: 127 AEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           A  L+ +Q   + L   +F  Y  +EP+GV   I  W
Sbjct: 120 APALEGEQ---IPLRGGSF-VYTRREPLGVCAGIGAW 152

Length = 488

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  103 bits (259), Expect = 1e-26
 Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 23/141 (16%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
           ++NP T E+    P A+   ++ AV AA+ A        WS+     R   L AIA  I 
Sbjct: 1   VINPATGEVFASAPVASEAQLDQAVAAAKAAF-----PGWSATPLEERRAALLAIADAIE 55

Query: 89  ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPME----- 143
               ELA L T++ GKPL EA +++        Y A L             LP E     
Sbjct: 56  ANAEELARLLTLEQGKPLAEAQFEVGGAVAWLRYTASL------------DLPDEVIEDD 103

Query: 144 -NFKSYVLKEPIGVVGLITPW 163
              +  + ++P+GVV  I PW
Sbjct: 104 DTRRVELRRKPLGVVAAIVPW 124

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  102 bits (257), Expect = 2e-26
 Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 9/152 (5%)

Query: 12  LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
            FI+GE+      +    ++P T E++G +    A DV+ A  AA++A      K W+  
Sbjct: 3   HFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAF-----KRWAEL 57

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD 131
             A R +YL  IA  I +   E+A LE +DCG+PL +    +   A  F ++AD  E   
Sbjct: 58  KAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCE--- 114

Query: 132 AKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            +     + P++   +Y ++ P+G VGLITPW
Sbjct: 115 -EAMDGRTYPVDTHLNYTVRVPVGPVGLITPW 145

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  102 bits (255), Expect = 4e-26
 Identities = 51/132 (38%), Positives = 68/132 (51%), Gaps = 6/132 (4%)

Query: 32  PTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK 91
           P    +V      T EDV+ AV AAR+A  +     W   SGA RA  L  +A  I  R+
Sbjct: 4   PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGP---WPRMSGAERAAVLLKVADLIRARR 60

Query: 92  SELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLK 151
             LA +ET++ GKP+ +A  +I+  A  + Y A LA  L       +   M      VL+
Sbjct: 61  ERLALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDM---LGLVLR 117

Query: 152 EPIGVVGLITPW 163
           EPIGVVG+ITPW
Sbjct: 118 EPIGVVGIITPW 129

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  101 bits (254), Expect = 7e-26
 Identities = 58/153 (37%), Positives = 78/153 (50%), Gaps = 11/153 (7%)

Query: 13  FINGEWREPVLKKRIPIVNP-TTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
           +I GEW +    +     NP   EE+VG  P +TA DV+ AV+AAR+A       +W   
Sbjct: 2   YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAF-----PEWRKV 56

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD 131
               RA+YL   A  + +RK ELA L T + GKPL E   D+ +     +Y A   EG  
Sbjct: 57  PAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAA--GEGRR 114

Query: 132 AK-QKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
              +  P  LP  N  +   ++PIGVV LITPW
Sbjct: 115 LFGETVPSELP--NKDAMTRRQPIGVVALITPW 145

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  101 bits (254), Expect = 7e-26
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 16/157 (10%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           Q  I G+W +    K  P+ NP T E++ ++P     +   A+ +A  A        WS 
Sbjct: 26  QGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAF-----PSWSK 80

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            + + R+K LR     I   K +LA L T++ GKPL+EA+ ++   A   EY+A+     
Sbjct: 81  LTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAE----- 135

Query: 131 DAKQKA----PVSLPMENFKSYVLKEPIGVVGLITPW 163
           +AK+      P   P  + +  VLK+P+GVVG ITPW
Sbjct: 136 EAKRVYGDIIPSPFP--DRRLLVLKQPVGVVGAITPW 170

Length = 498

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score =  100 bits (252), Expect = 1e-25
 Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 8/137 (5%)

Query: 28  PIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI 87
             +NP T  ++ ++ A  A DV+ AV AAR+A     G  WS  S A R   L  +A  I
Sbjct: 5   ATINPATGRVLAEVAACDAADVDRAVAAARRAF--ESG-VWSRLSPAERKAVLLRLADLI 61

Query: 88  TERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFK 146
              + ELA LET+D GKP+ +A+  D+   A  F +YA+  + +   + AP      +  
Sbjct: 62  EAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKV-YGEVAPTG---PDAL 117

Query: 147 SYVLKEPIGVVGLITPW 163
           + + +EP+GVVG + PW
Sbjct: 118 ALITREPLGVVGAVVPW 134

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score = 99.8 bits (249), Expect = 3e-25
 Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 11/136 (8%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
           ++NP T +++  +PAA+A DV+ AV AAR A       +W + +   RA+ LR +A ++ 
Sbjct: 1   VINPATGQVLARVPAASAADVDRAVAAARAAF-----PEWRATTPLERARMLRELATRLR 55

Query: 89  ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPM-ENFKS 147
           E   ELA ++ +DCG P+   + D+   A   +Y+A L   L  +     ++P+      
Sbjct: 56  EHAEELALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGE-----TIPVGGRNLH 110

Query: 148 YVLKEPIGVVGLITPW 163
           Y L+EP GVV  I  +
Sbjct: 111 YTLREPYGVVARIVAF 126

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score = 99.1 bits (247), Expect = 5e-25
 Identities = 53/136 (38%), Positives = 73/136 (53%), Gaps = 10/136 (7%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
            +NP T E++  +  A+AEDV+ AV AAR A        WS+   A R + L  +A  I 
Sbjct: 1   TLNPATGELIARVAQASAEDVDAAVAAARAAFEA-----WSAMDPAERGRILWRLAELIL 55

Query: 89  ERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS 147
               ELA LE++D GKP+  A   D+   A  F YYA  A+ +   +  PV  P   F +
Sbjct: 56  ANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKI-EGEVIPVRGP---FLN 111

Query: 148 YVLKEPIGVVGLITPW 163
           Y ++EP+GVVG I PW
Sbjct: 112 YTVREPVGVVGAIVPW 127

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score = 98.1 bits (245), Expect = 1e-24
 Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 8/138 (5%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
           ++NP TEE++G  P A A DV+ A+ AAR+A       DW S     RA+ LR +   + 
Sbjct: 1   VINPATEEVIGTAPDAGAADVDAAIAAARRAFD---TGDW-STDAEERARCLRQLHEALE 56

Query: 89  ERKSELANLETIDCGKP--LEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPV-SLPMENF 145
            RK EL  L   + G P     A+   D   G   Y+ADLA+    +   PV +L     
Sbjct: 57  ARKEELRALLVAEVGAPVMTARAMQV-DGPIGHLRYFADLADSFPWEFDLPVPALRGGPG 115

Query: 146 KSYVLKEPIGVVGLITPW 163
           +  V +EP+GVV  ITPW
Sbjct: 116 RRVVRREPVGVVAAITPW 133

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score = 98.4 bits (245), Expect = 1e-24
 Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 8/153 (5%)

Query: 12  LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
           LFINGE+ + V    + + NP+T +++  I  AT  DV++AV+ A  A   + G      
Sbjct: 9   LFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGL---KV 65

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGL 130
           SG+ R + L  +A  +      LA++E +D GK    A   D+   A  F YY   A+  
Sbjct: 66  SGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWAD-- 123

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             K    V        +Y   EPIGV G I PW
Sbjct: 124 --KIHGQVIETDIKKLTYTRHEPIGVCGQIIPW 154

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score = 97.6 bits (243), Expect = 2e-24
 Identities = 63/156 (40%), Positives = 80/156 (51%), Gaps = 12/156 (7%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           +LFINGE+ +    K     +P T E++  I     EDV+LAV AAR+A        W  
Sbjct: 22  KLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGP---WPR 78

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGK--PLEEAVWDIDDVAGCFEYYADLAE 128
            SG  R + +   A  I E   ELA L+TID GK   L +AV DI   AG   YYA  A+
Sbjct: 79  MSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAV-DIPAAAGLLRYYAGAAD 137

Query: 129 GLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
            +  +     +L M    + Y LKEPIGVVG I PW
Sbjct: 138 KIHGE-----TLKMSRQLQGYTLKEPIGVVGHIIPW 168

Length = 501

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score = 97.0 bits (242), Expect = 3e-24
 Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 9/136 (6%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
           +V+P T E +  +P A+A DV+ AV AA  A        W   + A R+K L  +A  I 
Sbjct: 1   VVDPATGEEIATVPDASAADVDAAVAAAHAAF-----PSWRRTTPAERSKALLKLADAIE 55

Query: 89  ERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS 147
           E   ELA LE+ + GKPL     D +      F ++A  A  L+          +    S
Sbjct: 56  ENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEY---LPGHTS 112

Query: 148 YVLKEPIGVVGLITPW 163
            + +EPIGVV  I PW
Sbjct: 113 MIRREPIGVVAQIAPW 128

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score = 96.9 bits (242), Expect = 3e-24
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 5/134 (3%)

Query: 30  VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89
            NP T E++G++P     +V  AV  AR A      + W++     RA+ L      + +
Sbjct: 1   RNPATGEVLGEVPVTDPAEVAAAVARARAA-----QRAWAALGVEGRAQRLLRWKRALAD 55

Query: 90  RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYV 149
              ELA L   + GKP  +A  ++       ++ A  A  + A +K P  L M N K+ V
Sbjct: 56  HADELAELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATV 115

Query: 150 LKEPIGVVGLITPW 163
              P GVVG+I+PW
Sbjct: 116 EYRPYGVVGVISPW 129

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score = 94.1 bits (235), Expect = 3e-23
 Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 8/153 (5%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           +LFINGEW E    + + + NP T E++  +P ATAE+V+ AV AA+ A        WS+
Sbjct: 2   KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAA-----FPAWSA 56

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
                R + +      + E   ELA L T++ GK L +A  D+       E+   +   L
Sbjct: 57  TPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLL 116

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             +    V+  ++   +Y  ++P+GVV  ITP+
Sbjct: 117 KGEYLENVARGID---TYSYRQPLGVVAGITPF 146

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score = 91.4 bits (227), Expect = 4e-22
 Identities = 58/152 (38%), Positives = 76/152 (50%), Gaps = 10/152 (6%)

Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           FI GEW  PV  +    + P T ++  ++P +TAED+ELA+DAA  A        W   S
Sbjct: 4   FIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA-----WGKTS 58

Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLD 131
            A RA  L  IA ++      LA  ET D GKP+ E +  DI      F Y+A    G  
Sbjct: 59  VAERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFA----GCI 114

Query: 132 AKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             Q+  +S   EN  +Y   EP+GVVG I PW
Sbjct: 115 RAQEGSISEIDENTVAYHFHEPLGVVGQIIPW 146

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score = 89.7 bits (223), Expect = 1e-21
 Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 16/142 (11%)

Query: 27  IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86
           I + NP   E++  +P+ + E+V  A++ A +A         S+     R K L  +A  
Sbjct: 1   IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDV-----MSNLPAYKRYKILMKVAEL 55

Query: 87  ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPM---- 142
           I  RK ELA L TI+ GKP++++  +++     F+  A+ A+ L  +     ++P+    
Sbjct: 56  IERRKEELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGE-----TIPVDAYE 110

Query: 143 --ENFKSYVLKEPIGVVGLITP 162
             E   ++ ++EPIGVVG ITP
Sbjct: 111 YNERRIAFTVREPIGVVGAITP 132

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score = 89.4 bits (222), Expect = 1e-21
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 8/135 (5%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
           + NP T EI+G +P    ++ E A+ AA +A        W + +   R+  LR     + 
Sbjct: 1   VYNPATGEIIGSVPDQGVDETEAAIRAAYEAFKT-----WRATTAKERSSLLRKWYNLMM 55

Query: 89  ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSY 148
           E K +LA L T++ GKPL+EA  +I   A   E++A+ A+ +          P  + +  
Sbjct: 56  ENKDDLARLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPS---PQSDKRLI 112

Query: 149 VLKEPIGVVGLITPW 163
           V+K+P+GV   ITPW
Sbjct: 113 VIKQPVGVCAAITPW 127

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 89.6 bits (222), Expect = 2e-21
 Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 9/163 (5%)

Query: 2   AMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALS 61
           A+++ I +R LFINGE+      +    V+P T+  +  I    + D++ AV AAR    
Sbjct: 13  ALSLAIENR-LFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFE 71

Query: 62  RNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCF 120
           R    DWS +S A R   L  +A  +     ELA LET+D GKP+  ++  DI   A   
Sbjct: 72  RG---DWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAI 128

Query: 121 EYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            +Y   AE +D K    V+    +  + +++EP+GV+  I PW
Sbjct: 129 RWY---AEAID-KVYGEVATTSSHELAMIVREPVGVIAAIVPW 167

Length = 494

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score = 87.2 bits (217), Expect = 9e-21
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 13/153 (8%)

Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
            I GEW      +     NP   E +  +  A+ EDVE AV AAR+A      K+W    
Sbjct: 2   VIGGEWVGS-GGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAF-----KEWRKVP 55

Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              R + +R I   + ++K  L  L +++ GK L E + ++ ++        D A GL +
Sbjct: 56  APRRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDI----CDYAVGL-S 110

Query: 133 KQKAPVSLPME--NFKSYVLKEPIGVVGLITPW 163
           +    +++P E    +      P+GVVG+IT +
Sbjct: 111 RMLYGLTIPSERPGHRLMEQWNPLGVVGVITAF 143

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score = 86.6 bits (215), Expect = 2e-20
 Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 10/136 (7%)

Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
           ++NP T +++G++P + A DV+ AV AA+ A       +W++     R K L  IA  + 
Sbjct: 1   VINPATGQVIGEVPRSRAADVDRAVAAAKAAF-----PEWAATPARERGKLLARIADALE 55

Query: 89  ERKSELANLETIDCGKPLE-EAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS 147
            R  ELA L  ++ G  L  +A  +   +A  F Y+     GL  + K        +  +
Sbjct: 56  ARSEELARLLALETGNALRTQARPEAAVLADLFRYFG----GLAGELKGETLPFGPDVLT 111

Query: 148 YVLKEPIGVVGLITPW 163
           Y ++EP+GVVG I PW
Sbjct: 112 YTVREPLGVVGAILPW 127

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score = 85.2 bits (211), Expect = 6e-20
 Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 22/163 (13%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           QLFINGE+ +    K    +NPT   ++  +  AT EDV+ AV AA++A    +  +W  
Sbjct: 7   QLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAF---ENGEWGK 63

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-----WDIDDVAGCFEYYAD 125
            +   R + +  +A  + E + ELA +E++D G     A+       I      F Y+A 
Sbjct: 64  MNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQ----TFRYFAG 119

Query: 126 LAEGLDAKQKAPVSLPMENFK-----SYVLKEPIGVVGLITPW 163
             + +  K     ++P+   +     +   +EPIGV G++ PW
Sbjct: 120 WCDKIQGK-----TIPINQARPNRNLTLTKREPIGVCGIVIPW 157

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score = 84.7 bits (210), Expect = 7e-20
 Identities = 43/136 (31%), Positives = 61/136 (44%), Gaps = 12/136 (8%)

Query: 30  VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89
           ++P T E++G        + E A+ AAR+A       DW+      RA+ L  +A     
Sbjct: 2   IDPATGEVIGTYADGGVAEAEAAIAAARRAF---DETDWAHDP-RLRARVLLELADAFEA 57

Query: 90  RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL--DAKQKAPVSLPMENFKS 147
               LA L  ++ GK L EA ++I        YYA LA        +  P S       S
Sbjct: 58  NAERLARLLALENGKILGEARFEISGAISELRYYAGLARTEAGRMIEPEPGSF------S 111

Query: 148 YVLKEPIGVVGLITPW 163
            VL+EP+GV G+I PW
Sbjct: 112 LVLREPMGVAGIIVPW 127

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score = 84.9 bits (211), Expect = 7e-20
 Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 6/138 (4%)

Query: 26  RIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA 85
              +  P T E +  +P +TA DVE A   AR A      + W++     RA  L     
Sbjct: 33  TREVTAPFTGEPLATVPVSTAADVEAAFARARAA-----QRAWAATPVRERAAVLLRFHD 87

Query: 86  KITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENF 145
            + E + EL +L  ++ GK    A  ++ DVA    YYA  A  L A ++   +LP+   
Sbjct: 88  LVLENREELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLT- 146

Query: 146 KSYVLKEPIGVVGLITPW 163
           K+  L++P GVVG+I+PW
Sbjct: 147 KTTELRQPKGVVGVISPW 164

Length = 524

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score = 84.0 bits (209), Expect = 1e-19
 Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 49  VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108
           +E A+D A  A        W   S A RA  LR +A  + ERK ELA L T++ GKP+ E
Sbjct: 1   IEAALDRAHAAF-----LAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAE 55

Query: 109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           A  +++  A    YYA+ AE       A   +  +  K+YV  EP+GVV  I PW
Sbjct: 56  ARAEVEKCAWICRYYAENAEAF----LADEPIETDAGKAYVRYEPLGVVLGIMPW 106

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score = 84.0 bits (208), Expect = 1e-19
 Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 27/162 (16%)

Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           FING + E    K    +NP    ++  +  A A +V+ AV AAR AL   KG  W   +
Sbjct: 4   FINGAFVES--GKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAAL---KG-PWGKMT 57

Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLD 131
            A RA  L A+A +I  R  +    E  D GKP   A   DI   A  F  +AD+ +   
Sbjct: 58  VAERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVK--- 114

Query: 132 AKQKAPVSLPMENFK----------SYVLKEPIGVVGLITPW 163
                  + P E F+          +Y +++P+GVVG+I+PW
Sbjct: 115 -------NAPTECFEMATPDGKGALNYAVRKPLGVVGVISPW 149

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score = 83.7 bits (207), Expect = 2e-19
 Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 10/155 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           QL ING++ +    K  P ++P T E++  +    AEDV  AV AAR+A        W  
Sbjct: 59  QLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGP---WPK 115

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEG 129
            +   R++ L   A  + +   ELA LET D GKP E++   ++   A  F YYA  A+ 
Sbjct: 116 MTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADK 175

Query: 130 LDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           +       +++P +       L EPIGV G I PW
Sbjct: 176 IHG-----LTVPADGPHHVQTLHEPIGVAGQIIPW 205

Length = 538

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score = 83.3 bits (206), Expect = 2e-19
 Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 9/156 (5%)

Query: 12  LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
            FI+G       +KR+ I NP TE+++  + +AT  DV+ AV +A +A        W+  
Sbjct: 2   HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV----SAWAKT 57

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE-EAVWDIDDVAGCFEYYADLAEGL 130
           + A R + L  +A  I +   ELA LET+  GK +     +++   A    Y+A  A  +
Sbjct: 58  TPAERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKI 117

Query: 131 DAKQKAPVSLPM---ENFKSYVLKEPIGVVGLITPW 163
           + +  AP S+P    E + ++  +EP+GVV  I PW
Sbjct: 118 NGETLAP-SIPSMQGERYTAFTRREPVGVVAGIVPW 152

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score = 83.4 bits (207), Expect = 2e-19
 Identities = 48/153 (31%), Positives = 65/153 (42%), Gaps = 11/153 (7%)

Query: 12  LFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           L I GE      + +I  +NP    E+VG +  AT E  E A+ AA +A      + W  
Sbjct: 39  LIIGGERIT--TEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAF-----ETWKK 91

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            S   RA+ L   AA I  RK E +     + GKP  EA  D  +     EYYA   + L
Sbjct: 92  WSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYA--RQML 149

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                 PV        +     P+GV  +I+PW
Sbjct: 150 KLADGKPV-ESRPGEHNRYFYIPLGVGVVISPW 181

Length = 514

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score = 81.5 bits (201), Expect = 1e-18
 Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)

Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
           +Q  INGEW +    + I + NP   + +G +P   A++   A+DAA +AL       W 
Sbjct: 11  QQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA-----WR 65

Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129
           + +   RA  LR     + E + +LA L T++ GKPL EA  +I   A   E++A+    
Sbjct: 66  ALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE---- 121

Query: 130 LDAKQKAPVSLP--MENFKSYVLKEPIGVVGLITPW 163
            + K+    ++P    + +  V+K+PIGV   ITPW
Sbjct: 122 -EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPW 156

Length = 482

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score = 78.7 bits (194), Expect = 1e-17
 Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 21/162 (12%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           +L I+G+          P VNP TEE++G    ATA D++ A+ AAR+A       DWS 
Sbjct: 2   RLLIDGK-LVAGSAGTFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDET---DWSR 57

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKP--------LEEAVWDIDDVAGCFEY 122
            + A R + LR +   +     EL  L   + G P        LE  V D+        +
Sbjct: 58  DT-ALRVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDL-------GF 109

Query: 123 YADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
            ADLAE         V+ PM    +  + +E +GVVG ITPW
Sbjct: 110 AADLAESYAWTTDLGVASPMGIPTRRTLRREAVGVVGAITPW 151

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 78.4 bits (194), Expect = 1e-17
 Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 18/143 (12%)

Query: 27  IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAF-RAKYLRAIAA 85
           I +++P   E++G +P A+ EDVE A+ AA++     K      +  A+ RA+ L   A 
Sbjct: 1   IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMK------SLPAYERAEILERAAQ 54

Query: 86  KITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPM--- 142
            + ER+ E A    ++ GKP+++A     +V    E     AE  +AK+ A  ++P    
Sbjct: 55  LLEERREEFARTIALEAGKPIKDA---RKEVDRAIETLRLSAE--EAKRLAGETIPFDAS 109

Query: 143 ---ENFKSYVLKEPIGVVGLITP 162
              E    + ++EPIGVV  ITP
Sbjct: 110 PGGEGRIGFTIREPIGVVAAITP 132

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score = 77.3 bits (190), Expect = 3e-17
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           +L INGE       ++ P+ NP T E++ +I  A+AE V+ AV AA  A +     +W  
Sbjct: 3   KLLINGELVSGE-GEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA-----EWGQ 56

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEG 129
            +   RA+ L  +A  I E     A LE+ +CGKPL     D I  +   F ++A  A  
Sbjct: 57  TTPKARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARC 116

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           L           +E   S + ++P+GVV  I PW
Sbjct: 117 LSGLAAGEY---LEGHTSMIRRDPLGVVASIAPW 147

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score = 75.7 bits (187), Expect = 9e-17
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 8/134 (5%)

Query: 30  VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89
           ++P    ++ + P A+ E V  A++ AR A      K W +     R   +      +  
Sbjct: 1   ISPIDGSVIAERPLASLEAVRAALERARAA-----QKGWRAVPLEERKAIVTRAVELLAA 55

Query: 90  RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYV 149
              E+A   T   G+P+ +A  +I  +     Y   +AE   A  + P     + F+ Y+
Sbjct: 56  NTDEIAEELTWQMGRPIAQAGGEIRGMLERARYMISIAEEALADIRVP---EKDGFERYI 112

Query: 150 LKEPIGVVGLITPW 163
            +EP+GVV +I PW
Sbjct: 113 RREPLGVVLIIAPW 126

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 73.5 bits (181), Expect = 8e-16
 Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 12  LFINGEWRE---PVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDW 68
           L+ING+W        + R    NP + E++     ATA  V+ AV AAR A        W
Sbjct: 3   LWINGDWIAGQGEAFESR----NPVSGEVLWQGNDATAAQVDAAVRAARAAFP-----AW 53

Query: 69  SSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAG 118
           +  S   R   +   AA + E K ELA +   + GKPL EA  ++  +  
Sbjct: 54  ARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMIN 103

Length = 487

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score = 72.9 bits (179), Expect = 1e-15
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 18/144 (12%)

Query: 27  IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAF-RAKYLRAIAA 85
           + + NP   E++G +PA    D E A+  AR       G +   A     R   L   A 
Sbjct: 1   LDVHNPYDGEVIGKVPADDRADAEEALATAR------AGAENRRALPPHERMAILERAAD 54

Query: 86  KITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPM--- 142
            + +R  E A +   + GKP+++A  ++D         A+     +A++     +P+   
Sbjct: 55  LLKKRAEEFAKIIACEGGKPIKDARVEVDRAIDTLRLAAE-----EAERIRGEEIPLDAT 109

Query: 143 ---ENFKSYVLKEPIGVVGLITPW 163
              +N  ++ ++EP+GVV  ITP+
Sbjct: 110 QGSDNRLAWTIREPVGVVLAITPF 133

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score = 71.8 bits (177), Expect = 2e-15
 Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 18/158 (11%)

Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA- 71
            INGEW+E    K I + +P   E++G +PA +A ++  A + A      + G+ W    
Sbjct: 5   LINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAY-----DAGRGWWPTM 58

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD 131
               R   L   A  + E K E+ANL   + GK L++A+ ++D      +Y  D  E  +
Sbjct: 59  PLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTI---DYIRDTIE--E 113

Query: 132 AKQKAPVSLPMENFK------SYVLKEPIGVVGLITPW 163
            K+    SLP + F       + V +EP+GVV  I P+
Sbjct: 114 LKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPF 151

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score = 71.4 bits (175), Expect = 3e-15
 Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 11/153 (7%)

Query: 12  LFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           L INGE  E   + +I  +NP    E+VG +  A+ E  E A+ AA +A      + W  
Sbjct: 35  LVINGERVET--ENKIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAF-----EAWKK 87

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
                RA  L   AA +  R+ E + L   + GKP  EA  ++ +     EYYA     L
Sbjct: 88  TDPEERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEADAEVAEAIDFMEYYARQMIEL 147

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            AK K   S   E   +  +  P GV  +I+PW
Sbjct: 148 -AKGKPVNSREGE--TNQYVYTPTGVTVVISPW 177

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 71.1 bits (175), Expect = 5e-15
 Identities = 45/155 (29%), Positives = 65/155 (41%), Gaps = 17/155 (10%)

Query: 13  FINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
            INGE  E    +  P+++P   E  +G++  A AEDV+ A+  A  A +      WS+ 
Sbjct: 36  IINGEETET--GEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAG-----WSAT 88

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDV--AGCF-EYYADLAE 128
               RA+ L   A  +   + EL  L   + GK L +A     +V  A  F  YYA  A 
Sbjct: 89  PVEERAEILEKAADLLEANRGELIALAAAEAGKTLADA---DAEVREAIDFCRYYAAQAR 145

Query: 129 GLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            L +  + P      N          GV   I+PW
Sbjct: 146 ELFSDPELPGPTGELNGLEL---HGRGVFVCISPW 177

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score = 70.4 bits (173), Expect = 6e-15
 Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 6/132 (4%)

Query: 32  PTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK 91
           P T E +G++P +T  DVE A   AR A      + W++   A RA         + ER+
Sbjct: 3   PFTGEPLGELPQSTPADVEAAFARARAA-----QRAWAARPFAERAAVFLRFHDLVLERR 57

Query: 92  SELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLK 151
            EL +L  ++ GK    A  ++ DVA    YYA  AE L   ++   ++P+   ++ V +
Sbjct: 58  DELLDLIQLETGKARRHAFEEVLDVAIVARYYARRAERLLKPRRRRGAIPVLT-RTTVNR 116

Query: 152 EPIGVVGLITPW 163
            P GVVG+I+PW
Sbjct: 117 RPKGVVGVISPW 128

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score = 68.4 bits (168), Expect = 4e-14
 Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 18/144 (12%)

Query: 27  IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAF-RAKYLRAIAA 85
           + + NP T E+V  +  A  +D+E A+ AA +A    +      A  A  RA  L    A
Sbjct: 1   LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMR------ALPAHRRAAILLHCVA 54

Query: 86  KITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPM--- 142
           ++ ER  ELA    ++ GKP+++A  ++      F   A+ A  +  +      LP+   
Sbjct: 55  RLEERFEELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEV-----LPLDIS 109

Query: 143 ---ENFKSYVLKEPIGVVGLITPW 163
              E  +  V + PIG V  ITP+
Sbjct: 110 ARGEGRQGLVRRFPIGPVSAITPF 133

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score = 67.2 bits (164), Expect = 9e-14
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
             +I G++ E      IP+ NP T E+   +  A+ ++V+ AV +AR+         W  
Sbjct: 2   NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL-----TWGQ 56

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            S A R   L    A + E + E+A L T + GK   +A   + DVA   E   + A G+
Sbjct: 57  TSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDA---LGDVARGLE-VVEHACGV 112

Query: 131 DAKQKAPVSLPM-ENFKSYVLKEPIGVVGLITPW 163
           ++  K   S  +      Y +++P+GV   ITP+
Sbjct: 113 NSLLKGETSTQVATRVDVYSIRQPLGVCAGITPF 146

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score = 66.8 bits (163), Expect = 1e-13
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 30  VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89
           VNP T E +  +P A A+D+E A+  A         +DW   +  +RA+ LR I   +  
Sbjct: 12  VNPATGEQLSVLPWAGADDIENALQLAAAGF-----RDWRETNIDYRAQKLRDIGKALRA 66

Query: 90  RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYV 149
           R  E+A + T + GKP+ +A  ++   A   ++YA+    +   +   V    EN ++ +
Sbjct: 67  RSEEMAQMITREMGKPINQARAEVAKSANLCDWYAEHGPAMLKAEPTLV----ENQQAVI 122

Query: 150 LKEPIGVVGLITPW 163
              P+G +  I PW
Sbjct: 123 EYRPLGTILAIMPW 136

Length = 462

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score = 66.6 bits (163), Expect = 2e-13
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 16  GEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAF 75
           GEWR+   ++ I ++NP T E + +IPAA+ EDV+ A  AA  A      K+W++     
Sbjct: 1   GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAA-----QKEWAATLPQE 55

Query: 76  RAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQK 135
           RA+ L   A  + ER+ E+      + G    +A  +           A     ++ +  
Sbjct: 56  RAEILEKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRIL 115

Query: 136 APVSLPMENFKSYVLKEPIGVVGLITPW 163
                 +   ++ V +EP+GVVG+I+PW
Sbjct: 116 PS---DVPGKENRVYREPLGVVGVISPW 140

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 63.6 bits (155), Expect = 2e-12
 Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 12/101 (11%)

Query: 12  LFINGEWRE---PVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDW 68
           LFI+G+WR              NP T+E++    AA+A  VE AV AAR A        W
Sbjct: 1   LFIDGKWRAGQGESFSST----NPATQEVLWQGAAASAAQVEAAVAAARAAFPA-----W 51

Query: 69  SSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA 109
           +  S   R   ++  AA + ERK  LA +   + GKPL E 
Sbjct: 52  ARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLWET 92

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 12/135 (8%)

Query: 31  NPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90
           NP    +   +   + +D E A+ AA  A        W++ + + R + L   A  +  R
Sbjct: 5   NPADGSVYARVAVGSRQDAERAIAAAYDAF-----PAWAATTPSERERILLKAAEIMERR 59

Query: 91  KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLP--MENFKSY 148
             +L +L   + G    +A ++           A     +  +     +LP       S 
Sbjct: 60  ADDLIDLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGE-----TLPSDSPGTVSM 114

Query: 149 VLKEPIGVVGLITPW 163
            ++ P+GVV  ITP+
Sbjct: 115 SVRRPLGVVAGITPF 129

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 61.8 bits (151), Expect = 8e-12
 Identities = 47/145 (32%), Positives = 61/145 (42%), Gaps = 22/145 (15%)

Query: 27  IPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA 85
            P+V+P     +VG++  A AE VE A+ AAR A        WS      RA  L   A 
Sbjct: 564 RPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPA-----WSRTPVEERAAILERAAD 618

Query: 86  KITERKSELANLETIDCGKPLEEAVWDIDDV--AGCF-EYYADLAEGLDAKQKAPVSLP- 141
            +   ++EL  L   + GK L++A   I +V  A  F  YYA  A  L     AP  LP 
Sbjct: 619 LLEANRAELIALCVREAGKTLQDA---IAEVREAVDFCRYYAAQARRLFG---APEKLPG 672

Query: 142 ---MENFKSYVLKEPIGVVGLITPW 163
                N          GV   I+PW
Sbjct: 673 PTGESNELRL---HGRGVFVCISPW 694

Length = 1038

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score = 61.3 bits (149), Expect = 1e-11
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 6/137 (4%)

Query: 27  IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86
           I  +NP T E V    A T ++V+ A+  A         +D+ + + A RA++  A A  
Sbjct: 3   IATINPATGETVKTFTALTDDEVDAAIARAHARF-----RDYRTTTFAQRARWANAAADL 57

Query: 87  ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFK 146
           +     ++A L T++ GK L  A  +    A  F YYA+ AE L A + A  +  +   +
Sbjct: 58  LEAEADQVAALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEALLADEPADAA-AVGASR 116

Query: 147 SYVLKEPIGVVGLITPW 163
           +YV  +P+GVV  + PW
Sbjct: 117 AYVRYQPLGVVLAVMPW 133

Length = 457

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score = 59.5 bits (145), Expect = 4e-11
 Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 22/153 (14%)

Query: 15  NGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGA 74
           +GEW        +  ++P   E +  +  AT ED E  + AA++A      K+W      
Sbjct: 4   DGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAF-----KEWRDVPAP 56

Query: 75  FRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDID---DVAGCFEYYADLAEGLD 131
            R + +R I   + ++K  L  L +++ GK L E + ++    D+        D A GL 
Sbjct: 57  KRGEIVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQEMIDI-------CDFAVGL- 108

Query: 132 AKQKAPVSLPMENFKSYVLKE---PIGVVGLIT 161
           ++Q   +++P E    + + E   P+GVVG+IT
Sbjct: 109 SRQLYGLTIPSER-PGHRMMEQWNPLGVVGVIT 140

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 59.9 bits (146), Expect = 4e-11
 Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 27/148 (18%)

Query: 20  EPVLKKRIPIVNP-TTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAK 78
             V     P++NP   +++VG +  A+AEDVE A+ AA+ A       +WS+   A RA 
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP-----EWSATPAAERAA 616

Query: 79  YLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDV--AGCF-EYYADLAEGLDAKQK 135
            L   A  +     EL  L   + GK L  A   I +V  A  F  YYA  A  L     
Sbjct: 617 ILERAADLMEAHMPELFALAVREAGKTLANA---IAEVREAVDFLRYYAAQARRLLNGPG 673

Query: 136 APVSLPMENFKSYVLKEPIGVVGLITPW 163
                           +P+G V  I+PW
Sbjct: 674 H---------------KPLGPVVCISPW 686

Length = 1208

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score = 59.2 bits (144), Expect = 5e-11
 Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 30  VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89
            +P T + +G +PA T EDV+ A+ AAR A      ++W+  S A R K LR++   I E
Sbjct: 1   YDPATGQHLGSVPADTPEDVDEAIAAARAA-----QREWAKTSFAERRKVLRSLLKYILE 55

Query: 90  RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSY 148
            + E+  +   D GK + +A   +I        +     E     +  P  L M   ++ 
Sbjct: 56  NQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRAR 115

Query: 149 VLKEPIGVVGLITPW 163
           V  EP+GVVG I  W
Sbjct: 116 VEYEPLGVVGAIVSW 130

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 58.2 bits (141), Expect = 1e-10
 Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)

Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           + +GEWR     K + I NP+T +    + A T E+V  A+++A+ A      K W+   
Sbjct: 19  YADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAA-----QKAWAKTP 73

Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYAD-----LA 127
              RA+ L   AA + E K+ +A     +  KP ++AV ++        Y A+     L 
Sbjct: 74  LWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILG 133

Query: 128 EGLDAKQKAPVSLPMENFKSYVL--KEPIGVVGLITPW 163
           EG   K     S P      Y L  K P+GVV  I P+
Sbjct: 134 EG---KFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPF 168

Length = 496

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score = 57.6 bits (139), Expect = 2e-10
 Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 10/153 (6%)

Query: 12  LFINGEWREPVLKKRIPIVNP-TTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           L I GEW +   K+R+  V+P    E+VG    A   + E A++AA  A      K W  
Sbjct: 21  LVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAF-----KTWKD 73

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
                RA+ L   A  +  R+ EL    T + GK   EA+ D+ +      YYA  A  L
Sbjct: 74  WPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRL 133

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                  V  P E+ +S+     +G   +I+PW
Sbjct: 134 RYPAVEVVPYPGEDNESFY--VGLGAGVVISPW 164

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score = 57.0 bits (138), Expect = 3e-10
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 15/140 (10%)

Query: 27  IPIVNPTTEEIVGDIPAATAEDVELAVDAA---RQALSRNKGKDWSSASGAFRAKYLRAI 83
           + + NP T E+VG +PA T E +  A+  A   R  L+R +           R+  L   
Sbjct: 1   LEVRNPYTGEVVGTVPAGTEEALREALALAASYRSTLTRYQ-----------RSAILNKA 49

Query: 84  AAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQ-KAPVSLPM 142
           AA +  R+ E A L T++ G  L++  +++   A    + A  A   D +     ++   
Sbjct: 50  AALLEARREEFARLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANG 109

Query: 143 ENFKSYVLKEPIGVVGLITP 162
           +  K + L+EP+GVV  ITP
Sbjct: 110 KARKIFTLREPLGVVLAITP 129

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 53.4 bits (129), Expect = 5e-09
 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 9/115 (7%)

Query: 48  DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE 107
            V+ AV AAR A        W++ S   RA  LR  A  +   K ELA L + + GKPL 
Sbjct: 1   QVDAAVAAARAAFP-----GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLW 55

Query: 108 EAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITP 162
           EA  ++  +AG      D++     ++    + PM   ++ +   P GV+ +  P
Sbjct: 56  EAQTEVAAMAG----KIDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGP 106

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score = 53.5 bits (129), Expect = 6e-09
 Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 13/130 (10%)

Query: 36  EIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELA 95
            ++G++  A A DV+ A   A  A      + W++     RA  LR  A  + E   E+A
Sbjct: 2   AVLGEVGVADAADVDRAAARAAAA-----QRAWAATPPRERAAVLRRAADLLEEHADEIA 56

Query: 96  NLETIDCGKPLEEAVWDIDDVAG-CFEYYADLAEGLDAKQKAPVSLPMENFK-SYVLKEP 153
           +    + G    +A +++    G   E     A GL   Q     LP    + S   + P
Sbjct: 57  DWIVRESGSIRPKAGFEVGAAIGELHE-----AAGL-PTQPQGEILPSAPGRLSLARRVP 110

Query: 154 IGVVGLITPW 163
           +GVVG+I+P+
Sbjct: 111 LGVVGVISPF 120

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score = 52.9 bits (127), Expect = 8e-09
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 16/144 (11%)

Query: 25  KRIPIVNPTTEEIVGDIPAATAEDVELAVDAA---RQALSRNKGKDWSSASGAFRAKYLR 81
           + I +  P    +VG +P A+ +DV  A   A   R  L+R +           R+  L 
Sbjct: 17  RVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRPTLTRYE-----------RSAILD 65

Query: 82  AIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLP 141
             AA +  RK E+++L T++ G   +++++++  VA    + A  A   D +  +    P
Sbjct: 66  RAAALLAARKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTP 125

Query: 142 M-ENFKSYVLKEPI-GVVGLITPW 163
             +  K +  +EP+ GV+  ITP+
Sbjct: 126 HGKARKVFTQREPLLGVISAITPF 149

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 18/121 (14%)

Query: 48  DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE 107
           DV+ A  AA  A      K W++     RA  LR  A  + ER+ E+A+    + G    
Sbjct: 1   DVDRAYAAAAAAQ-----KAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRP 55

Query: 108 EAVWDIDDVAGCFEYYADLA---EGLDAKQKAPVSLP--MENFKSYVLKEPIGVVGLITP 162
           +A +++          A L    EG          LP  +   +S V + P+GVVG+I+P
Sbjct: 56  KAAFEVGAAIAILREAAGLPRRPEGEI--------LPSDVPGKESMVRRVPLGVVGVISP 107

Query: 163 W 163
           +
Sbjct: 108 F 108

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 50.5 bits (121), Expect = 8e-08
 Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 21/137 (15%)

Query: 28  PIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86
           P++NP   ++IVG +  AT  DVE A++AA  A        WS+   A RA  L   A  
Sbjct: 130 PVINPADPDDIVGTVTEATEADVEQALEAAVAA-----APIWSATPPAERAAILERAADL 184

Query: 87  ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFK 146
           +  +  +L  L   + GK L  A+ ++ +      YYA  A                   
Sbjct: 185 MEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGNLTHR--------- 235

Query: 147 SYVLKEPIGVVGLITPW 163
                 P+G V  I+PW
Sbjct: 236 ------PLGPVVCISPW 246

Length = 769

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score = 48.3 bits (116), Expect = 4e-07
 Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 12/118 (10%)

Query: 48  DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE 107
           D + AV+AA  A        WS    + R   L   A  +  R+ E       + G    
Sbjct: 1   DADQAVEAAAAAF-----PAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAA 55

Query: 108 EAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPM--ENFKSYVLKEPIGVVGLITPW 163
            A +++D  AG     A L       Q    S+P       + V+KEP+GVV  I PW
Sbjct: 56  WAGFNVDLAAGMLREAASLIT-----QIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPW 108

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 47.8 bits (113), Expect = 6e-07
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 8/151 (5%)

Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
            I G + E      I ++NP T+E+V  +P  T E+ + AV AA+QA        W +  
Sbjct: 117 LIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPL-----WRNTP 171

Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              R + +      I +   +LA   T + GK L+++  DI       E+   +A     
Sbjct: 172 ITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMG 231

Query: 133 KQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           +    VS       +Y ++EP+GV   I P+
Sbjct: 232 EYLPNVS---NGVDTYSIREPLGVCAGICPF 259

Length = 604

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score = 47.0 bits (112), Expect = 8e-07
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 9/87 (10%)

Query: 80  LRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA---EGLDAKQKA 136
           LR IAA I ER SE++ L   + GK  + A  ++   A   +Y A+ A   EG    +  
Sbjct: 1   LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEG----EII 56

Query: 137 PVSLPMENFKSYVLKEPIGVVGLITPW 163
               P EN    + K  +GV   I PW
Sbjct: 57  QSDRPGENI--LLFKRALGVTTGILPW 81

Length = 409

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)

Query: 74  AFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDA 132
            +R   L+A+   +TE + E+A     D GKP  EA + +I  V G  ++     +    
Sbjct: 20  EWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK 79

Query: 133 KQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            ++  V L ++  K+YV+ EP+GVV +I PW
Sbjct: 80  PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPW 110

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 45.3 bits (107), Expect = 4e-06
 Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 21/137 (15%)

Query: 28  PIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86
           P+ NP    +IVG +  A    V+ A+D+A+QA        W++     RA  L  +A  
Sbjct: 54  PVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP-----TWNATPAKERAAKLDRLADL 108

Query: 87  ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFK 146
           +     EL  L   + GK +  A+ ++ +      YYA               L   +  
Sbjct: 109 LELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRD---------VLGEFS-- 157

Query: 147 SYVLKEPIGVVGLITPW 163
                E  GV   I+PW
Sbjct: 158 ----VESRGVFVCISPW 170

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 23/145 (15%)

Query: 27  IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86
           + +VNP   + +G++P      ++ A+D A   L  ++  +W  A    R   L  +A  
Sbjct: 1   LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHA-LFLDRN-NWLPAHE--RIAILERLADL 56

Query: 87  ITERKSELANLETIDCGKPLEEAVWD----IDDVAGCFEYYADLAEGLDAKQKAPVSLPM 142
           + ER  ELA L   + GKPL +A  +    ID V    +    L             +PM
Sbjct: 57  MEERADELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGG---------REIPM 107

Query: 143 ------ENFKSYVLKEPIGVVGLIT 161
                     ++  +EPIGVV  I+
Sbjct: 108 GLTPASAGRIAFTTREPIGVVVAIS 132

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score = 43.3 bits (102), Expect = 2e-05
 Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 18/153 (11%)

Query: 13  FINGEWRE--PVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           ++ GEWR   P++      VNP   + + ++  A+ ED E  + A  +A      K W  
Sbjct: 24  YVGGEWRANGPLVSS----VNPANNQPIAEVVEASLEDYEEGLRACEEA-----AKIWMQ 74

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
                R + +R I   +  +   L  L +++ GK L E + ++ ++        D A GL
Sbjct: 75  VPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIID----MCDFAVGL 130

Query: 131 DAKQKAPVSLPMENFKSYVLK--EPIGVVGLIT 161
            ++Q     +P E     +++   P+G+VG+IT
Sbjct: 131 -SRQLNGSIIPSERPNHMMMEVWNPLGIVGVIT 162

Length = 508

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 21/137 (15%)

Query: 28  PIVNP-TTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86
           P++NP    +IVG +  AT  +VE A+++A  A        W +   A RA  L   A  
Sbjct: 662 PVINPADPRDIVGYVREATPAEVEQALESAVNA-----APIWFATPPAERAAILERAADL 716

Query: 87  ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFK 146
           +  +   L  L   + GK    A+ ++ +      YYA                   +F 
Sbjct: 717 MEAQMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRD--------------DF- 761

Query: 147 SYVLKEPIGVVGLITPW 163
                 P+G V  I+PW
Sbjct: 762 DNDTHRPLGPVVCISPW 778

Length = 1318

>gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase

 Score = 38.7 bits (91), Expect = 6e-04
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 8/54 (14%)

Query: 49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSEL---ANLET 99
          V+ A  AA  A      + + + S A RA +L AIA +I     EL   A+ ET
Sbjct: 1  VDAAAAAAAAAF-----ESYRALSPARRAAFLEAIADEIEALGDELVARAHAET 49

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 9/125 (7%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           Q ++ G+W          + +  T E+V     A      L   AA        G    +
Sbjct: 2   QSYVAGQWHAGT-GDGRTLHDAVTGEVV-----ARVSSEGLDFAAAVAYAREKGGPALRA 55

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA--E 128
            +   RA  L+A+A  + ERK +L  L +   G    ++  DID   G    YA L   E
Sbjct: 56  LTFHERAAMLKALAKYLMERKEDLYAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRE 114

Query: 129 GLDAK 133
             +A 
Sbjct: 115 LPNAH 119

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 24/131 (18%)

Query: 43  AATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDC 102
               E +   V   +++    K +        FR + LR +   + E K E +     D 
Sbjct: 3   PDNPEIIPPIVKKLKESFLTGKTRPL-----EFRKQQLRNLLRMLEENKQEFSEAVHKDL 57

Query: 103 GKPLEEA--------VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENF--KSYVLKE 152
           G+   E         V +I+ +    + Y          +   V         KSY++ E
Sbjct: 58  GRHPFETKMTEVLLTVAEIEHLLKHLDEYL---------KPEKVDTVGVFGPGKSYIIPE 108

Query: 153 PIGVVGLITPW 163
           P+GVV +I  W
Sbjct: 109 PLGVVLVIGAW 119

Length = 493

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 11/123 (8%)

Query: 45  TAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGK 104
             ++++      R      K KD       +R   L+ +   + + +  +      D G+
Sbjct: 3   PLDEIDSIHSRLRATFRSGKTKDL-----EYRLWQLKQLYWAVKDNEEAIVEALKKDLGR 57

Query: 105 PLEEAVWDIDDVAGCFEYYADLAEGLD--AKQKAP--VSLPMENFKSYVLKEPIGVVGLI 160
           P  E +  + +V+G       + + L   AK +      L     K  + KEP+GVV +I
Sbjct: 58  PPFETL--LTEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLII 115

Query: 161 TPW 163
            PW
Sbjct: 116 GPW 118

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	163
KOG2451	503	consensus Aldehyde dehydrogenase [Energy productio	99.97
PLN02467	503	betaine aldehyde dehydrogenase	99.97
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	99.97
KOG2450	501	consensus Aldehyde dehydrogenase [Energy productio	99.97
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	99.96
PLN02315	508	aldehyde dehydrogenase family 7 member	99.96
PLN02278	498	succinic semialdehyde dehydrogenase	99.96
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	99.96
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	99.96
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	99.96
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	99.96
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	99.96
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	99.96
PLN02466	538	aldehyde dehydrogenase family 2 member	99.96
PLN02766	501	coniferyl-aldehyde dehydrogenase	99.96
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	99.96
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	99.96
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	99.95
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	99.95
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	99.95
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	99.95
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	99.95
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	99.95
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	99.95
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	99.95
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	99.95
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	99.95
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	99.95
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	99.95
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	99.95
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	99.95
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	99.95
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	99.95
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	99.95
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	99.95
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	99.95
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	99.95
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	99.95
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	99.95
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	99.95
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	99.95
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	99.95
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	99.94
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	99.94
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	99.94
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	99.94
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	99.94
PRK11903	521	aldehyde dehydrogenase; Provisional	99.94
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	99.94
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	99.94
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	99.94
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	99.94
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	99.94
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	99.94
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	99.93
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	99.93
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	99.93
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	99.93
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	99.93
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	99.93
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	99.92
KOG2452	881	consensus Formyltetrahydrofolate dehydrogenase [Nu	99.92
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	99.92
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	99.92
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	99.92
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	99.91
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	99.91
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	99.91
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	99.91
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	99.91
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	99.91
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	99.91
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	99.91
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	99.91
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	99.91
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	99.91
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	99.91
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	99.9
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	99.9
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	99.9
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	99.9
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	99.9
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	99.89
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	99.89
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	99.89
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	99.89
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	99.89
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	99.89
PRK11809	1318	putA trifunctional transcriptional regulator/proli	99.88
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	99.88
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	99.88
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	99.87
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	99.86
PLN02174	484	aldehyde dehydrogenase family 3 member H1	99.86
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	99.85
PLN02203	484	aldehyde dehydrogenase	99.84
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	99.84
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	99.83
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	99.83
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	99.83
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	99.82
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	99.8
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	99.8
KOG2454	583	consensus Betaine aldehyde dehydrogenase [Energy p	99.8
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	99.8
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	99.79
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	99.78
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	99.78
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	99.77
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	99.76
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	99.75
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	99.72
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	99.72
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	99.72
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	99.72
KOG2455	561	consensus Delta-1-pyrroline-5-carboxylate dehydrog	99.71
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	99.69
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	99.69
KOG2453	507	consensus Aldehyde dehydrogenase [Energy productio	99.68
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	99.67
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	99.67
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	99.67
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	99.66
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	99.65
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	99.63
KOG2456	477	consensus Aldehyde dehydrogenase [Energy productio	99.63
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	99.61
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	99.59
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	99.58
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	99.52
PRK10090	409	aldehyde dehydrogenase A; Provisional	99.48
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	98.05
KOG4165	433	consensus Gamma-glutamyl phosphate reductase [Amin	97.48
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	97.44

>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=99.97  E-value=3.9e-31  Score=208.57  Aligned_cols=146  Identities=35%  Similarity=0.557  Sum_probs=138.8

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .+.||+|+|+++.++.+|+|.||++|+.++.++..+.++.+.|+++|.+||.     .|+.++..+|.++|++..++|.+
T Consensus        24 ~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~-----s~~~~takeRs~lLrkwy~Li~e   98 (503)
T KOG2451|consen   24 AQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK-----SYRNLTAKERSALLRKWYELIME   98 (503)
T ss_pred             hhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHh
Confidence            3679999999998889999999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+|+|+.++++|.|||+.+|.+||..+..+++||+..+++..++.   .+...++...++.++|+|||++|+||
T Consensus        99 n~ddLa~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdi---i~s~~~~rr~i~ikQPvGV~alItPW  169 (503)
T KOG2451|consen   99 NKDDLATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDI---IPSLNPNRRLIVIKQPVGVVALITPW  169 (503)
T ss_pred             chHHHHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccc---cCCCCCCceEEEEeccceeEEEecCc
Confidence            999999999999999999999999999999999999999999985   44444677889999999999999999

>PLN02467 betaine aldehyde dehydrogenase

Probab=99.97  E-value=9.7e-30  Score=213.37  Aligned_cols=161  Identities=83%  Similarity=1.347  Sum_probs=139.5

Q ss_pred             cccCCCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 031230            3 MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRA   82 (163)
Q Consensus         3 ~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~   82 (163)
                      +++|.+.+++||+|+|+.+.++.+++++||+||+++++++.++.+|+++|++.|++||.++++..|+.++..+|.++|.+
T Consensus         1 ~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~   80 (503)
T PLN02467          1 MAIPVPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRA   80 (503)
T ss_pred             CCCccCccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHH
Confidence            45778888999999999876678899999999999999999999999999999999992221118999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEcc
Q 031230           83 IAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITP  162 (163)
Q Consensus        83 ~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsP  162 (163)
                      ++++|++++++|+.++++|+|||..++..||..+++.++||+.++.++.+....+...+..+...++.|+|+|||++|+|
T Consensus        81 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P  160 (503)
T PLN02467         81 IAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITP  160 (503)
T ss_pred             HHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECC
Confidence            99999999999999999999999999999999999999999999988876531111112124467899999999999999


Q ss_pred             C
Q 031230          163 W  163 (163)
Q Consensus       163 w  163 (163)
                      |
T Consensus       161 w  161 (503)
T PLN02467        161 W  161 (503)
T ss_pred             C
Confidence            9

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=99.97  E-value=1.6e-29  Score=214.51  Aligned_cols=147  Identities=26%  Similarity=0.352  Sum_probs=133.5

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      .+++||||+|+.+.++..++++||+||+++++++.++.+|++.|++.|++||+     .|+.++..+|+++|.+++++|+
T Consensus       113 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~-----~W~~~~~~eR~~iL~k~a~~L~  187 (604)
T PLN02419        113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP-----LWRNTPITTRQRVMLKFQELIR  187 (604)
T ss_pred             ccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHH
Confidence            46889999999876667899999999999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||+.++..||..+++.++||++++..+.+..   .+....+...++.|+|+|||++|+||
T Consensus       188 ~~~~ela~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~---~~~~~~~~~~~~~reP~GVV~~I~Pw  259 (604)
T PLN02419        188 KNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEY---LPNVSNGVDTYSIREPLGVCAGICPF  259 (604)
T ss_pred             HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCc---ccccCCCccceEEecCccEEEEECCC
Confidence            9999999999999999999999999999999999999998887653   12111344578999999999999999

>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=99.97  E-value=4.4e-30  Score=209.03  Aligned_cols=146  Identities=42%  Similarity=0.711  Sum_probs=136.3

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      .+||||+|+++.++++|+++||.||+++++++.++.+||+.|+++|++||+.+   .|++++..+|..+|.+++++++++
T Consensus        22 ~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~---~W~~~~~~~R~~~L~~~Adlie~~   98 (501)
T KOG2450|consen   22 GLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLV---DWAKRDAAERGRLLRKLADLIEQD   98 (501)
T ss_pred             heeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcC---ccccCCHHHHHHHHHHHHHHHHhh
Confidence            78999999999899999999999999999999999999999999999999943   699999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+.+.+.+.|||+.++. .||..+++++|||+.+++++.+..   .+. ..++..|++++|+|||+.|+||
T Consensus        99 ~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~---~~~-~~~~~~yt~~eP~GV~G~I~pW  168 (501)
T KOG2450|consen   99 ADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGST---IPT-DGEFFAYTRREPIGVCGQIIPW  168 (501)
T ss_pred             hHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhccccc---CCC-CCceEEEecCCcceeeeEeccC
Confidence            99999999999999999998 799999999999999999986652   222 2567899999999999999999

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=99.96  E-value=1.3e-28  Score=205.61  Aligned_cols=150  Identities=32%  Similarity=0.543  Sum_probs=133.6

Q ss_pred             CCCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 031230            6 PIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA   85 (163)
Q Consensus         6 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~   85 (163)
                      ++...++||+|+|+.+.++.+++++||+||+++++++.++.+|+++|+++|+++|+     .|+.+|..+|.++|.++++
T Consensus         7 ~~~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~-----~W~~~~~~~R~~~L~~~a~   81 (482)
T PRK11241          7 TLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP-----AWRALTAKERANILRRWFN   81 (482)
T ss_pred             ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHH
Confidence            34445689999999765677899999999999999999999999999999999999     9999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           86 KITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        86 ~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|++++++|+.+++.|+|||..++..|+..+++.++|++..+.++.+..   .+....+...++.|+|+|||++|+||
T Consensus        82 ~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~Pw  156 (482)
T PRK11241         82 LMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDT---IPGHQADKRLIVIKQPIGVTAAITPW  156 (482)
T ss_pred             HHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEEeeceEEEEECCC
Confidence            9999999999999999999999999999999999999999988776552   12111244568999999999999999

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=99.96  E-value=2.6e-28  Score=204.81  Aligned_cols=148  Identities=22%  Similarity=0.422  Sum_probs=131.8

Q ss_pred             CCCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 031230            6 PIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA   85 (163)
Q Consensus         6 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~   85 (163)
                      .+...++||||+|+.+  +.+++++||.||+++++++.++.+|+++|+++|++||+     .|++++..+|+++|.++++
T Consensus        17 ~~~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~   89 (508)
T PLN02315         17 SSRNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK-----IWMQVPAPKRGEIVRQIGD   89 (508)
T ss_pred             CccccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHH
Confidence            3445688999999864  57899999999999999999999999999999999999     9999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           86 KITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        86 ~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|++|+++|+++++.|+|||..++..||..+++.++|+++.++.+.+..   .+....+...++.|+|+|||++|+||
T Consensus        90 ~l~~~~~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~P~GVV~~I~Pw  164 (508)
T PLN02315         90 ALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSI---IPSERPNHMMMEVWNPLGIVGVITAF  164 (508)
T ss_pred             HHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCCCCCceeEEEEecceEEEEECCC
Confidence            9999999999999999999999998999999999999999888776642   12111244567889999999999999

>PLN02278 succinic semialdehyde dehydrogenase

Probab=99.96  E-value=5.1e-28  Score=202.89  Aligned_cols=147  Identities=34%  Similarity=0.604  Sum_probs=133.5

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      +.++||+|+|+.+.++..++++||.||+++++++.++.+|++.|++.|++||+     .|+.+|..+|.++|.+++++|+
T Consensus        24 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l~   98 (498)
T PLN02278         24 RTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP-----SWSKLTASERSKILRRWYDLII   98 (498)
T ss_pred             cccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHH
Confidence            46899999998765677899999999999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++..||..+++.++|+++.+.++.+..   .+....+...++.|+|+|||++|+||
T Consensus        99 ~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~P~GvV~~I~Pw  170 (498)
T PLN02278         99 ANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDI---IPSPFPDRRLLVLKQPVGVVGAITPW  170 (498)
T ss_pred             HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEeecccEEEEECCC
Confidence            9999999999999999999999999999999999999998876652   22222345678899999999999999

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=99.96  E-value=7.2e-28  Score=201.60  Aligned_cols=149  Identities=37%  Similarity=0.601  Sum_probs=134.2

Q ss_pred             CCCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 031230            6 PIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA   85 (163)
Q Consensus         6 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~   85 (163)
                      ..+.+++||||+|+.+.++.+++++||.||+++++++.++.+|++++++.|++||+     .|+.+|..+|.++|.++++
T Consensus         3 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~   77 (488)
T PRK13252          3 RQPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK-----IWAAMTAMERSRILRRAVD   77 (488)
T ss_pred             cCccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHH
Confidence            45667899999999766678899999999999999999999999999999999999     9999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           86 KITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        86 ~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|++|+++|+.++++|+|||..++.. |+..+++.+++++++.+.+.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        78 ~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~---~~~~-~~~~~~~~~~PlGVv~~I~p~  152 (488)
T PRK13252         78 ILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQ---IPLR-GGSFVYTRREPLGVCAGIGAW  152 (488)
T ss_pred             HHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCce---eccC-CCceEEEEEeeeeEEEEECCC
Confidence            99999999999999999999999975 99999999999999987765542   1222 345678999999999999999

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=99.96  E-value=8.1e-28  Score=200.69  Aligned_cols=144  Identities=42%  Similarity=0.614  Sum_probs=130.4

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      ++||+|+|+.+.++..++++||+||+++++++.++.+|+++|++.|+++|.     .|+.+|.++|.++|.+++++|++|
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~   76 (475)
T cd07117           2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK-----TWRKTTVAERANILNKIADIIDEN   76 (475)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHC
Confidence            579999999876678899999999999999999999999999999999999     999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+.+++.|+|||..++.. |+..+++.++++++++....+..   .+.. .+...++.|+|+|||++|+||
T Consensus        77 ~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw  146 (475)
T cd07117          77 KELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSA---NMID-EDTLSIVLREPIGVVGQIIPW  146 (475)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccC-CCceeEEEEeecceEEEECCC
Confidence            999999999999999999975 99999999999999887665542   1112 344578999999999999999

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=99.96  E-value=6.9e-28  Score=201.32  Aligned_cols=145  Identities=38%  Similarity=0.600  Sum_probs=131.0

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      +++||+|+|+.+.++.+++++||.||+++++++.++.+|++.|++.|++||+     .|+.+|..+|.++|.+++++|++
T Consensus         1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~   75 (479)
T cd07116           1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE-----AWGKTSVAERANILNKIADRMEA   75 (479)
T ss_pred             CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHH
Confidence            3689999999876678899999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++.. |+..+++.++++++.+....+..   .+.. .+...++.|+|+|||++|+||
T Consensus        76 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~Pw  146 (479)
T cd07116          76 NLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI---SEID-ENTVAYHFHEPLGVVGQIIPW  146 (479)
T ss_pred             hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCee---ecCC-CCceEEEEEeccceEEEECCC
Confidence            9999999999999999999975 99999999999999887765542   1112 345678999999999999999

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=99.96  E-value=1.2e-27  Score=199.14  Aligned_cols=142  Identities=44%  Similarity=0.719  Sum_probs=131.9

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      ++||+|+|+...+  +++++||+||++++.++.++.+|++.|+++|+.+|.     .|++++..+|.++|.+++++|++|
T Consensus         2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~-----~W~~~~~~eR~~iL~~~a~~l~~~   74 (472)
T COG1012           2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE-----AWSRLSAEERAAILRRIADLLEAR   74 (472)
T ss_pred             CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHHh
Confidence            6799999998754  899999999999999999999999999999999999     999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+.+++.|+|||+.++..|+..+++.++||+..++++.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        75 ~~ela~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~Pw  143 (472)
T COG1012          75 AEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGET---IPTD-KGSKALVRREPLGVVGAITPW  143 (472)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---cCCC-CCcceEEEeecceEEEEECCC
Confidence            99999999999999999999999999999999999999888773   2222 267789999999999999999

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=99.96  E-value=1.6e-27  Score=199.07  Aligned_cols=144  Identities=41%  Similarity=0.651  Sum_probs=131.0

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      ++||||+|+.+.++.+++++||+||+++++++.++.+|++.|++.|++||+     .|+.+|.++|.++|.+++++|++|
T Consensus         2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~   76 (480)
T cd07559           2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK-----TWGKTSVAERANILNKIADRIEEN   76 (480)
T ss_pred             CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHh
Confidence            579999999876678899999999999999999999999999999999999     999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+.++++|+|||+.++.. |+..+++.++++++.+....+..   .+.. .+...++.|+|+|||++|+||
T Consensus        77 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw  146 (480)
T cd07559          77 LELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSL---SEID-EDTLSYHFHEPLGVVGQIIPW  146 (480)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceeEEEEeccceEEEECCC
Confidence            999999999999999999975 99999999999999987765542   1222 355678999999999999999

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=99.96  E-value=2.2e-27  Score=198.14  Aligned_cols=149  Identities=36%  Similarity=0.636  Sum_probs=131.4

Q ss_pred             CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      ..+++||||+|+.+.++..++++||+||+++++++.++.+|++.+++.|++||+.+   .|++++..+|.++|.+++++|
T Consensus         2 ~~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~l   78 (476)
T cd07142           2 KHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEG---PWPRMTGYERSRILLRFADLL   78 (476)
T ss_pred             CcccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCC---chhhCCHHHHHHHHHHHHHHH
Confidence            34678999999976566789999999999999999999999999999999999721   499999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|+++|+.++++|+|||..++.. |+..+++.+++++.+.++..+..   .+.. .+...++.|+|+|||++|+||
T Consensus        79 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~pw  151 (476)
T cd07142          79 EKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMT---LPAD-GPHHVYTLHEPIGVVGQIIPW  151 (476)
T ss_pred             HHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccC-CCceEEEEEeceeeEEEECCC
Confidence            999999999999999999999864 99999999999999887766552   1211 234568999999999999999

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=99.96  E-value=2.7e-27  Score=199.85  Aligned_cols=147  Identities=35%  Similarity=0.582  Sum_probs=131.4

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      +++||+|+|+...++.+++++||.||+++++++.++.+|+++|++.|+++|+.+   .|+.++..+|.++|.+++++|++
T Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~---~w~~~~~~~R~~~L~~~a~~l~~  134 (538)
T PLN02466         58 TQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEG---PWPKMTAYERSRILLRFADLLEK  134 (538)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcC---ccccCCHHHHHHHHHHHHHHHHH
Confidence            578999999987667889999999999999999999999999999999999722   59999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.++++|+|||..++. .||..+++.++||+.+..+..+..   .+.. .+...++.|+|+|||++|+||
T Consensus       135 ~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw  205 (538)
T PLN02466        135 HNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLT---VPAD-GPHHVQTLHEPIGVAGQIIPW  205 (538)
T ss_pred             hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccC-CCceEEEEEecceEEEEECCC
Confidence            999999999999999999996 599999999999999988776653   2222 234568999999999999999

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=99.96  E-value=2.3e-27  Score=199.05  Aligned_cols=148  Identities=39%  Similarity=0.645  Sum_probs=132.0

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      .+++||+|+|+.+.++.+++++||+||+++++++.++.+|++.|++.|++||+.+   .|+.++.++|+++|.+++++|+
T Consensus        20 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~---~W~~~~~~~R~~~L~~~a~~l~   96 (501)
T PLN02766         20 FTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHG---PWPRMSGFERGRIMMKFADLIE   96 (501)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCC---ccccCCHHHHHHHHHHHHHHHH
Confidence            4578999999986667889999999999999999999999999999999999722   4999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++. .|+..+++.++|++..+.++.+..   .+.. .....++.|+|+|||++|+||
T Consensus        97 ~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw  168 (501)
T PLN02766         97 EHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGET---LKMS-RQLQGYTLKEPIGVVGHIIPW  168 (501)
T ss_pred             HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCce---eccC-CCceEEEEeccceEEEEECCC
Confidence            9999999999999999999997 499999999999999988876652   1112 245578999999999999999

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=99.96  E-value=3.7e-27  Score=197.12  Aligned_cols=151  Identities=30%  Similarity=0.540  Sum_probs=131.2

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      ..++||||+|+.+.++..++++||+||+++++++.++.+|+++|++.|++||..+   .|+.+|..+|.++|.+++++|+
T Consensus         5 ~~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~---~W~~~~~~~R~~~L~~~a~~l~   81 (486)
T cd07140           5 PHQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENG---EWGKMNARDRGRLMYRLADLME   81 (486)
T ss_pred             ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCC---chhcCCHHHHHHHHHHHHHHHH
Confidence            3578999999986667889999999999999999999999999999999999721   4999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCC-CCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPM-ENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++. .||..+++.++||+.+..++.+... +..... .....++.|+|+|||++|+||
T Consensus        82 ~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~r~P~GVv~~I~Pw  157 (486)
T cd07140          82 EHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTI-PINQARPNRNLTLTKREPIGVCGIVIPW  157 (486)
T ss_pred             HhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-cccccCCCCceEEEEeeccceEEEEcCC
Confidence            9999999999999999999996 5999999999999999887765421 111101 123468999999999999999

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=99.96  E-value=2.3e-27  Score=197.83  Aligned_cols=145  Identities=34%  Similarity=0.585  Sum_probs=129.2

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      +++||+|+|+.+ ++..++++||.||+++++++.++.+|+++|++.|+++|+     .|+.+|.++|+++|.+++++|++
T Consensus         2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~   75 (472)
T TIGR03374         2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA-----EWGQTTPKARAECLLKLADVIEE   75 (472)
T ss_pred             CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHH
Confidence            478999999975 467899999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++++|+.++++|+|||..++.. |+..+++.++|++.....+.+..   .+....+...++.|+|+|||++|+||
T Consensus        76 ~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~Pw  147 (472)
T TIGR03374        76 NAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLA---AGEYLEGHTSMIRRDPLGVVASIAPW  147 (472)
T ss_pred             hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cCccCCCceEEEEEecceEEEEECCC
Confidence            9999999999999999999974 99999999999999877665531   11111345678999999999999999

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=99.95  E-value=3.2e-27  Score=197.91  Aligned_cols=148  Identities=32%  Similarity=0.553  Sum_probs=132.2

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      .+++||+|+|+...++..++++||+||+++++++.++.+|++.|++.|++||..+   .|+.+|..+|+++|.+++++|+
T Consensus        19 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~---~W~~~~~~~R~~~L~~~a~~l~   95 (494)
T PRK09847         19 ENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERG---DWSLSSPAKRKAVLNKLADLME   95 (494)
T ss_pred             ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCC---ccccCCHHHHHHHHHHHHHHHH
Confidence            3578999999877667889999999999999999999999999999999999722   5999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++. .||..+++.++|++++++++.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        96 ~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~Pw  167 (494)
T PRK09847         96 AHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEV---ATTS-SHELAMIVREPVGVIAAIVPW  167 (494)
T ss_pred             HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceeEEEecceeEEEEECCC
Confidence            9999999999999999999886 499999999999999998887653   2222 345678999999999999999

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=99.95  E-value=3.1e-27  Score=197.32  Aligned_cols=143  Identities=27%  Similarity=0.449  Sum_probs=129.7

Q ss_pred             ceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 031230           12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK   91 (163)
Q Consensus        12 ~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~   91 (163)
                      +||+|+|+.+. +..++++||+||+++++++.++.++++.+++.|++||+     .|+.++.++|.++|.+++++|++++
T Consensus         1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~   74 (478)
T cd07086           1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK-----EWRKVPAPRRGEIVRQIGEALRKKK   74 (478)
T ss_pred             CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence            58999999765 67899999999999999999999999999999999999     9999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           92 SELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        92 ~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|++++++|+|||..++..|+..+++.++|++...+++.+..   .+....+...++.|+|+|||++|+||
T Consensus        75 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~pw  143 (478)
T cd07086          75 EALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLT---IPSERPGHRLMEQWNPLGVVGVITAF  143 (478)
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEEecceeEEEECCC
Confidence            9999999999999999999999999999999999988876653   12121344678999999999999999

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=99.95  E-value=6.2e-27  Score=195.51  Aligned_cols=145  Identities=27%  Similarity=0.427  Sum_probs=131.0

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      ++||+|+|+.+.++..++++||.||+++++++.++.++++++++.|++||+     .|+++|..+|.++|.+++++|.++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~   76 (477)
T TIGR01722         2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL-----TWGQTSLAQRTSVLLRYQALLKEH   76 (477)
T ss_pred             ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHH
Confidence            679999999766667899999999999999999999999999999999999     999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+.+++.|+|||..++..|+..+++.++|++.....+.++.   .+....+...++.|+|+|||++|+||
T Consensus        77 ~~~l~~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~  146 (477)
T TIGR01722        77 RDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGET---STQVATRVDVYSIRQPLGVCAGITPF  146 (477)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEEcccceEEEEccC
Confidence            99999999999999999999999999999999998887776653   11111344568899999999999999

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=99.95  E-value=7.4e-27  Score=195.08  Aligned_cols=145  Identities=32%  Similarity=0.516  Sum_probs=130.3

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      ++||||+|+.+.++..++++||+||+++++++.++.+|++.+++.|++||+     .|+.+|..+|.++|.+++++|++|
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~   76 (478)
T cd07085           2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP-----AWSATPVLKRQQVMFKFRQLLEEN   76 (478)
T ss_pred             CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHH
Confidence            579999999865567899999999999999999999999999999999999     999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+.+++.|+|||..++..|+..+++.++|++.....+.++.   .+....+...++.|+|+|||++|+||
T Consensus        77 ~~el~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~p~  146 (478)
T cd07085          77 LDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEY---LENVARGIDTYSYRQPLGVVAGITPF  146 (478)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCee---cccCCCCceeEEEEecceEEEEECCC
Confidence            99999999999999999999999999999999998776665553   11111345678999999999999999

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=99.95  E-value=1.2e-26  Score=193.88  Aligned_cols=146  Identities=34%  Similarity=0.595  Sum_probs=129.5

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCC-CCCHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS-SASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~-~~~~~~R~~~L~~~~~~l~   88 (163)
                      +++||+|+|+.+.++..++++||.||+++++++.++.+|++.|++.|++||..    .|+ .+|..+|.++|.+++++|+
T Consensus         7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~----~W~~~~~~~~R~~~L~~~a~~l~   82 (481)
T cd07143           7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET----DWGLKVSGSKRGRCLSKLADLME   82 (481)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh----hhcccCCHHHHHHHHHHHHHHHH
Confidence            47899999998766778999999999999999999999999999999999971    399 9999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.++++|+|||..++. .|+..+++.++++++++++..+..   .+.. .+...++.|+|+|||++|+||
T Consensus        83 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~P~  154 (481)
T cd07143          83 RNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQV---IETD-IKKLTYTRHEPIGVCGQIIPW  154 (481)
T ss_pred             HhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceEEEEEecceeEEEECCC
Confidence            9999999999999999997654 599999999999999988776552   1111 345678999999999999999

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=99.95  E-value=1.3e-26  Score=194.39  Aligned_cols=151  Identities=28%  Similarity=0.388  Sum_probs=131.5

Q ss_pred             CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      ..+++||+|+|+.+.++..++++||.||+++++++.++.+|++++++.|+++|+     .|+.++..+|.++|.++++.|
T Consensus        14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~-----~W~~~~~~~R~~iL~~~a~~l   88 (496)
T PLN00412         14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK-----AWAKTPLWKRAELLHKAAAIL   88 (496)
T ss_pred             cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHH
Confidence            345889999999765667899999999999999999999999999999999999     999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhcccccc-cc-CCC--CCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKA-PV-SLP--MENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~-~~-~~~--~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|+++|+.+++.|+|||..++..|+..+++.++|+++++.++.+.... .. ..+  ..+...++.|+|+|||++|+||
T Consensus        89 ~~~~~el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~  168 (496)
T PLN00412         89 KEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPF  168 (496)
T ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCC
Confidence            9999999999999999999999999999999999999988776543110 00 011  1233568899999999999999

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=99.95  E-value=1.1e-26  Score=194.37  Aligned_cols=143  Identities=29%  Similarity=0.392  Sum_probs=129.5

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      .+||+|+|+.+ ++..++++||+||+++++++.++.++++++++.|++||+     .|+.+|..+|.++|.+++++|+++
T Consensus         2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~   75 (487)
T PRK09457          2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP-----AWARLSFEERQAIVERFAALLEEN   75 (487)
T ss_pred             CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHccCCHHHHHHHHHHHHHHHHhH
Confidence            47999999875 356799999999999999999999999999999999999     999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+++++.|+|||..++..|+..+++.++++++...++.+...   . ...+...++.|+|+|||++|+||
T Consensus        76 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~P~GVv~~I~Pw  144 (487)
T PRK09457         76 KEELAEVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKR---S-EMADGAAVLRHRPHGVVAVFGPY  144 (487)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcee---c-cCCCceeEEEEeccEEEEEECCC
Confidence            999999999999999999999999999999999998877766531   1 12345678999999999999999

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=99.95  E-value=1.3e-26  Score=193.83  Aligned_cols=145  Identities=33%  Similarity=0.520  Sum_probs=128.2

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCC-CCCCCHHHHHHHHHHHHHHHHH
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKD-WSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~-w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      ++||||+|+.  ++..++++||+||+++++++.++.++++.+++.|++||.     . |+.+|..+|.++|.+++++|++
T Consensus         2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~~w~~~~~~~R~~~L~~~a~~l~~   74 (481)
T TIGR03216         2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK-----GPWGKMTVAERADLLYAVADEIER   74 (481)
T ss_pred             CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH-----hhHhhCCHHHHHHHHHHHHHHHHH
Confidence            5799999986  467899999999999999999999999999999999999     8 9999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCC-CCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSL-PMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++.. |+..+++.++++++.+..+.+... +... ...+...++.|+|+|||++|+||
T Consensus        75 ~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~Gvv~~I~p~  149 (481)
T TIGR03216        75 RFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECF-EMATPDGKGALNYAVRKPLGVVGVISPW  149 (481)
T ss_pred             hHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccc-cccCCCCCCceeEEEEeccceEEEECCC
Confidence            9999999999999999999975 999999999999999877655421 1111 11234678999999999999999

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=99.95  E-value=1.4e-26  Score=193.36  Aligned_cols=148  Identities=32%  Similarity=0.542  Sum_probs=129.3

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCC-CCCCCHHHHHHHHHHHHHHHHH
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKD-WSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~-w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .+||||+|+.+.++..++++||.||+++++++.++.+|++.+++.|++||+     . |+.++..+|.++|.+++++|++
T Consensus         1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~~w~~~~~~~R~~~L~~~a~~l~~   75 (477)
T cd07113           1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV-----SAWAKTTPAERGRILLRLADLIEQ   75 (477)
T ss_pred             CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhH-----hhhccCCHHHHHHHHHHHHHHHHH
Confidence            368999999866667899999999999999999999999999999999998     5 9999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccc-cCC-CCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAP-VSL-PMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~-~~~-~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++++|+.++++|+|||..++.. |+..+++.+++++++...+.+..... .+. ...+...++.|+|+|||++|+||
T Consensus        76 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~  152 (477)
T cd07113          76 HGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPW  152 (477)
T ss_pred             CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCC
Confidence            9999999999999999999985 99999999999999887766542100 111 11234678999999999999999

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=99.95  E-value=1.2e-26  Score=193.68  Aligned_cols=144  Identities=35%  Similarity=0.538  Sum_probs=129.3

Q ss_pred             ccceeCceEecCCCCCeeeeecCC-CCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~-tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      +++||+|+|+.+.  ..++++||. ||+++++++.++.+|+++|++.|++||+     .|+.++..+|.++|.+++++|+
T Consensus         1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l~   73 (473)
T cd07097           1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP-----AWRRTSPEARADILDKAGDELE   73 (473)
T ss_pred             CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHH
Confidence            4679999998753  347999999 5999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++..|+..+++.++||++...++.+..   .+....+...++.|+|+|||++|+||
T Consensus        74 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~P~  145 (473)
T cd07097          74 ARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGET---LPSTRPGVEVETTREPLGVVGLITPW  145 (473)
T ss_pred             HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEEEeeeeEEEEccc
Confidence            9999999999999999999999999999999999999988877653   12122355678999999999999999

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=99.95  E-value=1.5e-26  Score=193.10  Aligned_cols=141  Identities=23%  Similarity=0.451  Sum_probs=127.1

Q ss_pred             eeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230           13 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKS   92 (163)
Q Consensus        13 ~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~   92 (163)
                      +|+|+|+.+  +..++++||.||+++++++.++.++++++++.|++||+     .|+++|.++|.++|.+++++|++|++
T Consensus         2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~   74 (474)
T cd07130           2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK-----EWRDVPAPKRGEIVRQIGDALRKKKE   74 (474)
T ss_pred             eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            799999874  47799999999999999999999999999999999999     99999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           93 ELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        93 ~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|++++++|+|||..++..|+..+++.++|+++..+.+.+..   .+....+...++.|+|+|||++|+||
T Consensus        75 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~  142 (474)
T cd07130          75 ALGKLVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLT---IPSERPGHRMMEQWNPLGVVGVITAF  142 (474)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCcc---ccCCCCCceEEEEEecceeEEEEccC
Confidence            999999999999999999999999999999998877665542   12122345568899999999999999

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=99.95  E-value=1.8e-26  Score=192.59  Aligned_cols=146  Identities=36%  Similarity=0.621  Sum_probs=130.1

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      ..++||||+|+.. ++..++++||+||+++++++.++.++++++++.|+++|+     .|+.++.++|.++|.+++++|.
T Consensus         2 ~~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~   75 (475)
T PRK13473          2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP-----EWSQTTPKERAEALLKLADAIE   75 (475)
T ss_pred             CccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHH
Confidence            3468999999875 567899999999999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++++|+.++++|+|||..++.. |+..+++.+++++..++.+.+..   .+....+...++.|+|+|||++|+||
T Consensus        76 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~r~P~GVv~~I~p~  148 (475)
T PRK13473         76 ENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKA---AGEYLEGHTSMIRRDPVGVVASIAPW  148 (475)
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceeEEEEecceeEEEEccC
Confidence            99999999999999999999864 99999999999999888776652   11111244568999999999999999

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=99.95  E-value=2e-26  Score=192.73  Aligned_cols=142  Identities=31%  Similarity=0.444  Sum_probs=128.2

Q ss_pred             ceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 031230           12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK   91 (163)
Q Consensus        12 ~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~   91 (163)
                      +||+|+|+.+ ++.+++++||.||+++++++.++.+|++++++.|++||+     .|+.+|.++|.++|.+++++|++|+
T Consensus         1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~   74 (484)
T TIGR03240         1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP-----AWARLSLEERIAVVQRFAALLEERK   74 (484)
T ss_pred             CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHccCCHHHHHHHHHHHHHHHHHhH
Confidence            4899999875 467899999999999999999999999999999999999     9999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           92 SELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        92 ~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|+.+++.|+|||..++..|+..+++.+++++.....+.+..   . ....+...++.|+|+|||++|+||
T Consensus        75 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~---~-~~~~~~~~~~~~~P~GVv~~I~Pw  142 (484)
T TIGR03240        75 EALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGES---E-NPMPDGRAVLRHRPHGVVAVFGPY  142 (484)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---c-cCCCCceeEEEEecccEEEEECCC
Confidence            9999999999999999999999999999999998887766543   1 111344578999999999999999

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=99.95  E-value=1.9e-26  Score=194.06  Aligned_cols=144  Identities=31%  Similarity=0.461  Sum_probs=130.8

Q ss_pred             CccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      .++.||+|+|+.+  +..++++||+| |+++++++.++.++++.+++.|++||.     .|+.++..+|.++|.+++++|
T Consensus        32 ~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l  104 (512)
T cd07124          32 EYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP-----TWRRTPPEERARLLLRAAALL  104 (512)
T ss_pred             ccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHH
Confidence            3588999999863  56799999998 999999999999999999999999999     999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++++++|+.+++.|+|||..++..|+..+++.++|+++++.++.+..   .+.. .+...++.++|+|||++|+||
T Consensus       105 ~~~~~~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~pw  176 (512)
T cd07124         105 RRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFP---VEMV-PGEDNRYVYRPLGVGAVISPW  176 (512)
T ss_pred             HHCHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceeEEEEecceEEEEECCC
Confidence            99999999999999999999999999999999999999998885542   1212 345678999999999999999

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=99.95  E-value=2e-26  Score=193.87  Aligned_cols=146  Identities=33%  Similarity=0.534  Sum_probs=131.0

Q ss_pred             CCccceeCceEecCCCCCeeeeecCC-CCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK   86 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~   86 (163)
                      ...++||+|+|+.+  +..++++||+ ||+++++++.++.+|++.|++.|++||+     .|+.+|..+|.++|.+++++
T Consensus        31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~  103 (511)
T TIGR01237        31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE-----AWKKTPVRERAGILRKAAAI  103 (511)
T ss_pred             cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHH
Confidence            34578999999974  4568999999 5999999999999999999999999999     99999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |++++++|+.+++.|+|||..++..|+..+++.++|+++++.++.+..   .+....+...++.|+|+|||++|+||
T Consensus       104 l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~P~  177 (511)
T TIGR01237       104 MERRRHELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQG---VNLDIEGETNRYFYQPRGVAVVISPW  177 (511)
T ss_pred             HHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCCCCCceeEEEEecceeEEEECCC
Confidence            999999999999999999999999999999999999999998887642   22222355678999999999999999

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=99.95  E-value=1.8e-26  Score=193.75  Aligned_cols=145  Identities=24%  Similarity=0.301  Sum_probs=123.9

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHH-hhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQA-LSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a-~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      ++||||+|+.+. +.+++++||+||+++++++.++ +|+++||++|++| |+     .|+.+|..+|+++|.+++++|++
T Consensus         2 ~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~-----~W~~~~~~~Ra~~L~~~a~~l~~   74 (513)
T cd07128           2 QSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP-----ALRALTFHERAAMLKALAKYLME   74 (513)
T ss_pred             ceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc-----hhhcCCHHHHHHHHHHHHHHHHH
Confidence            679999999763 5789999999999999999876 8999999999997 78     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhcccccc-----ccCCCCCC-ceeEEEEec-cceEEEEcc
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKA-----PVSLPMEN-FKSYVLKEP-IGVVGLITP  162 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~-----~~~~~~~~-~~~~~~r~P-~GVV~~IsP  162 (163)
                      |+++|+.+ +.|+|||+.++..||..+++.++||++++.++.++...     ..+....+ ...++.|+| +|||++|+|
T Consensus        75 ~~~~la~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~p  153 (513)
T cd07128          75 RKEDLYAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINA  153 (513)
T ss_pred             HHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECC
Confidence            99999996 89999999999999999999999999998887642100     01111112 245788999 599999999


Q ss_pred             C
Q 031230          163 W  163 (163)
Q Consensus       163 w  163 (163)
                      |
T Consensus       154 w  154 (513)
T cd07128         154 F  154 (513)
T ss_pred             c
Confidence            9

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=99.95  E-value=2.3e-26  Score=193.57  Aligned_cols=146  Identities=32%  Similarity=0.427  Sum_probs=130.8

Q ss_pred             CCccceeCceEecCCCCCeeeeecCC-CCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK   86 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~   86 (163)
                      ...++||+|+|+.+  +..++++||+ ||+++++++.++.++++.+++.|++||+     .|+.++..+|.++|.+++++
T Consensus        35 ~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~  107 (514)
T PRK03137         35 QDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE-----TWKKWSPEDRARILLRAAAI  107 (514)
T ss_pred             cccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHH
Confidence            34578999999874  4679999999 6999999999999999999999999999     99999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |++++++|+.+++.|+|||..++..|+..+++.++||++++.++.+...  .. ...+...++.|+|+|||++|+||
T Consensus       108 l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~--~~-~~~g~~~~~~~~P~GVv~~I~Pw  181 (514)
T PRK03137        108 IRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKP--VE-SRPGEHNRYFYIPLGVGVVISPW  181 (514)
T ss_pred             HHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--cc-CCCCceEEEEEecCcEEEEECCC
Confidence            9999999999999999999999999999999999999999887753321  11 12355678999999999999999

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=99.95  E-value=2e-26  Score=192.91  Aligned_cols=144  Identities=33%  Similarity=0.610  Sum_probs=129.0

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      ++||+|+|+.+.++..++++||.||+++++++.++.++++.+++.|++||+     .|+.++..+|.++|.+++++|+++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~iL~~~a~~l~~~   76 (488)
T TIGR02299         2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK-----RWAELKAAERKRYLHKIADLIEQH   76 (488)
T ss_pred             CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHh
Confidence            569999999876667899999999999999999999999999999999999     999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+.++++|+|||..++..|+..+++.++++++.+.+......  .+.  .....++.|+|+|||++|+||
T Consensus        77 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~P~Gvv~~I~p~  145 (488)
T TIGR02299        77 ADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRT--YPV--DTHLNYTVRVPVGPVGLITPW  145 (488)
T ss_pred             HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCcc--ccC--CCceEEEEEEecceEEEECCC
Confidence            999999999999999999999999999999999998874433221  111  234568999999999999999

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=99.95  E-value=2.5e-26  Score=192.08  Aligned_cols=144  Identities=44%  Similarity=0.750  Sum_probs=129.6

Q ss_pred             eeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230           13 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKS   92 (163)
Q Consensus        13 ~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~   92 (163)
                      ||+|+|+...++..++++||.||+++++++.++.++++.+++.|++||+.+   .|+.+|..+|.++|.+++++|+++++
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~l~~~~~   77 (482)
T cd07119           1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSG---EWPHLPAQERAALLFRIADKIREDAE   77 (482)
T ss_pred             CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCC---chhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            689999876566789999999999999999999999999999999999722   59999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           93 ELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        93 ~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+.+++.|+|||..++..|+..+++.++++++++++..+..   .+.. .+...++.|+|+|||++|+||
T Consensus        78 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GvV~~I~p~  144 (482)
T cd07119          78 ELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEV---YDVP-PHVISRTVREPVGVCGLITPW  144 (482)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceEEEEEeeeeeEEEEcCC
Confidence            999999999999999999999999999999999988765542   1222 455688999999999999999

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=99.95  E-value=2.3e-26  Score=191.63  Aligned_cols=142  Identities=44%  Similarity=0.718  Sum_probs=128.4

Q ss_pred             eeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230           13 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKS   92 (163)
Q Consensus        13 ~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~   92 (163)
                      ||+|+|+.+.++..++++||+||+++++++.++.++++++++.|++||+     .|+.+|.++|.++|.+++++|+++++
T Consensus         1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~   75 (467)
T TIGR01804         1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG-----EWASMTPEERGRILRRIAELIRERNE   75 (467)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            6999999766678899999999999999999999999999999999999     99999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHH-HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           93 ELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        93 ~la~~~~~e~Gkp~~~a-~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+.++++|+|||..++ ..|+..+++.|+++++.+++..+..   .+.. .....++.|+|+|||++|+||
T Consensus        76 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~Gvv~~I~p~  143 (467)
T TIGR01804        76 ELAKLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEI---IPLP-IPSFSYTIREPLGVCVGIGAW  143 (467)
T ss_pred             HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCcc---ccCC-CCceEEEEEeeeeEEEEECCC
Confidence            99999999999999999 5699999999999999988766552   1222 124568999999999999999

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=99.95  E-value=3.3e-26  Score=190.87  Aligned_cols=146  Identities=38%  Similarity=0.589  Sum_probs=128.3

Q ss_pred             ceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 031230           12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK   91 (163)
Q Consensus        12 ~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~   91 (163)
                      +||+|+|+.+.++..++++||+||+++++++.++.++++.|+++|++||+.+   .|+.+|..+|.++|.+++++|++|+
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~---~W~~~~~~~R~~~L~~~a~~l~~~~   77 (471)
T cd07139           1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNG---PWPRLSPAERAAVLRRLADALEARA   77 (471)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCC---chhhCCHHHHHHHHHHHHHHHHHhH
Confidence            4899999876556789999999999999999999999999999999999821   3999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           92 SELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        92 ~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|+.++++|+|||..++.. |+..+++.+++++++++++.+...  .+.. .+...++.|+|+|||++|+||
T Consensus        78 ~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~P~Gvv~~I~p~  147 (471)
T cd07139          78 DELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEER--RPGS-GGGHVLVRREPVGVVAAIVPW  147 (471)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--ccCC-CCceEEEEEEeccEEEEEcCC
Confidence            99999999999999988754 999999999999999887765421  1111 245678999999999999999

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=99.95  E-value=2.7e-26  Score=191.20  Aligned_cols=143  Identities=38%  Similarity=0.569  Sum_probs=129.6

Q ss_pred             eeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230           13 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKS   92 (163)
Q Consensus        13 ~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~   92 (163)
                      ||+|+|+...++..++++||.||+++++++.++.++++.+++.|++||+     .|+.+|.++|.++|.++++.|+++++
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~   75 (468)
T cd07088           1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK-----AWERLPAIERAAYLRKLADLIRENAD   75 (468)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            6899998765678899999999999999999999999999999999999     99999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           93 ELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        93 ~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+.+++.|+|||..++..|+..+++.+++++.++.+..+..   .+....+...++.|+|+|||++|+||
T Consensus        76 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~  143 (468)
T cd07088          76 ELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEI---IPSDRPNENIFIFKVPIGVVAGILPW  143 (468)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcc---ccCccccceeEEEEecceeEEEEccC
Confidence            999999999999999999999999999999999887776543   22221245678999999999999999

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=99.95  E-value=3.2e-26  Score=190.76  Aligned_cols=139  Identities=39%  Similarity=0.634  Sum_probs=127.2

Q ss_pred             ceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 031230           12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK   91 (163)
Q Consensus        12 ~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~   91 (163)
                      +||+|+|+.+.++.+++++||.||+++++++.++.++++++++.|++||+     .|+++|..+|.++|.+++++|++|+
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~   75 (466)
T cd07138           1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP-----AWSATSVEERAALLERIAEAYEARA   75 (466)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhH
Confidence            48999999876667899999999999999999999999999999999999     9999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           92 SELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        92 ~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|++++++|+|||..++.. |+..+++.++++++.++++.+..        .....++.|+|+|||++|+||
T Consensus        76 ~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~p~  140 (466)
T cd07138          76 DELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEE--------RRGNSLVVREPIGVCGLITPW  140 (466)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccc--------cCceEEEEEeecceEEEECCC
Confidence            99999999999999999864 99999999999999988775542        123467899999999999999

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=99.95  E-value=3.8e-26  Score=190.72  Aligned_cols=144  Identities=17%  Similarity=0.229  Sum_probs=126.1

Q ss_pred             ceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCC--CCCCHHHH----HHHHHHHHH
Q 031230           12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDW--SSASGAFR----AKYLRAIAA   85 (163)
Q Consensus        12 ~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w--~~~~~~~R----~~~L~~~~~   85 (163)
                      +||+|+|+.+  +..++++||.||+++++++.++.+|+++|+++|++||+     .|  ..++..+|    .++|.++++
T Consensus         1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~-----~W~~~~~~~~~R~l~~~~il~~~a~   73 (489)
T cd07126           1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK-----SGLHNPLKNPERYLLYGDVSHRVAH   73 (489)
T ss_pred             CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----hccccCCCHHHHhhhHHHHHHHHHH
Confidence            4799999874  46799999999999999999999999999999999999     77  56779999    899999999


Q ss_pred             HHHHh--HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           86 KITER--KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        86 ~l~~~--~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .|+++  .++|++++++|+|||+.++..||..+++.++||++...++.+... ..+....+...+++|+|+|||++|+||
T Consensus        74 ~l~~~~~~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~v~r~P~GVV~~I~Pw  152 (489)
T cd07126          74 ELRKPEVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSF-NVPGDHQGQQSSGYRWPYGPVAIITPF  152 (489)
T ss_pred             HHHcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcee-ccCCCCCCceeEEEEecceEEEEECCC
Confidence            99999  599999999999999999999999999999999999877765421 011112355679999999999999999

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=99.95  E-value=4.3e-26  Score=190.27  Aligned_cols=147  Identities=29%  Similarity=0.429  Sum_probs=131.1

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA-SGAFRAKYLRAIAAKIT   88 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~-~~~~R~~~L~~~~~~l~   88 (163)
                      +++||||+|+.+. +.+++++||+||+++++++.++.+|+++|++.|++||+     .|+.+ +..+|.++|.+++++|.
T Consensus         2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~~R~~~L~~~a~~l~   75 (473)
T cd07082           2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR-----GWWPTMPLEERIDCLHKFADLLK   75 (473)
T ss_pred             CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhcCCHHHHHHHHHHHHHHHH
Confidence            4679999999864 67899999999999999999999999999999999999     99988 99999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCC--CCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLP--MENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++++|+++++.|+|||..++..|+..+++.++++++.+.++.+... +....  ..+...++.|+|+|||++|+||
T Consensus        76 ~~~~el~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~p~  151 (473)
T cd07082          76 ENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSL-PGDWFPGTKGKIAQVRREPLGVVLAIGPF  151 (473)
T ss_pred             HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cccccccCCCceeEEEEecceEEEEECCc
Confidence            99999999999999999999988999999999999999988866531 11110  1245678999999999999999

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=99.94  E-value=4.3e-26  Score=190.49  Aligned_cols=144  Identities=38%  Similarity=0.612  Sum_probs=129.6

Q ss_pred             ceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           12 LFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        12 ~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      +||||+|+.+.++..++++||.| ++++++++.++.+|++++++.|++||+     .|+.++..+|.++|.+++++|.++
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~-----~w~~~~~~~R~~~l~~~a~~l~~~   75 (478)
T cd07131           1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP-----EWRKVPAPRRAEYLFRAAELLKKR   75 (478)
T ss_pred             CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHH
Confidence            48999999765678899999999 689999999999999999999999999     999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|++++++|+|||..++..|+..+++.+++++...+++.+..   .+....+...++.|+|+|||++|+||
T Consensus        76 ~~ela~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~p~  145 (478)
T cd07131          76 KEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGET---VPSELPNKDAMTRRQPIGVVALITPW  145 (478)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcc---cccCCCCceEEEEeeceeEEEEECCc
Confidence            99999999999999999998899999999999999988766553   12222344678999999999999999

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=99.94  E-value=7.4e-26  Score=189.19  Aligned_cols=150  Identities=34%  Similarity=0.645  Sum_probs=131.8

Q ss_pred             CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      .++++||+|+|+.+.++..++++||+||+++++++.++.++++++++.|++||+.  +..|+.+|.++|.++|.+++++|
T Consensus         5 ~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~--~~~W~~~~~~~R~~~L~~~a~~l   82 (481)
T cd07141           5 KYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKL--GSPWRTMDASERGRLLNKLADLI   82 (481)
T ss_pred             ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhc--cCccccCCHHHHHHHHHHHHHHH
Confidence            4568899999998766788999999999999999999999999999999999971  01499999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+++++|+.++++|+|||..++. .|+..+++.+++++++++++.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        83 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~p~  155 (481)
T cd07141          83 ERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKT---IPMD-GDFFTYTRHEPVGVCGQIIPW  155 (481)
T ss_pred             HHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCce---ecCC-CCceEEEEEeceeEEEEEccC
Confidence            99999999999999999997764 599999999999999988887653   2222 234578999999999999999

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=99.94  E-value=7.6e-26  Score=189.28  Aligned_cols=146  Identities=36%  Similarity=0.633  Sum_probs=130.3

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCC-CCCCCHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKD-WSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~-w~~~~~~~R~~~L~~~~~~l   87 (163)
                      ..++||||+|+.+.++..++++||+||+++++++.++.++++.+++.|++||.     . |+.+|.++|.++|.+++++|
T Consensus         7 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~-----~~w~~~~~~~R~~iL~~~a~~l   81 (484)
T cd07144           7 PTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE-----SWWSKVTGEERGELLDKLADLV   81 (484)
T ss_pred             CcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----hhHhcCCHHHHHHHHHHHHHHH
Confidence            35789999999865567899999999999999999999999999999999998     6 88999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHH-HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a-~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++++++|+.++++|+|||..++ ..|+..+++.+++++++++++.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        82 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~---~~~~-~~~~~~~~~~P~GvV~~I~p~  154 (484)
T cd07144          82 EKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKT---IPTS-PNKLAYTLHEPYGVCGQIIPW  154 (484)
T ss_pred             HHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCce---ecCC-CCceEEEEEecceEEEEECcC
Confidence            9999999999999999999776 5699999999999999998886542   1212 345578999999999999999

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=99.94  E-value=9.4e-26  Score=188.37  Aligned_cols=145  Identities=40%  Similarity=0.667  Sum_probs=129.2

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCC--CCCCHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDW--SSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w--~~~~~~~R~~~L~~~~~~l   87 (163)
                      .++||||+|+.+.++..++++||.||+++++++.++.++++.+++.|++||+     .|  +.++.++|.++|.+++++|
T Consensus         4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~~~w~~~~~~~R~~~L~~~a~~l   78 (476)
T cd07091           4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFE-----TGWWRKMDPRERGRLLNKLADLI   78 (476)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcc-----cCccccCCHHHHHHHHHHHHHHH
Confidence            4789999998765667899999999999999999999999999999999999     75  5999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+++++|+.+++.|+|||..++. .|+..+++.+++++++.++..+..   .+.. .+...++.|+|+|||++|+||
T Consensus        79 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~p~  151 (476)
T cd07091          79 ERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKT---IPID-GNFLAYTRREPIGVCGQIIPW  151 (476)
T ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceEEEEEeceeEEEEECCC
Confidence            99999999999999999996664 599999999999999887776552   2222 355678999999999999999

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=99.94  E-value=8e-26  Score=190.81  Aligned_cols=146  Identities=25%  Similarity=0.280  Sum_probs=130.0

Q ss_pred             CccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      ..++||+|+|+.+ ++.+++++||.| |+++++++.++.+|++.|++.|+++|+     .|+.+|..+|.++|.+++++|
T Consensus        31 ~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~-----~W~~~~~~~R~~~L~k~a~~l  104 (533)
T TIGR01236        31 EIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK-----DWSALPFYDRAAIFLKAADLL  104 (533)
T ss_pred             eeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHH
Confidence            4578999999974 456899999997 899999999999999999999999999     999999999999999999999


Q ss_pred             H-HhHHHHHHHHHHHcCCCHHHHHHh-HHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEecc-ceEEEEccC
Q 031230           88 T-ERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPI-GVVGLITPW  163 (163)
Q Consensus        88 ~-~~~~~la~~~~~e~Gkp~~~a~~e-v~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~-GVV~~IsPw  163 (163)
                      + +++++|+.+++.|+|||..++..| |..+++.++|++.++.++.+..   ......+...++.|+|+ |||++|+||
T Consensus       105 ~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~---~~~~~~~~~~~~~~~P~~GVv~~I~Pw  180 (533)
T TIGR01236       105 SGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQ---PSESAPGEWNRTDYRPLEGFVYAISPF  180 (533)
T ss_pred             HhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCcc---ccCCCCCceeEEEEecCCCEEEEEeCC
Confidence            9 599999999999999999999875 9999999999999988876653   11111345678999999 999999999

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=99.94  E-value=7.8e-26  Score=190.35  Aligned_cols=147  Identities=22%  Similarity=0.315  Sum_probs=125.4

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHh-hccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQAL-SRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~-~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      .++||+|+|+.+. +.+++++||+||+++++++. +.+|+++|++.|++|| +     .|+.+|..+|+++|.+++++|+
T Consensus         5 ~~~~i~G~~~~~~-~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~-----~W~~~~~~eR~~~L~~~a~~l~   77 (521)
T PRK11903          5 LANYVAGRWQAGS-GAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA-----ALRALTYAQRAALLAAIVKVLQ   77 (521)
T ss_pred             hhhhCCCEEEcCC-CCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh-----hhhhCCHHHHHHHHHHHHHHHH
Confidence            3679999999753 56799999999999999997 8899999999999995 8     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccc-c-CCC--C-CCceeEEEEec-cceEEEEcc
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAP-V-SLP--M-ENFKSYVLKEP-IGVVGLITP  162 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~-~-~~~--~-~~~~~~~~r~P-~GVV~~IsP  162 (163)
                      +++++|+.++++|+|||+.++..||..+++.++||+.++..+.+..... . ..+  . .....++.|+| +|||++|+|
T Consensus        78 ~~~~ela~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~p  157 (521)
T PRK11903         78 ANRDAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINA  157 (521)
T ss_pred             HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECC
Confidence            9999999999999999999999999999999999999987765432100 0 000  0 12335788999 699999999


Q ss_pred             C
Q 031230          163 W  163 (163)
Q Consensus       163 w  163 (163)
                      |
T Consensus       158 w  158 (521)
T PRK11903        158 F  158 (521)
T ss_pred             c
Confidence            9

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=99.94  E-value=1.3e-25  Score=188.54  Aligned_cols=147  Identities=29%  Similarity=0.404  Sum_probs=131.2

Q ss_pred             CCccceeCceEecCCCCCeeeeecCC-CCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK   86 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~   86 (163)
                      ..+++||+|+|+.+  +..++++||. ||+++++++.++.+|++++++.|++||+     .|+.+|..+|.++|.+++++
T Consensus        17 ~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~   89 (500)
T cd07083          17 RAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK-----TWKDWPQEDRARLLLKAADL   89 (500)
T ss_pred             ccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHH
Confidence            34678999999874  4678999998 6999999999999999999999999999     99999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |++++++|+.+++.|+|||..++..|+..+++.+++|++++.++.+.... .+. ..+...++.|+|+|||++|+||
T Consensus        90 l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~P~GVv~~I~P~  164 (500)
T cd07083          90 LRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVE-VVP-YPGEDNESFYVGLGAGVVISPW  164 (500)
T ss_pred             HHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cCC-CCCceEEEEEeccceEEEEcCC
Confidence            99999999999999999999998889999999999999999888765311 111 1355678899999999999999

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=99.94  E-value=1.1e-25  Score=193.94  Aligned_cols=142  Identities=25%  Similarity=0.350  Sum_probs=124.0

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHH-hhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQA-LSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a-~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      ++||||+|+.+. +..++++||+||+++++++.++ +|+++|++.|+++ |+     .|+.+|..+|+++|.+++++|++
T Consensus         2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~-----~W~~~~~~eR~~~L~~~a~~l~~   74 (663)
T TIGR02278         2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP-----ALRALTFHERARMLKALAQYLSE   74 (663)
T ss_pred             ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch-----hhhcCCHHHHHHHHHHHHHHHHH
Confidence            579999999763 5679999999999999999999 5999999999996 99     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhc--------cccccccCCCCC-CceeEEEEecc-ceEEE
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD--------AKQKAPVSLPME-NFKSYVLKEPI-GVVGL  159 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~--------~~~~~~~~~~~~-~~~~~~~r~P~-GVV~~  159 (163)
                      |+++|+. +++|+|||+.++..||..+++.++||+..++++.        ++.   .+.... +...++.|+|+ |||++
T Consensus        75 ~~~ela~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~P~~Gvv~~  150 (663)
T TIGR02278        75 RKEALYA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEF---EPLSKDGSFQGRHILTPKGGVAVQ  150 (663)
T ss_pred             HHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCce---eccCCCCccceEEEEEeCCceEEE
Confidence            9999999 5999999999999999999999999999987743        221   111111 23578999998 99999


Q ss_pred             EccC
Q 031230          160 ITPW  163 (163)
Q Consensus       160 IsPw  163 (163)
                      |+||
T Consensus       151 I~pw  154 (663)
T TIGR02278       151 INAF  154 (663)
T ss_pred             EcCC
Confidence            9999

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=99.94  E-value=7.3e-26  Score=189.81  Aligned_cols=134  Identities=25%  Similarity=0.417  Sum_probs=123.4

Q ss_pred             CCccceeCceEecCCCCCeeeeecCCCC-CeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPTTE-EIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK   86 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg-~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~   86 (163)
                      ...++||+|+|+.  ++..++++||.|+ +++++++.++.+|++.|++.|+++|+     .|+++|..+|+++|.+++++
T Consensus        36 ~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~-----~W~~~~~~~R~~~L~~~a~~  108 (500)
T TIGR01238        36 WQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP-----TWNATPAKERAAKLDRLADL  108 (500)
T ss_pred             eecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHH
Confidence            3468999999987  4678999999996 89999999999999999999999999     99999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |++++++|+.++++|+|||..++..||..+++.++++++..+.+.+.               +.++|+|||++|+||
T Consensus       109 l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~---------------~~~~P~GVV~~I~pw  170 (500)
T TIGR01238       109 LELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE---------------FSVESRGVFVCISPW  170 (500)
T ss_pred             HHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc---------------eeccCcceEEEECCC
Confidence            99999999999999999999999999999999999999987654321               368999999999999

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=99.94  E-value=1.9e-25  Score=186.12  Aligned_cols=140  Identities=29%  Similarity=0.487  Sum_probs=124.9

Q ss_pred             ceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 031230           16 GEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELA   95 (163)
Q Consensus        16 g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la   95 (163)
                      |+|+.+.++..++++||+||+++++++.++.+|++.+++.|++||+     .|+.++..+|.++|.+++++|++++++|+
T Consensus         1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela   75 (465)
T cd07151           1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK-----EWAATLPQERAEILEKAAQILEERRDEIV   75 (465)
T ss_pred             CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            5677655567899999999999999999999999999999999999     99999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           96 NLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        96 ~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+++.|+|||..++..|+..+++.+++++.+...+.+..   .+....+...++.|+|+|||++|+||
T Consensus        76 ~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~  140 (465)
T cd07151          76 EWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRI---LPSDVPGKENRVYREPLGVVGVISPW  140 (465)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCcc---ccCCCCCceeEEEEecceEEEEECCC
Confidence            999999999999998999999999999999887765542   11111355678999999999999999

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=99.94  E-value=3.6e-25  Score=186.58  Aligned_cols=145  Identities=21%  Similarity=0.215  Sum_probs=128.4

Q ss_pred             CccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      ..++||+|+|+.+  +.+++++||+| |+++++++.++.+|++.|++.|++||.     .|+.+|..+|.++|.+++++|
T Consensus        32 ~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l  104 (522)
T cd07123          32 EIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK-----EWARMPFEDRAAIFLKAADLL  104 (522)
T ss_pred             ccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHH
Confidence            3578999999864  56899999995 999999999999999999999999999     999999999999999999999


Q ss_pred             HH-hHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEecc-ceEEEEccC
Q 031230           88 TE-RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPI-GVVGLITPW  163 (163)
Q Consensus        88 ~~-~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~-GVV~~IsPw  163 (163)
                      ++ ++++|+.++++|+|||..++.. |+..+++.++|++.++.++.+...   .....+...++.|+|+ |||++|+||
T Consensus       105 ~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~P~~GVv~~I~Pw  180 (522)
T cd07123         105 SGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQP---LSSPAGVWNRLEYRPLEGFVYAVSPF  180 (522)
T ss_pred             HhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccc---cCCCCCceeEEEEecCCceEEEECCc
Confidence            97 8999999999999999999975 899999999999999888766531   1111245678999999 999999999

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=99.94  E-value=3.2e-25  Score=186.83  Aligned_cols=144  Identities=28%  Similarity=0.428  Sum_probs=129.9

Q ss_pred             ccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      .--||+|+|..  ++.+++++||.| |+++++++.++.+|++.+++.|++||+     .|+.++.++|.++|.+++++|+
T Consensus        33 ~~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~  105 (518)
T cd07125          33 AIPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA-----GWSATPVEERAEILEKAADLLE  105 (518)
T ss_pred             cCceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHH
Confidence            34589999973  578899999999 999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++++|+.+++.|+|||..++..|+..+++.++++++++.++.+...  .+.+ .+...++.++|+|||++|+||
T Consensus       106 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~--~~~~-~g~~~~~~~~P~GVV~~I~p~  177 (518)
T cd07125         106 ANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPE--LPGP-TGELNGLELHGRGVFVCISPW  177 (518)
T ss_pred             HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--ccCC-CCceeEEEEecccEEEEECCc
Confidence            99999999999999999999989999999999999999988776531  2222 245678999999999999999

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=99.93  E-value=3.8e-25  Score=184.79  Aligned_cols=137  Identities=42%  Similarity=0.622  Sum_probs=124.1

Q ss_pred             CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      .++++||+|+|+...++..++++||.||+++++++.++.++++++++.|+++|+     .|+++|..+|.++|.+++++|
T Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l   94 (480)
T cd07111          20 RSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE-----SWSALPGHVRARHLYRIARHI   94 (480)
T ss_pred             ccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHH
Confidence            456889999999765567899999999999999999999999999999999999     999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+++++|+.++++|+|||+.++.. |+..+++.+++++++.....+.              ++.|+|+|||++|+||
T Consensus        95 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~--------------~~~~~P~GVV~~I~Pw  157 (480)
T cd07111          95 QKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDTE--------------LAGWKPVGVVGQIVPW  157 (480)
T ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------------cccceecceEEEECCC
Confidence            999999999999999999999974 9999999999998876543221              2468999999999999

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=99.93  E-value=3.8e-25  Score=184.07  Aligned_cols=131  Identities=28%  Similarity=0.478  Sum_probs=119.8

Q ss_pred             CCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Q 031230           24 KKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCG  103 (163)
Q Consensus        24 ~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~G  103 (163)
                      .+.++++||+||+++++++.++.+++++|++.|+++|+     .|+.++..+|+++|.+++++|++|+++|+.+++.|+|
T Consensus         6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G   80 (462)
T PRK13968          6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR-----DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMG   80 (462)
T ss_pred             CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhC
Confidence            35788999999999999999999999999999999999     9999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          104 KPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       104 kp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ||..++..|+..+++.++||+..+.++.+...  .  ...+...++.|+|+|||++|+||
T Consensus        81 k~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~P~GvV~~I~Pw  136 (462)
T PRK13968         81 KPINQARAEVAKSANLCDWYAEHGPAMLKAEP--T--LVENQQAVIEYRPLGTILAIMPW  136 (462)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc--c--cCCCceEEEEEeccceEEEEcCC
Confidence            99999999999999999999999887765421  1  12345678999999999999999

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=99.93  E-value=4.9e-25  Score=185.87  Aligned_cols=146  Identities=31%  Similarity=0.392  Sum_probs=128.2

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      +...|.+.+  +.++..++++||+||+++++++.++.+|++.+++.|++||+     .|+++|..+|.++|.+++++|.+
T Consensus        19 ~~~~~~~~~--~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~iL~~~a~~l~~   91 (524)
T PRK09407         19 LRRLTARVD--GAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR-----AWAATPVRERAAVLLRFHDLVLE   91 (524)
T ss_pred             HHHHHhhcC--CCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHccCCHHHHHHHHHHHHHHHHH
Confidence            345677766  44678899999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++++|+.++++|+|||..++..|+..+++.++|+++++.++.+......... .....++.|+|+|||++|+||
T Consensus        92 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~P~  164 (524)
T PRK09407         92 NREELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALP-VLTKTTELRQPKGVVGVISPW  164 (524)
T ss_pred             hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCC-CCceEEEEEecceEEEEEeCC
Confidence            9999999999999999999988999999999999999988776532111111 124678999999999999999

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=99.93  E-value=1.1e-24  Score=188.28  Aligned_cols=143  Identities=23%  Similarity=0.281  Sum_probs=123.5

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHH-hhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQA-LSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a-~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      +++||||+|+.+ ++..++++||.||+++++++.++ +|+++|++.|++| |+     .|+++|..+|+++|.+++++|+
T Consensus         5 ~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~-----~W~~~~~~eR~~~L~~~a~~l~   77 (675)
T PRK11563          5 LQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP-----ALRALTFHERAAMLKALAKYLL   77 (675)
T ss_pred             ccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh-----hhhcCCHHHHHHHHHHHHHHHH
Confidence            468999999976 45779999999999999999988 6999999999998 78     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhc--------cccccccCCCCCC-ceeEEEEecc-ceEE
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD--------AKQKAPVSLPMEN-FKSYVLKEPI-GVVG  158 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~--------~~~~~~~~~~~~~-~~~~~~r~P~-GVV~  158 (163)
                      +|+++|+. ++.|+|||..++..|+..+++.++||+.++.+..        ++.   .+....+ ...++.++|+ |||+
T Consensus        78 ~~~~ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~p~~GVv~  153 (675)
T PRK11563         78 ERKEELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEV---EPLSKGGTFAGRHILTPLEGVAV  153 (675)
T ss_pred             HhHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCcc---ccccCCCcccceEEEeecCceEE
Confidence            99999998 5899999999999999999999999999886653        221   1111112 2357899997 9999


Q ss_pred             EEccC
Q 031230          159 LITPW  163 (163)
Q Consensus       159 ~IsPw  163 (163)
                      +|+||
T Consensus       154 ~I~Pw  158 (675)
T PRK11563        154 HINAF  158 (675)
T ss_pred             EECCC
Confidence            99999

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=99.93  E-value=1.3e-24  Score=180.74  Aligned_cols=131  Identities=32%  Similarity=0.481  Sum_probs=118.0

Q ss_pred             eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230           27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL  106 (163)
Q Consensus        27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~  106 (163)
                      ++++||.||+++++++.++.+|++.+++.|++||+     .|+.++..+|.++|.+++++|++++++|++++++|+|||.
T Consensus         3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   77 (457)
T PRK09406          3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR-----DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTL   77 (457)
T ss_pred             eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCH
Confidence            67899999999999999999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .++..||..+++.++||++.+.++.+..... .........++.|+|+|||++|+||
T Consensus        78 ~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GvV~~I~Pw  133 (457)
T PRK09406         78 ASAKAEALKCAKGFRYYAEHAEALLADEPAD-AAAVGASRAYVRYQPLGVVLAVMPW  133 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCcccc-ccCCCCceEEEEEecceeEEEECCc
Confidence            9998899999999999999998887543111 1111234678999999999999999

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=99.93  E-value=9.6e-25  Score=181.69  Aligned_cols=136  Identities=40%  Similarity=0.704  Sum_probs=123.1

Q ss_pred             EecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 031230           18 WREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANL   97 (163)
Q Consensus        18 ~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~   97 (163)
                      |+.+.+ .+++++||.||+++++++.++.++++.+++.|++||+     .|+.++..+|.++|.+++++|++++++|+++
T Consensus         1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~   74 (462)
T PF00171_consen    1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK-----EWSKLPAAERARILERFADLLEERRDELAEL   74 (462)
T ss_dssp             EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH-----HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred             CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH-----hhhhhhhhhHHHHHHHHHHHHhhcccccccc
Confidence            666644 6799999999999999999999999999999999999     9999999999999999999999999999999


Q ss_pred             HHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           98 ETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        98 ~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++.|+|||..++..|+..+++.++|++++++++.+..   .+.. .+...++.++|+|||++|+||
T Consensus        75 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~i~p~  136 (462)
T PF00171_consen   75 IALETGKPIAEARGEVDRAIDFLRYYADAARKLAGEV---LPSD-PGSRNYTRREPLGVVLIITPW  136 (462)
T ss_dssp             HHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEE---EEES-TTEEEEEEEEE-SEEEEEE-S
T ss_pred             cccccccccccccchhhhhhhhhhhhhhcccceehhh---cccc-cccccccccccccceeecccc
Confidence            9999999999999999999999999999999977642   2332 678899999999999999998

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=99.92  E-value=1.1e-23  Score=175.81  Aligned_cols=143  Identities=26%  Similarity=0.367  Sum_probs=124.0

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .++||||+|+..  +..++++||+||+++++++.++.+|+++|++.|+++|+     .   ++..+|+++|.+++++|++
T Consensus         4 ~~~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~---~~~~~R~~~l~~~a~~l~~   73 (472)
T TIGR03250         4 EALRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----T---LTRYERSAILDRAAALLAA   73 (472)
T ss_pred             CCceECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----h---CCHHHHHHHHHHHHHHHHH
Confidence            368999999863  57799999999999999999999999999999988775     3   6899999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccC--CCCCCceeEEEEecc-ceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVS--LPMENFKSYVLKEPI-GVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~r~P~-GVV~~IsPw  163 (163)
                      ++++|+.++++|+|||..++..|+..+++.++|+++.+.++.+... +..  ....+...++.|+|+ |||++|+||
T Consensus        74 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~  149 (472)
T TIGR03250        74 RKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIF-SCDLTPHGKARKVFTQREPLLGVISAITPF  149 (472)
T ss_pred             hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-ccccCCCCCCceEEEEEcCCCCEEEEEcCC
Confidence            9999999999999999999999999999999999999887765421 111  111244578999998 999999999

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]

Probab=99.92  E-value=1.5e-25  Score=181.35  Aligned_cols=149  Identities=29%  Similarity=0.511  Sum_probs=136.0

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      ..||+|+++.+++++++..+||.|+++|++++.++..|++.|+.+|+.||..|   .|++++..+|.+.|.++++++++|
T Consensus       423 ~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g---~w~~~sar~rg~~~y~la~lme~h  499 (881)
T KOG2452|consen  423 QLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENG---RWGKISARDRGRLMYRLADLMEQH  499 (881)
T ss_pred             hhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcC---cccccchhhhhhhhhhccchhhhc
Confidence            56999999999999999999999999999999999999999999999999987   999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCC-ceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMEN-FKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+.+.+++.|.-+..+. ..|...|+.+||+++|.+++.+.. .|+....++ ..+.+.++|+|||++|.||
T Consensus       500 ~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~t-ipi~~arpn~nl~lt~~epigv~g~i~pw  573 (881)
T KOG2452|consen  500 QEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGST-IPINQARPNRNLTLTRKEPVGVCGIIIPW  573 (881)
T ss_pred             cchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCce-eccccCCCCCcceeeecCcceeEEEeccC
Confidence            99999999999999888886 599999999999999999999874 233322233 4589999999999999999

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=99.92  E-value=4.1e-24  Score=177.37  Aligned_cols=129  Identities=20%  Similarity=0.306  Sum_probs=117.6

Q ss_pred             eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230           27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL  106 (163)
Q Consensus        27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~  106 (163)
                      ++++||.||+++++++.++.++++++++.|++||.     .|+.++..+|.++|.+++++|++++++|+++++.|+|||+
T Consensus         1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   75 (451)
T cd07150           1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP-----AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTY   75 (451)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence            46899999999999999999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .++..|+..+++.+++++..+.++.+..   .+....+...++.|+|+|||++|+||
T Consensus        76 ~~a~~ev~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~P~  129 (451)
T cd07150          76 GKAWFETTFTPELLRAAAGECRRVRGET---LPSDSPGTVSMSVRRPLGVVAGITPF  129 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCCCCCceeEEEEecccEEEEECCC
Confidence            9999999999999999999988776543   22222355678999999999999999

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=99.92  E-value=8.6e-24  Score=175.69  Aligned_cols=127  Identities=32%  Similarity=0.571  Sum_probs=114.1

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE  108 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~  108 (163)
                      ++||+||+++++++.++.+|+++|++.|+++|+.+   .|+. +..+|+++|.+++++|++|+++|+.+++.|+|||..+
T Consensus         1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~---~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~   76 (455)
T cd07120           1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDET---DWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGE   76 (455)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCC---ccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence            47999999999999999999999999999999821   3998 8999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +..||..+++.++||++++.+..+..   .+.. .+...++.|+|+|||++|+||
T Consensus        77 a~~Ev~~~i~~l~~~~~~~~~~~g~~---~~~~-~~~~~~~~~~P~Gvv~~I~P~  127 (455)
T cd07120          77 ARFEISGAISELRYYAGLARTEAGRM---IEPE-PGSFSLVLREPMGVAGIIVPW  127 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcc---cccC-CCceEEEEEecceeEEEECCC
Confidence            99999999999999999988876653   1111 345678999999999999999

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=99.92  E-value=8.1e-24  Score=175.89  Aligned_cols=131  Identities=34%  Similarity=0.508  Sum_probs=116.3

Q ss_pred             eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230           27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL  106 (163)
Q Consensus        27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~  106 (163)
                      ++++||.||+++++++.++.+|++.+++.|++||+     .|+.+|.++|.++|.+++++|++|+++|+.+++.|+|||.
T Consensus         1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   75 (456)
T cd07145           1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD-----VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPI   75 (456)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence            46899999999999999999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhhhhccccccccCC--CCCCceeEEEEeccceEEEEccC
Q 031230          107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSL--PMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .++..|+..+++.++++++++..+.+.. .+...  ...+...++.|+|+|||++|+||
T Consensus        76 ~~a~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~  133 (456)
T cd07145          76 KQSRVEVERTIRLFKLAAEEAKVLRGET-IPVDAYEYNERRIAFTVREPIGVVGAITPF  133 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccCccccccCCceeEEEEecceeEEEECCC
Confidence            9999999999999999999887665542 11111  01244578899999999999999

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=99.91  E-value=1.1e-23  Score=175.00  Aligned_cols=130  Identities=65%  Similarity=1.086  Sum_probs=116.2

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE  108 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~  108 (163)
                      ++||.||+++++++.++.++++++++.|++||+     .|+.+|.++|.++|.+++++|++|+++|+.+++.|+|||..+
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~   75 (456)
T cd07110           1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP-----RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDE   75 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Confidence            479999999999999999999999999999999     999999999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +..|+..+++.++++++.++++.+......+....+...++.|+|+|||++|+||
T Consensus        76 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~  130 (456)
T cd07110          76 AAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPW  130 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCC
Confidence            9889999999999999999887532111122222355679999999999999999

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=99.91  E-value=2.2e-23  Score=173.28  Aligned_cols=128  Identities=39%  Similarity=0.616  Sum_probs=113.9

Q ss_pred             ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230           30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA  109 (163)
Q Consensus        30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a  109 (163)
                      +||+||+++++++.++.+|+++|++.|++||+.+   .|+++|.++|.++|.+++++|++|+++|+.++++|+|||..++
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a   78 (454)
T cd07118           2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKG---PWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQA   78 (454)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCC---ccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence            5999999999999999999999999999999822   4999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          110 VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       110 ~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ..|+..+++.+++++.+...+.+..   .+....+...++.|+|+|||++|+||
T Consensus        79 ~~ev~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~GvV~~I~p~  129 (454)
T cd07118          79 RGEIEGAADLWRYAASLARTLHGDS---YNNLGDDMLGLVLREPIGVVGIITPW  129 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceeeEEeecceEEEEECCC
Confidence            9999999999999999877665542   11111345678999999999999999

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=99.91  E-value=2.9e-23  Score=172.84  Aligned_cols=132  Identities=34%  Similarity=0.582  Sum_probs=118.7

Q ss_pred             CeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 031230           25 KRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGK  104 (163)
Q Consensus        25 ~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gk  104 (163)
                      .+++++||.||+++++++.++.++++.+++.|++||+.+   .|+.+|..+|.++|.+++++|.+|+++|+.+++.|+||
T Consensus         2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk   78 (462)
T cd07112           2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESG---VWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGK   78 (462)
T ss_pred             CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCC---ccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Confidence            468899999999999999999999999999999999721   49999999999999999999999999999999999999


Q ss_pred             CHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          105 PLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       105 p~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |..++.. |+..+++.++|+++++.++.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        79 ~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GvV~~i~p~  134 (462)
T cd07112          79 PISDALAVDVPSAANTFRWYAEAIDKVYGEV---APTG-PDALALITREPLGVVGAVVPW  134 (462)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHhcCce---ecCC-CCeEEEEEEeeeeeEEEECCC
Confidence            9999975 99999999999999998877653   1211 355678999999999999999

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=99.91  E-value=2.4e-23  Score=173.05  Aligned_cols=128  Identities=34%  Similarity=0.488  Sum_probs=115.6

Q ss_pred             ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230           30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA  109 (163)
Q Consensus        30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a  109 (163)
                      .||.||+++++++.++.+|++.+++.|++||+     .|+.+|..+|.++|.+++++|++|+++|++++++|+|||..++
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a   75 (454)
T cd07101           1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR-----AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHA   75 (454)
T ss_pred             CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHH
Confidence            48999999999999999999999999999999     9999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          110 VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       110 ~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ..|+..+++.++|+++++.++.+....+...+ .....++.|+|+|||++|+||
T Consensus        76 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~  128 (454)
T cd07101          76 FEEVLDVAIVARYYARRAERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPW  128 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCccccccCC-CCceEEEEEEeccEEEEECCC
Confidence            88999999999999999988876542211112 234678999999999999999

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.91  E-value=3.7e-23  Score=184.65  Aligned_cols=140  Identities=30%  Similarity=0.443  Sum_probs=124.4

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCC-eeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEE-IVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~-~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      +.+|+|      ++..++++||+|++ ++++++.++.++++.|++.|++||+     .|+.+|..+|+++|.+++++|++
T Consensus       554 ~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~-----~W~~~~~~~Ra~iL~kaAdll~~  622 (1038)
T PRK11904        554 GPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP-----AWSRTPVEERAAILERAADLLEA  622 (1038)
T ss_pred             cceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHHH
Confidence            345666      35678999999998 9999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++++|+.+++.|+|||+.++..||..++++++||+..+.++.+... ..+.+ .+..+++.++|+|||++|+||
T Consensus       623 ~~~eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~-~l~g~-~ge~n~~~~~P~GVv~~IsPw  694 (1038)
T PRK11904        623 NRAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPE-KLPGP-TGESNELRLHGRGVFVCISPW  694 (1038)
T ss_pred             hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc-ccCCC-CCceeEEEEecceEEEEECCC
Confidence            9999999999999999999999999999999999999988765421 12222 356788999999999999999

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=99.91  E-value=3.8e-23  Score=171.88  Aligned_cols=130  Identities=27%  Similarity=0.365  Sum_probs=115.8

Q ss_pred             eeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCC-CCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230           28 PIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKD-WSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL  106 (163)
Q Consensus        28 ~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~-w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~  106 (163)
                      +++||.||+++++++.++.++++.|++.|++||.     . |+.+|.++|.++|.+++++|++++++|+.+++.|+|||.
T Consensus         2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   76 (455)
T cd07148           2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL-----DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPL   76 (455)
T ss_pred             CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence            5789999999999999999999999999999999     7 567999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhhhhccccccccC--CCCCCceeEEEEeccceEEEEccC
Q 031230          107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVS--LPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .++..|+..+++.++++++++.++.+... +..  ....+...++.|+|+|||++|+||
T Consensus        77 ~~a~~ev~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~  134 (455)
T cd07148          77 VDAKVEVTRAIDGVELAADELGQLGGREI-PMGLTPASAGRIAFTTREPIGVVVAISAF  134 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCccc-ccccccCCCCceEEEEEecceEEEEECCC
Confidence            99999999999999999999988876531 111  111345678999999999999999

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=99.91  E-value=3.8e-23  Score=172.02  Aligned_cols=130  Identities=37%  Similarity=0.582  Sum_probs=115.5

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS-SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE  107 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~-~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~  107 (163)
                      ++||+||+++++++.++.+|++++++.|++||.     .|+ .+|..+|.++|.+++++|++++++|+.+++.|+|||..
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~   75 (459)
T cd07089           1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD-----TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVM   75 (459)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence            479999999999999999999999999999999     999 99999999999999999999999999999999999998


Q ss_pred             HHHH-hHHHHHHHHHHHHHhhhhhccccccccCC-CCCCceeEEEEeccceEEEEccC
Q 031230          108 EAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSL-PMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       108 ~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++.. |+..+++.++|+++++.++.++...+... ...+...++.|+|+|||++|+||
T Consensus        76 ~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~  133 (459)
T cd07089          76 TARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPW  133 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCC
Confidence            7754 99999999999999998887664211110 11355678999999999999999

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=99.91  E-value=2.9e-23  Score=172.63  Aligned_cols=126  Identities=46%  Similarity=0.756  Sum_probs=115.4

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE  108 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~  108 (163)
                      ++||.||+++++++.++.++++++++.|+++|.     .|+.++..+|.++|.+++++|.+++++|+.++++|+|||..+
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~   75 (457)
T cd07090           1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK-----EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEE   75 (457)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Confidence            579999999999999999999999999999999     999999999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +..|+..+++.++|++++.+.+.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        76 a~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVV~~I~p~  126 (457)
T cd07090          76 ARVDIDSSADCLEYYAGLAPTLSGEH---VPLP-GGSFAYTRREPLGVCAGIGAW  126 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCee---eccC-CCceEEEEEeecceEEEECCC
Confidence            99999999999999999888765542   2222 255678999999999999999

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=99.91  E-value=3.5e-23  Score=171.79  Aligned_cols=127  Identities=35%  Similarity=0.591  Sum_probs=115.5

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE  108 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~  108 (163)
                      ++||.||+++++++.++.++++.+++.|++||+     .|+.+|.++|.++|.+++++|++++++|+.+++.|+|||..+
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~   75 (448)
T TIGR01780         1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK-----TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKE   75 (448)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Confidence            479999999999999999999999999999999     999999999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +..|+..+++.++|++....++.+..   .+....+...++.|+|+|||++|+||
T Consensus        76 a~~ev~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~  127 (448)
T TIGR01780        76 AKGEILYAASFLEWFAEEAKRVYGDT---IPSPQSDKRLLVIKQPVGVCAAITPW  127 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcc---ccCCCCCceeEEEEeeeeEEEEEcCC
Confidence            99999999999999999888776653   12222345567889999999999999

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=99.91  E-value=3.4e-23  Score=172.17  Aligned_cols=126  Identities=34%  Similarity=0.642  Sum_probs=114.7

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE  108 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~  108 (163)
                      ++||.||+++++++.++.+|++++++.|++||+     .|+.+|..+|.++|.+++++|++++++|+.++++|+|||..+
T Consensus         1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~   75 (456)
T cd07107           1 VINPATGQVLARVPAASAADVDRAVAAARAAFP-----EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSA   75 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHH
Confidence            579999999999999999999999999999999     999999999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +..|+..+++.++|+++....+.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        76 a~~ev~~~~~~l~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~p~  126 (456)
T cd07107          76 MLGDVMVAAALLDYFAGLVTELKGET---IPVG-GRNLHYTLREPYGVVARIVAF  126 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcc---ccCC-CCceEEEEEecceEEEEECCc
Confidence            98999999999999998876665542   2222 244678999999999999999

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=99.91  E-value=3.7e-23  Score=171.78  Aligned_cols=132  Identities=29%  Similarity=0.385  Sum_probs=116.8

Q ss_pred             eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230           27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL  106 (163)
Q Consensus        27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~  106 (163)
                      ++++||+||+++++++.++.++++++++.|++||+     .|+.++..+|.++|.+++++|++++++|++++++|+|||.
T Consensus         1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~   75 (452)
T cd07147           1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR-----PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPI   75 (452)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence            46899999999999999999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhhhhcccccc-ccCCCCCCceeEEEEeccceEEEEccC
Q 031230          107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKA-PVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .++..|+..+++.++++++.+.++.+.... .......+...++.|+|+|||++|+||
T Consensus        76 ~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~  133 (452)
T cd07147          76 KDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPF  133 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCC
Confidence            999999999999999999998777554210 011111345678899999999999999

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=99.91  E-value=4.4e-23  Score=171.42  Aligned_cols=126  Identities=40%  Similarity=0.615  Sum_probs=115.4

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS-SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE  107 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~-~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~  107 (163)
                      ++||+||+++++++.++.+|++++++.|++||+     .|. .+|.++|.++|.+++++|.+|+++|+.+++.|+|||..
T Consensus         1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~-----~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~   75 (454)
T cd07109           1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE-----SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLT   75 (454)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH
Confidence            579999999999999999999999999999999     776 99999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          108 EAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       108 ~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++..|+..+++.++|+++..+++.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        76 ~a~~ev~~~~~~l~~~~~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~P~  127 (454)
T cd07109          76 QARADVEAAARYFEYYGGAADKLHGET---IPLG-PGYFVYTVREPHGVTGHIIPW  127 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCcc---cccC-CCceEEEEEeeeeEEEEECCC
Confidence            999999999999999999988876653   2222 355789999999999999999

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=99.90  E-value=4.9e-23  Score=171.05  Aligned_cols=131  Identities=27%  Similarity=0.447  Sum_probs=117.4

Q ss_pred             eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230           27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL  106 (163)
Q Consensus        27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~  106 (163)
                      ++++||+||+++++++.++.+|++++++.|++||.     .|+.+|..+|.++|.+++++|++++++|++++++|+|||.
T Consensus         1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~   75 (453)
T cd07094           1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAE-----NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPI   75 (453)
T ss_pred             CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence            36899999999999999999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhhhhccccccccCC--CCCCceeEEEEeccceEEEEccC
Q 031230          107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSL--PMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .++..|+..+++.++++++++.++.+... +...  ...+...++.|+|+|||++|+||
T Consensus        76 ~~a~~ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~  133 (453)
T cd07094          76 KDARVEVDRAIDTLRLAAEEAERIRGEEI-PLDATQGSDNRLAWTIREPVGVVLAITPF  133 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCccc-cccccccCCCceEEEEEeccceEEEECCC
Confidence            99999999999999999999988866421 1111  11245678999999999999999

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=99.90  E-value=1.4e-22  Score=168.40  Aligned_cols=129  Identities=33%  Similarity=0.477  Sum_probs=115.8

Q ss_pred             ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230           30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA  109 (163)
Q Consensus        30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a  109 (163)
                      +||+||+++++++.++.++++++++.|+++|.     .|++++..+|.++|.+++++|++++++|+.++++|+|||..++
T Consensus         1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~   75 (453)
T cd07099           1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR-----AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADA   75 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence            58999999999999999999999999999999     9999999999999999999999999999999999999999988


Q ss_pred             HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          110 VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       110 ~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ..|+..+++.++|+++.+.++.+....+......+...++.++|+|||++|+||
T Consensus        76 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~  129 (453)
T cd07099          76 GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPW  129 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCC
Confidence            889999999999999999888765322111112355678999999999999999

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=99.90  E-value=1e-22  Score=169.39  Aligned_cols=126  Identities=34%  Similarity=0.662  Sum_probs=113.8

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-H
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL-E  107 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~-~  107 (163)
                      ++||.||++++.++.++.+|++++++.|+++|+     .|+.++..+|.++|.+++++|++++++|++++++|+|||. .
T Consensus         1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~   75 (457)
T cd07108           1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP-----EWAATPARERGKLLARIADALEARSEELARLLALETGNALRT   75 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHH
Confidence            579999999999999999999999999999999     9999999999999999999999999999999999999997 6


Q ss_pred             HHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          108 EAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       108 ~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++..|+..+++.+++++.....+.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        76 ~a~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~p~  127 (457)
T cd07108          76 QARPEAAVLADLFRYFGGLAGELKGET---LPFG-PDVLTYTVREPLGVVGAILPW  127 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCce---eccC-CCeeEEEEeecceEEEEECCC
Confidence            888899999999999999877665542   2222 345678999999999999999

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=99.90  E-value=1.7e-22  Score=167.77  Aligned_cols=126  Identities=26%  Similarity=0.456  Sum_probs=115.5

Q ss_pred             ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230           30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA  109 (163)
Q Consensus        30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a  109 (163)
                      +||+||+++++++.++.+|++.+++.|++||+     .|+.++..+|.++|.+++++|++++++|+.+++.|+|||..++
T Consensus         1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~   75 (452)
T cd07102           1 ISPIDGSVIAERPLASLEAVRAALERARAAQK-----GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQA   75 (452)
T ss_pred             CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH
Confidence            58999999999999999999999999999999     9999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          110 VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       110 ~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ..|+..+++.+++++..+.++.+...  .+.. .+...++.++|+|||++|+||
T Consensus        76 ~~ev~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~P~GVv~~i~p~  126 (452)
T cd07102          76 GGEIRGMLERARYMISIAEEALADIR--VPEK-DGFERYIRREPLGVVLIIAPW  126 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcc--cCCC-CCeeEEEEEEeccEEEEEcCC
Confidence            99999999999999999988766532  1212 355678999999999999998

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=99.90  E-value=2.2e-22  Score=167.33  Aligned_cols=129  Identities=36%  Similarity=0.593  Sum_probs=114.5

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE  108 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~  108 (163)
                      ++||.||+++++++.++.++++.+++.|++||..+   .|+.+|.++|.++|.+++++|.+++++|+.++++|+|||..+
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~   77 (457)
T cd07114           1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGG---AWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRE   77 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCC---chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence            47999999999999999999999999999999721   499999999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +..|+..+++.+++++...+.+.+..   .+....+...++.|+|+|||++|+||
T Consensus        78 ~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~  129 (457)
T cd07114          78 TRAQVRYLAEWYRYYAGLADKIEGAV---IPVDKGDYLNFTRREPLGVVAAITPW  129 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEEecceEEEEECCC
Confidence            99999999999999998877665442   12121345678999999999999999

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=99.89  E-value=2.6e-22  Score=166.57  Aligned_cols=127  Identities=39%  Similarity=0.663  Sum_probs=115.9

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE  108 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~  108 (163)
                      ++||.||+++++++.++.++++.+++.|+++|+     .|+.+|.++|.++|.+++++|.+++++|+.+++.|+|||..+
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~   75 (451)
T cd07103           1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK-----TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAE   75 (451)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence            479999999999999999999999999999999     999999999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +..|+..+++.+++++..+.++.+..   .+....+...++.++|+|||++|+||
T Consensus        76 a~~ev~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~i~p~  127 (451)
T cd07103          76 ARGEVDYAASFLEWFAEEARRIYGRT---IPSPAPGKRILVIKQPVGVVAAITPW  127 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCcceEEEEeeceEEEEECCC
Confidence            99999999999999999888776653   22222355678999999999999998

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=99.89  E-value=2.2e-22  Score=167.16  Aligned_cols=125  Identities=40%  Similarity=0.708  Sum_probs=114.4

Q ss_pred             ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230           30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA  109 (163)
Q Consensus        30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a  109 (163)
                      +||.||+++++++.++.++++++++.|++||.     .|+.+|.++|.++|.+++++|++|+++|+.++++|+|||..++
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~-----~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~   76 (453)
T cd07115           2 LNPATGELIARVAQASAEDVDAAVAAARAAFE-----AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAA   76 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence            69999999999999999999999999999999     9999999999999999999999999999999999999999999


Q ss_pred             HH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          110 VW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       110 ~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .. |+..+++.+++++.+..+..+..   .+.. .+...++.|+|+|||++|+||
T Consensus        77 ~~~ev~~~i~~l~~~~~~~~~~~g~~---~~~~-~~~~~~~~~~P~Gvv~~i~p~  127 (453)
T cd07115          77 RRLDVPRAADTFRYYAGWADKIEGEV---IPVR-GPFLNYTVREPVGVVGAIVPW  127 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCce---ecCC-CCceEEEEecceeEEEEEcCC
Confidence            75 99999999999999887776542   1222 355678999999999999999

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=99.89  E-value=3.1e-22  Score=166.20  Aligned_cols=131  Identities=32%  Similarity=0.537  Sum_probs=116.2

Q ss_pred             eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230           27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL  106 (163)
Q Consensus        27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~  106 (163)
                      |+++||.||+++++++.++.++++.+++.|++||.     .|+.+|..+|.++|.+++++|.+++++|+.++..|+|||.
T Consensus         1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~   75 (453)
T cd07149           1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK-----EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPI   75 (453)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCH
Confidence            46899999999999999999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhhhhccccccccCC-C-CCCceeEEEEeccceEEEEccC
Q 031230          107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSL-P-MENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~-~-~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .++..|+..+++.++++++.+..+.+... +... + ..+...++.|+|+|||++|+||
T Consensus        76 ~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  133 (453)
T cd07149          76 KDARKEVDRAIETLRLSAEEAKRLAGETI-PFDASPGGEGRIGFTIREPIGVVAAITPF  133 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCccc-cccccCCCCCeeEEEEeecceEEEEECCC
Confidence            99999999999999999998877765421 1110 1 1234568999999999999999

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=99.89  E-value=3.9e-22  Score=165.57  Aligned_cols=127  Identities=35%  Similarity=0.567  Sum_probs=113.1

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE  108 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~  108 (163)
                      ++||.||+++++++.++.+|++++++.|++||+     .|+.++..+|.++|.+++++|.+++++|++++++|+|||..+
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~   75 (450)
T cd07092           1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP-----SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHL   75 (450)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHH
Confidence            579999999999999999999999999999999     999999999999999999999999999999999999999987


Q ss_pred             HH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          109 AV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       109 a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +. .|+..+++.+++++...+.+.+..   .+....+...++.|+|+|||++|+||
T Consensus        76 ~~~~ev~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~P~  128 (450)
T cd07092          76 VRDDELPGAVDNFRFFAGAARTLEGPA---AGEYLPGHTSMIRREPIGVVAQIAPW  128 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCcc---cCccCCCceeEEEEeccceEEEECCC
Confidence            75 599999999999998877665542   11111344678999999999999999

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=99.89  E-value=5.2e-22  Score=165.44  Aligned_cols=129  Identities=33%  Similarity=0.449  Sum_probs=112.5

Q ss_pred             ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230           30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA  109 (163)
Q Consensus        30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a  109 (163)
                      +||.||+++++++.++.+|++.|++.|++||+     .|+++|..+|.++|.+++++|.+++++|+.+++.|+|||+.++
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   75 (465)
T cd07098           1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR-----EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDA   75 (465)
T ss_pred             CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence            59999999999999999999999999999999     9999999999999999999999999999999999999999999


Q ss_pred             HH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          110 VW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       110 ~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .. |+..+++.++++++...........+......+...++.|+|+|||++|+||
T Consensus        76 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~  130 (465)
T cd07098          76 SLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSW  130 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEccc
Confidence            64 9999999999999887765443211111101234568899999999999999

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=99.89  E-value=4.8e-22  Score=164.90  Aligned_cols=124  Identities=32%  Similarity=0.529  Sum_probs=111.5

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE  108 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~  108 (163)
                      ++||+||+++++++.++.+|++++++.|++||.     .|+.++..+|.++|.+++++|.+|+++|+.+++.|+|||..+
T Consensus         1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~   75 (446)
T cd07106           1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP-----GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAE   75 (446)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Confidence            479999999999999999999999999999999     999999999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +..|+..+++.++++++...  .+..   ... ..+...++.|+|+|||++|+||
T Consensus        76 a~~ev~~~~~~l~~~~~~~~--~~~~---~~~-~~~~~~~~~~~P~GVv~~I~p~  124 (446)
T cd07106          76 AQFEVGGAVAWLRYTASLDL--PDEV---IED-DDTRRVELRRKPLGVVAAIVPW  124 (446)
T ss_pred             HHHHHHHHHHHHHHHHhhhh--cCcc---ccC-CCCceEEEEEEcceEEEEEcCC
Confidence            98899999999999998763  1221   111 1355679999999999999999

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.88  E-value=5.4e-22  Score=179.44  Aligned_cols=121  Identities=27%  Similarity=0.429  Sum_probs=111.9

Q ss_pred             CCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 031230           23 LKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETID  101 (163)
Q Consensus        23 ~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e  101 (163)
                      .+..++++||+| ++++++++.++.+|++.|++.|+++|+     .|+.+|..+|+++|.+++++|++|+++|+.+++.|
T Consensus       657 ~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~-----~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~E  731 (1318)
T PRK11809        657 AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP-----IWFATPPAERAAILERAADLMEAQMQTLMGLLVRE  731 (1318)
T ss_pred             CCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence            356789999998 789999999999999999999999999     99999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          102 CGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       102 ~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|||+.++..||..++++++||+..+.....               .+.++|+|||++|+||
T Consensus       732 aGKt~~~A~~EV~eaidflryyA~~a~~~~~---------------~~~~~PlGVV~~IsPW  778 (1318)
T PRK11809        732 AGKTFSNAIAEVREAVDFLRYYAGQVRDDFD---------------NDTHRPLGPVVCISPW  778 (1318)
T ss_pred             hCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC---------------CceeecccEEEEECCC
Confidence            9999999999999999999999988654211               1468999999999999

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=99.88  E-value=1.3e-21  Score=162.47  Aligned_cols=127  Identities=31%  Similarity=0.416  Sum_probs=110.6

Q ss_pred             eeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 031230           28 PIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE  107 (163)
Q Consensus        28 ~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~  107 (163)
                      +++||+||+++++++.++.++++.|+++|++        .|+.++..+|.++|.++++.|++++++|+.+++.|+|||..
T Consensus         2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~--------~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~   73 (451)
T cd07146           2 EVRNPYTGEVVGTVPAGTEEALREALALAAS--------YRSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLK   73 (451)
T ss_pred             CccCCCCCCEEEEEcCCCHHHHHHHHHHHHH--------HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence            6889999999999999999999999998764        47779999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHhhhhhccccccccCC--CCCCceeEEEEeccceEEEEccC
Q 031230          108 EAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSL--PMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       108 ~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++..|+..+++.++|+++++.++.+... +...  ...+...++.|+|+|||++|+||
T Consensus        74 ~a~~ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~  130 (451)
T cd07146          74 DTRYEVGRAADVLRFAAAEALRDDGESF-SCDLTANGKARKIFTLREPLGVVLAITPF  130 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCccc-ccccccCCCCceEEEEEeccceEEEEccC
Confidence            9999999999999999998877755421 1111  11345578999999999999999

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=99.88  E-value=1.7e-21  Score=161.98  Aligned_cols=126  Identities=41%  Similarity=0.660  Sum_probs=113.5

Q ss_pred             eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230           29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE  108 (163)
Q Consensus        29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~  108 (163)
                      ++||.||+++++++.++.++++++++.|++||.     .|+.++.++|.++|.+++++|.+++++|+.+++.|+|||..+
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~   75 (455)
T cd07093           1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP-----GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITL   75 (455)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence            469999999999999999999999999999999     999999999999999999999999999999999999999988


Q ss_pred             HHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          109 AVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       109 a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +.. |+..+++.++++++...+..+..   .+.. .+...++.++|+|||++|+||
T Consensus        76 ~~~~ev~~~i~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~i~p~  127 (455)
T cd07093          76 ARTRDIPRAAANFRFFADYILQLDGES---YPQD-GGALNYVLRQPVGVAGLITPW  127 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHhCCcc---ccCC-CCceEEEEEEeeeEEEEECCC
Confidence            865 99999999999999887754432   2222 355678999999999999999

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.87  E-value=3.2e-21  Score=174.24  Aligned_cols=129  Identities=32%  Similarity=0.501  Sum_probs=116.1

Q ss_pred             ceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           12 LFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        12 ~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      .+|+|+..   .+..++++||.| ++++++++.++.+++++|++.|++||+     .|+.+|..+|+++|.+++++|+++
T Consensus       557 ~~i~g~~~---~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~-----~W~~~~~~~Ra~iL~raAdll~~~  628 (1208)
T PRK11905        557 PLLAGGDV---DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP-----EWSATPAAERAAILERAADLMEAH  628 (1208)
T ss_pred             ceeccccc---cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHHh
Confidence            34566543   245689999999 999999999999999999999999999     999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+.+++.|+||++.++..||..+++.++||+..+..+.+.               ..++|+|||++|+||
T Consensus       629 ~~eL~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~~---------------~~~~P~GVv~~IsPw  686 (1208)
T PRK11905        629 MPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLNG---------------PGHKPLGPVVCISPW  686 (1208)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------------ceecCccEEEEEcCC
Confidence            9999999999999999999999999999999999987655321               356899999999999

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=99.86  E-value=9.5e-21  Score=157.04  Aligned_cols=120  Identities=25%  Similarity=0.366  Sum_probs=108.4

Q ss_pred             CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHH
Q 031230           35 EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDID  114 (163)
Q Consensus        35 g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~  114 (163)
                      |+++++++.++.++++++++.|++||+     .|+.+|..+|.++|.+++++|++|+++|++++++|+|||..++..|+.
T Consensus         1 ~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~   75 (443)
T cd07152           1 GAVLGEVGVADAADVDRAAARAAAAQR-----AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVG   75 (443)
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHH
Confidence            578999999999999999999999999     999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          115 DVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       115 ~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+++.+++++....+..+..   .+.. .+...++.|+|+|||++|+||
T Consensus        76 ~~i~~l~~~~~~~~~~~~~~---~~~~-~g~~~~~~~~P~Gvv~~i~p~  120 (443)
T cd07152          76 AAIGELHEAAGLPTQPQGEI---LPSA-PGRLSLARRVPLGVVGVISPF  120 (443)
T ss_pred             HHHHHHHHHHHhHHHhCCcc---cccc-CCceeEEEEecceEEEEECCC
Confidence            99999999998876554432   2212 355678999999999999999

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=99.86  E-value=8.8e-21  Score=158.34  Aligned_cols=115  Identities=22%  Similarity=0.283  Sum_probs=101.1

Q ss_pred             CCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHH
Q 031230           44 ATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEY  122 (163)
Q Consensus        44 ~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~  122 (163)
                      -...|++.|+++|+++|+     .|+.++..+|.++|.+++++|++|+++|+.+++.|+|||..++.. ||..+++.++|
T Consensus         7 ~~~~~v~~av~~a~~af~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~   81 (484)
T PLN02174          7 FGAADASILVTELRRSFD-----DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKL   81 (484)
T ss_pred             cCHHHHHHHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence            356899999999999999     999999999999999999999999999999999999999999976 99999999999


Q ss_pred             HHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++++++++.++..........+...++.|+|+|||++|+||
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw  122 (484)
T PLN02174         82 ALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAW  122 (484)
T ss_pred             HHHHHHHHhcccccccccccCCcceEEEEecceEEEEECCC
Confidence            99999988874322222222344678999999999999999

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=99.85  E-value=1e-20  Score=155.64  Aligned_cols=129  Identities=31%  Similarity=0.483  Sum_probs=115.7

Q ss_pred             eeCceEecCCCCCeeeeecCCCC-CeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 031230           13 FINGEWREPVLKKRIPIVNPTTE-EIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK   91 (163)
Q Consensus        13 ~i~g~~~~~~~~~~~~v~~P~tg-~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~   91 (163)
                      .++|+.+.  .+...+|+||++. .+++.+.+++.+|+++|++.|..+++     .|..+|..+|+.+|.+++|+|+.+.
T Consensus       117 ~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p-----~W~atp~~eRAaiL~raAdlme~~m  189 (769)
T COG4230         117 IVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP-----IWSATPPAERAAILERAADLMEAQM  189 (769)
T ss_pred             ccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCc-----ccccCCHHHHHHHHHHHHHHHHHHH
Confidence            46666654  4667899999986 58899999999999999999999999     9999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           92 SELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        92 ~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+|..++.+|.||++.++..||..++|+||||+.+.+.-.+.               ..+.|+|+|.+||||
T Consensus       190 ~~L~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~---------------~~~~~~G~vVcISPW  246 (769)
T COG4230         190 PQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN---------------LTHRPLGPVVCISPW  246 (769)
T ss_pred             HHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc---------------cccCCCCcEEEECCC
Confidence            999999999999999999999999999999999987753322               335789999999999

>PLN02203 aldehyde dehydrogenase

Probab=99.84  E-value=5e-20  Score=154.02  Aligned_cols=116  Identities=21%  Similarity=0.227  Sum_probs=101.6

Q ss_pred             CCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHH
Q 031230           43 AATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFE  121 (163)
Q Consensus        43 ~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~  121 (163)
                      ++..+|+++|++.|++||+     .|+.++..+|.++|.+++++|++|+++|+++++.|+|||..++. .||..+++.++
T Consensus         2 ~~~~~~v~~av~~a~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~   76 (484)
T PLN02203          2 EAPGETLEGSVAELRETYE-----SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSAN   76 (484)
T ss_pred             CCCHHHHHHHHHHHHHHHH-----hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence            4678999999999999999     99999999999999999999999999999999999999999996 59999999999


Q ss_pred             HHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          122 YYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++.+.++.+......+....+...++.|+|+|||++|+||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pw  118 (484)
T PLN02203         77 LALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSW  118 (484)
T ss_pred             HHHHHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCC
Confidence            999998888765211112211345678999999999999999

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=99.84  E-value=5.8e-20  Score=154.04  Aligned_cols=116  Identities=21%  Similarity=0.238  Sum_probs=102.6

Q ss_pred             CCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHH
Q 031230           43 AATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFE  121 (163)
Q Consensus        43 ~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~  121 (163)
                      ..+.++++++++.|+++|.     .|+.++..+|.++|.+++++|++|+++|+++++.|+|||..++.. ||..+++.++
T Consensus         3 ~~~~~~i~~av~~a~~a~~-----~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~   77 (493)
T PTZ00381          3 PDNPEIIPPIVKKLKESFL-----TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIE   77 (493)
T ss_pred             CCCHHHHHHHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence            5688999999999999999     999999999999999999999999999999999999999999975 9999999999


Q ss_pred             HHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          122 YYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++++++++.+......+........++.|+|+|||++|+||
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~Pw  119 (493)
T PTZ00381         78 HLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAW  119 (493)
T ss_pred             HHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCC
Confidence            999999998766432222211234678999999999999999

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=99.83  E-value=1.2e-19  Score=153.22  Aligned_cols=128  Identities=19%  Similarity=0.138  Sum_probs=106.9

Q ss_pred             eeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 031230           28 PIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE  107 (163)
Q Consensus        28 ~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~  107 (163)
                      .=+||+|++++++++.++.   +.++++|++||+     .|++++..+|.++|.+++++|++|+++|+.++++|+|||+.
T Consensus        68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~-----~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~  139 (551)
T TIGR02288        68 GERSPYGVELGVTYPQCDG---DALLDAAHAALP-----GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFM  139 (551)
T ss_pred             cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHH
Confidence            3479999999999999996   899999999999     99999999999999999999999999999999999999998


Q ss_pred             HHHH-----hHHHHHHHHHHHHHhhhhhccccccccCCCC---CCceeEEEEeccceEEEEccC
Q 031230          108 EAVW-----DIDDVAGCFEYYADLAEGLDAKQKAPVSLPM---ENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       108 ~a~~-----ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~---~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++..     ++...++.++|++....++.+......+...   .....++.|+|+|||++|+||
T Consensus       140 ~a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~Pw  203 (551)
T TIGR02288       140 MAFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCS  203 (551)
T ss_pred             HHHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCc
Confidence            8742     7888999999999988777654210001110   112234589999999999999

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=99.83  E-value=1.7e-19  Score=149.32  Aligned_cols=115  Identities=17%  Similarity=0.254  Sum_probs=99.5

Q ss_pred             CCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHH
Q 031230           44 ATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEY  122 (163)
Q Consensus        44 ~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~  122 (163)
                      .+.+|+++|+++|++||+     .|+.++..+|.++|.++++.|++|+++|+.+++.|+|||..++.. ||..+++.++|
T Consensus         2 ~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~   76 (436)
T cd07135           2 TPLDEIDSIHSRLRATFR-----SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILH   76 (436)
T ss_pred             CCHHHHHHHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHH
Confidence            578999999999999999     999999999999999999999999999999999999999999975 99999999999


Q ss_pred             HHHhhhhhcccccccc-CCCCCCceeEEEEeccceEEEEccC
Q 031230          123 YADLAEGLDAKQKAPV-SLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       123 ~a~~~~~~~~~~~~~~-~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+..+.++.+...... .....+...++.|+|+|||++|+||
T Consensus        77 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~  118 (436)
T cd07135          77 MLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPW  118 (436)
T ss_pred             HHHHHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCC
Confidence            9999887654321111 0111244578999999999999999

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=99.83  E-value=1.6e-19  Score=152.60  Aligned_cols=135  Identities=19%  Similarity=0.103  Sum_probs=112.1

Q ss_pred             CCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 031230           21 PVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETI  100 (163)
Q Consensus        21 ~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~  100 (163)
                      +.++...+++||+|++.+++++.+   |++.+++.|++||+     .|++++..+|.++|.+++++|.+++++|+.++++
T Consensus        61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~-----~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~  132 (549)
T cd07127          61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP-----GWRDAGARARAGVCLEILQRLNARSFEMAHAVMH  132 (549)
T ss_pred             CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            445678899999999999899888   99999999999999     9999999999999999999999999999999999


Q ss_pred             HcCCCHHHHHH-----hHHHHHHHHHHHHHhhhhhccccccccCCC---CCCceeEEEEeccceEEEEccC
Q 031230          101 DCGKPLEEAVW-----DIDDVAGCFEYYADLAEGLDAKQKAPVSLP---MENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       101 e~Gkp~~~a~~-----ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+||++.++..     |++.+++.++|+++...++.+......+..   .......+.++|+|||++|+||
T Consensus       133 e~Gk~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~  203 (549)
T cd07127         133 TTGQAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCS  203 (549)
T ss_pred             HHCCCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCc
Confidence            99999987752     799999999999998877654321000000   0011224588999999999998

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=99.82  E-value=2.2e-19  Score=148.53  Aligned_cols=107  Identities=31%  Similarity=0.440  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhh
Q 031230           48 DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA  127 (163)
Q Consensus        48 ~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~  127 (163)
                      |++++++.|+++|+     .|+.+|.++|.++|.+++++|++|+++|+++++.|+|||..++..||..+++.++++++..
T Consensus         1 ~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~   75 (431)
T cd07095           1 QVDAAVAAARAAFP-----GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAY   75 (431)
T ss_pred             CHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999     9999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          128 EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .++.+...   . ...+...++.++|+|||++|+||
T Consensus        76 ~~~~~~~~---~-~~~~~~~~~~~~P~GVv~~I~Pw  107 (431)
T cd07095          76 HERTGERA---T-PMAQGRAVLRHRPHGVMAVFGPF  107 (431)
T ss_pred             HHhcCCcc---c-CCCCceEEEEEecceEEEEECCC
Confidence            88776532   1 11355689999999999999999

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=99.80  E-value=6.6e-19  Score=146.20  Aligned_cols=108  Identities=25%  Similarity=0.301  Sum_probs=93.6

Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhh
Q 031230           51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEG  129 (163)
Q Consensus        51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~  129 (163)
                      +.+++|++||+     .|+.+|..+|+++|.+++++|++|+++|+.+++.|+|||+.++.. ||..+++.++|+++.+++
T Consensus         2 ~~v~~a~~a~~-----~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~   76 (449)
T cd07136           2 SLVEKQRAFFK-----TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKK   76 (449)
T ss_pred             hHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57889999999     999999999999999999999999999999999999999999974 999999999999999888


Q ss_pred             hccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +.+....+......+...++.|+|+|||++|+||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~  110 (449)
T cd07136          77 WMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPW  110 (449)
T ss_pred             HhCCCccCCccccCCceeEEEEecCeEEEEECCC
Confidence            7655211111111245678999999999999999

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=99.80  E-value=8.8e-19  Score=144.92  Aligned_cols=108  Identities=28%  Similarity=0.375  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhh
Q 031230           48 DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA  127 (163)
Q Consensus        48 ~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~  127 (163)
                      |++++++.|++||+     .|+.++.++|.++|.+++++|++|+++|+++++.|+|||..++..|+..+++.++|+++..
T Consensus         1 ~v~~ai~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~   75 (432)
T cd07105           1 DADQAVEAAAAAFP-----AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLI   75 (432)
T ss_pred             CHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999     9999999999999999999999999999999999999999888889999999999999998


Q ss_pred             hhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          128 EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .++.+..   .+....+...++.|+|+|||++|+||
T Consensus        76 ~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~p~  108 (432)
T cd07105          76 TQIIGGS---IPSDKPGTLAMVVKEPVGVVLGIAPW  108 (432)
T ss_pred             HHhcCee---cccCCCCceeEEEEecceEEEEECCc
Confidence            8764432   12111345678999999999999999

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]

Probab=99.80  E-value=3.6e-19  Score=141.40  Aligned_cols=136  Identities=26%  Similarity=0.373  Sum_probs=123.6

Q ss_pred             CCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 031230           23 LKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDC  102 (163)
Q Consensus        23 ~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~  102 (163)
                      ..++++.+.|+||+.++.++..++.||++.|..|++|++     .|...++..|++.|+.+.+.+-+|+|.+++..++|+
T Consensus        62 ~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk-----tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDt  136 (583)
T KOG2454|consen   62 SDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK-----TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDT  136 (583)
T ss_pred             CCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh-----hhhhccHHHHHHHHHHHHHHHhhchhheeeeeeccc
Confidence            445788999999999999999999999999999999999     999999999999999999999999999999999999


Q ss_pred             CCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          103 GKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       103 Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ||+..+|. +||..+.+.+.|...+..+++.+...+....+...-++++|+|+||+++|.||
T Consensus       137 GKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsW  198 (583)
T KOG2454|consen  137 GKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSW  198 (583)
T ss_pred             CchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeec
Confidence            99999975 59999999999999999999988655433333345579999999999999999

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=99.80  E-value=7.3e-19  Score=145.29  Aligned_cols=106  Identities=42%  Similarity=0.576  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhh
Q 031230           49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAE  128 (163)
Q Consensus        49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~  128 (163)
                      ++.|++.|++||.     .|+.+|.++|.++|.+++++|++++++|+.++++|+|||..++..|+..+++.++|++..++
T Consensus         1 v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~   75 (429)
T cd07100           1 IEAALDRAHAAFL-----AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAE   75 (429)
T ss_pred             CHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4689999999999     99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          129 GLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++.+....  +.  .+...++.|+|+|||++|+||
T Consensus        76 ~~~~~~~~--~~--~~~~~~~~~~P~GvV~~I~P~  106 (429)
T cd07100          76 AFLADEPI--ET--DAGKAYVRYEPLGVVLGIMPW  106 (429)
T ss_pred             HhcCCeec--cC--CCceEEEEEEeeeEEEEEcCC
Confidence            88654321  11  244678999999999999999

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=99.79  E-value=2.7e-18  Score=141.99  Aligned_cols=109  Identities=20%  Similarity=0.298  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhh
Q 031230           50 ELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAE  128 (163)
Q Consensus        50 ~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~  128 (163)
                      .++++.|++||.     .|+.++..+|.++|++++++|++++++|+.+++.|+|||..++.. |+..+++.++++++.+.
T Consensus         2 ~~a~~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~   76 (432)
T cd07137           2 PRLVRELRETFR-----SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELK   76 (432)
T ss_pred             hHHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            358999999999     999999999999999999999999999999999999999999975 99999999999999987


Q ss_pred             hhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          129 GLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++.+......+........++.|+|+|||++|+||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~  111 (432)
T cd07137          77 KWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAW  111 (432)
T ss_pred             HHhCCcccCCCcccCCceeEEEEecCcEEEEEcCC
Confidence            76554211111111234568899999999999999

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=99.78  E-value=3.4e-18  Score=141.81  Aligned_cols=108  Identities=29%  Similarity=0.303  Sum_probs=92.9

Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhh
Q 031230           51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG  129 (163)
Q Consensus        51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~  129 (163)
                      +|+++|++||+     .|+.+|..+|.++|.++++.|++|+++|+.+++.|+|||..++. .||..+++.++++++++.+
T Consensus         2 ~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~   76 (443)
T cd07132           2 EAVRRAREAFS-----SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPE   76 (443)
T ss_pred             hHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999     99999999999999999999999999999999999999999996 5999999999999999988


Q ss_pred             hccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +.+...............++.|+|+|||++|+||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~  110 (443)
T cd07132          77 WMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAW  110 (443)
T ss_pred             HhCCccCCCccccCCCceEEEEecccEEEEEcCC
Confidence            7654311111111234578999999999999999

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=99.78  E-value=2.7e-18  Score=141.81  Aligned_cols=108  Identities=27%  Similarity=0.410  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhh
Q 031230           48 DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA  127 (163)
Q Consensus        48 ~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~  127 (163)
                      |++++++.|++||+     .|+.++..+|.++|.+++++|.+++++|+++++.|+|||..++..|+..+++.+++++.+.
T Consensus         1 ~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~   75 (431)
T cd07104           1 DVDRAYAAAAAAQK-----AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLP   75 (431)
T ss_pred             CHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999     9999999999999999999999999999999999999999999999999999999999988


Q ss_pred             hhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          128 EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+..+..   .+....+...++.++|+|||++|+||
T Consensus        76 ~~~~~~~---~~~~~~g~~~~~~~~P~GVv~~i~p~  108 (431)
T cd07104          76 RRPEGEI---LPSDVPGKESMVRRVPLGVVGVISPF  108 (431)
T ss_pred             HHhcCcc---ccCCCCCceeEEEEeeeeeEEEECCC
Confidence            7665542   22222355678999999999999999

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=99.77  E-value=8.8e-18  Score=138.78  Aligned_cols=108  Identities=30%  Similarity=0.391  Sum_probs=91.9

Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhh
Q 031230           51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG  129 (163)
Q Consensus        51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~  129 (163)
                      ++++.|++||.     .|+.+|..+|.++|.+++++|++++++|+.+++.|+|||..++. .|+..+++.+++++..+..
T Consensus         2 ~~v~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~   76 (426)
T cd07087           2 ELVARLRETFL-----TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKK   76 (426)
T ss_pred             hHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            48899999999     99999999999999999999999999999999999999988776 4999999999999998887


Q ss_pred             hccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +.+...........+...++.|+|+|||++|+||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~  110 (426)
T cd07087          77 WMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPW  110 (426)
T ss_pred             HhCCcccCCccccCCCceEEEEecCcEEEEEcCC
Confidence            7554211111111244678999999999999999

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=99.76  E-value=1.4e-17  Score=137.75  Aligned_cols=108  Identities=21%  Similarity=0.216  Sum_probs=92.6

Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhh
Q 031230           51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG  129 (163)
Q Consensus        51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~  129 (163)
                      +++++|++||+     .|+.+|..+|+++|.+++++|++|+++|+.+++.|+|||..++. .|+..+++.+++++..+..
T Consensus         2 ~~~~~a~~a~~-----~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~   76 (433)
T cd07134           2 RVFAAQQAHAL-----ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKK   76 (433)
T ss_pred             hHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57889999999     99999999999999999999999999999999999999999997 5999999999999998776


Q ss_pred             hccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +.+....+.+....+...++.|+|+|||++|+||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~  110 (433)
T cd07134          77 WMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPW  110 (433)
T ss_pred             HhCCcccCCccccCCCceEEEEecCCEEEEEcCC
Confidence            5543211112222345678999999999999999

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=99.75  E-value=2.3e-17  Score=136.61  Aligned_cols=108  Identities=21%  Similarity=0.246  Sum_probs=91.0

Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-HHHHH-HhHHHHHHHHHHHHHhhh
Q 031230           51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAV-WDIDDVAGCFEYYADLAE  128 (163)
Q Consensus        51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp-~~~a~-~ev~~~i~~l~~~a~~~~  128 (163)
                      +.++.|++||+     .|+.+|..+|.++|++++++|++|+++|+.++++|+||+ ..++. .|+..+++.++|+++.+.
T Consensus         2 ~~~~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~   76 (434)
T cd07133           2 ALLERQKAAFL-----ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLK   76 (434)
T ss_pred             hHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46788999999     999999999999999999999999999999999999985 66775 599999999999999988


Q ss_pred             hhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          129 GLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++.+......+....+...++.|+|+|||++|+||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pw  111 (434)
T cd07133          77 KWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPW  111 (434)
T ss_pred             HHhCCcccCCccccCCCceEEEEecccEEEEEcCC
Confidence            77665321111111244578999999999999999

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=99.72  E-value=3.3e-17  Score=135.53  Aligned_cols=103  Identities=20%  Similarity=0.223  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHH-HHHHHHHh
Q 031230           49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAG-CFEYYADL  126 (163)
Q Consensus        49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~-~l~~~a~~  126 (163)
                      |+.|++.|++||.     .|+++|..+|.++|.+++++|++++++|+++++.|+|||+.++.. |+..+++ .+++++..
T Consensus         1 ~~~av~~A~~A~~-----~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~   75 (436)
T cd07122           1 VDELVERARKAQR-----EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM   75 (436)
T ss_pred             ChHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            4689999999999     999999999999999999999999999999999999999999986 8888888 78888863


Q ss_pred             hhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          127 AEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                        +..+..    ... .+...++.|+|+|||++|+||
T Consensus        76 --~~~g~~----~~~-~~~~~~~~~~P~GVv~~I~pw  105 (436)
T cd07122          76 --KTVGVI----EED-EEKGIVEIAEPVGVIAALIPS  105 (436)
T ss_pred             --cceeee----ccC-CCCCeEEEeecccEEEEEeCC
Confidence              232221    111 244578999999999999999

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=99.72  E-value=4.5e-17  Score=134.87  Aligned_cols=103  Identities=28%  Similarity=0.298  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHH--HHHHHHHh
Q 031230           49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAG--CFEYYADL  126 (163)
Q Consensus        49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~--~l~~~a~~  126 (163)
                      +++|++.|++||+     .|+.+|..+|.++|.+++++|++|+++|+.+++.|+|||+.++..++..++.  .+++++..
T Consensus         1 ~~~Ai~~A~~A~~-----~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~~   75 (439)
T cd07081           1 LDDAVAAAKVAQQ-----GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKDE   75 (439)
T ss_pred             CHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcc
Confidence            4689999999999     9999999999999999999999999999999999999999999876665554  23443322


Q ss_pred             hhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          127 AEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .   .+..   .+.. .+...++.|+|+|||++|+||
T Consensus        76 ~---~~~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw  105 (439)
T cd07081          76 K---TCGV---LTGD-ENGGTLIIAEPIGVVASITPS  105 (439)
T ss_pred             c---cCce---ecCC-CCCceEEEEecceEEEEECCC
Confidence            1   1111   1111 234568999999999999999

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=99.72  E-value=5.1e-17  Score=134.80  Aligned_cols=107  Identities=17%  Similarity=0.020  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhh
Q 031230           50 ELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG  129 (163)
Q Consensus        50 ~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~  129 (163)
                      +.|++.|++||.     .|+++|..+|+++|.+++++|++|+++|+.+++.|+|||. ++..|+..+++.+++|+..+..
T Consensus         2 ~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~   75 (442)
T cd07084           2 ERALLAADISTK-----AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYS   75 (442)
T ss_pred             hHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHh
Confidence            578999999999     9999999999999999999999999999999999999999 6667999999999999998865


Q ss_pred             hc--cccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          130 LD--AKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       130 ~~--~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +.  +... ...........++.++|+|||++|+||
T Consensus        76 ~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~I~p~  110 (442)
T cd07084          76 YRIPHEPG-NHLGQGLKQQSHGYRWPYGPVLVIGAF  110 (442)
T ss_pred             cccccccc-ccCCCCccccceEEeecceeEEEEcCC
Confidence            42  2110 011111134578999999999999999

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=99.72  E-value=8.8e-17  Score=133.80  Aligned_cols=110  Identities=25%  Similarity=0.305  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhh
Q 031230           49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAE  128 (163)
Q Consensus        49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~  128 (163)
                      +++|++.|+++|+     .|+.+|..+|.++|.+++++|++++++|+.+++.|+|||..++..|+..+++.+++++..+.
T Consensus         1 v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~   75 (454)
T cd07129           1 VDAAAAAAAAAFE-----SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVR   75 (454)
T ss_pred             ChHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            4689999999999     99999999999999999999999999999999999999999998899999999999999876


Q ss_pred             hhc--cccccc-cC--CCCCCceeEEEEeccceEEEEccC
Q 031230          129 GLD--AKQKAP-VS--LPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       129 ~~~--~~~~~~-~~--~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +..  +..... .+  ....+...++.|+|+|||++|+||
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~  115 (454)
T cd07129          76 EGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGAS  115 (454)
T ss_pred             hcCCccccccccccccCCCCCccceEEeeccceEEEECCC
Confidence            432  221000 00  001123457899999999999999

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]

Probab=99.71  E-value=2.7e-16  Score=126.58  Aligned_cols=147  Identities=22%  Similarity=0.246  Sum_probs=127.9

Q ss_pred             CCCccceeCceEecCCCCCeeeeecCCCC-CeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 031230            7 IPSRQLFINGEWREPVLKKRIPIVNPTTE-EIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA   85 (163)
Q Consensus         7 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg-~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~   85 (163)
                      ..++++.|+|+.+..  ......++|.+. .+++.+..++..+|++||++|.+|++     .|..+|..+|.+|+.|+++
T Consensus        57 ~~evP~vIg~~~v~t--~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~-----~W~~~PiadR~aI~lkAAd  129 (561)
T KOG2455|consen   57 PLEVPLVIGDKEVYT--NDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK-----TWELVPIADRLAIFLKAAD  129 (561)
T ss_pred             ceeccEEECCeeeec--CCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC-----ccccCcHHHHHHHHHHHHH
Confidence            446799999999875  345677889875 68999999999999999999999999     9999999999999999999


Q ss_pred             HHH-HhHHHHHHHHHHHcCCCHHHHHHh-HHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEecc-ceEEEEcc
Q 031230           86 KIT-ERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPI-GVVGLITP  162 (163)
Q Consensus        86 ~l~-~~~~~la~~~~~e~Gkp~~~a~~e-v~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~-GVV~~IsP  162 (163)
                      ++. +.+-+|-...+.-.||...+|..+ +...|+++|++++.+..+.+.+.  ... ..+.....+++|+ |-|.+|+|
T Consensus       130 listkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qp--i~~-~~~t~ns~~yRpleGFVaAisP  206 (561)
T KOG2455|consen  130 LISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQP--ISQ-TKGTWNSMEYRPLEGFVAAISP  206 (561)
T ss_pred             HhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCC--ccc-cCCCCcceeeccccceeEEecc
Confidence            999 888888888999999999999875 88999999999999999887752  221 3566667888887 99999999


Q ss_pred             C
Q 031230          163 W  163 (163)
Q Consensus       163 w  163 (163)
                      |
T Consensus       207 F  207 (561)
T KOG2455|consen  207 F  207 (561)
T ss_pred             c
Confidence            7

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=99.69  E-value=2.9e-16  Score=136.66  Aligned_cols=110  Identities=18%  Similarity=0.161  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcC--CCHHHH----HHhHH
Q 031230           47 EDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLE------TIDCG--KPLEEA----VWDID  114 (163)
Q Consensus        47 ~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~------~~e~G--kp~~~a----~~ev~  114 (163)
                      ++++.++++|++||+     .|+.+|..+|.++|.++++.|++|+++|+.++      ++|+|  ||+.++    ..|+.
T Consensus       294 ~~~~~~~~aA~~A~~-----~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~  368 (718)
T PLN02418        294 VGAREMAVAARESSR-----KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIA  368 (718)
T ss_pred             HHHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHH
Confidence            359999999999999     99999999999999999999999999999996      77999  888776    35999


Q ss_pred             HHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          115 DVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       115 ~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+++.++||+.. .+..+......... .+...++.|+|+|||++|+||
T Consensus       369 ~~~~~~~~~a~~-~~~~g~~~~~~~~~-~~~~~~~~r~PlGVV~~I~Pw  415 (718)
T PLN02418        369 SLAASIRQLADM-EDPIGRVLKRTEVA-DGLVLEKTSCPLGVLLIIFES  415 (718)
T ss_pred             HHHHHHHHHhcC-ccccCccccccccC-CCceEEEEEEeeeEEEEEeCC
Confidence            999999999998 33444321000011 244478999999999999999

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=99.69  E-value=2.5e-16  Score=130.19  Aligned_cols=105  Identities=26%  Similarity=0.261  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHH
Q 031230           46 AEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYAD  125 (163)
Q Consensus        46 ~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~  125 (163)
                      -+|++.|++.|++||+     .|+.++..+|.++|.+++++|++|+++|+++++.|+|||..++.      ++.+++++.
T Consensus         3 ~~~v~~av~~A~~A~~-----~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~   71 (429)
T cd07121           3 FATVDDAVAAAKAAQK-----QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAE   71 (429)
T ss_pred             hhhHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHH
Confidence            4789999999999999     99999999999999999999999999999999999999987764      455666665


Q ss_pred             hhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          126 LAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ........  .+......+...++.|+|+|||++|+||
T Consensus        72 ~~~~~~~~--~~~~~~~~~~~~~~~~~PlGVV~~I~Pw  107 (429)
T cd07121          72 KTPGTEDL--TTTAWSGDNGLTLVEYAPFGVIGAITPS  107 (429)
T ss_pred             hcCccccc--ccccccCCCcceEEEEcccceEEEEccC
Confidence            33211100  0010111233568899999999999999

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=99.68  E-value=1.1e-16  Score=125.36  Aligned_cols=141  Identities=22%  Similarity=0.435  Sum_probs=127.7

Q ss_pred             eeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230           13 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKS   92 (163)
Q Consensus        13 ~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~   92 (163)
                      ..+|+|..  ++..++..+|++.++|+++..++.+|.+.+++.|++|++     .|-..|...|.++.+.+-|.|+...+
T Consensus        23 vy~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k-----iw~~vpapkrgeivrqigdalr~klq   95 (507)
T KOG2453|consen   23 VYHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK-----IWCEVPAPKRGEIVRQIGDALRTKLQ   95 (507)
T ss_pred             eeeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH-----HHhcCCCCccchHHHHHHHHHHHHHH
Confidence            45668954  678899999999999999999999999999999999999     99999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           93 ELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        93 ~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .|-.++++|+||-+.+...||...++.++|...+.+.+.+..   .|...++....-+..|+|+|++|+.|
T Consensus        96 ~lg~lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i---~pserpghalleqwnplg~vgvitaf  163 (507)
T KOG2453|consen   96 NLGKLVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKI---FPSERPGHALLEQWNPLGVVGVITAF  163 (507)
T ss_pred             HHhhhhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcc---cCCCCCchhHHHhcCCcceEEEEEec
Confidence            999999999999999999999999999999999999998885   44443455566788999999999865

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=99.67  E-value=2.1e-16  Score=129.40  Aligned_cols=101  Identities=18%  Similarity=0.126  Sum_probs=84.3

Q ss_pred             HHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCH------HHHHHhHHHHHHHHHHH
Q 031230           56 ARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANL------ETIDCGKPL------EEAVWDIDDVAGCFEYY  123 (163)
Q Consensus        56 a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~------~~~e~Gkp~------~~a~~ev~~~i~~l~~~  123 (163)
                      |++||.     .|+++|..+|.++|.+++++|++|+++|+.+      ++.|+|||.      .++..|+..+++.++++
T Consensus         1 a~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~   75 (398)
T TIGR00407         1 AKQAAN-----ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDV   75 (398)
T ss_pred             ChhHHH-----HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            578999     9999999999999999999999999999999      999999994      34567999999999999


Q ss_pred             HHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          124 ADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +..++.+ +.. .+......+...++.|+|+|||++|+||
T Consensus        76 a~~a~~~-g~~-~~~~~~~~~~~~~~~~~PlGVV~~I~pw  113 (398)
T TIGR00407        76 IELADPV-GKV-IDGRELDSGLTLERVRVPLGVLGVIYEA  113 (398)
T ss_pred             hcCCCCC-ccc-ccceecCCCceEEEEEeCcEEEEEEeCC
Confidence            9988764 432 1111111355678999999999999999

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=99.67  E-value=6.4e-16  Score=128.88  Aligned_cols=108  Identities=25%  Similarity=0.260  Sum_probs=85.1

Q ss_pred             CCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHH
Q 031230           43 AATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY  122 (163)
Q Consensus        43 ~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~  122 (163)
                      ....+|++++++.|++||.     .|+.++..+|.++|.+++++|++|+++|+++++.|+|||..++..      +.+++
T Consensus        32 ~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~  100 (465)
T PRK15398         32 MGVFASVDDAVAAAKVAQQ-----RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI------AKNVA  100 (465)
T ss_pred             ccHHHHHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH------HHHHH
Confidence            3567899999999999999     999999999999999999999999999999999999999988763      33556


Q ss_pred             HHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++.........  .......+...++.|+|+|||++|+||
T Consensus       101 ~~~~~~~~~~~~--~~~~~~~~~~~~v~~~P~GVV~~I~Pw  139 (465)
T PRK15398        101 AAEKTPGVEDLT--TEALTGDNGLTLIEYAPFGVIGAVTPS  139 (465)
T ss_pred             HHHHhccccccc--cCcccCCCceeEEEecccEEEEEeeCC
Confidence            665542111110  001111234578999999999999999

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=99.67  E-value=7.7e-16  Score=136.70  Aligned_cols=113  Identities=18%  Similarity=0.238  Sum_probs=90.2

Q ss_pred             EecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHH
Q 031230           40 DIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAG  118 (163)
Q Consensus        40 ~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~  118 (163)
                      .....+.+|+++++++|++||+     .|+++|.++|.++|.+++++|++++++|+++++.|+|||..++.. ++..++.
T Consensus         5 ~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~   79 (862)
T PRK13805          5 EMAVTNVAELDALVEKAKKAQE-----EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASE   79 (862)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHH
Confidence            3456889999999999999999     999999999999999999999999999999999999999988875 5555555


Q ss_pred             HHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          119 CFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       119 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+.+++. ..+..+.    .... .....++.|+|+|||++|+||
T Consensus        80 ~~~~~~~-~~~~~g~----~~~~-~~~~~~~~~~P~GVv~~I~pw  118 (862)
T PRK13805         80 YIYNSYK-DEKTVGV----IEED-DEFGIIEIAEPVGVIAGITPT  118 (862)
T ss_pred             HHHHHhc-CCCcccc----cCcC-CCCCeEEEeecceEEEEEeCC
Confidence            5544433 1222221    1111 244578999999999999999

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=99.66  E-value=5.6e-16  Score=127.73  Aligned_cols=109  Identities=20%  Similarity=0.207  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HhH
Q 031230           46 AEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE----EAV--------WDI  113 (163)
Q Consensus        46 ~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~----~a~--------~ev  113 (163)
                      .+|++.+++.|++||.     .|+.+|..+|.++|.+++++|++|+++|+.++..|+||+..    ++.        .|+
T Consensus         3 ~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev   77 (417)
T PRK00197          3 MEYLEELGRRAKAASR-----KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARI   77 (417)
T ss_pred             hhHHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHH
Confidence            3689999999999999     99999999999999999999999999999999988877753    443        588


Q ss_pred             HHHHHHHHHHHHhhhhhccccccccCC--CCCCceeEEEEeccceEEEEccC
Q 031230          114 DDVAGCFEYYADLAEGLDAKQKAPVSL--PMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       114 ~~~i~~l~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ..+++.+++++.+.+.. +..   .+.  ...+...++.|+|+|||++|+||
T Consensus        78 ~~~~~~~~~~a~~~~~~-g~~---~~~~~~~~~~~~~~~~~PlGVv~~I~p~  125 (417)
T PRK00197         78 EGIAEGLRQVAALPDPV-GEV---LDGWTLPNGLRIGRVRVPLGVIGVIYES  125 (417)
T ss_pred             HHHHHHHHHHhhcCCCc-ccc---ccceecCCCceEEEEecCceEEEEEcCC
Confidence            99999999999877643 331   111  11233578999999999999998

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=99.65  E-value=2.5e-15  Score=126.02  Aligned_cols=110  Identities=17%  Similarity=0.077  Sum_probs=89.1

Q ss_pred             CCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHH
Q 031230           43 AATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFE  121 (163)
Q Consensus        43 ~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~  121 (163)
                      ..+.++++.+++.|++||+     .|+.++.++|.++|.+++++|.+++++|++++..|+|||..+... +.......+.
T Consensus         4 ~~~~~~v~~av~~A~~A~~-----~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~   78 (488)
T TIGR02518         4 LYSIQQVRNLIRSAKVAQK-----KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVY   78 (488)
T ss_pred             ccCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Confidence            4578899999999999999     999999999999999999999999999999999999999887654 3444666666


Q ss_pred             HHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          122 YYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++...... +..    ... .+...+..|+|+|||++|+||
T Consensus        79 ~~~~~~~~~-G~~----~~~-~~~~~~~~~~PlGVV~~I~P~  114 (488)
T TIGR02518        79 DSIKDMKTI-GIL----SED-KEKKVIEIAVPVGVVAGLIPS  114 (488)
T ss_pred             HHHhhCccc-cee----cCC-CCcceEEEEecceEEEEEccc
Confidence            666533322 321    111 345578899999999999999

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=99.63  E-value=4.2e-15  Score=122.76  Aligned_cols=106  Identities=44%  Similarity=0.691  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhh
Q 031230           50 ELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG  129 (163)
Q Consensus        50 ~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~  129 (163)
                      +++++.|+++|.     .|+.++.++|.++|.++++.|.+++++|+.+++.|+|||..++..|+..+++.+++++..+++
T Consensus         1 ~~av~~a~~a~~-----~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~   75 (432)
T cd07078           1 DAAVAAARAAFK-----AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARR   75 (432)
T ss_pred             CHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            368899999999     999999999999999999999999999999999999999988888999999999999999888


Q ss_pred             hccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +.+...   .....+...++.++|+|||++|+||
T Consensus        76 ~~~~~~---~~~~~~~~~~~~~~P~Gvv~~i~p~  106 (432)
T cd07078          76 LHGEVI---PSPDPGELAIVRREPLGVVGAITPW  106 (432)
T ss_pred             hcCccc---cccCCCceEEEEEeecceEEEECCC
Confidence            876632   1112356688999999999999998

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=99.63  E-value=8.9e-15  Score=117.01  Aligned_cols=110  Identities=26%  Similarity=0.302  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhh
Q 031230           49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLA  127 (163)
Q Consensus        49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~  127 (163)
                      +.+.++.+|.+|.     +.+..|.+.|.++|.++..++++|.++|.+++..|.+||..++.. |+...++.++|+..++
T Consensus         4 ~~~~v~~~R~~F~-----sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L   78 (477)
T KOG2456|consen    4 ISETVRRLRLAFS-----SGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENL   78 (477)
T ss_pred             HHHHHHHHHHHHh-----cCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhh
Confidence            4566899999999     779999999999999999999999999999999999999999975 9999999999999999


Q ss_pred             hhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          128 EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|..+..++.+......+.++..+|+|||++|+||
T Consensus        79 ~~wv~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~w  114 (477)
T KOG2456|consen   79 PEWVKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPW  114 (477)
T ss_pred             HHhccccccCcccccccCceeEEecCCceEEEEccC
Confidence            999988765544444467789999999999999999

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=99.61  E-value=8.2e-15  Score=118.76  Aligned_cols=101  Identities=45%  Similarity=0.731  Sum_probs=90.3

Q ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhcccc
Q 031230           55 AARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQ  134 (163)
Q Consensus        55 ~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~  134 (163)
                      .|+++|.     .|+.++.++|.++|.++++.|.+++++|+++++.|+|||..++..|+..+++.++++++.+.++.+..
T Consensus         2 ~a~~a~~-----~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~   76 (367)
T cd06534           2 AARAAFK-----AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPE   76 (367)
T ss_pred             hHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            5789999     99999999999999999999999999999999999999999999999999999999999998887632


Q ss_pred             ccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          135 KAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       135 ~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                         .+....+...++.++|+|||++|+||
T Consensus        77 ---~~~~~~~~~~~~~~~p~Gvv~~i~p~  102 (367)
T cd06534          77 ---LPSPDPGGEAYVRREPLGVVGVITPW  102 (367)
T ss_pred             ---ccccCCCceeEEEEEeeeEEEEECCC
Confidence               22222456688999999999999998

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=99.59  E-value=5.1e-15  Score=121.69  Aligned_cols=106  Identities=20%  Similarity=0.184  Sum_probs=83.2

Q ss_pred             HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HhHHHHHH
Q 031230           51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE----EAV--------WDIDDVAG  118 (163)
Q Consensus        51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~----~a~--------~ev~~~i~  118 (163)
                      ..++.|+++|.     .|+.+|.++|.++|.+++++|++|+++|+.+++.|+||+..    ++.        .|+..+++
T Consensus         2 ~~~~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~   76 (406)
T cd07079           2 ELAKRAKAASR-----ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAE   76 (406)
T ss_pred             hHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHH
Confidence            46789999999     99999999999999999999999999999999777776643    332        48999999


Q ss_pred             HHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          119 CFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       119 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+++++...+. .+.. .+......+...++.|+|+|||++|+||
T Consensus        77 ~~~~~a~~~~~-~g~~-~~~~~~~~~~~~~~~~~PlGVV~~I~p~  119 (406)
T cd07079          77 GLRQVAALPDP-VGEV-LRGWTLPNGLQIEKVRVPLGVIGIIYES  119 (406)
T ss_pred             HHHHHHhcCCC-Cccc-ccceeccCccceeEEecceEEEEEecCC
Confidence            99999987543 2331 0110001234568999999999999997

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=99.58  E-value=6.9e-15  Score=120.58  Aligned_cols=98  Identities=18%  Similarity=0.177  Sum_probs=83.0

Q ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-----------HhHHHHHHHHHHH
Q 031230           55 AARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-----------WDIDDVAGCFEYY  123 (163)
Q Consensus        55 ~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-----------~ev~~~i~~l~~~  123 (163)
                      +|++||+     .|+.+|..+|.++|.+++++|++|+++|++++..|+|||+.+..           .|+..+++.++++
T Consensus         2 ~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~   76 (397)
T cd07077           2 SAKNAQR-----TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGI   76 (397)
T ss_pred             hHHHHHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHH
Confidence            6889999     99999999999999999999999999999999999999965432           3899999999999


Q ss_pred             HHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          124 ADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +....+..+..   .+   .....++.|+|+|||++|+||
T Consensus        77 a~~~~~~~~~~---~~---~~~~~~~~~~P~Gvv~~i~p~  110 (397)
T cd07077          77 TASVGHIQDVL---LP---DNGETYVRAFPIGVTMHILPS  110 (397)
T ss_pred             HHhcCcccceE---ec---CCCceEEEEecceEEEEEeCC
Confidence            98765554432   11   133578999999999999999

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=99.52  E-value=1.4e-13  Score=120.00  Aligned_cols=105  Identities=19%  Similarity=0.162  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH----------------
Q 031230           48 DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW----------------  111 (163)
Q Consensus        48 ~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~----------------  111 (163)
                      ++...+++|++||+     .|+.+|..+|.++|.+++++|++|+++|+    .|+||++.++..                
T Consensus       287 ~~~~~~~~A~~A~~-----~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~  357 (715)
T TIGR01092       287 GERDMAVAARESSR-----MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPS  357 (715)
T ss_pred             HHHHHHHHHHHHHH-----hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHH
Confidence            47888999999999     99999999999999999999999999997    488888876654                


Q ss_pred             hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          112 DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       112 ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+..+++.++++++. .+..+....+.... .+...++.|+|+|||++|+||
T Consensus       358 ei~~~~~~l~~~a~~-~~~~g~~~~~~~~~-~~~~~~~~~~P~GVV~~I~Pw  407 (715)
T TIGR01092       358 KISSLAISLRQLAAM-EDPIGRVLKRTRIA-DNLILEKTSVPIGVLLIVFES  407 (715)
T ss_pred             HHHHHHHHHHHHhcC-CCcccccccccccC-CCceeEEEEeeceEEEEEeCC
Confidence            477788888888873 33222210000011 233467899999999999999

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=99.48  E-value=2.3e-13  Score=111.98  Aligned_cols=81  Identities=30%  Similarity=0.393  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEE
Q 031230           80 LRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGL  159 (163)
Q Consensus        80 L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~  159 (163)
                      |.+++++|++|+++|+++++.|+|||..++..||..+++.++|++.++..+.+..   .+....+...++.|+|+|||++
T Consensus         1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~   77 (409)
T PRK10090          1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEI---IQSDRPGENILLFKRALGVTTG   77 (409)
T ss_pred             CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cCCCCCCceeEEEEecccEEEE
Confidence            5789999999999999999999999999999999999999999999988776542   1111124467899999999999


Q ss_pred             EccC
Q 031230          160 ITPW  163 (163)
Q Consensus       160 IsPw  163 (163)
                      |+||
T Consensus        78 i~p~   81 (409)
T PRK10090         78 ILPW   81 (409)
T ss_pred             ECCC
Confidence            9999

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=98.05  E-value=7e-05  Score=60.90  Aligned_cols=107  Identities=18%  Similarity=0.215  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcCCCHHH------HHHhHH
Q 031230           47 EDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLE------TIDCGKPLEE------AVWDID  114 (163)
Q Consensus        47 ~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~------~~e~Gkp~~~------a~~ev~  114 (163)
                      .++.+..+.|++|+.     ....++..+|-+.|.++++.|++++++|..+-      .++.|.+...      ....+.
T Consensus         3 ~~~~~~~~~Ak~A~~-----~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~   77 (417)
T COG0014           3 SELEELGKRAKAASR-----KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIE   77 (417)
T ss_pred             hHHHHHHHHHHHHHH-----HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHH
Confidence            467778889999999     89999999999999999999999999997763      4445544211      112455


Q ss_pred             HHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEE
Q 031230          115 DVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLI  160 (163)
Q Consensus       115 ~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I  160 (163)
                      .+++-++..+...+-+..-.  .......+...+-.|.|+||+++|
T Consensus        78 ~ma~gl~~Va~L~DPvGev~--~~~~~~nGL~i~~~rvPLGVigvI  121 (417)
T COG0014          78 AMADGLRQVAALPDPVGEVI--DGWTLPNGLQIYRVRVPLGVIGVI  121 (417)
T ss_pred             HHHHHHHHHhcCCCchHhhh--ccccCCCCCEEEEEEccceEEEEE
Confidence            56666666666544332221  011111467789999999999998

>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=97.48  E-value=0.0012  Score=52.58  Aligned_cols=103  Identities=24%  Similarity=0.268  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCHHHHH--------HhHH
Q 031230           49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANL------ETIDCGKPLEEAV--------WDID  114 (163)
Q Consensus        49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~------~~~e~Gkp~~~a~--------~ev~  114 (163)
                      +++..+.||++++     ....++.++|.++|.+++++|+.+..+|..+      .+.|.|.  .++.        .-+.
T Consensus         2 ~e~~a~~aR~a~r-----~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL--~~sll~RL~l~~~K~~   74 (433)
T KOG4165|consen    2 VEEMAENAREAGR-----ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGL--AESLLKRLDLSPGKIS   74 (433)
T ss_pred             HHHHHHHHHHHhh-----HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCc--cHHHHHHhcCChHHHH
Confidence            3556778999999     8999999999999999999999998887654      3455663  2221        1233


Q ss_pred             HHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEE
Q 031230          115 DVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLI  160 (163)
Q Consensus       115 ~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I  160 (163)
                      .....++..+. .....|......... .+..-+-.-.|+||-++|
T Consensus        75 sl~~g~~~ia~-~edpvGRVl~~~~la-dgL~L~qvt~PiGvLLVI  118 (433)
T KOG4165|consen   75 SLAAGLRQIAE-LEDPVGRVLKKTRLA-DGLELEQVTVPIGVLLVI  118 (433)
T ss_pred             HHHHHHHHHHh-cccchhhheeeeecc-CCceEEEeeccceEEEEE
Confidence            33344444444 222222211111222 455667788999999988

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=97.44  E-value=0.00032  Score=58.28  Aligned_cols=93  Identities=14%  Similarity=0.031  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH---HHHHcCCCHHHHHHhHHHHHHHHHHHHHh
Q 031230           50 ELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANL---ETIDCGKPLEEAVWDIDDVAGCFEYYADL  126 (163)
Q Consensus        50 ~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~---~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~  126 (163)
                      ++.++..+++++     .|..-+...|...|.++...+..+.+.+...   +.....|+..+...+-     .+. ....
T Consensus        27 ~~iv~~l~~~~~-----~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l~~~l~~-----el~-~~~~   95 (422)
T cd07080          27 EEIVDFLDRAGK-----RLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENLERILER-----ELG-SPGI   95 (422)
T ss_pred             HHHHHHHHHHHH-----HhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHHHHHHHH-----hcC-Cccc
Confidence            334444445555     5555555556666666655555555555555   4444444332222110     010 0111


Q ss_pred             hhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          127 AEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|..          .+...+++++|+|||+.|+||
T Consensus        96 Ld~w~~----------~~~~~~~~~~P~Gvv~~I~p~  122 (422)
T cd07080          96 LDEWVP----------PGRGGYIRAQPRGLVVHIIAG  122 (422)
T ss_pred             ccCCcc----------CCCCCeeEEcCCceEEEEccC
Confidence            111111          144568999999999999998

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	163
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		1e-72
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		3e-68
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		2e-64
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		2e-59
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		2e-59
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		2e-56
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		1e-26
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		6e-23
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		6e-23
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		7e-23
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		7e-23
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		7e-23
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		7e-23
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		7e-23
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		7e-23
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		7e-23
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		1e-21
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		4e-20
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		2e-18
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		2e-16
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-15
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-15
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		3e-15
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		4e-15
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		4e-15
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		2e-14
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		2e-14
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		3e-14
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		5e-13
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		7e-13
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		2e-12
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		4e-12
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		8e-12
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		1e-11
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		2e-11
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		1e-10
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		2e-10
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		4e-10
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		4e-10
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		4e-10
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		4e-10
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		4e-10
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		5e-10
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		6e-10
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		6e-10
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		1e-09
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		1e-09
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		3e-09
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		9e-09
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		3e-08
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		3e-08
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		1e-07
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		1e-07
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		2e-07
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		1e-06
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		1e-06
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		2e-06
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		3e-06
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		2e-05
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		2e-05
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		2e-05
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		2e-05
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		4e-04
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		6e-04

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score =  268 bits (684), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 124/161 (77%), Positives = 146/161 (90%)
Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           M IPIP+RQLFING+W+ PVL KRIP++NP T+ I+GDIPAAT EDV++AV AA+ AL+R
Sbjct: 1   MDIPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTR 60
Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKG DW++ASGA RA+YLRAIAAK+TE+K ELA LE+IDCGKPL+EA WDIDDVAGCFEY
Sbjct: 61  NKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEY 120
Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAE LDA+QKAPVSLPM+ FKS+VL+EPIGVVGLITPW
Sbjct: 121 YADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPW 161

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score =  253 bits (646), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 118/161 (73%), Positives = 140/161 (86%)
Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MAI + SRQLFI+GEWR P+L KRIP +NP+TE I+GDIPAAT EDV+LAVDAA++A+SR
Sbjct: 1   MAITVSSRQLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISR 60
Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
             G+DWS+ASG+ RA+YLRAIAAKI E+K EL  LE+IDCGKPLEEA+ D+DDV  CFEY
Sbjct: 61  KNGRDWSAASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEALADLDDVVACFEY 120
Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YA LAE LD+KQKAP+SLPM+ FKSY+LKEPIGVV LITPW
Sbjct: 121 YAGLAEELDSKQKAPISLPMDTFKSYILKEPIGVVALITPW 161

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score =  241 bits (614), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/161 (71%), Positives = 135/161 (83%), Gaps = 3/161 (1%)
Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           MA PIP+RQLFI+GEWREP+ K RIP++NP+TEEI+GDIPAATAEDVE+AV AAR+A  R
Sbjct: 1   MAFPIPARQLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRR 60
Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           N   +WS+ SGA RA YLRAIAAKITE+K     LETID GKP +EAV DIDDVA CFEY
Sbjct: 61  N---NWSATSGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEY 117
Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           +A  AE LD KQKAPV+LPME FKS+VL++P+GVVGLI+PW
Sbjct: 118 FAGQAEALDGKQKAPVTLPMERFKSHVLRQPLGVVGLISPW 158

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score =  224 bits (571), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 107/159 (67%), Positives = 134/159 (84%), Gaps = 3/159 (1%)
Query: 5   IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNK 64
           +PIP RQL+I GEWREPV K RIPI+NP TEEI+GDIPAATAEDV++AV+AAR+A++R+ 
Sbjct: 19  VPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARD- 77
Query: 65  GKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYA 124
             DW S +GA RAKYLRAIAAK+ E+KS LA LE++D GK L E+  D+DDVAGCFEYYA
Sbjct: 78  --DWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYA 135
Query: 125 DLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            LAE LD+++  PV+L  +++KSYVL+EP+GVVGLITPW
Sbjct: 136 GLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPW 174

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score =  224 bits (571), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 107/159 (67%), Positives = 134/159 (84%), Gaps = 3/159 (1%)
Query: 5   IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNK 64
           +PIP RQL+I GEWREPV K RIPI+NP TEEI+GDIPAATAEDV++AV+AAR+A++R+ 
Sbjct: 19  VPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARD- 77
Query: 65  GKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYA 124
             DW S +GA RAKYLRAIAAK+ E+KS LA LE++D GK L E+  D+DDVAGCFEYYA
Sbjct: 78  --DWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYA 135
Query: 125 DLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            LAE LD+++  PV+L  +++KSYVL+EP+GVVGLITPW
Sbjct: 136 GLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPW 174

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score =  214 bits (545), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 107/157 (68%), Positives = 129/157 (82%)
Query: 7   IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGK 66
           +P RQLF++GEWR P   +R+P+VNPTTE  +G+IPA TAEDV+ AV AAR AL RN+G+
Sbjct: 22  VPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGR 81
Query: 67  DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADL 126
           DW+ A GA RAKYLRAIAAK+ ERK ELA LE +DCGKP +EA WD+DDVAGCFEY+AD 
Sbjct: 82  DWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQ 141
Query: 127 AEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           AE LD +Q +PVSLPME FK ++ +EPIGVVGLITPW
Sbjct: 142 AEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPW 178

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 90/155 (58%), Gaps = 6/155 (3%)
Query: 9   SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDW 68
           S++ +I+GEW E   K    I+NP  +E++  +   T ED E A+ AAR+A       +W
Sbjct: 32  SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG---EW 88
Query: 69  SSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAE 128
           S  +   R K +RAIA KI E +  LA LET+D GK LEE+  D+DD+   F Y+A LA 
Sbjct: 89  SQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLA- 147
Query: 129 GLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             D      +  P+ + +S ++KEP+GVV  ITPW
Sbjct: 148 --DKDGGEMIDSPIPDTESKIVKEPVGVVTQITPW 180

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score =  103 bits (256), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 4   AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
           A+P P++Q       +FIN EW + V +K  P VNP+T E++  +     EDV+ AV AA
Sbjct: 1   AVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAA 60
Query: 57  RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDD 115
           R A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D 
Sbjct: 61  RAAFQL--GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 118
Query: 116 VAGCFEYYADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           V  C  YYA  A+    K     ++P++ +F SY   EP+GV G I PW
Sbjct: 119 VLKCLRYYAGWADKYHGK-----TIPIDGDFFSYTRHEPVGVCGQIIPW 162

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  103 bits (256), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 4   AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
           A+P P++Q       +FIN EW + V +K  P VNP+T E++  +     EDV+ AV AA
Sbjct: 7   AVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAA 66
Query: 57  RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDD 115
           R A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D 
Sbjct: 67  RAAFQL--GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 124
Query: 116 VAGCFEYYADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           V  C  YYA  A+    K     ++P++ +F SY   EP+GV G I PW
Sbjct: 125 VLKCLRYYAGWADKYHGK-----TIPIDGDFFSYTRHEPVGVCGQIIPW 168

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 4   AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
           A+P P++Q       +FIN EW + V +K  P VNP+T E++  +     EDV+ AV AA
Sbjct: 7   AVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAA 66
Query: 57  RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDD 115
           R A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D 
Sbjct: 67  RAAFQL--GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 124
Query: 116 VAGCFEYYADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           V  C  YYA  A+    K     ++P++ +F SY   EP+GV G I PW
Sbjct: 125 VLKCLRYYAGWADKYHGK-----TIPIDGDFFSYTRHEPVGVCGQIIPW 168

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 4   AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
           A+P P++Q       +FIN EW + V +K  P VNP+T E++  +     EDV+ AV AA
Sbjct: 7   AVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAA 66
Query: 57  RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDD 115
           R A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D 
Sbjct: 67  RAAFQL--GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 124
Query: 116 VAGCFEYYADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           V  C  YYA  A+    K     ++P++ +F SY   EP+GV G I PW
Sbjct: 125 VLKCLRYYAGWADKYHGK-----TIPIDGDFFSYTRHEPVGVCGQIIPW 168

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 4   AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
           A+P P++Q       +FIN EW + V +K  P VNP+T E++  +     EDV+ AV AA
Sbjct: 7   AVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAA 66
Query: 57  RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDD 115
           R A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D 
Sbjct: 67  RAAFQL--GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 124
Query: 116 VAGCFEYYADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           V  C  YYA  A+    K     ++P++ +F SY   EP+GV G I PW
Sbjct: 125 VLKCLRYYAGWADKYHGK-----TIPIDGDFFSYTRHEPVGVCGQIIPW 168

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 4   AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
           A+P P++Q       +FIN EW + V +K  P VNP+T E++  +     EDV+ AV AA
Sbjct: 7   AVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAA 66
Query: 57  RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDD 115
           R A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D 
Sbjct: 67  RAAFQL--GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 124
Query: 116 VAGCFEYYADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           V  C  YYA  A+    K     ++P++ +F SY   EP+GV G I PW
Sbjct: 125 VLKCLRYYAGWADKYHGK-----TIPIDGDFFSYTRHEPVGVCGQIIPW 168

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 4   AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
           A+P P++Q       +FIN EW + V +K  P VNP+T E++  +     EDV+ AV AA
Sbjct: 7   AVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAA 66
Query: 57  RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDD 115
           R A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D 
Sbjct: 67  RAAFQL--GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 124
Query: 116 VAGCFEYYADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           V  C  YYA  A+    K     ++P++ +F SY   EP+GV G I PW
Sbjct: 125 VLKCLRYYAGWADKYHGK-----TIPIDGDFFSYTRHEPVGVCGQIIPW 168

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 4   AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
           A+P P++Q       +FIN EW + V +K  P VNP+T E++  +     EDV+ AV AA
Sbjct: 7   AVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAA 66
Query: 57  RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDD 115
           R A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D 
Sbjct: 67  RAAFQL--GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 124
Query: 116 VAGCFEYYADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           V  C  YYA  A+    K     ++P++ +F SY   EP+GV G I PW
Sbjct: 125 VLKCLRYYAGWADKYHGK-----TIPIDGDFFSYTRHEPVGVCGQIIPW 168

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 4   AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
           A+P P++Q       +FIN EW + V +K  P VNP+T E++  +     EDV+ AV AA
Sbjct: 7   AVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAA 66
Query: 57  RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDD 115
           R A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D 
Sbjct: 67  RAAFQL--GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 124
Query: 116 VAGCFEYYADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           V  C  YYA  A+    K     ++P++ +F SY   EP+GV G I PW
Sbjct: 125 VLKCLRYYAGWADKYHGK-----TIPIDGDFFSYTRHEPVGVCGQIIPW 168

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 4   AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
           A+P P++Q       +FIN EW + V KK  P VNP+T +++  +      DV+ AV AA
Sbjct: 6   AVPTPNQQPEVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAA 65
Query: 57  RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDD 115
           R A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D 
Sbjct: 66  RAAFQL--GSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDM 123
Query: 116 VAGCFEYYADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           V  C  YYA  A+    K     ++P++ ++ SY   EP+GV G I PW
Sbjct: 124 VLKCLRYYAGWADKYHGK-----TIPIDGDYFSYTRHEPVGVCGQIIPW 167

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score = 94.0 bits (232), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 5   IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNK 64
           I I   +LFIN EW E V  K  P+ NP TEE + ++  A  EDV+ AV AAR+A     
Sbjct: 16  IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQM-- 73
Query: 65  GKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYY 123
           G  W +   + R + +  +A  I   +  LA LE+I+ GK    A + D+D       Y 
Sbjct: 74  GSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYC 133
Query: 124 ADLAEGLDAKQKAPVSLPMEN-FKSYVLKEPIGVVGLITPW 163
           A  A+ +  +     ++P++  F SY   EPIGV GLI PW
Sbjct: 134 AGWADKIQGR-----TIPVDGEFFSYTRHEPIGVCGLIFPW 169

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 13/157 (8%)
Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           ++FIN EW   V  K+ P+ NP TEE + ++     EDV+ AV AARQA     G  W +
Sbjct: 22  KIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAF--QIGSPWRT 79
Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGC---FEYYADLA 127
              + R + L  +A  I   +  LA +E ++ GK    A   + D+ GC     Y A  A
Sbjct: 80  MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAY--LMDLGGCIKTLRYCAGWA 137
Query: 128 EGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           + +  +     ++PM+ NF +Y   EP+GV G I PW
Sbjct: 138 DKIQGR-----TIPMDGNFFTYTRSEPVGVCGQIIPW 169

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 5   IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNK 64
           + I   ++FIN EW+     +  P+ NP T E V ++  A   D++ AV AAR A S   
Sbjct: 14  LEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSL-- 71
Query: 65  GKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYY 123
           G  W     + R + L  +A  +   ++ LA +E+++ GKP  +A + D+  V     YY
Sbjct: 72  GSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYY 131
Query: 124 ADLAEGLDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           A  A+ +       +++P++ ++ ++   EPIGV G I PW
Sbjct: 132 AGWADKIHG-----MTIPVDGDYFTFTRHEPIGVCGQIIPW 167

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
           ++L+I G + E         +NP   E++  +  A+ EDVE AV +A +       K W+
Sbjct: 7   QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQ-----KVWA 61
Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAE 128
           + +   R++ LR     + ER  ELA LET+D GKPL E    DI   A   EYYA L  
Sbjct: 62  AMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVP 121
Query: 129 GLDAKQKAPVSLPM-ENFKSYVLKEPIGVVGLITPW 163
            ++ +Q     +P+ E    Y  +EP+GVV  I  W
Sbjct: 122 AIEGEQ-----IPLRETSFVYTRREPLGVVAGIGAW 152

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
           ++L+I G + E         +NP   E++  +  A+ EDVE AV +A +       K W+
Sbjct: 6   QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQ-----KVWA 60
Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAE 128
           + +   R++ LR     + ER  ELA LET+D GKPL E    DI   A   EYYA L  
Sbjct: 61  AMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVP 120
Query: 129 GLDAKQKAPVSLPM-ENFKSYVLKEPIGVVGLITPW 163
            ++ +Q     +P+ E    Y  +EP+GVV  I  W
Sbjct: 121 AIEGEQ-----IPLRETSFVYTRREPLGVVAGIGAW 151

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
           ++L+I G + E         +NP   E++  +  A+ EDVE AV +A +       K W+
Sbjct: 6   QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQ-----KVWA 60
Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAE 128
           + +   R++ LR     + ER  ELA LET+D GKPL E    DI   A   EYYA L  
Sbjct: 61  AMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVP 120
Query: 129 GLDAKQKAPVSLPM-ENFKSYVLKEPIGVVGLITPW 163
            ++ +Q     +P+ E    Y  +EP+GVV  I  W
Sbjct: 121 AIEGEQ-----IPLRETSFVYTRREPLGVVAGIGAW 151

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
           ++L+I G + E         +NP   E++  +  A+ EDVE AV +A +       K W+
Sbjct: 7   QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQ-----KVWA 61
Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAE 128
           + +   R++ LR     + ER  ELA LET+D GKPL E    DI   A   EYYA L  
Sbjct: 62  AMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVP 121
Query: 129 GLDAKQKAPVSLPM-ENFKSYVLKEPIGVVGLITPW 163
            ++ +Q     +P+ E    Y  +EP+GVV  I  W
Sbjct: 122 AIEGEQ-----IPLRETSFVYTRREPLGVVAGIGAW 152

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
           ++L+I G + E         +NP   E++  +  A+ EDVE AV +A +       K W+
Sbjct: 7   QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQ-----KVWA 61
Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAE 128
           + +   R++ LR     + ER  ELA LET+D GKPL E    DI   A   EYYA L  
Sbjct: 62  AMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVP 121
Query: 129 GLDAKQKAPVSLPM-ENFKSYVLKEPIGVVGLITPW 163
            ++ +Q     +P+ E    Y  +EP+GVV  I  W
Sbjct: 122 AIEGEQ-----IPLRETSFVYTRREPLGVVAGIGAW 152

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
           +Q  INGEW +    + I + NP   + +G +P   A++   A+DAA +AL       W 
Sbjct: 10  QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA-----WR 64
Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129
           + +   RA  LR     + E + +LA L T++ GKPL EA  +I   A   E++A+    
Sbjct: 65  ALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE---- 120
Query: 130 LDAKQKAPVSLPME--NFKSYVLKEPIGVVGLITPW 163
            + K+    ++P    + +  V+K+PIGV   ITPW
Sbjct: 121 -EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPW 155

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
           +Q  INGEW +    + I + NP   + +G +P   A++   A+DAA +AL       W 
Sbjct: 10  QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA-----WR 64
Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129
           + +   RA  LR     + E + +LA L T++ GKPL EA  +I   A   E++A+    
Sbjct: 65  ALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE---- 120
Query: 130 LDAKQKAPVSLPME--NFKSYVLKEPIGVVGLITPW 163
            + K+    ++P    + +  V+K+PIGV   ITPW
Sbjct: 121 -EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPW 155

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 28  PIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI 87
           P+  P T  ++  +    AE+V+ AV +A+ A  +     WS  +G  R++ +   A  I
Sbjct: 39  PVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK-----WSKMAGIERSRVMLEAARII 93
Query: 88  TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS 147
            ER+  +A LE I+ GK + EA +DID    C EYYA LA  L  +    + LP   F +
Sbjct: 94  RERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQH---IQLPGGAF-A 149
Query: 148 YVLKEPIGVVGLITPW 163
           Y  +EP+GV   I  W
Sbjct: 150 YTRREPLGVCAGILAW 165

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           +INGEW E    +   +VNP T+E++  +P +T ED++ A   A +A      K WS  +
Sbjct: 9   YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAF-----KTWSKVA 63
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              RA+ L      +++ K ELA+L TI+ GK  +EA+ ++       E+ A     +  
Sbjct: 64  VPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMG 123
Query: 133 KQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
              A ++  +E   +   + PIGVVG I P+
Sbjct: 124 DSLASIATDVE---AANYRYPIGVVGGIAPF 151

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 12  LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
           +FI+G+W   + ++ + ++NP + E++  IPA + E+ + A+D A +     K    +  
Sbjct: 2   MFIDGKW---INREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITK- 57
Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD 131
               R   L  IA +I E+K ELA +  ID GKP+++A  +++   G F+  A       
Sbjct: 58  ----RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAA-----FY 108
Query: 132 AKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            K+     +P ++   +  +EP+G+VG ITP+
Sbjct: 109 VKEHRDEVIPSDDRLIFTRREPVGIVGAITPF 140

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           FI GE+      +  P ++P T E++G        +V+ A  AA +A  R     WS   
Sbjct: 30  FIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQR-----WSRTK 84
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              R +YL  IA  I +   ELA +E +D G+ L      +   A  F +YA+ AE    
Sbjct: 85  AKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAME 144
Query: 133 KQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            +  PV     ++  Y ++ P G VG+ITPW
Sbjct: 145 DRTFPVD---RDWLYYTVRVPAGPVGIITPW 172

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           +I G W++        + NP T  ++  +P+   EDV  AV+A + AL       W   +
Sbjct: 15  YIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLT--NPWPIET 72
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              R K+L  I   + E + E+  +   + GKP +EA  ++D  AG F+Y A     LD+
Sbjct: 73  ---RRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDS 129
Query: 133 KQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                +    ++    V   P+GV GLI PW
Sbjct: 130 HT---IPEKPKDCTWTVHYRPVGVTGLIVPW 157

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           Q  +NG W +      I + NP    ++G +P+ +   ++ A+DA+ +ALS      W++
Sbjct: 34  QCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS-----GWAA 88
Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            +   RA  LR     I     ++A + T + GKPL EA  ++   A   E++A+ A+ +
Sbjct: 89  KTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRV 148
Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                  +  P    +  V+++P+GV   ITPW
Sbjct: 149 YGDT---IPAPQNGQRLTVIRQPVGVTAAITPW 178

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 1   MAMAIPI---PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAAR 57
           M +A P+   P    FI+G++ E         + P T E++  + AAT   VE A+ +A+
Sbjct: 3   MTIATPLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAK 62
Query: 58  QALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDV 116
           +A      K+W++ S   R + L+  A  + ER   L+ LET+D GKP++E  V D    
Sbjct: 63  RAQ-----KEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSG 117
Query: 117 AGCFEYYADLA-EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           A  FE++  +A   L+        +P+    +Y  + P+GV   I  W
Sbjct: 118 ADAFEFFGGIAPSALNGDY-----IPLGGDFAYTKRVPLGVCVGIGAW 160

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 7   IPSR-QLFINGEWREPVLKKRIPIVNP-TTEEIVGDIPAATAEDVELAVDAARQALSRNK 64
           I SR Q  ++G+  +      I  V+P    E+VG  P A+A+DV  AV AAR+A     
Sbjct: 19  IKSRYQXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGP 78
Query: 65  GKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYA 124
              W   SGA R++    +A  I  R+ ELA +E+++ GKP+ +A  +I   A  + Y A
Sbjct: 79  ---WPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAA 135
Query: 125 DLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             A  L+ +    +    ++    VL+EP+GVVG+ITPW
Sbjct: 136 GQARALEGQTHNNIG---DDRLGLVLREPVGVVGIITPW 171

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Query: 29  IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88
           I+NP T   + D+  A+   ++ AVDAA +A        WS  + A R+  L  IA  I 
Sbjct: 44  ILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV-----GWSQTTPAERSNALLKIADAIE 98
Query: 89  ERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS 147
           +   E A LE ++CGKP+     D +  +  C+ ++A     L A   A   LP     S
Sbjct: 99  KEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAP-AAGEYLP--GHTS 155
Query: 148 YVLKEPIGVVGLITPW 163
            + ++PIG+VG I PW
Sbjct: 156 XIRRDPIGIVGSIAPW 171

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
            +L INGE      +K+ P+ NP T +++ +I  A+AE V+ AV AA  A +     +W 
Sbjct: 24  HKLLINGELVSGEGEKQ-PVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA-----EWG 77
Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAE 128
             +   RA+ L  +A  I E     A LE+ +CGKPL  A  D I  +   F ++A  A 
Sbjct: 78  QTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAAR 137
Query: 129 GLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            L+          +E   S + ++P+GVV  I PW
Sbjct: 138 CLNGLAAGEY---LEGHTSMIRRDPLGVVASIAPW 169

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           QLFI GE+ +    K    +NPT   ++  +  A   DV+ AV AA++A        W  
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGL---WGK 94
Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG 129
            +   R + L  +A  + + + ELA +E +D G     A+   +      F Y+A     
Sbjct: 95  INARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC-- 152
Query: 130 LDAKQKAPVSL----PMENFKSYVLKEPIGVVGLITPW 163
            D  Q A + +    P  N  +   KEP+GV G++ PW
Sbjct: 153 -DKIQGATIPINQARPNRNL-TLTKKEPVGVCGIVIPW 188

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           QLFI GE+ +    K    +NPT   ++  +  A   DV+ AV AA++A        W  
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGL---WGK 94
Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG 129
            +   R + L  +A  + + + ELA +E +D G     A+   +      F Y+A     
Sbjct: 95  INARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC-- 152
Query: 130 LDAKQKAPVSL----PMENFKSYVLKEPIGVVGLITPW 163
            D  Q A + +    P  N  +   KEP+GV G++ PW
Sbjct: 153 -DKIQGATIPINQARPNRNL-TLTKKEPVGVCGIVIPW 188

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           QLFI GE+ +    K    +NPT   ++  +  A   DV+ AV AA++A        W  
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGL---WGK 94
Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG 129
            +   R + L  +A  + + + ELA +E +D G     A+   +      F Y+A     
Sbjct: 95  INARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC-- 152
Query: 130 LDAKQKAPVSL----PMENFKSYVLKEPIGVVGLITPW 163
            D  Q A + +    P  N  +   KEP+GV G++ PW
Sbjct: 153 -DKIQGATIPINQARPNRNL-TLTKKEPVGVCGIVIPW 188

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           QLFI GE+ +    K    +NPT   ++  +  A   DV+ AV AA++A        W  
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGL---WGK 94
Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG 129
            +   R + L  +A  + + + ELA +E +D G     A+   +      F Y+A     
Sbjct: 95  INARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC-- 152
Query: 130 LDAKQKAPVSL----PMENFKSYVLKEPIGVVGLITPW 163
            D  Q A + +    P  N  +   KEP+GV G++ PW
Sbjct: 153 -DKIQGATIPINQARPNRNL-TLTKKEPVGVCGIVIPW 188

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           QLFI GE+ +    K    +NPT   ++  +  A   DV+ AV AA++A        W  
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGL---WGK 94
Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG 129
            +   R + L  +A  + + + ELA +E +D G     A+   +      F Y+A     
Sbjct: 95  INARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC-- 152
Query: 130 LDAKQKAPVSL----PMENFKSYVLKEPIGVVGLITPW 163
            D  Q A + +    P  N  +   KEP+GV G++ PW
Sbjct: 153 -DKIQGATIPINQARPNRNL-TLTKKEPVGVCGIVIPW 188

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           QLFI GE+ +    K    +NPT   ++  +  A   DV+ AV AA++A        W  
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGL---WGK 94
Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG 129
            +   R + L  +A  + + + ELA +E +D G     A+   +      F Y+A     
Sbjct: 95  INARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC-- 152
Query: 130 LDAKQKAPVSL----PMENFKSYVLKEPIGVVGLITPW 163
            D  Q A + +    P  N  +   KEP+GV G++ PW
Sbjct: 153 -DKIQGATIPINQARPNRNL-TLTKKEPVGVCGIVIPW 188

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           M++P+    ++I+G++        I +VNP TE ++  IP   AED   A+DAA +A   
Sbjct: 1   MSVPV-QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP- 58
Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
               +W +     RA +LR I+A I ER SE++ L   + GK  + A  ++   A   +Y
Sbjct: 59  ----EWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDY 114
Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            A+ A   +  +      P EN    + K  +GV   I PW
Sbjct: 115 MAEWARRYEG-EIIQSDRPGENI--LLFKRALGVTTGILPW 152

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           M++P+    ++I+G++        I +VNP TE ++  IP   AED   A+DAA +A   
Sbjct: 1   MSVPV-QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP- 58
Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
               +W +     RA +LR I+A I ER SE++ L   + GK  + A  ++   A   +Y
Sbjct: 59  ----EWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDY 114
Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            A+ A   +  +      P EN    + K  +GV   I PW
Sbjct: 115 MAEWARRYEG-EIIQSDRPGENI--LLFKRALGVTTGILPW 152

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 32/166 (19%)
Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
           R+ +ING W +P     + +++P+TEE    I   +  D + A++AA++A      + W 
Sbjct: 26  RKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAF-----QTWK 80
Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGC---------- 119
           + S   R  ++  I     +R S++A   +++ G P++ A+ +     G           
Sbjct: 81  TTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMAL-NAQTATGSSHIRNFIKAY 139
Query: 120 --FEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             F +   L EG              N ++ +  + IGVVGLITPW
Sbjct: 140 KEFSFQEALIEG--------------NEQAILHYDAIGVVGLITPW 171

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           M++P+    ++I+G++        I +VNP TE ++  IP   AED   A+DAA +A   
Sbjct: 1   MSVPV-QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP- 58
Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
               +W +     RA +LR I+A I ER +E++ L   + GK  + A  ++   A   +Y
Sbjct: 59  ----EWEALPAIERASWLRKISAGIRERATEISALIVEEGGKIQQLAEVEVAFTADYIDY 114
Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            A+ A   +  +      P EN    + K  +GV   I PW
Sbjct: 115 MAEWARRYEG-EIIQSDRPGENI--LLFKRALGVTTGILPW 152

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           +INGEW E    + I ++NP TEE++G +      DV+ AV+AA          ++   S
Sbjct: 11  YINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL-----EFRHTS 65
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              R   L  I  +   RK ++    T + G PL  ++ +         ++    + LD 
Sbjct: 66  VKERQALLDKIVKEYENRKDDIVQAITDELGAPL--SLSERVHYQXGLNHFVAARDALDN 123
Query: 133 KQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            +              V+KE IGV GLITPW
Sbjct: 124 YE-----FEERRGDDLVVKEAIGVSGLITPW 149

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
            Q +I GEW+         + +P T E +G +P   A +   A++AA+ A +      W 
Sbjct: 13  HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA-----GWR 67
Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129
             +   RA  LR     +     +LA + T + GKPL EA  +I   A   E++A+    
Sbjct: 68  MKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAE---- 123
Query: 130 LDAKQKAPVSLPM--ENFKSYVLKEPIGVVGLITPW 163
            + K+ A  +LP    N +  V+KEPIGV   ITPW
Sbjct: 124 -EGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPW 158

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 9   SRQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKD 67
           S  L I+GE  E   + +I  +NP   EE+VG +  AT +  E A+ AA +A      + 
Sbjct: 37  SYPLVIDGERYE--TENKIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAF-----ET 89
Query: 68  WSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYA--- 124
           W       RA  L    AK+  +K E + L   + GKP  EA  D  +     EYYA   
Sbjct: 90  WRYTDPEERAAVLFRAVAKVRRKKHEFSALLVKEAGKPWNEADADTAEAIDFMEYYARQM 149
Query: 125 -DLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            +LA+G       PV+        YV   P GV  +I PW
Sbjct: 150 IELAKG------KPVNSREGERNQYVYT-PTGVTVVIPPW 182

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 1   MAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQAL 60
           MA+     +  +  NGEW E    +RI I  P +   +G IPA + E+V  A+  A+ A 
Sbjct: 3   MALQTEQFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDA- 61
Query: 61  SRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCF 120
                K W       R   L A A  + ERK  +  L   +  KP + A+ ++   A   
Sbjct: 62  ----QKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADII 117
Query: 121 EYYADLAEGLDAKQKAPVSLPMENFK-------SYVLKEPIGVVGLITPW 163
            + AD A  L+ +     +L  + FK       + V +EP+GVV  I+P+
Sbjct: 118 RHTADEALRLNGE-----TLKGDQFKGGSSKKIALVEREPLGVVLAISPF 162

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           FI G++        I I++P+T +++G+IPA    D E A++ A+ A         +  +
Sbjct: 16  FIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAW-----AKLT 70
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              R   LR  A KI E K  LA +   + GK L  A  ++D  A   +Y  D A  ++ 
Sbjct: 71  ARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEG 130
Query: 133 KQKAPVSLPMENF--KSYVLKEPIGVVGLITPW 163
                  LP +N   K Y+ K P GVV  IT W
Sbjct: 131 D-----ILPSDNQDEKIYIHKVPRGVVVGITAW 158

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 30  VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89
           VNP T E        T++ ++ A++ A         K W     A RA+ L  IA  + E
Sbjct: 9   VNPYTNEAFASYDNPTSKQIDEAINLAHALY-----KKWRHEEPASRAEILHDIANALKE 63
Query: 90  RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYV 149
            + ELA   T++ GK L E+  +++       YYAD       +   P  L  +   +Y 
Sbjct: 64  HEDELAKXXTLEXGKLLSESKEEVELCVSICNYYADHG----PEXLKPTKLNSDLGNAYY 119
Query: 150 LKEPIGVVGLITPW 163
           LK+  GV+    PW
Sbjct: 120 LKQSTGVIXACEPW 133

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 30  VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89
           VNP T + +   P A A+++E A+     +L+ +  K W   S A RA+ LR I   +  
Sbjct: 12  VNPATGQTLAAXPWANAQEIEHAL-----SLAASGFKKWKXTSVAQRAQTLRDIGQALRA 66
Query: 90  RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLP-----MEN 144
              E A   T + GKP+++A  ++   A   ++YA+           P  L      +EN
Sbjct: 67  HAEEXAQCITREXGKPIKQARAEVTKSAALCDWYAE---------HGPAXLNPEPTLVEN 117
Query: 145 FKSYVLKEPIGVVGLITPW 163
            ++ +   P+GV+  I PW
Sbjct: 118 QQAVIEYRPLGVILAIXPW 136

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           F+ G W         P+ +P +   +G +      +   AV AA +A  R     W   S
Sbjct: 16  FVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR-----WREVS 68
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              R+  LR     + + K +LA + T + GKPL+EA  +I   A   E++++ A  +  
Sbjct: 69  AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYG 128
Query: 133 KQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                +  P ++ ++ VLK+PIGV  +ITPW
Sbjct: 129 D---IIHTPAKDRRALVLKQPIGVAAVITPW 156

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           F+ G W         P+ +P +   +G +      +   AV AA +A  R     W   S
Sbjct: 16  FVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR-----WREVS 68
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              R+  LR     + + K +LA + T + GKPL+EA  +I   A   E++++ A  +  
Sbjct: 69  AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYG 128
Query: 133 KQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                +  P ++ ++ VLK+PIGV  +ITPW
Sbjct: 129 D---IIHTPAKDRRALVLKQPIGVAAVITPW 156

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 12  LFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           L INGE      + +I   NP   +++VG +  A  +  E A+ +A +A      + W +
Sbjct: 40  LIINGE--RVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAF-----QTWRN 92
Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            +   RA  L   AA I  RK E +     + GKP +EA  D  +     EYYA     L
Sbjct: 93  VNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIEL 152
Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           + + K  +S P E  + +    P+GV   I+PW
Sbjct: 153 N-RGKEILSRPGEQNRYFYT--PMGVTVTISPW 182

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           +LFI G+W +P     I +  P T E VG +P A A DV+ AV AAR A        W S
Sbjct: 10  KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGP---WPS 66
Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKP---LEEAVWDIDDVAGCFEYYADLA 127
                RA  + A    + ERK     L   + G+P   +E   W      G   Y+A  A
Sbjct: 67  TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHW--MGSMGAMNYFAGAA 124
Query: 128 EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           + +   +    S      +S V +EP+GVVG I  W
Sbjct: 125 DKVTWTETRTGSYG----QSIVSREPVGVVGAIVAW 156

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           ++NGEW+  + +  I I  P +   +G +PA + E+V+    +A++A        W + S
Sbjct: 8   YVNGEWK--LSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA-----WRALS 60
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              RA YL  +A  +   K ++  + + +  K  + AV ++   A    Y A+    ++ 
Sbjct: 61  YIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 133 KQKAPVSLPMENFK--SYVLKEPIGVVGLITPW 163
           +     S    + K  + V +EP+G+V  I+P+
Sbjct: 121 EVLEGGSFEAASKKKIAVVRREPVGLVLAISPF 153

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           ++NGEW+  + +  I I  P +   +G +PA + E+V+    +A++A        W + S
Sbjct: 8   YVNGEWK--LSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA-----WRALS 60
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              RA YL  +A  +   K ++  + + +  K  + AV ++   A    Y A+    ++ 
Sbjct: 61  YIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 133 KQKAPVSLPMENFK--SYVLKEPIGVVGLITPW 163
           +     S    + K  + V +EP+G+V  I+P+
Sbjct: 121 EVLEGGSFEAASKKKIAVVRREPVGLVLAISPF 153

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           ++NGEW+  + +  I I  P +   +G +PA + E+V+    +A++A        W + S
Sbjct: 8   YVNGEWK--LSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA-----WRALS 60
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              RA YL  +A  +   K ++  + + +  K  + AV ++   A    Y A+    ++ 
Sbjct: 61  YIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 133 KQKAPVSLPMENFK--SYVLKEPIGVVGLITPW 163
           +     S    + K  + V +EP+G+V  I+P+
Sbjct: 121 EVLEGGSFEAASKKKIAVVRREPVGLVLAISPF 153

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           ++NGEW+  + +  I I  P +   +G +PA + E+V+    +A++A        W + S
Sbjct: 8   YVNGEWK--LSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA-----WRALS 60
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              RA YL  +A  +   K ++  + + +  K  + AV ++   A    Y A+    ++ 
Sbjct: 61  YIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 133 KQKAPVSLPMENFK--SYVLKEPIGVVGLITPW 163
           +     S    + K  + V +EP+G+V  I+P+
Sbjct: 121 EVLEGGSFEAASKKKIAVVRREPVGLVLAISPF 153

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 13  FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSAS 72
           FING+W      +   I+NP  + ++     AT + +E A D A++A      K+W+ ++
Sbjct: 10  FINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQ-----KEWAKST 64
Query: 73  GAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDA 132
              R   L+     + E + ++  +   + G  + ++  +++      +        L  
Sbjct: 65  TEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGG 124
Query: 133 KQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            ++ P  +  +  K Y L  P+GV+  I+P+
Sbjct: 125 VKEVPSDIEGKTNKIYRL--PLGVISSISPF 153

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 7   IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGK 66
           I + +  I G+W E    +    +NP  + ++ +   A+  DV+ A +AA++A +     
Sbjct: 10  IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA----- 64
Query: 67  DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADL 126
           +W++   A R+  +   A  + E + E+      + G    +A  +I  +AG     +  
Sbjct: 65  EWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEI-TLAGNITKESAS 123
Query: 127 AEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             G    + +P + P +  + Y + +  GVVG+I+PW
Sbjct: 124 FPGRVHGRISPSNTPGKENRVYRVAK--GVVGVISPW 158

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	163
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	1e-73
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	9e-63
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	8e-53
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	3e-50
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	4e-50
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	4e-50
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	9e-50
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	1e-49
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	2e-49
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	4e-49
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	6e-49
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	7e-49
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	2e-48
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	2e-48
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	3e-48
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	4e-48
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	6e-44
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	2e-43
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	4e-43
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	9e-43
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	2e-42
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	2e-42
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	2e-39
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	1e-38
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	2e-38
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	6e-38
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	4e-36
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	2e-34
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	1e-33
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	2e-33
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	2e-33
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	4e-33
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	4e-33
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	7e-33
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	9e-33
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	1e-32
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	2e-31
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	5e-31
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	3e-23
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	6e-23
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	1e-21
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	9e-20
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	4e-19
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	2e-16
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	8e-11
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	1e-10

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  228 bits (583), Expect = 1e-73
 Identities = 124/161 (77%), Positives = 146/161 (90%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           M IPIP+RQLFING+W+ PVL KRIP++NP T+ I+GDIPAAT EDV++AV AA+ AL+R
Sbjct: 1   MDIPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTR 60

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
           NKG DW++ASGA RA+YLRAIAAK+TE+K ELA LE+IDCGKPL+EA WDIDDVAGCFEY
Sbjct: 61  NKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEY 120

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           YADLAE LDA+QKAPVSLPM+ FKS+VL+EPIGVVGLITPW
Sbjct: 121 YADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPW 161

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  200 bits (510), Expect = 9e-63
 Identities = 62/159 (38%), Positives = 93/159 (58%), Gaps = 6/159 (3%)

Query: 5   IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNK 64
           +   S++ +I+GEW E   K    I+NP  +E++  +   T ED E A+ AAR+A    +
Sbjct: 28  LKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAF---E 84

Query: 65  GKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYA 124
             +WS  +   R K +RAIA KI E +  LA LET+D GK LEE+  D+DD+   F Y+A
Sbjct: 85  SGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFA 144

Query: 125 DLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            LA+    +    +  P+ + +S ++KEP+GVV  ITPW
Sbjct: 145 GLADKDGGEM---IDSPIPDTESKIVKEPVGVVTQITPW 180

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  173 bits (441), Expect = 8e-53
 Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
           R+ +ING W +P     + +++P+TEE    I   +  D + A++AA++A      + W 
Sbjct: 26  RKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAF-----QTWK 80

Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAE 128
           + S   R  ++  I     +R S++A   +++ G P++ A        +     +    +
Sbjct: 81  TTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYK 140

Query: 129 GLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
               ++     L   N ++ +  + IGVVGLITPW
Sbjct: 141 EFSFQEA----LIEGNEQAILHYDAIGVVGLITPW 171

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  166 bits (423), Expect = 3e-50
 Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 14/155 (9%)

Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
            + +INGEW E    + I ++NP TEE++G +      DV+ AV+AA          ++ 
Sbjct: 8   TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVY-----LEFR 62

Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAE 128
             S   R   L  I  +   RK ++    T + G PL  +           F    D  +
Sbjct: 63  HTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALD 122

Query: 129 GLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             +                 V+KE IGV GLITPW
Sbjct: 123 NYE--------FEERRGDDLVVKEAIGVSGLITPW 149

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  167 bits (425), Expect = 4e-50
 Identities = 28/159 (17%), Positives = 50/159 (31%), Gaps = 12/159 (7%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           +  + G+W        I + +P T   +  + +   +       A         G    +
Sbjct: 9   KNHVAGQWIAGT-GAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDG-----GAALRA 62

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            + A RA  L  I   +  ++ +   + T + G    ++  DID       YYA L   L
Sbjct: 63  LTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASL 122

Query: 131 DAKQKA------PVSLPMENFKSYVLKEPIGVVGLITPW 163
                        +S        +VL    GV   I  +
Sbjct: 123 GEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF 161

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  166 bits (424), Expect = 4e-50
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 15/169 (8%)

Query: 1   MAMAIPIPSR-----QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDA 55
           M M I  P +       FI+G++ E         + P T E++  + AAT   VE A+ +
Sbjct: 1   MVMTIATPLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIAS 60

Query: 56  ARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDID 114
           A++A      K+W++ S   R + L+  A  + ER   L+ LET+D GKP++E  V D  
Sbjct: 61  AKRAQ-----KEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPT 115

Query: 115 DVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             A  FE++  +A    A       +P+    +Y  + P+GV   I  W
Sbjct: 116 SGADAFEFFGGIAP--SALNGD--YIPLGGDFAYTKRVPLGVCVGIGAW 160

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  165 bits (421), Expect = 9e-50
 Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 10/158 (6%)

Query: 7   IPSRQLFINGEWREPVLKKRI-PIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKG 65
           +     +  G   +        P+  P T  ++  +    AE+V+ AV +A+ A      
Sbjct: 17  VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAY----- 71

Query: 66  KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYAD 125
             WS  +G  R++ +   A  I ER+  +A LE I+ GK + EA +DID    C EYYA 
Sbjct: 72  LKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAG 131

Query: 126 LAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           LA  L  +    + LP   F +Y  +EP+GV   I  W
Sbjct: 132 LAPTLSGQH---IQLPGGAF-AYTRREPLGVCAGILAW 165

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  165 bits (421), Expect = 1e-49
 Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 7/154 (4%)

Query: 11  QLFINGEWREPVLKKRIPIVNP-TTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
           Q+ ++G+  +      I  V+P    E+VG  P A+A+DV  AV AAR+A        W 
Sbjct: 24  QMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAF---DAGPWP 80

Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129
             SGA R++ +  +A  I  R+ ELA +E+++ GKP+ +A  +I   A  + Y A  A  
Sbjct: 81  RMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQA-- 138

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             A +    +   ++    VL+EP+GVVG+ITPW
Sbjct: 139 -RALEGQTHNNIGDDRLGLVLREPVGVVGIITPW 171

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  165 bits (419), Expect = 2e-49
 Identities = 49/163 (30%), Positives = 67/163 (41%), Gaps = 9/163 (5%)

Query: 3   MAIPIPSR-QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALS 61
           M+       +LFI G+W +P     I +  P T E VG +P A A DV+ AV AAR A  
Sbjct: 1   MSDSATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAF- 59

Query: 62  RNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCF 120
                 W S     RA  + A    + ERK     L   + G+P             G  
Sbjct: 60  --DNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAM 117

Query: 121 EYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            Y+A  A+ +        +      +S V +EP+GVVG I  W
Sbjct: 118 NYFAGAADKVTWT----ETRTGSYGQSIVSREPVGVVGAIVAW 156

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  163 bits (416), Expect = 4e-49
 Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 1   MAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQAL 60
           +     +   +L INGE       ++ P+ NP T +++ +I  A+AE V+ AV AA  A 
Sbjct: 15  LYKKAGLMQHKLLINGELVSGE-GEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAF 73

Query: 61  SRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGC 119
                 +W   +   RA+ L  +A  I E     A LE+ +CGKPL  A   +I  +   
Sbjct: 74  -----AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDV 128

Query: 120 FEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           F ++A  A  L+    A   L      S + ++P+GVV  I PW
Sbjct: 129 FRFFAGAARCLNGLA-AGEYLE--GHTSMIRRDPLGVVASIAPW 169

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  163 bits (416), Expect = 6e-49
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 8/153 (5%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
             FI GE+      +  P ++P T E++G        +V+ A  AA +A      + WS 
Sbjct: 28  LHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAF-----QRWSR 82

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
                R +YL  IA  I +   ELA +E +D G+ L      +   A  F +YA+ AE  
Sbjct: 83  TKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHA 142

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
              +  PV     ++  Y ++ P G VG+ITPW
Sbjct: 143 MEDRTFPVD---RDWLYYTVRVPAGPVGIITPW 172

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  162 bits (412), Expect = 2e-48
 Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 7/154 (4%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           ++FIN EW   V  K+ P+ NP TEE + ++     EDV+ AV AARQA     G  W +
Sbjct: 22  KIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAF--QIGSPWRT 79

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEG 129
              + R + L  +A  I   +  LA +E ++ GK    A   D+        Y A  A+ 
Sbjct: 80  MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADK 139

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           +  +   P+     NF +Y   EP+GV G I PW
Sbjct: 140 IQGRT-IPMD---GNFFTYTRSEPVGVCGQIIPW 169

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  161 bits (411), Expect = 2e-48
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 10/159 (6%)

Query: 6   PIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKG 65
            +   QL I   +     +    I+NP T   + D+  A+   ++ AVDAA +A      
Sbjct: 22  SMMDTQLLIGSRFEAGT-EAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAF----- 75

Query: 66  KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYA 124
             WS  + A R+  L  IA  I +   E A LE ++CGKP+      ++  +  C+ ++A
Sbjct: 76  VGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFA 135

Query: 125 DLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                L A         +    S + ++PIG+VG I PW
Sbjct: 136 GAVRNLHAPAAGEY---LPGHTSMIRRDPIGIVGSIAPW 171

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  161 bits (410), Expect = 3e-48
 Identities = 62/170 (36%), Positives = 85/170 (50%), Gaps = 14/170 (8%)

Query: 2   AMAIPIPSR-------QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVD 54
             A+P P++       Q+FIN EW + V +K  P VNP+T E++  +     EDV+ AV 
Sbjct: 5   TQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVK 64

Query: 55  AARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DI 113
           AAR A     G  W     + R + L  +A  I   ++ LA LET+D GKP   +   D+
Sbjct: 65  AARAAF--QLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDL 122

Query: 114 DDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           D V  C  YYA  A+    K   P+     +F SY   EP+GV G I PW
Sbjct: 123 DMVLKCLRYYAGWADKYHGKT-IPID---GDFFSYTRHEPVGVCGQIIPW 168

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  161 bits (410), Expect = 4e-48
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 6/155 (3%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           QLFI GE+ +    K    +NPT   ++  +  A   DV+ AV AA++A    +   W  
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAF---ENGLWGK 94

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEG 129
            +   R + L  +A  + + + ELA +E +D G     A+   +      F Y+A   + 
Sbjct: 95  INARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDK 154

Query: 130 LDAKQKAPVSLPME-NFKSYVLKEPIGVVGLITPW 163
           +      P++        +   KEP+GV G++ PW
Sbjct: 155 IQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPW 188

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  150 bits (381), Expect = 6e-44
 Identities = 34/166 (20%), Positives = 69/166 (41%), Gaps = 11/166 (6%)

Query: 1   MAMAIPIPS---RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAAR 57
           M +          +  I G+W E    +    +NP  + ++ +   A+  DV+ A +AA+
Sbjct: 1   MVVTATFAGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAK 60

Query: 58  QALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVA 117
           +A       +W++   A R+  +   A  + E + E+      + G    +A  +I    
Sbjct: 61  KAQ-----AEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAG 115

Query: 118 GCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
              +  A     +   + +P + P    ++ V +   GVVG+I+PW
Sbjct: 116 NITKESASFPGRVHG-RISPSNTP--GKENRVYRVAKGVVGVISPW 158

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  149 bits (378), Expect = 2e-43
 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNP-TTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
            L+I GEW +   K+R+  +NP    E+VG    A   + E A++AA +A      K W 
Sbjct: 39  PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAF-----KTWK 91

Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129
                 R++ L   AA +  RK EL      + GK   EA  D+ +     EYYA  A  
Sbjct: 92  DWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALR 151

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                   V  P     +     P+G   +I PW
Sbjct: 152 YRYPAVEVVPYP--GEDNESFYVPLGAGVVIAPW 183

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  148 bits (376), Expect = 4e-43
 Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 11/154 (7%)

Query: 11  QLFINGEWREPVLKKRIPIVNP-TTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
            L INGE      + +I   NP   +++VG +  A  +  E A+ +A +A      + W 
Sbjct: 39  PLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAF-----QTWR 91

Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129
           + +   RA  L   AA I  RK E +     + GKP +EA  D  +     EYYA     
Sbjct: 92  NVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIE 151

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           L+  ++          ++     P+GV   I+PW
Sbjct: 152 LNRGKEILSR---PGEQNRYFYTPMGVTVTISPW 182

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  146 bits (372), Expect = 9e-43
 Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
             +I G+W      + +  ++P  + +V     A A  V+ AV AAR+A        W+ 
Sbjct: 7   THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAF-----PAWAR 60

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
                R + L   AA +  R  ELA +   + GKPL E+  ++  +              
Sbjct: 61  RPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRER 120

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             ++      P+ +  + +  +P GVV +  P+
Sbjct: 121 TGEKSG----PLADATAVLRHKPHGVVAVFGPY 149

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  146 bits (370), Expect = 2e-42
 Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 13/152 (8%)

Query: 12  LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
           +FI+G+W     ++ + ++NP + E++  IPA + E+ + A+D A +       +   + 
Sbjct: 2   MFIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYK-----EVMKNL 53

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD 131
               R   L  IA +I E+K ELA +  ID GKP+++A  +++   G F+  A   +   
Sbjct: 54  PITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHR 113

Query: 132 AKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            +      +P ++   +  +EP+G+VG ITP+
Sbjct: 114 DE-----VIPSDDRLIFTRREPVGIVGAITPF 140

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  146 bits (370), Expect = 2e-42
 Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 7/165 (4%)

Query: 1   MAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQAL 60
           MA+     +  +  NGEW E    +RI I  P +   +G IPA + E+V  A+  A+ A 
Sbjct: 3   MALQTEQFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQ 62

Query: 61  SRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCF 120
                K W       R   L A A  + ERK  +  L   +  KP + A+ ++   A   
Sbjct: 63  -----KIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADII 117

Query: 121 EYYADLAEGL--DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            + AD A  L  +  +            + V +EP+GVV  I+P+
Sbjct: 118 RHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPF 162

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  137 bits (348), Expect = 2e-39
 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 9/161 (5%)

Query: 3   MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           M++P+    ++I+G++        I +VNP TE ++  IP   AED   A+DAA +A   
Sbjct: 1   MSVPVQH-PMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQ-- 57

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
               +W +     RA +LR I+A I ER SE++ L   + GK  + A  ++   A   +Y
Sbjct: 58  ---PEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDY 114

Query: 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            A+ A   + +    +          + K  +GV   I PW
Sbjct: 115 MAEWARRYEGEI---IQSDRPGENILLFKRALGVTTGILPW 152

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  136 bits (344), Expect = 1e-38
 Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 7/164 (4%)

Query: 1   MAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQAL 60
           +     +P    ++ GEW      + I + +P     +  + + + E+VE  +D   +  
Sbjct: 10  IKEKGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRG 67

Query: 61  SRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCF 120
                       G  R   LR  A  I       A +  ++ GKP   AV ++       
Sbjct: 68  R----WSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRL 123

Query: 121 EYYADLAEGLDAK-QKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                  + +         +      +  V +EP+GVV  ITP+
Sbjct: 124 RLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPF 167

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  135 bits (342), Expect = 2e-38
 Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 9/155 (5%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           + ++NGEW+    +  I I  P +   +G +PA + E+V+    +A++A        W +
Sbjct: 6   KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQ-----PAWRA 58

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            S   RA YL  +A  +   K ++  + + +  K  + AV ++   A    Y A+    +
Sbjct: 59  LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM 118

Query: 131 --DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             +  +        +   + V +EP+G+V  I+P+
Sbjct: 119 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPF 153

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  134 bits (339), Expect = 6e-38
 Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 11/145 (7%)

Query: 25  KRIPIVNPTTEE-IVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAI 83
                 N  T E +    P  T  +V  A  AA +       +D+   + + RA  LR I
Sbjct: 7   NVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVA-----RDFRRLNNSKRASLLRTI 61

Query: 84  AAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKA-----PV 138
           A+++  R  ++     ++   P      +I   A     +AD+       Q       P 
Sbjct: 62  ASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPT 121

Query: 139 SLPMENFKSYVLKEPIGVVGLITPW 163
             P+        +  +G V +    
Sbjct: 122 RAPLPKPDIRRQQIALGPVAVFGAS 146

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  129 bits (326), Expect = 4e-36
 Identities = 28/153 (18%), Positives = 67/153 (43%), Gaps = 7/153 (4%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           + FING+W      +   I+NP  + ++     AT + +E A D A++A      K+W+ 
Sbjct: 8   KSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQ-----KEWAK 62

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
           ++   R   L+     + E + ++  +   + G  + ++  +++      +        L
Sbjct: 63  STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGEL 122

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
              ++ P  +      + + + P+GV+  I+P+
Sbjct: 123 GGVKEVPSDIE--GKTNKIYRLPLGVISSISPF 153

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  124 bits (314), Expect = 2e-34
 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 11/166 (6%)

Query: 1   MAMAIPIPS---RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAAR 57
           M++ +       +  FI G++        I I++P+T +++G+IPA    D E A++ A+
Sbjct: 1   MSLTVQDLHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQ 60

Query: 58  QALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVA 117
            A      K W+  +   R   LR  A KI E K  LA +   + GK L  A  ++D  A
Sbjct: 61  AAQ-----KAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTA 115

Query: 118 GCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
              +Y  D A  ++      +    ++ K Y+ K P GVV  IT W
Sbjct: 116 TFIDYGCDNALTIEGDI---LPSDNQDEKIYIHKVPRGVVVGITAW 158

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  122 bits (308), Expect = 1e-33
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 9/138 (6%)

Query: 26  RIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA 85
           +   VNP T E        T++ ++ A++ A         K W     A RA+ L  IA 
Sbjct: 5   KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALY-----KKWRHEEPASRAEILHDIAN 59

Query: 86  KITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENF 145
            + E + ELA + T++ GK L E+  +++       YYAD    +      P  L  +  
Sbjct: 60  ALKEHEDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEML----KPTKLNSDLG 115

Query: 146 KSYVLKEPIGVVGLITPW 163
            +Y LK+  GV+    PW
Sbjct: 116 NAYYLKQSTGVIMACEPW 133

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score =  122 bits (308), Expect = 2e-33
 Identities = 36/169 (21%), Positives = 59/169 (34%), Gaps = 19/169 (11%)

Query: 1   MAMAIPIPSRQLFINGEWREPV-LKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQA 59
           M      P  +  + GEW +        P   P  +         T E V  A +AA +A
Sbjct: 24  MIF---TPKGKHLVAGEWLDGAGTFASAPAHGPAHDF-----AVGTVELVNRACEAAEEA 75

Query: 60  LSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGC 119
                   +  +S   RA +LRAIA +I  R   +  + + + G P      +     G 
Sbjct: 76  F-----WTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQ 130

Query: 120 FEYYADLAEGLDAKQKA-----PVSLPMENFKSYVLKEPIGVVGLITPW 163
              +AD  E  D   +      P   P    +  +++ P+G V +    
Sbjct: 131 LRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGAS 179

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  121 bits (306), Expect = 2e-33
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 9/137 (6%)

Query: 27  IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86
              VNP T + +  +P A A+++E A+  A         K W   S A RA+ LR I   
Sbjct: 9   ALSVNPATGQTLAAMPWANAQEIEHALSLAASGF-----KKWKMTSVAQRAQTLRDIGQA 63

Query: 87  ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFK 146
           +     E+A   T + GKP+++A  ++   A   ++YA+    +      P    +EN +
Sbjct: 64  LRAHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAML----NPEPTLVENQQ 119

Query: 147 SYVLKEPIGVVGLITPW 163
           + +   P+GV+  I PW
Sbjct: 120 AVIEYRPLGVILAIMPW 136

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  121 bits (305), Expect = 4e-33
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 14/155 (9%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           +   NG W      + I    P   E +  +  A+  D E  V  AR+A      K W+ 
Sbjct: 25  EGVYNGSWGGR--GEVITTYCPANNEPIARVRQASVADYEETVKKAREAW-----KIWAD 77

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
                R + +R I   + E+   L +L +++ GK L E V ++ +     +Y   L    
Sbjct: 78  IPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGL---- 133

Query: 131 DAKQKAPVSLPME--NFKSYVLKEPIGVVGLITPW 163
            ++      LP E           P+G+VG+IT +
Sbjct: 134 -SRMIGGPILPSERSGHALIEQWNPVGLVGIITAF 167

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  121 bits (305), Expect = 4e-33
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 8/153 (5%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
             +I G W++        + NP T  ++  +P+   EDV  AV+A + AL     +  + 
Sbjct: 13  TGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSAL-----RLTNP 67

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
                R K+L  I   + E + E+  +  ++ GKP +EA  ++D  AG F+Y A     L
Sbjct: 68  WPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISAL 127

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           D+     +    ++    V   P+GV GLI PW
Sbjct: 128 DSHT---IPEKPKDCTWTVHYRPVGVTGLIVPW 157

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  120 bits (303), Expect = 7e-33
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 8/153 (5%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           Q +I GEW+         + +P T E +G +P   A +   A++AA+ A        W  
Sbjct: 14  QAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAW-----AGWRM 68

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            +   RA  LR     +     +LA + T + GKPL EA  +I   A   E++A+  + +
Sbjct: 69  KTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRV 128

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                  +  P  N +  V+KEPIGV   ITPW
Sbjct: 129 AGDT---LPTPDANKRIVVVKEPIGVCAAITPW 158

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  119 bits (302), Expect = 9e-33
 Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 8/153 (5%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           Q  INGEW +    + I + NP   + +G +P   A++   A+DAA +AL       W +
Sbjct: 11  QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRAL-----PAWRA 65

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            +   RA  LR     + E + +LA L T++ GKPL EA  +I   A   E++A+  + +
Sbjct: 66  LTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRI 125

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                  +     + +  V+K+PIGV   ITPW
Sbjct: 126 YGDT---IPGHQADKRLIVIKQPIGVTAAITPW 155

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  119 bits (301), Expect = 1e-32
 Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 8/153 (5%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           Q  +NG W +      I + NP    ++G +P+ +   ++ A+DA+ +AL       W++
Sbjct: 34  QCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKAL-----SGWAA 88

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            +   RA  LR     I     ++A + T + GKPL EA  ++   A   E++A+ A+ +
Sbjct: 89  KTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRV 148

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                  +  P    +  V+++P+GV   ITPW
Sbjct: 149 YGDT---IPAPQNGQRLTVIRQPVGVTAAITPW 178

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  116 bits (292), Expect = 2e-31
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 10/153 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
             F+ G W         P+ +P +   +G +      +   AV AA +A        W  
Sbjct: 14  DSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAF-----CRWRE 66

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            S   R+  LR     + + K +LA + T + GKPL+EA  +I   A   E++++ A  +
Sbjct: 67  VSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRV 126

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                  +  P ++ ++ VLK+PIGV  +ITPW
Sbjct: 127 YGDI---IHTPAKDRRALVLKQPIGVAAVITPW 156

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  116 bits (292), Expect = 5e-31
 Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 11/152 (7%)

Query: 13  FINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA 71
           FING+         IP VNP    E++G I  A   +V  A+ AA+ A        W   
Sbjct: 535 FINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAA-----FPAWRDT 587

Query: 72  SGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD 131
               RA+YL   A    +R  EL+  + ++ GK  ++A  D+ +     EYYA     L 
Sbjct: 588 DPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLG 647

Query: 132 AKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             Q+   +    N   +   EP GV  +I PW
Sbjct: 648 QPQRVGHAPGELN---HYFYEPKGVAAVIAPW 676

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score = 93.8 bits (234), Expect = 3e-23
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 7   IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGK 66
           I   + +INGEW E    +   +VNP T+E++  +P +T ED++ A   A +A      K
Sbjct: 3   IRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAF-----K 57

Query: 67  DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADL 126
            WS  +   RA+ L      +++ K ELA+L TI+ GK  +EA+ ++       E+ A  
Sbjct: 58  TWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGA 117

Query: 127 AEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
              +     A ++  +E   +   + PIGVVG I P+
Sbjct: 118 PSLMMGDSLASIATDVE---AANYRYPIGVVGGIAPF 151

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score = 93.1 bits (232), Expect = 6e-23
 Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 8/153 (5%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
             FI+G+       +   I NP T E+ G +  A+  D+  AV++A+ A        W++
Sbjct: 28  GHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQ-----PKWAA 82

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            +   RA+        + +  +ELA + + + GK +++A  DI       E+   +    
Sbjct: 83  TNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQ 142

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
            ++        ++    Y +++P+G+   ITP+
Sbjct: 143 KSEFTEGAGPGID---MYSIRQPVGIGAGITPF 172

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score = 89.8 bits (223), Expect = 1e-21
 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 7/132 (5%)

Query: 32  PTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK 91
                 +  I  AT +    AV AAR          WS      RA  L   A  +  R 
Sbjct: 535 KAETGDLKPIADATPDQAHAAVAAARAG-----FAGWSRTPAGIRAAALEQAAHLLESRS 589

Query: 92  SELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLK 151
           +    L   + GK L++A+ ++ + A    YYA     L   + A      E   + +  
Sbjct: 590 AHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFGSETAMPGPTGE--SNALTM 647

Query: 152 EPIGVVGLITPW 163
              GV   I+PW
Sbjct: 648 RGRGVFVAISPW 659

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score = 83.9 bits (208), Expect = 9e-20
 Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 10/123 (8%)

Query: 41  IPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETI 100
           +P     +++  +   ++A      +++++ S     K  RA +    + +  LA     
Sbjct: 1   MPVTNMAELDAMIARVKKAQ-----EEFATYSQEQVDKIFRAASLAANQARIPLAQQAVE 55

Query: 101 DCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLI 160
           + G  + E     +  A  F Y        D +    +    +N  +  + EP+G++  I
Sbjct: 56  ESGMGIVEDKVIKNHFASEFIYNK----YKDEQTCGILEE-DDNLGTMTIAEPVGIICGI 110

Query: 161 TPW 163
            P 
Sbjct: 111 VPT 113

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score = 81.9 bits (203), Expect = 4e-19
 Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 19/158 (12%)

Query: 12  LFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
             +  E            ++P      V     A    +  A+DAA  A      K+W  
Sbjct: 66  CVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAA-----RKEWDL 118

Query: 71  ASGAFRAKYLRAIAAKI-TERKSELANLETIDCGKPLEEAVWDIDDVAGC---FEYYADL 126
              A RA+     A  +   R++E+     +  GK + +A  +ID  A     F + A  
Sbjct: 119 KPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQA--EIDAAAELIDFFRFNAKF 176

Query: 127 AEGLDAKQKAPVSLP-MENFKSYVLKEPIGVVGLITPW 163
           A  L+ +Q  P+S+P   N   Y  +   G V  I+P+
Sbjct: 177 AVELEGEQ--PISVPPSTNHTVY--RGLEGFVAAISPF 210

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score = 74.3 bits (183), Expect = 2e-16
 Identities = 18/124 (14%), Positives = 46/124 (37%), Gaps = 10/124 (8%)

Query: 40  DIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLET 99
           D    + ++V   +++A +A      K+ ++ S       ++AIA      + +LA +  
Sbjct: 5   DKDLRSIQEVRNLIESANKAQ-----KELAAMSQQQIDTIVKAIADAGYGAREKLAKMAH 59

Query: 100 IDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGL 159
            + G  + +    +       ++  +  + +       +       K   +  P+GVV  
Sbjct: 60  EETGFGIWQD--KVIKNVFASKHVYNYIKDMKTIG---MLKEDNEKKVMEVAVPLGVVAG 114

Query: 160 ITPW 163
           + P 
Sbjct: 115 LIPS 118

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score = 58.3 bits (142), Expect = 8e-11
 Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 11/129 (8%)

Query: 39  GDIPAATA-EDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANL 97
           G +P  +    +  AV  AR A S  + +        FR + L A+   I E++ EL   
Sbjct: 9   GLVPRGSHMSKISEAVKRARAAFSSGRTRPL-----QFRIQQLEALQRLIQEQEQELVGA 63

Query: 98  ETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD---AKQKAPVSLPMENFKSYVLKEPI 154
              D  K    A    ++V    E    + + L    A +    +   +  + Y+  EP+
Sbjct: 64  LAADLHKNEWNAY--YEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPL 121

Query: 155 GVVGLITPW 163
           GVV +I  W
Sbjct: 122 GVVLVIGTW 130

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 10/122 (8%)

Query: 45  TAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGK 104
           +   ++    A +   +     D       FR + L  +   +   K  L +    D GK
Sbjct: 26  SPAKIDSLFSAQKAYFATRATADV-----GFRKQSLERLKEAVINNKEALYSALAEDLGK 80

Query: 105 PLEEAVWDIDDVAGCFEYYADLAEGLD---AKQKAPVSLPMENFKSYVLKEPIGVVGLIT 161
           P +     + ++             LD   A    P    +   + YV++EP GV  +I 
Sbjct: 81  PKDVVD--LAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIG 138

Query: 162 PW 163
           P+
Sbjct: 139 PF 140

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	163
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	99.98
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	99.97
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	99.97
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	99.97
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	99.97
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	99.97
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	99.97
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	99.97
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	99.97
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	99.97
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	99.97
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	99.97
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	99.96
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	99.96
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	99.96
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	99.96
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	99.96
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	99.96
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	99.96
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	99.96
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	99.96
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	99.96
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	99.96
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	99.96
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	99.96
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	99.96
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	99.96
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	99.96
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	99.96
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	99.96
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	99.96
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	99.96
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	99.96
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	99.95
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	99.95
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	99.94
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	99.94
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	99.94
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	99.93
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	99.93
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	99.93
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	99.92
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	99.92
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	99.88
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	99.83
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	99.81
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	99.72
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	99.72
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	99.7
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	99.7
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	99.69

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=2.2e-32  Score=227.47  Aligned_cols=148  Identities=35%  Similarity=0.578  Sum_probs=137.2

Q ss_pred             CCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230            7 IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK   86 (163)
Q Consensus         7 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~   86 (163)
                      ....++||||+|+.+.++.+++++||+||+++++++.++.+|++.||++|++||+     .|+.+|..+|.++|.+++++
T Consensus         4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~-----~W~~~~~~~R~~~L~~~a~~   78 (490)
T 2wme_A            4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK-----VWAAMTAMQRSRILRRAVDI   78 (490)
T ss_dssp             SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHH
Confidence            4456899999999988889999999999999999999999999999999999999     99999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           87 ITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        87 l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |++|+++|+.+++.|+|||+.++.. |+..+++.++||+.+++++.+..   .+.. .+...+++|+|+|||++|+||
T Consensus        79 l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~Pw  152 (490)
T 2wme_A           79 LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQ---IPLR-ETSFVYTRREPLGVVAGIGAW  152 (490)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEE---EEEE-TTEEEEEEEEECSEEEEECCS
T ss_pred             HHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcc---cccc-CCcceeEEecceeEEEEeccc
Confidence            9999999999999999999999986 79999999999999999887764   2222 467789999999999999999

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=99.98  E-value=5.9e-31  Score=219.66  Aligned_cols=159  Identities=77%  Similarity=1.319  Sum_probs=140.3

Q ss_pred             cCCCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 031230            5 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIA   84 (163)
Q Consensus         5 ~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~   84 (163)
                      ++.+..++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||..+++..|+.++..+|.++|.+++
T Consensus         3 ~~~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a   82 (503)
T 3iwj_A            3 IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIA   82 (503)
T ss_dssp             -CCCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHH
T ss_pred             CCCCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHH
Confidence            44556789999999988778899999999999999999999999999999999999844333699999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           85 AKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        85 ~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|++|+++|+.+++.|+|||..++..|+..+++.++|++.+++++.+....+.+....+...++.|+|+|||++|+||
T Consensus        83 ~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw  161 (503)
T 3iwj_A           83 AKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPW  161 (503)
T ss_dssp             HHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCC
Confidence            9999999999999999999999999999999999999999999988775422222222456789999999999999999

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=99.97  E-value=5.4e-30  Score=213.88  Aligned_cols=147  Identities=29%  Similarity=0.522  Sum_probs=136.5

Q ss_pred             CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      ...++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||.     .|+.++..+|.++|.+++++|
T Consensus        10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l   84 (506)
T 3rh9_A           10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR-----LTNPWPIETRRKWLEDIRDGL   84 (506)
T ss_dssp             SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC-----SSSCCCHHHHHHHHHHHHHHH
T ss_pred             cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHH
Confidence            456899999999887788999999999999999999999999999999999999     999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEE-eccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLK-EPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r-~P~GVV~~IsPw  163 (163)
                      ++|+++|+.+++.|+|||..++..|+..+++.++|++++++++.+..   .+.. .+...++.| +|+|||++|+||
T Consensus        85 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~~P~GVV~~I~Pw  157 (506)
T 3rh9_A           85 KENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHT---IPEK-PKDCTWTVHYRPVGVTGLIVPW  157 (506)
T ss_dssp             HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEE---CSCC-GGGCEEEEEEEECCSEEEECCS
T ss_pred             HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccC-CCceeeEeecccceEEEEECCC
Confidence            99999999999999999999999999999999999999999988763   2222 356788999 999999999999

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=99.97  E-value=8.3e-30  Score=213.36  Aligned_cols=147  Identities=42%  Similarity=0.703  Sum_probs=135.7

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHh--hccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQAL--SRNKGKDWSSASGAFRAKYLRAIAAK   86 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~--~~~~~~~w~~~~~~~R~~~L~~~~~~   86 (163)
                      .+++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||  .     .|+.++..+|.++|.+++++
T Consensus        32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~-----~w~~~~~~~R~~~L~~~a~~  106 (520)
T 3ed6_A           32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG-----EWSQETAETRGKKVRAIADK  106 (520)
T ss_dssp             CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT-----TTTTSCHHHHHHHHHHHHHH
T ss_pred             CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc-----ccccCCHHHHHHHHHHHHHH
Confidence            4578999999988778899999999999999999999999999999999999  8     99999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |++|+++|+.+++.|+|||..++..|+..+++.++|++.+++++.+..   .+....+...++.|+|+|||++|+||
T Consensus       107 l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVV~~I~Pw  180 (520)
T 3ed6_A          107 IKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEM---IDSPIPDTESKIVKEPVGVVTQITPW  180 (520)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEE---ECCSSTTEEEEEEEEECCEEEEECCS
T ss_pred             HHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCee---cccCCCCCcccccccCccEEEEECCC
Confidence            999999999999999999999999999999999999999999887753   22222466789999999999999999

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=99.97  E-value=6.1e-30  Score=213.29  Aligned_cols=149  Identities=31%  Similarity=0.454  Sum_probs=137.4

Q ss_pred             CCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230            7 IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK   86 (163)
Q Consensus         7 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~   86 (163)
                      ....++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+     .|+.++..+|.++|.+++++
T Consensus        10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~   84 (497)
T 3k2w_A           10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK-----AWAKLTARTRQNMLRTFANK   84 (497)
T ss_dssp             CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH-----HHHTSCHHHHHHHHHHHHHH
T ss_pred             ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHH
Confidence            3446899999999887778999999999999999999999999999999999999     99999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |++|+++|+.+++.|+|||..++..|+..+++.++|++++++++.+..   .+....+...++.|+|+|||++|+||
T Consensus        85 l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~Pw  158 (497)
T 3k2w_A           85 IRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDI---LPSDNQDEKIYIHKVPRGVVVGITAW  158 (497)
T ss_dssp             HHTTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEE---EECSSTTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCcceeEEEcCCceEEEECCC
Confidence            999999999999999999999999999999999999999999988763   22222467789999999999999999

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=99.97  E-value=9.5e-30  Score=211.50  Aligned_cols=147  Identities=31%  Similarity=0.522  Sum_probs=135.4

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      ..++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+     .|+.++..+|.++|.+++++|+
T Consensus        12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l~   86 (484)
T 3ifg_A           12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA-----GWRMKTAKERAAILRRWFDLVI   86 (484)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH-----HHHTSCHHHHHHHHHHHHHHHH
T ss_pred             ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHH
Confidence            35789999999877788999999999999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++..|+..+++.++||+...+++.+..   .+....+...++.|+|+|||++|+||
T Consensus        87 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~Pw  158 (484)
T 3ifg_A           87 ANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDT---LPTPDANKRIVVVKEPIGVCAAITPW  158 (484)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEE---ECCSSTTEEEEEEEEECSSEEEECCS
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc---ccccCCCceeEEEecCCcEEEEECCC
Confidence            9999999999999999999999999999999999999988877653   22222466789999999999999999

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=99.97  E-value=9.4e-30  Score=212.44  Aligned_cols=157  Identities=29%  Similarity=0.380  Sum_probs=134.9

Q ss_pred             CCcccCC--CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 031230            1 MAMAIPI--PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAK   78 (163)
Q Consensus         1 m~~~~~~--~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~   78 (163)
                      |.++...  ...++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||.     .|+.++..+|.+
T Consensus         1 ~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~-----~w~~~~~~~R~~   75 (505)
T 3prl_A            1 MVMALQTEQFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK-----IWKIRPIHERVD   75 (505)
T ss_dssp             --------CEECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHH
T ss_pred             CCccccCCccccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHH
Confidence            4444443  235889999999887778999999999999999999999999999999999999     999999999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCC---CceeEEEEeccc
Q 031230           79 YLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPME---NFKSYVLKEPIG  155 (163)
Q Consensus        79 ~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~r~P~G  155 (163)
                      +|.+++++|++|+++|+.+++.|+|||..++..||..+++.++|+++++.++.+... +......   +...++.|+|+|
T Consensus        76 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~P~G  154 (505)
T 3prl_A           76 LLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETL-KGDQFKGGSSKKIALVEREPLG  154 (505)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEE-EGGGSTTTCSSEEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-cccccccccCCceeEEEEcCCc
Confidence            999999999999999999999999999999999999999999999999998877531 1111001   456899999999


Q ss_pred             eEEEEccC
Q 031230          156 VVGLITPW  163 (163)
Q Consensus       156 VV~~IsPw  163 (163)
                      ||++|+||
T Consensus       155 VV~~I~Pw  162 (505)
T 3prl_A          155 VVLAISPF  162 (505)
T ss_dssp             EEEEEECS
T ss_pred             EEEEECCC
Confidence            99999999

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=99.97  E-value=1.2e-29  Score=211.69  Aligned_cols=146  Identities=29%  Similarity=0.530  Sum_probs=134.8

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+     .|+.++..+|.++|.+++++|++
T Consensus        33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~  107 (504)
T 3ek1_A           33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS-----GWAAKTAKERAGILRKWFDLIIA  107 (504)
T ss_dssp             SSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             cCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----hhccCCHHHHHHHHHHHHHHHHH
Confidence            4789999999887788999999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++..|+..+++.++||+.+..++.+..   .+....+...++.|+|+|||++|+||
T Consensus       108 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVV~~I~Pw  178 (504)
T 3ek1_A          108 NADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDT---IPAPQNGQRLTVIRQPVGVTAAITPW  178 (504)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEE---ECCSSTTEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccccccccceeeccCceEEEEECCC
Confidence            999999999999999999999999999999999999998876653   22222456789999999999999999

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=99.97  E-value=1.2e-29  Score=211.48  Aligned_cols=146  Identities=30%  Similarity=0.550  Sum_probs=133.7

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      ..++||||+|+.+.++ +++++||+||+++++++.++.+|++.|+++|++||+     .|+.++..+|.++|.+++++|+
T Consensus        25 ~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l~   98 (498)
T 4f3x_A           25 DTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV-----GWSQTTPAERSNALLKIADAIE   98 (498)
T ss_dssp             CCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHTTCCHHHHHHHHHHHHHHHH
T ss_pred             ccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHH
Confidence            4588999999987666 899999999999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHH-HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a-~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++ ..|+..+++.++|++++++++.+..   .+....+...++.|+|+|||++|+||
T Consensus        99 ~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~Pw  171 (498)
T 4f3x_A           99 KEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPA---AGEYLPGHTSMIRRDPIGIVGSIAPW  171 (498)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEEC---BEEEETTEEEEEEEEECCEEEEECCS
T ss_pred             HhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCcc---ccCCcccccceEEEcCcceEEEECCC
Confidence            999999999999999999999 7899999999999999998877653   22112466789999999999999999

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=99.97  E-value=2.4e-29  Score=209.88  Aligned_cols=146  Identities=32%  Similarity=0.542  Sum_probs=133.6

Q ss_pred             CccceeCceEecCCCCCe-eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKR-IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~-~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      ..++||||+|+.+.++.+ ++++||+||+++++++.++.+|++.|+++|++||.     .|+.++..+|.++|.+++++|
T Consensus        19 ~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l   93 (503)
T 1a4s_A           19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL-----KWSKMAGIERSRVMLEAARII   93 (503)
T ss_dssp             SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHH
T ss_pred             ccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----hcccCCHHHHHHHHHHHHHHH
Confidence            357899999998766677 99999999999999999999999999999999999     999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|+++|+.+++.|+|||..++..|+..+++.++|++++++++.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        94 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~Pw  165 (503)
T 1a4s_A           94 RERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQH---IQLP-GGAFAYTRREPLGVCAGILAW  165 (503)
T ss_dssp             HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEE---EECG-GGCEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---ccCC-CCceeEEEEecCceEEEECCC
Confidence            99999999999999999999998899999999999999999887653   1222 244679999999999999999

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=99.97  E-value=1.4e-29  Score=210.23  Aligned_cols=147  Identities=30%  Similarity=0.462  Sum_probs=134.5

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      ..++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+     .|+.++..+|.++|.+++++|+
T Consensus         6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~   80 (479)
T 2imp_A            6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP-----EWEALPAIERASWLRKISAGIR   80 (479)
T ss_dssp             ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHHH
T ss_pred             ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHH
Confidence            34789999999876677899999999999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++..|+..+++.++|++++++++.+..   .+....+...++.|+|+|||++|+||
T Consensus        81 ~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~Pw  152 (479)
T 2imp_A           81 ERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEI---IQSDRPGENILLFKRALGVTTGILPW  152 (479)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEE---ECCSSTTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCc---cccCCCCceeEEEEeccceEEEECCC
Confidence            9999999999999999999999999999999999999998887763   22222355789999999999999999

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=99.97  E-value=1.4e-29  Score=211.83  Aligned_cols=151  Identities=30%  Similarity=0.509  Sum_probs=132.4

Q ss_pred             CCcccC--C-CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 031230            1 MAMAIP--I-PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRA   77 (163)
Q Consensus         1 m~~~~~--~-~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~   77 (163)
                      |.+.++  . ...++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+     .|+.++..+|.
T Consensus         3 ~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~-----~w~~~~~~~R~   77 (517)
T 3r31_A            3 MTIATPLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK-----EWAAMSPMARG   77 (517)
T ss_dssp             -----CCTTCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHH
T ss_pred             cccCChhhcccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-----HhhhCCHHHHH
Confidence            555555  2 236899999999877788999999999999999999999999999999999999     99999999999


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhh----hccccccccCCCCCCceeEEEEec
Q 031230           78 KYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG----LDAKQKAPVSLPMENFKSYVLKEP  153 (163)
Q Consensus        78 ~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~~~r~P  153 (163)
                      ++|.+++++|++|+++|+.+++.|+|||..++  ||..+++.++|+++++++    +.+..   .+.. .+. .++.|+|
T Consensus        78 ~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~---~~~~-~~~-~~~~~~P  150 (517)
T 3r31_A           78 RILKRAADIMRERNDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDY---IPLG-GDF-AYTKRVP  150 (517)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCE---EECS-SSE-EEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCcc---cccC-CCc-ceEEEcC
Confidence            99999999999999999999999999999999  999999999999999887    55543   2222 344 8999999


Q ss_pred             cceEEEEccC
Q 031230          154 IGVVGLITPW  163 (163)
Q Consensus       154 ~GVV~~IsPw  163 (163)
                      +|||++|+||
T Consensus       151 ~GVV~~I~Pw  160 (517)
T 3r31_A          151 LGVCVGIGAW  160 (517)
T ss_dssp             CSEEEEECCS
T ss_pred             ccEEEEECCC
Confidence            9999999999

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=99.97  E-value=4.1e-29  Score=209.51  Aligned_cols=146  Identities=36%  Similarity=0.578  Sum_probs=134.9

Q ss_pred             ccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHh--hccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQAL--SRNKGKDWSSASGAFRAKYLRAIAAK   86 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~--~~~~~~~w~~~~~~~R~~~L~~~~~~   86 (163)
                      .++||||+|+.+.++.+++++||+| |+++++++.++.+|++.|+++|++||  .     .|+.++..+|.++|.+++++
T Consensus        23 ~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~-----~w~~~~~~~R~~~L~~~a~~   97 (528)
T 3u4j_A           23 YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG-----PWPRMSGAERSRLMFKVADL   97 (528)
T ss_dssp             CCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS-----SGGGSCHHHHHHHHHHHHHH
T ss_pred             cceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc-----ccccCCHHHHHHHHHHHHHH
Confidence            5789999999887788999999999 99999999999999999999999999  7     89999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |++|+++|+.+++.|+|||..++..|+..+++.++|++++++++.+..   .+....+...++.|+|+|||++|+||
T Consensus        98 l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~Pw  171 (528)
T 3u4j_A           98 ILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQT---HNNIGDDRLGLVLREPVGVVGIITPW  171 (528)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEE---ECCSCTTEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCee---eccCCCCceeEEEeccceEEEEECCC
Confidence            999999999999999999999998899999999999999999887653   22222466789999999999999999

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=99.96  E-value=7.3e-29  Score=206.27  Aligned_cols=147  Identities=18%  Similarity=0.355  Sum_probs=134.9

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      .+++||||+|+.+.++.+++++||+||+++++++.++.++++.|++.|++||+     .|+.++..+|.++|.+++++|+
T Consensus         6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~   80 (485)
T 4dng_A            6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK-----EWAKSTTEDRKAVLQKARGYLH   80 (485)
T ss_dssp             CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHTTCCHHHHHHHHHHHHHHHH
T ss_pred             ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HhCcCCHHHHHHHHHHHHHHHH
Confidence            35789999999877788999999999999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCC-CCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLP-MENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++..|+..+++.++|++++++.+.+..   .+.. ..+...++.|+|+|||++|+||
T Consensus        81 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~P~GVv~~I~Pw  153 (485)
T 4dng_A           81 ENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVK---EVPSDIEGKTNKIYRLPLGVISSISPF  153 (485)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEE---CCCCSSTTEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCee---ccccCCCCceEEEEEecceEEEEECCC
Confidence            9999999999999999999999999999999999999998776653   2211 2357789999999999999999

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=99.96  E-value=5.9e-29  Score=206.63  Aligned_cols=147  Identities=33%  Similarity=0.558  Sum_probs=135.1

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      ..++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+     .|+.++..+|.++|.+++++|+
T Consensus         9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~   83 (481)
T 3jz4_A            9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP-----AWRALTAKERATILRNWFNLMM   83 (481)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHHH
T ss_pred             ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----hcccCCHHHHHHHHHHHHHHHH
Confidence            45789999999887788999999999999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++..|+..+++.++|++....+..+..   .+....+...++.|+|+|||++|+||
T Consensus        84 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~Pw  155 (481)
T 3jz4_A           84 EHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDT---IPGHQADKRLIVIKQPIGVTAAITPW  155 (481)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEE---ECCSSTTEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccccCCCceEEEEEcCccEEEEECCC
Confidence            9999999999999999999999999999999999999988776653   22222466789999999999999999

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=99.96  E-value=4.1e-29  Score=209.04  Aligned_cols=146  Identities=30%  Similarity=0.499  Sum_probs=134.1

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||.     .|+.++..+|.++|.+++++|++
T Consensus        27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~  101 (515)
T 2d4e_A           27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ-----RWSRTKAKERKRYLLRIAELIEK  101 (515)
T ss_dssp             BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHHH
Confidence            4689999999876678899999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++..|+..+++.++|++++++++.+..   .+....+...++.|+|+|||++|+||
T Consensus       102 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~Pw  172 (515)
T 2d4e_A          102 HADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDR---TFPVDRDWLYYTVRVPAGPVGIITPW  172 (515)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEE---ECCBTTTEEEEEEEEECCCEEEECCS
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceeEEEEecCCceEEECCC
Confidence            999999999999999999999999999999999999999887753   22212356789999999999999999

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.6e-29  Score=210.39  Aligned_cols=146  Identities=23%  Similarity=0.358  Sum_probs=133.5

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||.     .|+.++..+|.++|.+++++|++
T Consensus        27 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~  101 (521)
T 4e4g_A           27 LGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP-----KWAATNPQRRARVFMKFVQLLND  101 (521)
T ss_dssp             ECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-----HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHHH
Confidence            5789999999887788999999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++..||..+++.++||++....+.+..   .+....+...++.|+|+|||++|+||
T Consensus       102 ~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~Pw  172 (521)
T 4e4g_A          102 NMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEF---TEGAGPGIDMYSIRQPVGIGAGITPF  172 (521)
T ss_dssp             HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEE---EEEEETTEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCcceeEEEcCCcEEEEECCC
Confidence            999999999999999999999999999999999999877666542   11112356789999999999999999

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=99.96  E-value=6.8e-29  Score=207.71  Aligned_cols=150  Identities=27%  Similarity=0.494  Sum_probs=132.9

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+.|   .|+.++..+|.++|.+++++|++
T Consensus        37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g---~w~~~~~~~R~~~L~~~a~~l~~  113 (517)
T 2o2p_A           37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENG---LWGKINARDRGRLLYRLADVMEQ  113 (517)
T ss_dssp             CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTS---GGGTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccC---ccccCCHHHHHHHHHHHHHHHHH
Confidence            368999999987566789999999999999999999999999999999999833   59999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCC-CCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSL-PMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||+.++. .||..+++.++||+++++++.+.. .+... ...+...++.|+|+|||++|+||
T Consensus       114 ~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~Pw  188 (517)
T 2o2p_A          114 HQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPW  188 (517)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCS
T ss_pred             hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCC
Confidence            999999999999999999998 799999999999999999887753 11110 01234679999999999999999

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=99.96  E-value=5.4e-29  Score=208.05  Aligned_cols=150  Identities=22%  Similarity=0.374  Sum_probs=136.3

Q ss_pred             CCCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 031230            6 PIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA   85 (163)
Q Consensus         6 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~   85 (163)
                      ..+.+++||||+|+.+.++.+++++||+||+++++++.++.++++.|++.|++||+     .|+.++..+|.++|.++++
T Consensus         9 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~   83 (508)
T 3r64_A            9 GIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA-----EWAATPAAERSAIIYRAAE   83 (508)
T ss_dssp             TBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHH
T ss_pred             CccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-----HhCcCCHHHHHHHHHHHHH
Confidence            34557899999999887788999999999999999999999999999999999999     9999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           86 KITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        86 ~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|++|+++|+.+++.|+|||..++..|+..+++.++|++++++++.+ . .+.. ...+...++.|+|+|||++|+||
T Consensus        84 ~l~~~~~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~-~~~~-~~~~~~~~~~~~P~GVv~~I~Pw  158 (508)
T 3r64_A           84 LLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-R-ISPS-NTPGKENRVYRVAKGVVGVISPW  158 (508)
T ss_dssp             HHHHTHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-E-EECC-SSTTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-c-cccc-CCCCceeEEEEecceEEEEECCC
Confidence            99999999999999999999999999999999999999999887665 2 1111 12357789999999999999999

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=99.96  E-value=1.6e-28  Score=204.28  Aligned_cols=144  Identities=29%  Similarity=0.523  Sum_probs=131.8

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .++||||+|+.+.  .+++++||+||+++++++.++.+|++.|+++|++||.     .|+.++..+|.++|.+++++|++
T Consensus        13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~   85 (487)
T 2w8n_A           13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC-----RWREVSAKERSSLLRKWYNLMIQ   85 (487)
T ss_dssp             CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHHH
Confidence            5789999999764  7899999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++..|+..+++.++|++++++++.+..   .+....+...++.|+|+|||++|+||
T Consensus        86 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~Pw  156 (487)
T 2w8n_A           86 NKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDI---IHTPAKDRRALVLKQPIGVAAVITPW  156 (487)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEE---ECCSCTTCEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceeEEEEecceEEEEECCC
Confidence            999999999999999999999999999999999999998876653   22212356789999999999999999

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=8.1e-29  Score=206.38  Aligned_cols=148  Identities=32%  Similarity=0.516  Sum_probs=134.1

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      ..++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||..|   .|+.++..+|.++|.+++++|+
T Consensus         8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g---~w~~~~~~~R~~~L~~~a~~l~   84 (495)
T 3b4w_A            8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNG---PWPSTPPHERAAVIAAAVKMLA   84 (495)
T ss_dssp             CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHS---STTTSCHHHHHHHHHHHHHHHH
T ss_pred             ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccC---ccccCCHHHHHHHHHHHHHHHH
Confidence            3478999999987667789999999999999999999999999999999999843   5999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++. .||..+++.++|++++++++.+..   .+.+ .+...++.|+|+|||++|+||
T Consensus        85 ~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~Pw  156 (495)
T 3b4w_A           85 ERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE---TRTG-SYGQSIVSREPVGVVGAIVAW  156 (495)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEE---EEEE-TTEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---ccCC-CCceEEEEEccCceEEEECCC
Confidence            9999999999999999999998 799999999999999999988763   2222 245679999999999999999

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=99.96  E-value=6.4e-29  Score=206.98  Aligned_cols=145  Identities=34%  Similarity=0.587  Sum_probs=132.2

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .++||||+|+.+.+ .+++++||+||+++++++.++.+|+++|+++|++||.     .|+.++..+|.++|.+++++|++
T Consensus        24 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~   97 (495)
T 1wnd_A           24 HKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA-----EWGQTTPKVRAECLLKLADVIEE   97 (495)
T ss_dssp             CCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHH
Confidence            57899999998655 7899999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++.. |+..+++.++|++++++++.+..   .+....+...++.|+|+|||++|+||
T Consensus        98 ~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVV~~I~Pw  169 (495)
T 1wnd_A           98 NGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLA---AGEYLEGHTSMIRRDPLGVVASIAPW  169 (495)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEEC---BEEEETTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCCCCCceeEEeeecCCeEEEECCC
Confidence            9999999999999999999988 99999999999999998887653   12111345679999999999999999

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=99.96  E-value=2.9e-28  Score=203.28  Aligned_cols=148  Identities=33%  Similarity=0.615  Sum_probs=132.5

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+.| | .|+.++..+|.++|.+++++|++
T Consensus        21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~-~-~w~~~~~~~R~~~L~~~a~~l~~   98 (501)
T 1bxs_A           21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIG-S-PWRTMDASERGRLLNKLADLIER   98 (501)
T ss_dssp             CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTT-S-HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcc-c-chhhCCHHHHHHHHHHHHHHHHH
Confidence            467999999987667789999999999999999999999999999999999710 0 39999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++. .|+..+++.++||+++++++.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        99 ~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw  169 (501)
T 1bxs_A           99 DRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT---IPMD-GNFFTYTRSEPVGVCGQIIPW  169 (501)
T ss_dssp             THHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEE---ECCS-SSEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCe---eecc-CCcceeEEecCCceEEEECCC
Confidence            999999999999999999875 599999999999999999988763   2222 355679999999999999999

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=99.96  E-value=1.3e-28  Score=204.74  Aligned_cols=146  Identities=30%  Similarity=0.469  Sum_probs=131.6

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      +++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+     .|+.+|..+|.++|.+++++|++
T Consensus         6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~   80 (486)
T 1t90_A            6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK-----TWSKVAVPRRARILFNFQQLLSQ   80 (486)
T ss_dssp             CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHHHT
T ss_pred             cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHH
Confidence            5789999999876677899999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++..|+..+++.++|++.....+.+..   .+....+...++.|+|+|||++|+||
T Consensus        81 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVV~~I~Pw  151 (486)
T 1t90_A           81 HKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDS---LASIATDVEAANYRYPIGVVGGIAPF  151 (486)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEE---EEEEETTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceeEEEecccCEEEEECCC
Confidence            999999999999999999999999999999999998776665542   11111355678999999999999999

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=99.96  E-value=1.4e-28  Score=204.11  Aligned_cols=144  Identities=25%  Similarity=0.412  Sum_probs=130.7

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      +++||||+|+.+.+  +++++||+||+++++++.++.+|++.++++|++||.     .|+.++..+|.++|.+++++|++
T Consensus         5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~   77 (475)
T 1euh_A            5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP-----AWRALSYIERAAYLHKVADILMR   77 (475)
T ss_dssp             CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHH
Confidence            47899999997643  899999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCC----cee-EEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMEN----FKS-YVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~----~~~-~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++..|+..+++.++|++++++++.+..   .+....+    ... ++.|+|+|||++|+||
T Consensus        78 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw  153 (475)
T 1euh_A           78 DKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEV---LEGGSFEAASKKKIAVVRREPVGLVLAISPF  153 (475)
T ss_dssp             THHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEE---EEGGGTCGGGTTEEEEEEEEECSEEEEECCT
T ss_pred             hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---ccCCCCCccccceeeEEEEeccceEEEECCC
Confidence            999999999999999999998999999999999999998887653   1111123    456 8999999999999999

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=99.96  E-value=2.9e-28  Score=204.78  Aligned_cols=144  Identities=30%  Similarity=0.439  Sum_probs=130.7

Q ss_pred             CccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      .+++||||+|+.  ++.+++++||+| |+++++++.++.+|++.|+++|++||.     .|+.++..+|.++|.+++++|
T Consensus        37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l  109 (538)
T 3qan_A           37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ-----TWRNVNPEERANILVKAAAII  109 (538)
T ss_dssp             EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHH
T ss_pred             ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH-----hhccCCHHHHHHHHHHHHHHH
Confidence            357899999997  578899999999 999999999999999999999999999     999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhh-hhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA-EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|+++|+.+++.|+|||..++..|+..+++.|+|+++++ ....+..   .+.. .+...++.|+|+|||++|+||
T Consensus       110 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw  182 (538)
T 3qan_A          110 RRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKE---ILSR-PGEQNRYFYTPMGVTVTISPW  182 (538)
T ss_dssp             HHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBC---CCCC-TTEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCee---eccc-CCcceeeecCCCcEEEEECCC
Confidence            9999999999999999999999999999999999999994 4444442   2222 366789999999999999999

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=99.96  E-value=1.9e-28  Score=204.24  Aligned_cols=144  Identities=26%  Similarity=0.517  Sum_probs=131.1

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+     .|+.++..+|.++|.+++++|++
T Consensus        26 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~  100 (497)
T 3i44_A           26 RKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ-----TWKTTSPHERLGFVEKILEIYEK  100 (497)
T ss_dssp             CCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHccCCHHHHHHHHHHHHHHHHH
Confidence            5789999999887778999999999999999999999999999999999999     99999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEE-EeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVL-KEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++. .|+..+++.++++++.+..+....   .. . .+...++. |+|+|||++|+||
T Consensus       101 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~---~~-~-~~~~~~~~~~~P~GVv~~I~Pw  171 (497)
T 3i44_A          101 RSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQE---AL-I-EGNEQAILHYDAIGVVGLITPW  171 (497)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE---ES-S-TTCSSCEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccc---cc-c-CCceeEEEeecCceEEEEECCC
Confidence            999999999999999999999 799999999999999887765442   11 1 23446777 9999999999999

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=99.96  E-value=3.5e-28  Score=202.78  Aligned_cols=145  Identities=23%  Similarity=0.373  Sum_probs=131.0

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      +.+.||||+|+.  ++.+++++||+||+++++++.++.+|++.|+++|++||.     .|+.++..+|.++|.+++++|+
T Consensus        23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~   95 (500)
T 2j6l_A           23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK-----IWADIPAPKRGEIVRQIGDALR   95 (500)
T ss_dssp             EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHH
Confidence            357899999994  567899999999999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++..|+..+++.++|++++++++.+..   .+....+...++.|+|+|||++|+||
T Consensus        96 ~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~Pw  167 (500)
T 2j6l_A           96 EKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPI---LPSERSGHALIEQWNPVGLVGIITAF  167 (500)
T ss_dssp             HTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBE---ECCSSTTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccccCCCceeEEEEecccEEEEECCC
Confidence            9999999999999999999998899999999999999988876653   22222344568899999999999999

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=99.96  E-value=2.5e-28  Score=202.96  Aligned_cols=139  Identities=29%  Similarity=0.524  Sum_probs=123.0

Q ss_pred             ceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 031230           12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK   91 (163)
Q Consensus        12 ~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~   91 (163)
                      +||||+|+.+  +. ++++||+||+++++++.++.+|++.|+++|++||.     .|+.++..+|.++|.+++++|++|+
T Consensus         2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~   73 (486)
T 3pqa_A            2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE-----VMKNLPITKRYNILMNIAKQIKEKK   73 (486)
T ss_dssp             -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH-----HHHTCCHHHHHHHHHHHHHHHHHTH
T ss_pred             eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence            5899999875  45 99999999999999999999999999999999999     9999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           92 SELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        92 ~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|+.+++.|+|||..++..|+..+++.++|+++++.++.+..   .+.  .+...++.|+|+|||++|+||
T Consensus        74 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~---~~~--~~~~~~~~~~P~GVv~~I~Pw  140 (486)
T 3pqa_A           74 EELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEV---IPS--DDRLIFTRREPVGIVGAITPF  140 (486)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE---ECC--TTEEEEEEEEECSEEEEEECS
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCce---ecC--CCceeEEEEccccEEEEECCC
Confidence            9999999999999999999999999999999999999987763   222  256789999999999999999

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=99.96  E-value=2.6e-28  Score=202.61  Aligned_cols=142  Identities=30%  Similarity=0.473  Sum_probs=132.5

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      ..++||||+|+.+.++.+++++||+||+++++++.++.+|++.+++.|++||+     .|+.++..+|.++|.+++++|+
T Consensus         7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~   81 (478)
T 3ty7_A            7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL-----EFRHTSVKERQALLDKIVKEYE   81 (478)
T ss_dssp             CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHHTSCHHHHHHHHHHHHHHHH
T ss_pred             hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHH
Confidence            35789999999887788999999999999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHH-HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a-~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++ ..|+..+++.++|+++.+.++.+..        .+...++.|+|+|||++|+||
T Consensus        82 ~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~Pw  149 (478)
T 3ty7_A           82 NRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPW  149 (478)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCS
T ss_pred             HhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCC
Confidence            999999999999999999999 6799999999999999998887653        123578999999999999999

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=99.96  E-value=6.1e-28  Score=202.03  Aligned_cols=145  Identities=30%  Similarity=0.472  Sum_probs=131.4

Q ss_pred             ccceeCceEecCCCCCeeeeecCC-CCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~-tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      +++||+|+|+.+  +.+++++||+ ||+++++++.++.+|++.|+++|++||+     .|+.++..+|.++|.+++++|+
T Consensus        38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l~  110 (516)
T 1uzb_A           38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK-----TWKDWPQEDRSRLLLKAAALMR  110 (516)
T ss_dssp             ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHHH
T ss_pred             cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHH
Confidence            468999999963  5789999999 6999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+.+++.|+|||..++..|+..+++.++||++++.++.+... +. ....+...++.|+|+|||++|+||
T Consensus       111 ~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~-~~-~~~~~~~~~~~~~P~GVv~~I~Pw  183 (516)
T 1uzb_A          111 RRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAV-EV-VPYPGEDNESFYVPLGAGVVIAPW  183 (516)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCC-CC-CCCTTEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cc-cCCCCceEEEEEeccceEEEECCC
Confidence            99999999999999999999999999999999999999999887631 11 112355679999999999999999

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=99.96  E-value=5.7e-28  Score=201.48  Aligned_cols=147  Identities=39%  Similarity=0.699  Sum_probs=131.8

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      ++||||+|+.+.++.+++++||+||+++++++.++.+|++.|++.|++||..+ | .|+.++..+|.++|.+++++|++|
T Consensus        21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~-~-~w~~~~~~~R~~~L~~~a~~l~~~   98 (500)
T 1o04_A           21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLG-S-PWRRMDASHRGRLLNRLADLIERD   98 (500)
T ss_dssp             SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTT-S-HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcc-c-ccccCCHHHHHHHHHHHHHHHHHH
Confidence            67999999987667889999999999999999999999999999999999710 0 399999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+.+++.|+|||..++. .|+..+++.++||+++++++.++.   .+.. .+...++.|+|+|||++|+||
T Consensus        99 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~Pw  168 (500)
T 1o04_A           99 RTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT---IPID-GDFFSYTRHEPVGVCGQIIPW  168 (500)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE---ECCS-SSEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc---eecC-CCceEEEEEecCCcEEEECCC
Confidence            99999999999999999885 599999999999999999988763   2222 355679999999999999999

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=99.96  E-value=5.1e-28  Score=201.39  Aligned_cols=143  Identities=24%  Similarity=0.388  Sum_probs=130.5

Q ss_pred             cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230           11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER   90 (163)
Q Consensus        11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~   90 (163)
                      ++||||+|+.+. +..++++||+||+++++++.++.++++.+++.|++||.     .|+.++..+|.++|.+++++|++|
T Consensus         7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~   80 (490)
T 3ju8_A            7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP-----AWARRPLEQRIELLERFAATLKSR   80 (490)
T ss_dssp             CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHHHH
Confidence            789999999863 56789999999999999999999999999999999999     999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++|+.+++.|+|||..++..|+..+++.++|++....++.+...   + ...+...++.|+|+|||++|+||
T Consensus        81 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~P~GVv~~I~Pw  149 (490)
T 3ju8_A           81 ADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKS---G-PLADATAVLRHKPHGVVAVFGPY  149 (490)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEE---E-EETTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---c-cCCCCeeeEEECCCCEEEEECCC
Confidence            999999999999999999999999999999999999888877631   1 11345567889999999999999

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=99.95  E-value=3.3e-27  Score=196.92  Aligned_cols=147  Identities=21%  Similarity=0.318  Sum_probs=130.3

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      +++||||+|+.+.  .+++++||+||+++++++.++.+|++.|+++|++||..    .|+.++..+|.++|.+++++|++
T Consensus        19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~----~w~~~~~~~R~~~L~~~a~~l~~   92 (501)
T 1uxt_A           19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW----SARDMPGTERLAVLRKAADIIER   92 (501)
T ss_dssp             ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH----HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh----hhccCCHHHHHHHHHHHHHHHHH
Confidence            4789999999763  78999999999999999999999999999999999961    39999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCC--CceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPME--NFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.+++.|+|||..++..|+..+++.++|++++++++.+.. .+......  +...++.|+|+|||++|+||
T Consensus        93 ~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw  167 (501)
T 1uxt_A           93 NLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDY-IPGDWTYDTLETEGLVRREPLGVVAAITPF  167 (501)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEE-EESTTSSTTTTEEEEEEEEECSEEEEECCT
T ss_pred             hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCcCceEEEEEeeccEEEEECCC
Confidence            999999999999999999999999999999999999999886653 11111012  33679999999999999999

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.4e-26  Score=194.31  Aligned_cols=145  Identities=21%  Similarity=0.310  Sum_probs=125.9

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeee-EecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVG-DIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~-~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      ..++||||+|+.+.+     ++||+||++++ +++.++.+|++.|+++|++||.     .|+.++..+|.++|.+++++|
T Consensus        29 ~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l   98 (528)
T 3v4c_A           29 KGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW-----TYGYSSRKERAAFLRAIADEI   98 (528)
T ss_dssp             CCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH-----HHTTCCHHHHHHHHHHHHHHH
T ss_pred             ccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHH
Confidence            357899999997642     99999999998 9999999999999999999999     999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhh--hcccccc-ccC--CCCCCceeEEEEeccceEEEEcc
Q 031230           88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG--LDAKQKA-PVS--LPMENFKSYVLKEPIGVVGLITP  162 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~--~~~~~~~-~~~--~~~~~~~~~~~r~P~GVV~~IsP  162 (163)
                      ++|+++|+.+++.|+|||..++..|+..+++.++||++.+++  +.+.... ..+  .+..+...++.|+|+|||++|+|
T Consensus        99 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P  178 (528)
T 3v4c_A           99 EARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA  178 (528)
T ss_dssp             HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred             HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence            999999999999999999999999999999999999999887  3333110 001  11123457899999999999999


Q ss_pred             C
Q 031230          163 W  163 (163)
Q Consensus       163 w  163 (163)
                      |
T Consensus       179 w  179 (528)
T 3v4c_A          179 S  179 (528)
T ss_dssp             S
T ss_pred             C
Confidence            9

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=99.94  E-value=2.1e-26  Score=204.36  Aligned_cols=145  Identities=31%  Similarity=0.468  Sum_probs=132.6

Q ss_pred             CccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      ..++||||+|+.+  +.+++++||+| ++++++++.++.++++.|+++|++||.     .|+.+|..+|+++|.+++++|
T Consensus       531 ~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~-----~W~~~~~~eRa~iL~~~Adll  603 (1026)
T 4f9i_A          531 TYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP-----AWRDTDPRTRAEYLLKAAQAA  603 (1026)
T ss_dssp             EECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH-----HHHTSCHHHHHHHHHHHHHHH
T ss_pred             ccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-----hcccCCHHHHHHHHHHHHHHH
Confidence            3578999999863  57899999998 899999999999999999999999999     999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|+++|+.+++.|+|||..++..||..+++.++||+.++.++.+...   +....+...++.|+|+|||++|+||
T Consensus       604 ~~~~~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~---~~~~~g~~~~~~~~PlGVV~~I~Pw  676 (1026)
T 4f9i_A          604 RKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQR---VGHAPGELNHYFYEPKGVAAVIAPW  676 (1026)
T ss_dssp             HHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEE---ECCCTTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCcc---ccCCCCccceeEeecCceEEEeCCC
Confidence            999999999999999999999999999999999999999998876642   1112466788999999999999999

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=99.94  E-value=6.1e-26  Score=190.62  Aligned_cols=147  Identities=21%  Similarity=0.303  Sum_probs=126.1

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHH-hhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQA-LSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a-~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      .++||||+|+.+.+ .+++++||+||+++++++.++ +|++.|+++|++| |+     .|+.++..+|.++|.+++++|+
T Consensus         8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~-----~w~~~~~~~R~~~L~~~a~~l~   80 (534)
T 2y53_A            8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA-----ALRALTYAQRAARLADIVKLLQ   80 (534)
T ss_dssp             CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHHH
T ss_pred             hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh-----hhhhCCHHHHHHHHHHHHHHHH
Confidence            47899999997643 579999999999999999998 8999999999999 58     8999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccc----cccCCCCC-CceeEEEEecc-ceEEEEcc
Q 031230           89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQK----APVSLPME-NFKSYVLKEPI-GVVGLITP  162 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~----~~~~~~~~-~~~~~~~r~P~-GVV~~IsP  162 (163)
                      +|+++|+.+++.|+|||..++..|+..+++.++||+..++++.+...    ...+.... ....++.|+|+ |||++|+|
T Consensus        81 ~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~P  160 (534)
T 2y53_A           81 AKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINA  160 (534)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECC
T ss_pred             HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECC
Confidence            99999999999999999999988999999999999998877643210    00111111 23468899997 99999999


Q ss_pred             C
Q 031230          163 W  163 (163)
Q Consensus       163 w  163 (163)
                      |
T Consensus       161 w  161 (534)
T 2y53_A          161 F  161 (534)
T ss_dssp             T
T ss_pred             C
Confidence            9

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=99.94  E-value=4.1e-26  Score=192.41  Aligned_cols=145  Identities=21%  Similarity=0.249  Sum_probs=128.7

Q ss_pred             CccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      .+++||||+|+.+.  ..+.++||.| ++++++++.++.+|++.|+++|++||+     .|+.++..+|.++|.+++++|
T Consensus        63 ~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~-----~W~~~~~~~R~~iL~~~a~~l  135 (563)
T 4e3x_A           63 AIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK-----EWDLKPMADRAQVFLKAADML  135 (563)
T ss_dssp             ECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHH
T ss_pred             cCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHH
Confidence            46899999999753  4677899998 799999999999999999999999999     999999999999999999999


Q ss_pred             HHh-HHHHHHHHHHHcCCCHHHHHHh-HHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TER-KSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~-~~~la~~~~~e~Gkp~~~a~~e-v~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++ +++|+.+++.|+|||..++..| +..+++.++|++..+.++.+...  ...+ .+...++.|.|+|||++|+||
T Consensus       136 ~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~--~~~~-~~~~~~~~r~p~GVV~~I~Pw  210 (563)
T 4e3x_A          136 SGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQP--ISVP-PSTNHTVYRGLEGFVAAISPF  210 (563)
T ss_dssp             HTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCC--CCCT-TEEEEEECCBCSSEEEEECCS
T ss_pred             HhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCc--cCCC-CCcceEEEecCceEEEEECCc
Confidence            999 9999999999999999999886 99999999999999999887631  1111 234467778888999999999

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=99.93  E-value=1.1e-25  Score=187.08  Aligned_cols=129  Identities=28%  Similarity=0.427  Sum_probs=120.9

Q ss_pred             eeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Q 031230           26 RIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP  105 (163)
Q Consensus        26 ~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp  105 (163)
                      +++++||+||+++++++.++.+|+++|+++|++||+     .|+.++..+|.++|.+++++|++|+++|+.+++.|+|||
T Consensus         5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~   79 (484)
T 3ros_A            5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK-----KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKL   79 (484)
T ss_dssp             CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH-----HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred             ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-----HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence            589999999999999999999999999999999999     999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          106 LEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       106 ~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ..++..|+..+++.++|++++++++.+...   +.. .+...++.|+|+|||++|+||
T Consensus        80 ~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~---~~~-~~~~~~~~~~P~GVV~~I~Pw  133 (484)
T 3ros_A           80 LSESKEEVELCVSICNYYADHGPEMLKPTK---LNS-DLGNAYYLKQSTGVIMACEPW  133 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTSCEE---ECC-TTSEEEEEEECCCEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCee---ccC-CCceeEEEecCCceEEEECCC
Confidence            999999999999999999999999887742   212 456789999999999999999

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=99.93  E-value=1.5e-25  Score=185.89  Aligned_cols=134  Identities=22%  Similarity=0.287  Sum_probs=119.4

Q ss_pred             CCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 031230           22 VLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETID  101 (163)
Q Consensus        22 ~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e  101 (163)
                      ..+++++++||+||+++++++.++.+|+++||++|++||+     .|+.+|..+|.++|.+++++|++|+++|+++++.|
T Consensus         3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e   77 (474)
T 4h7n_A            3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS-----RWQELGVEGRITTLQQWKQAILSRREQLTEALVND   77 (474)
T ss_dssp             CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH-----HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred             CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999     99999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          102 CGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       102 ~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +||+. ++..|+..+++.+++++.++.++......  ....++...+..++|+|||++|+||
T Consensus        78 ~Gk~~-~~~~ev~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~I~Pw  136 (474)
T 4h7n_A           78 TGRLS-ITVLEIDSFLASIDRWCGLAPELLQTSAK--NTSIPFIALQQSLVPYPLVGVISPW  136 (474)
T ss_dssp             HSCSH-HHHHHHHHHHHHHHHHHHHHHHHHCCEEE--ECSSTTEEEEEEEEECSEEEEEECS
T ss_pred             cCCcH-HHHHHHHHHHHHHHHHHhhhhhccccccc--CCCCCCccceEEEEeccEEEEECCC
Confidence            99985 55579999999999999998887665321  2222456678889999999999999

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=99.93  E-value=2.5e-25  Score=184.02  Aligned_cols=132  Identities=27%  Similarity=0.446  Sum_probs=121.8

Q ss_pred             CCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 031230           23 LKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDC  102 (163)
Q Consensus        23 ~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~  102 (163)
                      +..+++++||+||+++++++.++.++++.++++|++||.     .|+.++..+|.++|.+++++|++|+++|+.+++.|+
T Consensus         5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~   79 (462)
T 3etf_A            5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK-----KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREM   79 (462)
T ss_dssp             -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            456799999999999999999999999999999999999     999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          103 GKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       103 Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |||..++..|+..+++.++|+++.++++.+..    +....+...++.|+|+|||++|+||
T Consensus        80 Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~I~Pw  136 (462)
T 3etf_A           80 GKPIKQARAEVTKSAALCDWYAEHGPAMLNPE----PTLVENQQAVIEYRPLGVILAIMPW  136 (462)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCE----ECSSGGGCEEEEEEECSEEEEECCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhHHHhcCCc----ccCCCCceeEEEeecCcEEEEECCC
Confidence            99999999999999999999999999887763    1222356789999999999999999

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=99.92  E-value=1.2e-24  Score=181.83  Aligned_cols=136  Identities=18%  Similarity=0.220  Sum_probs=118.5

Q ss_pred             CCCCeeeeecCCCCCee-eEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 031230           22 VLKKRIPIVNPTTEEIV-GDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETI  100 (163)
Q Consensus        22 ~~~~~~~v~~P~tg~~~-~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~  100 (163)
                      .++.+++++||+||+++ ++++.++.+|++.|+++|++||+     .|+.++..+|.++|.+++++|++|+++|+.+++.
T Consensus         4 ~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~   78 (510)
T 1ez0_A            4 QTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR-----DFRRLNNSKRASLLRTIASELEARSDDIIARAHL   78 (510)
T ss_dssp             -CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH-----HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            35678999999999999 79999999999999999999999     9999999999999999999999999999999999


Q ss_pred             HcCCCHHHHHHhHHHHHHHHHHHHHhhhh--hcccccccc--CC--CCCCceeEEEEeccceEEEEccC
Q 031230          101 DCGKPLEEAVWDIDDVAGCFEYYADLAEG--LDAKQKAPV--SL--PMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       101 e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~--~~~~~~~~~--~~--~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+|||..++..|+..+++.++||++++++  +.+.. ...  +.  +......++.|+|+|||++|+||
T Consensus        79 e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw  146 (510)
T 1ez0_A           79 ETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAI-LDTPNPTRAPLPKPDIRRQQIALGPVAVFGAS  146 (510)
T ss_dssp             HHCCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEE-EECCBTTCSSSCBCCEEEEEEECSCEEEECCS
T ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHHHHHhCcccccc-ccccccccCCCCCCCceEEEecCcEEEEECCc
Confidence            99999999988999999999999999886  55432 100  11  11112468999999999999999

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=99.92  E-value=1.9e-24  Score=178.54  Aligned_cols=134  Identities=17%  Similarity=0.221  Sum_probs=105.4

Q ss_pred             CeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 031230           25 KRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGK  104 (163)
Q Consensus        25 ~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gk  104 (163)
                      ..+++.||.||+++++++.++.+|++.++++|++||.     .|+.++..+|.++|.+++++|++|+++|+.+++.|+||
T Consensus         6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk   80 (457)
T 3lns_A            6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA-----TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGK   80 (457)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHHHHH-----TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCC
T ss_pred             ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999999     99999999999999999999999999999999999999


Q ss_pred             CHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          105 PLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       105 p~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |..++. .|+..+++.++|+++.+.++.+....+.+....+...++.|+|+|||++|+||
T Consensus        81 ~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw  140 (457)
T 3lns_A           81 PKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPF  140 (457)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCC
Confidence            999998 49999999999999999988765322222222356789999999999999999

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=99.88  E-value=2.7e-23  Score=171.82  Aligned_cols=131  Identities=16%  Similarity=0.107  Sum_probs=96.7

Q ss_pred             eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc----
Q 031230           27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDC----  102 (163)
Q Consensus        27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~----  102 (163)
                      --++||+||+++++++.++.+|+++|+++|++||+     .|+.++..+|.++|.+++++|++|+++|+.+++.|+    
T Consensus         9 ~~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~   83 (463)
T 2h5g_A            9 SGVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR-----MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAE   83 (463)
T ss_dssp             --------------------CCHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             CCCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccc
Confidence            34789999999999999999999999999999999     999999999999999999999999999999999999    


Q ss_pred             ---CCCHH----HHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          103 ---GKPLE----EAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       103 ---Gkp~~----~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                         |||+.    ++..||..+++.++|+++++.++.+... +......+...++.|+|+|||++|+||
T Consensus        84 ~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~  150 (463)
T 2h5g_A           84 GRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVL-RRTRIAKNLELEQVTVPIGVLLVIFES  150 (463)
T ss_dssp             TTSCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEE-EEEEEETTEEEEEEEEECCEEEEEESS
T ss_pred             ccCCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCccc-ccccCCCCceeEEEEEcCceEEEEecC
Confidence               79997    4678999999999999999888877631 111101345678999999999999955

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=99.83  E-value=4.9e-20  Score=152.61  Aligned_cols=115  Identities=25%  Similarity=0.274  Sum_probs=98.4

Q ss_pred             CCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHH
Q 031230           44 ATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEY  122 (163)
Q Consensus        44 ~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~  122 (163)
                      .+.+|++.|+++|++||+     .|+.++..+|.++|.+++++|++|+++|+.+++.|+|||..++. .|+..+++.+++
T Consensus        15 ~s~~dv~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~   89 (469)
T 3sza_A           15 SHMSKISEAVKRARAAFS-----SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEY   89 (469)
T ss_dssp             ---CHHHHHHHHHHHHHH-----TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence            456699999999999999     99999999999999999999999999999999999999999997 499999999999


Q ss_pred             HHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +++++.++.............+...++.|+|+|||++|+||
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw  130 (469)
T 3sza_A           90 MIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTW  130 (469)
T ss_dssp             HHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHhhhcccccCccccCCCccceeeccCCCEEEEECCC
Confidence            99988877654322111112345689999999999999999

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=99.81  E-value=3e-19  Score=158.42  Aligned_cols=118  Identities=26%  Similarity=0.401  Sum_probs=106.5

Q ss_pred             eEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHH
Q 031230           39 GDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAG  118 (163)
Q Consensus        39 ~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~  118 (163)
                      ..++.++.++++.|++.|++||.     .|+.+|..+|.++|.+++++|++|+++|+.+++.|+|||..++..||..+++
T Consensus       542 ~pv~~a~~~dv~~Av~aA~~A~~-----~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~  616 (1001)
T 3haz_A          542 KPIADATPDQAHAAVAAARAGFA-----GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAAD  616 (1001)
T ss_dssp             CCCCCCCHHHHHHHHHHHHHHHH-----HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHH
Confidence            34899999999999999999999     9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          119 CFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       119 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .++||+..++++.+... ..+.. .+...++.++|+|||++|+||
T Consensus       617 ~lr~~a~~a~~~~g~~~-~~~~~-~g~~~~~~~~P~GVV~~I~Pw  659 (1001)
T 3haz_A          617 FCRYYAAQGRKLFGSET-AMPGP-TGESNALTMRGRGVFVAISPW  659 (1001)
T ss_dssp             HHHHHHHHHHHHHSSCE-ECCCC-TTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHhhcCccc-cccCC-CCCceEEEEeCCcEEEEEcCC
Confidence            99999999988776421 12222 456789999999999999999

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=99.72  E-value=3.7e-17  Score=134.81  Aligned_cols=111  Identities=16%  Similarity=0.244  Sum_probs=89.2

Q ss_pred             ecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHH
Q 031230           41 IPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGC  119 (163)
Q Consensus        41 ~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~  119 (163)
                      ++.++.++++.+++.|++||+     .|+.++.++|.++|.+++++|++|+++|+++++.|+|||..++.. ++..+++.
T Consensus         1 ~~~a~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~   75 (452)
T 3my7_A            1 MPVTNMAELDAMIARVKKAQE-----EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEF   75 (452)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHH-----HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence            356889999999999999999     999999999999999999999999999999999999999999986 77777777


Q ss_pred             H-HHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          120 F-EYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       120 l-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      + ++++..  +..+.    .+.. .+...++.++|+|||++|+||
T Consensus        76 ~~~~~~~~--~~~g~----~~~~-~~~~~~~~~~P~GVv~~I~P~  113 (452)
T 3my7_A           76 IYNKYKDE--QTCGI----LEED-DNLGTMTIAEPVGIICGIVPT  113 (452)
T ss_dssp             HHHHHTTC--CCSEE----C--------CEEEEEECCEEEEEECT
T ss_pred             HHHHhhhc--ccccc----ccCC-CCCceEEEecCceEEEEEcCC
Confidence            7 444331  12221    1111 244568999999999999999

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=99.72  E-value=1.4e-17  Score=136.44  Aligned_cols=112  Identities=21%  Similarity=0.277  Sum_probs=92.1

Q ss_pred             CHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHH--------Hh
Q 031230           45 TAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL----EEAV--------WD  112 (163)
Q Consensus        45 ~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~----~~a~--------~e  112 (163)
                      ..+++++++++|++||.     .|+.+|..+|.++|.+++++|++|+++|+.+++.|+|||.    .++.        .|
T Consensus        12 ~~~~~~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~e   86 (427)
T 1o20_A           12 HMDELLEKAKKVREAWD-----VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKR   86 (427)
T ss_dssp             --CHHHHHHHHHHHHHH-----HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHH
T ss_pred             hhHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHH
Confidence            35689999999999999     9999999999999999999999999999999999999986    4553        58


Q ss_pred             HHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          113 IDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       113 v~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |..+++.+++|+++.+. .+.. .+......+...++.|+|+|||++|+||
T Consensus        87 v~~~~~~l~~~a~~~~~-~g~~-~~~~~~~~~~~~~~~~~P~GVV~~I~p~  135 (427)
T 1o20_A           87 IDEMIKACETVIGLKDP-VGEV-IDSWVREDGLRIARVRVPIGPIGIIYES  135 (427)
T ss_dssp             HHHHHHHHHHHHHSCCC-TTCE-EEEEECTTSCEEEEEEEECCCEEEECCS
T ss_pred             HHHHHHHHHHHHhcccc-cCcc-ccccccCCCceeEEEeecceeEEEEecC
Confidence            99999999999998765 3331 0111001245578999999999999998

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=99.70  E-value=5.2e-17  Score=133.67  Aligned_cols=111  Identities=18%  Similarity=0.215  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HhH
Q 031230           46 AEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE----EAV--------WDI  113 (163)
Q Consensus        46 ~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~----~a~--------~ev  113 (163)
                      .++++.|++.|++||+     .|+.++..+|.++|.+++++|++|+++|+.+++.|+||+..    ++.        .|+
T Consensus        25 ~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v   99 (444)
T 4ghk_A           25 DQYMTDVGRRARRASR-----SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKAL   99 (444)
T ss_dssp             HHHHHHHHHHHHHHHH-----HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHH
T ss_pred             HHHHHHHHHHHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHH
Confidence            5799999999999999     99999999999999999999999999999999999999853    444        378


Q ss_pred             HHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          114 DDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       114 ~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ..+++.+++++.+.+.. +.. .+......+...++.|+|+|||++|+||
T Consensus       100 ~~~~~~l~~~a~~~~~~-g~~-~~~~~~~~~~~~~~~~~P~GVV~~I~p~  147 (444)
T 4ghk_A          100 KTMVEGLRQVATLPDPI-GEM-SNLKYRPSGIQVGQMRVPLGVIGIIYES  147 (444)
T ss_dssp             HHHHHHHHHHHHSCCCT-TCE-EEEEECTTSCEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHhhcccc-Ccc-CCcccCCCCccceEEEeccEEEEEEeCC
Confidence            99999999999887543 321 1111111356789999999999999999

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=99.70  E-value=1.4e-17  Score=137.79  Aligned_cols=111  Identities=15%  Similarity=0.164  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHH-HhHHH-HHHHHH
Q 031230           48 DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL----EEAV-WDIDD-VAGCFE  121 (163)
Q Consensus        48 ~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~----~~a~-~ev~~-~i~~l~  121 (163)
                      .+++|+++|++||+     .|+.++..+|.++|.+++++|++|+++|+.+++.|+|||.    .++. .|+.. +++.++
T Consensus        15 ~~~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~   89 (468)
T 1vlu_A           15 SSQQIAKNARKAGN-----ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFE   89 (468)
T ss_dssp             HHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHH
T ss_pred             hHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHH
Confidence            57899999999999     9999999999999999999999999999999999999998    8885 79999 999999


Q ss_pred             HHHHhhhhhcccccc---ccCCC-C-CCceeEEEEeccceEEEEccC
Q 031230          122 YYADLAEGLDAKQKA---PVSLP-M-ENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       122 ~~a~~~~~~~~~~~~---~~~~~-~-~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++.++++......   ..+.. . .+...++.|+|+|||++|+||
T Consensus        90 ~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pw  136 (468)
T 1vlu_A           90 VMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFES  136 (468)
T ss_dssp             HHHHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESS
T ss_pred             HHHHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEecc
Confidence            999999887632110   01110 0 245678999999999999999

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=99.69  E-value=6.5e-17  Score=133.72  Aligned_cols=114  Identities=16%  Similarity=0.101  Sum_probs=91.6

Q ss_pred             eEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHH
Q 031230           39 GDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVA  117 (163)
Q Consensus        39 ~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i  117 (163)
                      ..++.++.++++.+++.|++||+     .|+.++.++|.++|.+++++|++|+++|+.+++.|+|||..++.. +...++
T Consensus         4 ~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~   78 (464)
T 3k9d_A            4 EDKDLRSIQEVRNLIESANKAQK-----ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFAS   78 (464)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHH
Confidence            34566788999999999999999     999999999999999999999999999999999999999988764 555566


Q ss_pred             HHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          118 GCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       118 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +.+.++++..+ ..+.    ... ..+...++.++|+|||++|+||
T Consensus        79 ~~~~~~~~~~~-~~g~----~~~-~~~~~~~~~~~P~GVv~~I~P~  118 (464)
T 3k9d_A           79 KHVYNYIKDMK-TIGM----LKE-DNEKKVMEVAVPLGVVAGLIPS  118 (464)
T ss_dssp             HHHHHHHTTCC-CSEE----EEE-ETTTTEEEEEEECCEEEEEECS
T ss_pred             HHHHHhhhccc-ccce----ecc-CCCceeEEEEecceEEEEECCC
Confidence            65554444321 1111    111 1356688999999999999999

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	163
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-34
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-33
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-31
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	3e-30
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-28
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	2e-27
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	9e-25
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	1e-23
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-23
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	1e-12

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  123 bits (310), Expect = 2e-34
 Identities = 61/168 (36%), Positives = 83/168 (49%), Gaps = 14/168 (8%)

Query: 4   AIPIPSR-------QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAA 56
           A+P P++       Q+FIN EW + V +K  P VNP+T E++  +     EDV+ AV AA
Sbjct: 1   AVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAA 60

Query: 57  RQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL-EEAVWDIDD 115
           R A     G  W     + R + L  +A  I   ++ LA LET+D GKP     + D+D 
Sbjct: 61  RAAF--QLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 118

Query: 116 VAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           V  C  YYA  A+    K          +F SY   EP+GV G I PW
Sbjct: 119 VLKCLRYYAGWAD----KYHGKTIPIDGDFFSYTRHEPVGVCGQIIPW 162

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  120 bits (302), Expect = 2e-33
 Identities = 49/153 (32%), Positives = 68/153 (44%), Gaps = 5/153 (3%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           ++FIN EW   V  K+ P+ NP TEE + ++     EDV+ AV AARQA     G  W +
Sbjct: 15  KIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAF--QIGSPWRT 72

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
              + R + L  +A  I   +  LA +E ++ GK    A             Y     G 
Sbjct: 73  MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRY---CAGW 129

Query: 131 DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             K +        NF +Y   EP+GV G I PW
Sbjct: 130 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPW 162

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  114 bits (285), Expect = 4e-31
 Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 9/155 (5%)

Query: 11  QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSS 70
           + ++NGEW+    +  I I  P +   +G +PA + E+V+    +A++A        W +
Sbjct: 5   KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQ-----PAWRA 57

Query: 71  ASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGL 130
            S   RA YL  +A  +   K ++  + + +  K  + AV ++   A    Y A+    +
Sbjct: 58  LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM 117

Query: 131 --DAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
             +  +        +   + V +EP+G+V  I+P+
Sbjct: 118 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPF 152

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  112 bits (280), Expect = 3e-30
 Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 8/154 (5%)

Query: 10  RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
            +L INGE       ++ P+ NP T +++ +I  A+AE V+ AV AA  A       +W 
Sbjct: 3   HKLLINGELVSGE-GEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAF-----AEWG 56

Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129
             +   RA+ L  +A  I E     A LE+ +CGKPL  A  D          +      
Sbjct: 57  QTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFA--GA 114

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
                       +E   S + ++P+GVV  I PW
Sbjct: 115 ARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPW 148

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score =  107 bits (267), Expect = 2e-28
 Identities = 26/145 (17%), Positives = 47/145 (32%), Gaps = 11/145 (7%)

Query: 25  KRIPIVNPTTEEIVGD-IPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAI 83
                 N  T E +    P  T  +V  A  AA +       +D+   + + RA  LR I
Sbjct: 3   NVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVA-----RDFRRLNNSKRASLLRTI 57

Query: 84  AAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD-----AKQKAPV 138
           A+++  R  ++     ++   P      +I   A     +AD+               P 
Sbjct: 58  ASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPT 117

Query: 139 SLPMENFKSYVLKEPIGVVGLITPW 163
             P+        +  +G V +    
Sbjct: 118 RAPLPKPDIRRQQIALGPVAVFGAS 142

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  104 bits (260), Expect = 2e-27
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 6/117 (5%)

Query: 7   IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGK 66
           +P    ++ GEW      + I + +P     +  + + + E+VE  +D   +        
Sbjct: 14  VPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKR----GRW 67

Query: 67  DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYY 123
                 G  R   LR  A  I       A +  ++ GKP   AV ++          
Sbjct: 68  SARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLA 124

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score = 96.7 bits (240), Expect = 9e-25
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 4   AIPIPSRQLFINGEWREPVLKKRI-PIVNPTTEEIVGDIPAATAEDVELAVDAARQALSR 62
           ++ +     +  G   +        P+  P T  ++  +    AE+V+ AV +A+ A   
Sbjct: 14  SVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAY-- 71

Query: 63  NKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122
                WS  +G  R++ +   A  I ER+  +A LE I+ GK + EA +DID    C EY
Sbjct: 72  ---LKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEY 128

Query: 123 Y 123
           Y
Sbjct: 129 Y 129

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 93.8 bits (232), Expect = 1e-23
 Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 10/154 (6%)

Query: 11  QLFINGEWREPVLKKRIPIVNP-TTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS 69
            L+I GEW +   K+R+  +NP    E+VG    A   + E A++AA +A      K W 
Sbjct: 39  PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAF-----KTWK 91

Query: 70  SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129
                 R++ L   AA +  RK EL      + GK   EA  D+ +     EYYA  A  
Sbjct: 92  DWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAA-- 149

Query: 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           L  +  A   +P     +     P+G   +I PW
Sbjct: 150 LRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPW 183

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 93.1 bits (230), Expect = 2e-23
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 6/116 (5%)

Query: 49  VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108
           +   V  AR+A          + S  FR + L A+   I E    ++     D GK    
Sbjct: 2   ISDTVKRAREAF-----NSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWT 56

Query: 109 AVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163
           + + ++  V    +            +    +   +    Y+  EP+GVV +I  W
Sbjct: 57  SYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAW 112

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 62.0 bits (149), Expect = 1e-12
 Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 17/94 (18%)

Query: 47  EDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL 106
           +++       R+A          +A+   + K ++ IA K+ ER+ E+     ID  K  
Sbjct: 1   DELLEKAKKVREAW-----DVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKAR 55

Query: 107 EEAVWD------------IDDVAGCFEYYADLAE 128
           E  V +            ID++    E    L +
Sbjct: 56  ERGVKESLVDRLALNDKRIDEMIKACETVIGLKD 89

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	163
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	99.97
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	99.97
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	99.97
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	99.96
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	99.96
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	99.96
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	99.95
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	99.94
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	99.84
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	99.63
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	98.95

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=99.97  E-value=3e-30  Score=213.49  Aligned_cols=147  Identities=32%  Similarity=0.543  Sum_probs=134.3

Q ss_pred             CCccceeCceEecCCCCCee-eeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRI-PIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK   86 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~-~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~   86 (163)
                      ....+||||+|+.+.++.++ +|+||+||+++++++.++.+||++||++|++||+     .|++++..+|+++|.+++++
T Consensus        18 ~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~-----~W~~~s~~eR~~iL~~~a~~   92 (503)
T d1a4sa_          18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL-----KWSKMAGIERSRVMLEAARI   92 (503)
T ss_dssp             CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHH
Confidence            34578999999998776665 6999999999999999999999999999999999     99999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |++|+++|+.+++.|+|||+.++..|+..+++.++|++....+..+..   .... .+...++.|+|+|||++|+||
T Consensus        93 L~~~~eela~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~p~  165 (503)
T d1a4sa_          93 IRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQH---IQLP-GGAFAYTRREPLGVCAGILAW  165 (503)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEE---EECG-GGCEEEEEEEECSEEEEECCS
T ss_pred             HHHhHHHHHHHHHHhhhhcchhhhhhhhhhhhcccccccccccccccc---cccC-CCcccccccccceeeecccCC
Confidence            999999999999999999999999999999999999999998877764   2222 466789999999999999999

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.97  E-value=5.4e-30  Score=211.49  Aligned_cols=150  Identities=33%  Similarity=0.600  Sum_probs=135.2

Q ss_pred             CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      .+.++||||+|+.+.++.+++++||+||+++++++.++.+|++.||++|++||..+  ..|+.++.++|+++|.+++++|
T Consensus        12 ~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~--~~W~~~s~~eR~~iL~kia~~L   89 (494)
T d1bxsa_          12 KYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIG--SPWRTMDASERGRLLNKLADLI   89 (494)
T ss_dssp             CCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTT--SHHHHSCHHHHHHHHHHHHHHH
T ss_pred             CcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhcc--chhhcCCHHHHHHHHHHHHHHH
Confidence            34589999999998888999999999999999999999999999999999999621  1599999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|+++|+.+++.|+|||..++. .|+..+++.+++++.+.+++.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        90 ~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~Pw  162 (494)
T d1bxsa_          90 ERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT---IPMD-GNFFTYTRSEPVGVCGQIIPW  162 (494)
T ss_dssp             HHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEE---ECCS-SSEEEEEEEEECCEEEEECCS
T ss_pred             HhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhccee---ecCC-CCceeEEEEccEEEEEEEeCc
Confidence            99999999999999999999875 599999999999999998887763   2333 467789999999999999999

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.97  E-value=5.9e-30  Score=211.28  Aligned_cols=148  Identities=39%  Similarity=0.694  Sum_probs=134.6

Q ss_pred             ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230           10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE   89 (163)
Q Consensus        10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~   89 (163)
                      .++||||+|+.+.++.+++++||+||+++++++.++.+|++.||++|++||..+  ..|++++..+|.++|.++++.|++
T Consensus        14 ~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~--~~W~~~~~~eRa~iL~~~a~~l~~   91 (494)
T d1o04a_          14 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLG--SPWRRMDASHRGRLLNRLADLIER   91 (494)
T ss_dssp             CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTT--SHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhcc--chhhcCCHHHHHHHHHHHHHHHHH
Confidence            588999999998888999999999999999999999999999999999999621  149999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           90 RKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        90 ~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |+++|+.++++|+|||..++. .|+..+++.++|++.+..++.+..   .+.. .+...++.|+|+|||++|+||
T Consensus        92 ~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~P~  162 (494)
T d1o04a_          92 DRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT---IPID-GDFFSYTRHEPVGVCGQIIPW  162 (494)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE---ECCS-SSEEEEEEEEECCEEEEECCS
T ss_pred             hHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCce---eccC-CCceeEEEEecccEEEEECCc
Confidence            999999999999999999986 599999999999999999887764   2333 466789999999999999999

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=2.6e-29  Score=206.42  Aligned_cols=146  Identities=34%  Similarity=0.589  Sum_probs=126.8

Q ss_pred             CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT   88 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~   88 (163)
                      .+++||||+|+.+ +++.++++||+||+++++++.++.+|++.|+++|++||+     .|+++|..+|.++|.+++++|+
T Consensus         2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~-----~W~~~~~~~R~~iL~~~a~~l~   75 (474)
T d1wnda_           2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA-----EWGQTTPKVRAECLLKLADVIE   75 (474)
T ss_dssp             CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHH
Confidence            4689999999977 568899999999999999999999999999999999999     9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           89 ERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        89 ~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      +|+++|+++++.|+|||+.++.. ++......++|++..........   .+....+...++.|+|+|||++|+||
T Consensus        76 ~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~p~  148 (474)
T d1wnda_          76 ENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLA---AGEYLEGHTSMIRRDPLGVVASIAPW  148 (474)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEEC---BEEEETTEEEEEEEEECSEEEEECCS
T ss_pred             hCHHHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccc---cccccCCcceEEEEecccceEEEeec
Confidence            99999999999999999999976 56666666666666655444332   22223567889999999999999999

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=99.96  E-value=3.7e-29  Score=206.68  Aligned_cols=150  Identities=21%  Similarity=0.293  Sum_probs=133.3

Q ss_pred             CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      +.+++||||+|+.  ++.+++++||.||+.+++++.++.+||++|+++|++++++    .|+.+|..+|+++|.+++++|
T Consensus        15 ~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~----~w~~~~~~~R~~iL~~~a~~l   88 (499)
T d1ky8a_          15 PVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW----SARDMPGTERLAVLRKAADII   88 (499)
T ss_dssp             EEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH----HHHHSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchh----hhhcCCHHHHHHHHHHHHHHH
Confidence            3478999999985  4688999999999999999999999999999999888873    599999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccc-cCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAP-VSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|+++|+.++++|+|||..++..||..+++.++|++..++++.+..... ......+...++.|+|+|||++|+||
T Consensus        89 ~~~~~~la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~  165 (499)
T d1ky8a_          89 ERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPF  165 (499)
T ss_dssp             HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCS
T ss_pred             HHhHHHHHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccc
Confidence            99999999999999999999999999999999999999998877653211 12223456789999999999999999

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=2.8e-28  Score=202.12  Aligned_cols=146  Identities=29%  Similarity=0.456  Sum_probs=131.9

Q ss_pred             CccceeCceEecCCCCCeeeeecCC-CCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            9 SRQLFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         9 ~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      .+++||||+|+.+  +..++++||. ||+++++++.++.+|+++|+++|++||+     .|+.+|..+|.++|.+++++|
T Consensus        37 ~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~-----~W~~~s~~~R~~iL~~~a~~l  109 (516)
T d1uzba_          37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK-----TWKDWPQEDRSRLLLKAAALM  109 (516)
T ss_dssp             EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHH
Confidence            3689999999975  4678899985 7999999999999999999999999999     999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ++|+++|+.+++.|+|||..++..|+..+++.+++++..+..+.+...  ...+..+...++.|+|+|||++|+||
T Consensus       110 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~P~Gvv~~I~Pw  183 (516)
T d1uzba_         110 RRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAV--EVVPYPGEDNESFYVPLGAGVVIAPW  183 (516)
T ss_dssp             HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCC--CCCCCTTEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhccc--ccccccccceeEEeeccCcccccccc
Confidence            999999999999999999999999999999999999999888776531  22233466788999999999999999

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=99.95  E-value=6.1e-28  Score=197.86  Aligned_cols=149  Identities=23%  Similarity=0.418  Sum_probs=131.7

Q ss_pred             CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230            8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI   87 (163)
Q Consensus         8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l   87 (163)
                      +.+++||||+|+.+  +..++++||.||+.+++++.++.+||+.|+++|++||+     .|+.+|.++|.++|.+++++|
T Consensus         2 k~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~-----~W~~~s~~~R~~iL~~~a~~L   74 (474)
T d1euha_           2 KQYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP-----AWRALSYIERAAYLHKVADIL   74 (474)
T ss_dssp             CBCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHH
T ss_pred             ccccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH-----HHhhCCHHHHHHHHHHHHHHH
Confidence            45799999999864  57899999999999999999999999999999999999     999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccc--cCCCCCCceeEEEEeccceEEEEccC
Q 031230           88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAP--VSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus        88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+|+++|+.++++|+|||..++..|+...++.+++++.............  .+....+...+++|+|+|||++|+||
T Consensus        75 ~~~~~~la~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~  152 (474)
T d1euha_          75 MRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPF  152 (474)
T ss_dssp             HHTHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCT
T ss_pred             HHhHHHHHHHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccc
Confidence            99999999999999999999999999999999999998876655432111  11222456678999999999999998

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=99.94  E-value=4.1e-26  Score=188.52  Aligned_cols=135  Identities=20%  Similarity=0.253  Sum_probs=120.2

Q ss_pred             CCeeeeecCCCCCeee-EecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 031230           24 KKRIPIVNPTTEEIVG-DIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDC  102 (163)
Q Consensus        24 ~~~~~v~~P~tg~~~~-~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~  102 (163)
                      +++|+++||+||+.++ .++.++.+||++|+++|++||+     .|++++..+|.++|.+++++|++|+++|+.+++.|+
T Consensus         2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~-----~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~   76 (504)
T d1ez0a_           2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR-----DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET   76 (504)
T ss_dssp             CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH-----HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5689999999999997 7999999999999999999999     999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhHHHHHHHHHHHHHhhhhhcccccc-----ccCCCCCCceeEEEEeccceEEEEccC
Q 031230          103 GKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKA-----PVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       103 Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      |||..++..||..+++.++||++.+++.......     +...+..+...++.++|+|||++|+||
T Consensus        77 Gkp~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~Pw  142 (504)
T d1ez0a_          77 ALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGAS  142 (504)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecc
Confidence            9999999999999999999999998876554211     111222345678999999999999999

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=1.5e-20  Score=152.83  Aligned_cols=110  Identities=21%  Similarity=0.252  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhh
Q 031230           49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLA  127 (163)
Q Consensus        49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~  127 (163)
                      |++||+.|++||.     .|+.+|.++|.++|++++++|++|+++|+++++.|+|||..++. .|+..+++.++++++++
T Consensus         2 v~~av~~Ar~Af~-----~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~   76 (446)
T d1ad3a_           2 ISDTVKRAREAFN-----SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKEL   76 (446)
T ss_dssp             HHHHHHHHHHHHH-----TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6899999999999     99999999999999999999999999999999999999999996 59999999999999998


Q ss_pred             hhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          128 EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ..+.............+...++.|+|+|||++|+||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~  112 (446)
T d1ad3a_          77 PDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAW  112 (446)
T ss_dssp             HHHHSCEECCCCSTTTTSEEEEEEEECSEEEEECCS
T ss_pred             HHhhcccccccCCCCCCcceEEEeecceeEeccccc
Confidence            877665433233333566789999999999999999

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.63  E-value=8.8e-17  Score=129.06  Aligned_cols=108  Identities=19%  Similarity=0.195  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHh------------HH
Q 031230           47 EDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWD------------ID  114 (163)
Q Consensus        47 ~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~e------------v~  114 (163)
                      +|+.++++.|++||+     .|+++|..+|.++|.+++++|++|+++|+++++.|+||+..++..|            +.
T Consensus         1 ee~~~a~~~A~~Af~-----~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~   75 (414)
T d1o20a_           1 DELLEKAKKVREAWD-----VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRID   75 (414)
T ss_dssp             CHHHHHHHHHHHHHH-----HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHH
T ss_pred             CHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHH
Confidence            478999999999999     9999999999999999999999999999999999999999876444            56


Q ss_pred             HHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          115 DVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       115 ~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      .+++.+++++.......+..   .... ......+.++|+||+++|+||
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~gv~~~~~p~  120 (414)
T d1o20a_          76 EMIKACETVIGLKDPVGEVI---DSWV-REDGLRIARVRVPIGPIGIIY  120 (414)
T ss_dssp             HHHHHHHHHHHSCCCTTCEE---EEEE-CTTSCEEEEEEEECCCEEEEC
T ss_pred             HHHHHHHHHHHhhhhccccc---cccc-cccccceeecccccccccccc
Confidence            67888888888766554442   1111 234457788999999999998

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.95  E-value=3.2e-09  Score=85.13  Aligned_cols=109  Identities=15%  Similarity=0.148  Sum_probs=76.1

Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCHHHH----H--H-hHH
Q 031230           48 DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANL------ETIDCGKPLEEA----V--W-DID  114 (163)
Q Consensus        48 ~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~------~~~e~Gkp~~~a----~--~-ev~  114 (163)
                      .++++++.|++||+     .|+.++.++|.++|.++++.|++|+++|+++      ...+.|.+...-    .  . .+.
T Consensus         4 ~~e~~~~~Ak~A~~-----~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~   78 (436)
T d1vlua_           4 SSQQIAKNARKAGN-----ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFE   78 (436)
T ss_dssp             HHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHH
T ss_pred             HHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHH
Confidence            46788999999999     9999999999999999999999999999874      345556553221    1  1 255


Q ss_pred             HHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230          115 DVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW  163 (163)
Q Consensus       115 ~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw  163 (163)
                      ..++.++..++..+...... .....+ .+...+..+.|+|||++|.+|
T Consensus        79 ~~~~~l~~i~~~~dpvg~~~-~~~~~~-~gl~~~~~~~P~GVigiI~e~  125 (436)
T d1vlua_          79 VMLQGIKDVAELEDPVGKVK-MARELD-DGLTLYQVTAPVGVLLVIFES  125 (436)
T ss_dssp             HHHHHHHHHHHSCCSSSCEE-EEEEEE-TTEEEEEEEEECCEEEEEESS
T ss_pred             HHHHHHHHHHhccccceeEe-eeeecc-ccceEEEeeeeeeeeeccccc
Confidence            56666766665433221110 000112 466778899999999999543