Citrus Sinensis ID: 031701

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150----
Protein Sequence
MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNNLACHSFEVSVILAFITWLLIAVSSHVMFWILASV
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcHHHHHHHHHHHHHHHHcHHEEEHccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mkelvgspgtvsgLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRkrdlqnpvLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDlnfcrpqnnlachsFEVSVILAFITWLLIAVSSHVMFWILASV
Flexible Loop (DISEMBL)
mkelvgspgTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNNLACHSFEVSVILAFITWLLIAVSSHVMFWILASV
Low Complexity Region (SEG)
MKELVGSPGTVSGLMLRIgqcgfaaaaigamtsaagFSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRKRDLQNPVLVSLFVVGDWVTamlslaaacssagvvvlYAKDLNFCRPQNNLACHSFEVSVILAFITWLLIAVSSHVMFWILASV
Disordered region (IsUnstruct)
**********VSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNNLACHSFEVSVILAFITWLLIAVSSHVMFWILA**
Disordered Region (DISOPRED)
*****GSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNNLACHSFEVSVILAFITWLLIAVSSHVMFWILASV
Disordered Region (DISEMBL)
********GTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNNLACHSFEVSVILAFITWLLIAVSSHVMFWILASV
Disordered Region (DISPRO)
******SPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNNLACHSFEVSVILAFITWLLIAVSSHVMFWILASV
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNNLACHSFEVSVILAFITWLLIAVSSHVMFWILASV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	154	2.2.26 [Sep-21-2011]
Q945M8	154	CASP-like protein At3g538	yes	no	1.0	1.0	0.746	2e-62
Q9LZM5	152	CASP-like protein At5g020	no	no	0.980	0.993	0.668	2e-54
Q6K478	154	CASP-like protein Os09g02	yes	no	1.0	1.0	0.688	1e-53
B8BD96	154	CASP-like protein OsI_305	N/A	no	1.0	1.0	0.688	1e-53
B6T990	154	CASP-like protein 13 OS=Z	N/A	no	1.0	1.0	0.655	2e-51
Q5N794	153	CASP-like protein Os01g08	no	no	0.987	0.993	0.638	5e-48
B8AC36	153	CASP-like protein OsI_044	N/A	no	0.987	0.993	0.638	5e-48
Q0DHM7	155	CASP-like protein Os05g04	no	no	0.948	0.941	0.623	2e-46
B8AYU8	155	CASP-like protein OsI_201	N/A	no	0.948	0.941	0.623	2e-46
B6TAX2	154	CASP-like protein 18 OS=Z	N/A	no	0.993	0.993	0.614	1e-45

>sp|Q945M8|CSPLI_ARATH CASP-like protein At3g53850 OS=Arabidopsis thaliana GN=At3g53850 PE=2 SV=1

 Score =  237 bits (605), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 115/154 (74%), Positives = 132/154 (85%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MK+L+G PGTV GL+LRIGQC  AAA+IG M SA  FS +TAFCYLIASMGLQ+LWSFGL
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLD+YALR K+DLQNP+LVSLFVVGDWVTAMLSLAAACSSAGVVVLY KD+ +C  Q+ 
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
             C  +EV+V L+F+TW+ IAVSSHV FWILASV
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILASV 154

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZM5|CSPLU_ARATH CASP-like protein At5g02060 OS=Arabidopsis thaliana GN=At5g02060 PE=2 SV=1

 Score =  210 bits (535), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 101/151 (66%), Positives = 128/151 (84%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MK+++GSPGT+SGL+LR+GQC  AAA+IG M S+  FS+YTAFC+L+ASMGLQ++WSFGL
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLD+YA+RRK DL++P+L+SLF VGDWVTA+L+LAAACSSAGV VL+ KD  FCR Q  
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWIL 151
           L+C  F++SV L+F  W L A+SSH MFWIL
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

Arabidopsis thaliana (taxid: 3702)

>sp|Q6K478|CSPLQ_ORYSJ CASP-like protein Os09g0249400 OS=Oryza sativa subsp. japonica GN=Os09g0249400 PE=2 SV=1

 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 106/154 (68%), Positives = 129/154 (83%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MK++VGSPGT SG+ LR+ QC FA A++ AM SA GFS+YTAFCYLIASMGLQ+LWSFGL
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLDIY+L+ KRDL NPVLVSLFVVGDWVTA+LS AAA +SAGV +L+ +D++FCR    
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
           L+C  +E+SVILAFITW  IA S+  MFW+LAS+
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLASL 154

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B8BD96|CSPLQ_ORYSI CASP-like protein OsI_30532 OS=Oryza sativa subsp. indica GN=OsI_30532 PE=3 SV=1

 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 106/154 (68%), Positives = 129/154 (83%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MK++VGSPGT SG+ LR+ QC FA A++ AM SA GFS+YTAFCYLIASMGLQ+LWSFGL
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLDIY+L+ KRDL NPVLVSLFVVGDWVTA+LS AAA +SAGV +L+ +D++FCR    
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
           L+C  +E+SVILAFITW  IA S+  MFW+LAS+
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLASL 154

Oryza sativa subsp. indica (taxid: 39946)

>sp|B6T990|CSPLI_MAIZE CASP-like protein 13 OS=Zea mays PE=2 SV=1

 Score =  201 bits (510), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/154 (65%), Positives = 127/154 (82%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MK++VGSPGT SG+ LR+ QC  A A++GAM +A GFS+YTAFCYLIASMGLQ+LWSFGL
Sbjct: 1   MKDVVGSPGTWSGMALRLSQCVSAGASMGAMATAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLD+Y+L+ KRDL NPVLVSLFVVGDWVTA+LS AAA +SAGV +L+ +D++FCR    
Sbjct: 61  ACLDVYSLKTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
           L+C  + +SV+LAFITW  IA S+  MFW+L S+
Sbjct: 121 LSCGRYALSVVLAFITWSFIATSAVSMFWLLPSL 154

Zea mays (taxid: 4577)

>sp|Q5N794|CSPLR_ORYSJ CASP-like protein Os01g0847300 OS=Oryza sativa subsp. japonica GN=Os01g0847300 PE=2 SV=1

 Score =  189 bits (481), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 99/155 (63%), Positives = 123/155 (79%), Gaps = 3/155 (1%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           M+EL GSPGT SGL LR+GQ  FAAA++ A  SA GF++YTAFCYLIASMGLQ LWS GL
Sbjct: 1   MRELAGSPGTWSGLSLRVGQLVFAAASVCATASALGFAAYTAFCYLIASMGLQALWSLGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCR-PQN 119
           ACLD YAL+ K+DL + VL+SLFVVGDWVTA+LS AA+CS+AGVVVL+ +D+  CR PQ 
Sbjct: 61  ACLDCYALKFKKDLHSAVLLSLFVVGDWVTAILSFAASCSAAGVVVLFDRDIYACRNPQ- 119

Query: 120 NLACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
            L C  FE+++  AF++W   A S+ VMFW+LAS+
Sbjct: 120 -LPCGRFELAIACAFLSWAFSATSALVMFWLLASL 153

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B8AC36|CSPLR_ORYSI CASP-like protein OsI_04425 OS=Oryza sativa subsp. indica GN=OsI_04425 PE=2 SV=1

 Score =  189 bits (481), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 99/155 (63%), Positives = 123/155 (79%), Gaps = 3/155 (1%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           M+EL GSPGT SGL LR+GQ  FAAA++ A  SA GF++YTAFCYLIASMGLQ LWS GL
Sbjct: 1   MRELAGSPGTWSGLSLRVGQLVFAAASVCATASALGFAAYTAFCYLIASMGLQALWSLGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCR-PQN 119
           ACLD YAL+ K+DL + VL+SLFVVGDWVTA+LS AA+CS+AGVVVL+ +D+  CR PQ 
Sbjct: 61  ACLDCYALKFKKDLHSAVLLSLFVVGDWVTAILSFAASCSAAGVVVLFDRDIYACRNPQ- 119

Query: 120 NLACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
            L C  FE+++  AF++W   A S+ VMFW+LAS+
Sbjct: 120 -LPCGRFELAIACAFLSWAFSATSALVMFWLLASL 153

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q0DHM7|CSPLS_ORYSJ CASP-like protein Os05g0456500 OS=Oryza sativa subsp. japonica GN=Os05g0456500 PE=2 SV=1

 Score =  184 bits (468), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/146 (62%), Positives = 114/146 (78%)

Query: 8   PGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGLACLDIYA 67
           PGT  GL +R+GQ  FA A+IG M S AGF++YTAFCYLIASMGLQ LWS GLACLD+YA
Sbjct: 9   PGTWGGLAMRVGQVAFAGASIGVMASGAGFANYTAFCYLIASMGLQSLWSLGLACLDVYA 68

Query: 68  LRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNNLACHSFE 127
           L  KRDL N +LVSLFV+GDWVTA+LS AA+CS+ GV+VL+ +D+ FCR    L C  FE
Sbjct: 69  LTVKRDLNNALLVSLFVIGDWVTALLSFAASCSAGGVMVLFKRDVLFCRRYPQLPCGRFE 128

Query: 128 VSVILAFITWLLIAVSSHVMFWILAS 153
           ++V LAF++W L A S+ +MF +LA+
Sbjct: 129 LAVALAFLSWALSATSAIIMFCLLAA 154

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B8AYU8|CSPLS_ORYSI CASP-like protein OsI_20198 OS=Oryza sativa subsp. indica GN=OsI_20198 PE=3 SV=1

 Score =  184 bits (468), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/146 (62%), Positives = 114/146 (78%)

Query: 8   PGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGLACLDIYA 67
           PGT  GL +R+GQ  FA A+IG M S AGF++YTAFCYLIASMGLQ LWS GLACLD+YA
Sbjct: 9   PGTWGGLAMRVGQVAFAGASIGVMASGAGFANYTAFCYLIASMGLQSLWSLGLACLDVYA 68

Query: 68  LRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNNLACHSFE 127
           L  KRDL N +LVSLFV+GDWVTA+LS AA+CS+ GV+VL+ +D+ FCR    L C  FE
Sbjct: 69  LTVKRDLNNALLVSLFVIGDWVTALLSFAASCSAGGVMVLFKRDVLFCRRYPQLPCGRFE 128

Query: 128 VSVILAFITWLLIAVSSHVMFWILAS 153
           ++V LAF++W L A S+ +MF +LA+
Sbjct: 129 LAVALAFLSWALSATSAIIMFCLLAA 154

Oryza sativa subsp. indica (taxid: 39946)

>sp|B6TAX2|CSPLN_MAIZE CASP-like protein 18 OS=Zea mays PE=2 SV=1

 Score =  181 bits (460), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 94/153 (61%), Positives = 119/153 (77%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           M  L G PG+  GL+LR+GQ  FAAA IG M S+ GF+SYTAFCYLIASMGLQMLWSFGL
Sbjct: 1   MAGLAGRPGSWGGLVLRVGQALFAAACIGVMGSSLGFASYTAFCYLIASMGLQMLWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLD YA+R  +DL +P+L+SLFVVGDWVTA+LS AA+ S+AGVV+L+ KD+ FCR    
Sbjct: 61  ACLDGYAIRANKDLTSPILLSLFVVGDWVTAILSFAASSSAAGVVILFQKDVLFCRRYPQ 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILAS 153
           L C  +E++   AF++W L A S+ +MFW+LA+
Sbjct: 121 LPCGKYELATAFAFLSWALSATSALIMFWLLAA 153

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	154
255578003	154	conserved hypothetical protein [Ricinus	1.0	1.0	0.811	6e-69
224090797	154	predicted protein [Populus trichocarpa]	1.0	1.0	0.805	8e-68
225440474	154	PREDICTED: CASP-like protein At3g53850 [	1.0	1.0	0.792	1e-65
356504242	155	PREDICTED: CASP-like protein At3g53850-l	1.0	0.993	0.746	5e-62
351734376	155	uncharacterized protein LOC100306188 [Gl	1.0	0.993	0.733	2e-61
357469255	155	hypothetical protein MTR_4g021340 [Medic	1.0	0.993	0.733	4e-61
449448606	155	PREDICTED: CASP-like protein At3g53850-l	0.980	0.974	0.754	5e-61
18409932	154	uncharacterized protein [Arabidopsis tha	1.0	1.0	0.746	9e-61
297820120	154	hypothetical protein ARALYDRAFT_485778 [	1.0	1.0	0.746	2e-60
388521395	154	unknown [Lotus japonicus]	0.993	0.993	0.718	1e-59

>gi|255578003|ref|XP_002529873.1| conserved hypothetical protein [Ricinus communis] gi|223530649|gb|EEF32523.1| conserved hypothetical protein [Ricinus communis]

 Score =  265 bits (676), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 125/154 (81%), Positives = 144/154 (93%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MKEL+GSPGTVSGL+LRIGQC  AAA+I  M SA GFSSYTAFCYLIASMGLQ+LWSFGL
Sbjct: 1   MKELIGSPGTVSGLVLRIGQCALAAASISIMASARGFSSYTAFCYLIASMGLQVLWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLD+YALRRKRDLQNPVLVSLFVVGDWVT+MLSLAAACSSAGVVVLYA+DLNFC+ +++
Sbjct: 61  ACLDVYALRRKRDLQNPVLVSLFVVGDWVTSMLSLAAACSSAGVVVLYARDLNFCKLESD 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
           L C+ +E+S++LAF+TWLLI +SSHVMFWILAS+
Sbjct: 121 LPCNKYEISILLAFLTWLLIGISSHVMFWILASI 154

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224090797|ref|XP_002309085.1| predicted protein [Populus trichocarpa] gi|222855061|gb|EEE92608.1| predicted protein [Populus trichocarpa]

 Score =  261 bits (666), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 124/154 (80%), Positives = 142/154 (92%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MKE++G PGTVSGL+LRIGQC FAAA+I  MTSA GFSSYT+FCYLIASMGLQ+LWSFGL
Sbjct: 1   MKEIIGGPGTVSGLLLRIGQCVFAAASISIMTSAIGFSSYTSFCYLIASMGLQLLWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLDIYALRRK+DLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYA+D+NFC+   +
Sbjct: 61  ACLDIYALRRKKDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYARDMNFCKIHPD 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
           L C  +E+S++LAFITWL +++SSHVMFWILASV
Sbjct: 121 LPCSRYEISILLAFITWLQVSISSHVMFWILASV 154

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440474|ref|XP_002272505.1| PREDICTED: CASP-like protein At3g53850 [Vitis vinifera] gi|297740318|emb|CBI30500.3| unnamed protein product [Vitis vinifera]

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 122/154 (79%), Positives = 139/154 (90%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MKEL+GSPGT SGL+LRIGQC FAAA+IG M SA GFS+YTAFCYLIASMGLQ+LWSFGL
Sbjct: 1   MKELIGSPGTASGLVLRIGQCMFAAASIGVMVSAIGFSNYTAFCYLIASMGLQVLWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLD+YAL+ KRDLQNPVLVSLFVVGDWVTA LSLAAACSSAGV+VLYA+DL+FCR + +
Sbjct: 61  ACLDVYALKIKRDLQNPVLVSLFVVGDWVTATLSLAAACSSAGVMVLYARDLDFCRAEMH 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
           + C  F++S+ LAFITW  IA+SSHVMFWILASV
Sbjct: 121 IPCSRFQISIALAFITWFFIAISSHVMFWILASV 154

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504242|ref|XP_003520906.1| PREDICTED: CASP-like protein At3g53850-like [Glycine max]

 Score =  241 bits (616), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 115/154 (74%), Positives = 132/154 (85%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MK L+G PGT+SG +LR GQC F AA+I  M ++ GFSSYTAFCYLIASMGLQ+LWSFGL
Sbjct: 2   MKRLLGGPGTISGFLLRFGQCAFGAASIAIMVTSFGFSSYTAFCYLIASMGLQVLWSFGL 61

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLDIYALRRKRDLQNP+LVSLFVVGDWVTA LSLAAACSSAG+VVLYA+DL  C     
Sbjct: 62  ACLDIYALRRKRDLQNPILVSLFVVGDWVTATLSLAAACSSAGIVVLYARDLTVCATSKR 121

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
           L C+ ++VSV +AF+TW+L A+SSHVMFWILASV
Sbjct: 122 LTCNRYQVSVAMAFLTWVLTAMSSHVMFWILASV 155

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351734376|ref|NP_001235139.1| uncharacterized protein LOC100306188 [Glycine max] gi|255627811|gb|ACU14250.1| unknown [Glycine max]

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 113/154 (73%), Positives = 132/154 (85%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MK L+G PGT+SG +LR GQC F AA+I  M ++ GFSSYTAFCYLIASMGLQ+LWSFGL
Sbjct: 2   MKRLLGGPGTISGFLLRFGQCAFGAASIAIMVTSFGFSSYTAFCYLIASMGLQVLWSFGL 61

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLDIYALRRKRDLQNP+LVSLFVVGDWVTA LSLAAACSSAG+VVLY +DL  C    +
Sbjct: 62  ACLDIYALRRKRDLQNPILVSLFVVGDWVTATLSLAAACSSAGIVVLYTRDLTACATSKH 121

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
           L C+ +++SV +AF+TW+L A+SSHVMFWILASV
Sbjct: 122 LTCNRYQISVAMAFVTWVLTAMSSHVMFWILASV 155

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357469255|ref|XP_003604912.1| hypothetical protein MTR_4g021340 [Medicago truncatula] gi|355505967|gb|AES87109.1| hypothetical protein MTR_4g021340 [Medicago truncatula] gi|388517079|gb|AFK46601.1| unknown [Medicago truncatula]

 Score =  239 bits (609), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 113/154 (73%), Positives = 132/154 (85%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           M+ L+G PGTVSG +LR+GQC F AA+I  M ++ GFS+YTAFCYL ASMGLQ+LWSFGL
Sbjct: 2   MQRLLGGPGTVSGFLLRLGQCAFGAASISVMVTSFGFSTYTAFCYLTASMGLQVLWSFGL 61

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLDIYALRRKRDLQNP+LVSLFVVGDWVTA+LSLAAACSSAGVVVLY +D++ C     
Sbjct: 62  ACLDIYALRRKRDLQNPILVSLFVVGDWVTAILSLAAACSSAGVVVLYTRDVDMCATHKI 121

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
           + CH ++VSV LAF+TW L A+SSHVMFWILASV
Sbjct: 122 IPCHRYQVSVALAFVTWALTAMSSHVMFWILASV 155

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448606|ref|XP_004142057.1| PREDICTED: CASP-like protein At3g53850-like [Cucumis sativus] gi|449519076|ref|XP_004166561.1| PREDICTED: CASP-like protein At3g53850-like [Cucumis sativus]

 Score =  238 bits (608), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 114/151 (75%), Positives = 130/151 (86%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MK L+G PGTVSGL LRIGQ  FAAA+IG M SA GFSS+TAFCYLIASMGLQ+LWSFGL
Sbjct: 1   MKHLIGKPGTVSGLALRIGQSAFAAASIGVMVSALGFSSFTAFCYLIASMGLQVLWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLD+YALRRKRDLQNP+LVSLFVVGDWVTA L+LAAA SSAG++ LYAKDL+ C+    
Sbjct: 61  ACLDMYALRRKRDLQNPILVSLFVVGDWVTATLTLAAASSSAGIIFLYAKDLDVCKFHKE 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWIL 151
           L C  F++S+ LAF+TW LIA+SSHVMFWIL
Sbjct: 121 LPCSMFQISIALAFVTWALIAMSSHVMFWIL 151

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18409932|ref|NP_566990.1| uncharacterized protein [Arabidopsis thaliana] gi|75164334|sp|Q945M8.1|CSPLI_ARATH RecName: Full=CASP-like protein At3g53850 gi|15724236|gb|AAL06511.1|AF412058_1 AT4g31460/F3L17_30 [Arabidopsis thaliana] gi|21464571|gb|AAM52240.1| AT4g31460/F3L17_30 [Arabidopsis thaliana] gi|332645629|gb|AEE79150.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  237 bits (605), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 115/154 (74%), Positives = 132/154 (85%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MK+L+G PGTV GL+LRIGQC  AAA+IG M SA  FS +TAFCYLIASMGLQ+LWSFGL
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLD+YALR K+DLQNP+LVSLFVVGDWVTAMLSLAAACSSAGVVVLY KD+ +C  Q+ 
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
             C  +EV+V L+F+TW+ IAVSSHV FWILASV
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILASV 154

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820120|ref|XP_002877943.1| hypothetical protein ARALYDRAFT_485778 [Arabidopsis lyrata subsp. lyrata] gi|297323781|gb|EFH54202.1| hypothetical protein ARALYDRAFT_485778 [Arabidopsis lyrata subsp. lyrata]

 Score =  236 bits (603), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 115/154 (74%), Positives = 131/154 (85%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MK+L G PGTV GL+LRIGQC  AAA+IG M SA  FS +TAFCYLIASMGLQ+LWSFGL
Sbjct: 1   MKKLFGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLD+YALR K+DLQNP+LVSLFVVGDWVTAMLSLAAACSSAGVVVLY KD+ +C  Q+ 
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
             C  +EV+V L+F+TW+ IAVSSHV FWILASV
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILASV 154

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521395|gb|AFK48759.1| unknown [Lotus japonicus]

 Score =  233 bits (595), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 110/153 (71%), Positives = 130/153 (84%)

Query: 1   MKELVGSPGTVSGLMLRIGQCGFAAAAIGAMTSAAGFSSYTAFCYLIASMGLQMLWSFGL 60
           MK L+G PGTVSG +LR+GQC F AA+IG M +A GFS+YTAFCYLIASMGLQ+LWS GL
Sbjct: 1   MKHLLGGPGTVSGCLLRVGQCAFGAASIGLMVTAFGFSTYTAFCYLIASMGLQVLWSLGL 60

Query: 61  ACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLNFCRPQNN 120
           ACLDIYALR+KRDLQNP+LVSLFVVGDWVT+ LSLAAACSSAG+VVLY +DL+ C  +  
Sbjct: 61  ACLDIYALRKKRDLQNPILVSLFVVGDWVTSTLSLAAACSSAGIVVLYTRDLDLCATRKG 120

Query: 121 LACHSFEVSVILAFITWLLIAVSSHVMFWILAS 153
             C+ +++SV +AFITW   A+SSHVMFWILAS
Sbjct: 121 NPCNRYQISVAMAFITWFFTAMSSHVMFWILAS 153

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	154
TAIR|locus:2084445	154	AT3G53850 "AT3G53850" [Arabido	1.0	1.0	0.564	2.2e-43
TAIR|locus:2185103	152	AT5G02060 "AT5G02060" [Arabido	0.980	0.993	0.509	7.5e-41
TAIR|locus:2086258	152	AT3G23200 "AT3G23200" [Arabido	0.980	0.993	0.464	2.6e-31
TAIR|locus:2057497	179	AT2G28370 "AT2G28370" [Arabido	0.974	0.837	0.418	2e-24
TAIR|locus:2061743	180	AT2G37200 "AT2G37200" [Arabido	0.967	0.827	0.333	8.3e-19
TAIR|locus:504956317	152	AT1G49405 "AT1G49405" [Arabido	0.980	0.993	0.285	7.7e-16
TAIR|locus:2077962	154	AT3G50810 "AT3G50810" [Arabido	0.980	0.980	0.277	4.1e-10
TAIR|locus:1006230287	152	AT4G37235 "AT4G37235" [Arabido	0.954	0.967	0.243	3.8e-07

TAIR|locus:2084445 AT3G53850 "AT3G53850" [Arabidopsis thaliana (taxid:3702)]

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 87/154 (56%), Positives = 103/154 (66%)

Query:     1 MKELVGSPGTVSGLMLRIXXXXXXXXXXXXXXXXXXFSSYTAFCYLIASMGLQMLWSFGL 60
             MK+L+G PGTV GL+LRI                  FS +TAFCYLIASMGLQ+LWSFGL
Sbjct:     1 MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query:    61 ACLDIYALRRKRDLQNPVLVSLFVVGDWVTXXXXXXXXXXXXXXXXXYAKDLNFCRPQNN 120
             ACLD+YALR K+DLQNP+LVSLFVVGDWVT                 Y KD+ +C  Q+ 
Sbjct:    61 ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query:   121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
               C  +EV+V L+F+TW+ IAVSSHV FWILASV
Sbjct:   121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILASV 154

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2185103 AT5G02060 "AT5G02060" [Arabidopsis thaliana (taxid:3702)]

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 77/151 (50%), Positives = 100/151 (66%)

Query:     1 MKELVGSPGTVSGLMLRIXXXXXXXXXXXXXXXXXXFSSYTAFCYLIASMGLQMLWSFGL 60
             MK+++GSPGT+SGL+LR+                  FS+YTAFC+L+ASMGLQ++WSFGL
Sbjct:     1 MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query:    61 ACLDIYALRRKRDLQNPVLVSLFVVGDWVTXXXXXXXXXXXXXXXXXYAKDLNFCRPQNN 120
             ACLD+YA+RRK DL++P+L+SLF VGDWVT                 + KD  FCR Q  
Sbjct:    61 ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query:   121 LACHSFEVSVILAFITWLLIAVSSHVMFWIL 151
             L+C  F++SV L+F  W L A+SSH MFWIL
Sbjct:   121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2086258 AT3G23200 "AT3G23200" [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 71/153 (46%), Positives = 91/153 (59%)

Query:     1 MKELVGSPGTVSGLMLRIXXXXXXXXXXXXXXXXXXFSSYTAFCYLIASMGLQMLWSFGL 60
             M ++ G+PGT++GL+LRI                  F S+TAFCYLIA+MGLQ++WSFGL
Sbjct:     1 MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query:    61 ACLDIYALRRKRDLQNPVLVSLFVVGDWVTXXXXXXXXXXXXXXXXXYAKDLNFCRPQNN 120
             A LD +AL RK+ L +PVLVSLFVVGDWVT                 Y  DL  C  +  
Sbjct:    61 AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query:   121 LACHSFEVSVILAFITWLLIAVSSHVMFWILAS 153
               C  +++SV LAF+ W+ IAVSS    W+LAS
Sbjct:   121 --CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2057497 AT2G28370 "AT2G28370" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 64/153 (41%), Positives = 75/153 (49%)

Query:     1 MKELVGSPGTVSGLMLRIXXXXXXXXXXXXXXXXXXFSSYTAFCYLIASMGLQMLWSFGL 60
             M ++ G PGT+ GL LR                   F S TAFCYL+A+ GLQ LWS  L
Sbjct:    29 MDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 88

Query:    61 ACLDIYALRRKRDLQNPVLVSLFVVGDWVTXXXXXXXXXXXXXXXXXYAKDLNFCRPQNN 120
             A +D+YA+  KR LQN  LVSLF +GD VT                    DLN C  QN+
Sbjct:    89 AMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCA-QNH 147

Query:   121 LACHSFEVSVILAFITWLLIAVSSHVMFWILAS 153
               C  FE S  LAFI+W     S    FW LAS
Sbjct:   148 --CVQFETSTALAFISWFAALPSFLFNFWSLAS 178

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2061743 AT2G37200 "AT2G37200" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 51/153 (33%), Positives = 71/153 (46%)

Query:     1 MKELVGSPGTVSGLMLRIXXXXXXXXXXXXXXXXXXFSSYTAFCYLIASMGLQMLWSFGL 60
             MK++ G PGT  GL+LR+                  F S TAFC L+ ++ LQ LWS  L
Sbjct:    31 MKDVQGMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCCLVLAVSLQSLWSLSL 90

Query:    61 ACLDIYALRRKRDLQNPVLVSLFVVGDWVTXXXXXXXXXXXXXXXXXYAKDLNFCRPQNN 120
               +D YAL  +R L+N  +V  F +GD VT                    DL  C   + 
Sbjct:    91 FIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGITVLI-NDLGQCNVNH- 148

Query:   121 LACHSFEVSVILAFITWLLIAVSSHVMFWILAS 153
               C  FE +  +AFI+W  ++ S  + FW LA+
Sbjct:   149 --CTRFETATAMAFISWFAVSPSFILNFWSLAT 179

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:504956317 AT1G49405 "AT1G49405" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 44/154 (28%), Positives = 67/154 (43%)

Query:     1 MKELVGSPGTVSGLMLRIXXXXXXXXXXXXXXXXXXFSSYTAFCYLIASMGLQMLWSFGL 60
             M E+ GS GT + L LR+                  F  +TAFCYL+  M L + W+  L
Sbjct:     1 MVEVPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTL 60

Query:    61 ACLDIYALRRKRDLQNPVLVSLFVVGDWVTXXXXXXXXXXXXXXXXXYAKDLNFCRPQNN 120
             A +DIY +  ++  Q P ++    +GDWV                     + + C P   
Sbjct:    61 AMVDIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVDILRSNESSCPPT-- 118

Query:   121 LACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
               C+ ++ +  LAF+TW L   SS    W+L S+
Sbjct:   119 -ICNRYQFAATLAFLTWFLSLSSSLFNLWLLPSL 151

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2077962 AT3G50810 "AT3G50810" [Arabidopsis thaliana (taxid:3702)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 43/155 (27%), Positives = 61/155 (39%)

Query:     1 MKELVGSPGTVSGLMLRIXXXXXXXXXXXXXXXXXXFSSYTAFCYLIASMGLQMLWSFGL 60
             M+ + GS GT +   LR                   F  +T FCYL   M +   WS  L
Sbjct:     1 MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILL 60

Query:    61 ACLDIYALRRKRDLQNPVLVSLFVVGDWVTXXXXXXXXXXXXXXXXXYAK-DLNFCRPQN 119
             A  D Y++  K   Q   ++S+   GD+V                   A  D   C    
Sbjct:    61 ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKIC--DG 118

Query:   120 NLACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
             +L C  ++VS  LAF+ W L+  S+   FW L S+
Sbjct:   119 SL-CIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:1006230287 AT4G37235 "AT4G37235" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 38/156 (24%), Positives = 62/156 (39%)

Query:     1 MKELVGSPGTVSGLMLRIXXXXXXXXXXXXX--XXXXXFSSYTAFCYLIASMGLQMLWSF 58
             M     S GT S  +LR+                    F +YT FCYL+  MGL   WS 
Sbjct:     1 MVRTTASFGTSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSV 60

Query:    59 GLACLDIYALRRKRDLQNPVLVSLFVVGDWVTXXXXXXXXXXXXXXXXXYAKDLNFCRPQ 118
              LA ++ Y++  K+      ++S+ V GD+V                      ++    Q
Sbjct:    61 TLALMEAYSILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVAVLL---MDAGEKQ 117

Query:   119 NNLACHSFEVSVILAFITWLLIAVSSHVMFWILASV 154
                 C  +++S  +AF++  L   S+   F +L S+
Sbjct:   118 ----CDRYKLSATMAFLSSFLSFASTFFNFCLLPSL 149


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.140   0.454    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      154       119   0.00091  102 3  11 21  0.36    30
                                                     29  0.47    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  575 (61 KB)
  Total size of DFA:  134 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  9.08u 0.09s 9.17t   Elapsed:  00:00:22
  Total cpu time:  9.08u 0.09s 9.17t   Elapsed:  00:00:29
  Start:  Thu May  9 20:01:22 2013   End:  Thu May  9 20:01:51 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B6T990	CSPLI_MAIZE	No assigned EC number	0.6558	1.0	1.0	N/A	no
B8BD96	CSPLQ_ORYSI	No assigned EC number	0.6883	1.0	1.0	N/A	no
B6TAX2	CSPLN_MAIZE	No assigned EC number	0.6143	0.9935	0.9935	N/A	no
P0DI70	CSPL2_GINBI	No assigned EC number	0.5098	0.9740	0.8522	N/A	no
P0DI71	CSPL3_GINBI	No assigned EC number	0.6078	0.9740	0.8426	N/A	no
Q6K478	CSPLQ_ORYSJ	No assigned EC number	0.6883	1.0	1.0	yes	no
B8AC36	CSPLR_ORYSI	No assigned EC number	0.6387	0.9870	0.9934	N/A	no
B6TM88	CSPLJ_MAIZE	No assigned EC number	0.6103	1.0	1.0	N/A	no
P0DI69	CSPL1_GINBI	No assigned EC number	0.5032	0.9740	0.8474	N/A	no
D8QNI1	CSPLH_SELML	No assigned EC number	0.5228	0.9740	0.8522	N/A	no
B8AYU8	CSPLS_ORYSI	No assigned EC number	0.6232	0.9480	0.9419	N/A	no
Q945M8	CSPLI_ARATH	No assigned EC number	0.7467	1.0	1.0	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_VI000718 hypothetical protein (154 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	154
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	5e-21

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score = 82.8 bits (205), Expect = 5e-21
 Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 20/152 (13%)

Query: 6   GSPGTVSGLMLRIGQCGFAAAAIGAMTSA------------AGFSSYTAFCYLIASMGLQ 53
           G P  ++ L+LR+     A AA   M +             A FS   AF YL+ +  + 
Sbjct: 1   GRPLRLAELVLRLAAFVLALAAAVVMGTNKQTKPFFFIQKKASFSDLPAFRYLVVANAIA 60

Query: 54  MLWSFGLACLDIYALRRKRDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVL------ 107
             +S     L +Y L RK+  +   L  L  + D V A L LAAA ++A +V L      
Sbjct: 61  AGYSLLQLVLSVYLLSRKK-PRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGNS 119

Query: 108 YAKDLNFCRPQNNLACHSFEVSVILAFITWLL 139
           +A  +  C  Q    C+    SV L+F+ +LL
Sbjct: 120 HANWMKICN-QFGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	154
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	99.96
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	99.85
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.91

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=99.96  E-value=1.3e-28  Score=189.79  Aligned_cols=131  Identities=29%  Similarity=0.429  Sum_probs=122.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHhcCC------------CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 031701            7 SPGTVSGLMLRIGQCGFAAAAIGAMTSAAG------------FSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRKRDL   74 (154)
Q Consensus         7 ~pGt~~gL~LR~~q~~fa~~sl~~M~s~~~------------F~s~TaF~yLva~~~Lq~lwSl~la~~d~yall~k~~l   74 (154)
                      ++++..+++||+.|++++++|+.+|++++|            |+++++|+|+|+++++++.||+.|++.++|.+.+|| .
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~~~~~-~   79 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVFSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSLSRGK-L   79 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-C
Confidence            357789999999999999999999999998            999999999999999999999999999999999999 7


Q ss_pred             CCCceeeEeeehhHHHHHHHHhhhhhhhhhHHHhhccC------CCcCCCCcccchhHHHHHHHHHHHHHH
Q 031701           75 QNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDL------NFCRPQNNLACHSFEVSVILAFITWLL  139 (154)
Q Consensus        75 ~~~~~~~l~~vGD~v~a~L~~aAAcaaAgitvL~~~d~------~~C~~~~~~fC~~~~~s~amAFlsw~~  139 (154)
                      +++...++.+++||+.+||+++|++++++++.+.++|.      +.|..++ +||+|+++|++++|++|++
T Consensus        80 ~~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~-~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   80 RSKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFG-KFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             cccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchh-hHHHHHHHHHHHHHHHHHC
Confidence            77788888999999999999999999999999988884      4699887 8999999999999999974

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=99.85  E-value=3.9e-21  Score=150.76  Aligned_cols=132  Identities=20%  Similarity=0.235  Sum_probs=118.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhcCC--------------CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCce
Q 031701           14 LMLRIGQCGFAAAAIGAMTSAAG--------------FSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRKRDLQNPVL   79 (154)
Q Consensus        14 L~LR~~q~~fa~~sl~~M~s~~~--------------F~s~TaF~yLva~~~Lq~lwSl~la~~d~yall~k~~l~~~~~   79 (154)
                      +.||+..+.++++|..+|++++|              |+++.+|.|+|+++++.+.||+.+....+|.+.+++...   .
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~~~~---~   77 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRRVFF---K   77 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh---H
Confidence            57999999999999999999854              788999999999999999999999999999988777662   2


Q ss_pred             eeEeeehhHHHHHHHHhhhhhhhhhHHHhhccCC------CcCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 031701           80 VSLFVVGDWVTAMLSLAAACSSAGVVVLYAKDLN------FCRPQNNLACHSFEVSVILAFITWLLIAVSSHVMFW  149 (154)
Q Consensus        80 ~~l~~vGD~v~a~L~~aAAcaaAgitvL~~~d~~------~C~~~~~~fC~~~~~s~amAFlsw~~~a~S~l~~~w  149 (154)
                      .++.++|||+++||+++|++|+++++++.++|.+      .|.+.+ +||+|...|++++|+++++.+.+++++-.
T Consensus        78 ~~~~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~-~FC~~~~~sl~~s~~a~v~~~llsv~Sa~  152 (154)
T TIGR01569        78 LIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFG-KFCDRIAGSLALSLFAVILLVLLSILSAI  152 (154)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5668999999999999999999999999988854      587776 89999999999999999999999998753

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.91  E-value=3.8e-08  Score=72.66  Aligned_cols=132  Identities=23%  Similarity=0.188  Sum_probs=97.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhcC------CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCceeeEeee
Q 031701           12 SGLMLRIGQCGFAAAAIGAMTSAA------GFSSYTAFCYLIASMGLQMLWSFGLACLDIYALRRKRDLQNPVLVSLFVV   85 (154)
Q Consensus        12 ~gL~LR~~q~~fa~~sl~~M~s~~------~F~s~TaF~yLva~~~Lq~lwSl~la~~d~yall~k~~l~~~~~~~l~~v   85 (154)
                      -...+|+.|++++.+.+..++...      ..+..++.-|.+++.++..++++...+.+.+.  .|+..+ .......++
T Consensus         5 ~~~ilR~lq~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~~~~~-~~~~~~~~~   81 (144)
T PF01284_consen    5 PSGILRILQLVFALIIFGLVASSIATGSQIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFS--LKYRPR-IPWPLVEFI   81 (144)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH--Hhcccc-cccchhHHH
Confidence            356899999999999999998776      35667788899999999999999999999988  222222 222223578


Q ss_pred             hhHHHHHHHHhhhhhhhhhHHHhhcc--CCCcCCCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 031701           86 GDWVTAMLSLAAACSSAGVVVLYAKD--LNFCRPQNNLACHSFEVSVILAFITWLLIAVSSHV  146 (154)
Q Consensus        86 GD~v~a~L~~aAAcaaAgitvL~~~d--~~~C~~~~~~fC~~~~~s~amAFlsw~~~a~S~l~  146 (154)
                      .|.+.+.+-+++++..+--..-.+.+  .+...++...-|+..+++.+++|++|++-..|..+
T Consensus        82 ~~~v~~il~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~l  144 (144)
T PF01284_consen   82 FDAVFAILWLAAFIALAAYLSDHSCSNTGNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAVL  144 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHC
Confidence            89999999999888776443222211  12222233345999999999999999999888753

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00