Citrus Sinensis ID: 031450

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MTSIIPGHQFNWSVGVEEHHLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHISGCGPIFCSAVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVGVDDSTFSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQGNCEP
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mtsiipghqfnwsvgveehhlhrarfnkiipysryfgsnfpykglfsshdkhisgcgpifcsavddgndpddgsgddtsnkkespkdengvnseLLRENLErivgvddstfsgLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQGNCEP
Flexible Loop (DISEMBL)
mtsiipghqfnwsVGVEEHHLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHISGCGPIFCSAVDDGNDPDDGSgddtsnkkespkdengvnselLRENLErivgvddstfsglDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQGNCEP
Low Complexity Region (SEG)
MTSIIPGHQFNWSVGVEEHHLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHISGCGPIFCSAVddgndpddgsgddTSNKKESPKDENGVNSELLRENLERIVGVDDSTFSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQGNCEP
Disordered region (IsUnstruct)
****IPGHQFNWSVGVEEHHLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHISGCGPIFCSAV**********************************NLERIVGVDDSTFSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYME******
Disordered Region (DISOPRED)
*********FNWSVGVEE*H***ARFNKIIPYSRYFGSNFPYKGLFSS**************************************************************FSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQG****
Disordered Region (DISEMBL)
MTSIIPGHQFNWSVGVEEHHLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHISGCGPIFCSAVDDGN***********************NSELLRENLERIVGVDDSTFSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQGNCEP
Disordered Region (DISPRO)
********QFNWSVGVEEHHLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHISGCGPIFCSAVDD***************************ELLRENLERIVGVDDSTFSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQGNC**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTSIIPGHQFNWSVGVEEHHLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHISGCGPIFCSAVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVGVDDSTFSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQGNCEP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
297738248	265	unnamed protein product [Vitis vinifera]	0.924	0.554	0.590	9e-39
225425067	223	PREDICTED: uncharacterized protein LOC10	0.924	0.659	0.590	1e-38
224109022	233	predicted protein [Populus trichocarpa]	0.955	0.652	0.562	5e-38
255635111	223	unknown [Glycine max]	0.911	0.650	0.578	4e-36
449445336	250	PREDICTED: uncharacterized protein LOC10	0.880	0.56	0.532	8e-35
351721007	191	uncharacterized protein LOC100306367 [Gl	0.911	0.759	0.552	1e-34
255546634	243	conserved hypothetical protein [Ricinus	0.911	0.596	0.534	3e-32
388505906	222	unknown [Lotus japonicus]	0.893	0.639	0.490	5e-30
297834926	223	hypothetical protein ARALYDRAFT_479508 [	0.924	0.659	0.469	1e-25
255638798	167	unknown [Glycine max]	0.792	0.754	0.518	2e-23

>gi|297738248|emb|CBI27449.3| unnamed protein product [Vitis vinifera]

 Score =  164 bits (416), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 95/161 (59%), Positives = 112/161 (69%), Gaps = 14/161 (8%)

Query: 3   SIIPGHQFNWSVGVEEHHLHRARFNKII-PYSRYFGSNFPYKGLFSSHDKHISG------ 55
           +++ G+  N  +G++ +H  R RFN+II P S   G   P +G F  H + ++G      
Sbjct: 44  TMLSGNHCNLWLGIQ-NHPSRGRFNQIICPGS---GPYIPSRGSFFYHGQCLAGSSHQSA 99

Query: 56  --CGPIFCSAVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVGVDDSTFSG 113
             C PIF S VDDG DPDD S D    K+ S  +  GVNSE++RENLERIVG DDSTFSG
Sbjct: 100 RRCRPIFSSTVDDGMDPDD-SEDGIDKKQPSNGELGGVNSEMIRENLERIVGSDDSTFSG 158

Query: 114 LDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 154
           LDLATLIR KYGRSYDV LIKKEFMGRNLLALNVMWKYMEQ
Sbjct: 159 LDLATLIRNKYGRSYDVLLIKKEFMGRNLLALNVMWKYMEQ 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425067|ref|XP_002271912.1| PREDICTED: uncharacterized protein LOC100247903 [Vitis vinifera]

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/161 (59%), Positives = 112/161 (69%), Gaps = 14/161 (8%)

Query: 3   SIIPGHQFNWSVGVEEHHLHRARFNKII-PYSRYFGSNFPYKGLFSSHDKHISG------ 55
           +++ G+  N  +G++ +H  R RFN+II P S   G   P +G F  H + ++G      
Sbjct: 2   TMLSGNHCNLWLGIQ-NHPSRGRFNQIICPGS---GPYIPSRGSFFYHGQCLAGSSHQSA 57

Query: 56  --CGPIFCSAVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVGVDDSTFSG 113
             C PIF S VDDG DPDD S D    K+ S  +  GVNSE++RENLERIVG DDSTFSG
Sbjct: 58  RRCRPIFSSTVDDGMDPDD-SEDGIDKKQPSNGELGGVNSEMIRENLERIVGSDDSTFSG 116

Query: 114 LDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 154
           LDLATLIR KYGRSYDV LIKKEFMGRNLLALNVMWKYMEQ
Sbjct: 117 LDLATLIRNKYGRSYDVLLIKKEFMGRNLLALNVMWKYMEQ 157

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109022|ref|XP_002315054.1| predicted protein [Populus trichocarpa] gi|222864094|gb|EEF01225.1| predicted protein [Populus trichocarpa]

 Score =  162 bits (410), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/169 (56%), Positives = 109/169 (64%), Gaps = 17/169 (10%)

Query: 1   MTSIIPGHQFNWSVG---VEEHHLHRARF--NKIIPYSRYFGSNFPYKGLFSSHDKHI-- 53
           M+SI+ GH  NWS+G   V+EH L R RF  NK+       G   P +GL  S  + +  
Sbjct: 1   MSSIVSGHHCNWSLGGAGVQEHFLCRGRFYSNKVPCPGDNHG--LPCRGLIFSTPQSLAS 58

Query: 54  SGC--------GPIFCSAVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVG 105
           S C         P+F S VDD  D DD   D   +K  S  +  G++SELLRENLERIVG
Sbjct: 59  SSCYRPSTRKYRPVFSSTVDDPRDQDDPEEDGARDKDSSKGETGGIDSELLRENLERIVG 118

Query: 106 VDDSTFSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 154
            DDS FSG+DLATLIR KYGRSYDVQLIKKEFMGRNLLALNVMWKY EQ
Sbjct: 119 SDDSAFSGIDLATLIRNKYGRSYDVQLIKKEFMGRNLLALNVMWKYREQ 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255635111|gb|ACU17913.1| unknown [Glycine max]

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/152 (57%), Positives = 104/152 (68%), Gaps = 7/152 (4%)

Query: 4   IIPGHQFNWSVGVEEHHLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHIS-GCGPIFCS 62
           I+  HQ +W V +++H   +   NK  P+SR  GS F   G  +    H +  C PIF S
Sbjct: 3   IMSTHQCSWPVRIQDHP-DKGSINKA-PFSR--GSEFLNVGYHAQKYGHSARKCRPIFAS 58

Query: 63  AVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVGVDDSTFSGLDLATLIRK 122
           +V +  DP D   DDT  KK    +  GVNSE+LRE+LE+IVG DDSTFSG DLATLIR 
Sbjct: 59  SVSNSMDPSDS--DDTDKKKPQNGEMGGVNSEMLRESLEKIVGEDDSTFSGFDLATLIRN 116

Query: 123 KYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 154
           KYGRSYDVQLIKKEFMGRNLLA+NVMWKYMEQ
Sbjct: 117 KYGRSYDVQLIKKEFMGRNLLAMNVMWKYMEQ 148

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445336|ref|XP_004140429.1| PREDICTED: uncharacterized protein LOC101207332 [Cucumis sativus]

 Score =  151 bits (382), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/167 (53%), Positives = 108/167 (64%), Gaps = 27/167 (16%)

Query: 1   MTSIIPGHQFNWS--VGVEEHHLHRARFNKI--IPYSRYFGSNFPYKGLFSSHDKHISGC 56
           MTS+  GHQ NWS  +G++EH L R + +++   P+        P     + H  H++ C
Sbjct: 32  MTSVTFGHQSNWSPGIGIQEH-LGRTKISRVDCCPF-------LPS----THHGNHVAYC 79

Query: 57  G--------PIFCSAVDDGNDPDDGSGDDTSNKKESPKDEN-GVNSELLRENLERIVGVD 107
                    P+F  ++D   DPDD   D   N  ESPK EN G+N E+LRENLER VG D
Sbjct: 80  RRRTGRQLRPVFAGSIDGAMDPDDP--DHRINDSESPKTENEGMNFEMLRENLERSVGTD 137

Query: 108 DSTFSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 154
           DS FSG+DLATLIR KYG+SYDVQLIKKEFMGRNLLALNVMWKY EQ
Sbjct: 138 DSRFSGIDLATLIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQ 184

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721007|ref|NP_001237707.1| uncharacterized protein LOC100306367 [Glycine max] gi|255628319|gb|ACU14504.1| unknown [Glycine max]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/152 (55%), Positives = 104/152 (68%), Gaps = 7/152 (4%)

Query: 4   IIPGHQFNWSVGVEEHHLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHIS-GCGPIFCS 62
           I+   Q +W V +++H   +   N+  P+SR  GS+F   G  +    H +  C P+F S
Sbjct: 3   IMSTRQCSWPVRIQDHP-DKGSINRA-PFSR--GSDFLNVGYHTQKYGHSARKCRPVFSS 58

Query: 63  AVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVGVDDSTFSGLDLATLIRK 122
           +V +  DP D   D+T  KK    +  GVNSE+LRE+LE+IVG DDSTFSG DLATLIR 
Sbjct: 59  SVSNSTDPSDS--DNTDKKKPQNGEMGGVNSEMLRESLEKIVGKDDSTFSGFDLATLIRN 116

Query: 123 KYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 154
           KYGRSYDVQLIKKEFMGRNLLA+NVMWKYMEQ
Sbjct: 117 KYGRSYDVQLIKKEFMGRNLLAMNVMWKYMEQ 148

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546634|ref|XP_002514376.1| conserved hypothetical protein [Ricinus communis] gi|223546473|gb|EEF47972.1| conserved hypothetical protein [Ricinus communis]

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/159 (53%), Positives = 102/159 (64%), Gaps = 14/159 (8%)

Query: 1   MTSIIPGHQFNWSVGVE-EHHLHRARF----NKIIPYSRYFGSNFPYKGLFSSHDKHISG 55
           M+SII     N SVG   + HL R R+    N  +P  R   + F  + L     +    
Sbjct: 1   MSSIISSQHCNLSVGAHHQDHLCRGRYYNCNNNKLPCFRCSYAQFSCRLLSVRKSR---- 56

Query: 56  CGPIFCSAVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVGVDDSTFSGLD 115
             P+F + VD  N+ +D S D+  N+  S  D  GV+SE+LR NLERIVG DDS FSG+D
Sbjct: 57  -PPVFSTPVD--NNVNDESEDE--NEDTSKDDVGGVDSEILRRNLERIVGTDDSAFSGID 111

Query: 116 LATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 154
           LATLIR KYGRSYDVQLIKKEFMGRNLLALNVMW+YMEQ
Sbjct: 112 LATLIRNKYGRSYDVQLIKKEFMGRNLLALNVMWRYMEQ 150

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505906|gb|AFK41019.1| unknown [Lotus japonicus]

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/163 (49%), Positives = 101/163 (61%), Gaps = 21/163 (12%)

Query: 4   IIPGHQFNWSVGVEEH----HLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHISG---- 55
           I+  HQ  W + V ++    ++H+A      P+  Y G+    +GL S +  +++G    
Sbjct: 3   IMSTHQCGWPLRVPDNPDRGNIHKA------PFPGYTGTYSTSRGLDSRNVGYLAGKCHH 56

Query: 56  ----CGPIFCSAVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVGVDDSTF 111
               C P+F S V D  DP D    D +  +    DE+   S+ LRE+LE+IVG DDS F
Sbjct: 57  NARKCRPVFSSLVSDSLDPYDSDDKDKNIPQNGEIDEH---SKKLRESLEKIVGTDDSAF 113

Query: 112 SGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 154
           SG DLATLIR KYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ
Sbjct: 114 SGFDLATLIRNKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 156

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297834926|ref|XP_002885345.1| hypothetical protein ARALYDRAFT_479508 [Arabidopsis lyrata subsp. lyrata] gi|297331185|gb|EFH61604.1| hypothetical protein ARALYDRAFT_479508 [Arabidopsis lyrata subsp. lyrata]

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 94/164 (57%), Gaps = 17/164 (10%)

Query: 1   MTSIIPGHQFNWSVGVEEHHLHRARFNKI--IPYSRYFGSNFPYKGLFS-SHDKHISGCG 57
           M SI+  H       + E    R     I  +  SRY G  F  +  FS S     + CG
Sbjct: 1   MMSIVSSHHHCQPSVIHE----RCSIGTISKVSCSRYCGPCFSGRLAFSHSLCLKTTTCG 56

Query: 58  PI-------FCSAVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVGVDDST 110
                     CS VDD  +PD+   DD + +    K +   N ++ R NLER+VG DDS 
Sbjct: 57  KTARRRFSRICSIVDDEMNPDNS--DDEAKESLDDKTKRQAN-DMNRANLERMVGSDDSA 113

Query: 111 FSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 154
           F+GLDLATLIR+KYG+SYDVQLIKKEFMGRNLLA+NVMWKY EQ
Sbjct: 114 FNGLDLATLIRQKYGKSYDVQLIKKEFMGRNLLAMNVMWKYREQ 157

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638798|gb|ACU19703.1| unknown [Glycine max]

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/133 (51%), Positives = 84/133 (63%), Gaps = 7/133 (5%)

Query: 4   IIPGHQFNWSVGVEEHHLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHIS-GCGPIFCS 62
           I+  HQ +W   +++H   +   NK  P+SR  GS F   G  +    H +  C PIF S
Sbjct: 3   IMSTHQCSWPARIQDH-PDKGSINKA-PFSR--GSEFLNVGYHAQKYGHSARKCRPIFAS 58

Query: 63  AVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVGVDDSTFSGLDLATLIRK 122
           +V +  DP D   DDT  KK    +  GVNSE+LRE+LE+IVG DDSTFSG DLATLIR 
Sbjct: 59  SVSNSMDPSDS--DDTDKKKPQNGEMGGVNSEMLRESLEKIVGEDDSTFSGFDLATLIRN 116

Query: 123 KYGRSYDVQLIKK 135
           KYGRSYDVQLIKK
Sbjct: 117 KYGRSYDVQLIKK 129

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
TAIR|locus:2092261	222	AT3G19900 "AT3G19900" [Arabido	0.465	0.333	0.693	2.1e-22

TAIR|locus:2092261 AT3G19900 "AT3G19900" [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 52/75 (69%), Positives = 63/75 (84%)

Query:    81 KKESPKDENGVNS-ELLRENLERIVGVDDSTFSGLDLATLIRKKYGRSYDVQLIKKEFMG 139
             +KES  D+    + ++ R NLER+VG DDS F+GLDLATLIR+KYG+SYDVQLIKKEFMG
Sbjct:    82 EKESLDDKTKRQANDMNRANLERMVGSDDSAFNGLDLATLIRQKYGKSYDVQLIKKEFMG 141

Query:   140 RNLLALNVMWKYMEQ 154
             +NLLA+NVMWKY EQ
Sbjct:   142 KNLLAMNVMWKYREQ 156


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.137   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      159       146   0.00079  103 3  11 22  0.47    31
                                                     30  0.49    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  160 KB (2095 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.45u 0.15s 14.60t   Elapsed:  00:00:01
  Total cpu time:  14.45u 0.15s 14.60t   Elapsed:  00:00:01
  Start:  Sat May 11 02:32:29 2013   End:  Sat May 11 02:32:30 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_X1514	hypothetical protein (233 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	grail3.0063005001	hypothetical protein (186 aa)			•	•					0.550
	eugene3.00061626	hypothetical protein (259 aa)			•	•					0.517
	eugene3.00150423	SubName- Full=Putative uncharacterized protein; (206 aa)			•						0.506
	grail3.0089000701	hypothetical protein (311 aa)			•						0.505
	grail3.0025021301	hypothetical protein (173 aa)			•						0.505
	estExt_fgenesh4_pg.C_LG_II1804	SubName- Full=Putative uncharacterized protein; (127 aa)			•						0.504
	estExt_Genewise1_v1.C_LG_XIV2304	hypothetical protein (126 aa)			•						0.504
	estExt_Genewise1_v1.C_LG_XIII0363	hypothetical protein (158 aa)			•						0.504
	gw1.XII.99.1	hypothetical protein (203 aa)			•						0.503
	gw1.I.8641.1	annotation not avaliable (113 aa)			•						0.503

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	159
pfam11267	99	pfam11267, DUF3067, Protein of unknown function (D	9e-09

>gnl|CDD|204620 pfam11267, DUF3067, Protein of unknown function (DUF3067)

 Score = 50.0 bits (120), Expect = 9e-09
 Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 4/42 (9%)

Query: 113 GLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 154
           G +L  L+R ++G SYDVQL ++    R  + L VMWKY+EQ
Sbjct: 1   GDELHQLLRDRWGASYDVQLRRR----RGRIYLQVMWKYLEQ 38

This family of proteins has no known function. Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	159
PF11267	99	DUF3067: Protein of unknown function (DUF3067); In	99.87

>PF11267 DUF3067: Protein of unknown function (DUF3067); InterPro: IPR021420 This family of proteins has no known function

Probab=99.87  E-value=3.7e-23  Score=155.24  Aligned_cols=42  Identities=52%  Similarity=0.936  Sum_probs=38.4

Q ss_pred             HHHHHHHHHHHhCcccceEEEEEeecCcceeehhhhHhhhhcCCCC
Q 031450          113 GLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQGNCE  158 (159)
Q Consensus       113 G~EL~~Ll~~KWGrSYDVQL~rrd~~Gk~~l~lQVMWkYLEQ~SFP  158 (159)
                      |+||++||++|||+||||||+|+    +.+|||||||+||||+|||
T Consensus         1 g~eL~~ll~~KwG~sYDvql~r~----~~~v~lqVMW~yLeQ~SFP   42 (99)
T PF11267_consen    1 GQELRDLLREKWGRSYDVQLRRR----RGRVYLQVMWKYLEQRSFP   42 (99)
T ss_dssp             HHHHHHHHHHHHSS-EEEEEEEE----TTEEEEEEEEEETTSTT-S
T ss_pred             ChHHHHHHHHHhCCcceeEEEEE----cCEEEEEEehhhccCCCcC
Confidence            78999999999999999999999    5669999999999999999

; PDB: 2LJW_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	159
2ljw_A	110	ALR2454 protein; novel fold, structural genomics,	2e-13

>2ljw_A ALR2454 protein; novel fold, structural genomics, northeast structural genomi consortium, NESG, PSI-biology, protein structure initiative function; NMR {Nostoc SP} Length = 110

 Score = 61.8 bits (150), Expect = 2e-13
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)

Query: 112 SGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQ 154
           +G +L  L+  K+G SYDVQ  +     +  + L VMWKY+EQ
Sbjct: 2   TGQELRQLLLDKWGYSYDVQFRRT----QGKIFLQVMWKYLEQ 40

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	159
2ljw_A	110	ALR2454 protein; novel fold, structural genomics,	99.9

>2ljw_A ALR2454 protein; novel fold, structural genomics, northeast structural genomi consortium, NESG, PSI-biology, protein structure initiative function; NMR {Nostoc SP}

Probab=99.90  E-value=8.5e-25  Score=165.74  Aligned_cols=44  Identities=41%  Similarity=0.770  Sum_probs=42.0

Q ss_pred             ccHHHHHHHHHHHhCcccceEEEEEeecCcceeehhhhHhhhhcCCCC
Q 031450          111 FSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQGNCE  158 (159)
Q Consensus       111 mtG~EL~~Ll~~KWGrSYDVQL~rrd~~Gk~~l~lQVMWkYLEQ~SFP  158 (159)
                      |||+||++||++|||+||||||+|+    +++||||||||||||+|||
T Consensus         1 mtG~eL~~ll~~KWG~sYDvql~r~----~~~vylqVMW~yLeQ~SFP   44 (110)
T 2ljw_A            1 MTGQELRQLLLDKWGYSYDVQFRRT----QGKIFLQVMWKYLEQASFP   44 (110)
T ss_dssp             CCHHHHHHHHHHHHSSCEEEEEEEE----TTEEEEEEEEEETTSTTCS
T ss_pred             CCHHHHHHHHHHHhCCcceeEEEEE----CCEEEEEeehHhhccCCCC
Confidence            7999999999999999999999998    4569999999999999999

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00