Citrus Sinensis ID: 031774

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHccccEEEEEEEcccccEEEEEEEcccccccccccccccccccccccEEEEEEccccccccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEccccccccEEEEEEcccccEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
EEEcccHHHHHHHHHHccccEEEEEEEEccccEEEEEEEcccHHHccccHHHHHHHHcccccEEEEEEEccHHHccccccccccccccccEEEEEEEcccHHHHHHHHHHcccEEEEccccccccccEEEEcccccEEEEEcccHHHHHcccc
Coil and Loop (DISEMBL)
mfrikdpkvsLDFYSRVLGMSLlkrldfpemkFSLYFLgyedtasapadpvdrtvwtfgkpatielthnwgtesdpdfkgyhngnseprgfghigiTVDDVYKACERFERLGvefakkpdggklkgvafikdpddywiEIFDlktigkiggst
Flexible Loop (DISEMBL)
mfrikdpkvsldfYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELthnwgtesdPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLgvefakkpdggklkgvafikdpddywIEIFdlktigkiggst
Low Complexity Region (SEG)
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Disordered region (IsUnstruct)
********VSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES***FKGYH*****PRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI****
Disordered Region (DISOPRED)
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTAS*********VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF************
Disordered Region (DISEMBL)
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Disordered Region (DISPRO)
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT**K*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	153	2.2.26 [Sep-21-2011]
O04885	185	Lactoylglutathione lyase	N/A	no	0.993	0.821	0.842	3e-75
O49818	186	Lactoylglutathione lyase	N/A	no	0.973	0.801	0.852	2e-74
Q9ZS21	185	Lactoylglutathione lyase	no	no	0.973	0.805	0.832	2e-73
Q42891	185	Lactoylglutathione lyase	N/A	no	1.0	0.827	0.816	3e-72
Q8H0V3	185	Lactoylglutathione lyase	no	no	0.960	0.794	0.877	5e-70
Q9CPU0	184	Lactoylglutathione lyase	yes	no	0.967	0.804	0.671	4e-56
Q6P7Q4	184	Lactoylglutathione lyase	yes	no	0.967	0.804	0.657	6e-56
Q4R5F2	184	Lactoylglutathione lyase	N/A	no	0.967	0.804	0.617	1e-52
Q04760	184	Lactoylglutathione lyase	yes	no	0.921	0.766	0.647	3e-52
Q9HU72	176	Lactoylglutathione lyase	yes	no	0.960	0.835	0.573	5e-43

>sp|O04885|LGUL_BRAJU Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1

 Score =  280 bits (715), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 128/152 (84%), Positives = 140/152 (92%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG+
Sbjct: 32  MFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFGR 91

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
           PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE+LGVEF KKP 
Sbjct: 92  PATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFVKKPH 151

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 152
            GK+K +AFIKDPD YWIEIFDLKTIG   G+
Sbjct: 152 DGKMKNIAFIKDPDGYWIEIFDLKTIGTTAGN 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Brassica juncea (taxid: 3707)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|O49818|LGUL_CICAR Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1

 Score =  276 bits (707), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 138/149 (92%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT  AP++PVDRTVWTF +
Sbjct: 33  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQ 92

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDD YKACERF+ LGVEF KKPD
Sbjct: 93  KATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPD 152

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AFIKDPD YWIE+FD KTIG +
Sbjct: 153 DGKMKGIAFIKDPDGYWIELFDRKTIGNV 181

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Cicer arietinum (taxid: 3827)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ZS21|LGUL_SOYBN Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1

 Score =  274 bits (700), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 124/149 (83%), Positives = 138/149 (92%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYE+TA AP++P+D+ VWTF +
Sbjct: 32  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPIDKVVWTFSQ 91

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            ATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDD YKACERF+ LGVEF KKP+
Sbjct: 92  KATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDTYKACERFQNLGVEFVKKPE 151

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AFIKDPD YWIEIFD KTIG +
Sbjct: 152 DGKMKGIAFIKDPDGYWIEIFDRKTIGNV 180

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Active toward the hemithioacetal adducts formed by reacting methylglyoxal or phenylglyoxal with glutathione, homoglutathione or gamma-glutamylcysteine, showing no preference for homoglutathione adducts over glutathione adducts.

Glycine max (taxid: 3847)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q42891|LGUL_SOLLC Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1

 Score =  270 bits (689), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 125/153 (81%), Positives = 137/153 (89%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFRIKDPKVSL+FYS+VLGMSLLKRLDFPEMKFSLYF+GYEDTASAP+DPV+RT WTF +
Sbjct: 32  MFRIKDPKVSLEFYSKVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSDPVERTAWTFSQ 91

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            +T+ELTHNWGTESDP+F GYHNGNSEPRGFGHIG+TVDDVYKACERFE LGVEF KKP 
Sbjct: 92  KSTLELTHNWGTESDPNFTGYHNGNSEPRGFGHIGVTVDDVYKACERFESLGVEFVKKPL 151

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST 153
            GK+KG+AFIKDPD YWIEIFD K I    GS 
Sbjct: 152 DGKMKGIAFIKDPDGYWIEIFDTKIIKDAAGSA 184

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Solanum lycopersicum (taxid: 4081)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8H0V3|LGUL_ARATH Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1

 Score =  262 bits (670), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 129/147 (87%), Positives = 138/147 (93%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFRIKDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT +AP DP +RTVWTFG+
Sbjct: 32  MFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQ 91

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
           PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE LGVEFAKKP+
Sbjct: 92  PATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPN 151

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIG 147
            GK+K +AFIKDPD YWIEIFDLKTIG
Sbjct: 152 DGKMKNIAFIKDPDGYWIEIFDLKTIG 178

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9CPU0|LGUL_MOUSE Lactoylglutathione lyase OS=Mus musculus GN=Glo1 PE=1 SV=3

 Score =  216 bits (550), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 100/149 (67%), Positives = 118/149 (79%), Gaps = 1/149 (0%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF +
Sbjct: 36  MLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSR 95

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD
Sbjct: 96  KATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD 154

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AFI+DPD YWIEI +   I  I
Sbjct: 155 DGKMKGLAFIQDPDGYWIEILNPNKIATI 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q6P7Q4|LGUL_RAT Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3

 Score =  215 bits (548), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 98/149 (65%), Positives = 118/149 (79%), Gaps = 1/149 (0%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  +RT W F +
Sbjct: 36  MLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFSR 95

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RFE LGV+F KKPD
Sbjct: 96  KATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVKKPD 154

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AF++DPD YWIEI +   +  I
Sbjct: 155 DGKMKGLAFVQDPDGYWIEILNPNKMATI 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q4R5F2|LGUL_MACFA Lactoylglutathione lyase OS=Macaca fascicularis GN=GLO1 PE=2 SV=3

 Score =  205 bits (521), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 92/149 (61%), Positives = 114/149 (76%), Gaps = 1/149 (0%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P D  ++  W   +
Sbjct: 36  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPAMKFSLYFLAYEDKNDIPKDKEEKIAWALSR 95

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DV+ AC+RFE LGV+F KKPD
Sbjct: 96  KATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVHSACKRFEELGVKFVKKPD 154

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AFI+DPD YWIEI +   +  +
Sbjct: 155 DGKMKGLAFIQDPDGYWIEILNPNKMATL 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Macaca fascicularis (taxid: 9541)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q04760|LGUL_HUMAN Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4

 Score =  203 bits (517), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 112/142 (78%), Gaps = 1/142 (0%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   +
Sbjct: 36  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 95

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD
Sbjct: 96  KATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD 154

Query: 121 GGKLKGVAFIKDPDDYWIEIFD 142
            GK+KG+AFI+DPD YWIEI +
Sbjct: 155 DGKMKGLAFIQDPDGYWIEILN 176

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9HU72|LGUL_PSEAE Lactoylglutathione lyase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gloA PE=3 SV=1

 Score =  172 bits (437), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 86/150 (57%), Positives = 102/150 (68%), Gaps = 3/150 (2%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFYSRVLGM LL+RLDF E +FSLYFL        P    +R  +TFG+
Sbjct: 28  MLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGR 87

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            + +ELTHNWG+ESD     YHNGN +PRGFGHI  +V D+  ACERFE LGV F K  D
Sbjct: 88  QSVLELTHNWGSESDD--SQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKPLD 145

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 150
            G +K VAFI DPD YW+EI      G++G
Sbjct: 146 RG-MKNVAFISDPDGYWVEIVQASLNGEMG 174

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
255565419	234	lactoylglutathione lyase, putative [Rici	0.993	0.649	0.875	3e-75
117203563	187	glyoxalase I [Arachis hypogaea]	0.993	0.812	0.842	9e-74
449459114	185	PREDICTED: lactoylglutathione lyase-like	0.973	0.805	0.879	9e-74
326514208	239	predicted protein [Hordeum vulgare subsp	1.0	0.640	0.836	1e-73
3334244	185	RecName: Full=Lactoylglutathione lyase;	0.993	0.821	0.842	2e-73
224104697	184	predicted protein [Populus trichocarpa]	0.993	0.826	0.875	4e-73
357167257	236	PREDICTED: lactoylglutathione lyase-like	0.973	0.631	0.852	6e-73
388516521	186	unknown [Medicago truncatula]	1.0	0.822	0.836	7e-73
297843598	235	calmodulin binding protein [Arabidopsis	0.960	0.625	0.870	8e-73
3334245	186	RecName: Full=Lactoylglutathione lyase;	0.973	0.801	0.852	1e-72

>gi|255565419|ref|XP_002523700.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223537004|gb|EEF38640.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 133/152 (87%), Positives = 142/152 (93%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M+RIKDPK SLDFYS VLGMSLLKRLDFPEMKFSLYF+GYE+TASAP DPV+RTVWTFG+
Sbjct: 81  MYRIKDPKQSLDFYSHVLGMSLLKRLDFPEMKFSLYFMGYENTASAPTDPVERTVWTFGQ 140

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF+ LGVEF KKP+
Sbjct: 141 KATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFKSLGVEFVKKPE 200

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 152
            GK+KG+AFIKDPD YWIEIFDLKTIGK  GS
Sbjct: 201 DGKMKGIAFIKDPDGYWIEIFDLKTIGKTTGS 232

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|117203563|gb|ABJ88950.2| glyoxalase I [Arachis hypogaea]

 Score =  281 bits (718), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 128/152 (84%), Positives = 141/152 (92%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG+
Sbjct: 32  MFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFGR 91

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
           PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE+LGVEF KKP+
Sbjct: 92  PATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFVKKPN 151

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 152
            GK+K +AFIKDPD YWIEIFDLKTIG   G+
Sbjct: 152 DGKMKNIAFIKDPDGYWIEIFDLKTIGTTAGN 183

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459114|ref|XP_004147291.1| PREDICTED: lactoylglutathione lyase-like [Cucumis sativus]

 Score =  280 bits (717), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 131/149 (87%), Positives = 140/149 (93%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M+RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDTASAP   VDRTVWTFG+
Sbjct: 32  MYRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPESSVDRTVWTFGR 91

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDD  KACERFERLGVEF KKPD
Sbjct: 92  KATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTIKACERFERLGVEFVKKPD 151

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AFIKDPD YWIEIFDLKT+GK+
Sbjct: 152 DGKMKGIAFIKDPDGYWIEIFDLKTVGKV 180

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326514208|dbj|BAJ92254.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  280 bits (717), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 128/153 (83%), Positives = 142/153 (92%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFR+KDPKVSLDFYSRV+GMSLLKRLDFPEMKFSLYFLGYED ++AP DPV RT WTFG+
Sbjct: 86  MFRVKDPKVSLDFYSRVMGMSLLKRLDFPEMKFSLYFLGYEDLSAAPVDPVQRTGWTFGQ 145

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            ATIELTHNWGTE+DP+FKGYHNGNS+PRGFGHIG+TVDDVYKACERFERLGVEF KKPD
Sbjct: 146 KATIELTHNWGTENDPEFKGYHNGNSDPRGFGHIGVTVDDVYKACERFERLGVEFVKKPD 205

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST 153
            GK+KG+AFIKDPD YWIEIFDLK IG++ G+ 
Sbjct: 206 DGKMKGIAFIKDPDGYWIEIFDLKRIGEVTGTA 238

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334244|sp|O04885.1|LGUL_BRAJU RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2113825|emb|CAA73691.1| Glyoxalase I [Brassica juncea]

 Score =  280 bits (715), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 128/152 (84%), Positives = 140/152 (92%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG+
Sbjct: 32  MFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFGR 91

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
           PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE+LGVEF KKP 
Sbjct: 92  PATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFVKKPH 151

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 152
            GK+K +AFIKDPD YWIEIFDLKTIG   G+
Sbjct: 152 DGKMKNIAFIKDPDGYWIEIFDLKTIGTTAGN 183

Source: Brassica juncea

Species: Brassica juncea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104697|ref|XP_002313532.1| predicted protein [Populus trichocarpa] gi|118481594|gb|ABK92739.1| unknown [Populus trichocarpa] gi|222849940|gb|EEE87487.1| predicted protein [Populus trichocarpa]

 Score =  278 bits (712), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 134/153 (87%), Positives = 141/153 (92%), Gaps = 1/153 (0%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED ASAP D V+RTVWTFG+
Sbjct: 32  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDHASAPGDSVERTVWTFGR 91

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            ATIELTHNWGTESDP+FK YHNGNSEPRGFGHIG+TVDD YKACERFERLGVEF KKP+
Sbjct: 92  KATIELTHNWGTESDPEFK-YHNGNSEPRGFGHIGVTVDDTYKACERFERLGVEFVKKPE 150

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST 153
            GK+KG+AFIKDPD YWIEIFDLKTIGKI  S 
Sbjct: 151 DGKMKGIAFIKDPDGYWIEIFDLKTIGKITESA 183

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357167257|ref|XP_003581076.1| PREDICTED: lactoylglutathione lyase-like [Brachypodium distachyon]

 Score =  278 bits (710), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 140/149 (93%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFR+KDPKVSLDFYSRV+GMSLLKRLDFP+MKFSLYFLGYED +SAPADPV RT WTFG+
Sbjct: 83  MFRVKDPKVSLDFYSRVMGMSLLKRLDFPDMKFSLYFLGYEDLSSAPADPVKRTGWTFGQ 142

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            AT+ELTHNWGTESDP+FKGYHNGNS+PRGFGHIG+TVDDVYKACERFERLGVEF KKPD
Sbjct: 143 KATLELTHNWGTESDPEFKGYHNGNSDPRGFGHIGVTVDDVYKACERFERLGVEFVKKPD 202

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AFIKDPD YWIEIFDL  IG++
Sbjct: 203 DGKMKGIAFIKDPDGYWIEIFDLTRIGEV 231

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516521|gb|AFK46322.1| unknown [Medicago truncatula]

 Score =  278 bits (710), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 128/153 (83%), Positives = 140/153 (91%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT+ AP++ VDRTVWTF +
Sbjct: 33  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTSEAPSNSVDRTVWTFAQ 92

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDD YKACERF+ LGVEF KKP+
Sbjct: 93  KATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPE 152

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST 153
            GK+KG+AFIKDPD YWIEIFD KTIG + GS 
Sbjct: 153 DGKMKGIAFIKDPDGYWIEIFDRKTIGNVTGSA 185

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843598|ref|XP_002889680.1| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata] gi|297335522|gb|EFH65939.1| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  277 bits (709), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 128/147 (87%), Positives = 137/147 (93%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFRIKDPK SLDFYS VLGMSLLKRLDF EMKFSLYFLGYEDT +APADP +RTVWTFG+
Sbjct: 82  MFRIKDPKASLDFYSHVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPADPTERTVWTFGR 141

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
           PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE LGVEF KKP+
Sbjct: 142 PATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFVKKPN 201

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIG 147
            GK+K +AFIKDPD YWIEIFDLKTIG
Sbjct: 202 DGKMKNIAFIKDPDGYWIEIFDLKTIG 228

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334245|sp|O49818.1|LGUL_CICAR RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2909424|emb|CAA12028.1| Glyoxalase I [Cicer arietinum]

 Score =  276 bits (707), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 138/149 (92%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT  AP++PVDRTVWTF +
Sbjct: 33  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQ 92

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDD YKACERF+ LGVEF KKPD
Sbjct: 93  KATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPD 152

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AFIKDPD YWIE+FD KTIG +
Sbjct: 153 DGKMKGIAFIKDPDGYWIELFDRKTIGNV 181

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
TAIR|locus:2205110	235	AT1G08110 [Arabidopsis thalian	0.960	0.625	0.877	2.9e-71
UNIPROTKB|F1N9Q2	190	GLO1 "Uncharacterized protein"	0.934	0.752	0.687	8.9e-54
MGI|MGI:95742	184	Glo1 "glyoxalase 1" [Mus muscu	0.967	0.804	0.671	1.1e-53
RGD|2702	184	Glo1 "glyoxalase 1" [Rattus no	0.921	0.766	0.683	1.9e-53
UNIPROTKB|Q5BL69	184	glo1 "Glyoxalase 1" [Xenopus (	0.941	0.782	0.671	1.3e-52
FB|FBgn0033162	176	CG1707 [Drosophila melanogaste	0.947	0.823	0.657	1.7e-52
UNIPROTKB|Q5EI50	149	Q5EI50 "GekBS101P" [Gekko japo	0.921	0.946	0.690	1.7e-52
ZFIN|ZDB-GENE-030722-9	180	glo1 "glyoxalase 1" [Danio rer	0.908	0.772	0.678	1.9e-51
UNIPROTKB|A4FUZ1	184	GLO1 "GLO1 protein" [Bos tauru	0.947	0.788	0.643	2.4e-51
UNIPROTKB|I3LDM7	184	GLO1 "Uncharacterized protein"	0.921	0.766	0.661	3.1e-51

TAIR|locus:2205110 AT1G08110 [Arabidopsis thaliana (taxid:3702)]

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 129/147 (87%), Positives = 138/147 (93%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             MFRIKDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT +AP DP +RTVWTFG+
Sbjct:    82 MFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQ 141

Query:    61 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
             PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE LGVEFAKKP+
Sbjct:   142 PATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPN 201

Query:   121 GGKLKGVAFIKDPDDYWIEIFDLKTIG 147
              GK+K +AFIKDPD YWIEIFDLKTIG
Sbjct:   202 DGKMKNIAFIKDPDGYWIEIFDLKTIG 228

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

UNIPROTKB|F1N9Q2 GLO1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 99/144 (68%), Positives = 118/144 (81%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M R+KDPK SLDFY+RVLGM+LL++ DFP MKFSLYFLGYED    P D  +RT WTF +
Sbjct:    42 MLRVKDPKKSLDFYTRVLGMTLLQKFDFPPMKFSLYFLGYEDKNDIPKDKAERTSWTFSR 101

Query:    61 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              AT+ELTHNWGTE+D + + YHNGNS+PRGFGHIGI V DV KAC+RFE LGV+F KKPD
Sbjct:   102 KATLELTHNWGTEND-EKQSYHNGNSDPRGFGHIGIAVPDVNKACKRFEELGVKFVKKPD 160

Query:   121 GGKLKGVAFIKDPDDYWIEIFDLK 144
              GK+KG+AF++DPD YWIEI + K
Sbjct:   161 DGKMKGLAFVQDPDGYWIEILNPK 184

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

MGI|MGI:95742 Glo1 "glyoxalase 1" [Mus musculus (taxid:10090)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 100/149 (67%), Positives = 118/149 (79%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF +
Sbjct:    36 MLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSR 95

Query:    61 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD
Sbjct:    96 KATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD 154

Query:   121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
              GK+KG+AFI+DPD YWIEI +   I  I
Sbjct:   155 DGKMKGLAFIQDPDGYWIEILNPNKIATI 183

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;IDA

GO:0005975 "carbohydrate metabolic process" evidence=ISO

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0006749 "glutathione metabolic process" evidence=ISO

GO:0009438 "methylglyoxal metabolic process" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

RGD|2702 Glo1 "glyoxalase 1" [Rattus norvegicus (taxid:10116)]

 Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 97/142 (68%), Positives = 116/142 (81%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  +RT W F +
Sbjct:    36 MLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFSR 95

Query:    61 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RFE LGV+F KKPD
Sbjct:    96 KATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVKKPD 154

Query:   121 GGKLKGVAFIKDPDDYWIEIFD 142
              GK+KG+AF++DPD YWIEI +
Sbjct:   155 DGKMKGLAFVQDPDGYWIEILN 176

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;ISS;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0006749 "glutathione metabolic process" evidence=IDA

GO:0009438 "methylglyoxal metabolic process" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;ISS

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q5BL69 glo1 "Glyoxalase 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
 Identities = 98/146 (67%), Positives = 115/146 (78%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SL+FY+ VLGM+LL++ DFP MKFSLYF+ YED    PAD  +RT WTF +
Sbjct:    37 MLRIKDPKKSLEFYTNVLGMTLLQKFDFPSMKFSLYFMAYEDKKDIPADVNERTAWTFSR 96

Query:    61 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              AT+ELTHNWGTE+D   K YHNGNS+PRGFGHIG+ V DVY AC+RFE LGV F KKPD
Sbjct:    97 KATLELTHNWGTENDE--KPYHNGNSDPRGFGHIGLAVPDVYAACKRFEELGVTFVKKPD 154

Query:   121 GGKLKGVAFIKDPDDYWIEIFDLKTI 146
              GK+KG+AFI+DPD YWIEI    T+
Sbjct:   155 DGKMKGLAFIQDPDGYWIEILSPNTM 180

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

FB|FBgn0033162 CG1707 [Drosophila melanogaster (taxid:7227)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 96/146 (65%), Positives = 115/146 (78%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M+RIKDP+ SL FY+ VLGM+LL +LDFPE KFSLYFLGYE+    P DP  R  W   +
Sbjct:    32 MYRIKDPRKSLPFYTGVLGMTLLVKLDFPEAKFSLYFLGYENATDVPKDPKQRRSWALSR 91

Query:    61 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              ATIELTHNWGTE DPD + YH GN++PRGFGHIGI V DVY AC+RF+ LGV+F KKPD
Sbjct:    92 KATIELTHNWGTERDPD-QNYHTGNTDPRGFGHIGIMVPDVYAACQRFQELGVDFVKKPD 150

Query:   121 GGKLKGVAFIKDPDDYWIEIFDLKTI 146
              G++KG+AFIKDPD YWIEIF+  ++
Sbjct:   151 DGRMKGLAFIKDPDGYWIEIFNAHSV 176

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q5EI50 Q5EI50 "GekBS101P" [Gekko japonicus (taxid:146911)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 98/142 (69%), Positives = 115/142 (80%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SLDFY+RVLGM+LL++ DFP MKFSLYFL YED    P D  ++T WTF +
Sbjct:     1 MLRIKDPKKSLDFYTRVLGMTLLQKCDFPSMKFSLYFLAYEDKNDIPKDAKEKTAWTFSR 60

Query:    61 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              AT+ELTHNWGTE+D D + YHNGNS+PRGFGHIGI V DV  AC+RFE LGV+F KKPD
Sbjct:    61 KATMELTHNWGTENDED-QTYHNGNSDPRGFGHIGIAVPDVNAACKRFEELGVKFVKKPD 119

Query:   121 GGKLKGVAFIKDPDDYWIEIFD 142
              GK+KG+AFI+DPD YWIEI +
Sbjct:   120 DGKMKGLAFIQDPDGYWIEILN 141

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

ZFIN|ZDB-GENE-030722-9 glo1 "glyoxalase 1" [Danio rerio (taxid:7955)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 95/140 (67%), Positives = 113/140 (80%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M R+KDP  SLDFY+R+LGM+LL++ DFP M+F+LYFLGYED    PAD  +RT WTF +
Sbjct:    31 MLRVKDPVKSLDFYTRILGMTLLQKFDFPSMRFTLYFLGYEDKKEIPADVKERTAWTFSR 90

Query:    61 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              ATIELTHNWG+E+D D + YHNGNS+PRGFGHIGI V DVY AC+ FE  GV F KKPD
Sbjct:    91 RATIELTHNWGSETD-DSQSYHNGNSDPRGFGHIGIAVPDVYAACKLFEENGVTFVKKPD 149

Query:   121 GGKLKGVAFIKDPDDYWIEI 140
              GK+KG+AFI+DPD YWIEI
Sbjct:   150 EGKMKGLAFIQDPDGYWIEI 169

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

UNIPROTKB|A4FUZ1 GLO1 "GLO1 protein" [Bos taurus (taxid:9913)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 94/146 (64%), Positives = 116/146 (79%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P D  ++  W F +
Sbjct:    36 MLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPKDKDEKVAWVFSR 95

Query:    61 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RFE LG++F KKPD
Sbjct:    96 KATLELTHNWGTEDD-ETQSYHSGNSDPRGFGHIGIAVPDVHGACKRFEELGIKFVKKPD 154

Query:   121 GGKLKGVAFIKDPDDYWIEIFDLKTI 146
              GK+KG+AFI+DPD YWIEI +  T+
Sbjct:   155 DGKMKGLAFIQDPDGYWIEILNPNTM 180

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|I3LDM7 GLO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 94/142 (66%), Positives = 114/142 (80%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P D  ++  W F +
Sbjct:    36 MLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPKDKSEKAAWAFSR 95

Query:    61 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RFE LGV+F KKPD
Sbjct:    96 KATLELTHNWGTEDD-ESQSYHSGNSDPRGFGHIGIAVPDVHGACKRFEELGVKFVKKPD 154

Query:   121 GGKLKGVAFIKDPDDYWIEIFD 142
              GK+KG+AFI+DPD YWIEI +
Sbjct:   155 DGKMKGLAFIQDPDGYWIEILN 176

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q4R5F2	LGUL_MACFA	4, ., 4, ., 1, ., 5	0.6174	0.9673	0.8043	N/A	no
O04885	LGUL_BRAJU	4, ., 4, ., 1, ., 5	0.8421	0.9934	0.8216	N/A	no
Q04760	LGUL_HUMAN	4, ., 4, ., 1, ., 5	0.6478	0.9215	0.7663	yes	no
P0AC83	LGUL_SHIFL	4, ., 4, ., 1, ., 5	0.3533	0.8039	0.9111	yes	no
Q9CPU0	LGUL_MOUSE	4, ., 4, ., 1, ., 5	0.6711	0.9673	0.8043	yes	no
O49818	LGUL_CICAR	4, ., 4, ., 1, ., 5	0.8523	0.9738	0.8010	N/A	no
Q9HU72	LGUL_PSEAE	4, ., 4, ., 1, ., 5	0.5733	0.9607	0.8352	yes	no
Q42891	LGUL_SOLLC	4, ., 4, ., 1, ., 5	0.8169	1.0	0.8270	N/A	no
Q9ZS21	LGUL_SOYBN	4, ., 4, ., 1, ., 5	0.8322	0.9738	0.8054	no	no
Q6P7Q4	LGUL_RAT	4, ., 4, ., 1, ., 5	0.6577	0.9673	0.8043	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	0.691
4th Layer	4.4.1.5	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	153
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	1e-111
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-106
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	2e-62
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	5e-61
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	1e-24
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	3e-20
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	9e-19
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	2e-13
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	2e-11
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	5e-11
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	1e-08
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	4e-06
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	2e-04
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	4e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	0.001
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	0.001
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	0.003

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score =  314 bits (805), Expect = e-111
 Identities = 132/152 (86%), Positives = 140/152 (92%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M+RIKDPK SLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDTASAP DP +RTVWTFG+
Sbjct: 80  MYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQ 139

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFE LGVEF KKP+
Sbjct: 140 KATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPN 199

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 152
            GK+KG+AFIKDPD YWIEIFDLKTIG    +
Sbjct: 200 DGKMKGIAFIKDPDGYWIEIFDLKTIGTTTVN 231

Length = 233

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score =  299 bits (766), Expect = e-106
 Identities = 130/149 (87%), Positives = 139/149 (93%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFRIKDPK SLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED+ +AP DP +RTVWTFG+
Sbjct: 32  MFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGR 91

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDDVYKACERFE+LGVEF KKPD
Sbjct: 92  KATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPD 151

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AFIKDPD YWIEIFDLK IG I
Sbjct: 152 DGKMKGLAFIKDPDGYWIEIFDLKRIGGI 180

Length = 185

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  188 bits (479), Expect = 2e-62
 Identities = 73/149 (48%), Positives = 84/149 (56%), Gaps = 27/149 (18%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+ D   SLDFY+ VLGM LL++ DFPEMKFSL FLGY D  SA              
Sbjct: 22  MLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSA-------------- 67

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-- 118
            A IELTHNWGTE       Y  GN    GFGHI I VDDVYKACER   LG    ++  
Sbjct: 68  -AVIELTHNWGTEK------YDLGN----GFGHIAIGVDDVYKACERVRALGGNVVREPG 116

Query: 119 PDGGKLKGVAFIKDPDDYWIEIFDLKTIG 147
           P  G    +AF++DPD Y IE+   K+  
Sbjct: 117 PVKGGTTVIAFVEDPDGYKIELIQRKSTK 145

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  183 bits (468), Expect = 5e-61
 Identities = 74/141 (52%), Positives = 87/141 (61%), Gaps = 24/141 (17%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KD + SLDFY+ VLGM LL+R DFPE KF+L FLGY D  S               
Sbjct: 5   MLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEG------------- 51

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              +ELT+NWGTE     + Y NGN    GFGH+   VDDVY ACER E +GVE  K P 
Sbjct: 52  --VLELTYNWGTE-----EPYDNGN----GFGHLAFAVDDVYAACERLEEMGVEVTKPPG 100

Query: 121 GGKLKGVAFIKDPDDYWIEIF 141
            G +KG+AFIKDPD YWIE+ 
Sbjct: 101 DGGMKGIAFIKDPDGYWIELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score = 91.6 bits (227), Expect = 1e-24
 Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 31/152 (20%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+ D + S+DFY+ VLGM LL+  + PE K+SL F+GY                   +
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------E 45

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            A IELT+NWG +       Y  G +    +GHI ++VD+  +ACE+  + G    +  +
Sbjct: 46  EAVIELTYNWGVDK------YELGTA----YGHIALSVDNAAEACEKIRQNGGNVTR--E 93

Query: 121 GGKLKG----VAFIKDPDDYWIEIFDLKTIGK 148
            G +KG    +AF++DPD Y IE+ + K  G+
Sbjct: 94  AGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR 125

Length = 129

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 80.2 bits (198), Expect = 3e-20
 Identities = 36/141 (25%), Positives = 52/141 (36%), Gaps = 27/141 (19%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             R+ D + SLDFY+ VLG  L++ +D  E      F                       
Sbjct: 6   ALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGR----------------- 48

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
              +EL  N          G H           I  +VDDV  A +R +  GVE  ++P 
Sbjct: 49  --VLELLLNETPPPAAAGFGGH-------HIAFIAFSVDDVDAAYDRLKAAGVEIVREPG 99

Query: 120 DGGKLKGVAFIKDPDDYWIEI 140
             G     ++ +DPD   IE+
Sbjct: 100 RHGWGGRYSYFRDPDGNLIEL 120

Length = 120

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 79.8 bits (197), Expect = 9e-19
 Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 33/145 (22%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDTASAPADPVDRTVWTF 58
           ++R+ D   ++ FY+  LGM LL++ D PE K++  FLGY  ED+               
Sbjct: 29  VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFV------------ 76

Query: 59  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 118
                +ELT+N+G +       Y  G     GFGH GI V+DV K  E  +  G +  ++
Sbjct: 77  -----VELTYNYGVDK------YDIGT----GFGHFGIAVEDVAKTVELVKAKGGKVTRE 121

Query: 119 P---DGGKLKGVAFIKDPDDYWIEI 140
           P    GGK   +AF+KDPD Y  E+
Sbjct: 122 PGPVKGGKSV-IAFVKDPDGYKFEL 145

Length = 286

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 65.6 bits (160), Expect = 2e-13
 Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 30/144 (20%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+ D   S+ FY +  GM LL++ D PE K+++  +GY      P D          K
Sbjct: 159 MLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGY-----GPED----------K 203

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              +ELT+N+G         Y  GN     +  I I  DDVYK  E  + +G +  ++P 
Sbjct: 204 TTVLELTYNYGV------TEYTKGN----AYAQIAIGTDDVYKTAEAIKLVGGKITREPG 253

Query: 121 ---GGKLKGVAFIKDPDDYWIEIF 141
              G   K  A + DPD  W  +F
Sbjct: 254 PLPGINTKITACL-DPDG-WKTVF 275

Length = 286

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 57.0 bits (138), Expect = 2e-11
 Identities = 36/140 (25%), Positives = 49/140 (35%), Gaps = 34/140 (24%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 61
             + D + ++ FY  VLG  +L+R           FL    T                  
Sbjct: 4   LTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLGGT------------------ 42

Query: 62  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG 121
             +EL           F+G         G  H+   VDDV  A ER +  GVE    P  
Sbjct: 43  -RLEL-----------FEGDEPAPPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPRE 90

Query: 122 GKLKG-VAFIKDPDDYWIEI 140
               G VA+ +DPD   IE+
Sbjct: 91  EPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 56.7 bits (136), Expect = 5e-11
 Identities = 27/140 (19%), Positives = 42/140 (30%), Gaps = 10/140 (7%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              + D + S+DFY+ VLG+ L+K           Y L + D    P + +      FG 
Sbjct: 7   TLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAF----FGF 62

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
                              G   G+                  A    +  GV       
Sbjct: 63  EGRAGTGFVGDV-----ALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP 117

Query: 121 GGKLKGVAFIKDPDDYWIEI 140
            G+     + +DPD   IE+
Sbjct: 118 -GRGGVHVYFRDPDGILIEL 136

Length = 138

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 49.4 bits (118), Expect = 1e-08
 Identities = 24/144 (16%), Positives = 42/144 (29%), Gaps = 39/144 (27%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 61
             + D + +  FY  +LG  +                                    G+ 
Sbjct: 1   LPVSDLEAARAFYEELLGFEV--------------------------------EEEDGEY 28

Query: 62  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 119
           A   L          +  G    ++   G  H+   VDD+     R +  G    + P  
Sbjct: 29  AEFRLGLVLALGGFIELIGLPEPDAPGGGGVHLYFEVDDLDALVARLKAAGGTILEPPED 88

Query: 120 --DGGKLKGVAFIKDPDDYWIEIF 141
              GG+     +++DPD   IE+ 
Sbjct: 89  TPWGGR---EFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 35/142 (24%), Positives = 46/142 (32%), Gaps = 36/142 (25%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW-TFGK 60
            R+ D + S  FY+ VLG+    R  F        F G                W   G 
Sbjct: 6   LRVPDLEASRAFYTDVLGLEEGPRPPFL-------FPGA---------------WLYAGD 43

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              + L      E  PD      G        HI   VDD+     R +  GV +     
Sbjct: 44  GPQLHL----IEEDPPDALPEGPGR-----DDHIAFRVDDLDAFRARLKAAGVPY--TES 92

Query: 121 GGKLKGVA--FIKDPDDYWIEI 140
                GV   F++DPD   IE+
Sbjct: 93  DVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 32/139 (23%), Positives = 51/139 (36%), Gaps = 30/139 (21%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPAD-PVDRTVWTFGK 60
           F++ +   ++ FY  VLGM +L+  +F E        G +   + P D    +T+  +G 
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEE--------GCKAACNGPYDGKWSKTMIGYGP 59

Query: 61  PAT---IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 117
                 +ELT+N+G         Y  GN     F  I I         ++          
Sbjct: 60  EDDHFVVELTYNYGIGD------YELGND----FLGITIHSKQAVSNAKKHNW------- 102

Query: 118 KPDGGKLKGVAFIKDPDDY 136
            P      GV  +K P  Y
Sbjct: 103 -PVTEVEDGVYEVKAPGGY 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 37.6 bits (88), Expect = 4e-04
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 26/139 (18%)

Query: 5   KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 64
           +D + ++DFY+ VLG+ L+K+    +     Y L + D   +P   +  T + +      
Sbjct: 10  RDAQETVDFYTDVLGLRLVKKTVNQD-DPGTYHLFFGDGLGSPGTLL--TFFEWP----- 61

Query: 65  ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG 121
                     D   KG       P    HI  +V     +    ER    GV  +   D 
Sbjct: 62  ----------DAGPKGRR----GPGQIHHIAFSVPSEASLEAWRERLRAAGVPVSGVVDR 107

Query: 122 GKLKGVAFIKDPDDYWIEI 140
              + + F +DPD   +E+
Sbjct: 108 FGERSLYF-EDPDGIRLEL 125

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 36.7 bits (86), Expect = 0.001
 Identities = 37/136 (27%), Positives = 49/136 (36%), Gaps = 31/136 (22%)

Query: 5   KDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT 63
            D + +L FY  VLG+   +R + P E    L FLG  +                     
Sbjct: 9   PDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNV-------------------Q 49

Query: 64  IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA----KKP 119
           IEL      + D     +     E  G  HI   VDD+  A  R +  GV       +  
Sbjct: 50  IELIE--PLDDDSPIAKFLEKRGE--GLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIG 105

Query: 120 DGGKLKGVAFIKDPDD 135
            GGK   VAF+  P D
Sbjct: 106 AGGKR--VAFL-HPKD 118

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 36.1 bits (84), Expect = 0.001
 Identities = 28/96 (29%), Positives = 31/96 (32%), Gaps = 12/96 (12%)

Query: 38  LGYEDTASAPADPVDRTVWTFG--KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIG 95
           LG           VD      G      +EL      ES  D  G         G  HI 
Sbjct: 23  LGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGESFLDKGGP--------GLHHIA 74

Query: 96  ITVDDVYKACERFERLGVEFAKKP--DGGKLKGVAF 129
             VDD+  A  R E  GV  A K    G   + VAF
Sbjct: 75  YWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 35.4 bits (82), Expect = 0.003
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)

Query: 83  NGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD----GGKLKGVAFIKDPDD 135
              +   G  H+G+ VD   +V +A  R E  G+   K+ D          V ++ DPD 
Sbjct: 51  RPGAPGGGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKV-WVTDPDG 109

Query: 136 YWIEIF 141
              E+F
Sbjct: 110 NAWEVF 115

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	153
PLN02367	233	lactoylglutathione lyase	99.96
PLN03042	185	Lactoylglutathione lyase; Provisional	99.93
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.93
PRK10291	129	glyoxalase I; Provisional	99.89
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.86
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.85
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.85
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.83
PRK11478	129	putative lyase; Provisional	99.83
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.82
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.82
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.81
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.81
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.81
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.8
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.79
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.79
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.78
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.78
PLN02300	286	lactoylglutathione lyase	99.78
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.77
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.77
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.77
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.76
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.76
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.76
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.75
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.75
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.74
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.74
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.74
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.73
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.73
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.73
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.73
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.73
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.73
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.73
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.72
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.72
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.72
PLN02300	286	lactoylglutathione lyase	99.71
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.71
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.71
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.71
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.71
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.7
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.7
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.7
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.7
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.69
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.69
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.69
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.69
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.68
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.67
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.67
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.67
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.67
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.67
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.67
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.67
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.67
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.67
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.66
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.66
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.65
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.65
PRK06724	128	hypothetical protein; Provisional	99.65
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.62
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.62
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.61
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.6
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.58
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.58
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.52
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.52
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.49
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.49
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.39
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.36
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.35
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.34
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.33
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.25
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.24
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.24
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.06
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.98
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.98
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.82
PRK10148	147	hypothetical protein; Provisional	98.71
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.7
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.51
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.33
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.25
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.12
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	97.6
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.38
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.21
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.2
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	96.82
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	96.74
PF15067	236	FAM124: FAM124 family	96.58
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	95.77
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	95.12
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	94.59
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	93.95
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	93.63
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	93.18
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	92.57
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	91.78
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	91.58
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	91.26
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	90.75
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	90.72
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	90.59
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	90.24
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	89.9
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	88.94
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	88.9
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	88.58
PRK11478	129	putative lyase; Provisional	88.15
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	87.66
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	87.06
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	86.61
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	86.43
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	86.37
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	86.25
cd04895	72	ACT_ACR_1 ACT domain-containing protein which is c	85.78
PLN03042	185	Lactoylglutathione lyase; Provisional	85.54
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	85.2
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	84.81
cd04882	65	ACT_Bt0572_2 C-terminal ACT domain of a novel prot	83.29
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	82.93
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	82.33
PLN02367	233	lactoylglutathione lyase	80.82
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	80.57
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	80.24

>PLN02367 lactoylglutathione lyase

Probab=99.96  E-value=4.4e-28  Score=172.91  Aligned_cols=148  Identities=89%  Similarity=1.519  Sum_probs=119.3

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      ||.|+|++++++||+++|||++..+...++.++.++|+++++....|....+..+|..++...|||.++++.+..+....
T Consensus        80 mlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~~~~~~~  159 (233)
T PLN02367         80 MYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESDPDFKG  159 (233)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCccccchh
Confidence            68999999999999999999999988888888999999875432222222345677777678999998777654333334


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCcccc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK  148 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  148 (153)
                      +..++..+.|+.||||.|+|+++++++|+++|+++...|..+...+.+||+|||||+|||+|......
T Consensus       160 y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~~~~~  227 (233)
T PLN02367        160 YHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLKTIGT  227 (233)
T ss_pred             cccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecccccc
Confidence            77777666799999999999999999999999999988877665567899999999999999876553

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.93  E-value=1.4e-24  Score=151.63  Aligned_cols=148  Identities=87%  Similarity=1.508  Sum_probs=108.7

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|+++|++||+++|||++..+...++.++.++|++.+.....|+++.....|...+...|||....+....+....
T Consensus        32 ~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~~p~~~~  111 (185)
T PLN03042         32 MFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDPEFKG  111 (185)
T ss_pred             EEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcccccccc
Confidence            58999999999999999999999887777777888888764322122222234555555677899987554332222222


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCcccc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK  148 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  148 (153)
                      +..++..+.|+.||||.|+|+++++++|+++|+.+...|..+...+.+||+|||||.|||++......
T Consensus       112 ~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~~~~~  179 (185)
T PLN03042        112 YHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLKRIGG  179 (185)
T ss_pred             cccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECCCchh
Confidence            44444334589999999999999999999999999977765443456788999999999999776543

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.93  E-value=2.1e-25  Score=147.50  Aligned_cols=143  Identities=56%  Similarity=0.935  Sum_probs=122.0

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |++++|+.+++.||.+++|+.+......++..+..++++.+.....|........|.......+|+.+++++.+++ .+.
T Consensus        27 ~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gtes~~-~~~  105 (170)
T KOG2944|consen   27 MLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTESPP-DQA  105 (170)
T ss_pred             eeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCCCCc-chh
Confidence            6889999999999999999999988777777788888888654444444444558888889999999999987655 334


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      +.+++..|+|++||||+|+|+++++++|+++|+++...+.+|....++|+.||||++|||....
T Consensus       106 ~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen  106 YLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             hcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeecC
Confidence            8889888899999999999999999999999999999998888767899999999999998653

>PRK10291 glyoxalase I; Provisional

Probab=99.89  E-value=1.3e-21  Score=129.48  Aligned_cols=121  Identities=41%  Similarity=0.755  Sum_probs=87.3

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|+++|++||+++|||++......++..+.+++++.++..               ....+++...++..      +
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~------~   59 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVD------K   59 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCC---------------CcceEEeeecCCCC------C
Confidence            68999999999999999999998776555555666777543210               02456665332211      1


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc--ceEEEEECCCCCEEEEeccCcc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKTI  146 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~  146 (153)
                      +..+    .++.|+||.|+|+++++++|+++|+++..++.....  ...+||+|||||+|||++..+.
T Consensus        60 ~~~g----~~~~hlaf~V~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~  123 (129)
T PRK10291         60 YELG----TAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  123 (129)
T ss_pred             CcCC----CCeeEEEEEeCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcccc
Confidence            2112    368899999999999999999999998865533222  2467889999999999997753

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.86  E-value=4.2e-20  Score=120.32  Aligned_cols=117  Identities=61%  Similarity=1.112  Sum_probs=85.7

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||+.......++.++..+++..++.               .+...+++....+...     +
T Consensus         5 ~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~l~~~~~~~~-----~   64 (121)
T cd07233           5 MLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDE---------------DSEGVLELTYNWGTEE-----P   64 (121)
T ss_pred             EEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCC---------------CCccEEEEEecCCCCC-----C
Confidence            3789999999999999999999887654444455566664320               0135677654322211     1


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEe
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  141 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  141 (153)
                      ...    ..+..|++|.++|+++++++++++|+++..+|.....++.+||+|||||+|||+
T Consensus        65 ~~~----~~~~~~i~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          65 YDN----GNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             cCC----CCCeEEEEEEeCCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            111    126789999999999999999999999998886554456789999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=6.5e-20  Score=123.04  Aligned_cols=122  Identities=17%  Similarity=0.299  Sum_probs=83.5

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCC-----------ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   69 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   69 (153)
                      .|.|+|+++|++||++ |||++..+...++           ....++++...                 .+...|||...
T Consensus         8 ~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----------------~g~~~iel~~~   69 (142)
T cd08353           8 GIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTP-----------------DGHSRLELSKF   69 (142)
T ss_pred             EEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCC-----------------CCCceEEEEEe
Confidence            3789999999999998 9999876543221           11222333221                 23578899865


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcc-cceEEEEECCCCCEEEEecc
Q 031774           70 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~  143 (153)
                      ..+...+... ..  .....|+.||||.|+|+++++++|+++|+++..++.... ..+.+||+||||+.|||+|.
T Consensus        70 ~~~~~~~~~~-~~--~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          70 HHPAVIADHR-PA--PVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             cCCCCcCcCC-CC--CCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence            4332211100 10  112347899999999999999999999999987664332 23578999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.85  E-value=1.3e-19  Score=122.93  Aligned_cols=124  Identities=56%  Similarity=0.942  Sum_probs=87.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||++..+...++..+..++++.++..               ....+++........      
T Consensus        22 ~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~~~~~~~------   80 (150)
T TIGR00068        22 MLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDET---------------SAAVIELTHNWGTEK------   80 (150)
T ss_pred             EEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCC---------------CccEEEEeecCCCCc------
Confidence            37899999999999999999998765544444445556543210               023455543222111      


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCC--CcccceEEEEECCCCCEEEEeccCccccc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKTIGKI  149 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~--~~~~~~~~~~~DPdG~~iel~~~~~~~~~  149 (153)
                      ..    ...+..|++|.|+|+++++++|.++|+++..+|.  .+...+.+||+|||||+|||++..+.+++
T Consensus        81 ~~----~~~g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  147 (150)
T TIGR00068        81 YD----LGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDG  147 (150)
T ss_pred             cc----CCCceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhh
Confidence            11    1137789999999999999999999999987663  22223578899999999999998876654

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.83  E-value=3.1e-19  Score=122.71  Aligned_cols=122  Identities=20%  Similarity=0.221  Sum_probs=80.9

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeec--C----------------CccEEEEEeeccCCCCCCCCcccceeeecCCCc
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDF--P----------------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA   62 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   62 (153)
                      .|.|+|+++|++||+++|||++..+...  .                ...+.++++..+                  ++.
T Consensus         9 ~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~------------------~~~   70 (162)
T TIGR03645         9 GISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTG------------------DRI   70 (162)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecC------------------CCC
Confidence            3789999999999999999988643110  0                011333333321                  245


Q ss_pred             EEEEEeccCCCCCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC-C---Ccc-cceEEEEECCCCCE
Q 031774           63 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-D---GGK-LKGVAFIKDPDDYW  137 (153)
Q Consensus        63 ~lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~-~---~~~-~~~~~~~~DPdG~~  137 (153)
                      .|+++....+.....  ..   .....|+.|+||.|+|+++++++|+++|+++...+ .   .+. ..+.+|++|||||+
T Consensus        71 ~ieL~~~~~~~~~~~--~~---~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~  145 (162)
T TIGR03645        71 GVELFEFKNQENPED--NF---EYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNI  145 (162)
T ss_pred             cEEEEeccCCCCCCc--cc---ccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCE
Confidence            688886543322110  01   11124889999999999999999999998765422 2   111 12578999999999


Q ss_pred             EEEeccCc
Q 031774          138 IEIFDLKT  145 (153)
Q Consensus       138 iel~~~~~  145 (153)
                      |||+++..
T Consensus       146 iEl~~~~~  153 (162)
T TIGR03645       146 LEIYSHSY  153 (162)
T ss_pred             EEEEEcCh
Confidence            99999764

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PRK11478 putative lyase; Provisional

Probab=99.83  E-value=4.6e-19  Score=116.87  Aligned_cols=116  Identities=24%  Similarity=0.306  Sum_probs=77.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCc-cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|++++++||+++|||++......++. .+. ..+..+                  +...+++.....+...+.   
T Consensus        12 l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~l~l~~~~~~~~~~~---   69 (129)
T PRK11478         12 IIATDYAVSKAFYCDILGFTLQSEVYREARDSWK-GDLALN------------------GQYVIELFSFPFPPERPS---   69 (129)
T ss_pred             EEcCCHHHHHHHHHHHhCCEecccccccccccce-eeEecC------------------CCcEEEEEEecCCCCCCC---
Confidence            789999999999999999998754222211 111 111111                  246777765332221110   


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCc-ccceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~  143 (153)
                          .....|+.|+||.++|+++++++|+++|+++...+... ...+.+||+|||||.|||++.
T Consensus        70 ----~~~~~g~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         70 ----RPEACGLRHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             ----CCCCCceeEEEEEeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEeC
Confidence                11124778999999999999999999999987543222 223578999999999999873

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=4.3e-19  Score=115.96  Aligned_cols=116  Identities=26%  Similarity=0.368  Sum_probs=79.4

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||+.......+..++..+|+..++                  +..++++........+    
T Consensus         6 ~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~~~~~~~~----   63 (125)
T cd07241           6 AIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD------------------GARLELMTRPDIAPSP----   63 (125)
T ss_pred             EEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC------------------CcEEEEEcCcccCCCc----
Confidence            378999999999999999999865443333334444554421                  3567776432111100    


Q ss_pred             CCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEe
Q 031774           81 YHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  141 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  141 (153)
                      .   .....|+.|+||.|+   |+++++++|+++|+++...|.....+ +.++++|||||.|||.
T Consensus        64 ~---~~~~~g~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          64 N---EGERTGWAHLAFSVGSKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             c---cCCCCceEEEEEECCCHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence            0   112347899999996   48999999999999998866433222 3567899999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.82  E-value=4e-19  Score=118.71  Aligned_cols=119  Identities=20%  Similarity=0.226  Sum_probs=82.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++..+...++  ....++..                   +...+++........ + ...+
T Consensus         6 i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~-------------------g~~~l~l~~~~~~~~-~-~~~~   62 (136)
T cd08342           6 FYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQ-------------------GDINFVLNSPLNSFA-P-VADF   62 (136)
T ss_pred             EEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEc-------------------CCEEEEEecCCCCCC-c-hHHH
Confidence            78999999999999999999987654321  12233321                   135566643211111 0 0001


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~~  145 (153)
                      .  .....+..|++|.|+|+++++++|+++|+++..+|...++ .+.+|++||||++|||+++..
T Consensus        63 ~--~~~~~g~~hia~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~  125 (136)
T cd08342          63 L--EKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKG  125 (136)
T ss_pred             H--HhcCCceEEEEEEeCCHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecCC
Confidence            0  0112478899999999999999999999999988876333 358899999999999999654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.8e-18  Score=113.98  Aligned_cols=109  Identities=30%  Similarity=0.551  Sum_probs=77.7

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCC-----------ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   69 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   69 (153)
                      +|.|+|+++|++||+++|||++..+...++           ..+..++++....               ..+..|||.+.
T Consensus         7 ~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~---------------~~~~~lEL~~n   71 (127)
T cd08358           7 VFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE---------------DDHFVVELTYN   71 (127)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCC---------------CCccEEEeEec
Confidence            589999999999999999999987765554           3344455553210               11568999875


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEec
Q 031774           70 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  142 (153)
                      ++..+      +..+.    +  |++|.+++. ++.++|+++|+++...+.     .++|++||||+.|||+.
T Consensus        72 ~~~~~------~~~g~----~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~-----~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          72 YGIGD------YELGN----D--FLGITIHSK-QAVSNAKKHNWPVTEVED-----GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCCC------CCCCC----C--EEEEEEECH-HHHHHHHHCCCceecCCC-----CEEEEECCCCCEEEEec
Confidence            54321      32222    3  677777776 566999999998887664     26899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=2.2e-18  Score=112.42  Aligned_cols=116  Identities=24%  Similarity=0.354  Sum_probs=79.4

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCC-ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      .|.|.|++++++||+++|||+.......++ ..+.+ .+..+                  +...+++.........+   
T Consensus         8 ~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~------------------~~~~i~l~~~~~~~~~~---   65 (125)
T cd08352           8 AIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLN------------------GGYQLELFSFPNPPERP---   65 (125)
T ss_pred             EEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecC------------------CCcEEEEEEcCCCCCCC---
Confidence            378999999999999999999886543222 12222 22211                  13567775432221100   


Q ss_pred             CCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEec
Q 031774           80 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~  142 (153)
                       .   .....|..|++|.|+|+++++++|+++|+++...+..... .+.+|++||+||+|||+|
T Consensus        66 -~---~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          66 -S---YPEACGLRHLAFSVEDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             -C---CCcCCCceEEEEEeCCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence             0   1122478899999999999999999999998876643332 357899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=4.5e-18  Score=111.22  Aligned_cols=116  Identities=15%  Similarity=0.158  Sum_probs=79.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......++.......+..+                   +..+.+..........    .
T Consensus         5 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~l~~~~~~~~~~----~   61 (122)
T cd08355           5 LRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG-------------------DGGVMVGSVRDDYRAS----S   61 (122)
T ss_pred             EEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC-------------------CEEEEEecCCCccccc----c
Confidence            7899999999999999999998765433333323333332                   2344443222111000    0


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEec
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  142 (153)
                        ......+..|++|.|+|+++++++++++|+++..+|....++ +.++++|||||+|+|.+
T Consensus        62 --~~~~~~~~~~~~~~v~d~d~~~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          62 --ARAGGAGTQGVYVVVDDVDAHYERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             --cccCCCceEEEEEEECCHHHHHHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEec
Confidence              001113557999999999999999999999999888655444 57889999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=6.5e-18  Score=109.17  Aligned_cols=117  Identities=20%  Similarity=0.328  Sum_probs=81.4

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++.......+ ++..+.+...+.                ....+++.....+..  .   
T Consensus         3 ~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~----------------~~~~l~~~~~~~~~~--~---   60 (119)
T cd07263           3 SLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS----------------PETSLVLAPPANPAA--M---   60 (119)
T ss_pred             eEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC----------------CeeEEEEeCCCCccc--c---
Confidence            478999999999999999999987654212 233344442210                023455542221111  0   


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEec
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  142 (153)
                      .   .....+..|++|.++|+++++++|+++|+++..++.....++.+|++||+||+|||+|
T Consensus        61 ~---~~~~~~~~~~~~~v~di~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          61 S---GLQPGGTPGLVLATDDIDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             c---cccCCCceEEEEEehHHHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            0   1123467899999999999999999999999988744444568899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=7.3e-18  Score=108.63  Aligned_cols=106  Identities=20%  Similarity=0.324  Sum_probs=75.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||+.....   .  . ..++...+.                .+..+.+...  ...      
T Consensus         5 ~l~v~Dl~~s~~FY~~~lG~~~~~~~---~--~-~~~~~~~~~----------------~~~~~~~~~~--~~~------   54 (112)
T cd07238           5 NLPVADPEAAAAFYADVLGLDVVMDH---G--W-IATFASPQN----------------MTVQVSLATE--GGT------   54 (112)
T ss_pred             eEecCCHHHHHHHHHHhcCceEEEcC---C--c-eEEEeecCC----------------CCcEEEEecC--CCC------
Confidence            47899999999999999999986431   1  1 222322110                0244554321  100      


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  143 (153)
                             +....|++|.|+|+++++++|+++|+++..+|....++ +.+|+.||+||+|||.++
T Consensus        55 -------~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          55 -------ATVVPDLSIEVDDVDAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             -------CCCCCEEEEEeCCHHHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence                   01346999999999999999999999998877654444 578999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=1.7e-17  Score=107.98  Aligned_cols=114  Identities=18%  Similarity=0.126  Sum_probs=80.1

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||+.......++..+....+..+                   +..+.+... .+.. . .   
T Consensus         7 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~l~~~-~~~~-~-~---   61 (122)
T cd07246           7 LIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG-------------------DSVLMLADE-FPEH-G-S---   61 (122)
T ss_pred             EEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC-------------------CEEEEEecC-Cccc-C-C---
Confidence            7899999999999999999998876533333333333322                   234555421 1110 0 0   


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEec
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  142 (153)
                        ......+..|++|.|+|++++++++.+.|+++..+|....++ +.++++|||||+|+|.+
T Consensus        62 --~~~~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          62 --PASWGGTPVSLHLYVEDVDATFARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             --CCCCCCceEEEEEEeCCHHHHHHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence              001123567999999999999999999999999887544443 58899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.78  E-value=3.1e-18  Score=112.53  Aligned_cols=119  Identities=28%  Similarity=0.432  Sum_probs=80.9

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||+.......++..+..+++..+                   ...++|........ + ...
T Consensus         6 ~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~i~l~~~~~~~~-~-~~~   64 (128)
T TIGR03081         6 GIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG-------------------NTKVELLEPLGEDS-P-IAK   64 (128)
T ss_pred             EEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC-------------------CEEEEEEecCCCCC-h-HHH
Confidence            37899999999999999999987654333333444455432                   35677754322111 0 000


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeec-CCCcccc-eEEEE--ECCCCCEEEEec
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLK-GVAFI--KDPDDYWIEIFD  142 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~-~~~~~~~-~~~~~--~DPdG~~iel~~  142 (153)
                      +....  ..+..|+||.|+|+++++++|+++|+++..+ |..+.++ +.+|+  +||||++||++|
T Consensus        65 ~~~~~--~~g~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        65 FLEKN--GGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             HHhcC--CCceEEEEEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            11111  2477899999999999999999999999864 5555444 45566  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=1.3e-17  Score=108.35  Aligned_cols=113  Identities=19%  Similarity=0.211  Sum_probs=75.9

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||+......    .+  ..+..++                 +...|.+........ +.   
T Consensus         6 ~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~-----------------~~~~l~l~~~~~~~~-~~---   58 (119)
T cd08359           6 VIVTDDLAETADFYVRHFGFTVVFDSD----WY--VSLRSPD-----------------GGVELAFMLPGHETV-PA---   58 (119)
T ss_pred             EEEECCHHHHHHHHHHhhCcEEEeccC----cE--EEEecCC-----------------CceEEEEccCCCCCC-cc---
Confidence            378999999999999999999886521    12  2333221                 013444432111110 00   


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEec
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  142 (153)
                      .. .... ....|++|.|+|+++++++++++|+++..+|...+++ +.++++|||||+|||+|
T Consensus        59 ~~-~~~~-~~~~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          59 AQ-YQFQ-GQGLILNFEVDDVDAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             hh-cccC-CceEEEEEEECCHHHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            00 0111 2335999999999999999999999998877655444 67899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PLN02300 lactoylglutathione lyase

Probab=99.78  E-value=1.5e-17  Score=123.94  Aligned_cols=120  Identities=38%  Similarity=0.672  Sum_probs=86.1

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++..+...++..+..+++..+...               .+..+++....+...      
T Consensus        29 ~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~lel~~~~~~~~------   87 (286)
T PLN02300         29 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPED---------------SNFVVELTYNYGVDK------   87 (286)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCC---------------CceEEEEeccCCCCc------
Confidence            37899999999999999999998765544444556666542210               134566643222111      


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc--ceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~  145 (153)
                      ..    ...|+.|++|.|+|+++++++++++|+++...|.....  .+.+||+|||||+|||+++..
T Consensus        88 ~~----~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  150 (286)
T PLN02300         88 YD----IGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGP  150 (286)
T ss_pred             cc----cCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Confidence            11    12378899999999999999999999999877644322  246789999999999999754

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=2.3e-17  Score=107.96  Aligned_cols=118  Identities=20%  Similarity=0.287  Sum_probs=74.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC--CCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE--SDPDF   78 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~--~~~~~   78 (153)
                      +|.|+|++++++||+++|||+......  ...+..  +..+                   ...+.+.......  .....
T Consensus         5 ~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~--~~~~-------------------~~~~~~~~~~~~~~~~~~~~   61 (125)
T cd07264           5 IIYVEDVEKTLEFYERAFGFERRFLHE--SGDYGE--LETG-------------------ETTLAFASHDLAESNLKGGF   61 (125)
T ss_pred             EEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEEE--ecCC-------------------cEEEEEEcccccccccccCc
Confidence            478999999999999999999865422  112211  1111                   1222222111000  00000


Q ss_pred             CCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEecc
Q 031774           79 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        79 ~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  143 (153)
                      .+.  ......+..|++|.|+|+++++++++++|+++..+|...+++ +.++++|||||.|||.++
T Consensus        62 ~~~--~~~~~~~~~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          62 VKA--DPAQPPAGFEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             cCC--ccccCCCcEEEEEEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            000  001112346999999999999999999999998877554443 568899999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=9.2e-18  Score=109.55  Aligned_cols=111  Identities=20%  Similarity=0.260  Sum_probs=72.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|+++|++||+++|||++.....  .  + ..+..                     ...+.+...+.......  +
T Consensus         7 ~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~-~~~~~---------------------~~~l~~~~~~~~~~~~~--~   58 (120)
T cd09011           7 LLVVKDIEKSKKFYEKVLGLKVVMDFG--E--N-VTFEG---------------------GFALQEGYSWLEGISKA--D   58 (120)
T ss_pred             EEEECCHHHHHHHHHHhcCCEEeeccC--c--e-EEEec---------------------cceeccchhhhccCCcc--c
Confidence            478999999999999999999875321  1  1 11110                     11111110000000000  0


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCC-eEeecCCCcccc-eEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGV-EFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~-~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  143 (153)
                      .    ..+.+..|++|.|+|+++++++|+++|+ ++..+|...+++ +.+||+|||||+|||.+.
T Consensus        59 ~----~~~~~~~~l~~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          59 I----IEKSNNFELYFEEEDFDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             c----cccCCceEEEEEehhhHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            1    0112457999999999999999999986 677777655444 689999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.77  E-value=2.3e-17  Score=106.50  Aligned_cols=109  Identities=19%  Similarity=0.185  Sum_probs=76.6

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++..... +...+  +++..++                  ...+.+.......       
T Consensus         5 ~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~--~~~~~~~------------------~~~~~~~~~~~~~-------   56 (114)
T cd07247           5 ELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDY--AVFSTGG------------------GAVGGLMKAPEPA-------   56 (114)
T ss_pred             EeeCCCHHHHHHHHHhccCceeeeccC-CCCce--EEEEeCC------------------ccEEEEecCCCCC-------
Confidence            378999999999999999999976542 12222  2333221                  1233443221110       


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcc-cceEEEEECCCCCEEEEec
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~  142 (153)
                           ....+..|++|.++|+++++++|+++|+++..+|...+ .++.++++|||||.|+|+|
T Consensus        57 -----~~~~~~~~~~f~v~di~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          57 -----AGSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             -----CCCCCeEEEEEEeCCHHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence                 01125579999999999999999999999998775444 3468999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.76  E-value=5.5e-17  Score=109.33  Aligned_cols=109  Identities=19%  Similarity=0.230  Sum_probs=73.8

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCcc-EEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK-FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      +|.|+|++++++||+++|||++..+...++.. ...+|+..+..                 .+.+.+..  .+       
T Consensus        11 ~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-----------------~h~~~~~~--~~-------   64 (143)
T cd07243          11 LLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-----------------PHDIAFVG--GP-------   64 (143)
T ss_pred             EEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-----------------cceEEEec--CC-------
Confidence            37899999999999999999987664322222 12334433210                 12232311  00       


Q ss_pred             CCCCCCCCCCCcceEEEEeCCHHH---HHHHHHhcCCeEeecCC-Ccc-cceEEEEECCCCCEEEEecc
Q 031774           80 GYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPD-GGK-LKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~-~~~-~~~~~~~~DPdG~~iel~~~  143 (153)
                              ..++.|+||.|+|+++   +.++|+++|+++...|. .+. .+..+||+|||||.|||...
T Consensus        65 --------~~~~~Hiaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          65 --------DGKLHHFSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             --------CCCceEEEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence                    1367899999999877   67899999999876553 222 23578999999999999764

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.76  E-value=5.7e-17  Score=104.00  Aligned_cols=108  Identities=23%  Similarity=0.309  Sum_probs=76.1

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++.....  ...+  .++..+                   +..+.+........      
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~~~--~~~~~~-------------------~~~~~l~~~~~~~~------   53 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EPGY--AFLSRG-------------------GAQLMLSEHDGDEP------   53 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CCcE--EEEEeC-------------------CEEEEEeccCCCCC------
Confidence            378999999999999999999887643  1222  333321                   35566643221110      


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCe-EeecCCCcccc-eEEEEECCCCCEEEEec
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVE-FAKKPDGGKLK-GVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~-~~~~~~~~~~~-~~~~~~DPdG~~iel~~  142 (153)
                      .     ...+..|++|.++|+++++++++++|+. +..++.....+ +.++++||+||.|||.|
T Consensus        54 ~-----~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          54 V-----PLGRGGSVYIEVEDVDALYAELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             C-----CCCCcEEEEEEeCCHHHHHHHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            0     1125569999999999999999999998 55555443333 57889999999999976

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.76  E-value=1.2e-17  Score=106.72  Aligned_cols=107  Identities=25%  Similarity=0.396  Sum_probs=72.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  .  +.....+...                 ......+.......        
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~--~--~~~~~~~~~~-----------------~~~~~~~~~~~~~~--------   51 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP--D--YVDFSLGFRF-----------------HDGVIEFLQFPDPP--------   51 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET--S--EEEEEETEEE-----------------EEEEEEEEEEESSS--------
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC--C--eEEEEeccch-----------------hhhhHHHccCCccc--------
Confidence            78999999999999999999998432  2  2222221100                 01122332221111        


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEe
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  141 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  141 (153)
                          ..+.+..|++|.|+|+++++++++++|+++..+|....++ +.+++.|||||+|||+
T Consensus        52 ----~~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   52 ----GPPGGGFHLCFEVEDVDALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             ----SSSSSEEEEEEEESHHHHHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             ----cCCCceeEEEEEEcCHHHHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence                1123678999999999999999999999998877554444 6899999999999986

...

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=3.6e-17  Score=105.65  Aligned_cols=108  Identities=22%  Similarity=0.355  Sum_probs=75.6

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|+++|++||+++||+++.....    .+..  +...+                  +..+.++.......      
T Consensus         3 ~l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~--~~~~~------------------~~~~~l~~~~~~~~------   52 (114)
T cd07261           3 LLYVEDPAASAEFYSELLGREPVELSP----TFAL--FVLGS------------------GVKLGLWSRHTVEP------   52 (114)
T ss_pred             EEEECCHHHHHHHHHHHcCCCccCCCC----ceEE--EEeCC------------------CcEEEEeeccccCC------
Confidence            478999999999999999999876421    2222  22111                  24555643221110      


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEe
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  141 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  141 (153)
                      ..   ....+..|++|.+++   +++++++++++|+++..+|....+++.++|+|||||+|||.
T Consensus        53 ~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~  113 (114)
T cd07261          53 AS---DATGGGSELAFMVDDGAAVDALYAEWQAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVF  113 (114)
T ss_pred             CC---CCCCCceEEEEEcCCHHHHHHHHHHHHHCCCeEecCccccCCccEEEEECCCCCEEEee
Confidence            00   011356799999985   89999999999999998876555556789999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=2.6e-17  Score=105.28  Aligned_cols=110  Identities=26%  Similarity=0.330  Sum_probs=76.6

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||+.......+.   ...++..++                  ...+++.........     
T Consensus         5 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~------------------~~~i~l~~~~~~~~~-----   58 (114)
T cd07245           5 ALRVPDLEASRAFYTDVLGLEEGPRPPFLF---PGAWLYAGD------------------GPQLHLIEEDPPDAL-----   58 (114)
T ss_pred             EEecCCHHHHHHHHHHccCCcccCcCCCCC---CceEEEeCC------------------CcEEEEEecCCCccc-----
Confidence            378999999999999999999876543221   112333211                  236666543222110     


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEE
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  140 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel  140 (153)
                          .....+..|++|+++|+++++++++++|+++...+......+.+|+.||+||.|||
T Consensus        59 ----~~~~~~~~~~~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          59 ----PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             ----cCCCcccceEEEEeCCHHHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence                01123678999999999999999999999998877543334568999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.74  E-value=2.9e-17  Score=111.90  Aligned_cols=115  Identities=16%  Similarity=0.205  Sum_probs=76.6

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecC-CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      .|.|+|+++|++||+++|||++......+ .......|+..++.                 ...++.... ..       
T Consensus         6 ~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~-~l-------   60 (153)
T cd07257           6 VLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRG-----------------EEYVDHHTL-AL-------   60 (153)
T ss_pred             EEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCC-----------------CCcccchHH-HH-------
Confidence            37899999999999999999987654433 12234555554321                 000111000 00       


Q ss_pred             CCCCCCCCCCCcceEEEEeCCHHHHH---HHHHhcCCeEeecCCCccc--ceEEEEECCCCCEEEEeccC
Q 031774           80 GYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~di~~~~---~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~  144 (153)
                       . .  ....++.|+||.|+|++++.   ++|+++|+++...+.....  ..++|++|||||+|||....
T Consensus        61 -~-~--~~~~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          61 -A-Q--GPESGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             -h-c--CCCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence             0 0  01247899999999999986   9999999999876633222  23679999999999998754

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=1.1e-16  Score=104.22  Aligned_cols=116  Identities=17%  Similarity=0.251  Sum_probs=76.8

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|++++++||+++|||++....   +..+  +++..++                  ...+.++..........   
T Consensus         5 ~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~~~--~~l~~~~------------------~~~~~l~~~~~~~~~~~---   58 (122)
T cd08354           5 ALYVDDLEAAEAFYEDVLGLELMLKE---DRRL--AFFWVGG------------------RGMLLLFDPGATSTPGG---   58 (122)
T ss_pred             EEEeCCHHHHHHHHHhccCCEEeecC---CCce--EEEEcCC------------------CcEEEEEecCCcccccC---
Confidence            47899999999999999999988641   2222  3343322                  23444433221110000   


Q ss_pred             CCCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      ... .....+..|++|.++  |++++++++.++|+++...+.....++.+||+|||||+|||+++
T Consensus        59 ~~~-~~~~~~~~~~~~~v~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          59 EIP-PHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             CCC-CCCCCCccEEEEEcCHHHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            000 011236789999994  79999999999999987766433334578999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.74  E-value=3.6e-17  Score=107.21  Aligned_cols=119  Identities=24%  Similarity=0.376  Sum_probs=81.1

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecC-CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      .|.|+|++++++||+++|||+........ +.....+++..+                   +..+++..........  .
T Consensus         5 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~~~--~   63 (128)
T cd07249           5 GIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG-------------------NVQIELIEPLDDDSPI--A   63 (128)
T ss_pred             EEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC-------------------CEEEEEEEECCCCCcH--H
Confidence            37899999999999999999998765432 223344555532                   4677776543221110  0


Q ss_pred             CCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCC-CcccceEEEEECCC---CCEEEEec
Q 031774           80 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPD---DYWIEIFD  142 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPd---G~~iel~~  142 (153)
                      .+.  .....+..|++|.|+|+++++++++++|+++..+|. ....++.+++.||+   |++|||++
T Consensus        64 ~~~--~~~~~g~~h~~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          64 KFL--EKRGEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             HHH--hcCCCceEEEEEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            000  112347889999999999999999999999998775 33334444445554   99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.73  E-value=1.4e-16  Score=104.03  Aligned_cols=105  Identities=17%  Similarity=0.183  Sum_probs=72.5

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|+++|++||++ |||+.......   .+  +++..+                   +..+++.......  +    
T Consensus         7 ~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~~--~~~~~~-------------------~~~l~l~~~~~~~--~----   55 (120)
T cd08350           7 NLPSRDLDATEAFYAR-LGFSVGYRQAA---GY--MILRRG-------------------DLELHFFAHPDLD--P----   55 (120)
T ss_pred             eeEcCCHHHHHHHHHH-cCCEEEecCCC---CE--EEEEcC-------------------CEEEEEEecCcCC--C----
Confidence            4789999999999999 99998765321   22  333321                   3466665321110  0    


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEe-------ecCCCccc-ceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-------KKPDGGKL-KGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~-------~~~~~~~~-~~~~~~~DPdG~~iel~~~  143 (153)
                      .       ....|++|.++|+++++++|+++|+++.       .++....+ .+.++|+|||||+|||.|.
T Consensus        56 ~-------~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          56 A-------TSPFGCCLRLPDVAALHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             C-------CCcceEEEEeCCHHHHHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            0       1235899999999999999999999853       23332222 3578999999999999885

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=2e-16  Score=103.09  Aligned_cols=111  Identities=24%  Similarity=0.364  Sum_probs=75.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||+.......+  .+  ..+..+                   ...+++........ +.   .
T Consensus         9 l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~--~~~~~~-------------------~~~~~l~~~~~~~~-~~---~   61 (125)
T cd07253           9 LTVADIEATLDFYTRVLGMEVVRFGEEV--GR--KALRFG-------------------SQKINLHPVGGEFE-PA---A   61 (125)
T ss_pred             EEecCHHHHHHHHHHHhCceeecccccC--Cc--eEEEeC-------------------CEEEEEecCCCccC-cC---c
Confidence            7899999999999999999998754321  11  122211                   24566643222111 00   0


Q ss_pred             CCCCCCCCCcceEEEEeCC-HHHHHHHHHhcCCeEeecCCC--c--ccceEEEEECCCCCEEEEec
Q 031774           82 HNGNSEPRGFGHIGITVDD-VYKACERFERLGVEFAKKPDG--G--KLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~d-i~~~~~~l~~~G~~~~~~~~~--~--~~~~~~~~~DPdG~~iel~~  142 (153)
                         .....+..|++|.+++ +++++++|+++|+++...|..  +  ..++.+||+|||||+||+.+
T Consensus        62 ---~~~~~~~~hi~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          62 ---GSPGPGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             ---cCCCCCCceEEEEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence               1122477899999975 999999999999999876632  1  12357899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.73  E-value=2e-16  Score=103.33  Aligned_cols=117  Identities=21%  Similarity=0.291  Sum_probs=77.6

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCc-cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      .|.|+|++++++||+++|||+........+. .....++.....               .++..|++.........    
T Consensus         6 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~~~----   66 (126)
T cd08346           6 TLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLG---------------SPGTLLTFFEWPDAGPK----   66 (126)
T ss_pred             EEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCC---------------CCCCEEEEEecCCCCCC----
Confidence            3789999999999999999998876543221 112222322100               01456777643222110    


Q ss_pred             CCCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEe
Q 031774           80 GYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  141 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  141 (153)
                          ......+..|++|.++   ++++++++++++|+++...+.. ...+.+||+||+||+|||+
T Consensus        67 ----~~~~~~~~~hi~f~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          67 ----GRRGPGQIHHIAFSVPSEASLDAWRERLRAAGVPVSGVVDH-FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             ----CCCCCCcEEEEEEEcCCHHHHHHHHHHHHHcCCcccceEee-cceEEEEEECCCCCEEEeC
Confidence                0112246789999998   4799999999999998765433 2245789999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=9.4e-17  Score=105.32  Aligned_cols=115  Identities=17%  Similarity=0.140  Sum_probs=73.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||++ |||+.......+.  ... +. .++                  ...|.+........   +...
T Consensus         6 l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~~~-~~-~~~------------------~~~l~l~~~~~~~~---~~~~   59 (124)
T cd09012           6 LPVKDLEKSTAFYTA-LGFEFNPQFSDEK--AAC-MV-ISD------------------NIFVMLLTEDFFQT---FTPK   59 (124)
T ss_pred             eecCCHHHHHHHHHH-CCCEEccccCCCC--eEE-EE-ECC------------------ceEEEEEcHHHHhh---ccCC
Confidence            789999999999976 9999875433222  111 11 111                  23455543211000   0000


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEec
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  142 (153)
                      ......+.+..|++|.++   ++++++++++++|+++..+|....+++.+||+|||||+|||+.
T Consensus        60 ~~~~~~~~~~~~l~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          60 PIADTKKSTEVLISLSADSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CcccCCCCCeEEEEEeCCCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence            000011234579999998   5889999999999999988766555567899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.73  E-value=5.6e-16  Score=102.70  Aligned_cols=112  Identities=21%  Similarity=0.362  Sum_probs=79.1

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++||+++......+ .....+|+..++.                 ...+.+...  ..       
T Consensus         4 ~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~-----------------~~~l~~~~~--~~-------   56 (131)
T cd08343           4 VLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED-----------------HHDLALFPG--PE-------   56 (131)
T ss_pred             EEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC-----------------cceEEEEcC--CC-------
Confidence            37899999999999999999988664432 2233455553221                 234554321  00       


Q ss_pred             CCCCCCCCCCcceEEEEeCCH---HHHHHHHHhcCCeEeecCCCcc--cceEEEEECCCCCEEEEeccCcc
Q 031774           81 YHNGNSEPRGFGHIGITVDDV---YKACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLKTI  146 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di---~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~~~  146 (153)
                             ..++.|++|.|+|+   ++++++++++|+++...|....  ..+.+||+|||||.|||.+....
T Consensus        57 -------~~~~~hl~~~v~d~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~  120 (131)
T cd08343          57 -------RPGLHHVAFEVESLDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYR  120 (131)
T ss_pred             -------CCCeeEEEEEcCCHHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCcc
Confidence                   13678999999986   4788999999999987664322  23568899999999999986543

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.73  E-value=2.8e-16  Score=107.53  Aligned_cols=113  Identities=16%  Similarity=0.207  Sum_probs=77.8

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++..+..  .   ...+...+..                .+..|++........      
T Consensus         6 ~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~----------------~~~~l~l~~~~~~~~------   58 (157)
T cd08347           6 TLTVRDPEATAAFLTDVLGFREVGEEG--D---RVRLEEGGGG----------------PGAVVDVLEEPDQPR------   58 (157)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEeeeC--C---EEEEEecCCC----------------CCCEEEEEeCCCCCC------
Confidence            378999999999999999999987643  1   1222222100                146777765321110      


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .   .....++.|+||.|+|   +++++++|+++|+.+.... .....+.+||+|||||.|||.+..
T Consensus        59 ~---~~~~~~l~Hiaf~v~d~~dvd~~~~~L~~~Gv~~~~~~-~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          59 G---RPGAGTVHHVAFRVPDDEELEAWKERLEALGLPVSGIV-DRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             C---cccCCceEEEEEECCCHHHHHHHHHHHHHCCCCccccc-ccccEEEEEEECCCCcEEEEEECC
Confidence            0   1112478899999998   9999999999999765433 222345789999999999999864

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.73  E-value=2.4e-16  Score=105.57  Aligned_cols=109  Identities=21%  Similarity=0.362  Sum_probs=76.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....      ..+++..+                   +..+.+...  +.. +    .
T Consensus        10 L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~-------------------g~~l~l~~~--~~~-~----~   57 (139)
T PRK04101         10 FSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN-------------------GLWIALNEE--KDI-P----R   57 (139)
T ss_pred             EEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC-------------------CeEEEeecc--CCC-C----C
Confidence            78999999999999999999875421      12333322                   244444321  110 0    0


Q ss_pred             CCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCc-ccceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                         .....++.|++|.++  |+++++++++++|+++...+... ..++.+||+|||||+|||.+...
T Consensus        58 ---~~~~~~~~hiaf~v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~~  121 (139)
T PRK04101         58 ---NEIHQSYTHIAFSIEEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTGTL  121 (139)
T ss_pred             ---ccCCCCeeEEEEEecHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeCCH
Confidence               011236789999998  99999999999999987655332 23467899999999999998653

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.72  E-value=8.6e-17  Score=106.79  Aligned_cols=112  Identities=19%  Similarity=0.287  Sum_probs=76.9

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++.....  .    .+++..+                   +..+.+......   +    
T Consensus         5 ~l~V~Dl~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~-------------------~~~l~l~~~~~~---~----   52 (131)
T cd08363           5 TFSVSNLDKSISFYKHVFMEKLLVLGE--K----TAYFTIG-------------------GTWLALNEEPDI---P----   52 (131)
T ss_pred             EEEECCHHHHHHHHHHhhCCEEeccCC--c----cceEeeC-------------------ceEEEEEccCCC---C----
Confidence            378999999999999999999865321  1    1222221                   345555322110   0    


Q ss_pred             CCCCCCCCCCcceEEEEeCC--HHHHHHHHHhcCCeEeecCCCc-ccceEEEEECCCCCEEEEeccCccc
Q 031774           81 YHNGNSEPRGFGHIGITVDD--VYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLKTIG  147 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d--i~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~~~~  147 (153)
                      .   .....++.|++|.+++  +++++++|+++|+++...+... ..++.+||+|||||+|||.+.....
T Consensus        53 ~---~~~~~~~~hiaf~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~~~~  119 (131)
T cd08363          53 R---NEIRQSYTHIAFTIEDSEFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGTLAE  119 (131)
T ss_pred             c---CCcCccceEEEEEecHHHHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecCcHHH
Confidence            0   1112367899999984  9999999999999987554322 2346789999999999999976544

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.72  E-value=3.5e-16  Score=104.14  Aligned_cols=109  Identities=18%  Similarity=0.231  Sum_probs=75.3

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++||+++.....  .   ...|+..++..               ....+.+...  +.       
T Consensus         8 ~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~---------------~~~~i~l~~~--~~-------   58 (134)
T cd08360           8 VLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGG---------------DHHNLFLIKT--PA-------   58 (134)
T ss_pred             EEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCC---------------CCcEEEEecC--CC-------
Confidence            378999999999999999999876532  1   12345432100               1345555321  10       


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHH---HHHHhcCCeEeecCCCccc--ceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~---~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~  144 (153)
                            ...++.|++|.|+|++++.   ++|+++|+++...|.....  ..++||+||+||.|||....
T Consensus        59 ------~~~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          59 ------PMAGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             ------CCCcceEEEEEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccc
Confidence                  0137899999999988766   5999999998765533222  24689999999999998754

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.72  E-value=3.6e-16  Score=102.52  Aligned_cols=102  Identities=18%  Similarity=0.356  Sum_probs=71.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++|||+.....    ..+..  +..+.                  +..+++...  ..        
T Consensus        10 l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~~--~~~~~------------------~~~l~~~~~--~~--------   55 (123)
T cd08351          10 VPARDREASAEFYAEILGLPWAKPF----GPFAV--VKLDN------------------GVSLDFAQP--DG--------   55 (123)
T ss_pred             EEcCCHHHHHHHHHHhcCCEeeecc----CCEEE--EEcCC------------------CcEEEEecC--CC--------
Confidence            7899999999999999999987632    11211  21111                  234554321  10        


Q ss_pred             CCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCc--------ccceEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG--------KLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~--------~~~~~~~~~DPdG~~iel~~~  143 (153)
                            ..+..|++|.++  |+++++++++++|+++...|...        ..++.+||+|||||.|||++.
T Consensus        56 ------~~~~~h~a~~v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          56 ------EIPPQHYAFLVSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             ------CCCcceEEEEeCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence                  013479999887  69999999999999987665321        224689999999999999985

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PLN02300 lactoylglutathione lyase

Probab=99.71  E-value=4.5e-16  Score=116.03  Aligned_cols=124  Identities=31%  Similarity=0.554  Sum_probs=89.7

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++.+||+++|||++......++.++..+++..++..               ....+++....+..      +
T Consensus       159 ~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~lel~~~~~~~------~  217 (286)
T PLN02300        159 MLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPED---------------KTTVLELTYNYGVT------E  217 (286)
T ss_pred             EEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCC---------------CccEEEEeecCCCC------c
Confidence            37899999999999999999998755545555666666542210               02356664332211      1


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc--ceEEEEECCCCCEEEEeccCccccc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKTIGKI  149 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~~~  149 (153)
                      +..+    .+..|++|.|+|+++++++++++|+++..+|...+.  ++.++|+|||||.|+|++...+-|.
T Consensus       218 ~~~g----~~~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~  284 (286)
T PLN02300        218 YTKG----NAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKE  284 (286)
T ss_pred             cccC----CceeEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhh
Confidence            2112    377899999999999999999999999988754332  3578899999999999998776543

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.71  E-value=2.6e-16  Score=104.42  Aligned_cols=111  Identities=17%  Similarity=0.180  Sum_probs=73.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccE-EEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|++++++||+++||++...+........ ...+..                   .++..+++...  ...      
T Consensus        10 l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~i~l~~~--~~~------   62 (131)
T cd08364          10 LIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFL-------------------IGGLWIAIMEG--DSL------   62 (131)
T ss_pred             EEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEE-------------------cCCeEEEEecC--CCC------
Confidence            78999999999999999998765532111000 000110                   11345555421  110      


Q ss_pred             CCCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCc-ccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                            ..++..|++|.++  ++++++++|+++|+++..+.... ..++.+||+|||||.|||.....
T Consensus        63 ------~~~~~~Hiaf~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~~~  124 (131)
T cd08364          63 ------QERTYNHIAFKISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTGTL  124 (131)
T ss_pred             ------CCCCceEEEEEcCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecCCH
Confidence                  0125789999998  79999999999999886543211 12468999999999999998653

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.71  E-value=4.2e-16  Score=101.89  Aligned_cols=107  Identities=23%  Similarity=0.325  Sum_probs=72.9

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||++.....  +..   +++...+.               .....+.+.  ...        
T Consensus         9 ~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~~---~~~~~~~~---------------~~~~~~~l~--~~~--------   58 (122)
T cd07265           9 QLRVLDLEEAIKHYREVLGLDEVGRDD--QGR---VYLKAWDE---------------FDHHSIVLR--EAD--------   58 (122)
T ss_pred             EEEeCCHHHHHHHHHhccCCEeeeecC--Cce---EEEEccCC---------------CcccEEEec--cCC--------
Confidence            378999999999999999999876532  111   22322110               002233331  100        


Q ss_pred             CCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCc--ccceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iel~~~~  144 (153)
                             ..+..|++|.++   |+++++++|+++|+++...|...  ..+..+||+|||||+|||+...
T Consensus        59 -------~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          59 -------TAGLDFMGFKVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             -------CCCeeEEEEEeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence                   125789999997   79999999999999988655322  2245789999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.71  E-value=5.4e-16  Score=105.74  Aligned_cols=110  Identities=21%  Similarity=0.324  Sum_probs=75.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecC---CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP---EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   78 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   78 (153)
                      |.|+|++++++||+++|||++......+   +.....+|+..++.                 ++.+.+...  +      
T Consensus        15 l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~i~~~~~--~------   69 (154)
T cd07237          15 LATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR-----------------HHSLALAEG--P------   69 (154)
T ss_pred             EEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC-----------------CCCEEEEcC--C------
Confidence            7899999999999999999987643221   11223444443211                 233444211  0      


Q ss_pred             CCCCCCCCCCCCcceEEEEeCCHH---HHHHHHHhcCCeEeecCCCcc--cceEEEEECCCCCEEEEeccC
Q 031774           79 KGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        79 ~~~~~~~~~~~g~~hl~f~v~di~---~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~  144 (153)
                              .+.++.||+|.|+|++   +++++|+++|+++...+....  ..+.+|++||+||.|||....
T Consensus        70 --------~~~g~~Hiaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~  132 (154)
T cd07237          70 --------GPKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGG  132 (154)
T ss_pred             --------CCceeEEEEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCc
Confidence                    1137889999998755   689999999999987663322  235789999999999998753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.71  E-value=3.3e-16  Score=102.32  Aligned_cols=104  Identities=21%  Similarity=0.283  Sum_probs=72.1

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||++.....  . .  ..++..++.                 +..+.+..  .+        
T Consensus         7 ~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~-~--~~~~~~~~~-----------------~~~~~l~~--~~--------   54 (120)
T cd07252           7 GVESSDLDAWRRFATDVLGLQVGDRPE--D-G--ALYLRMDDR-----------------AWRIAVHP--GE--------   54 (120)
T ss_pred             EEEeCCHHHHHHHHHhccCceeccCCC--C-C--eEEEEccCC-----------------ceEEEEEe--CC--------
Confidence            478999999999999999999865421  1 1  223332211                 23444421  11        


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCC----cccceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~  143 (153)
                             ..+..|++|.+++   +++++++|+++|+++...+..    ...++.+||+|||||.|||+..
T Consensus        55 -------~~~~~~~~f~v~~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          55 -------ADDLAYAGWEVADEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             -------CCceeEEEEEECCHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence                   0256799999974   999999999999999865421    1123578999999999999864

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=8e-16  Score=100.70  Aligned_cols=112  Identities=25%  Similarity=0.410  Sum_probs=76.7

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|++++++||+++|||++....   + .  .+++..++.                 ...|.+........      
T Consensus         7 ~l~v~d~~~~~~Fy~~~lG~~~~~~~---~-~--~~~l~~~~~-----------------~~~l~l~~~~~~~~------   57 (125)
T cd07255           7 TLRVADLERSLAFYQDVLGLEVLERT---D-S--TAVLGTGGK-----------------RPLLVLEEDPDAPP------   57 (125)
T ss_pred             EEEECCHHHHHHHHHhccCcEEEEcC---C-C--EEEEecCCC-----------------eEEEEEEeCCCCCc------
Confidence            37899999999999999999998762   1 1  233443210                 24555543221100      


Q ss_pred             CCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      .   .....+..|++|.++   ++++++++|+++|+++..+... ..++.+||+|||||+|||....+
T Consensus        58 ~---~~~~~~~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          58 A---PPGATGLYHFAILLPSRADLAAALRRLIELGIPLVGASDH-LVSEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             c---cCCCCcEEEEEEECCCHHHHHHHHHHHHHcCCceeccccc-cceeEEEEECCCCCEEEEEEecC
Confidence            0   011236789999997   4999999999999987654332 23457899999999999987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.70  E-value=8.3e-16  Score=105.54  Aligned_cols=109  Identities=20%  Similarity=0.333  Sum_probs=71.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++|||++......+.......++..++.                 ...+.+..  +          
T Consensus         9 l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~i~l~~--~----------   59 (161)
T cd07256           9 LRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG-----------------VHDTALTG--G----------   59 (161)
T ss_pred             EecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC-----------------cceEEEec--C----------
Confidence            789999999999999999998754432222222344432211                 22333321  0          


Q ss_pred             CCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeE--eecCCC-ccc-ceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDD---VYKACERFERLGVEF--AKKPDG-GKL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~--~~~~~~-~~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                           ...++.|++|.++|   +++++++|+++|+.+  ...|.. +.. ..++||+|||||+|||+...
T Consensus        60 -----~~~~~~Hiaf~v~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          60 -----NGPRLHHVAFWVPEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             -----CCCceeEEEEEcCCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence                 01267899999986   788889999999863  233321 211 24689999999999998644

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=1.6e-15  Score=99.75  Aligned_cols=113  Identities=19%  Similarity=0.292  Sum_probs=77.9

Q ss_pred             CeeecChhhhHHHHhhhc---CCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVL---GMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   77 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   77 (153)
                      .|.|+|++++++||+++|   ||++.....  . ..  .|....                  ++..+.+........ +.
T Consensus         6 ~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~-~~--~~~~~~------------------~~~~i~l~~~~~~~~-~~   61 (128)
T cd07242           6 ELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D-GR--SWRAGD------------------GGTYLVLQQADGESA-GR   61 (128)
T ss_pred             EEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c-Cc--eEEecC------------------CceEEEEEecccCCC-cc
Confidence            378999999999999999   999987642  1 11  122111                  146677754322211 10


Q ss_pred             CCCCCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCC----cccceEEEEECCCCCEEEEecc
Q 031774           78 FKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        78 ~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~  143 (153)
                         ..   ....++.|++|.|+   |+++++++|+++|+.+...+..    ....+.+|++|||||+|||+.+
T Consensus        62 ---~~---~~~~g~~hia~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          62 ---HD---RRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             ---cc---cCCcCeeEEEEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence               10   12247789999997   4899999999999999987653    2224578999999999999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=5.7e-16  Score=100.28  Aligned_cols=102  Identities=21%  Similarity=0.246  Sum_probs=69.1

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||++ |||++....+    .+  +++..+                   +..+.+.......       
T Consensus         6 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~--~~l~~~-------------------~~~l~l~~~~~~~-------   52 (113)
T cd08356           6 FIPAKDFAESKQFYQA-LGFELEWEND----NL--AYFRLG-------------------NCAFYLQDYYVKD-------   52 (113)
T ss_pred             ccccccHHHHHHHHHH-hCCeeEecCC----CE--EEEEcC-------------------CEEEEeecCCCcc-------
Confidence            4789999999999987 9999987531    12  334332                   2344442211000       


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEe-----ecCCC-cccceEEEEECCCCCEEEEec
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-----KKPDG-GKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~-----~~~~~-~~~~~~~~~~DPdG~~iel~~  142 (153)
                      .       ....+++|.|+|+++++++|+++|+++.     .++.. ..+.+.++|+|||||+|+|.+
T Consensus        53 ~-------~~~~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          53 W-------AENSMLHLEVDDLEAYYEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             c-------ccCCEEEEEECCHHHHHHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            0       1235899999999999999999998743     22222 223468999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.69  E-value=6.2e-16  Score=99.50  Aligned_cols=105  Identities=22%  Similarity=0.355  Sum_probs=71.6

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||+......  . .   .++..+                   +..+.+...  +...     
T Consensus         3 ~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~-~---~~~~~~-------------------~~~l~~~~~--~~~~-----   50 (113)
T cd08345           3 TLIVKDLNKSIAFYRDILGAELIYSSS--K-E---AYFELA-------------------GLWICLMEE--DSLQ-----   50 (113)
T ss_pred             eEEECCHHHHHHHHHHhcCCeeeeccC--c-e---eEEEec-------------------CeEEEeccC--CCcC-----
Confidence            478999999999999999999876532  1 1   122211                   233443211  1100     


Q ss_pred             CCCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCC-CcccceEEEEECCCCCEEEEec
Q 031774           81 YHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPdG~~iel~~  142 (153)
                           ....+..|++|.++  |+++++++++++|+++...+. ....++.+|++|||||+|||+.
T Consensus        51 -----~~~~~~~hiaf~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          51 -----GPERTYTHIAFQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             -----CCCCCccEEEEEcCHHHHHHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEe
Confidence                 01235689999995  799999999999999875432 2223457899999999999985

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.69  E-value=7.7e-16  Score=100.55  Aligned_cols=105  Identities=19%  Similarity=0.242  Sum_probs=71.4

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||++..+..  .    .+++...+..               ....+.+...  +        
T Consensus        11 ~l~v~dl~~a~~FY~~~lG~~~~~~~~--~----~~~l~~~~~~---------------~~~~~~l~~~--~--------   59 (121)
T cd09013          11 ELLTPKPEESLWFFTDVLGLEETGREG--Q----SVYLRAWGDY---------------EHHSLKLTES--P--------   59 (121)
T ss_pred             EEEeCCHHHHHHHHHhCcCCEEEeecC--C----eEEEEeccCC---------------CccEEEEeeC--C--------
Confidence            378999999999999999999886532  1    2334321100               0233444210  0        


Q ss_pred             CCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                             ..+..|++|.++   ++++++++++++|+++...+.....+..+||+|||||.|||.-.
T Consensus        60 -------~~~~~h~af~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          60 -------EAGLGHIAWRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             -------CCceEEEEEEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEe
Confidence                   126789999997   58899999999999875332211224468999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.69  E-value=1.6e-15  Score=104.68  Aligned_cols=111  Identities=19%  Similarity=0.313  Sum_probs=74.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......+.......|+....                 ....+.+..  ...        
T Consensus        12 l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~i~l~~--~~~--------   64 (166)
T cd09014          12 LLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSN-----------------KVHDVAYTR--DPA--------   64 (166)
T ss_pred             EEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCC-----------------CceeEEEec--CCC--------
Confidence            78999999999999999999876643332222233443211                 012333321  110        


Q ss_pred             CCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCC-cccc-eEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG-GKLK-GVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~-~~~~-~~~~~~DPdG~~iel~~~  143 (153)
                          ....++.|+||.|+|   +++++++|+++|+++...|.. +... .++|++|||||+|||++.
T Consensus        65 ----~~~~~~~hiaf~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          65 ----GARGRLHHLAYALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ----CCCCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence                012367899999986   558889999999998755533 2222 358899999999999886

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.69  E-value=1.4e-15  Score=102.54  Aligned_cols=104  Identities=20%  Similarity=0.377  Sum_probs=73.1

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  +   ...|+..+..                 ...+.+..  ..         
T Consensus        10 i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~-----------------~~~~~l~~--~~---------   56 (144)
T cd07239          10 LNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSD-----------------HHSIAIAR--GP---------   56 (144)
T ss_pred             EECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCC-----------------cceEEEcc--CC---------
Confidence            78999999999999999999864421  1   1234543221                 23444421  00         


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHH---HHHHhcCCeEeecCCC-ccc-ceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDG-GKL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~---~~l~~~G~~~~~~~~~-~~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                            ..++.|++|.|+|++++.   ++|+++|+++...+.. +.. ..++||+||+||.|||++..
T Consensus        57 ------~~~~~hiaf~v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          57 ------HPSLNHVAFEMPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             ------CCceEEEEEECCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence                  126789999999877775   8999999999876532 222 34678999999999999864

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.68  E-value=3.6e-15  Score=98.90  Aligned_cols=114  Identities=25%  Similarity=0.410  Sum_probs=77.3

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++......  .  ...++..+..                ....+.+........      
T Consensus         6 ~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~~----------------~~~~l~l~~~~~~~~------   59 (134)
T cd08348           6 VLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDPD----------------EHHQIALITGRPAAP------   59 (134)
T ss_pred             EEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecCC----------------CceEEEEEecCCCCC------
Confidence            3789999999999999999998765431  1  2234432200                134566643221110      


Q ss_pred             CCCCCCCCCCcceEEEEeCCHH---HHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~---~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                          .....++.|++|.|+|.+   +++++|+++|+++...+..+. ++.+|++||+||.|||+....
T Consensus        60 ----~~~~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          60 ----PPGPAGLNHIAFEVDSLDDLRDLYERLRAAGITPVWPVDHGN-AWSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             ----CCCCCCceEEEEEeCCHHHHHHHHHHHHHCCCCccccCCCCc-eeEEEEECCCCCEEEEEEcCC
Confidence                011247789999999755   688999999998887654332 356899999999999997653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.67  E-value=3.1e-15  Score=94.68  Aligned_cols=109  Identities=29%  Similarity=0.380  Sum_probs=78.7

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++||++.........  ....++..+                   +..+++........      
T Consensus         3 ~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~-------------------~~~i~l~~~~~~~~------   55 (112)
T cd06587           3 GLTVSDLEAAVAFYEEVLGFEVLFRNGNGG--AEFAVLGLG-------------------GTRLELFEGDEPAP------   55 (112)
T ss_pred             ceeeCCHHHHHHHHHhccCCEEEEeeccCC--EEEEEEecC-------------------CceEEEecCCCCCC------
Confidence            378999999999999999999888754211  223334321                   36777764322111      


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCC-CcccceEEEEECCCCCEEEE
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPDDYWIEI  140 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPdG~~iel  140 (153)
                      .    ....+..|++|.++|+++++++|.++|+.+...+. .......+|+.||+||.|||
T Consensus        56 ~----~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          56 A----PSGGGGVHLAFEVDDVDAAYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             c----ccCCCeeEEEEECCCHHHHHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            0    11236789999999999999999999999888764 33334689999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=2e-15  Score=98.04  Aligned_cols=114  Identities=17%  Similarity=0.123  Sum_probs=73.7

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|.+||+++|||++....   ...+  .++..+                   +..+++...........   
T Consensus         3 ~l~v~d~~~a~~FY~~~lg~~~~~~~---~~~~--~~~~~~-------------------~~~~~l~~~~~~~~~~~---   55 (121)
T cd07251           3 TLGVADLARSRAFYEALLGWKPSADS---NDGV--AFFQLG-------------------GLVLALFPREELAKDAG---   55 (121)
T ss_pred             eEeeCCHHHHHHHHHHhcCceecccC---CCce--EEEEcC-------------------CeEEEEecchhhhhhcC---
Confidence            47899999999999999999987651   1122  233321                   34566643211110000   


Q ss_pred             CCCCCCCCCCcceEEEEe---CCHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEec
Q 031774           81 YHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~  142 (153)
                      .... ....+..|++|.+   +|++++++++++.|+++..++...++ ++.+|++||+||+|||..
T Consensus        56 ~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          56 VPVP-PPGFSGITLAHNVRSEEEVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCCC-CCCccceEEEEEcCCHHHHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            0000 1112334666665   57999999999999999887754443 467899999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.67  E-value=1.6e-15  Score=99.66  Aligned_cols=103  Identities=18%  Similarity=0.277  Sum_probs=71.6

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||++..+..  .    ..|+..++.                 +..+.+..  +.        
T Consensus        11 ~l~v~d~~~s~~FY~~vLG~~~~~~~~--~----~~~l~~~~~-----------------~~~i~l~~--~~--------   57 (124)
T cd08361          11 RLGTRDLAGATRFATDILGLQVAERTA--K----ATYFRSDAR-----------------DHTLVYIE--GD--------   57 (124)
T ss_pred             EEeeCCHHHHHHHHHhccCceeccCCC--C----eEEEEcCCc-----------------cEEEEEEe--CC--------
Confidence            378999999999999999999875421  1    234443211                 23333321  11        


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCC----cccceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                              .+..|++|.+++   +++++++++++|+++...+..    ...+.++||+|||||.|||+...
T Consensus        58 --------~~~~~iaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          58 --------PAEQASGFELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             --------CceEEEEEEECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence                    134699999985   999999999999998765421    11134678999999999998643

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.67  E-value=2.6e-15  Score=97.02  Aligned_cols=103  Identities=13%  Similarity=0.099  Sum_probs=69.8

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||++ |||+...+.   +.   .+++..++.                 ...+.+. ..+.        
T Consensus         8 ~l~v~Dl~~s~~FY~~-lGl~~~~~~---~~---~~~~~~~~~-----------------~~~~~~~-~~~~--------   54 (113)
T cd07267           8 RFEHPDLDKAERFLTD-FGLEVAART---DD---ELYYRGYGT-----------------DPFVYVA-RKGE--------   54 (113)
T ss_pred             EEccCCHHHHHHHHHH-cCCEEEEec---CC---eEEEecCCC-----------------ccEEEEc-ccCC--------
Confidence            3789999999999999 999987552   11   123332110                 1222221 1110        


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                             ..++.|++|.|+|.+++.+.+++.|..+...+.....++.+||+|||||.|||+-.
T Consensus        55 -------~~~~~~~af~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          55 -------KARFVGAAFEAASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             -------cCcccEEEEEECCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEec
Confidence                   12678999999999999999999999877544311224578999999999999753

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.67  E-value=1.2e-16  Score=104.38  Aligned_cols=116  Identities=29%  Similarity=0.409  Sum_probs=75.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeec--CCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDF--PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   78 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   78 (153)
                      .|.|+|++++++||+++|||++......  ........++..+                   ...+++.....+......
T Consensus         6 ~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~~~~~~   66 (128)
T PF00903_consen    6 AIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIG-------------------EGHIELFLNPSPPPRASG   66 (128)
T ss_dssp             EEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEEST-------------------SSCEEEEEEESSSSSSEE
T ss_pred             EEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccc-------------------ccceeeeeeccccccccc
Confidence            3789999999999999999999987662  2222333444432                   345666554433321100


Q ss_pred             CCCCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccc--eEEEEECCCCCEEEE
Q 031774           79 KGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK--GVAFIKDPDDYWIEI  140 (153)
Q Consensus        79 ~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~--~~~~~~DPdG~~iel  140 (153)
                      ... .+    .+..|+++.+.   |+++++++|++.|+++...|.....+  ..+|++||+||.|||
T Consensus        67 ~~~-~~----~~~~~i~~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   67 HSF-PE----HGGHHIAFLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EHH-HS----HTSEEEEEEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             ccc-cc----ccceeEEEEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            000 00    02346666654   68899999999999999887443332  245799999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.67  E-value=3.1e-15  Score=100.59  Aligned_cols=106  Identities=18%  Similarity=0.202  Sum_probs=73.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++..+..  .   ..+|+...+..               ....+.+    .+         
T Consensus         5 l~V~Dle~s~~Fy~~vLG~~~~~~~~--~---~~~~l~~~~~~---------------~~h~~~~----~~---------   51 (141)
T cd07258           5 IGSENFEASRDSLVEDFGFRVSDLIE--D---RIVFMRCHPNP---------------FHHTFAV----GP---------   51 (141)
T ss_pred             EecCCHHHHHHHHHhcCCCEeeeeeC--C---EEEEEEcCCCC---------------Ccceeee----cc---------
Confidence            78999999999999999999886642  1   24566542210               0111211    01         


Q ss_pred             CCCCCCCCCcceEEEEeCCH---HHHHHHHHhcCCeEeecCCCcc--cceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDDV---YKACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di---~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~  144 (153)
                          ....+++|++|.|+|+   ++++++|+++|+++...|....  ..+.+||+||+|+.|||.-..
T Consensus        52 ----~~~~gl~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  115 (141)
T cd07258          52 ----ASSSHFHHVNFMVTDIDDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGM  115 (141)
T ss_pred             ----CCCCceEEEEEECCCHHHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCc
Confidence                0123889999999864   5779999999999887664321  235789999999999998754

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.67  E-value=2.3e-15  Score=97.31  Aligned_cols=104  Identities=24%  Similarity=0.391  Sum_probs=74.3

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++.....  .    .+++..+..                ....+.+...  +        
T Consensus         7 ~l~v~d~~~~~~FY~~~lg~~~~~~~~--~----~~~~~~~~~----------------~~~~~~~~~~--~--------   54 (117)
T cd07240           7 ELEVPDLERALEFYTDVLGLTVLDRDA--G----SVYLRCSED----------------DHHSLVLTEG--D--------   54 (117)
T ss_pred             EEecCCHHHHHHHHHhccCcEEEeecC--C----eEEEecCCC----------------CcEEEEEEeC--C--------
Confidence            378999999999999999999987542  1    233332210                1233444211  1        


Q ss_pred             CCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcc-cceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~  143 (153)
                             ..+..|++|.++   ++++++++++++|+++...+...+ .++.+|+.||+||+||++..
T Consensus        55 -------~~~~~h~~~~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          55 -------EPGVDALGFEVASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             -------CCCceeEEEEcCCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence                   125689999997   689999999999999988774333 24578999999999999864

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.67  E-value=1.9e-15  Score=98.80  Aligned_cols=104  Identities=21%  Similarity=0.298  Sum_probs=72.4

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++.....  +.    .++..+                   ...+.+......        
T Consensus         6 ~l~v~d~~~~~~FY~~vLG~~~~~~~~--~~----~~~~~~-------------------~~~~~l~~~~~~--------   52 (121)
T cd07244           6 TLAVSDLERSVAFYVDLLGFKLHVRWD--KG----AYLEAG-------------------DLWLCLSVDANV--------   52 (121)
T ss_pred             EEEECCHHHHHHHHHHhcCCEEEEecC--Cc----eEEecC-------------------CEEEEEecCCCC--------
Confidence            378999999999999999999876532  21    222221                   223333211110        


Q ss_pred             CCCCCCCCCCcceEEEEe--CCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v--~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                           ....+..|++|.+  +|+++++++++++|+++..++...  +..+||.|||||.|||+...
T Consensus        53 -----~~~~~~~hi~f~v~~~dl~~~~~~l~~~G~~~~~~~~~~--~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          53 -----GPAKDYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSE--GDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             -----CCCCCeeeEEEEeCHHHHHHHHHHHHHcCCcccCCCCCC--ccEEEEECCCCCEEEEEeCC
Confidence                 0112567999999  579999999999999887655432  34689999999999999854

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=1.7e-15  Score=98.94  Aligned_cols=114  Identities=21%  Similarity=0.324  Sum_probs=69.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||++.....    .+  ..+...                   +..+.+...........   
T Consensus         4 ~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~-------------------~~~~~l~~~~~~~~~~~---   55 (125)
T cd08357           4 AIPVRDLEAARAFYGDVLGCKEGRSSE----TW--VDFDFF-------------------GHQLVAHLSPNFNADAS---   55 (125)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeccC----Cc--cccccc-------------------CcEEEEEeccCCCcccc---
Confidence            478999999999999999999865321    11  112211                   12233221111100000   


Q ss_pred             CCCCCCCCCCcceEE--EEeCCHHHHHHHHHhcCCeEeecCCC---cc--cceEEEEECCCCCEEEEec
Q 031774           81 YHNGNSEPRGFGHIG--ITVDDVYKACERFERLGVEFAKKPDG---GK--LKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~--f~v~di~~~~~~l~~~G~~~~~~~~~---~~--~~~~~~~~DPdG~~iel~~  142 (153)
                      .........+..|++  |.++|+++++++|+++|+++..+|..   +.  ..+.+||+|||||+|||..
T Consensus        56 ~~~~~~~~~~~~h~~~~~~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          56 DNAVDGHPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             cCCCCCCccCCceEEEEEeHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            000001112445765  46689999999999999999876632   11  1357899999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=4.4e-15  Score=96.68  Aligned_cols=106  Identities=26%  Similarity=0.417  Sum_probs=72.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++||++......  +  . ..|...+.                  ...+.+..  ....      
T Consensus         6 ~l~v~d~~~a~~FY~~~lG~~~~~~~~--~--~-~~~~~~~~------------------~~~~~~~~--~~~~------   54 (120)
T cd07254           6 ALNVDDLEASIAFYSKLFGVEPTKVRD--D--Y-AKFLLEDP------------------RLNFVLNE--RPGA------   54 (120)
T ss_pred             EEEeCCHHHHHHHHHHHhCCeEecccC--C--e-eEEEecCC------------------ceEEEEec--CCCC------
Confidence            378999999999999999998765431  1  1 12221110                  12233321  1110      


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcc---cceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGK---LKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~---~~~~~~~~DPdG~~iel~~~  143 (153)
                            ...+..|++|.+++   ++++++++.++|+++...+....   ..+.+|++||+||+|||+..
T Consensus        55 ------~~~~~~h~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          55 ------PGGGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             ------CCCCeeEEEEEeCCHHHHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence                  00367899999987   88999999999999987664322   13478999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.66  E-value=2.4e-15  Score=98.14  Aligned_cols=52  Identities=19%  Similarity=0.242  Sum_probs=43.7

Q ss_pred             CcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEe
Q 031774           90 GFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  141 (153)
Q Consensus        90 g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  141 (153)
                      +..|++|.++   |+++++++|+++|+++..+|...+++ +.++|+|||||+|||.
T Consensus        66 ~~~~l~~~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          66 HRIALAFLCETPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CcEEEEEEcCCHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence            4568888875   89999999999999988877655554 5789999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.65  E-value=4.1e-15  Score=96.64  Aligned_cols=104  Identities=18%  Similarity=0.226  Sum_probs=71.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||+......    ..  +++...+.                ..+.+.+.   ...        
T Consensus         9 l~v~d~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~~----------------~~~~~~~~---~~~--------   55 (120)
T cd08362           9 LGVPDLAAAAAFYREVWGLSVVAEDD----GI--VYLRATGS----------------EHHILRLR---RSD--------   55 (120)
T ss_pred             EecCCHHHHHHHHHhCcCcEEEEecC----CE--EEEECCCC----------------ccEEEEec---cCC--------
Confidence            78999999999999999999875421    12  23332110                01222221   110        


Q ss_pred             CCCCCCCCCcceEEEEe---CCHHHHHHHHHhcCCeEeecCCC--cc-cceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG--GK-LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~--~~-~~~~~~~~DPdG~~iel~~~~  144 (153)
                            ..+..|++|.+   +++++++++|+++|+++..++..  .+ .++.++|+||+||.|||+...
T Consensus        56 ------~~~~~~~~~~v~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          56 ------RNRLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             ------CCCCceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence                  11567999999   46999999999999998876521  22 245789999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=5.5e-15  Score=96.56  Aligned_cols=108  Identities=18%  Similarity=0.152  Sum_probs=72.1

Q ss_pred             CeeecChhhhHHHHhhh---cCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRV---LGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   77 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   77 (153)
                      +|.|+|+++|++||+++   ||++...+.  .+ .+ ..+ ...+                 +...+.+........   
T Consensus         5 ~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~-~~-~~~-~~~~-----------------~~~~~~l~~~~~~~~---   59 (123)
T cd07262           5 TLGVNDLERARAFYDAVLAPLGIKRVMED--GP-GA-VGY-GKGG-----------------GGPDFWVTKPFDGEP---   59 (123)
T ss_pred             EEecCcHHHHHHHHHHHHhhcCceEEeec--CC-ce-eEe-ccCC-----------------CCceEEEeccccCCC---
Confidence            47899999999999998   688887553  11 12 222 2111                 135566643211100   


Q ss_pred             CCCCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcc----cceEEEEECCCCCEEEEe
Q 031774           78 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGK----LKGVAFIKDPDDYWIEIF  141 (153)
Q Consensus        78 ~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~----~~~~~~~~DPdG~~iel~  141 (153)
                         .     ...+..|++|.|++   +++++++++++|+.+...|....    ..+.+||+|||||.|||+
T Consensus        60 ---~-----~~~~~~hi~f~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          60 ---A-----TAGNGTHVAFAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             ---C-----CCCCceEEEEECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence               0     11245799999986   78899999999999887764322    223689999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=99.65  E-value=5.8e-15  Score=97.71  Aligned_cols=55  Identities=18%  Similarity=0.141  Sum_probs=44.7

Q ss_pred             CcceEEEEe---CCHHHHHHHHHhcCCeEeecCCCc---ccc-eEEEEECCCCCEEEEeccC
Q 031774           90 GFGHIGITV---DDVYKACERFERLGVEFAKKPDGG---KLK-GVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        90 g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~---~~~-~~~~~~DPdG~~iel~~~~  144 (153)
                      |..|+||.+   +++++++++|+++|+++..+|...   ..+ +.+||+|||||.|||....
T Consensus        63 g~~h~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         63 GPRHICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             CceeEEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            668999998   689999999999999998666331   123 5788999999999998753

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.62  E-value=1.3e-14  Score=108.75  Aligned_cols=108  Identities=21%  Similarity=0.334  Sum_probs=72.0

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccE-EEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      .|.|+|++++++||+++|||++......+.... ...|+..+..                 ...+.+..  .        
T Consensus       150 ~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~--~--------  202 (303)
T TIGR03211       150 LLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK-----------------AHDIAFVG--D--------  202 (303)
T ss_pred             eEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC-----------------Ccccceec--C--------
Confidence            378999999999999999999876544332221 2334432110                 11122110  0        


Q ss_pred             CCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCC-cc-cceEEEEECCCCCEEEEe
Q 031774           80 GYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIF  141 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iel~  141 (153)
                            ..+++++|+||.|+|   +++++++|+++|+++...|.. +. .+.++||+|||||+|||.
T Consensus       203 ------~~~g~~~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       203 ------PEPGKLHHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             ------CCCCceEEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence                  011247899999996   556888999999998876642 22 235799999999999997

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.62  E-value=8.4e-15  Score=95.42  Aligned_cols=104  Identities=26%  Similarity=0.321  Sum_probs=70.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....    .+  +++......               ....+.+..  .+         
T Consensus        10 l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~--~~~~~~~~~---------------~~~~~~~~~--~~---------   57 (121)
T cd07266          10 LRVTDLEKSREFYVDVLGLVETEEDD----DR--IYLRGLEEF---------------IHHSLVLTK--AP---------   57 (121)
T ss_pred             EEcCCHHHHHHHHHhccCCEEeccCC----Ce--EEEEecCCC---------------ceEEEEEee--CC---------
Confidence            78999999999999999999875421    11  233211100               012333321  10         


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCC-Cccc-ceEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD-GGKL-KGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~-~~~~-~~~~~~~DPdG~~iel~~~  143 (153)
                            ..+..|++|.+.   |+++++++++++|+++...|. ..+. +..+|+.|||||+|||+..
T Consensus        58 ------~~~~~hi~~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          58 ------VAGLGHIAFRVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             ------CCceeEEEEECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence                  126789999994   799999999999999876532 2222 3578999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.61  E-value=2.4e-14  Score=92.28  Aligned_cols=100  Identities=20%  Similarity=0.336  Sum_probs=65.1

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+ .|||++..+.   + ..  .+...+.                 ....+.+..  ...        
T Consensus         8 l~v~d~~~s~~FY~-~lG~~~~~~~---~-~~--~~~~~~~-----------------~~~~~~~~~--~~~--------   53 (112)
T cd08344           8 LEVPDLEVARRFYE-AFGLDVREEG---D-GL--ELRTAGN-----------------DHRWARLLE--GAR--------   53 (112)
T ss_pred             EecCCHHHHHHHHH-HhCCcEEeec---C-ce--EEEecCC-----------------CceEEEeec--CCC--------
Confidence            78999999999997 6999987542   1 11  1211111                 012233321  110        


Q ss_pred             CCCCCCCCCcce--EEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGH--IGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~h--l~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                             .+..|  +.+.++|+++++++++++|+++...+... ..+.+||.|||||.|||...
T Consensus        54 -------~~~~~~~~~~~~~d~~~~~~~l~~~Gi~~~~~~~~~-~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          54 -------KRLAYLSFGIFEDDFAAFARHLEAAGVALAAAPPGA-DPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             -------CceeeEEEEeEhhhHHHHHHHHHHcCCceecCCCcC-CCCEEEEECCCCCEEEEecC
Confidence                   12334  55556899999999999999988665222 23468999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.60  E-value=4.4e-14  Score=92.19  Aligned_cols=111  Identities=18%  Similarity=0.240  Sum_probs=77.3

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||.++||++........+..+  .....++..  +             +..+.-    .+.       .
T Consensus        15 i~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y--~~f~~~~~~--~-------------gG~l~~----~~~-------~   66 (127)
T COG3324          15 LPVSDLERAKAFYEKVFGWTFEDYFDMGEMRY--AVFPADGAG--A-------------GGGLMA----RPG-------S   66 (127)
T ss_pred             eecCCHHHHHHHHHHhhCceecccccCCCceE--EEEECCCcc--c-------------cceecc----CCc-------C
Confidence            67999999999999999999998755433332  323222110  0             011110    000       1


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcc-cceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  144 (153)
                      ..+    .+..++.|.|+|+++..+|..++|.+++.++..-+ .++.+.+.||+||+|.|+++.
T Consensus        67 ~p~----~~~~~iy~~v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          67 PPG----GGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CCC----CCCEEEEEecCChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence            110    23458889999999999999999999999997765 567788999999999999753

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.58  E-value=5.1e-14  Score=104.88  Aligned_cols=109  Identities=22%  Similarity=0.399  Sum_probs=72.8

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCC--c-cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--M-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   77 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   77 (153)
                      .|.|+|++++++||+++|||++......+.  + .+..+|+..++.                 ++.+.+..  .+     
T Consensus       147 ~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~-----------------~~~~~l~~--~~-----  202 (286)
T TIGR03213       147 VLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER-----------------HHSLAFAA--GP-----  202 (286)
T ss_pred             EEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC-----------------cceEEEec--CC-----
Confidence            378999999999999999999876543211  1 122445544221                 23333321  11     


Q ss_pred             CCCCCCCCCCCCCcceEEEEeCCHHH---HHHHHHhcCCeEeecCCC-cc-cceEEEEECCCCCEEEEecc
Q 031774           78 FKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        78 ~~~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iel~~~  143 (153)
                               ...+++|++|+|+|+++   ++++|+++|+ ....+.. +. ...++|++||+||+||+...
T Consensus       203 ---------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       203 ---------SEKRLNHLMLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             ---------CCCceEEEEEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence                     11368899999998776   8999999999 5444422 22 23478999999999999863

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.58  E-value=6.5e-14  Score=104.56  Aligned_cols=109  Identities=25%  Similarity=0.401  Sum_probs=72.3

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++|||++......+.......++..+..                 .+.+.+..  .          
T Consensus       142 l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~--~----------  192 (294)
T TIGR02295       142 VFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG-----------------VHDIALTN--G----------  192 (294)
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC-----------------cCceEeec--C----------
Confidence            789999999999999999998765433333333344432110                 12232210  0          


Q ss_pred             CCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCe--EeecCCC-cc-cceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDD---VYKACERFERLGVE--FAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~--~~~~~~~-~~-~~~~~~~~DPdG~~iel~~~~  144 (153)
                           ...+++|+||.|+|   +++++++|+++|++  +...|.. +. ...++|++||+||+|||....
T Consensus       193 -----~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       193 -----NGPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             -----CCCceeeEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence                 01378999999998   55678999999987  5444422 21 124689999999999998743

The enzyme from Bacillus brevis contains manganese.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.52  E-value=2.5e-13  Score=101.87  Aligned_cols=107  Identities=23%  Similarity=0.301  Sum_probs=73.7

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++..+..  .    .+++...+.               .....+.+..  .         
T Consensus         9 ~l~V~Dle~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~---------------~~~~~~~l~~--~---------   56 (303)
T TIGR03211         9 ELRVLDLEESLKHYTDVLGLEETGRDG--Q----RVYLKAWDE---------------WDHYSVILTE--A---------   56 (303)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeecC--c----eEEEEeccc---------------cccceEeecc--C---------
Confidence            378999999999999999999876532  1    122322110               0022333321  0         


Q ss_pred             CCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCC--CcccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~--~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                            ...++.|++|.|+   |+++++++|+++|+++...+.  ....++.+||+|||||.|||.+...
T Consensus        57 ------~~~g~~hiaf~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~  120 (303)
T TIGR03211        57 ------DTAGLDHMAFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKE  120 (303)
T ss_pred             ------CCCceeEEEEEeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccc
Confidence                  0126789999998   799999999999999876553  1122457899999999999998543

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.52  E-value=3.1e-13  Score=100.88  Aligned_cols=104  Identities=27%  Similarity=0.392  Sum_probs=72.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  .    .+++......               ....+.+..  .+         
T Consensus        10 l~v~Dl~~s~~FY~~vLGl~~~~~~~--~----~~~~~~~~~~---------------~~~~l~l~~--~~---------   57 (294)
T TIGR02295        10 LRVTDLDKSREFYVDLLGFRETESDK--E----YIYLRGIEEF---------------QHHSLVLTK--AP---------   57 (294)
T ss_pred             EEeCCHHHHHHHHHHccCCEEEEecC--C----eEEEeccCcC---------------CceEEEeee--CC---------
Confidence            78999999999999999999876532  1    1233211100               012333321  10         


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                            ..+..|++|.|+   |+++++++|+++|+++...+..+. .+.+||+|||||.|||+...
T Consensus        58 ------~~~~~hiaf~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~-~~~~~~~DPdG~~iEl~~~~  116 (294)
T TIGR02295        58 ------SAALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVRDGGQ-PEALRVEDPFGYPIEFYFEM  116 (294)
T ss_pred             ------CcCccEEEEEeCCHHHHHHHHHHHHhcCCcEEeecCCCC-ceEEEEECCCCCEEEEEEch
Confidence                  125789999997   789999999999999887654332 36789999999999999744

The enzyme from Bacillus brevis contains manganese.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.49  E-value=1.3e-13  Score=88.62  Aligned_cols=93  Identities=27%  Similarity=0.364  Sum_probs=68.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++||++.......+.......++..++                 +...|||+.+.....     ..
T Consensus         5 i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~-----------------~~~~iELi~p~~~~~-----~~   62 (109)
T PF13669_consen    5 IVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGD-----------------GPVQIELIQPLDGDS-----PL   62 (109)
T ss_dssp             EEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETT-----------------ETEEEEEEEESSTTC-----HH
T ss_pred             EEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCC-----------------CcEEEEEEEeCCCCc-----cc
Confidence            68999999999999999999887665555556555655432                 126899987644331     01


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  119 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  119 (153)
                      ..   ...|++||||.|+|++++.++|+++|+++...+
T Consensus        63 ~~---~~~gi~Hia~~v~D~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   63 DR---GGGGIHHIAFEVDDLDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HH---TSSEEEEEEEEESHHHHHHHHHHHTTECEEECE
T ss_pred             cc---CCCCEEEEEEEeCCHHHHHHHHHHCCCEEcccC
Confidence            10   234899999999999999999999999988654

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.49  E-value=6.2e-13  Score=99.06  Aligned_cols=105  Identities=20%  Similarity=0.297  Sum_probs=72.1

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||+...+..  + +  ..|+..+..                 +..+.+..  .+.       
T Consensus         8 ~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~-~--~~~~~~~~~-----------------~~~~~l~~--~~~-------   56 (286)
T TIGR03213         8 GIGVSDVDAWREFATEVLGMMVASEGE--N-D--ALYLRLDSR-----------------AHRIAVHP--GES-------   56 (286)
T ss_pred             EEEeCCHHHHHHHHHhccCcccccCCC--C-c--eEEEEcCCC-----------------ceEEEEEE--CCc-------
Confidence            378999999999999999998765321  1 1  123333210                 23343321  110       


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCC----CcccceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD----GGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~----~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                              .+..|++|.|++   ++++.++|+++|+++...+.    .....+.+||.|||||.|||+...
T Consensus        57 --------~~~~~~~f~V~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~  119 (286)
T TIGR03213        57 --------DDLAYAGWEVADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGA  119 (286)
T ss_pred             --------CCeeeEeeeeCCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcc
Confidence                    146799999998   89999999999999886542    111235689999999999999743

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.39  E-value=3e-12  Score=90.73  Aligned_cols=114  Identities=39%  Similarity=0.676  Sum_probs=89.4

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCC-----------ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   69 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   69 (153)
                      ++.|-|..++++||+++|||++.+..+.++           ..|+-.|++++.     ++.          ++++||..+
T Consensus        22 VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGp-----Eds----------hFViELTYN   86 (299)
T KOG2943|consen   22 VFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGP-----EDS----------HFVIELTYN   86 (299)
T ss_pred             eEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCC-----Ccc----------cEEEEEEec
Confidence            357899999999999999999999877766           567667777753     332          789999988


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCcc
Q 031774           70 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  146 (153)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  146 (153)
                      .+-..      |..|+    ++.||.+.++|+-..++++...|.       .+.....+++.||||+.++|+++...
T Consensus        87 YgV~~------YelGn----dfg~i~I~s~dv~~~ve~v~~p~~-------~~~g~~~~~v~dPdGykF~l~~~~p~  146 (299)
T KOG2943|consen   87 YGVSK------YELGN----DFGGITIASDDVFSKVEKVNAPGG-------KGSGCGIAFVKDPDGYKFYLIDRGPQ  146 (299)
T ss_pred             cCccc------eeccC----CcccEEEeHHHHHHHHHHhcCcCC-------cccceEEEEEECCCCcEEEEeccCCC
Confidence            76553      77777    899999999999988888887665       12222357899999999999985543

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.36  E-value=5.3e-11  Score=78.57  Aligned_cols=109  Identities=12%  Similarity=0.056  Sum_probs=69.8

Q ss_pred             eee-cChhhhHHHHhhhcCCEEeEEeecCCc----------cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 031774            2 FRI-KDPKVSLDFYSRVLGMSLLKRLDFPEM----------KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   70 (153)
Q Consensus         2 l~v-~d~~~a~~FY~~~lG~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   70 (153)
                      |.+ .|.++|++||+++||+++......++.          .+..+.+..                   ++..|.+....
T Consensus         5 L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i-------------------~g~~l~~~d~~   65 (128)
T cd06588           5 LWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTI-------------------GGQRLMASDGG   65 (128)
T ss_pred             EeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEE-------------------CCEEEEEEcCC
Confidence            567 899999999999999999987643211          111222222                   12344443221


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEe
Q 031774           71 GTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  141 (153)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  141 (153)
                       +...     .     .+.+..++++.++|   +++++++|.+.| ++..++...+++ +..+++||+|+.|+|.
T Consensus        66 -~~~~-----~-----~~~~~~~l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          66 -PGFP-----F-----TFGNGISLSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             -CCCC-----C-----CCCCCEEEEEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEeC
Confidence             1100     0     11234689999986   778889977665 888777655443 4788999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.35  E-value=1.5e-11  Score=77.83  Aligned_cols=121  Identities=21%  Similarity=0.325  Sum_probs=75.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||.++||++.-++.+.   -....|.+.                    +..+++........+.   +.
T Consensus        10 ~pV~Dl~~tr~FYgevlG~~~GRstd~---wvdfDfyGH--------------------Q~v~Hl~~q~~~~~~g---~V   63 (138)
T COG3565          10 IPVNDLDETRRFYGEVLGCKEGRSTDT---WVDFDFYGH--------------------QVVAHLTPQPDSQGSG---KV   63 (138)
T ss_pred             eeccccHHHHhhhhhhcccccccccce---EEEeeeccc--------------------EEEEEecCCcccccCc---cc
Confidence            679999999999999999998876431   011222221                    2233332111111111   11


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCC---ccc--ceEEEEECCCCCEEEEeccCccccc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GKL--KGVAFIKDPDDYWIEIFDLKTIGKI  149 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~---~~~--~~~~~~~DPdG~~iel~~~~~~~~~  149 (153)
                      . +..-+....-+.+.++|+.++.++|+++|+....+|.-   |..  .+.+|+.||.||-+|+-.-......
T Consensus        64 ~-~~~v~~pHfGvVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~~e~v  135 (138)
T COG3565          64 D-GHGVPPPHFGVVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRDQEQV  135 (138)
T ss_pred             C-CCCCCCccceEEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccchhhh
Confidence            1 11122233456678889999999999999999888732   222  2478899999999999766554443

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.34  E-value=2e-11  Score=88.21  Aligned_cols=111  Identities=17%  Similarity=0.312  Sum_probs=76.0

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++.+..||+++||+++..+...      .+.++.++                  ...|.|.+.......     
T Consensus        15 ~L~vrdL~~~~~FY~~ilGL~v~~~~~~------~v~L~vgg------------------~~LL~L~q~~~a~~~-----   65 (265)
T COG2514          15 TLNVRDLDSMTSFYQEILGLQVLEETDG------SVTLGVGG------------------TPLLTLEQFPDARRP-----   65 (265)
T ss_pred             EEEeccHHHHHHHHHHhhCCeeeeccCc------eEEEeeCC------------------EEEEEEEeCCCCCCC-----
Confidence            3789999999999999999999987532      12233221                  245666543222110     


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      .    ....|+.|++|-+++   +..++.++.+.|+.+...-. ....-.+||.||+||-|||.-.+.
T Consensus        66 ~----~~~aGLyH~AfLlP~r~~L~~~l~hl~~~~~~l~Ga~D-H~vSEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          66 P----PRAAGLYHTAFLLPTREDLARVLNHLAEEGIPLVGASD-HLVSEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             C----ccccceeeeeeecCCHHHHHHHHHHHHhcCCcccccCc-chhheeeeecCCCCCeEEEEecCC
Confidence            0    112489999999985   77888999999988763322 222236999999999999998643

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.33  E-value=1.7e-10  Score=76.48  Aligned_cols=116  Identities=20%  Similarity=0.209  Sum_probs=79.9

Q ss_pred             eeec-ChhhhHHHHhhhcCCEEeEEeecCCc----------cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 031774            2 FRIK-DPKVSLDFYSRVLGMSLLKRLDFPEM----------KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   70 (153)
Q Consensus         2 l~v~-d~~~a~~FY~~~lG~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   70 (153)
                      |..+ |.++|++||+++||.++......++.          ....+-+..+                   +..|-+....
T Consensus         6 l~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~-------------------g~~im~sd~~   66 (136)
T COG2764           6 LFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG-------------------GSTIMLSDAF   66 (136)
T ss_pred             EEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC-------------------CEEEEEecCC
Confidence            5678 99999999999999999998877662          2222222221                   2333332211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEeccCc
Q 031774           71 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~  145 (153)
                      ....      ...++   +.-..|.+.++|++++++++.+.|+++..++....++ +...++||.|+.|-|.....
T Consensus        67 ~~~~------~~~~~---~~s~~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          67 PDMG------ATEGG---GTSLSLDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             CccC------cccCC---CeeEEEEEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecCcc
Confidence            1110      11111   1235777788899999999999999999999776664 56779999999999987653

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.25  E-value=3.5e-11  Score=84.83  Aligned_cols=100  Identities=21%  Similarity=0.352  Sum_probs=65.2

Q ss_pred             eeec--ChhhhHHHHhhhcCCEEeEEeecCC--ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 031774            2 FRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   77 (153)
Q Consensus         2 l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   77 (153)
                      +.|+  |++++++||+++|||+.......++  .+.....+..+.                 +...|+|.....+.....
T Consensus         9 i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~-----------------g~i~l~L~~~~~~~~~s~   71 (191)
T cd07250           9 GNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD-----------------GKIRIPLNEPASGKRKSQ   71 (191)
T ss_pred             eecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC-----------------CcEEEEEecCCCCCCccH
Confidence            5788  9999999999999999988765432  223333343221                 245677754322101100


Q ss_pred             CCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC
Q 031774           78 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  119 (153)
Q Consensus        78 ~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  119 (153)
                      ...+.. ...+.|++||||.|+|+++++++|+++|++++..|
T Consensus        72 ~~~fl~-~~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P  112 (191)
T cd07250          72 IQEFLE-YYGGAGVQHIALATDDIFATVAALRARGVEFLPIP  112 (191)
T ss_pred             HHHHHH-HhCCCceeEEEEECCCHHHHHHHHHHcCCeeccCc
Confidence            001100 01124899999999999999999999999998776

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.24  E-value=2e-11  Score=86.62  Aligned_cols=116  Identities=28%  Similarity=0.465  Sum_probs=83.1

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      ||.|.|+++|++||.++||+++.....    ....+.|+++..                 +..|||....+...      
T Consensus       154 ~l~VgdL~ks~kyw~~~lgM~ilekee----k~t~~~mgYgd~-----------------q~~LElt~~~~~id------  206 (299)
T KOG2943|consen  154 MLNVGDLQKSIKYWEKLLGMKILEKEE----KYTRARMGYGDE-----------------QCVLELTYNYDVID------  206 (299)
T ss_pred             EEEehhHHHHHHHHHHHhCcchhhhhh----hhhhhhhccCCc-----------------ceEEEEEeccCccc------
Confidence            588999999999999999999997522    245567777653                 57899987655432      


Q ss_pred             CCCCCCCCCCcceEEEEe--CCHHHHHHHHHhcCCeEeecC----CCcccce-EEEEECCCCCEEEEeccCccccc
Q 031774           81 YHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKP----DGGKLKG-VAFIKDPDDYWIEIFDLKTIGKI  149 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v--~di~~~~~~l~~~G~~~~~~~----~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~  149 (153)
                      +.      .|+..++|.+  +++..+.+.++..+.+++.+.    .++.... .+-+.||||+.|.|+....++++
T Consensus       207 ~~------kg~griafaip~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~l  276 (299)
T KOG2943|consen  207 RA------KGFGRIAFAIPTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKL  276 (299)
T ss_pred             cc------ccceeEEEeccccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHH
Confidence            21      2455666665  478888899999977776544    3343332 55679999999999987766553

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.24  E-value=7.8e-11  Score=75.62  Aligned_cols=116  Identities=16%  Similarity=0.171  Sum_probs=70.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEecc-CCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW-GTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~-~~~~~~~~~~   80 (153)
                      |.|+|++++.+||. .|||+......... ...+  +-.++                  -..+.|.... .....     
T Consensus         9 LPVkDL~~S~~Fy~-alGfk~Npq~sde~-a~~m--i~~~n------------------i~vMLL~~~~fq~F~~-----   61 (133)
T COG3607           9 LPVKDLEASKAFYT-ALGFKFNPQFSDED-AACM--IISDN------------------IFVMLLEEARFQTFTK-----   61 (133)
T ss_pred             cchhhHHHHHHHHH-HhCcccCCCccccc-ceeE--EEecc------------------EEEEEeccHHhhhhcc-----
Confidence            67999999999995 69999987665322 1111  11111                  1222222111 11110     


Q ss_pred             CCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      ..........-..+|+.+.   +++++++++.++|+++..++.+...-+..-|.|||||.||+.=..
T Consensus        62 ~~i~dt~~s~evli~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m~  128 (133)
T COG3607          62 RQIADTTKSREVLISLSAGSREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWMD  128 (133)
T ss_pred             cccccccCCceEEEEeccCcHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEeC
Confidence            0111112235568888886   489999999999999988775432222245799999999997543

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.06  E-value=9.5e-10  Score=71.28  Aligned_cols=125  Identities=25%  Similarity=0.329  Sum_probs=68.9

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCcc---EEEEEeeccCCCCCCCCcccceeeecCCCcEEEE-EeccCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK---FSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL-THNWGTESDP   76 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel-~~~~~~~~~~   76 (153)
                      .|.|+|+++|++||+++||++...........   ....+.......   ...          ...... ..........
T Consensus         7 ~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------~~~~~~~~~~~~~~~~~   73 (138)
T COG0346           7 TLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGP---GEL----------LAFFGFEGRAGTGFVGD   73 (138)
T ss_pred             EEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCc---ccc----------eeecccccccccccccc
Confidence            37899999999999999999999876532211   111122111000   000          000000 0000000000


Q ss_pred             CCCCCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEec
Q 031774           77 DFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        77 ~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  142 (153)
                      .......+   ..+..|+++.+++   +......+...|..+..... ...+..+|++||||+.|||.+
T Consensus        74 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          74 VALGVPGG---DLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             eEEeecCc---hhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcceEEEEECCCCcEEEeeC
Confidence            00000000   0246799999998   67777777788888765443 322337999999999999974

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.98  E-value=2.7e-09  Score=81.90  Aligned_cols=100  Identities=16%  Similarity=0.319  Sum_probs=62.6

Q ss_pred             eeec--ChhhhHHHHhhhcCCEEeEEeecCC--ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 031774            2 FRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   77 (153)
Q Consensus         2 l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   77 (153)
                      |.|+  |++++++||+++|||+.........  ..+....+...                 .+...|+|..+........
T Consensus       164 i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~-----------------~g~~~i~L~ep~~~~~~s~  226 (353)
T TIGR01263       164 GNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASP-----------------DGKVKIPLNEPASGKDKSQ  226 (353)
T ss_pred             cccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECC-----------------CCcEEEEEeccCCCCCCCH
Confidence            5677  9999999999999999987655322  11111112111                 1245677754311111110


Q ss_pred             CCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC
Q 031774           78 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  119 (153)
Q Consensus        78 ~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  119 (153)
                      ...+... ....|++||||.|+|+++++++|+++|++++..|
T Consensus       227 i~~fl~~-~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       227 IEEFLEF-YNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             HHHHHHH-cCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            0101000 1124899999999999999999999999999876

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.98  E-value=1.7e-08  Score=77.53  Aligned_cols=95  Identities=22%  Similarity=0.266  Sum_probs=63.1

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||.+.|||+............. ..+..                   +...|++.....+.+ + ...+
T Consensus         8 ~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~~~-~~~~~-------------------G~~~l~L~~~~~~~s-~-~~~~   65 (353)
T TIGR01263         8 FYVGDAKQAAYYYFTRFGFEKVAKETGHREKAS-HVLRQ-------------------GQINFVLTAPYSSDS-P-AADF   65 (353)
T ss_pred             EEeCCHHHHHHHHHHhcCCcEEEEeecCCceeE-EEEEe-------------------CCEEEEEecCCCCCc-h-HHHH
Confidence            689999999999999999999876322222211 11221                   246677754322211 0 1011


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  120 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~  120 (153)
                      ..  ..+.+..|+||.|+|++++++++.++|+.+..+|.
T Consensus        66 ~~--~hg~gv~~iaf~V~Dv~~a~~~l~~~Ga~~v~~p~  102 (353)
T TIGR01263        66 AA--KHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPV  102 (353)
T ss_pred             HH--hCCCceEEEEEEECCHHHHHHHHHHCCCEeccCCc
Confidence            11  11348899999999999999999999999987764

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.82  E-value=1.3e-08  Score=78.71  Aligned_cols=100  Identities=14%  Similarity=0.282  Sum_probs=63.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCc-----cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC-CCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-----KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT-ESD   75 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~-~~~   75 (153)
                      +.|+++++++.||+++|||+.......++.     ++....+..++                 +...|+|..+... ...
T Consensus       186 iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~-----------------g~v~ipLnEP~~~~~~~  248 (398)
T PLN02875        186 GNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN-----------------EMVLLPLNEPTFGTKRK  248 (398)
T ss_pred             echhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC-----------------CcEEEEeccCCCCCCCc
Confidence            567899999999999999999876543221     12222333211                 2356777543211 111


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhc----CCeEeecC
Q 031774           76 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL----GVEFAKKP  119 (153)
Q Consensus        76 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~----G~~~~~~~  119 (153)
                      .....+...+ ...|++||||.|+||.+++++|+++    |++++..|
T Consensus       249 SqI~eFL~~~-~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        249 SQIQTYLEHN-EGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             ChHHHHHHhc-CCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            1111122111 1249999999999999999999999    99999854

>PRK10148 hypothetical protein; Provisional

Probab=98.71  E-value=2e-06  Score=58.15  Aligned_cols=52  Identities=10%  Similarity=-0.114  Sum_probs=40.9

Q ss_pred             cceEEEEeCCHHH---HHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEecc
Q 031774           91 FGHIGITVDDVYK---ACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        91 ~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  143 (153)
                      ..+|++.++|.++   ++++| +.|.++..++....++ ++..++||.|+.|.|...
T Consensus        86 ~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         86 GFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             eEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence            3588888888766   55555 6899999988776664 467799999999999775

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.70  E-value=7.9e-08  Score=72.51  Aligned_cols=51  Identities=20%  Similarity=0.229  Sum_probs=39.2

Q ss_pred             CcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEec
Q 031774           90 GFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        90 g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  142 (153)
                      .-..+|+.+++   ++++++++.++|++...++.+...++  -|.|||||.||++=
T Consensus       300 ~evLl~Ls~~Sre~VD~lv~~A~aaGG~~~~~~~D~Gf~r--sf~D~DGH~WEi~~  353 (357)
T PRK01037        300 GTTTLSLELECEHDFVRFLRRWEMLGGELGEQADGHFPLR--LVFDLDGHIWVVSC  353 (357)
T ss_pred             ceEEEEeccCCHHHHHHHHHHHHHcCCCCCCCcccccCcc--eeECCCCCEEEEEE
Confidence            34688999984   89999999999997766664433232  36899999999973

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.51  E-value=4.2e-07  Score=68.24  Aligned_cols=96  Identities=19%  Similarity=0.331  Sum_probs=61.2

Q ss_pred             ecChhhhHHHHhhhcCCEEeEEeecCCcc---EEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            4 IKDPKVSLDFYSRVLGMSLLKRLDFPEMK---FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         4 v~d~~~a~~FY~~~lG~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      ...++.++.||+++|||+.....+.++..   .+.++...                    ...+.|..+...+.+.....
T Consensus       177 ~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp--------------------~G~vrlplN~s~~~~sqi~e  236 (363)
T COG3185         177 AGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSP--------------------CGKVRLPLNESADDKSQIGE  236 (363)
T ss_pred             hhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecC--------------------CCcEEeecccCCCchhHHHH
Confidence            45789999999999999999887765432   11122211                    22344433322222110001


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCC
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  120 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~  120 (153)
                      +.. ...+.|++||+|.++||-++.++|++.|++++..|.
T Consensus       237 fl~-~y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         237 FLR-EYRGEGIQHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             HHH-HhCCCcceEEEecccHHHHHHHHHHHcCCccCCCch
Confidence            110 112349999999999999999999999999998773

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.33  E-value=1.8e-05  Score=50.87  Aligned_cols=112  Identities=19%  Similarity=0.315  Sum_probs=57.3

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|-+..++||++.|||++..+..      .++.++....                 ...+.|-..  |...  .+.
T Consensus         5 vlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~-----------------~erlvlEES--P~~r--tr~   57 (125)
T PF14506_consen    5 VLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQK-----------------EERLVLEES--PSMR--TRA   57 (125)
T ss_dssp             EEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT-------------------EEEEEEE----TTT---B-
T ss_pred             eEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCC-----------------ceEEEEecC--Cccc--ccc
Confidence            478999999999999999999998743      2345554211                 233433221  2110  011


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      +    ..+..+.++.+.+++..++ +.|.++|.++.. +..|..++.+-..+|+|+.|.|.....
T Consensus        58 V----~G~KKl~~ivIkv~~~~EI-e~LLar~~~~~~-l~kg~~gyAfe~vSPEgd~~llhaEdd  116 (125)
T PF14506_consen   58 V----EGPKKLNRIVIKVPNPKEI-EALLARGAQYDR-LYKGKNGYAFEAVSPEGDRFLLHAEDD  116 (125)
T ss_dssp             -----SSS-SEEEEEEEESSHHHH-HHHHHC-S--SE-EEE-SSSEEEEEE-TT--EEEEE--S-
T ss_pred             c----cCcceeeEEEEEcCCHHHH-HHHHhcccccce-eEEcCCceEEEEECCCCCEEEEEEcCC
Confidence            1    1234688999999875443 344455544322 222333455557899999999987543

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.25  E-value=7.3e-06  Score=59.71  Aligned_cols=91  Identities=22%  Similarity=0.364  Sum_probs=56.3

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|.|+++|.+||+++|||+...+.  +.    ..|+..++-                 +++|.. +.|.....      
T Consensus       174 L~v~~l~eA~~fY~~~LG~~~~~~~--~~----A~F~a~G~Y-----------------HHHia~-N~W~s~~~------  223 (265)
T COG2514         174 LKVADLEEAEQFYEDVLGLEVTARG--PS----ALFLASGDY-----------------HHHLAA-NTWNSRGA------  223 (265)
T ss_pred             EEeCCHHHHHHHHHHhcCCeeeecC--Cc----ceEEecCCc-----------------ceeEEE-eccccCCC------
Confidence            7899999999999999999999872  22    245555431                 233333 34444321      


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEe
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  141 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  141 (153)
                      ..++....|+..+.+.+++-..+.....                   ...||+|+.|.++
T Consensus       224 ~~~~~~~~GLa~~~i~~~~~~~l~~~~~-------------------~~~Dp~G~~i~~~  264 (265)
T COG2514         224 RPRNANASGLAWLEIHTPDPEKLDATGT-------------------RLTDPWGIVIRVV  264 (265)
T ss_pred             CCCCCCCCCcceEEEEcCCccccccccc-------------------ceecCCCceEEEe
Confidence            1112233588899999887333211110                   0179999999875

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.12  E-value=1.3e-05  Score=55.57  Aligned_cols=95  Identities=14%  Similarity=0.239  Sum_probs=48.5

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC-C
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF-K   79 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~-~   79 (153)
                      ++.|+|+++++++|++.|||.+......+..+..-..+..+                   ..+||+.........+.. +
T Consensus         5 v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~-------------------~~YlEli~i~~~~~~~~~~~   65 (175)
T PF13468_consen    5 VIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG-------------------DGYLELIAIDPEAPAPDRGR   65 (175)
T ss_dssp             EEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S-------------------SSEEEEEEES-HHHSTGGGT
T ss_pred             EEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC-------------------CceEEEEEeCCccccccccc
Confidence            47899999999999889999999776655433322222222                   349999874222111100 0


Q ss_pred             CCCCC-CCCCCCcceEEEEeCCHHHHHHHHHhcCCe
Q 031774           80 GYHNG-NSEPRGFGHIGITVDDVYKACERFERLGVE  114 (153)
Q Consensus        80 ~~~~~-~~~~~g~~hl~f~v~di~~~~~~l~~~G~~  114 (153)
                      .+... .....|+.++|+.++|+++..++|++.|+.
T Consensus        66 ~~~~~~~~~~~g~~~~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   66 WFGLDRLAGGEGLYGWALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             -TTTHHHHT--EEEEEEEE-S-HHHHHHHHHTTT-E
T ss_pred             ceechhhcCCCCeEEEEEecCCHHHHHHHHHhcCCC
Confidence            01000 012358999999999999999999999986

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=97.60  E-value=0.0014  Score=51.12  Aligned_cols=56  Identities=16%  Similarity=0.091  Sum_probs=42.5

Q ss_pred             CCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCc-c---cc--eEEEEECCCCCEEEEeccC
Q 031774           89 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-K---LK--GVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~-~---~~--~~~~~~DPdG~~iel~~~~  144 (153)
                      .+..-++|+|+|.+++++++.++|+.+..+|..- .   .+  ...-+.-+.|..+-|+++.
T Consensus        91 ~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~  152 (398)
T PLN02875         91 LAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYK  152 (398)
T ss_pred             CeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccC
Confidence            4788999999999999999999999998776431 1   11  2334677778888887754

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.38  E-value=0.013  Score=37.96  Aligned_cols=41  Identities=15%  Similarity=0.173  Sum_probs=29.3

Q ss_pred             ceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEe
Q 031774           92 GHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  141 (153)
Q Consensus        92 ~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  141 (153)
                      ..|++.++|   ++.+.++|.+.|-     +    ...+..+.|..|..|.|+
T Consensus        73 ~sl~i~~~~~ee~~~~f~~Ls~gG~-----~----~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   73 ISLCIECDDEEEIDRIFDKLSEGGQ-----W----FSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHTTTE-----T----CCEEEEEE-TTS-EEEEE
T ss_pred             EEEEEEcCCHHHHHHHHHHHHcCCC-----c----cceeEEEEeCCCCEEEeC
Confidence            688899987   5667788877775     2    124567999999999885

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.21  E-value=0.001  Score=49.78  Aligned_cols=97  Identities=11%  Similarity=0.187  Sum_probs=57.1

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCcc--EEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      +.|.|...++.||+..|||+.........+.  +.-.-++.                   +....-+.....+..+ .+-
T Consensus        23 F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~-------------------g~~vFv~~s~~~p~~~-~~G   82 (381)
T KOG0638|consen   23 FWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQ-------------------GKIVFVFNSAYNPDNS-EYG   82 (381)
T ss_pred             EEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhc-------------------CCEEEEEecCCCCCch-hhh
Confidence            4688999999999999999998754221111  10000110                   1122222222222110 000


Q ss_pred             CCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCC
Q 031774           80 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  120 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~  120 (153)
                      ......  .-|.--+||+|+|++++.+.+.++|+++..+|.
T Consensus        83 ~~l~~H--gdgvkdvafeVeD~da~~~~~va~Ga~v~~~p~  121 (381)
T KOG0638|consen   83 DHLVKH--GDGVKDVAFEVEDADAIFQEAVANGAKVVRPPW  121 (381)
T ss_pred             hhhhhc--ccchhceEEEecchHHHHHHHHHcCCcccCCcc
Confidence            011111  225778999999999999999999999998873

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.20  E-value=0.00077  Score=45.07  Aligned_cols=113  Identities=21%  Similarity=0.272  Sum_probs=63.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC-CCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP-DFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~-~~~~   80 (153)
                      +.|.+.+++..|+ +.|||+...+...  ....+ |-.                    +...+-|..  .+.... .+. 
T Consensus        15 Fa~~~~~~l~~~~-~~lGF~~~a~hrs--k~v~l-~rQ--------------------G~I~~vln~--ep~s~a~~~~-   67 (139)
T PF14696_consen   15 FAVPDAQALAQLF-TALGFQPVARHRS--KDVTL-YRQ--------------------GDINFVLNS--EPDSFAAEFA-   67 (139)
T ss_dssp             EE-SSTTSCHHHH-CCCCEEEECCECC--CSEEE-EEE--------------------TTEEEEEEE--ESTSCHHHHH-
T ss_pred             EecCCHHHHHHHH-HHhCcceEEecCC--cceEE-EEe--------------------CCEEEEEeC--CCcchHHHHH-
Confidence            4577877777777 5799999987532  12222 211                    134444432  221100 000 


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      ...|    .+..-++|.|+|.+++++++.+.|.+....|.....-..--++-+.|.++-|+++..
T Consensus        68 ~~HG----~sv~aiafrV~Da~~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVdr~~  128 (139)
T PF14696_consen   68 AQHG----PSVCAIAFRVDDAAAAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVDRYG  128 (139)
T ss_dssp             HHHS----SEEEEEEEEES-HHHHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE--S
T ss_pred             HhcC----CEEEEEEEEeCCHHHHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEecCC
Confidence            0112    378899999999999999999999998876632111234557889999999998743

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=96.82  E-value=0.003  Score=40.11  Aligned_cols=55  Identities=27%  Similarity=0.253  Sum_probs=39.2

Q ss_pred             ceEEEEeCCHHHHHHHHHh-cCCeEeecCCCccc-ceEEEEECCCC-CEEEEeccCcc
Q 031774           92 GHIGITVDDVYKACERFER-LGVEFAKKPDGGKL-KGVAFIKDPDD-YWIEIFDLKTI  146 (153)
Q Consensus        92 ~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~-~~~~~~~DPdG-~~iel~~~~~~  146 (153)
                      +|++|.|+|++++.+.+.+ .|+........... -+..++..++| ..|||+++...
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~   58 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDG   58 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESST
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCC
Confidence            4999999999999999998 89876543211111 23456677877 78999997653

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=96.74  E-value=0.00082  Score=50.30  Aligned_cols=125  Identities=18%  Similarity=0.333  Sum_probs=74.2

Q ss_pred             ChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC------CCCC
Q 031774            6 DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD------PDFK   79 (153)
Q Consensus         6 d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~------~~~~   79 (153)
                      .++.+++||.+.|||..-+..+.+.-+.  .|.+..            .....+....|.+..+.+.+.+      +.+-
T Consensus       190 em~sa~~wy~~~l~Fhrfwsvdd~~v~t--e~SaLr------------s~vlan~~esi~mpinEp~~G~k~ksQIqeyv  255 (381)
T KOG0638|consen  190 EMESALRWYEKCLGFHRFWSVDDSQVHT--EYSALR------------SIVLANYEESIKMPINEPAPGKKKKSQIQEYV  255 (381)
T ss_pred             cchHHHHHHHHhhcccccccCCcchhhh--HHHHHH------------HHHHhcCCccEEEeccCCCCCCccHHHHHHHH
Confidence            5678999999999999888765332111  111110            0001112333444332221111      1111


Q ss_pred             CCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCC---------c---------cc----ceEEEEECCCCCE
Q 031774           80 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---------G---------KL----KGVAFIKDPDDYW  137 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~---------~---------~~----~~~~~~~DPdG~~  137 (153)
                      .+..    ..|++|+++.++||-++.+.++++|++++.+|..         .         ..    -.+..-.|-.|++
T Consensus       256 ~y~g----G~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De~gyL  331 (381)
T KOG0638|consen  256 EYHG----GAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDENGYL  331 (381)
T ss_pred             HhcC----CCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcEE
Confidence            2322    2599999999999999999999999999988721         0         00    1244446888999


Q ss_pred             EEEeccCcccc
Q 031774          138 IEIFDLKTIGK  148 (153)
Q Consensus       138 iel~~~~~~~~  148 (153)
                      +.|+...-.+.
T Consensus       332 LQIFTKplqdr  342 (381)
T KOG0638|consen  332 LQIFTKPLQDR  342 (381)
T ss_pred             eeeeccccCCC
Confidence            99988654433

>PF15067 FAM124: FAM124 family

Probab=96.58  E-value=0.039  Score=39.80  Aligned_cols=99  Identities=15%  Similarity=0.159  Sum_probs=54.5

Q ss_pred             eeec--ChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            2 FRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         2 l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      |.|+  |.+.+++||+-+|+-+....-+  +  |. .|.-+...                 +..|.+....-+..   ..
T Consensus       134 ly~~~~N~~d~vr~Yelil~~~~~~~k~--~--FC-~F~lys~~-----------------~~~iQlsLK~lp~~---~~  188 (236)
T PF15067_consen  134 LYCSFDNYEDMVRFYELILQREPTQQKE--D--FC-FFTLYSQP-----------------GLDIQLSLKQLPPG---MS  188 (236)
T ss_pred             EEecCCCHHHHHHHHHHHhccCcceeeC--C--cE-EEEEecCC-----------------CeEEEEEeccCCCC---CC
Confidence            5677  9999999999999988765432  2  32 22222111                 34444443211111   11


Q ss_pred             CCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC-CCcccceEEEEECCCCCEEEE
Q 031774           80 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DGGKLKGVAFIKDPDDYWIEI  140 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~-~~~~~~~~~~~~DPdG~~iel  140 (153)
                      +.      +.-..-+.|.|.|+-+++--        +..| .+-..++ +-..|||||.|-+
T Consensus       189 p~------p~esavLqF~V~~igqLvpL--------LPnpc~PIS~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  189 PE------PTESAVLQFRVEDIGQLVPL--------LPNPCSPISETR-WQTEDYDGNKILL  235 (236)
T ss_pred             cc------cccceEEEEEecchhhhccc--------CCCCcccccCCc-ceeeCCCCCEecc
Confidence            11      12335899999999887432        2222 1111122 4579999999854

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=95.77  E-value=0.047  Score=34.35  Aligned_cols=43  Identities=16%  Similarity=0.228  Sum_probs=25.6

Q ss_pred             CcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEE
Q 031774           90 GFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWI  138 (153)
Q Consensus        90 g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~i  138 (153)
                      .+..+-|.|+   |+.++.+++.+.++ ++..-     ..++.+.||.+..|
T Consensus        53 DLe~Lkf~V~~~~Dl~~L~~~le~~~~-fidKk-----~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   53 DLEMLKFQVPKDFDLAALKSHLEEQEF-FIDKK-----EKFLVTSDPSQIEL   98 (101)
T ss_dssp             SEEEEEEEES-S--HHHHHHHTTTS-E-E--TT------SEEEEE-TTS-EE
T ss_pred             eeEEEEEEecCcccHHHHHHHhcccce-EecCC-----ceEEEEECCcceEE
Confidence            5667888888   68889999988433 11111     23567899988654

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.12  E-value=0.17  Score=33.24  Aligned_cols=54  Identities=26%  Similarity=0.478  Sum_probs=38.4

Q ss_pred             CcceEEEEeCCHHHHHHHHHhcCCeEeecCC-Cc-----------ccceEEEEECCCC-CEEEEecc
Q 031774           90 GFGHIGITVDDVYKACERFERLGVEFAKKPD-GG-----------KLKGVAFIKDPDD-YWIEIFDL  143 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~-~~-----------~~~~~~~~~DPdG-~~iel~~~  143 (153)
                      ++.|+++.|+|++++.+-..+.|..+..... .+           ......++..|+| ..|||++.
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~   69 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKF   69 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEe
Confidence            6789999999999999999999988764331 11           1112455666665 57899874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=94.59  E-value=0.28  Score=33.38  Aligned_cols=56  Identities=34%  Similarity=0.527  Sum_probs=39.9

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecC-----C---Cc---------cc--ceEEEEECCCCCEEEEeccC
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKP-----D---GG---------KL--KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~-----~---~~---------~~--~~~~~~~DPdG~~iel~~~~  144 (153)
                      +++.|+++.|.|++++.+-.++ .|.++..++     .   .+         ..  -...++..++|..||+++..
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            4789999999999999999976 798775321     0   00         11  12456666778889999965

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.95  E-value=0.54  Score=29.57  Aligned_cols=55  Identities=20%  Similarity=0.236  Sum_probs=37.4

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcc-cceEEEEECCCCCEEEEeccC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  144 (153)
                      ++.|+++.|+|++++.+-.++ .|..+........ ....+.+..+++..++++...
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~   59 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFP   59 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcC
Confidence            678999999999999999974 8998875432111 111233445667788887643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=93.63  E-value=0.1  Score=35.95  Aligned_cols=51  Identities=27%  Similarity=0.507  Sum_probs=28.2

Q ss_pred             cceEEEEeCCHHHHHHHH-HhcCCeEeecCCC---cccceEEEEECCCCCEEEEeccC
Q 031774           91 FGHIGITVDDVYKACERF-ERLGVEFAKKPDG---GKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        91 ~~hl~f~v~di~~~~~~l-~~~G~~~~~~~~~---~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      +.|+.+.|+|++++.+++ ++.|+.+......   |.....++|  +++ .|||+...
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f--~~~-YlEli~i~   55 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPF--GDG-YLELIAID   55 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE---SSS-EEEEEEES
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEee--CCc-eEEEEEeC
Confidence            369999999999999999 8889988743321   232335555  667 99999854

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=93.18  E-value=0.76  Score=28.96  Aligned_cols=55  Identities=18%  Similarity=0.315  Sum_probs=37.6

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCC-Ccc-cceEEEEECC---CCCEEEEeccC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGK-LKGVAFIKDP---DDYWIEIFDLK  144 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~-~~~-~~~~~~~~DP---dG~~iel~~~~  144 (153)
                      |+.|+++.|+|++++.+-.++ .|.++..... .+. ....+++.+.   .|..++|++..
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   61 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWP   61 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecC
Confidence            467999999999999999975 6998764431 111 1223455554   57788888754

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.57  E-value=1  Score=28.68  Aligned_cols=52  Identities=19%  Similarity=0.338  Sum_probs=36.5

Q ss_pred             CcceEEEEeCCHHHHHHHHHhc----CCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           90 GFGHIGITVDDVYKACERFERL----GVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~~----G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      |+.|+++.|+|++++.+-..+.    |.++......+    ..|+...++..+++++...
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~~----~~~~~~~~~~~i~l~~~~~   56 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDG----RSWRAGDGGTYLVLQQADG   56 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeeccC----ceEEecCCceEEEEEeccc
Confidence            4689999999999999988776    88877654211    1333334567888887654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=91.78  E-value=1.3  Score=26.68  Aligned_cols=52  Identities=27%  Similarity=0.369  Sum_probs=38.7

Q ss_pred             eEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEeccCcc
Q 031774           93 HIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  146 (153)
Q Consensus        93 hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  146 (153)
                      |+.+.++|++++.+-+.+ .|.+........ .....++.++ +..|+|.+....
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~-~~~~~~~~~~-~~~i~l~~~~~~   53 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNG-GAEFAVLGLG-GTRLELFEGDEP   53 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccC-CEEEEEEecC-CceEEEecCCCC
Confidence            788999999999999997 899887665321 1234556655 789999886654

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.58  E-value=1  Score=27.48  Aligned_cols=53  Identities=17%  Similarity=0.217  Sum_probs=36.3

Q ss_pred             cceEEEEeCCHHHHHHHHH-hcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           91 FGHIGITVDDVYKACERFE-RLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        91 ~~hl~f~v~di~~~~~~l~-~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      +.|+++.|+|++++.+-.. ..|.+....+...  ....++..+++..++|.+...
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~~~~~~~~~~~~i~l~~~~~   54 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL--FPGAWLYAGDGPQLHLIEEDP   54 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC--CCceEEEeCCCcEEEEEecCC
Confidence            3699999999999999886 6788776554321  122455555556788887544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=91.26  E-value=1.7  Score=29.38  Aligned_cols=50  Identities=14%  Similarity=0.194  Sum_probs=35.6

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEEC--CCCCEEEEecc
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKD--PDDYWIEIFDL  143 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~D--PdG~~iel~~~  143 (153)
                      |+.|+++.|+|++++.+-..+ .|.++..... +   ...++..  .++..|++++.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~-~---~~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG-D---RVRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC-C---EEEEEecCCCCCCEEEEEeC
Confidence            568999999999999999975 5988875432 1   1222332  35788998875

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=90.75  E-value=5  Score=31.01  Aligned_cols=46  Identities=20%  Similarity=0.137  Sum_probs=34.8

Q ss_pred             CCcceEEEEeCCHHHHHHHHHhcCCeEeecCC----------CcccceEEEEECCC
Q 031774           89 RGFGHIGITVDDVYKACERFERLGVEFAKKPD----------GGKLKGVAFIKDPD  134 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~----------~~~~~~~~~~~DPd  134 (153)
                      ++..-++|.|+|.+.+++++.+.|.+....+.          .+..+..+|+.|.+
T Consensus        86 ps~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~  141 (363)
T COG3185          86 PSACAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRY  141 (363)
T ss_pred             CchheeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccC
Confidence            36779999999999999999999995554332          12334578888887

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=90.72  E-value=1.4  Score=27.88  Aligned_cols=52  Identities=29%  Similarity=0.325  Sum_probs=36.3

Q ss_pred             ceEEEEeCCHHHHHHHHHh-cCCeEeecCCCc--ccceEEEEECCCCCEEEEeccC
Q 031774           92 GHIGITVDDVYKACERFER-LGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        92 ~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~--~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .|+++.|+|++++.+-..+ .|..........  .....+++.. +|..++|+++.
T Consensus         2 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   56 (128)
T cd07249           2 DHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGL-GNVQIELIEPL   56 (128)
T ss_pred             cEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEc-CCEEEEEEEEC
Confidence            5999999999999999887 788776543221  1112345543 67888888754

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.59  E-value=2.1  Score=26.48  Aligned_cols=52  Identities=19%  Similarity=0.142  Sum_probs=35.0

Q ss_pred             eEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCC--CEEEEeccC
Q 031774           93 HIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDD--YWIEIFDLK  144 (153)
Q Consensus        93 hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG--~~iel~~~~  144 (153)
                      |+++.|.|++++.+-..+ .|.++............+.+.++++  ..+++.+..
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   55 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAPPA   55 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeCCC
Confidence            889999999999999887 8998886542111123455666654  456666543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=90.24  E-value=2.4  Score=28.41  Aligned_cols=56  Identities=20%  Similarity=0.340  Sum_probs=36.1

Q ss_pred             CCCcceEEEEeCCHHHHHHHHHh-cCCeEeecCCC----cccceEEEEE-CCCCCEEEEecc
Q 031774           88 PRGFGHIGITVDDVYKACERFER-LGVEFAKKPDG----GKLKGVAFIK-DPDDYWIEIFDL  143 (153)
Q Consensus        88 ~~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~----~~~~~~~~~~-DPdG~~iel~~~  143 (153)
                      +.++.|+++.|+|++++.+-.++ .|.++......    +......|+. ++.++.+.+.+.
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~   68 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEG   68 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcC
Confidence            35789999999999999999876 79887643211    1111233333 455566776543

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=89.90  E-value=1.1  Score=26.98  Aligned_cols=44  Identities=14%  Similarity=0.071  Sum_probs=31.7

Q ss_pred             CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774          100 DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus       100 di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      ..+++.+++++.|+++..--......+.+...|.||+.+||.=.
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~vD   73 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYVD   73 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEEc
Confidence            68999999999999666432211112457789999999999643

This is family M4 in the peptidase classification.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=88.94  E-value=3.9  Score=25.58  Aligned_cols=52  Identities=19%  Similarity=0.275  Sum_probs=34.8

Q ss_pred             cceEEEEeCCHHHHHHHHHh-cCCeEeec---CCCcccceEEEEECCCCCEEEEeccC
Q 031774           91 FGHIGITVDDVYKACERFER-LGVEFAKK---PDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        91 ~~hl~f~v~di~~~~~~l~~-~G~~~~~~---~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      +.|+++.|+|++++.+-..+ .|.++...   +..+.  ...|+.-.+|..+++++..
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~   57 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGF--ESYFLSFDDGARLELMTRP   57 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCc--eEEEEecCCCcEEEEEcCc
Confidence            46999999999999998877 58876432   21111  2234444467889998643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=88.90  E-value=4.1  Score=26.50  Aligned_cols=52  Identities=17%  Similarity=0.197  Sum_probs=34.6

Q ss_pred             cceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           91 FGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        91 ~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      +.|+.+.|+|++++.+-.++ .|.++....... .....++. ..+..+++.+..
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~-~~~~~~~~-~g~~~l~l~~~~   53 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE-DKASYLLR-QGDINFVLNSPL   53 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC-ceEEEEEE-cCCEEEEEecCC
Confidence            36999999999999999988 899887544221 11223333 345567776543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=88.58  E-value=2.2  Score=26.97  Aligned_cols=53  Identities=19%  Similarity=0.293  Sum_probs=33.8

Q ss_pred             cceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           91 FGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        91 ~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      +.|+++.|+|++++.+..++ .|.++.........+...++..+.+..++|.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   55 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEP   55 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEec
Confidence            57999999999999999974 688775432111111123333344677888764

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>PRK11478 putative lyase; Provisional

Probab=88.15  E-value=3  Score=26.52  Aligned_cols=54  Identities=19%  Similarity=0.186  Sum_probs=33.8

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCC-CcccceEEEEECCCCCEEEEecc
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~-~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      ++.|+++.|+|++++.+-..+ .|.++..... .........+.-.++..+++++.
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   61 (129)
T PRK11478          6 QVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSF   61 (129)
T ss_pred             eecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEe
Confidence            678999999999999999865 7988764321 11101011222234667888763

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=87.66  E-value=5.1  Score=25.69  Aligned_cols=51  Identities=16%  Similarity=0.300  Sum_probs=35.2

Q ss_pred             cceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECC--CCCEEEEeccC
Q 031774           91 FGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDP--DDYWIEIFDLK  144 (153)
Q Consensus        91 ~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DP--dG~~iel~~~~  144 (153)
                      +.|+.+.++|++++.+-..+ .|.++......   ....|+..+  .+..+.+++..
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~l~l~~~~   55 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL---GGLVFLSRDPDEHHQIALITGR   55 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccC---CcEEEEEecCCCceEEEEEecC
Confidence            57999999999999999886 89887754421   123455443  34567777653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.06  E-value=5.6  Score=25.01  Aligned_cols=50  Identities=16%  Similarity=0.291  Sum_probs=34.9

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCC-CCEEEEeccC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPD-DYWIEIFDLK  144 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPd-G~~iel~~~~  144 (153)
                      .+.|+.+.|+|++++.+-..+ .|.++.....     ..+++..++ +..+.|.+..
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~-----~~~~l~~~~~~~~l~l~~~~   53 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERTD-----STAVLGTGGKRPLLVLEEDP   53 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcCC-----CEEEEecCCCeEEEEEEeCC
Confidence            467999999999999999886 7988876531     124444444 4566666643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=86.61  E-value=3.8  Score=28.74  Aligned_cols=56  Identities=14%  Similarity=0.108  Sum_probs=39.0

Q ss_pred             CcceEEEEeC--CHHHHHHHHHh-cCCeEeecCCC-c--ccceEEEEECCCC-CEEEEeccCc
Q 031774           90 GFGHIGITVD--DVYKACERFER-LGVEFAKKPDG-G--KLKGVAFIKDPDD-YWIEIFDLKT  145 (153)
Q Consensus        90 g~~hl~f~v~--di~~~~~~l~~-~G~~~~~~~~~-~--~~~~~~~~~DPdG-~~iel~~~~~  145 (153)
                      ++.|+++.|+  |++++.+-..+ .|.+....... .  ......++..|+| ..++|.++..
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~   65 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPAS   65 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCC
Confidence            5789999999  99999998755 89877653321 1  1123456777765 5688888654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=86.43  E-value=5  Score=25.20  Aligned_cols=25  Identities=36%  Similarity=0.712  Sum_probs=22.3

Q ss_pred             ceEEEEeCCHHHHHHHHHhcCCeEe
Q 031774           92 GHIGITVDDVYKACERFERLGVEFA  116 (153)
Q Consensus        92 ~hl~f~v~di~~~~~~l~~~G~~~~  116 (153)
                      .|+.+.|+|++++.+-.++.|.++.
T Consensus         2 ~~i~l~V~D~~~a~~FY~~LGf~~~   26 (122)
T cd07235           2 DAVGIVVADMAKSLDFYRRLGFDFP   26 (122)
T ss_pred             ceEEEEeccHHHHHHHHHHhCceec
Confidence            5999999999999999988898765

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=86.37  E-value=5.4  Score=24.83  Aligned_cols=52  Identities=19%  Similarity=0.282  Sum_probs=35.1

Q ss_pred             ceEEEEeCCHHHHHHHHHhc-CCeEeecCC-CcccceEEEEECCC---CCEEEEecc
Q 031774           92 GHIGITVDDVYKACERFERL-GVEFAKKPD-GGKLKGVAFIKDPD---DYWIEIFDL  143 (153)
Q Consensus        92 ~hl~f~v~di~~~~~~l~~~-G~~~~~~~~-~~~~~~~~~~~DPd---G~~iel~~~  143 (153)
                      .|+++.|+|++++.+-..+. |.++..... .......+++..++   +..+++.+.
T Consensus         2 ~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~   58 (121)
T cd07233           2 LHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYN   58 (121)
T ss_pred             eeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEec
Confidence            69999999999999999864 998875432 21111234555444   578888764

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=86.25  E-value=6.1  Score=24.58  Aligned_cols=29  Identities=21%  Similarity=0.426  Sum_probs=25.1

Q ss_pred             CcceEEEEeCCHHHHHHHHHhcCCeEeec
Q 031774           90 GFGHIGITVDDVYKACERFERLGVEFAKK  118 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~~G~~~~~~  118 (153)
                      ++.|+++.|+|++++.+-....|..+...
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~~   30 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVREE   30 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEee
Confidence            57899999999999999998899887643

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd04895 ACT_ACR_1 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein)

Probab=85.78  E-value=3.4  Score=24.35  Aligned_cols=39  Identities=15%  Similarity=0.116  Sum_probs=29.1

Q ss_pred             HHHHHHHHHhcCCeEeecCC--Cccc-ceEEEEECCCCCEEE
Q 031774          101 VYKACERFERLGVEFAKKPD--GGKL-KGVAFIKDPDDYWIE  139 (153)
Q Consensus       101 i~~~~~~l~~~G~~~~~~~~--~~~~-~~~~~~~DPdG~~ie  139 (153)
                      +.++.+.|...|+.+...-.  .|.. ...||+.|++|+.+.
T Consensus        15 L~~i~~~l~~~gl~I~~AkIsT~Gerv~DvFyV~d~~g~kl~   56 (72)
T cd04895          15 LLEAVQVLTDLDLCITKAYISSDGGWFMDVFHVTDQLGNKLT   56 (72)
T ss_pred             HHHHHHHHHHCCcEEEEEEEeecCCeEEEEEEEECCCCCCCC
Confidence            67888899999999986442  2322 348999999998773

This CD includes the N-terminal ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). ACR proteins, found only in Arabidopsis and Oryza, as yet, are proposed to function as novel regulatory or sensor proteins in plants. Nine ACR gene products have been described (ACR1-8 in Arabidopsis and OsARC1-9 in Oryza) and are represented in this CD. Members of this CD belong to the superfamily of ACT regulatory domains.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=85.54  E-value=7.2  Score=27.34  Aligned_cols=31  Identities=13%  Similarity=0.167  Sum_probs=26.1

Q ss_pred             CCcceEEEEeCCHHHHHHHHH-hcCCeEeecC
Q 031774           89 RGFGHIGITVDDVYKACERFE-RLGVEFAKKP  119 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~-~~G~~~~~~~  119 (153)
                      ..++|.+|.|.|+++..+-.. ..|.++....
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~   57 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRL   57 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEE
Confidence            467999999999999999886 5799887553

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=85.20  E-value=7.6  Score=25.12  Aligned_cols=51  Identities=25%  Similarity=0.383  Sum_probs=34.0

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECC---CCCEEEEecc
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDP---DDYWIEIFDL  143 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DP---dG~~iel~~~  143 (153)
                      ..+.|+++.|+|+++..+-.++ .|.++......    ...|+..+   ..+.+.+...
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~----~~~~~~~~~~~~~~~i~l~~~   56 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG----RGAFLRAAGGGDHHNLFLIKT   56 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC----cEEEEECCCCCCCcEEEEecC
Confidence            3678999999999999998865 69887654321    12445443   2356666553

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=84.81  E-value=6.3  Score=24.89  Aligned_cols=30  Identities=20%  Similarity=0.403  Sum_probs=25.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKP  119 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~  119 (153)
                      ++.|+++.|+|++++.+-..+ .|.++...+
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~   32 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRP   32 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCC
Confidence            567999999999999999876 699876553

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd04882 ACT_Bt0572_2 C-terminal ACT domain of a novel protein composed of just two ACT domains

Probab=83.29  E-value=3.2  Score=22.98  Aligned_cols=27  Identities=30%  Similarity=0.402  Sum_probs=23.3

Q ss_pred             CcceEEEEeCCHHHHHHHHHhcCCeEe
Q 031774           90 GFGHIGITVDDVYKACERFERLGVEFA  116 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~~G~~~~  116 (153)
                      +...+.|.+++.+.+.+.|+++|++++
T Consensus        39 ~~~~v~~~ve~~~~~~~~L~~~G~~v~   65 (65)
T cd04882          39 GKALLIFRTEDIEKAIEVLQERGVELV   65 (65)
T ss_pred             CeEEEEEEeCCHHHHHHHHHHCCceEC
Confidence            456889999999999999999998763

Included in this CD is the C-terminal ACT domain of a novel protein composed of just two ACT domains, as seen in the yet uncharacterized structure (pdb 2F06) of the Bt0572 protein from Bacteroides thetaiotaomicron and related proteins. Members of this CD belong to the superfamily of ACT regulatory domains.

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.93  E-value=12  Score=25.26  Aligned_cols=43  Identities=14%  Similarity=0.151  Sum_probs=31.7

Q ss_pred             ceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           92 GHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        92 ~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      ..+.+.++|   +|.+.++|...|.         ......+++|-.|.-|.|+-+
T Consensus        79 ~S~~v~~~~q~E~Drlwnal~~~g~---------e~~~cgW~kDKfGVSWQi~p~  124 (151)
T COG3865          79 FSFQVACDDQEEIDRLWNALSDNGG---------EAEACGWLKDKFGVSWQIVPR  124 (151)
T ss_pred             EEEEEEcCCHHHHHHHHHHHhccCc---------chhcceeEecccCcEEEEcHH
Confidence            355566664   8888999998886         112346899999999999764

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=82.33  E-value=9.4  Score=23.66  Aligned_cols=30  Identities=27%  Similarity=0.458  Sum_probs=26.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKP  119 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~  119 (153)
                      ++.|+.+.|+|+++..+-.++ .|.+.....
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~   33 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRFG   33 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeeccc
Confidence            678999999999999999987 798887554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN02367 lactoylglutathione lyase

Probab=80.82  E-value=11  Score=27.54  Aligned_cols=31  Identities=13%  Similarity=0.149  Sum_probs=25.9

Q ss_pred             CCcceEEEEeCCHHHHHHHHH-hcCCeEeecC
Q 031774           89 RGFGHIGITVDDVYKACERFE-RLGVEFAKKP  119 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~-~~G~~~~~~~  119 (153)
                      -.++|.+++|.|+++..+-.. ..|.++....
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~  105 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRL  105 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEE
Confidence            467899999999999999985 5799887543

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=80.57  E-value=13  Score=24.27  Aligned_cols=30  Identities=17%  Similarity=0.210  Sum_probs=25.0

Q ss_pred             CcceEEEEeCCHHHHHHHHH-hcCCeEeecC
Q 031774           90 GFGHIGITVDDVYKACERFE-RLGVEFAKKP  119 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~-~~G~~~~~~~  119 (153)
                      .+.|+++.|.|+++..+--. ..|.++....
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~   32 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHE   32 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeee
Confidence            46799999999999999995 5799886533

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=80.24  E-value=11  Score=23.28  Aligned_cols=52  Identities=33%  Similarity=0.550  Sum_probs=34.2

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCC---CcccceEEEEECCCCCEEEEec
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPD---GGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~---~~~~~~~~~~~DPdG~~iel~~  142 (153)
                      |++|+++.|.|+++..+-..+ .|.++.....   ........++...+. .+++..
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~   56 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEG-HIELFL   56 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSS-CEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccccc-ceeeee
Confidence            468999999999999998876 6988875443   112223444555543 455554

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	153
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		4e-57
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		3e-53
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		3e-53
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		6e-53
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		1e-18
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		4e-12

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score =  216 bits (550), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 100/149 (67%), Positives = 118/149 (79%), Gaps = 1/149 (0%)
Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF +
Sbjct: 36  MLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSR 95
Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD
Sbjct: 96  KATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD 154
Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AFI+DPD YWIEI +   I  I
Sbjct: 155 DGKMKGLAFIQDPDGYWIEILNPNKIATI 183

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score =  203 bits (517), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 112/142 (78%), Gaps = 1/142 (0%)
Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   +
Sbjct: 35  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 94
Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD
Sbjct: 95  KATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD 153
Query: 121 GGKLKGVAFIKDPDDYWIEIFD 142
            GK+KG+AFI+DPD YWIEI +
Sbjct: 154 DGKMKGLAFIQDPDGYWIEILN 175

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score =  203 bits (517), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 112/142 (78%), Gaps = 1/142 (0%)
Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   +
Sbjct: 39  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 98
Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD
Sbjct: 99  KATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD 157
Query: 121 GGKLKGVAFIKDPDDYWIEIFD 142
            GK+KG+AFI+DPD YWIEI +
Sbjct: 158 DGKMKGLAFIQDPDGYWIEILN 179

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score =  202 bits (514), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 112/142 (78%), Gaps = 1/142 (0%)
Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   +
Sbjct: 35  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 94
Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD
Sbjct: 95  KATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD 153
Query: 121 GGKLKGVAFIKDPDDYWIEIFD 142
            GK+KG+AFI+DPD YWI+I +
Sbjct: 154 DGKMKGLAFIQDPDGYWIQILN 175

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 27/150 (18%)
Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY      P            +
Sbjct: 7   MLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY-----GPET----------E 51
Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-- 118
            A IELT+NWG +       Y  G +    +GHI ++VD+  +ACE+  + G    ++  
Sbjct: 52  EAVIELTYNWGVDK------YELGTA----YGHIALSVDNAAEACEKIRQNGGNVTREAG 101
Query: 119 PDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 148
           P  G    +AF++DPD Y IE+ + K  G+
Sbjct: 102 PVKGGTTVIAFVEDPDGYKIELIEEKDAGR 131

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 28/146 (19%)
Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+ D   S+ FY+  LGM +L++ D PE K++L FLGY    S+              
Sbjct: 13  MIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSS-------------- 58
Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              +ELT+N+G  S                +GHI I V+DV +      +  V    + +
Sbjct: 59  -TVLELTYNYGVTS----------YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE 107
Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTI 146
            G +   AF+ DPD Y+IE+ + KT+
Sbjct: 108 SGFM---AFVVDPDGYYIELLNEKTM 130

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	153
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	6e-64
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	5e-51
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	2e-48
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	3e-36
2p25_A	126	Glyoxalase family protein; structural genomics, MC	3e-25
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	3e-22
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	3e-22
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	5e-20
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	4e-19
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	8e-18
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	3e-16
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	2e-14
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-14
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	2e-11
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	2e-11
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-11
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	3e-11
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-11
3ghj_A	141	Putative integron gene cassette protein; integron	1e-09
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	2e-09
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-09
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-08
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	1e-08
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	2e-08
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	2e-08
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	3e-08
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	3e-08
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	5e-08
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	7e-08
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-07
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	4e-07
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	7e-07
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	7e-07
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-06
1nki_A	135	Probable fosfomycin resistance protein; potassium	1e-06
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-06
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	2e-06
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-06
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	3e-06
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-06
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	8e-06
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	8e-06
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	8e-06
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	3e-05
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	7e-05
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	1e-04
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	2e-04
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	2e-04
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	4e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	6e-04

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  192 bits (490), Expect = 6e-64
 Identities = 100/149 (67%), Positives = 116/149 (77%), Gaps = 1/149 (0%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF +
Sbjct: 36  MLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSR 95

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            AT+ELTHNWGTE D     YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD
Sbjct: 96  KATLELTHNWGTEDDETQS-YHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD 154

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AFI+DPD YWIEI +   I  I
Sbjct: 155 DGKMKGLAFIQDPDGYWIEILNPNKIATI 183

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  158 bits (401), Expect = 5e-51
 Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 27/150 (18%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY                    
Sbjct: 7   MLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETE--------------- 51

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK--K 118
            A IELT+NWG +                 +GHI ++VD+  +ACE+  + G    +   
Sbjct: 52  EAVIELTYNWGVDK----------YELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAG 101

Query: 119 PDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 148
           P  G    +AF++DPD Y IE+ + K  G+
Sbjct: 102 PVKGGTTVIAFVEDPDGYKIELIEEKDAGR 131

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  152 bits (385), Expect = 2e-48
 Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 28/142 (19%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+ D   S+ FY+  LGM +L++ D PE K++L FLGY    S+              
Sbjct: 13  MIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSST------------- 59

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              +ELT+N+G  S      Y +       +GHI I V+DV +      +  V    + +
Sbjct: 60  --VLELTYNYGVTS------YKHDE----AYGHIAIGVEDVKELVADMRKHDVPIDYEDE 107

Query: 121 GGKLKGVAFIKDPDDYWIEIFD 142
            G +   AF+ DPD Y+IE+ +
Sbjct: 108 SGFM---AFVVDPDGYYIELLN 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  120 bits (304), Expect = 3e-36
 Identities = 29/143 (20%), Positives = 49/143 (34%), Gaps = 21/143 (14%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              + D   S +FY   LG  +++    P+       L   D                  
Sbjct: 10  ALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDI----------------- 52

Query: 61  PATIELTHNWGTESD-PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 119
              +E+  N  T+S+        +   E  G  H+   V+DV  + +    LG+   +  
Sbjct: 53  --ELEIFGNKLTDSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVR 110

Query: 120 -DGGKLKGVAFIKDPDDYWIEIF 141
            D    K +AF  DPD   +E+ 
Sbjct: 111 YDDYTGKKMAFFFDPDGLPLELH 133

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 92.5 bits (230), Expect = 3e-25
 Identities = 23/142 (16%), Positives = 41/142 (28%), Gaps = 27/142 (19%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
                + + + +FY   LG  +L+    PE       L                      
Sbjct: 10  AINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ----------------- 52

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
              +E+  +    + P          E  G  H+   V+ + +        G+E      
Sbjct: 53  --ELEIFISDQFPARPS-------YPEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRV 103

Query: 120 DGGKLKGVAFIKDPDDYWIEIF 141
           D    K + F  DPD   +E+ 
Sbjct: 104 DDFTGKKMTFFFDPDGLPLELH 125

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 85.2 bits (211), Expect = 3e-22
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 26/145 (17%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              + D + +  FY  +LG  + + +  PE   S+ F+   +T                 
Sbjct: 10  AIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNT----------------- 52

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
              +EL H  G +S           ++  G  HI I VD++  A    ++  +    +  
Sbjct: 53  --KMELLHPLGLDSPIA---GFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEV 107

Query: 120 -DGGKLKGVAFI--KDPDDYWIEIF 141
             G   K V F+  KD     +E+ 
Sbjct: 108 KIGAHGKPVIFLHPKDCGGVLVELE 132

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 85.6 bits (212), Expect = 3e-22
 Identities = 28/144 (19%), Positives = 41/144 (28%), Gaps = 27/144 (18%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              +   K  L FY   L + LL   D P     + FL   ++                 
Sbjct: 13  GIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGES----------------- 55

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
              IEL      ES         G        HI I V  + +  +  +  GV+      
Sbjct: 56  --KIELLEPLSEESPIAKFIQKRGEG----IHHIAIGVKSIEERIQEVKENGVQMINDEP 109

Query: 120 -DGGKLKGVAFI--KDPDDYWIEI 140
             G +   VAF+  +       E 
Sbjct: 110 VPGARGAQVAFLHPRSARGVLYEF 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 79.4 bits (196), Expect = 5e-20
 Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 27/143 (18%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
            + +K+   +L  + R+  +   + +     K  + F+                      
Sbjct: 12  GYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGY----------------- 54

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
              +EL    G +S P  K    G        HI   V+D+ K+ E   ++G    KK  
Sbjct: 55  --RVELVAPDGEDS-PINKTIKKG----STPYHICYEVEDIQKSIEEMSQIGYTLFKKAE 107

Query: 120 --DGGKLKGVAFIKDPDDYWIEI 140
                  + VAF+   D   IE+
Sbjct: 108 IAPAIDNRKVAFLFSTDIGLIEL 130

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 77.2 bits (190), Expect = 4e-19
 Identities = 20/144 (13%), Positives = 38/144 (26%), Gaps = 37/144 (25%)

Query: 1   MFRI--KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 58
           + R+   D   +L+FY  +L   +  R + P+    L  +      +   + +       
Sbjct: 9   LSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIAGSEEAL------- 61

Query: 59  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 118
                                       +P         VD + K     E  G E  + 
Sbjct: 62  ----------------------------KPFRNTQATFLVDSLDKFKTFLEENGAEIIRG 93

Query: 119 PDGGKLKGVAFIKDPDDYWIEIFD 142
           P          ++  D   IE  +
Sbjct: 94  PSKVPTGRNMTVRHSDGSVIEYVE 117

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 73.4 bits (180), Expect = 8e-18
 Identities = 27/144 (18%), Positives = 45/144 (31%), Gaps = 30/144 (20%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
                + +    FY    G +     +     F+ YFL +ED                  
Sbjct: 8   ALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDG----------------- 50

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAK 117
            A +E+                    E  G+ HI I+    + V +  E+  + G   A 
Sbjct: 51  -ARLEIMSRTDVTGKT--------TGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAG 101

Query: 118 KP-DGGKLKGVAFIKDPDDYWIEI 140
           +P   G     + + DP+   IEI
Sbjct: 102 EPRMTGDGYYESVVLDPEGNRIEI 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 70.3 bits (172), Expect = 3e-16
 Identities = 23/143 (16%), Positives = 39/143 (27%), Gaps = 21/143 (14%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              ++D + S  FY  +LG+  L   + P     L                    +    
Sbjct: 24  ALNVQDMQASRYFYGTILGLHELTDDEVPATLTEL------------VASGKVANFITPD 71

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY--KACERFERLGVEFAKK 118
              ++L                          H+   +D     +A        +  A  
Sbjct: 72  GTILDLFGEPELSPPDPNPEK-----TFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHG 126

Query: 119 P-DGGKLKGVAFIKDPDDYWIEI 140
           P      +GV +  DPD + IEI
Sbjct: 127 PVTRPTGRGV-YFYDPDGFMIEI 148

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 65.3 bits (159), Expect = 2e-14
 Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 11/141 (7%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              ++    ++ F+   +G++L  R +  E +++    G        A      + T   
Sbjct: 16  SIVVESLDNAISFFEE-IGLNLEGRANV-EGEWAGRVTGLGSQCVEIA-----MMVTPDG 68

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
            + IEL+      +  D +          G+  +  TV+D+ +   R  + G E   +  
Sbjct: 69  HSRIELSRFLTPPTIADHR---TAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVV 125

Query: 120 DGGKLKGVAFIKDPDDYWIEI 140
                  + +I+  +   I +
Sbjct: 126 QYENSYRLCYIRGVEGILIGL 146

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 64.4 bits (156), Expect = 5e-14
 Identities = 21/141 (14%), Positives = 38/141 (26%), Gaps = 22/141 (15%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              + D   +  FY+  LG  +   +     ++           +               
Sbjct: 31  NVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQ-------------- 76

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              + L  +      P  +          G       VDD+    ER   LGV F ++P 
Sbjct: 77  ---LLLEPSSHAAVTPFKEALVAD-----GIPAASFAVDDIAAEYERLSALGVRFTQEPT 128

Query: 121 GGKLKGVAFIKDPDDYWIEIF 141
                  A + D     I++ 
Sbjct: 129 DMGPVVTAILDDTCGNLIQLM 149

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 57.5 bits (139), Expect = 2e-11
 Identities = 22/141 (15%), Positives = 39/141 (27%), Gaps = 29/141 (20%)

Query: 3   RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA 62
              D   +  FY  V G+ ++ +                         +   +  F    
Sbjct: 15  YADDLDAAEAFYRDVFGLEMVLK-------------------------LPGQLVFFKCGR 49

Query: 63  TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKP 119
            + L  +    S  D       +    G GH     D   +V +   RFE L +      
Sbjct: 50  QMLLLFDPQESSRADANNPIPRH-GAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYH 108

Query: 120 DGGKLKGVAFIKDPDDYWIEI 140
                    +I+DP    +E+
Sbjct: 109 RWPNGSYSVYIRDPAGNSVEV 129

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 56.8 bits (137), Expect = 2e-11
 Identities = 15/139 (10%), Positives = 34/139 (24%), Gaps = 35/139 (25%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 61
             +   + +  FY   +GM  + + +  + +   +F           +            
Sbjct: 18  APVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQ----------- 66

Query: 62  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG 121
                                  N  P    H    V  + +  +   + G+E       
Sbjct: 67  -----------------------NFNPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDHAR 103

Query: 122 GKLKGVAFIKDPDDYWIEI 140
             +    ++ DP    IE 
Sbjct: 104 PDVIRF-YVSDPFGNRIEF 121

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 57.0 bits (137), Expect = 3e-11
 Identities = 22/150 (14%), Positives = 34/150 (22%), Gaps = 35/150 (23%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
                D  VS  F+  VLG  +    + P+ +F    L   D                  
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVM-------------LEG 54

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
            A        G    P   G            +    V D+    +R      +      
Sbjct: 55  IAGKSRKWLSGDLEFPLGSGV-----------NFQWDVIDIEPLYQRVNESAADSIYLAL 103

Query: 120 ------DGGKLKGV--AFIKDPDDYWIEIF 141
                  G  +       ++ PD Y     
Sbjct: 104 ESKSYQCGDSIATQKQFMVQTPDGYLFRFC 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 56.5 bits (136), Expect = 3e-11
 Identities = 19/147 (12%), Positives = 37/147 (25%), Gaps = 31/147 (21%)

Query: 3   RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA 62
                   + FY   L +  +         +     G                       
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA-----------------DY 59

Query: 63  TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKP 119
            +E T   G  + P           P     +   V +   +     + + +G +  +  
Sbjct: 60  HLEFTQYEGGSTAPV----------PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESE 109

Query: 120 DGGKLKGVAFIKDPDDYWIEIFDLKTI 146
           +     G   I+DPD + I   + K I
Sbjct: 110 NPYWSNGGVTIEDPDGWRIVFMNSKGI 136

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 56.2 bits (136), Expect = 4e-11
 Identities = 21/140 (15%), Positives = 36/140 (25%), Gaps = 31/140 (22%)

Query: 5   KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 64
           +D  +S  +Y+ +L    L R       F                               
Sbjct: 14  RDLDISCRWYTEILDWKELVRGRGDTTSF--AHGVLPGG-------------------LS 52

Query: 65  ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG 121
            +           F           G  H+  +V    D+    ER  + G  F    + 
Sbjct: 53  IVLREHDGGGTDLFDETR------PGLDHLSFSVESMTDLDVLEERLAKAGAAFTPTQEL 106

Query: 122 GKLKGVAFIKDPDDYWIEIF 141
                +AF +D D+  +E  
Sbjct: 107 PFGWILAF-RDADNIALEAM 125

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 52.3 bits (126), Expect = 1e-09
 Identities = 17/142 (11%), Positives = 45/142 (31%), Gaps = 40/142 (28%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 61
            ++K+ + S  FY+ +LG            +++  ++                    G+ 
Sbjct: 34  VKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVS-------------------GRA 72

Query: 62  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKP 119
             + L      + + +               H    V+  ++    +  E  GV      
Sbjct: 73  GMVVL------QEEKENWQQQ----------HFSFRVEKSEIEPLKKALESKGVSVHGPV 116

Query: 120 DGGKLKGVA-FIKDPDDYWIEI 140
           +   ++ V+ +  DP+ + +E 
Sbjct: 117 NQEWMQAVSLYFADPNGHALEF 138

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 52.0 bits (124), Expect = 2e-09
 Identities = 28/145 (19%), Positives = 49/145 (33%), Gaps = 37/145 (25%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           +  +K  K +  FYS++LGM   + + F E + +L F                       
Sbjct: 32  VMTVKSIKDTTMFYSKILGM---EVMTFKEDRKALCFGDQ-------------------- 68

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
                L H  G E +P        +  P       IT   + +  +  +   V   + P 
Sbjct: 69  --KFNL-HEVGKEFEP-----KAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPV 120

Query: 120 ----DGGKLKGVAFIKDPDDYWIEI 140
                 G +  + + +DPD   IE+
Sbjct: 121 PRTGAKGPIMSI-YFRDPDRNLIEV 144

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 51.6 bits (123), Expect = 3e-09
 Identities = 28/143 (19%), Positives = 45/143 (31%), Gaps = 35/143 (24%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 61
             + D   ++ FY  VLG S +    F + + +L F                        
Sbjct: 29  LTVSDISTTIRFYEEVLGFSAVT---FKQNRKALIFGAQ--------------------- 64

Query: 62  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 119
             I L H    E +P           P       IT   +        + G+   + P  
Sbjct: 65  -KINL-HQQEMEFEP-----KASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVE 117

Query: 120 -DGGKLKGVA-FIKDPDDYWIEI 140
             G   + ++ +I+DPD   IEI
Sbjct: 118 RTGATGEIMSIYIRDPDGNLIEI 140

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 49.9 bits (119), Expect = 1e-08
 Identities = 23/145 (15%), Positives = 43/145 (29%), Gaps = 36/145 (24%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           +  ++D   S  FY   LG+ +L+        F L+  G+                    
Sbjct: 13  IPFVRDINRSKSFYRDRLGLKILEDFG----SFVLFETGF---------------AIHEG 53

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF----A 116
            +  E      +++   +               +     DV  A +      VE      
Sbjct: 54  RSLEETIWRTSSDAQEAYGR---------RNMLLYFEHADVDAAFQDIAP-HVELIHPLE 103

Query: 117 KKPDGGKLKGVAFIKDPDDYWIEIF 141
           ++  G +   V    DPD + IE+ 
Sbjct: 104 RQAWGQR---VFRFYDPDGHAIEVG 125

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 49.7 bits (118), Expect = 1e-08
 Identities = 22/142 (15%), Positives = 37/142 (26%), Gaps = 23/142 (16%)

Query: 5   KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 64
            D   +  +Y    G   L R + PE       +      +                  +
Sbjct: 18  PDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHM-------------TQV 64

Query: 65  ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF----AKKPD 120
           ++      ES        +         H+   VDD+          GV+      K   
Sbjct: 65  QVMAPLNDESTVAKWLAKHNGRAG--LHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGT 122

Query: 121 GGKLKGVAFI--KDPDDYWIEI 140
           GG    + F+  K      IE+
Sbjct: 123 GGNR--INFMHPKSGKGVLIEL 142

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 49.4 bits (118), Expect = 2e-08
 Identities = 23/142 (16%), Positives = 47/142 (33%), Gaps = 38/142 (26%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              + D + S+ F+  +LG++L  R +        Y    +                   
Sbjct: 9   TLAVSDLQKSVTFWHELLGLTLHARWNT-----GAYLTCGDLW----------------- 46

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKK 118
              + L+++   +  P          +   + H   TV  +D     +R E+ GV   K+
Sbjct: 47  ---VCLSYDEARQYVP---------PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQ 94

Query: 119 PDGGKLKGVAFIKDPDDYWIEI 140
                     +  DPD + +E+
Sbjct: 95  NKSEG-ASF-YFLDPDGHKLEL 114

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 48.2 bits (115), Expect = 3e-08
 Identities = 19/145 (13%), Positives = 34/145 (23%), Gaps = 44/145 (30%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              + D   + +F  +  G++                                       
Sbjct: 8   NLTVADVVAAREFLEKYFGLTCSGTRGNA-------------------------FAVMRD 42

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAK 117
                LT   G E              P+ F H+G   +    V K  +R +  G     
Sbjct: 43  NDGFILTLMKGKEVQY-----------PKTF-HVGFPQESEEQVDKINQRLKEDGFLVEP 90

Query: 118 KPDGGKLKGVAF-IKDPDDYWIEIF 141
                      F ++ P  + IE+ 
Sbjct: 91  PKHAH---AYTFYVEAPGGFTIEVM 112

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 48.4 bits (115), Expect = 3e-08
 Identities = 28/144 (19%), Positives = 44/144 (30%), Gaps = 37/144 (25%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 61
             + D   + +FY +VLGM     + F   + +L F   +                    
Sbjct: 16  LTVADIPTTTNFYEKVLGMKA---VSFGAGRIALEFGHQKIN------------------ 54

Query: 62  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 119
                 H  G E +P        N          IT   +  A +  E  GV   + P  
Sbjct: 55  -----LHQLGNEFEP-----KAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVK 104

Query: 120 ---DGGKLKGVAFIKDPDDYWIEI 140
                G +    + +DPD   IE+
Sbjct: 105 RTGAQGAITSF-YFRDPDGNLIEV 127

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 48.0 bits (114), Expect = 5e-08
 Identities = 23/145 (15%), Positives = 38/145 (26%), Gaps = 35/145 (24%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
                  +  L FY R++G        F   K      G E   +               
Sbjct: 11  TINTSHLQGMLGFY-RIIG------FQFTASKVDK---GSEVHRAVHNG----------- 49

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL-GVEFAKKP 119
                L                N          +G  + D+ K  +   ++ G      P
Sbjct: 50  -VEFSLY------------SIQNPQRSQIPSLQLGFQITDLEKTVQELVKIPGAMCILDP 96

Query: 120 DGGKLKGVAFIKDPDDYWIEIFDLK 144
                   A + DPD + IE+ +L+
Sbjct: 97  TDMPDGKKAIVLDPDGHSIELCELE 121

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 47.9 bits (114), Expect = 7e-08
 Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 14/141 (9%)

Query: 5   KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 64
           +D + SL  Y+   G+   +     +   +            P     +  +    P  +
Sbjct: 28  RDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGR-----PTKARAKLAFFELGPLQL 82

Query: 65  ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-KKPDGGK 123
           EL       S   ++ + + N E  G  HI   V D+ +  E   R G++   K    G 
Sbjct: 83  ELIEPDENPST--WREFLDKNGE--GIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEG- 137

Query: 124 LKGVAFI--KDPDDYWIEIFD 142
               A+I         IE+ +
Sbjct: 138 -GRYAYIDTLRALKVMIELLE 157

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 46.8 bits (111), Expect = 2e-07
 Identities = 24/148 (16%), Positives = 45/148 (30%), Gaps = 35/148 (23%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              +   + S+ F+  +LG                  LGYED             +  GK
Sbjct: 25  EINVDHLEESIAFWDWLLG-----------------ELGYEDYQ----SWSRGKSYKHGK 63

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAK 117
                 T+    +++  F+          G  H+       + V +  ++ +  G     
Sbjct: 64  ------TYLVFVQTEDRFQTPTFHRKRT-GLNHLAFHAASREKVDELTQKLKERGDPILY 116

Query: 118 KP----DGGKLKGVAFIKDPDDYWIEIF 141
           +      GG      F +DP+   +EI 
Sbjct: 117 EDRHPFAGGPNHYAVFCEDPNRIKVEIV 144

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 45.8 bits (108), Expect = 4e-07
 Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 36/144 (25%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           +  + +P  S  FY  +LG+  ++                             +++    
Sbjct: 30  ILYVDNPPASTQFYKALLGVDPVESSP------------------------TFSLFVLAN 65

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAK 117
              + L      E      G         G G +   V++   V +    ++  GV   +
Sbjct: 66  GMKLGLWSRHTVEPKASVTG---------GGGELAFRVENDAQVDETFAGWKASGVAMLQ 116

Query: 118 KPDGGKLKGVAFIKDPDDYWIEIF 141
           +P   +        DPD + + ++
Sbjct: 117 QPAKMEFGYTFTAADPDSHRLRVY 140

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 44.9 bits (106), Expect = 7e-07
 Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 31/141 (21%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
            F ++D +        V     +        +FSL    +                    
Sbjct: 9   TFIVRDLERMTRILEGVFDAREVYA--SDTEQFSLSREKFFL------------------ 48

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              I +    G +     + Y++            I   D  +  ER  +LG++      
Sbjct: 49  IGDIWVAIMQGEKLAE--RSYNH--------IAFKIDDADFDRYAERVGKLGLDMRPPRP 98

Query: 121 GGKLKGVA-FIKDPDDYWIEI 140
             + +G + +  D D++  E+
Sbjct: 99  RVEGEGRSIYFYDDDNHMFEL 119

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 20/153 (13%), Positives = 36/153 (23%), Gaps = 38/153 (24%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 61
              +D   + DFY   LG  L +R      + +L F G +                    
Sbjct: 15  IPARDLDEAYDFYVTKLGCKLARR---YPDRITLDFFGDQLVC----------------- 54

Query: 62  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 119
                 H              +       FG             +  ++ G+ F      
Sbjct: 55  ------HLSDRWDREVSMYPRH-------FGITFRDKKHFDNLYKLAKQRGIPFYHDLSR 101

Query: 120 ---DGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
                 +     F+ DP +  +E         +
Sbjct: 102 RFEGLIEEHETFFLIDPSNNLLEFKYYFDDRMM 134

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 44.4 bits (105), Expect = 1e-06
 Identities = 25/145 (17%), Positives = 36/145 (24%), Gaps = 49/145 (33%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKR------LDFPEMKFSLYFLGYEDTASAPADPVDRTV 55
             + D   S+ FY  +LG  L  R      L+   +   L     E     PA       
Sbjct: 10  LAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSR---EPQYGGPAAD----- 61

Query: 56  WTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF 115
                      TH                          GI   D  +   +    GV  
Sbjct: 62  ----------YTHY-----------------------AFGIAAADFARFAAQLRAHGVRE 88

Query: 116 AKKPDGGKLKGVAFIKDPDDYWIEI 140
            K+          +  DPD + +E 
Sbjct: 89  WKQNRSEG-DSF-YFLDPDGHRLEA 111

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 43.6 bits (103), Expect = 2e-06
 Identities = 17/145 (11%), Positives = 35/145 (24%), Gaps = 45/145 (31%)

Query: 5   KDPKVSLDFYSRVLGMSLLKRLD-FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT 63
            +          +L        D F +     + L        P +     +        
Sbjct: 14  SNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSGII------- 66

Query: 64  IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD--- 120
                                         I I V+DV +  +R   LG++    P    
Sbjct: 67  ------------------------------IHIEVEDVDQNYKRLNELGIKVLHGPTVTD 96

Query: 121 -GGKLKGVAFIKDPDDYWIEIFDLK 144
            G +      ++ P    ++ + +K
Sbjct: 97  WGTE---SLLVQGPAGLVLDFYRMK 118

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 27/141 (19%)

Query: 3   RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA 62
             K+   +  FY  VLG+  +K     +     Y L Y D   +P      T  +F    
Sbjct: 37  VTKNANENNHFYKNVLGLRRVKMTVNQDDPSM-YHLFYGDKTGSPG-----TELSFF--- 87

Query: 63  TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKP 119
                         +                IG+ V     ++   ERFE+  V+ ++  
Sbjct: 88  --------------EIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMT 133

Query: 120 DGGKLKGVAFIKDPDDYWIEI 140
                  + F +D +   + +
Sbjct: 134 TYANRPALQF-EDAEGLRLVL 153

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 22/144 (15%), Positives = 45/144 (31%), Gaps = 37/144 (25%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 61
             +KD   +  F   +     +      +  FSL    +   A                 
Sbjct: 10  LIVKDLNKTTAFLQNIFNAEEIYS--SGDKTFSLSKEKFFLIAG---------------- 51

Query: 62  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEF--AK 117
             I +                  + + R + HI   +  ++V +  ER + LGVE    +
Sbjct: 52  LWICIMEGD--------------SLQERTYNHIAFQIQSEEVDEYTERIKALGVEMKPER 97

Query: 118 KPDGGKLKGVAFIKDPDDYWIEIF 141
               G+ + + +  D D++  E+ 
Sbjct: 98  PRVQGEGRSI-YFYDFDNHLFELH 120

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 44.3 bits (104), Expect = 3e-06
 Identities = 26/172 (15%), Positives = 42/172 (24%), Gaps = 40/172 (23%)

Query: 5   KDPKVSLDFYSRVLGMSLLKR-------------LDF---PEMKFSLYFLGY----EDTA 44
            +    L FY+ +LG   +               + F    +     Y +          
Sbjct: 35  AELDRMLAFYTNMLGAQHVHEQADAFTIQLGVSQIQFRAAADGTKPFYHIAINIAANHFQ 94

Query: 45  SAPADPVDRTVWTFGKPATIELTHNWGTES----DPD-----FKGYHN---------GNS 86
              A                     +   S    DP                        
Sbjct: 95  EGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAAPVLDKPFSAD 154

Query: 87  EPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWI 138
           +    G I IT  DV +A  R ++       K D  +  G+ FI D D + +
Sbjct: 155 QLLSIGEINITTSDVEQAATRLKQAE--LPVKLDQIEPAGLNFIGDQDLFLL 204

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 42.6 bits (100), Expect = 5e-06
 Identities = 22/147 (14%), Positives = 33/147 (22%), Gaps = 43/147 (29%)

Query: 5   KDPKVSLDFYSRVLGMSLLKRLD---FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 61
           +D      FY +V G   ++ +    F  +      +G                  F   
Sbjct: 17  RDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIG------------------FNAH 58

Query: 62  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKK 118
              EL          +  G             +   VD    V K        G    K 
Sbjct: 59  EAYEL---MQLAQFSETSG---------IKFLLNFDVDTKEAVDKLVPVAIAAGATLIKA 106

Query: 119 P----DGGKLKGVAFIKDPDDYWIEIF 141
           P            A + DP+     I 
Sbjct: 107 PYETYYHWY---QAVLLDPERNVFRIN 130

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 42.4 bits (99), Expect = 8e-06
 Identities = 19/144 (13%), Positives = 39/144 (27%), Gaps = 36/144 (25%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           +F +K+P  S +FY  +L    ++                              ++    
Sbjct: 11  LFYVKNPAKSEEFYKNLLDTQPIESSP------------------------TFAMFVMKT 46

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAK 117
              + L      E      G         G   +   V   + V +   ++    +   +
Sbjct: 47  GLRLGLWAQEEIEPKAHQTG---------GGMELSFQVNSNEMVDEIHRQWSDKEISIIQ 97

Query: 118 KPDGGKLKGVAFIKDPDDYWIEIF 141
            P            DPD++ + IF
Sbjct: 98  PPTQMDFGYTFVGVDPDEHRLRIF 121

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 41.7 bits (98), Expect = 8e-06
 Identities = 20/145 (13%), Positives = 37/145 (25%), Gaps = 44/145 (30%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
                +P  +  FY  +LGM +     +                          + T   
Sbjct: 12  NIATPEPARAQAFYGDILGMPVAMDHGW--------------------------IVTHAS 45

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK--- 117
           P       ++  E                    + I VD+  +   R  + G+       
Sbjct: 46  PLEAHAQVSFAREGGSG-----------TDVPDLSIEVDNFDEVHARILKAGLPIEYGPV 94

Query: 118 -KPDGGKLKGVAFIKDPDDYWIEIF 141
            +  G +     F++DP    I I 
Sbjct: 95  TEAWGVQ---RLFLRDPFGKLINIL 116

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 42.1 bits (99), Expect = 8e-06
 Identities = 21/143 (14%), Positives = 36/143 (25%), Gaps = 35/143 (24%)

Query: 3   RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA 62
              DP  ++D+  RV G  LL R            L                        
Sbjct: 9   AYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTGG-------------------G 48

Query: 63  TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF----AKK 118
            + +       +     G             + + V DV +   R    G +       K
Sbjct: 49  IVMVRRTGEPYTVSCAGG--------HTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDK 100

Query: 119 PDGGKLKGVAFIKDPDDYWIEIF 141
           P G +      ++D + +  E  
Sbjct: 101 PWGLR---QYLVRDLEGHLWEFT 120

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 22/138 (15%), Positives = 36/138 (26%), Gaps = 28/138 (20%)

Query: 5   KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 64
            D + S  FY    G + + R      +   Y +     A+                   
Sbjct: 14  GDLEASARFYGEGFGWAPVFRNP----EIIFYQMNGFVLATWLVQ--------------- 54

Query: 65  ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL 124
            L  + G                     H      +V    ER    G +  +  D    
Sbjct: 55  NLQEDVGVAVTSRPGSMA--------LAHNVRAETEVAPLMERLVAAGGQLLRPADAPPH 106

Query: 125 KGV-AFIKDPDDYWIEIF 141
            G+  ++ DPD +  EI 
Sbjct: 107 GGLRGYVADPDGHIWEIA 124

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 40.5 bits (94), Expect = 7e-05
 Identities = 34/144 (23%), Positives = 49/144 (34%), Gaps = 33/144 (22%)

Query: 3   RIKDPKVSLDFYSRVLGMSLLK---RLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 59
            +  P+ + DFY+ VLG+ L+K     D P      Y L + +                G
Sbjct: 15  IVGHPQENTDFYAGVLGLRLVKQTVNFDDPGT----YHLYFGNEG--------------G 56

Query: 60  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD--VYKACERFERLGVEFAK 117
           KP TI     W         G   G       G     V    +    +R E+  V + K
Sbjct: 57  KPGTIITFFPW--------AGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK 108

Query: 118 KPDGGKLKGVAFIKDPDDYWIEIF 141
               G+ + V F  DP    +EI 
Sbjct: 109 IERFGE-QYVEF-DDPHGLHLEIV 130

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 19/145 (13%), Positives = 43/145 (29%), Gaps = 32/145 (22%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           ++  KD   ++ ++  +LG             +S   +  +D               F  
Sbjct: 26  VYFTKDMDKTVKWFEEILG-------------WSGDIVARDDEGFG------DYGCVFDY 66

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
           P+ + + H         F+G+H    EP       + ++ +    +  +  G +      
Sbjct: 67  PSEVAVAHL------TPFRGFHLFKGEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIY 120

Query: 121 ----GGKLKGVAFIKDPDDYWIEIF 141
               G +      I   D   +  F
Sbjct: 121 TQPWGAR---ECSITTTDGCILRFF 142

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 29/146 (19%), Positives = 42/146 (28%), Gaps = 41/146 (28%)

Query: 5   KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 64
           +D   SL+FY R LG+ +                        PA+              I
Sbjct: 13  EDMAKSLEFY-RKLGVEI------------------------PAEADSAPHTEAVLDGGI 47

Query: 65  ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV-----DDVYKACERFERLGVEFAKKP 119
            L  +    +    + Y      P G     I         V K        G E   KP
Sbjct: 48  RLAWD----TVETVRSYDPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKP 103

Query: 120 ----DGGKLKGVAFIKDPDDYWIEIF 141
                G +    A +KDPD   +++F
Sbjct: 104 WNAVWGQR---YAIVKDPDGNVVDLF 126

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 21/147 (14%), Positives = 36/147 (24%), Gaps = 41/147 (27%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           +  + + + S DFY  +     +                                  F  
Sbjct: 18  LVYVSNVERSTDFYRFIFKKEPVFVTP--------------------------RYVAFPS 51

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGIT------VDDVYKACERFERLGVE 114
                     G E            +E   F  IGI       VD ++    + +   + 
Sbjct: 52  SGDALFAIWSGGEEPV---------AEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQII 102

Query: 115 FAKKPDGGKLKGVAFIKDPDDYWIEIF 141
             K+P          I DPD + I + 
Sbjct: 103 VIKEPYTDVFGRTFLISDPDGHIIRVC 129

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 37.6 bits (87), Expect = 4e-04
 Identities = 21/143 (14%), Positives = 43/143 (30%), Gaps = 40/143 (27%)

Query: 5   KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 64
            D   +  FY    G ++    + P+M +S+   G    +  P +P              
Sbjct: 34  DDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPG------------- 77

Query: 65  ELTHNWGTESDPDFKGYHNGNSEPRGFGH--IGITVDDVYKACERFERLGVEFAKKP--- 119
                            + G  +        + + V+ +  A ER E LG +        
Sbjct: 78  ---------------YINGGMMQRGEVTTPVVTVDVESIESALERIESLGGKTVTGRTPV 122

Query: 120 -DGGKLKGVAFIKDPDDYWIEIF 141
            + G     A+  D +   + ++
Sbjct: 123 GNMGF---AAYFTDSEGNVVGLW 142

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 37.2 bits (85), Expect = 6e-04
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 17/43 (39%)

Query: 23 LKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIE 65
          LK+L   +    LY    +D  SAPA  +          AT+E
Sbjct: 22 LKKL---QASLKLY---ADD--SAPALAIK---------ATME 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	153
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.92
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.87
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.86
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.86
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.85
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.84
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.83
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.82
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.82
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.82
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.82
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.81
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.81
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.81
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.81
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.81
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.8
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.8
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.79
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.79
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.78
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.78
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.78
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.78
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.78
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.78
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.78
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.77
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.77
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.77
3ghj_A	141	Putative integron gene cassette protein; integron	99.76
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.76
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.76
2i7r_A	118	Conserved domain protein; structural genomics cons	99.75
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.75
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.75
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.75
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.74
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.74
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.74
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.73
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.73
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.72
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.72
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.72
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.71
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.7
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.69
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.69
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.67
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.66
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.66
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.65
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.64
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.64
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.64
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.64
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.63
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.63
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.61
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.61
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.59
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.59
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.59
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.58
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.58
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.58
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.58
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.58
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.58
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.57
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.55
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.55
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.55
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.55
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.54
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.53
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.53
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.51
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.5
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.48
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.48
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.47
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.47
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.41
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.39
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.37
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.36
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.34
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.32
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.28
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.22
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.19
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.15
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.14
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.1
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.08
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.04
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.0
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.9
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.58
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.04
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	96.05
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	95.28
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	95.0
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	94.84
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	94.74
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	94.49
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	94.18
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	93.71
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	93.62
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	93.05
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	93.03
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	92.84
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	92.17
3ghj_A	141	Putative integron gene cassette protein; integron	91.66
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	91.54
2p25_A	126	Glyoxalase family protein; structural genomics, MC	90.95
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	90.25
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	90.1
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	90.08
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	90.01
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	89.9
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	88.51
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	88.29
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	87.93
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	87.75
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	87.42
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	85.92
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	85.67
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	85.55
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	85.44
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	85.38
3huh_A	152	Virulence protein STM3117; structural genomics, ny	85.33
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	84.42
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	81.07

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.92  E-value=1.6e-24  Score=150.35  Aligned_cols=148  Identities=61%  Similarity=1.179  Sum_probs=109.3

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++..+...++..+..++++.++....|.......+|...+...|++...+.....+. .++
T Consensus        40 l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~  118 (187)
T 3vw9_A           40 LRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDET-QSY  118 (187)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGGGCTT-CCC
T ss_pred             EEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCCCCCc-ccc
Confidence            7899999999999999999999887766667888888765432111112223445444557899876544322111 123


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCcccccC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG  150 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~  150 (153)
                      ..+...+.|+.|++|.|+|+++++++|+++|+++...+..+.+++.+||+|||||.|||++....+.+|
T Consensus       119 ~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~  187 (187)
T 3vw9_A          119 HNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKMATLM  187 (187)
T ss_dssp             CCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGGGSGGGC
T ss_pred             ccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEccccccCC
Confidence            334444568999999999999999999999999999887665556789999999999999988777664

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.88  E-value=4.1e-23  Score=139.56  Aligned_cols=123  Identities=17%  Similarity=0.248  Sum_probs=81.6

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|+++|++||+++|||++..+...++.  ....+...+..               ....+.+.....+...+    
T Consensus        31 ~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~--~~~~~~~~~~~---------------~~~~l~~~~~~~~~~~~----   89 (155)
T 4g6x_A           31 NVFVDDQAKAESFYTGKLGFLVKADVPVGAD--RWLTVVSPEAP---------------DGTQLLLEPSSHAAVTP----   89 (155)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCT---------------TSCEEEEEECCSTTHHH----
T ss_pred             EEEeCCHHHHHHHHHHHhCCEEEEeecCCCc--eEEEEeccCCC---------------cceEEEeccCCCccccc----
Confidence            3789999999999999999999877654432  23333322110               01222222111111000    


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      ... .....+..|++|.|+|+++++++|+++|+++..+|...++++.+||+|||||+|||+|..+
T Consensus        90 ~~~-~~~~~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A           90 FKE-ALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             HHH-HHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC--
T ss_pred             ccc-ccccCCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEECC
Confidence            000 0011367899999999999999999999999988866566678899999999999999643

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.87  E-value=1.9e-21  Score=134.69  Aligned_cols=144  Identities=68%  Similarity=1.258  Sum_probs=95.1

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......++..+..++++.++....|........|...++..|+|.........+.. ++
T Consensus        37 l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~~~~~~-~~  115 (184)
T 2za0_A           37 LRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQ-SY  115 (184)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGCTTC-CC
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCCCCccc-cc
Confidence            78999999999999999999987654334446666666532100011000011222223568888764332111110 12


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCcc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  146 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  146 (153)
                      ..++....+..|++|.|+|+++++++|+++|+++..+|..+.+++.+||+|||||+|||++....
T Consensus       116 ~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          116 HNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             CCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTTTG
T ss_pred             ccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecCcc
Confidence            22222234788999999999999999999999999888665445568999999999999997654

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.86  E-value=1.5e-20  Score=122.51  Aligned_cols=119  Identities=24%  Similarity=0.316  Sum_probs=84.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC---CCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES---DPDF   78 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~---~~~~   78 (153)
                      |.|+|++++++||+++|||++......++.....+++..+                   +..+++.......+   .+..
T Consensus        11 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~~~~~~~~   71 (134)
T 3l7t_A           11 LIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG-------------------DIELEIFGNKLTDSNYCAPPE   71 (134)
T ss_dssp             EECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET-------------------TEEEEEEECCTTSTTCCCCCC
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC-------------------CeEEEEEecccccccccCCcc
Confidence            7899999999999999999999876554444334455442                   45788876321110   0000


Q ss_pred             -CCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEec
Q 031774           79 -KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        79 -~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~  142 (153)
                       ....   ....+..|++|.|+|+++++++|+++|+++...+..... .+.+||+|||||.|||+|
T Consensus        72 ~~~~~---~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           72 RISWP---REACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             CCCSS---SCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             ccCCC---CCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence             0011   023478899999999999999999999998866644332 357899999999999986

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.86  E-value=2.8e-20  Score=121.91  Aligned_cols=119  Identities=40%  Similarity=0.743  Sum_probs=86.2

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......++..+..+++..++..               ....|++........      .
T Consensus         8 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~~------~   66 (135)
T 1f9z_A            8 LRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK------Y   66 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTT---------------TSCEEEEEEETTCCC------C
T ss_pred             EEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCC---------------CCcEEEEEEcCCCCc------c
Confidence            7899999999999999999998876544444556666653310               136788765432211      1


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc--eEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK--GVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~--~~~~~~DPdG~~iel~~~~~  145 (153)
                      .    ...+..|++|.|+|+++++++|+++|+++..+|.....+  +.+||+|||||.|||++...
T Consensus        67 ~----~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           67 E----LGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             C----CCSSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             c----CCCCccEEEEEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence            1    123678999999999999999999999998766332222  46889999999999999764

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.85  E-value=1.7e-20  Score=121.68  Aligned_cols=114  Identities=23%  Similarity=0.326  Sum_probs=84.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......++.++..+++..++                  +..|++.........+    .
T Consensus         9 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~------------------~~~l~l~~~~~~~~~~----~   66 (127)
T 3e5d_A            9 LWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED------------------GARLEIMSRTDVTGKT----T   66 (127)
T ss_dssp             EECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS------------------SCEEEEEEETTCCCCC----C
T ss_pred             EEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC------------------CcEEEEEecCCCCCCC----C
Confidence            78999999999999999999987654444445566665432                  4678887553322111    1


Q ss_pred             CCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEe
Q 031774           82 HNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  141 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  141 (153)
                          ....|..|++|.|+|   +++++++|+++|+++..+|.....+ +.+||+|||||.|||+
T Consensus        67 ----~~~~g~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           67 ----GENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             ----SSCSSCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             ----cCCCceEEEEEEcCCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence                123477999999999   8899999999999998876433333 5789999999999996

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.84  E-value=7.7e-20  Score=118.22  Aligned_cols=115  Identities=19%  Similarity=0.288  Sum_probs=79.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......++.....+++..+                   +..|++.....+...+.   .
T Consensus        11 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~~~~---~   68 (126)
T 2p25_A           11 INASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-------------------SQELEIFISDQFPARPS---Y   68 (126)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEET-------------------TEEEEEEECTTCCCCCC---S
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecC-------------------CeEEEEEeccCCCCCCC---C
Confidence            6799999999999999999998754322222122223322                   23777765432221110   1


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEec
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  142 (153)
                          ....+..|++|.|+|+++++++|+++|+++...+.....+ +.+||+|||||.|||+|
T Consensus        69 ----~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           69 ----PEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ----SCCSSCCCEEEECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             ----CCCccceEEEEEeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence                1124778999999999999999999999987665433333 57889999999999985

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.83  E-value=2.1e-19  Score=117.25  Aligned_cols=113  Identities=19%  Similarity=0.301  Sum_probs=82.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......++. ...+.+..++                 +...|++........       
T Consensus        19 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~-----------------~~~~l~l~~~~~~~~-------   73 (133)
T 4hc5_A           19 IIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPG-----------------AQTQVALGLPSWYED-------   73 (133)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTT-----------------CSCEEEEECGGGCSS-------
T ss_pred             EEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCC-----------------CceEEEEecCccccc-------
Confidence            789999999999999999999987543222 2333444322                 145677754321100       


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEec
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  142 (153)
                         ...+.+..|++|.|+|+++++++|+++|+++..+|....++ +.+||+|||||.|||+|
T Consensus        74 ---~~~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           74 ---GRKPGGYTGISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             ---CCCSCEEEEEEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             ---ccCCCCeEEEEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence               01124678999999999999999999999999777544444 68999999999999987

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.83  E-value=5.3e-20  Score=120.57  Aligned_cols=117  Identities=21%  Similarity=0.221  Sum_probs=82.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEe-ecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRL-DFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|+++|++||+ +|||++.... ..+..+...+++..+                   +..|++.....+..  ....
T Consensus        13 i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~--~~~~   70 (133)
T 3hdp_A           13 YAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING-------------------GYRVELVAPDGEDS--PINK   70 (133)
T ss_dssp             EECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET-------------------TEEEEEEEESSTTC--THHH
T ss_pred             EEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC-------------------CEEEEEEecCCCCC--hHHH
Confidence            68999999999999 9999997652 223334455555542                   46788876433221  1101


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCC--Cccc-ceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD--GGKL-KGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~--~~~~-~~~~~~~DPdG~~iel~~~  143 (153)
                      +...   ..|++|+||.|+|+++++++|+++|+++..+|.  .+.. .+.+|++|||||+|||+|.
T Consensus        71 ~~~~---~~g~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           71 TIKK---GSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             HTTT---SCEEEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             HHhc---CCceEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            1110   247889999999999999999999999987542  2222 3578999999999999973

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.82  E-value=3.1e-20  Score=124.24  Aligned_cols=112  Identities=20%  Similarity=0.244  Sum_probs=80.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++..+...++..+...+++                     .  +++.......       .
T Consensus        12 l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~---------------------~--~~l~~~~~~~-------~   61 (144)
T 3r6a_A           12 LYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS---------------------T--ILLIAGSEEA-------L   61 (144)
T ss_dssp             EEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET---------------------T--EEEEESCHHH-------H
T ss_pred             EEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec---------------------c--EEEecCCccc-------C
Confidence            78999999999999999999887654433333332221                     1  4443321100       0


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCcccc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK  148 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  148 (153)
                           .+.+..|++|.|+|+++++++|+++|+++..+|....+++.+||+|||||.|||++..+...
T Consensus        62 -----~~~~~~hl~f~V~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~~~~a  123 (144)
T 3r6a_A           62 -----KPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHSKIEA  123 (144)
T ss_dssp             -----GGGGGCCEEEEESCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEECC---
T ss_pred             -----CCCcceEEEEEeCCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcCCcch
Confidence                 01245799999999999999999999999887754444567899999999999999876543

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.82  E-value=1.4e-19  Score=121.10  Aligned_cols=119  Identities=18%  Similarity=0.156  Sum_probs=82.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecC--------CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP--------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   73 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   73 (153)
                      |.|+|++++++||+++|||++......+        ...+  +++..+                  ++..|++.......
T Consensus        25 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------~~~~l~l~~~~~~~   84 (156)
T 3kol_A           25 LNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKV--ANFITP------------------DGTILDLFGEPELS   84 (156)
T ss_dssp             EEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSE--EEEECT------------------TSCEEEEEECTTCC
T ss_pred             EEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcE--EEEEeC------------------CCCEEEEEecCCCC
Confidence            7899999999999999999998632211        1111  233322                  14678887643322


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           74 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      ... .  .  ......+..|++|.|+  |+++++++|+++|+++...|.....++.+||+|||||.|||++...
T Consensus        85 ~~~-~--~--~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           85 PPD-P--N--PEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CSS-S--S--TTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECCC
T ss_pred             cCC-C--C--CCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEecCC
Confidence            110 0  1  0112347899999999  9999999999999999876643344557899999999999998654

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.82  E-value=6.4e-19  Score=117.19  Aligned_cols=115  Identities=37%  Similarity=0.674  Sum_probs=83.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......++..+..+++..++..               +...|+|........      .
T Consensus        14 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~l~l~~~~~~~~------~   72 (144)
T 2c21_A           14 IRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEM---------------SSTVLELTYNYGVTS------Y   72 (144)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTT---------------TSCEEEEEEETTCCC------C
T ss_pred             EEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCC---------------CceEEEEEecCCCCC------C
Confidence            6899999999999999999998765433334555666653210               136788865433211      1


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .    ...+..|++|.|+|+++++++|+++|+++..+  .+. ...+||+|||||.|||++..
T Consensus        73 ~----~~~~~~h~~f~v~d~~~~~~~l~~~G~~~~~~--~g~-~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           73 K----HDEAYGHIAIGVEDVKELVADMRKHDVPIDYE--DES-GFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             C----CCSSEEEEEEEESCHHHHHHHHHHTTCCEEEE--CSS-SSEEEEECTTSCEEEEEEHH
T ss_pred             C----CCCCceEEEEEeCCHHHHHHHHHHCCCEEecc--CCc-EEEEEEECCCCCEEEEEEcC
Confidence            1    12377899999999999999999999998876  221 23448999999999999854

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.82  E-value=2.9e-19  Score=117.70  Aligned_cols=116  Identities=19%  Similarity=0.255  Sum_probs=83.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......++..+..+++. +                   +..|+|........ +.   +
T Consensus        11 l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~-------------------~~~l~l~~~~~~~~-~~---~   66 (136)
T 2rk0_A           11 LTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G-------------------GLSIVLREHDGGGT-DL---F   66 (136)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T-------------------SCEEEEEEETTCSS-SC---C
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C-------------------CCEEEEEeCCCCcc-cC---C
Confidence            78999999999999999999987655333234444443 1                   46788865433211 11   1


Q ss_pred             CCCCCCCCCcceEEEEe---CCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      .   ....+..|++|.|   +|+++++++|+++|+++.. +.....++.+||+|||||.|||.+...
T Consensus        67 ~---~~~~g~~h~~f~v~~~~d~~~~~~~l~~~G~~~~~-~~~~~~g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           67 D---ETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTP-TQELPFGWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             C---TTSSEEEEEEEEESSHHHHHHHHHHHHHHTCCBCC-CEEETTEEEEEEECTTCCEEEEEEECT
T ss_pred             C---CCCCCcceEEEEeCCHHHHHHHHHHHHHCCCcccC-ccccCCceEEEEECCCCCEEEEEEcCC
Confidence            1   1224778999999   8999999999999999874 322333467899999999999998643

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.82  E-value=2.9e-19  Score=116.38  Aligned_cols=119  Identities=24%  Similarity=0.408  Sum_probs=82.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......++.+...+++..+                   +..+++.........  ...+
T Consensus        11 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~~~--~~~~   69 (134)
T 3rmu_A           11 IAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG-------------------NTKMELLHPLGLDSP--IAGF   69 (134)
T ss_dssp             EECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS-------------------SSEEEEEEECSTTCT--THHH
T ss_pred             EEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC-------------------CEEEEEEecCCCCch--hhhh
Confidence            7899999999999999999998765544444555666543                   467787654332211  0000


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC-CCcccc-eEEEE--ECCCCCEEEEec
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DGGKLK-GVAFI--KDPDDYWIEIFD  142 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~-~~~~~~-~~~~~--~DPdG~~iel~~  142 (153)
                      .. .....+..|++|.|+|+++++++|+++|+++..++ ..+..+ +.+|+  +|||||.|||+|
T Consensus        70 ~~-~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           70 LQ-KNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             HH-HCTTCEEEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             hh-ccCCCCceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            00 01124789999999999999999999999987654 222222 35555  899999999987

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.81  E-value=5.2e-19  Score=116.61  Aligned_cols=116  Identities=15%  Similarity=0.111  Sum_probs=80.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++|||++......+ .....+.+..+                   +..|.+........      .
T Consensus         8 l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~-------------------~~~l~l~~~~~~~~------~   61 (137)
T 3itw_A            8 LAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG-------------------GGIVMVRRTGEPYT------V   61 (137)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS-------------------SSEEEEEETTCCSS------C
T ss_pred             EEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC-------------------CeEEEEEecCCCcC------c
Confidence            7899999999999999999999775433 22223333322                   35666654321110      0


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~  145 (153)
                        ......+..|++|.|+|+++++++|+++|+++..+|....++ +.+||+|||||.|||.+...
T Consensus        62 --~~~~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           62 --SCAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             --EECCCCCCCEEEEEESCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC-
T ss_pred             --cCCCCCcEEEEEEEeCCHHHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEcC
Confidence              000111223999999999999999999999998877544433 67899999999999999753

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.81  E-value=6.5e-19  Score=116.51  Aligned_cols=113  Identities=14%  Similarity=0.188  Sum_probs=79.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++...... +..+..++++.++.                 ...|++........      .
T Consensus        17 l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~-----------------~~~l~l~~~~~~~~------~   72 (139)
T 1twu_A           17 RPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA-----------------DYHLEFTQYEGGST------A   72 (139)
T ss_dssp             EECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS-----------------SEEEEEEEETTCCC------C
T ss_pred             eEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC-----------------ceEEEEeecCCCCC------C
Confidence            569999999999999999999876432 22355566665331                 34577754322211      1


Q ss_pred             CCCCCCCCCcceEEEEeCCH---HHHHHHHHhcCCeEeecCCC--cccceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDDV---YKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di---~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .    .+.+..|++|.|+|+   ++++++|+++|+.+...+..  ...+  .||+|||||.|||++..
T Consensus        73 ~----~~~~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           73 P----VPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             C----CCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             C----CCCCccEEEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence            1    123678999999999   99999999999998843221  1122  37999999999999864

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.81  E-value=6.4e-20  Score=124.51  Aligned_cols=121  Identities=26%  Similarity=0.385  Sum_probs=86.1

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++|||++......++.+...+++..+                   +..|+|........ + ...+
T Consensus        14 l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-------------------~~~l~l~~~~~~~~-~-~~~~   72 (161)
T 3oa4_A           14 IAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG-------------------ESKIELLEPLSEES-P-IAKF   72 (161)
T ss_dssp             EECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET-------------------TEEEEEEEESSTTS-H-HHHH
T ss_pred             EEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC-------------------CeEEEEEeECCCCC-h-HHHH
Confidence            7899999999999999999998865544444555666542                   46788876433221 0 0000


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeec-CCCcccc-eEEEE--ECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLK-GVAFI--KDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~-~~~~~~~-~~~~~--~DPdG~~iel~~~~~  145 (153)
                      ..  ....|+.|++|.|+|+++++++|+++|+++..+ +..+..+ +.+|+  +|||||+|||++...
T Consensus        73 ~~--~~~~g~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           73 IQ--KRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             HH--HHCSEEEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             hh--cCCCCeEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCC
Confidence            00  012378999999999999999999999999876 5444433 45666  499999999999754

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.81  E-value=8.8e-19  Score=116.99  Aligned_cols=123  Identities=14%  Similarity=0.200  Sum_probs=83.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeec-----------CCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDF-----------PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   70 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   70 (153)
                      |.|+|++++++||++ |||++......           +......+++..++                 ++..|+|....
T Consensus        17 l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----------------g~~~l~l~~~~   78 (153)
T 1ss4_A           17 IVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD-----------------GHSRIELSRFL   78 (153)
T ss_dssp             EECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT-----------------SSCEEEEEEEE
T ss_pred             EEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCC-----------------CCcEEEEEEec
Confidence            679999999999999 99999865432           11233445555422                 13678876542


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEeccCc
Q 031774           71 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~~  145 (153)
                      .+.... ....  ......|+.|++|.|+|+++++++|+++|+++..++....+ .+.+||+|||||.|||++...
T Consensus        79 ~~~~~~-~~~~--~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           79 TPPTIA-DHRT--APVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             ESCCCC-BCTT--CCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEECC
T ss_pred             CCCCcc-cccC--CCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEeccC
Confidence            222110 0000  01123477899999999999999999999999877633222 357899999999999998653

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.81  E-value=1.2e-18  Score=113.59  Aligned_cols=112  Identities=21%  Similarity=0.267  Sum_probs=79.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++....   + ..  +++..+                   +..+++........ +    .
T Consensus        16 l~v~D~~~a~~FY~~~lG~~~~~~~---~-~~--~~~~~~-------------------~~~~~l~~~~~~~~-~----~   65 (133)
T 3ey7_A           16 LTVADIPTTTNFYEKVLGMKAVSFG---A-GR--IALEFG-------------------HQKINLHQLGNEFE-P----K   65 (133)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEET-------------------TEEEEEEETTSCCS-S----C
T ss_pred             EEECCHHHHHHHHHHccCceEEEec---C-Ce--EEEEcC-------------------CEEEEEEcCCCCcc-c----c
Confidence            7899999999999999999998762   1 12  223322                   35677765322211 0    1


Q ss_pred             CCCCCCCCCcceEEEEeCC-HHHHHHHHHhcCCeEeecCCCccc----ceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDD-VYKACERFERLGVEFAKKPDGGKL----KGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~d-i~~~~~~l~~~G~~~~~~~~~~~~----~~~~~~~DPdG~~iel~~~~~  145 (153)
                        ......+..|++|.|+| +++++++|+++|+++...|.....    .+.+||+|||||.|||++...
T Consensus        66 --~~~~~~~~~~~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           66 --AQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             --CTTCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             --CCCCCCCccEEEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence              01123477899999997 999999999999999876632211    257899999999999999753

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.80  E-value=8.1e-19  Score=115.17  Aligned_cols=108  Identities=19%  Similarity=0.222  Sum_probs=78.7

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++.....    .+.  .+..+                  ++..+.++....+        
T Consensus        18 ~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~------------------~~~~l~l~~~~~~--------   65 (132)
T 3sk2_A           18 LVYVSNVERSTDFYRFIFKKEPVFVTP----RYV--AFPSS------------------GDALFAIWSGGEE--------   65 (132)
T ss_dssp             EEECSCHHHHHHHHHHHHTCCCSEECS----SEE--EEECS------------------TTCEEEEESSSCC--------
T ss_pred             EEEECCHHHHHHHHHHHcCCeEEEcCC----CEE--EEEcC------------------CCcEEEEEeCCCC--------
Confidence            378999999999999999999886532    222  22211                  1356777543211        


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHh---cCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFER---LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~---~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      ..   ....+..|++|.|+|   +++++++|++   +|+++..+|....+++.+||+|||||.|||.++
T Consensus        66 ~~---~~~~~~~~~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           66 PV---AEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             CC---TTSCCCEEEEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             Cc---CCCCCcceEEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeC
Confidence            10   112366899999986   9999999999   999999777544445778999999999999875

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.80  E-value=7.4e-19  Score=116.76  Aligned_cols=129  Identities=17%  Similarity=0.287  Sum_probs=84.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......++.+...+++..++..   .          ..+..|+|........ + ...+
T Consensus        15 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---~----------~~~~~l~l~~~~~~~~-~-~~~~   79 (148)
T 1jc4_A           15 YACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKL---T----------EHMTQVQVMAPLNDES-T-VAKW   79 (148)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSC---C----------TTCCEEEEEEESSTTS-H-HHHH
T ss_pred             EEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCC---c----------CcceEEEEeecCCCCC-h-HHHH
Confidence            6899999999999999999998765444334455666543310   0          0025788876432211 0 0000


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEe-ecCCCcccc-eEEEE--ECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-KKPDGGKLK-GVAFI--KDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~-~~~~~~~~~-~~~~~--~DPdG~~iel~~~~~  145 (153)
                      ........|..|++|.|+|+++++++|+++|+++. ..|.....+ +.+|+  +|||||.|||++..+
T Consensus        80 ~~~~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~~  147 (148)
T 1jc4_A           80 LAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYPK  147 (148)
T ss_dssp             HHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECCC
T ss_pred             HHhCCCCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecCC
Confidence            00000013678999999999999999999999988 445433333 45566  899999999998654

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.79  E-value=2.5e-18  Score=111.72  Aligned_cols=105  Identities=10%  Similarity=0.054  Sum_probs=77.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++....    ..+  +++..+                   +..|.+......         
T Consensus        11 l~v~D~~~a~~FY~~~lG~~~~~~~----~~~--~~~~~~-------------------~~~l~l~~~~~~---------   56 (124)
T 1xrk_A           11 LTARDVAEAVEFWTDRLGFSRVFVE----DDF--AGVVRD-------------------DVTLFISAVQDQ---------   56 (124)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEC----SSE--EEEEET-------------------TEEEEEEECSCT---------
T ss_pred             EEcCCHHHHHHHHHHccCceEEecC----CCE--EEEEEC-------------------CEEEEEEcCCCC---------
Confidence            7899999999999999999998751    123  233321                   356666532111         


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhc------CC--eEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERL------GV--EFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~------G~--~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                           ...+..|++|.|+|+++++++|+++      |+  ++..+|....+++.+||+|||||.|||.+..+
T Consensus        57 -----~~~~~~~~~~~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  123 (124)
T 1xrk_A           57 -----VVPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVAEEQ  123 (124)
T ss_dssp             -----TTGGGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEEC--
T ss_pred             -----CCCCceEEEEEECCHHHHHHHHHHhcccccCCccccccCCceecCCCCEEEEECCCCCEEEEEEecC
Confidence                 0113469999999999999999999      99  88877754444577899999999999998653

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.79  E-value=6.6e-19  Score=118.99  Aligned_cols=118  Identities=21%  Similarity=0.307  Sum_probs=82.1

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCC--------------ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEE
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   67 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~   67 (153)
                      |.|+|++++++||+++|||++......+.              ....++++..                   ++..|+|+
T Consensus        25 i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------------------g~~~leL~   85 (159)
T 3gm5_A           25 IVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-------------------GPLQLELI   85 (159)
T ss_dssp             EECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-------------------TTEEEEEE
T ss_pred             EEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-------------------CCEEEEEE
Confidence            78999999999999999999876543321              2233333332                   35788887


Q ss_pred             eccCCCCCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCC--CCEEEEecc
Q 031774           68 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPD--DYWIEIFDL  143 (153)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPd--G~~iel~~~  143 (153)
                      .......  ....+...  ...|++||||.|+|+++++++|+++|+++...+... ..+.+||.|||  |++|||+|+
T Consensus        86 ~~~~~~~--~~~~~l~~--~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~-g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           86 EPDENPS--TWREFLDK--NGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFE-GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             EECSSSC--HHHHHHHH--HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEET-TEEEEEESCHHHHSSEEEEEEE
T ss_pred             EECCCCC--hhHHHhhc--CCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccC-CeeEEEEeccccCcEEEEEEec
Confidence            6532211  00000000  123789999999999999999999999998654221 24688999999  999999986

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.78  E-value=5.1e-18  Score=113.70  Aligned_cols=114  Identities=19%  Similarity=0.269  Sum_probs=78.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++....   + ..  +++..+                   +..+++........ +    .
T Consensus        29 l~v~D~~~a~~FY~~vLG~~~~~~~---~-~~--~~l~~~-------------------~~~l~l~~~~~~~~-~----~   78 (152)
T 3huh_A           29 LTVSDISTTIRFYEEVLGFSAVTFK---Q-NR--KALIFG-------------------AQKINLHQQEMEFE-P----K   78 (152)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEET---T-TE--EEEEET-------------------TEEEEEEETTBCCS-S----C
T ss_pred             EEeCCHHHHHHHHHhcCCCEEEEcc---C-Ce--EEEEeC-------------------CeEEEEeccCCcCC-C----c
Confidence            7899999999999999999998762   2 22  223322                   35677754322111 0    0


Q ss_pred             CCCCCCCCCcceEEEEeC-CHHHHHHHHHhcCCeEeecCCC--ccc--ceEEEEECCCCCEEEEeccCccc
Q 031774           82 HNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDG--GKL--KGVAFIKDPDDYWIEIFDLKTIG  147 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~-di~~~~~~l~~~G~~~~~~~~~--~~~--~~~~~~~DPdG~~iel~~~~~~~  147 (153)
                        ......+..|++|.++ |+++++++|+++|+++...|..  +..  .+.+||+|||||.|||.+..+.+
T Consensus        79 --~~~~~~g~~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~  147 (152)
T 3huh_A           79 --ASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEGH  147 (152)
T ss_dssp             --CSSCCTTCCEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC----
T ss_pred             --CcCCCCCccEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccCc
Confidence              0112347789999997 9999999999999998876632  111  25789999999999999976543

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.78  E-value=3.8e-18  Score=111.70  Aligned_cols=111  Identities=14%  Similarity=0.128  Sum_probs=73.5

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||++ |||++..... +...+  +++...                  ++..+++.....  .      
T Consensus        11 ~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~~--~~~~~~------------------~~~~l~l~~~~~--~------   60 (128)
T 3g12_A           11 TINTSHLQGMLGFYRI-IGFQFTASKV-DKGSE--VHRAVH------------------NGVEFSLYSIQN--P------   60 (128)
T ss_dssp             EEEESCHHHHHHHHHH-HTCCCEEC------CC--EEEEEE------------------TTEEEEEEECCC--C------
T ss_pred             EEEcCCHHHHHHHHHH-CCCEEecccC-CCCCE--EEEEeC------------------CCeEEEEEECCC--C------
Confidence            3789999999999999 9999876521 11122  222200                  134566632211  1      


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCe-EeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVE-FAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~-~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      .    ....+..|++|.|+|+++++++++++|++ +..+|....++..++|+|||||+|||.+..+
T Consensus        61 ~----~~~~~~~~l~f~v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           61 Q----RSQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             S----SCCCCSEEEEEEESCHHHHHHHHTTSTTCEEEEEEEECC-CEEEEEECTTCCEEEEEC---
T ss_pred             c----CCCCCceEEEEEeCCHHHHHHHHHHCCCceeccCceeCCCccEEEEECCCCCEEEEEEecc
Confidence            1    11124568999999999999999999999 7766654444444899999999999999654

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.78  E-value=2.2e-18  Score=111.65  Aligned_cols=103  Identities=12%  Similarity=0.044  Sum_probs=76.2

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++...   .+ .+  +++..+                   +..|++......       +.
T Consensus        11 l~v~D~~~a~~FY~~~LG~~~~~~---~~-~~--~~~~~~-------------------~~~l~l~~~~~~-------~~   58 (122)
T 1qto_A           11 LTAVDVPANVSFWVDTLGFEKDFG---DR-DF--AGVRRG-------------------DIRLHISRTEHQ-------IV   58 (122)
T ss_dssp             EEESSHHHHHHHHHHTTCCEEEEE---CS-SE--EEEEET-------------------TEEEEEEECSCH-------HH
T ss_pred             EEcCCHHHHHHHHHhccCcEEeeC---CC-CE--EEEEEC-------------------CEEEEEEcCCCC-------CC
Confidence            789999999999999999999865   11 22  333322                   356666532110       00


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhc------CC--eEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERL------GV--EFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~------G~--~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                             .+..|++|.|+|+++++++++++      |+  .+..+|....+++.++|+|||||.|||.++
T Consensus        59 -------~~~~~~~~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           59 -------ADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             -------HTTCEEEEEESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTSCEEEEEEC
T ss_pred             -------CCceEEEEEECCHHHHHHHHHhhccccccCccccccCCCcCCCCCcEEEEECCCCCEEEEecC
Confidence                   12369999999999999999999      99  887777544445678999999999999985

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.78  E-value=6.8e-18  Score=109.85  Aligned_cols=105  Identities=17%  Similarity=0.291  Sum_probs=76.3

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||++ |||++...    +..+  +++..+                   +..|++.......        
T Consensus         9 l~v~D~~~a~~FY~~-LG~~~~~~----~~~~--~~~~~~-------------------~~~l~l~~~~~~~--------   54 (126)
T 1ecs_A            9 LPSRDFDSTAAFYER-LGFGIVFR----DAGW--MILQRG-------------------DLMLEFFAHPGLD--------   54 (126)
T ss_dssp             EEESCHHHHHHHHHT-TTCEEEEE----CSSE--EEEEET-------------------TEEEEEEECTTCC--------
T ss_pred             EEeCCHHHHHHHHHH-CCCEEEec----CCCE--EEEEeC-------------------CEEEEEEeCCCCC--------
Confidence            789999999999998 99999865    1223  333332                   3567775432100        


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeE-------eecCCCcccc-eEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEF-------AKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~-------~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~  145 (153)
                           ...+..|++|.|+|+++++++|+++|+++       ..+|...+++ +.+||+|||||.|||++...
T Consensus        55 -----~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           55 -----PLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             -----GGGCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECCC
T ss_pred             -----CCCcceEEEEEECCHHHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecchh
Confidence                 01255799999999999999999999984       5555433333 67899999999999999765

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.78  E-value=4e-18  Score=110.74  Aligned_cols=108  Identities=14%  Similarity=0.153  Sum_probs=76.7

Q ss_pred             eee--cChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            2 FRI--KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         2 l~v--~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      |.|  +|++++++||+++|||++.......... ...++..+                   +..+++...  +..     
T Consensus        16 l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~-------------------~~~l~l~~~--~~~-----   68 (126)
T 2qqz_A           16 VAAPVGCEEEARAFYGETIGMEEIPKPEELKKR-GGCWFKCG-------------------NQEIHIGVE--QNF-----   68 (126)
T ss_dssp             EEECTTTHHHHHHHHTTTTCCEEECCCGGGGGG-CCEEEEET-------------------TEEEEEEEC--TTC-----
T ss_pred             EEcccccHHHHHHHHHhcCCCEEecCcccccCC-CceEEEeC-------------------CEEEEEEec--CCC-----
Confidence            567  8999999999999999998653211000 01223221                   356666542  110     


Q ss_pred             CCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           80 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                             .+.+..|++|.|+|+++++++|+++|+++..++.. ...+.+||+|||||.|||+++.
T Consensus        69 -------~~~~~~~~~f~v~d~~~~~~~l~~~G~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           69 -------NPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDHAR-PDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             -------CCCSSSCEEEEETTHHHHHHHHHHTTCCCEEECSS-TTEEEEEEECTTSCEEEEEEEC
T ss_pred             -------CCCCceEEEEEcCCHHHHHHHHHHcCCCccCCCCC-CCeeEEEEECCCCCEEEEEeCC
Confidence                   11367899999999999999999999999877732 2245789999999999999864

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.78  E-value=2.8e-18  Score=110.27  Aligned_cols=105  Identities=17%  Similarity=0.237  Sum_probs=73.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++....   + ..  .++..++.                ....|.+...  ..        
T Consensus        13 l~v~d~~~a~~FY~~~lG~~~~~~~---~-~~--~~~~~~~~----------------~~~~l~l~~~--~~--------   60 (119)
T 2pjs_A           13 IATPEPARAQAFYGDILGMPVAMDH---G-WI--VTHASPLE----------------AHAQVSFARE--GG--------   60 (119)
T ss_dssp             EECSCGGGGHHHHTTTTCCCEEEEC---S-SE--EEEEEEEE----------------EEEEEEEESS--SB--------
T ss_pred             EEcCCHHHHHHHHHHhcCCEEEecC---C-EE--EEEecCCC----------------CcEEEEEEcC--CC--------
Confidence            6799999999999999999988641   1 11  12222110                0234444321  10        


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  143 (153)
                           ...+..|++|.|+|+++++++|+++|+++..+|...+++ +.+||+|||||.|||+++
T Consensus        61 -----~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           61 -----SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             -----TTBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             -----CCCceeEEEEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence                 012457999999999999999999999988766443333 678999999999999985

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.77  E-value=3.1e-18  Score=114.92  Aligned_cols=112  Identities=19%  Similarity=0.250  Sum_probs=78.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++....+    .+  +++..++                  +..+.+........      .
T Consensus        12 l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~--~~~~~~~------------------g~~l~l~~~~~~~~------~   61 (148)
T 3rhe_A           12 FYVKNPAKSEEFYKNLLDTQPIESSP----TF--AMFVMKT------------------GLRLGLWAQEEIEP------K   61 (148)
T ss_dssp             EEESCHHHHHHHHHHHHTCCCSEECS----SE--EEEECTT------------------SCEEEEEEGGGCSS------C
T ss_pred             EEeCCHHHHHHHHHHHcCCEEeccCC----CE--EEEEcCC------------------CcEEEEecCCcCCc------c
Confidence            78999999999999999999887532    22  2333211                  45677654322111      0


Q ss_pred             CCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCcc
Q 031774           82 HNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  146 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  146 (153)
                         .....+..|++|.|+|   +++++++|+++|+++..+|....+++.+||+|||||.|||.+....
T Consensus        62 ---~~~~~~~~~l~f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           62 ---AHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             ---CC----CEEEEEECSCHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC--
T ss_pred             ---ccCCCCeEEEEEEcCCHHHHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcChh
Confidence               0112356799999987   9999999999999998777544445678999999999999997653

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.77  E-value=4.2e-18  Score=112.13  Aligned_cols=109  Identities=15%  Similarity=0.185  Sum_probs=74.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++|||++....+  .  +  +++..+                   +..|++........      .
T Consensus        13 l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~l~~~-------------------~~~l~l~~~~~~~~------~   61 (134)
T 3fcd_A           13 LHIPDMQEALTLFCDTLGFELKYRHS--N--Y--AYLELS-------------------GCGLRLLEEPARKI------I   61 (134)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECCCC---------
T ss_pred             EEECCHHHHHHHHHhccCcEEEEeCC--C--e--EEEEEC-------------------CEEEEEEeCCCCCc------C
Confidence            78999999999999999999987632  2  2  333332                   35677765422111      0


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcC----CeEeecCCCcccc-eEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLG----VEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G----~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~  145 (153)
                      .    ...+..|++|.|+|+++++++|+++|    +++..++....++ +.++|+|||||.|||.+...
T Consensus        62 ~----~~~~~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           62 P----DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             ----------EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             C----CCCceEEEEEEeCCHHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEccc
Confidence            0    01134699999999999999999655    4455555433344 67899999999999999754

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.76  E-value=1.6e-17  Score=110.40  Aligned_cols=104  Identities=16%  Similarity=0.231  Sum_probs=76.2

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  +..+  +++..++                 +...|++.....          
T Consensus        34 l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~--~~~~~~~-----------------~~~~l~l~~~~~----------   82 (141)
T 3ghj_A           34 VKVKNLEKSSQFYTEILGFEAGLLDS--ARRW--NFLWVSG-----------------RAGMVVLQEEKE----------   82 (141)
T ss_dssp             EEESCHHHHHHHHHHTSCCEEEEEET--TTTE--EEEEETT-----------------TTEEEEEEECCS----------
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEecC--CCcE--EEEEecC-----------------CCcEEEEeccCC----------
Confidence            78999999999999999999988753  2223  2333221                 146777764310          


Q ss_pred             CCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEec
Q 031774           82 HNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~  142 (153)
                            ..+..|++|.++  |+++++++|+++|+++..++..... ++.+||+|||||.|||++
T Consensus        83 ------~~~~~h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           83 ------NWQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             ------SCCCCEEEEEECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             ------CCCCceEEEEEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence                  125579999997  9999999999999998844332222 367899999999999986

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.76  E-value=1.7e-18  Score=116.17  Aligned_cols=115  Identities=15%  Similarity=0.182  Sum_probs=74.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++...   ++..+.  ++..++..      .....+ ........+...  +         
T Consensus        31 l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~~--~~~~~~~~------~~l~~~-~~~~~~~~l~~~--~---------   87 (148)
T 2r6u_A           31 IPFDDGDRARAFYRDAFGWAIAEI---PDMDYS--MVTTGPVG------ESGMPD-EPGYINGGMMQR--G---------   87 (148)
T ss_dssp             EEESSHHHHHHHHHHHHCCEEEEE---TTTTEE--EEECSCBC------TTSSBC-SSSCBCEEEEES--S---------
T ss_pred             EEeCCHHHHHHHHHHccCcEEEEC---CCCCEE--EEEeCCcc------eeeccc-CCcccccceeec--C---------
Confidence            789999999999999999999873   222332  33332210      000000 000111222110  0         


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcc-cceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  145 (153)
                           .+.+. |++|.|+|+++++++|+++|+++..+|.... +++.+||+|||||.|||+++..
T Consensus        88 -----~~~g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           88 -----EVTTP-VVTVDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             -----SSCSC-EEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEECC
T ss_pred             -----CCCeE-EEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecCC
Confidence                 01244 9999999999999999999999987664333 3467899999999999998653

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.76  E-value=7.5e-18  Score=112.44  Aligned_cols=109  Identities=19%  Similarity=0.352  Sum_probs=78.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++....  ++  +  +++..++                  +..|+|........      .
T Consensus        31 l~v~Dl~~a~~FY~~~LG~~~~~~~--~~--~--~~~~~~~------------------~~~l~l~~~~~~~~------~   80 (144)
T 2kjz_A           31 LYVDNPPASTQFYKALLGVDPVESS--PT--F--SLFVLAN------------------GMKLGLWSRHTVEP------K   80 (144)
T ss_dssp             EEESCHHHHHHHHHHHHTCCCSEEE--TT--E--EEEECTT------------------SCEEEEEETTSCSS------C
T ss_pred             EEeCCHHHHHHHHHHccCCEeccCC--CC--e--EEEEcCC------------------CcEEEEEeCCCCCC------c
Confidence            7899999999999999999998754  22  2  2233221                  35677754321110      1


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                         .....+..|++|.|+   |+++++++|+++|+++..+|....+++.+||+|||||.|||+++
T Consensus        81 ---~~~~~~~~hl~f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  142 (144)
T 2kjz_A           81 ---ASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAF  142 (144)
T ss_dssp             ---CCCSSSSCEEEEECSSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEE
T ss_pred             ---cCCCCCceEEEEEeCCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEec
Confidence               011236789999997   58999999999999998777544445678999999999999985

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.75  E-value=1.3e-17  Score=107.17  Aligned_cols=106  Identities=16%  Similarity=0.221  Sum_probs=73.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....    .+  +++..+                   +..+.+... ...  +    .
T Consensus        11 l~v~D~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~-------------------~~~l~l~~~-~~~--~----~   58 (118)
T 2i7r_A           11 IIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIG-------------------SHCLMLSQN-HLV--P----L   58 (118)
T ss_dssp             EECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEET-------------------TEEEEEESS-CSS--S----C
T ss_pred             EEeCCHHHHHHHHHHHhCCeeEEeCC----CE--EEEEeC-------------------CeEEEEEcC-CCC--C----c
Confidence            68999999999999999999976421    12  233322                   233433211 100  0    0


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  143 (153)
                      .   ....+ .|++|.|+|+++++++|+++|+++..+|....++ +.+||+|||||.|||++.
T Consensus        59 ~---~~~~~-~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           59 E---NFQSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             C---CCCSC-EEEEEECSCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             c---cCCCe-EEEEEEECCHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEec
Confidence            0   11123 4899999999999999999999987766433333 678999999999999875

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.75  E-value=3.1e-17  Score=107.27  Aligned_cols=110  Identities=18%  Similarity=0.218  Sum_probs=76.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEE---EEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS---LYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   78 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   78 (153)
                      |.|+|++++++||+++|||++.....  +..+.   ..++..                   ++..+++...  +..    
T Consensus        10 l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~-------------------~~~~l~l~~~--~~~----   62 (133)
T 2p7o_A           10 LIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLI-------------------AGLWICIMEG--DSL----   62 (133)
T ss_dssp             EEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEE-------------------TTEEEEEEEC--SSC----
T ss_pred             EEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEe-------------------CCEEEEEecC--CCC----
Confidence            68999999999999999999876432  11110   001111                   2356666532  110    


Q ss_pred             CCCCCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCc-ccceEEEEECCCCCEEEEeccCcc
Q 031774           79 KGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLKTI  146 (153)
Q Consensus        79 ~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~~~  146 (153)
                              ...+..|++|.|+  |+++++++|+++|+++..++... ..++.+||+|||||.|||++....
T Consensus        63 --------~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  125 (133)
T 2p7o_A           63 --------QERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLE  125 (133)
T ss_dssp             --------CCCCSCEEEEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSSCC
T ss_pred             --------CCCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCChH
Confidence                    0236789999994  99999999999999998876532 234578999999999999997653

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.75  E-value=3.1e-17  Score=109.18  Aligned_cols=118  Identities=15%  Similarity=0.159  Sum_probs=75.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++|||++.....  ...+  +++..+                   +..++|........  .+...
T Consensus        11 l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~~~--~~l~~g-------------------~~~l~l~~~~~~~~--~~~~~   65 (145)
T 2rk9_A           11 LYCFDINVSQSFFVDVLGFEVKYERP--DEEF--VYLTLD-------------------GVDVMLEGIAGKSR--KWLSG   65 (145)
T ss_dssp             EEESSHHHHHHHHHHTTCCEEEEEEG--GGTE--EEEEET-------------------TEEEEEEEC------------
T ss_pred             EEECCHHHHHHHHHhccCCEEEeecC--CCCE--EEEEcC-------------------CeEEEEEeccCCCc--ccccC
Confidence            78999999999999999999985432  1223  334332                   34566654311110  00000


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHh-cCCeEeecCCC--------cccceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFER-LGVEFAKKPDG--------GKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~--------~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      ........++ +++|.|+|+++++++|++ +|+++..+|..        ...++.++|+|||||.|||++...
T Consensus        66 ~~~~~~~~g~-~~~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           66 DLEFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             -CCSSTTTTE-EEEEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             ccccCCCCce-EEEEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            0000112354 499999999999999999 99998876642        222357889999999999998654

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.75  E-value=6.5e-17  Score=106.29  Aligned_cols=105  Identities=19%  Similarity=0.258  Sum_probs=78.2

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  . .   .++..+                   +..|++......         
T Consensus        10 l~v~D~~~a~~FY~~~lG~~~~~~~~--~-~---~~~~~~-------------------~~~l~l~~~~~~---------   55 (135)
T 1nki_A           10 LAVADLPASIAFYRDLLGFRLEARWD--Q-G---AYLELG-------------------SLWLCLSREPQY---------   55 (135)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEET--T-E---EEEEET-------------------TEEEEEEECTTC---------
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEcCC--C-c---eEEecC-------------------CEEEEEEeCCCC---------
Confidence            68999999999999999999987542  2 1   233332                   345666543110         


Q ss_pred             CCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                         .....+..|++|.|+  |+++++++|+++|+++..++..  .++.+||+|||||.|||++...
T Consensus        56 ---~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           56 ---GGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS--EGDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             ---CCCCSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCS--SSCEEEEECTTCCEEEEESCCH
T ss_pred             ---CCCCCCcceEEEEccHHHHHHHHHHHHHCCCceecCCCC--CeEEEEEECCCCCEEEEEECCc
Confidence               011236789999998  9999999999999999887654  3457899999999999998654

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.74  E-value=6.1e-17  Score=107.17  Aligned_cols=108  Identities=20%  Similarity=0.281  Sum_probs=78.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  .  .  .++..+                   +..|++.......  +    .
T Consensus        10 l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~-------------------~~~l~l~~~~~~~--~----~   58 (141)
T 1npb_A           10 LAVSDLQKSVTFWHELLGLTLHARWN--T--G--AYLTCG-------------------DLWVCLSYDEARQ--Y----V   58 (141)
T ss_dssp             EEESCHHHHHHHHHTTSCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECTTCC--C----C
T ss_pred             EEeCCHHHHHHHHHhccCCEEEeecC--C--c--EEEEEC-------------------CEEEEEEECCCCC--C----C
Confidence            78999999999999999999987642  2  1  233332                   3456665432111  0    0


Q ss_pred             CCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                         .....+..|++|.|+  |+++++++|+++|+++..++..  .++.+||+|||||.|||++...
T Consensus        59 ---~~~~~~~~hi~~~v~~~d~~~~~~~l~~~G~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~~  119 (141)
T 1npb_A           59 ---PPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS--EGASFYFLDPDGHKLELHVGSL  119 (141)
T ss_dssp             ---CGGGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCS--SSEEEEEECTTCCEEEEEECCH
T ss_pred             ---CCCCCCceEEEEEeCHHHHHHHHHHHHHCCCeEeccCCC--ceeEEEEECCCCCEEEEEECch
Confidence               011236789999997  9999999999999999887653  3467899999999999998654

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.74  E-value=1.2e-17  Score=113.14  Aligned_cols=117  Identities=19%  Similarity=0.213  Sum_probs=79.2

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  . .  .+++..+                   +..+.+............  .
T Consensus        14 l~v~Dl~~a~~FY~~vLG~~~~~~~~--~-~--~~~~~~g-------------------~~~~~l~~~~~~~~~~~~--~   67 (160)
T 3r4q_A           14 LYADDLDAAEAFYRDVFGLEMVLKLP--G-Q--LVFFKCG-------------------RQMLLLFDPQESSRADAN--N   67 (160)
T ss_dssp             EECSCHHHHHHHHHHHSCCEEEEEET--T-T--EEEEEET-------------------TEEEEEECHHHHTCCCTT--C
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEecC--C-c--EEEEeCC-------------------CEEEEEEecCCccCcccc--C
Confidence            78999999999999999999987643  1 1  2233322                   345666542211100000  0


Q ss_pred             CCCCCCCCCcceEEEEe---CCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      ........|..|++|.|   +|+++++++|+++|+++..++.....++.+||+|||||.|||+++.
T Consensus        68 ~~~~~~~~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           68 PIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             CSCCCEEEEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGG
T ss_pred             CCCcCCCcceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            00011123678999999   8999999999999999886553322356789999999999999964

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.74  E-value=2e-17  Score=105.40  Aligned_cols=101  Identities=17%  Similarity=0.258  Sum_probs=73.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++....   +..+  +++..++                  +..|.+....  ..     + 
T Consensus         9 l~v~D~~~a~~FY~~~lG~~~~~~~---~~~~--~~~~~~~------------------~~~l~l~~~~--~~-----~-   57 (113)
T 1xqa_A            9 LTVADVVAAREFLEKYFGLTCSGTR---GNAF--AVMRDND------------------GFILTLMKGK--EV-----Q-   57 (113)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEEE---TTTE--EEEECTT------------------CCEEEEEECS--SC-----C-
T ss_pred             EEeCCHHHHHHHHHHhCCCEEeccC---CCcE--EEEEcCC------------------CcEEEEEeCC--CC-----C-
Confidence            7899999999999999999998653   1122  3443321                  3456665321  10     0 


Q ss_pred             CCCCCCCCCcceEEEEe---CCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEe
Q 031774           82 HNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  141 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  141 (153)
                            ..+..|++|.|   +|+++++++|+++|+++.. |.... ++.+|++|||||.|||+
T Consensus        58 ------~~~~~~~~~~v~~~~d~~~~~~~l~~~G~~~~~-p~~~~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           58 ------YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEP-PKHAH-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             ------CCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCC-CEEC--CEEEEEEETTTEEEEEE
T ss_pred             ------CCceeEEEEEcCCHHHHHHHHHHHHHCCCEEec-CcCCC-cEEEEEECCCCcEEEEe
Confidence                  12568999999   8899999999999999764 42222 56789999999999996

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.73  E-value=8.7e-17  Score=107.36  Aligned_cols=109  Identities=20%  Similarity=0.261  Sum_probs=74.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++....   + ..  .++..+                   +..+.+........ +.   .
T Consensus        33 l~v~Dl~~a~~FY~~vLG~~~~~~~---~-~~--~~l~~g-------------------~~~l~l~~~~~~~~-~~---~   83 (147)
T 3zw5_A           33 MTVKSIKDTTMFYSKILGMEVMTFK---E-DR--KALCFG-------------------DQKFNLHEVGKEFE-PK---A   83 (147)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEET-------------------TEEEEEEETTSCCS-SC---C
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEecC---C-Cc--eEEEEC-------------------CcEEEEEEcCCCcC-cc---c
Confidence            7899999999999999999998542   2 12  122222                   34566654322111 10   0


Q ss_pred             CCCCCCCCCcceEEEEeC-CHHHHHHHHHhcCCeEeecCCC--ccc--ceEEEEECCCCCEEEEec
Q 031774           82 HNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDG--GKL--KGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~-di~~~~~~l~~~G~~~~~~~~~--~~~--~~~~~~~DPdG~~iel~~  142 (153)
                         .....|..|++|.+. |+++++++|+++|+++...|..  +..  .+.+||+|||||.|||.+
T Consensus        84 ---~~~~~g~~~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           84 ---AHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             ---SSCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             ---CCCCCCCceEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence               011236679999886 9999999999999998865522  111  246899999999999986

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.73  E-value=1.9e-17  Score=110.87  Aligned_cols=113  Identities=19%  Similarity=0.182  Sum_probs=78.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++....  +  .+  +++..+                   +..|++...........   .
T Consensus        11 l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~--~~~~~~-------------------~~~l~l~~~~~~~~~~~---~   62 (150)
T 3bqx_A           11 LGIGDLEASARFYGEGFGWAPVFRN--P--EI--IFYQMN-------------------GFVLATWLVQNLQEDVG---V   62 (150)
T ss_dssp             EEESCHHHHHHHHHHTSCCCCSEEC--S--SE--EEEECS-------------------SSEEEEEEHHHHHHHHS---S
T ss_pred             EEcCCHHHHHHHHHHhcCCEeecCC--C--CE--EEEEcC-------------------CEEEEEEeccccccccC---C
Confidence            6899999999999999999988653  1  22  233322                   35677765321100000   0


Q ss_pred             CCCCCCCCCcceEEEEe---CCHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                      ..  ....+..|++|.|   +|+++++++|+++|+++..+|....+ .+.+||+|||||.|||++..
T Consensus        63 ~~--~~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           63 AV--TSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             CC--CSSCCSCEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECT
T ss_pred             CC--CCCCCeEEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCC
Confidence            00  0123667999999   89999999999999999877644333 36789999999999999864

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.73  E-value=1.2e-16  Score=104.75  Aligned_cols=111  Identities=18%  Similarity=0.163  Sum_probs=75.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....    .+  +.+...                   +..+.+....... .    + 
T Consensus        15 l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~-------------------g~~~~l~~~~~~~-~----~-   63 (135)
T 3rri_A           15 IPARDLDEAYDFYVTKLGCKLARRYP----DR--ITLDFF-------------------GDQLVCHLSDRWD-R----E-   63 (135)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEET-------------------TEEEEEEECSCSC-S----S-
T ss_pred             EEcCCHHHHHHHHHHhcCCEeeccCC----Cc--EEEEEe-------------------CCEEEEEEcCccc-c----c-
Confidence            78999999999999999999966432    12  222211                   2235554322111 0    0 


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCC---c-cc-ceEEEEECCCCCEEEEeccCcccc
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG---G-KL-KGVAFIKDPDDYWIEIFDLKTIGK  148 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~---~-~~-~~~~~~~DPdG~~iel~~~~~~~~  148 (153)
                           ...+..|++|.++   |+++++++|+++|+++..+|..   + .. .+.+||+|||||.|||.+......
T Consensus        64 -----~~~~~~h~~~~~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~~~  133 (135)
T 3rri_A           64 -----VSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDDRM  133 (135)
T ss_dssp             -----CCSSSCEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSGGG
T ss_pred             -----CCCCCCeEEEEEcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECChhh
Confidence                 1125679999996   5999999999999998765532   2 11 246899999999999999765443

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.72  E-value=8.4e-17  Score=106.27  Aligned_cols=108  Identities=19%  Similarity=0.268  Sum_probs=76.1

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEE---EEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSL---YFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   78 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   78 (153)
                      |.|+|++++++||+++|||++......  ..+..   .++..                   ++..|++...  +..    
T Consensus        10 l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~-------------------g~~~l~l~~~--~~~----   62 (139)
T 1r9c_A           10 FIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLI-------------------GDIWVAIMQG--EKL----   62 (139)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEE-------------------TTEEEEEEEC--CCC----
T ss_pred             EEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEE-------------------CCEEEEEEeC--CCC----
Confidence            689999999999999999998865321  11100   01221                   2356777542  110    


Q ss_pred             CCCCCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCcc-cceEEEEECCCCCEEEEeccC
Q 031774           79 KGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        79 ~~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  144 (153)
                       +       ..+..|++|.|+  |+++++++|+++|+++..++.... .++.+||+|||||.|||++..
T Consensus        63 -~-------~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           63 -A-------ERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             -S-------SCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             -C-------CCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeCC
Confidence             0       136789999999  999999999999999887664322 345789999999999999854

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.72  E-value=6e-17  Score=106.84  Aligned_cols=115  Identities=20%  Similarity=0.220  Sum_probs=77.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC-CCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE-SDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~-~~~~~~~   80 (153)
                      |.|+|++++++||++ |||++.....  ...+  +.+..+                  ++..|.+....... ..+.   
T Consensus        10 l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~--~~~~~~------------------~~~~l~l~~~~~~~~~~~~---   63 (138)
T 2a4x_A           10 VVVEDMAKSLEFYRK-LGVEIPAEAD--SAPH--TEAVLD------------------GGIRLAWDTVETVRSYDPE---   63 (138)
T ss_dssp             EEESCHHHHHHHHHT-TTCCCCGGGG--GCSE--EEEECT------------------TSCEEEEEEHHHHHHHCTT---
T ss_pred             EEECCHHHHHHHHHH-cCCcEEecCC--CCce--EEEEcC------------------CCeEEEEecCccchhhCcc---
Confidence            689999999999998 9999876532  1122  222221                  13567775421100 0000   


Q ss_pred             CCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  144 (153)
                      ..  .....+..|++|.|+   |+++++++|+++|+++..+|....++ +.+||+|||||.|||++..
T Consensus        64 ~~--~~~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           64 WQ--APTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             CC--CCBSSCSEEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEEC
T ss_pred             cC--CCCCCCeEEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCC
Confidence            00  011236789999999   99999999999999998776443333 5789999999999999865

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.72  E-value=2.4e-16  Score=105.27  Aligned_cols=111  Identities=14%  Similarity=0.234  Sum_probs=77.8

Q ss_pred             eeecChhhhHHHH---hhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 031774            2 FRIKDPKVSLDFY---SRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   78 (153)
Q Consensus         2 l~v~d~~~a~~FY---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   78 (153)
                      |.|+|++++++||   +++|||++.....  . ..  .|+. +                   +..|+|.....+....  
T Consensus        26 l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~-~~--~~~~-g-------------------~~~l~l~~~~~~~~~~--   78 (146)
T 3ct8_A           26 INVDHLEESIAFWDWLLGELGYEDYQSWS--R-GK--SYKH-G-------------------KTYLVFVQTEDRFQTP--   78 (146)
T ss_dssp             EEESCHHHHHHHHHHHHHHTTCEEEEEET--T-EE--EEEE-T-------------------TEEEEEEECCGGGSCS--
T ss_pred             EEeCCHHHHHHHHHhhhhhCCCEEEEecC--C-Cc--eEec-C-------------------CeEEEEEEcCCCcccc--
Confidence            7899999999999   9999999987642  1 11  2333 1                   3567776542210000  


Q ss_pred             CCCCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEee-cCCC---cccceEEEEECCCCCEEEEecc
Q 031774           79 KGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAK-KPDG---GKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        79 ~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~-~~~~---~~~~~~~~~~DPdG~~iel~~~  143 (153)
                       +..   ....+..|++|.|+   |+++++++|+++|+.+.. .|..   +...+.+||+|||||.|||+++
T Consensus        79 -~~~---~~~~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           79 -TFH---RKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             -CCC---TTSSSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             -ccc---ccCCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence             111   11236789999999   899999999999999987 3432   2223578999999999999864

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.71  E-value=3.3e-17  Score=109.51  Aligned_cols=55  Identities=15%  Similarity=0.032  Sum_probs=46.6

Q ss_pred             CCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           89 RGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        89 ~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      .+..|++|.++   ++++++++++++|+.+..+|....+++.+||+|||||+|||+..
T Consensus        76 ~~~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~  133 (149)
T 4gym_A           76 TTEAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWM  133 (149)
T ss_dssp             CBSCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             CCeeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEE
Confidence            35579999996   58899999999999999888655556789999999999999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.70  E-value=1.8e-16  Score=119.17  Aligned_cols=111  Identities=23%  Similarity=0.406  Sum_probs=82.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecC-----------CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEec
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN   69 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~   69 (153)
                      +|.|+|++++++||+++|||++..+...+           +..+..++++.+...               ....++|...
T Consensus        32 ~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~---------------~~~~leL~~~   96 (330)
T 3zi1_A           32 VFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPED---------------DHFVAELTYN   96 (330)
T ss_dssp             EEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTT---------------TCCEEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCC---------------CccEEEEecc
Confidence            37899999999999999999998776544           344666677654321               1467888765


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           70 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .+...      +..+    .|+.||+|.|+|+   +++++++|+++...+     ...+||+|||||.|||++..
T Consensus        97 ~~~~~------~~~~----~g~~hiaf~V~d~---~~~l~~~G~~~~~~~-----~~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A           97 YGVGD------YKLG----NDFMGITLASSQA---VSNARKLEWPLTEVA-----EGVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             TTCCC------CCBC----SSEEEEEEECHHH---HHHHHHHTCCCEEEE-----TTEEEEECTTSCEEEEESSC
T ss_pred             CCCCc------cccC----CCeeEEEEECchH---HHHHHHcCCceeccC-----CceEEEECCCCCEEEEEecC
Confidence            43221      2122    3889999999987   677888999988765     22588999999999999975

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.69  E-value=9e-17  Score=106.11  Aligned_cols=110  Identities=23%  Similarity=0.223  Sum_probs=73.0

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEE-----EeccCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL-----THNWGTESD   75 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel-----~~~~~~~~~   75 (153)
                      .|.|+|++++++||+++|||++....  +  .+ . .+..                    +..+..     ...+.....
T Consensus        13 ~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~-~-~~~~--------------------g~~l~~~~~~~~~~~~~~~~   66 (141)
T 2qnt_A           13 IPFVRDINRSKSFYRDRLGLKILEDF--G--SF-V-LFET--------------------GFAIHEGRSLEETIWRTSSD   66 (141)
T ss_dssp             CCEESCHHHHHHHHHHTTCCCEEEEC--S--SE-E-EETT--------------------SCEEEEHHHHHHHHHSCCC-
T ss_pred             EEEECCHHHHHHHHHHhcCCEEEEEc--C--Cc-E-EEec--------------------cceeccCchhhhhccccCCc
Confidence            37899999999999999999998643  1  12 1 1211                    122321     011110000


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEeccC
Q 031774           76 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        76 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  144 (153)
                      .   +.    ....+..|++|.|+|+++++++|++ |+++..+|....++ +.+||+|||||.|||++..
T Consensus        67 ~---~~----~~~~~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           67 A---QE----AYGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             ----CC----CSCCSSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             c---cc----ccCCCceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            0   01    1123678999999999999999999 99988776443334 6789999999999999965

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.69  E-value=2.9e-16  Score=103.88  Aligned_cols=111  Identities=18%  Similarity=0.146  Sum_probs=74.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEec-----cCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN-----WGTESDP   76 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~-----~~~~~~~   76 (153)
                      |.|+|++++++||+++|||++......+  .+  .++..+                   +..|.+...     ..... +
T Consensus        14 l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~--~~~~~~-------------------~~~l~l~~~~~~~~~~~~~-~   69 (141)
T 2rbb_A           14 IFTRDIVAMSAFYQQVFGFQEIESIRSP--IF--RGLDTG-------------------KSCIGFNAHEAYELMQLAQ-F   69 (141)
T ss_dssp             EECSCHHHHHHHHHHHHCCEECGGGCBT--TE--EEEECS-------------------SSEEEEECTHHHHHTTCGG-G
T ss_pred             EEECCHHHHHHHHHHhcCCeeecccCCC--ce--EEeecC-------------------CEEEEEcCccccccccccc-c
Confidence            7899999999999999999987543212  22  222221                   234444321     00000 0


Q ss_pred             CCCCCCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEeccC
Q 031774           77 DFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        77 ~~~~~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                          .   .....+ .|++|.|+   |+++++++|+++|+++..+|....+ .+.+||+|||||.|||.+..
T Consensus        70 ----~---~~~~~~-~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           70 ----S---ETSGIK-FLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             ----C---CCBSCC-EEEEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             ----C---CCCCCe-EEEEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence                0   011124 49999999   5999999999999998877643333 46789999999999999854

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.67  E-value=1.1e-15  Score=115.24  Aligned_cols=111  Identities=15%  Similarity=0.186  Sum_probs=81.3

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++..... ++......|+..+..                 ...+.+.....          
T Consensus       159 l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~-----------------~~~l~~~~~~~----------  210 (339)
T 3lm4_A          159 LMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL-----------------GHEVACMRDMT----------  210 (339)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS-----------------SCSEEEEECTT----------
T ss_pred             EEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC-----------------ceEEEEeccCC----------
Confidence            78999999999999999999988765 333344566665431                 24556543111          


Q ss_pred             CCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCC-ccc-ceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG-GKL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~-~~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                          ..+.+++|++|.|+|   +++++++|+++|+++...|.. +.. ..++||+|||||+|||+...
T Consensus       211 ----~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          211 ----GGHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             ----SCCSEEEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             ----CCCCceeEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence                112368999999999   888999999999999876632 222 35799999999999998643

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.66  E-value=2.1e-15  Score=113.33  Aligned_cols=112  Identities=21%  Similarity=0.337  Sum_probs=80.8

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++.......+    .+++..++.                 ...|++...+.+        
T Consensus       164 ~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~-----------------~~~l~l~~~~~~--------  214 (330)
T 3zi1_A          164 TLAVSDLQKSLNYWCNLLGMKIYENDEEKQ----RALLGYADN-----------------QCKLELQGVKGG--------  214 (330)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEETTTT----EEEEESSTT-----------------SCEEEEEECSSC--------
T ss_pred             EEECCCHHHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCc-----------------eEEEEECCCCCC--------
Confidence            378999999999999999999998754322    245554331                 356776543321        


Q ss_pred             CCCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCC----cc-cceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG----GK-LKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~----~~-~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      ..    ...++.|++|.|+  |+++++++|+++|+++..++..    +. ..+.+||+|||||.|||++...
T Consensus       215 ~~----~~~~~~hiaf~v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~  282 (330)
T 3zi1_A          215 VD----HAAAFGRIAFSCPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEA  282 (330)
T ss_dssp             CC----CBTTCCEEEEEECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHH
T ss_pred             CC----CCCCCceEEEEEEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEecc
Confidence            11    1136679999995  7999999999999998766532    12 2357899999999999998643

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.66  E-value=1.5e-15  Score=103.67  Aligned_cols=117  Identities=14%  Similarity=0.064  Sum_probs=72.5

Q ss_pred             eeecC--hhhhHHHHhhhcCCEEeEEeecC-------CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 031774            2 FRIKD--PKVSLDFYSRVLGMSLLKRLDFP-------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   72 (153)
Q Consensus         2 l~v~d--~~~a~~FY~~~lG~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   72 (153)
                      |.|+|  +++|++||+++|||++......+       ...+....+..                   ++..|.+.... +
T Consensus        30 L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~-------------------~g~~l~l~~~~-~   89 (166)
T 1xy7_A           30 LLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNL-------------------AGSSFVVCDVS-S   89 (166)
T ss_dssp             EEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEE-------------------TTEEEEEEEGG-G
T ss_pred             EEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEE-------------------CCeEEEEeCCC-c
Confidence            77899  99999999999999988643111       11111111221                   12344443221 1


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCc--ccceEEEEECCCCCEEEEeccCc
Q 031774           73 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        73 ~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      ..  .. +...+  ...+ .|++|.|+|+++++++|+++|++ ..+|...  ++++.++|+||+||.|+|++...
T Consensus        90 ~~--~~-~~~~~--~~~g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A           90 LP--GF-STAKS--EGSG-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVELGFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             ST--TC-CCCCT--TSCC-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHTTEEEEEECTTSCEEEEEC---
T ss_pred             cc--CC-ccccC--CCCc-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcccEEEEEECCCCCEEEEEeecC
Confidence            10  00 01000  0113 49999999999999999999999 8887655  44678899999999999998653

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.65  E-value=1.7e-15  Score=111.54  Aligned_cols=110  Identities=15%  Similarity=0.189  Sum_probs=74.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++......+...+  .++..++                  .....+. . .. .       
T Consensus       170 l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~--~~~~~~~------------------~~~~~~~-~-~~-~-------  219 (282)
T 3oxh_A          170 LLTDKPDLALAFYEAVVGLTHSSMEIAAGQNY--RVLKAGD------------------AEVGGCM-E-PP-M-------  219 (282)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEC-------C--EEEEETT------------------EEEEEEE-C-CS-S-------
T ss_pred             EEcCCHHHHHHHHHHHhCCeeeeccCCCCcce--EEEEcCC------------------ccEeeec-C-CC-C-------
Confidence            78999999999999999999886431112222  2222211                  1111221 1 11 0       


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~~  145 (153)
                          ....+..|++|.|+|+++++++++++|+++..+|...++ ++.+||+|||||.|||++...
T Consensus       220 ----~~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          220 ----PGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             ----TTCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             ----CCCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecCC
Confidence                001245799999999999999999999999887754443 567899999999999999754

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.64  E-value=2.7e-15  Score=111.11  Aligned_cols=110  Identities=16%  Similarity=0.265  Sum_probs=74.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++..............|+..+..                 ...+++...  +         
T Consensus       156 l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~--~---------  207 (307)
T 1mpy_A          156 MYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK-----------------AHDVAFIHH--P---------  207 (307)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB-----------------SCSEEEEEC--S---------
T ss_pred             EEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC-----------------ceeEEEecC--C---------
Confidence            789999999999999999999876432221112234443211                 223444311  1         


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCC-c-ccceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG-G-KLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~-~-~~~~~~~~~DPdG~~iel~~~~  144 (153)
                           .+++..|++|.|+   |+++++++|+++|+++...|.. + ..++.+||+|||||.|||.+..
T Consensus       208 -----~~g~~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  270 (307)
T 1mpy_A          208 -----EKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  270 (307)
T ss_dssp             -----SSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             -----CCCcceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecc
Confidence                 0113689999999   5677889999999998765532 1 1245789999999999999964

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.64  E-value=4.1e-15  Score=112.04  Aligned_cols=118  Identities=19%  Similarity=0.198  Sum_probs=80.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecC-CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|++++++||+++|||++..+.... +.+...++++....     .          .+..|+++......  +    
T Consensus        14 l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g-----~----------~g~~l~l~~~~~~~--~----   72 (335)
T 3oaj_A           14 AIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGG-----K----------PGTIITFFPWAGAR--Q----   72 (335)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTC-----C----------TTSEEEEEECTTCC--B----
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCC-----C----------CCcEEEEEECCCCC--C----
Confidence            7899999999999999999998875322 12222233332110     0          13577776532211  0    


Q ss_pred             CCCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      .   .....++.|+||.|+  |+++++++|+++|+++..  ........+||+|||||.|||++...
T Consensus        73 ~---~~~~~~~~hiaf~V~~~dl~~~~~rL~~~Gv~~~~--~~~~g~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           73 G---VIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK--IERFGEQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             C---BCCBSEEEEEEEEECTTCHHHHHHHHHHTTCCCEE--EEETTEEEEEEECTTSCEEEEEECSC
T ss_pred             C---CCCCCceEEEEEEecHHHHHHHHHHHHhCcceeee--eccCCcEEEEEECCCCCEEEEEEeCC
Confidence            0   111246889999999  999999999999998875  11222357899999999999999753

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.64  E-value=4.5e-15  Score=111.00  Aligned_cols=108  Identities=17%  Similarity=0.240  Sum_probs=77.3

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++|| ++|||++......+.+.....|+..+..                 .+.+.+...  +         
T Consensus       158 l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~-----------------~~~~~~~~~--~---------  208 (323)
T 1f1u_A          158 QVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT-----------------VHDTALTGG--N---------  208 (323)
T ss_dssp             EEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS-----------------SCSEEEEES--S---------
T ss_pred             EecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC-----------------cccEEEeCC--C---------
Confidence            7899999999999 9999999876554333334556654321                 233444321  1         


Q ss_pred             CCCCCCCCCcceEEEEeCCHHH---HHHHHHhcCC--eEeecC-CCcc-cceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYK---ACERFERLGV--EFAKKP-DGGK-LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~--~~~~~~-~~~~-~~~~~~~~DPdG~~iel~~~~  144 (153)
                           . .+++|++|.|+|+++   ++++|+++|+  ++...| ..+. ...++||+|||||.|||....
T Consensus       209 -----~-~~~~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          209 -----G-PRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             -----B-SEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             -----C-CCceEEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence                 0 167899999999998   9999999999  887544 2222 234689999999999998643

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.64  E-value=3.5e-15  Score=110.21  Aligned_cols=110  Identities=21%  Similarity=0.285  Sum_probs=75.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCC--------c-cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------M-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   72 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   72 (153)
                      |.|+|++++++||+++|||++......+.        . .....|+..++.                 ...+.+...  +
T Consensus       148 l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~~--~  208 (300)
T 2zyq_A          148 LSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPR-----------------HHSLAFLPM--P  208 (300)
T ss_dssp             EECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSB-----------------SCSEEEESS--C
T ss_pred             EEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCC-----------------ccEEEEecC--C
Confidence            78999999999999999999976432221        1 123344443211                 234555321  1


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEeCCHHH---HHHHHHhcCCeEeecCCCc-c-cceEEEEECCCCCEEEEeccC
Q 031774           73 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDGG-K-LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        73 ~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~~-~-~~~~~~~~DPdG~~iel~~~~  144 (153)
                                    ...+..|++|.|+|+++   ++++|+++|+++...|... . ..+.+||+|||||+|||++..
T Consensus       209 --------------~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          209 --------------TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             --------------CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             --------------CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence                          01367899999998655   5999999999998765321 1 145789999999999999754

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.63  E-value=4.7e-15  Score=110.07  Aligned_cols=109  Identities=17%  Similarity=0.162  Sum_probs=76.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCC-ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|++++++||+++|||++......+. ......|+..++.                 ...+.+...  +        
T Consensus       157 l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~--~--------  209 (309)
T 3hpy_A          157 LYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK-----------------VHDIAFVEY--P--------  209 (309)
T ss_dssp             EEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS-----------------SCSEEEEEC--S--------
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC-----------------ceeEEEecC--C--------
Confidence            78999999999999999999987655332 2234556654321                 223444321  1        


Q ss_pred             CCCCCCCCCCcceEEEEeCCHH---HHHHHHHhcCCeEeecCCC-cc-cceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~---~~~~~l~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iel~~~  143 (153)
                            .+.+++|+||.|+|++   +++++|+++|+++...|.. +. ...++||+|||||+|||...
T Consensus       210 ------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          210 ------EKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             ------STTEEEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             ------CCCceeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence                  0125899999999865   4678999999998766532 22 13578999999999999875

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.63  E-value=2.7e-15  Score=100.09  Aligned_cols=50  Identities=10%  Similarity=0.093  Sum_probs=42.4

Q ss_pred             EE-EeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEeccC
Q 031774           95 GI-TVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        95 ~f-~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  144 (153)
                      +| .|+|+++++++|+++|+++..+|...+++ +.+||+|||||.|||.++.
T Consensus        94 ~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           94 GFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             EEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence            65 99999999999999999988777544444 5789999999999999864

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.61  E-value=5e-15  Score=109.01  Aligned_cols=113  Identities=15%  Similarity=0.138  Sum_probs=75.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCc-cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|++++++||+++|||++......... .+..  +..++                  .....+.......  +    
T Consensus        38 l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~--~~~~g------------------~~~~~l~~~~~~~--~----   91 (282)
T 3oxh_A           38 LQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSM--ATLNG------------------EAVAAIAPMPPGA--P----   91 (282)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEEC-----CCEEE--EEETT------------------EEEEEEEECCSCC-------
T ss_pred             EecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEE--EEeCC------------------eeeEeeccCCCCC--C----
Confidence            789999999999999999998865331110 2322  22111                  1222332211110  0    


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcc-cceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  145 (153)
                           .......+++|.|+|+++++++++++|+++..+|.... .++.++|+||+||.|||++...
T Consensus        92 -----~~~~~~~~~~~~v~d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A           92 -----EGMPPIWNTYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             -------CCCEEEEEEECSCHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEESS
T ss_pred             -----CCCCCcEEEEEEeCCHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEccc
Confidence                 00124468999999999999999999999987764322 3567899999999999999764

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.61  E-value=7.7e-15  Score=108.21  Aligned_cols=109  Identities=18%  Similarity=0.239  Sum_probs=75.2

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeec---CCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDF---PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   78 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   78 (153)
                      |.|+|++++++||+++|||++......   ++......|+..++.                 ...+.+..  .+      
T Consensus       148 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~l~l~~--~~------  202 (297)
T 1lgt_A          148 RCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNER-----------------HHTLAIAA--FP------  202 (297)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEEC--CC------
T ss_pred             EecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCC-----------------cceEEEEc--CC------
Confidence            789999999999999999999765322   111123345543221                 23455532  11      


Q ss_pred             CCCCCCCCCCCCcceEEEEeCCHHHHH---HHHHhcCCeEeecCCCccc--ceEEEEECCCCCEEEEeccC
Q 031774           79 KGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        79 ~~~~~~~~~~~g~~hl~f~v~di~~~~---~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~  144 (153)
                              .+.+..|++|.|+|++++.   ++ +++|+++...|.....  ...+||+|||||+|||++..
T Consensus       203 --------~~~~~~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          203 --------LPKRIHHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             --------CSSSEEEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             --------CCCCceEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence                    0136789999999987776   89 9999999876643222  23589999999999999864

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.59  E-value=2.8e-14  Score=107.28  Aligned_cols=119  Identities=15%  Similarity=0.159  Sum_probs=78.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecC-CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|+++|++||+++|||++....... +......++..+..     .          ....|.+.......  .    
T Consensus        36 l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g-----~----------~~~~l~l~~~~~~~--~----   94 (338)
T 1zsw_A           36 MVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTG-----S----------PGTELSFFEIPLVG--R----   94 (338)
T ss_dssp             EEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTC-----C----------TTSEEEEEECTTCC--B----
T ss_pred             EEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCC-----C----------CCCEEEEEECCCCc--c----
Confidence            7899999999999999999998764211 11122223322110     0          03456665421111  0    


Q ss_pred             CCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      .   .....+..|++|.|+   |+++++++|+++|+++..++.. ...+.+||+|||||.|||++...
T Consensus        95 ~---~~~~~~~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~~-~G~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A           95 T---YRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTY-ANRPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             C---BCCBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEE-TTEEEEEEECTTCCEEEEEECTT
T ss_pred             C---cCCCCCeeeEEEEcCCHHHHHHHHHHHHHCCCcccccccc-CCcEEEEEECCCCCEEEEEEcCC
Confidence            0   011236789999998   6999999999999998865431 11257899999999999999754

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.59  E-value=3.4e-14  Score=104.38  Aligned_cols=110  Identities=12%  Similarity=0.069  Sum_probs=74.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++|||++......+ ..+  ..+..++..               ....+.+..  .+..       
T Consensus       189 l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~--~~~~~~~~~---------------~~~~~~~~~--~~~~-------  241 (301)
T 2zw5_A          189 LPVRDVAATLRLVEAALGARTAFAIGDP-PEF--AEAALTPWS---------------AGPRFRLAA--VPGP-------  241 (301)
T ss_dssp             EEESCHHHHHHHHHHHSCCEEEEEEETT-EEE--EEEESSSSS---------------SSSEEEEEE--CCCS-------
T ss_pred             EEeCCHHHHHHHHHHhcCCeEeeecCCC-ccE--EEEEcCCCc---------------ccccccccc--CCCc-------
Confidence            6789999999999999999998644322 122  233332100               002222211  1100       


Q ss_pred             CCCCCCCCCcceEEEEeC-CHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~-di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  143 (153)
                           ......+++|.|+ |+++++++++++|+++..+|...+++ +.++|+|||||.|||.++
T Consensus       242 -----~~~~~~~~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          242 -----GPVEPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             -----SCCCCCEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             -----CCCCceEEEEEcCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence                 0113358999999 99999999999999998877544443 678999999999999875

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.59  E-value=1.3e-13  Score=90.96  Aligned_cols=112  Identities=6%  Similarity=0.054  Sum_probs=74.7

Q ss_pred             eeec--ChhhhHHHHhhhc-CCEEeEEeecCC------ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 031774            2 FRIK--DPKVSLDFYSRVL-GMSLLKRLDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   72 (153)
Q Consensus         2 l~v~--d~~~a~~FY~~~l-G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   72 (153)
                      |.++  |+++|++||+++| |+++......++      .....+.+..+                   +..+.+.... .
T Consensus        11 L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~-------------------g~~~~~~~~~-~   70 (136)
T 1u7i_A           11 LMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG-------------------DQSVHCIDSH-V   70 (136)
T ss_dssp             EEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEEEEES-S
T ss_pred             EEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEEC-------------------CEEEEEECCC-C
Confidence            5677  9999999999999 999976332221      12222222221                   2233332211 0


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEeccC
Q 031774           73 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        73 ~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  144 (153)
                      .+  .   ..     ......++|.|+|   +++++++|. +|+++..+|.+.+++ +.++|+||+||.|+|..+.
T Consensus        71 ~~--~---~~-----~~~~~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~~  135 (136)
T 1u7i_A           71 RH--A---FD-----FTPAFSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLAG  135 (136)
T ss_dssp             CC--S---CC-----CCTTEEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEECC
T ss_pred             CC--C---CC-----CCCceEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEecC
Confidence            00  0   10     0123489999999   999999999 999999988776665 6788999999999998753

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.58  E-value=1.1e-13  Score=92.83  Aligned_cols=113  Identities=14%  Similarity=0.088  Sum_probs=74.6

Q ss_pred             eeec-ChhhhHHHHhhhcCCEEeEEeecCC------------ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEe
Q 031774            2 FRIK-DPKVSLDFYSRVLGMSLLKRLDFPE------------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH   68 (153)
Q Consensus         2 l~v~-d~~~a~~FY~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~   68 (153)
                      |.|+ |+++|++||+++||+++.......+            .....+.+..                   ++..|.+..
T Consensus         9 L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~-------------------~~~~l~~~d   69 (149)
T 1u6l_A            9 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVV-------------------GSFALMASD   69 (149)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEE-------------------TTEEEEEEE
T ss_pred             EEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEE-------------------CCEEEEEEc
Confidence            6788 9999999999999999986543222            1111111221                   123333322


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEeccC
Q 031774           69 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  144 (153)
                      . .+..  .   .    ....| .+++|.|+|   +++++++|+ +|+++..+|...+++ +.++|+||+|+.|+|.+..
T Consensus        70 ~-~~~~--~---~----~~~~g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           70 N-HPAY--P---Y----EGIKG-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             C-CTTS--C---C----CCCCS-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESC
T ss_pred             C-CCcc--C---C----CCCCc-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEEEEec
Confidence            1 1100  0   0    01123 589999998   889999985 899999888766665 5788999999999999854


Q ss_pred             c
Q 031774          145 T  145 (153)
Q Consensus       145 ~  145 (153)
                      .
T Consensus       138 ~  138 (149)
T 1u6l_A          138 D  138 (149)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.58  E-value=8.7e-15  Score=108.92  Aligned_cols=103  Identities=15%  Similarity=0.272  Sum_probs=75.2

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  +   ...|+..+..                 ...+.+...  +         
T Consensus       147 l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~-----------------~~~l~l~~~--~---------  193 (310)
T 3b59_A          147 LHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSA-----------------HHRIAILPG--P---------  193 (310)
T ss_dssp             EEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSB-----------------SCSEEEEES--S---------
T ss_pred             EecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCC-----------------cceEEEECC--C---------
Confidence            78999999999999999999987542  1   1344544221                 234554321  0         


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHH---HHHHHhcCCeEeecCCC-cc-cceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKA---CERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~---~~~l~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iel~~~~  144 (153)
                             .|+.|++|.|+|++++   +++|+++|+++...|.. +. ...++||+|||||.||+.+..
T Consensus       194 -------~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  254 (310)
T 3b59_A          194 -------PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSEL  254 (310)
T ss_dssp             -------SEEEEEEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             -------CceEEEEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCc
Confidence                   2678999999998777   99999999998866532 11 235789999999999999864

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.58  E-value=2.8e-14  Score=105.85  Aligned_cols=106  Identities=20%  Similarity=0.320  Sum_probs=75.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeec-cCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY-EDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|++++++||+++|||++.....  +..   +++.. ++.                .+..+.+...  .        
T Consensus        14 l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~---~~l~~~~~~----------------~~~~l~l~~~--~--------   62 (309)
T 3hpy_A           14 VRVLNLEEGIHFYRNVLGLVETGRDD--QGR---VYFKCWDER----------------DHSCYIIREA--D--------   62 (309)
T ss_dssp             EEESSHHHHHHHHHHTSCCEEEEECT--TSC---EEEECTTCC----------------BSCSEEEEEC--S--------
T ss_pred             EEcCCHHHHHHHHHhccCCEEEEEcC--CCe---EEEEeccCC----------------CceEEEEEeC--C--------
Confidence            78999999999999999999987632  111   22322 210                0133444321  1        


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCC--cccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                             ..+..|++|.|++   +++++++|+++|+++...+..  ...++.+||+|||||.|||++...
T Consensus        63 -------~~~~~h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           63 -------TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             -------SCEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             -------CCceeEEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccc
Confidence                   1267899999986   999999999999999876642  223457899999999999998653

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.58  E-value=1e-14  Score=108.04  Aligned_cols=106  Identities=19%  Similarity=0.304  Sum_probs=74.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  ...   +++...+..               ....+.+.  ...         
T Consensus        13 l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~~---~~l~~~~~~---------------~~~~l~~~--~~~---------   61 (307)
T 1mpy_A           13 LRVLDMSKALEHYVELLGLIEMDRDD--QGR---VYLKAWTEV---------------DKFSLVLR--EAD---------   61 (307)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEECT--TSC---EEEECTTCC---------------BSCSEEEE--ECS---------
T ss_pred             EEeCCHHHHHHHHHHccCCEEEeecC--CCc---EEEEecCCC---------------CceEEEEc--cCC---------
Confidence            78999999999999999999987542  111   233322100               01122221  111         


Q ss_pred             CCCCCCCCCcceEEEEe---CCHHHHHHHHHhcCCeEeecCCC--cccceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                            ..+..|++|.|   +|+++++++|+++|+++...+..  ...++.++|+|||||.|||++..
T Consensus        62 ------~~~~~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (307)
T 1mpy_A           62 ------EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADK  123 (307)
T ss_dssp             ------SCEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             ------CCCcceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcc
Confidence                  02668999999   78999999999999999877642  12345788999999999999964

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.58  E-value=1.5e-14  Score=107.21  Aligned_cols=109  Identities=14%  Similarity=0.142  Sum_probs=72.1

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecC--Cc-cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   78 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   78 (153)
                      |.|+|++++++|| ++|||++......+  ++ .....|+..+..                 ...+.+...  +      
T Consensus       152 l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~~--~------  205 (305)
T 2wl9_A          152 IREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR-----------------HHSLAFGVG--P------  205 (305)
T ss_dssp             ECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS-----------------SCSEEECCS--C------
T ss_pred             EECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC-----------------ceEEEEecC--C------
Confidence            6799999999999 99999987532211  11 112233433211                 122333210  0      


Q ss_pred             CCCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCC-cc-cceEEEEECCCCCEEEEeccC
Q 031774           79 KGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        79 ~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iel~~~~  144 (153)
                              ...++.|++|.|+|   +++++++|+++|+++...|.. +. ...++||+|||||+|||....
T Consensus       206 --------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          206 --------MDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             --------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             --------CCCCceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence                    01367899999998   667889999999998866522 11 134689999999999999854

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.58  E-value=2.2e-14  Score=105.55  Aligned_cols=109  Identities=17%  Similarity=0.195  Sum_probs=73.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecC--Cc-cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   78 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   78 (153)
                      |.|+|++++++||+++|||++......+  ++ .....|+..+..                 ...+.+...  +.     
T Consensus       148 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~~--~~-----  203 (292)
T 1kw3_B          148 RCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR-----------------HHTIALAAF--PI-----  203 (292)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEECC--SC-----
T ss_pred             EecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC-----------------cceEEEecC--CC-----
Confidence            7899999999999999999998653321  11 123344443211                 233444321  10     


Q ss_pred             CCCCCCCCCCCCcceEEEEeCCHHH---HHHHHHhcCCeEeecCCCccc--ceEEEEECCCCC-EEEEeccC
Q 031774           79 KGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDY-WIEIFDLK  144 (153)
Q Consensus        79 ~~~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~-~iel~~~~  144 (153)
                               +.+.+|++|.|+|+++   ++++|+ +|+++...|.....  ...+||+||||| .|||.+..
T Consensus       204 ---------~~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          204 ---------PKRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             ---------SSSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             ---------CCceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence                     1367899999998654   678999 99998876632211  346799999999 99999854

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.57  E-value=2.7e-14  Score=105.66  Aligned_cols=109  Identities=15%  Similarity=0.152  Sum_probs=72.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecC--Cc-cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF   78 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~   78 (153)
                      |.|+|++++++|| ++|||++......+  ++ .....|+..++.                 ...+.+..  .+      
T Consensus       155 l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~--~~------  208 (302)
T 2ehz_A          155 VRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR-----------------DHSIAFGA--MP------  208 (302)
T ss_dssp             ECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB-----------------SCSEEECS--CC------
T ss_pred             EEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC-----------------CcEEEEec--CC------
Confidence            6799999999999 99999987543211  11 123344443211                 12233321  10      


Q ss_pred             CCCCCCCCCCCCcceEEEEeCCHH---HHHHHHHhcCCeEeecCCC-cc-cceEEEEECCCCCEEEEeccC
Q 031774           79 KGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        79 ~~~~~~~~~~~g~~hl~f~v~di~---~~~~~l~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iel~~~~  144 (153)
                              .+.+.+|++|.|+|++   +++++|+++|+++...|.. +. ..+.+||+|||||.|||+...
T Consensus       209 --------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          209 --------AAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             --------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             --------CCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence                    1136789999999876   4678999999999866532 12 134689999999999998753

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.55  E-value=1.1e-13  Score=104.20  Aligned_cols=104  Identities=20%  Similarity=0.292  Sum_probs=74.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeec-cCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY-EDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|++++++||+++|||++.....   .  . +++.. ++.                ....+.+...  +        
T Consensus        17 l~v~Dl~~a~~FY~~vLG~~~~~~~~---~--~-~~l~~~~~~----------------~~~~l~l~~~--~--------   64 (339)
T 3lm4_A           17 LFSPKPQETLDFFTKFLGMYVTHREG---Q--S-VYLRGYEDP----------------YPWSLKITEA--P--------   64 (339)
T ss_dssp             EEESSHHHHHHHHHHTTCCEEEEEET---T--E-EEEECTTCS----------------SSCSEEEEEC--S--------
T ss_pred             EEeCCHHHHHHHHHhcCCCEEEEecC---C--E-EEEEecCCC----------------CceEEEEeeC--C--------
Confidence            78999999999999999999987632   1  1 22322 110                0233334221  1        


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                             ..++.|++|.|+|   +++++++|+++|+++...+.....++.++|+|||||.|||+...
T Consensus        65 -------~~g~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~  124 (339)
T 3lm4_A           65 -------EAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWEA  124 (339)
T ss_dssp             -------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECCB
T ss_pred             -------CCCcceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEee
Confidence                   1267899999997   99999999999999987764322345789999999999998753

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.55  E-value=7.3e-14  Score=105.22  Aligned_cols=110  Identities=11%  Similarity=0.144  Sum_probs=75.0

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++.....    .. ..|.. ++.                 ...|++.......  .    
T Consensus       158 ~L~v~Dle~t~~FY~~vLG~~~~~~~~----~~-~~~~~-g~~-----------------~~~l~l~~~~~~~--~----  208 (335)
T 3oaj_A          158 TLLSEQPDKTADLLENIMGLERVGKEG----DF-VRYRS-AGD-----------------IGNVIDLKLTPIG--R----  208 (335)
T ss_dssp             EEECSSHHHHHHHHHHTSCCEEEEEET----TE-EEEEC-SSS-----------------SSCEEEEESSCCC--B----
T ss_pred             EEEECCHHHHHHHHHHHhCCEEeeccC----CE-EEEEe-CCC-----------------CcEEEEEeCCCCC--c----
Confidence            378999999999999999999997632    12 22222 211                 3456665432111  0    


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                         +....++++|+||.|+|   +++++++|+++|+.+......+ +...+||+||+||.|||...
T Consensus       209 ---~~~g~g~~~HiAf~v~d~~~l~~~~~~L~~~G~~~~~~~~r~-~~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          209 ---GQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPVRDRN-YFNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             ---CBCSBTEEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECS-SSEEEEEECTTSCEEEEEES
T ss_pred             ---CCCCCcceEEEEEEcCCHHHHHHHHHHHHHCCCCccccccCC-cEEEEEEECCCCcEEEEEeC
Confidence               01123468999999998   6679999999999865333222 23468999999999999985

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.55  E-value=2.8e-14  Score=105.18  Aligned_cols=104  Identities=15%  Similarity=0.268  Sum_probs=74.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  + .   +++..++.                 ...|.+..  .+         
T Consensus        10 l~v~Dl~~s~~FY~~~LG~~~~~~~~--~-~---~~~~~~~~-----------------~~~l~~~~--~~---------   55 (297)
T 1lgt_A           10 FAVSDVAAWRSFLTQKLGLMEAGTTD--N-G---DLFRIDSR-----------------AWRIAVQQ--GE---------   55 (297)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEET--T-E---EEEESSSB-----------------SCSEEEEE--CT---------
T ss_pred             EEcCCHHHHHHHHHHccCCEEeecCC--C-e---EEEEeCCC-----------------cEEEEEec--CC---------
Confidence            78999999999999999999987632  2 1   23333221                 12233321  11         


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCC----cccceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                            ..+..|++|.|+   |+++++++|+++|+++...+..    ...++.+||+|||||.|||++...
T Consensus        56 ------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           56 ------VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             ------TCEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             ------CCCccEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECcc
Confidence                  126789999999   8999999999999998866532    122457899999999999998654

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.55  E-value=5.7e-14  Score=105.57  Aligned_cols=110  Identities=10%  Similarity=0.085  Sum_probs=73.3

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeec-cCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY-EDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|++++++||+++|||++.....    .+ ..|... ++..                ...+.+..  ....      
T Consensus       186 l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~-~~~~~~~~g~~----------------~~~~~~~~--~~~~------  236 (338)
T 1zsw_A          186 LTVRRLDKMASTLTEIFGYTEVSRND----QE-AIFQSIKGEAF----------------GEIVVKYL--DGPT------  236 (338)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEECS----SE-EEEESSTTCST----------------TCEEEEEC--CSSB------
T ss_pred             EEECCHHHHHHHHHHhcCCEEEeecC----Ce-EEEEecCCCCc----------------eEEEEecc--CCCC------
Confidence            68999999999999999999987542    22 222221 1100                12333321  1100      


Q ss_pred             CCCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .   .....++.|++|.|+   |+++++++|+++|+++. ++......+.+||+|||||.|||++..
T Consensus       237 ~---~~~~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          237 E---KPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             C---BCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             C---CCCCCceEEEEEEeCCHHHHHHHHHHHHHCCCcee-eeeecCceEEEEEECCCCCEEEEEEcC
Confidence            0   011236789999999   69999999999999985 443223345789999999999999853

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.54  E-value=2.8e-14  Score=104.99  Aligned_cols=104  Identities=18%  Similarity=0.333  Sum_probs=74.3

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  . .   +++..++.                 ...+.+..  +.         
T Consensus        10 l~v~Dl~~a~~FY~~~lG~~~~~~~~--~-~---~~l~~~~~-----------------~~~l~~~~--~~---------   55 (292)
T 1kw3_B           10 FAVKDVPAWDHFLTKSVGLMAAGSAG--D-A---ALYRADQR-----------------AWRIAVQP--GE---------   55 (292)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEET--T-E---EEEESSSB-----------------SCSEEEEE--CT---------
T ss_pred             EEeCCHHHHHHHHHhcCCCEEeecCC--C-e---EEEEcCCc-----------------eEEEEEcc--CC---------
Confidence            78999999999999999999987532  2 1   23333221                 12232221  11         


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCC----cccceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                            ..+..|++|.|+   |+++++++|+++|+++...+..    ...++.+||+|||||.|||++...
T Consensus        56 ------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           56 ------LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             ------TCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             ------CCCccEEEEEECCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECcc
Confidence                  125689999998   8999999999999998876632    122457889999999999998654

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.53  E-value=1.1e-13  Score=104.87  Aligned_cols=126  Identities=18%  Similarity=0.276  Sum_probs=82.4

Q ss_pred             Ceeec--ChhhhHHHHhhhcCCEEeEEee--cCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 031774            1 MFRIK--DPKVSLDFYSRVLGMSLLKRLD--FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   76 (153)
Q Consensus         1 ~l~v~--d~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   76 (153)
                      +|.|+  |++++++||+++|||+......  .+...+...++..++                 +...|++..........
T Consensus       163 ~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~-----------------g~~~l~l~~~~~~~~~~  225 (357)
T 2r5v_A          163 AICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS-----------------GAVTLTLIEPDRNADPG  225 (357)
T ss_dssp             EEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT-----------------SCCEEEEEEECTTSBCC
T ss_pred             EEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC-----------------CCEEEEEeeecCCCCCc
Confidence            36789  9999999999999999986532  222233444554322                 14578876542211000


Q ss_pred             CCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCc-------------cc-----ceEEEEECCCCCEE
Q 031774           77 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-------------KL-----KGVAFIKDPDDYWI  138 (153)
Q Consensus        77 ~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~-------------~~-----~~~~~~~DPdG~~i  138 (153)
                      ....+... ....|++||||.|+|+++++++|+++|+++...|...             ..     ...+|++||||++|
T Consensus       226 ~~~~~~~~-~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~ll  304 (357)
T 2r5v_A          226 QIDEFLKD-HQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLF  304 (357)
T ss_dssp             HHHHHHHH-HTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEE
T ss_pred             hhHHHHHh-cCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEE
Confidence            00000000 0124889999999999999999999999988776210             00     13689999999999


Q ss_pred             EEeccC
Q 031774          139 EIFDLK  144 (153)
Q Consensus       139 el~~~~  144 (153)
                      ||++..
T Consensus       305 qi~t~~  310 (357)
T 2r5v_A          305 QIFTAS  310 (357)
T ss_dssp             EEEBCC
T ss_pred             EEEccC
Confidence            999854

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.53  E-value=8e-14  Score=101.16  Aligned_cols=104  Identities=14%  Similarity=0.226  Sum_probs=74.5

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++.....    ..  +++..+                   +..|.+......        
T Consensus        31 ~L~V~Dle~s~~FY~~vLGl~~~~~~~----~~--~~L~~g-------------------~~~l~l~~~~~~--------   77 (252)
T 3pkv_A           31 TLYTAELDRMLAFYTNMLGAQHVHEQA----DA--FTIQLG-------------------VSQIQFRAAADG--------   77 (252)
T ss_dssp             EEEESCHHHHHHHHHHHHCGGGEEECS----SE--EEEEET-------------------TEEEEEEECCTT--------
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEccC----CE--EEEEeC-------------------CEEEEEEECCCC--------
Confidence            378999999999999999999987632    12  344432                   345666432110        


Q ss_pred             CCCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeec-CCC-----cccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKK-PDG-----GKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~-~~~-----~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                             ..+..|++|.++  ++++++++|+++ +++..+ +..     ....+.+||+|||||.|||++...
T Consensus        78 -------~~~~~hiaf~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           78 -------TKPFYHIAINIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             -------CCCCCEEEEEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             -------CCCeeEEEEEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence                   125679999986  699999999999 988652 211     222457999999999999999654

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.51  E-value=4.6e-14  Score=104.18  Aligned_cols=102  Identities=19%  Similarity=0.277  Sum_probs=72.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeE-EeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLK-RLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|++++++||+++|||++.. ..   +..   +++..++.                 ...+.+..  ..        
T Consensus        11 l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~---~~~~~~~~-----------------~~~l~l~~--~~--------   57 (300)
T 2zyq_A           11 IEATDMAAWREYGLKVLGMVEGKGAP---EGA---LYLRMDDF-----------------PARLVVVP--GE--------   57 (300)
T ss_dssp             EEESCHHHHHHHHHHTSCCEECSSCC---SSC---EEEESSSS-----------------SCSEEEEE--CS--------
T ss_pred             EEeCCHHHHHHHHHHccCCEEeccCC---CCe---EEEEeCCC-----------------cEEEEEec--CC--------
Confidence            78999999999999999999876 32   111   23333221                 12344432  11        


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCc----ccceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iel~~~  143 (153)
                             ..+..|++|.|++   +++++++|+++|+++...+...    ..++.+||+|||||.|||++.
T Consensus        58 -------~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           58 -------HDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             -------SCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             -------CCCcceEEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence                   1267899999975   8999999999999987665321    224578899999999999997

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.50  E-value=2.8e-13  Score=101.24  Aligned_cols=105  Identities=19%  Similarity=0.261  Sum_probs=75.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeec-cCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY-EDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |.|+|++++++||+++|||++....   + .  .+++.. +..                ....|.+...  .        
T Consensus        23 l~v~Dl~~a~~FY~~vlG~~~~~~~---~-~--~~~l~~~~~~----------------~~~~l~l~~~--~--------   70 (323)
T 1f1u_A           23 IVVTDLAKSREFYVDVLGLHVTEED---E-N--TIYLRSLEEF----------------IHHNLVLRQG--P--------   70 (323)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEEC---S-S--EEEEECTTCC----------------SSCSEEEEEC--S--------
T ss_pred             EEeCCHHHHHHHHHhCCCCEEeeec---C-C--EEEEEecCCC----------------CcEEEEEEEC--C--------
Confidence            6799999999999999999998753   1 1  133432 210                0234444321  1        


Q ss_pred             CCCCCCCCCCcceEEEEe---CCHHHHHHHHHhcCCeEeecCC-Cc-ccceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD-GG-KLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~-~~-~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                             ..+..|++|.|   +|+++++++|+++|+++...+. .. ..++.++|+||+||.|||++...
T Consensus        71 -------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~  133 (323)
T 1f1u_A           71 -------IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  133 (323)
T ss_dssp             -------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             -------CCCeeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecc
Confidence                   12568999999   7899999999999999987765 21 22457889999999999998654

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.48  E-value=2.4e-13  Score=101.17  Aligned_cols=106  Identities=16%  Similarity=0.174  Sum_probs=75.4

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....    ..  +++..++..               ....|.+...  .         
T Consensus        14 l~v~Dl~~a~~FY~~vlG~~~~~~~~----~~--~~l~~~~~~---------------~~~~l~l~~~--~---------   61 (310)
T 3b59_A           14 YGVKDFDAEKAFYADVWGLEPVGEDA----NN--AWFKAQGAD---------------EHHVVQLRRA--D---------   61 (310)
T ss_dssp             EEESSHHHHHHHHHHTTCCEEEEECS----SE--EEEECTTSC---------------CSCSEEEEEC--S---------
T ss_pred             EecCCHHHHHHHHHhCcCCEEeeecC----Ce--EEEEECCCC---------------CCEEEEEEEC--C---------
Confidence            67999999999999999999986531    12  333332200               0244555421  1         


Q ss_pred             CCCCCCCCCcceEEEEe---CCHHHHHHHHHhcCCeEeecCCC---cccceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG---GKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~---~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                            ..+..|++|.|   +|+++++++|+++|+++...+..   ...++.++|+||+||.|||++...
T Consensus        62 ------~~~~~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  125 (310)
T 3b59_A           62 ------ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVA  125 (310)
T ss_dssp             ------SCEEEEEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             ------CCCeeEEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEccc
Confidence                  12567999999   68999999999999998876632   222457889999999999998653

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.48  E-value=1e-13  Score=102.68  Aligned_cols=103  Identities=18%  Similarity=0.329  Sum_probs=73.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  + ..  .++..++.                 ...|.+...  .         
T Consensus        12 l~v~Dl~~a~~FY~~~LG~~~~~~~~--~-~~--~~~~~~~~-----------------~~~l~l~~~--~---------   58 (305)
T 2wl9_A           12 LSVSNLDAWRDYAAGIMGMQVVDDGE--D-DR--IYLRMDRW-----------------HHRIVLHAD--G---------   58 (305)
T ss_dssp             EECSCHHHHHHHHTTTTCCEEECCSC--T-TE--EEEECSSB-----------------SCSEEEECS--S---------
T ss_pred             EEeCCHHHHHHHHHhccCCEEeeccC--C-Ce--EEEEeCCC-----------------eEEEEEEEC--C---------
Confidence            67999999999999999999876211  2 21  23333220                 234555321  0         


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCC----cccceEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iel~~~  143 (153)
                            ..+..|++|.|+   |+++++++|+++|+++...|..    ...++.+||+|||||.|||++.
T Consensus        59 ------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           59 ------SDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             ------CCEEEEEEEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             ------CCCeEEEEEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence                  126789999997   6999999999999998876632    1124578899999999999986

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.47  E-value=1.3e-13  Score=102.09  Aligned_cols=103  Identities=18%  Similarity=0.254  Sum_probs=72.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  ...   .++..+..                 ...|.+..  ..         
T Consensus        15 l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~---~~~~~~~~-----------------~~~l~l~~--~~---------   61 (302)
T 2ehz_A           15 ISVKDPDAWKSFATDMLGLQVLDEGE--KDR---FYLRMDYW-----------------HHRIVVHH--NG---------   61 (302)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEECCSC--SSE---EEEESSSB-----------------SCSEEEES--SC---------
T ss_pred             EEeCCHHHHHHHHHhcCCCEEEeccC--Ccc---eEEEeCCC-----------------ceEEEEec--CC---------
Confidence            68999999999999999999986421  111   23332211                 23344421  11         


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCc----ccceEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iel~~~  143 (153)
                            ..+..|++|.|+   |+++++++|+++|+++...|...    ..++.+||+|||||.|||++.
T Consensus        62 ------~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           62 ------QDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             ------CSEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             ------CCCeeEEEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence                  125689999995   69999999999999988766321    124578899999999999985

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.47  E-value=8e-13  Score=100.61  Aligned_cols=104  Identities=22%  Similarity=0.284  Sum_probs=73.9

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++..+..   .   .+++...+..               ....+.+..  ++         
T Consensus        23 l~V~DLe~s~~FY~dvLGL~~~~~~~---~---~~~lr~~~~~---------------~~~~l~l~~--~~---------   70 (365)
T 4ghg_A           23 LVVTDLAKSRNFYVDVLGLHVSYEDE---N---QIYLRSFEEF---------------IHHNLVLTK--GP---------   70 (365)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEECS---S---EEEEECTTCC---------------SSCSEEEEE--CS---------
T ss_pred             EEeCCHHHHHHHHhhCCCCEEEEEcC---C---EEEEEeCCCC---------------cceEEEecc--CC---------
Confidence            78999999999999999999987632   1   2344432210               023344432  11         


Q ss_pred             CCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCc--ccceEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iel~~~  143 (153)
                            ..++.|++|.+.+   +++++++|+++|+.+...+...  ..+..++|.|||||.|||+..
T Consensus        71 ------~~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~  131 (365)
T 4ghg_A           71 ------VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFE  131 (365)
T ss_dssp             ------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             ------CCCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEE
Confidence                  1277899999975   8899999999999998755321  223578999999999999864

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.41  E-value=9e-12  Score=82.59  Aligned_cols=106  Identities=7%  Similarity=0.020  Sum_probs=69.5

Q ss_pred             cChhhhHHHHhhhc-CCEEeEEeecCC------ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 031774            5 KDPKVSLDFYSRVL-GMSLLKRLDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   77 (153)
Q Consensus         5 ~d~~~a~~FY~~~l-G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   77 (153)
                      .|+++|++||+++| |+++.......+      .....+.+..+                   +..+-+.. ..+.    
T Consensus        14 ~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~-------------------~~~~m~~d-~~~~----   69 (139)
T 1tsj_A           14 NQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN-------------------GQVFMAID-ANSG----   69 (139)
T ss_dssp             SCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET-------------------TEEEEEEC---------
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEEC-------------------CEEEEEEC-CCCC----
Confidence            49999999999999 999986433322      12222222221                   12222211 1110    


Q ss_pred             CCCCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEeccCc
Q 031774           78 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        78 ~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~  145 (153)
                         .  +    .. ..|++.++|   +++++++|. +|+++..++.+..++ +..+|+||+|+.|+|.....
T Consensus        70 ---~--~----~~-~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~~~  130 (139)
T 1tsj_A           70 ---T--E----LP-ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALPEE  130 (139)
T ss_dssp             ------------C-CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEECC-
T ss_pred             ---C--C----ce-EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeeccc
Confidence               0  0    12 578899987   788999998 799999988766665 58899999999999998654

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.39  E-value=1.3e-11  Score=84.53  Aligned_cols=111  Identities=14%  Similarity=0.105  Sum_probs=75.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCC--------------ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEE
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   67 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~   67 (153)
                      |.++|.++|++||+++||+++.......+              +....+.+..+                   +..|-+.
T Consensus        31 L~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~-------------------g~~lm~~   91 (172)
T 3l20_A           31 IAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL-------------------GVKVLCS   91 (172)
T ss_dssp             EEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET-------------------TEEEEEE
T ss_pred             EEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC-------------------CEEEEEE
Confidence            56789999999999999999876654321              12233333332                   3444443


Q ss_pred             eccCCCCCCCCCCCCCCCCCCCCcceEEEEe--------CCHHHHHHHHHhcC-CeEeecCCCcccc-eEEEEECCCCCE
Q 031774           68 HNWGTESDPDFKGYHNGNSEPRGFGHIGITV--------DDVYKACERFERLG-VEFAKKPDGGKLK-GVAFIKDPDDYW  137 (153)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v--------~di~~~~~~l~~~G-~~~~~~~~~~~~~-~~~~~~DPdG~~  137 (153)
                      ...+..       ...     .+...+++.+        +|+++++++|.+.| +++..++...+++ +..+|+||+|+.
T Consensus        92 D~~g~~-------~~~-----~~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~  159 (172)
T 3l20_A           92 DSFGRA-------DKI-----NNGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVR  159 (172)
T ss_dssp             ECTTCC-------CCC-----CSSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCE
T ss_pred             CCCCCC-------CCC-----CCcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCE
Confidence            321110       111     1224677777        57999999999999 7999888666554 578899999999


Q ss_pred             EEEecc
Q 031774          138 IEIFDL  143 (153)
Q Consensus       138 iel~~~  143 (153)
                      |+|...
T Consensus       160 W~i~~~  165 (172)
T 3l20_A          160 WMLHGQ  165 (172)
T ss_dssp             EEEEEE
T ss_pred             EEEEeC
Confidence            999764

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.37  E-value=3.5e-11  Score=79.63  Aligned_cols=110  Identities=5%  Similarity=0.059  Sum_probs=72.6

Q ss_pred             eeec-ChhhhHHHHhhhcC-CEEeEEeecC------CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCC
Q 031774            2 FRIK-DPKVSLDFYSRVLG-MSLLKRLDFP------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE   73 (153)
Q Consensus         2 l~v~-d~~~a~~FY~~~lG-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~   73 (153)
                      |.++ |.++|++||+++|| .++......+      ++....+.+..+                   +..|-+..... .
T Consensus        15 L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~-------------------g~~lm~~d~~~-~   74 (138)
T 3oms_A           15 LMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN-------------------GQEFMCIDSYV-N   74 (138)
T ss_dssp             EEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEEEECSS-C
T ss_pred             EEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC-------------------CEEEEEEcCCC-C
Confidence            5677 89999999999999 5665443322      222333334332                   23444432111 1


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEec
Q 031774           74 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  142 (153)
                      .     .+..     +....+++.++|   +++++++|. +|.++..+|...+++ +..+++||+|+.|.|.-
T Consensus        75 ~-----~~~~-----~~~~~l~l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           75 H-----NFTF-----TPAMSLYVTCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             C-----SCCC-----CTTSCEEEEESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEE
T ss_pred             C-----CCCC-----CCCEEEEEEcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEe
Confidence            0     0111     123589999999   999999995 688999888766665 67889999999999964

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.36  E-value=9.7e-12  Score=94.63  Aligned_cols=109  Identities=17%  Similarity=0.241  Sum_probs=75.1

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|++++.+||++ |||++......+.......|+.++..                 ++.+.+...  +        
T Consensus       157 ~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~-----------------hH~la~~~~--~--------  208 (365)
T 4ghg_A          157 NQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT-----------------VHDTALTGG--N--------  208 (365)
T ss_dssp             EEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS-----------------SCSEEEEES--S--------
T ss_pred             EEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc-----------------ccceeeecC--C--------
Confidence            3789999999999965 99999877665555556677776442                 344444321  1        


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHH---HHHHHHhcCCeE--eecC-CCccc-ceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEF--AKKP-DGGKL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~---~~~~l~~~G~~~--~~~~-~~~~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                             ..+++|++|+|+|+++   ++++|.++|+..  ...| +.+.. ..++||+||+||+||+....
T Consensus       209 -------~~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g  272 (365)
T 4ghg_A          209 -------GPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQD  272 (365)
T ss_dssp             -------BSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             -------CCceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCC
Confidence                   1278999999998765   567888888743  3333 11111 24789999999999997754

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.34  E-value=1.5e-11  Score=94.01  Aligned_cols=122  Identities=18%  Similarity=0.135  Sum_probs=80.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecC-C-ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC--
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP-E-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD--   77 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~--   77 (153)
                      |.|+|++++++||+++|||++..+.... . ......+++.+                   ...|++.....+.....  
T Consensus        28 i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g-------------------~~~l~l~~~~~~~~~~~~~   88 (381)
T 1t47_A           28 FAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-------------------SARFVLTSVIKPATPWGHF   88 (381)
T ss_dssp             EECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEESSCCSHHHHH
T ss_pred             EEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC-------------------CEEEEEecCCCCCCcchhH
Confidence            6899999999999999999999864221 1 11233333321                   45677764322211000  


Q ss_pred             CCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCC---ccc-ceEEEEECCCCCEEEEeccC
Q 031774           78 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GKL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        78 ~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~---~~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                      ...+..  ....++.|++|.|+|+++++++|+++|+++..+|..   +.. ...++|+||+|+.++|+++.
T Consensus        89 ~~~~~~--~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           89 LADHVA--EHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             HHHHHH--HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             HHHHHH--hcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            000000  001378999999999999999999999999977642   222 23677899999999999864

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.32  E-value=7.8e-12  Score=95.60  Aligned_cols=126  Identities=16%  Similarity=0.236  Sum_probs=80.4

Q ss_pred             eeec--ChhhhHHHHhhhcCCEEeEEee-----cCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 031774            2 FRIK--DPKVSLDFYSRVLGMSLLKRLD-----FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   74 (153)
Q Consensus         2 l~v~--d~~~a~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   74 (153)
                      |.|+  |++++++||+++|||+......     .+...+...++..+.                 +...|++........
T Consensus       190 l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~-----------------g~v~i~l~~~~~~~~  252 (381)
T 1t47_A          190 GNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT-----------------LKVKFPINEPALAKK  252 (381)
T ss_dssp             EECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT-----------------SCSEEEEEEECCSSS
T ss_pred             EeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCC-----------------CcEEEEEecCCcCCC
Confidence            6788  9999999999999999986532     122233334443221                 135677755421111


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc------------------ceEEEEECCCCC
Q 031774           75 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL------------------KGVAFIKDPDDY  136 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~------------------~~~~~~~DPdG~  136 (153)
                      ......+.. .....|++||||.|+|+++++++|+++|++++..|.....                  ..++|-+||+|.
T Consensus       253 ~s~~~~~l~-~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~  331 (381)
T 1t47_A          253 KSQIDEYLE-FYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGY  331 (381)
T ss_dssp             CCHHHHHHH-HHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCE
T ss_pred             ccHHHHHHH-HhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCe
Confidence            000000100 0012489999999999999999999999999877632110                  125777899999


Q ss_pred             EEEEeccCc
Q 031774          137 WIEIFDLKT  145 (153)
Q Consensus       137 ~iel~~~~~  145 (153)
                      ++.|++..-
T Consensus       332 llqift~~~  340 (381)
T 1t47_A          332 LLQIFTKPV  340 (381)
T ss_dssp             EEEEEBCCS
T ss_pred             EEEEeccCC
Confidence            998887554

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.28  E-value=1.3e-11  Score=93.38  Aligned_cols=118  Identities=16%  Similarity=0.143  Sum_probs=78.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.......+..+  ..+..+                   ...+.+.....+....  ..+
T Consensus        11 ~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g~~--~~~~~g-------------------~~~l~l~~~~~~~~~~--~~~   67 (357)
T 2r5v_A           11 MYVENLEVAAFSWVDKYAFAVAGTSRSADHRS--IALRQG-------------------QVTLVLTEPTSDRHPA--AAY   67 (357)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEEETTEEE--EEEEET-------------------TEEEEEEEESSTTSHH--HHH
T ss_pred             EEECCHHHHHHHHHHcCCCeEEEEEcCCCceE--EEEEeC-------------------CEEEEEeCCCCCCCHH--HHH
Confidence            67999999999999999999987654322222  222221                   3556665421221100  000


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCC--cccceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      ..  ....++.|++|.|+|+++++++++++|+++...|..  .......+|+||+|..++|+++.
T Consensus        68 ~~--~~g~g~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           68 LQ--THGDGVADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             HH--HHSSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             HH--hcCCeEEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            00  011378999999999999999999999999876632  11123678899999999999864

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.22  E-value=8e-11  Score=91.21  Aligned_cols=125  Identities=19%  Similarity=0.182  Sum_probs=80.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecC--CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC-----
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP--EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES-----   74 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~-----   74 (153)
                      |.|+|+++|++||+++|||++......+  ...+..++++.+                   ...++|.....+..     
T Consensus        31 i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g-------------------~~~l~L~~~~~~~~~~~~~   91 (424)
T 1sqd_A           31 FWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG-------------------DLRFLFTAPYSPSLSAGEI   91 (424)
T ss_dssp             EECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET-------------------TEEEEEEEECCGGGTTTCC
T ss_pred             EEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC-------------------CEEEEEecCCCCccccccc
Confidence            7899999999999999999998775322  112333444421                   45677764422210     


Q ss_pred             ----CCCCCCCCCC------CCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcc-cceEEEEECCCCCEEEEecc
Q 031774           75 ----DPDFKGYHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        75 ----~~~~~~~~~~------~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~  143 (153)
                          ..+...+..+      .....|+.|+||.|+|+++++++++++|+++..+|.... ......+++|.|++++|+++
T Consensus        92 ~~~~~~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~  171 (424)
T 1sqd_A           92 KPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSY  171 (424)
T ss_dssp             GGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEE
T ss_pred             ccccccccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEec
Confidence                0000001000      001148899999999999999999999999987763211 12356677888888888876


Q ss_pred             Cc
Q 031774          144 KT  145 (153)
Q Consensus       144 ~~  145 (153)
                      ..
T Consensus       172 ~g  173 (424)
T 1sqd_A          172 KA  173 (424)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.19  E-value=1.1e-10  Score=88.53  Aligned_cols=124  Identities=14%  Similarity=0.237  Sum_probs=77.5

Q ss_pred             Ceeec--ChhhhHHHHhhhcCCEEeEEeecCC--ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEec-cCCCCC
Q 031774            1 MFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN-WGTESD   75 (153)
Q Consensus         1 ~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~-~~~~~~   75 (153)
                      +|.|+  |++++++||+++|||+.......++  .++....+..                 ..+...|+|... ..... 
T Consensus       163 ~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~-----------------~~g~~~i~L~~~~~~~~~-  224 (357)
T 1cjx_A          163 THNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSA-----------------PDGMIRIPLNEESSKGAG-  224 (357)
T ss_dssp             CEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEEC-----------------TTSSCEEEEEEECTTCCS-
T ss_pred             EEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEEC-----------------CCCCEEEEEeeecCCCCC-
Confidence            47889  9999999999999999987654221  1121111111                 112467888654 11111 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEee-cCC---------Ccccc---------eEEEEEC----
Q 031774           76 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK-KPD---------GGKLK---------GVAFIKD----  132 (153)
Q Consensus        76 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~-~~~---------~~~~~---------~~~~~~D----  132 (153)
                      + ...+.. .....|++|+||.|+|+++++++|+++|+++.. .|.         .+..+         .+++.+|    
T Consensus       225 ~-~~~~~~-~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~  302 (357)
T 1cjx_A          225 Q-IEEFLM-QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEG  302 (357)
T ss_dssp             H-HHHHHH-HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETT
T ss_pred             h-HHHhHH-hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCC
Confidence            0 000000 001247899999999999999999999999987 551         01111         1467788    


Q ss_pred             CCCCEEEEeccC
Q 031774          133 PDDYWIEIFDLK  144 (153)
Q Consensus       133 PdG~~iel~~~~  144 (153)
                      |+|++++|++..
T Consensus       303 ~~g~llqift~~  314 (357)
T 1cjx_A          303 DKRLLLQIFSET  314 (357)
T ss_dssp             EEEEEEEEEBCC
T ss_pred             CCCeEEEEeccC
Confidence            888888888754

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.15  E-value=9.8e-11  Score=90.70  Aligned_cols=100  Identities=12%  Similarity=0.293  Sum_probs=64.5

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCC-----ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccC--CC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG--TE   73 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~--~~   73 (153)
                      +|.|+|++++++||+++|||+.......++     .++...++..+.                 +...|++.....  ..
T Consensus       207 ~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~-----------------g~~~l~l~e~~~~~~~  269 (424)
T 1sqd_A          207 VGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND-----------------EMVLLPINEPVHGTKR  269 (424)
T ss_dssp             EEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT-----------------SCSEEEEEEECCC---
T ss_pred             EEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCC-----------------CcEEEEEecccccCCC
Confidence            368999999999999999999988764322     123333444321                 246777765421  11


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHh----cCCeEeecC
Q 031774           74 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFER----LGVEFAKKP  119 (153)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~----~G~~~~~~~  119 (153)
                      .++ ..++... ....|++||||.|+|+.+++++|++    +|++++..|
T Consensus       270 ~s~-i~~fl~~-~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          270 KSQ-IQTYLEH-NEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             CCH-HHHHHHH-HTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             cch-hhhhhhh-cCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            110 0011100 0123899999999999999999999    899999765

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.14  E-value=1.1e-10  Score=90.22  Aligned_cols=101  Identities=12%  Similarity=0.263  Sum_probs=64.5

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCc-----cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC-CC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-----KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT-ES   74 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~-~~   74 (153)
                      +|.|+|++++++||+++|||+.......++.     ++...++..+.                 +...|++...... ..
T Consensus       204 ~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~-----------------g~i~l~l~e~~~~~~~  266 (418)
T 1sp8_A          204 VGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS-----------------ENVLLPLNEPVHGTKR  266 (418)
T ss_dssp             EEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS-----------------SCCEEEEEEECCCSSS
T ss_pred             EEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCC-----------------CcEEEEEeecccccCC
Confidence            3679999999999999999999887643221     23334444321                 2456777654211 11


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHh----cCCeEeecC
Q 031774           75 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFER----LGVEFAKKP  119 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~----~G~~~~~~~  119 (153)
                      ......+... ....|++||||.|+|+++++++|++    +|++++..|
T Consensus       267 ~s~i~~fl~~-~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          267 RSQIQTFLDH-HGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             CCHHHHHHHH-HTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             Ccchhhhhhc-cCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            0000011000 0123899999999999999999999    799999765

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.10  E-value=1.1e-09  Score=78.01  Aligned_cols=111  Identities=17%  Similarity=0.190  Sum_probs=68.9

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|.+++++||+++|||++..+..      ..+.++.++.                 ...|.+-.  .|....    
T Consensus        15 ~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~-----------------~~~L~lEE--sp~~~~----   65 (244)
T 3e0r_A           15 TLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG-----------------LEKLVLEE--APSMRT----   65 (244)
T ss_dssp             EEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC-----------------CEEEEEEE--CCTTTC----
T ss_pred             EEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC-----------------cceEEEEe--CCCccc----
Confidence            378999999999999999999998643      2344554321                 22343432  121100    


Q ss_pred             CCCCCCCCCCcceE---EEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCccc
Q 031774           81 YHNGNSEPRGFGHI---GITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIG  147 (153)
Q Consensus        81 ~~~~~~~~~g~~hl---~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  147 (153)
                           ....|.-|+   ++-+++-+++..-|.. +..+.. +..+..++.+|+.||+||.|||.......
T Consensus        66 -----~~~~Glkh~a~i~i~vp~~~el~~lL~~-~~~~~~-~~~gdhgyA~yl~dPEGn~ieiyae~d~~  128 (244)
T 3e0r_A           66 -----RKVEGRKKLARLIVKVENPLEIEGILSK-TDSIHR-LYKGQNGYAFEIFSPEDDLILIHAEDDIA  128 (244)
T ss_dssp             -----BCCCSSCSEEEEEEEESSHHHHHHHHTT-CSCCSE-EEECSSSEEEEEECTTCCEEEEECCSCGG
T ss_pred             -----ccccccceeeeEEEEcCCHHHHHHHHhc-cccccc-ccccCCcEEEEEECCCCCeEEEEEcCCHH
Confidence                 011255666   5999987776655555 443321 11123355799999999999999865443

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.08  E-value=8.7e-10  Score=85.24  Aligned_cols=124  Identities=14%  Similarity=0.090  Sum_probs=78.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCC--ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC---CC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES---DP   76 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~---~~   76 (153)
                      |.|+|++++++||++.|||++......+.  .....++++.+                   ...|+|.....+..   ..
T Consensus        37 i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G-------------------~~~l~L~~~~~~~~~~~~~   97 (418)
T 1sp8_A           37 LWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG-------------------SLSFLFTAPYAHGADAATA   97 (418)
T ss_dssp             EECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEECCSSCCGGGC
T ss_pred             EEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC-------------------CEEEEEecCCCCccccccc
Confidence            67999999999999999999987643221  12333444332                   45677764422210   00


Q ss_pred             CCCCCCCC------CCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEeccC
Q 031774           77 DFKGYHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        77 ~~~~~~~~------~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                      +...+..+      ...+.|+.|+||.|+|+++++++++++|+++..+|..... ....++++|.|..++|+++.
T Consensus        98 p~~~~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A           98 ALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             SSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             ccccccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEccC
Confidence            00000000      0001388999999999999999999999999887732111 22455678888888887765

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.04  E-value=3.8e-09  Score=80.98  Aligned_cols=121  Identities=12%  Similarity=0.107  Sum_probs=80.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCc--cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      |.|+|++++++||+++|||+.......+..  ....+++..                   ++..++|..+..+...+ ..
T Consensus        17 i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~-------------------G~i~~~L~~p~~p~s~~-~a   76 (393)
T 3isq_A           17 FWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQ-------------------GKIVFVLSSALNPWNKE-MG   76 (393)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEE-------------------TTEEEEEEEESSTTCHH-HH
T ss_pred             EEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEec-------------------CCEEEEEecCCCCCchH-HH
Confidence            679999999999999999999986543211  122223332                   24667775432221100 00


Q ss_pred             CCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCc---cc-ceEEEEECCCCCEEEEeccC
Q 031774           80 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG---KL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~---~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                      .+....  ..|..|+||+|+|+++++++++++|++++.+|...   .. .....+++|.|..+.|+++.
T Consensus        77 ~fl~~h--G~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~  143 (393)
T 3isq_A           77 DHLVKH--GDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKM  143 (393)
T ss_dssp             HHHHHH--CSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             HHHHhc--CCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccc
Confidence            010001  13789999999999999999999999999888422   11 23566899999999999853

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.00  E-value=1.2e-09  Score=83.81  Aligned_cols=100  Identities=15%  Similarity=0.231  Sum_probs=65.4

Q ss_pred             eeecC--hhhhHHHHhhhcCCEEeEEee-----cCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 031774            2 FRIKD--PKVSLDFYSRVLGMSLLKRLD-----FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   74 (153)
Q Consensus         2 l~v~d--~~~a~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   74 (153)
                      +.|+|  ++++++||+++|||+......     .+..++....+..++                 +...|+|........
T Consensus       179 i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~-----------------g~v~i~L~ep~~~~~  241 (393)
T 3isq_A          179 GNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE-----------------ESIKMPINEPAPGKK  241 (393)
T ss_dssp             EECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT-----------------SSCEEEEEEEECCSB
T ss_pred             EecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC-----------------CCEEEEEecCCCCCC
Confidence            56777  999999999999999987643     112233333443321                 246788876432111


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC
Q 031774           75 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  119 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  119 (153)
                      +.....+...+ ...|++||||.|+|+.+++++|+++|++++..|
T Consensus       242 ~s~I~~fL~~~-~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          242 KSQIQEYVDYN-GGAGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             CCHHHHHHHHH-TSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCHHHHHHHHc-CCCCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence            11000111000 123899999999999999999999999999876

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=98.90  E-value=9.6e-09  Score=77.74  Aligned_cols=113  Identities=14%  Similarity=0.113  Sum_probs=72.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++|| +.|||++..+...  ..+  .++..+                   ...+.+..  .+.. +. ..+
T Consensus        18 ~~V~D~~~~~~fy-~~LGf~~~~~~~~--~~~--~l~~~g-------------------~~~l~l~~--~~~~-~~-~~~   69 (357)
T 1cjx_A           18 FASPTPGTLEPIF-EIMGFTKVATHRS--KNV--HLYRQG-------------------EINLILNN--EPNS-IA-SYF   69 (357)
T ss_dssp             EECSSTTSSHHHH-HHTTCEEEEEESS--SSE--EEEEET-------------------TEEEEEEC--CSSS-HH-HHH
T ss_pred             EEeCCHHHHHHHH-HHCCCEEEEEeCC--eeE--EEEecC-------------------CEEEEEEC--CCCc-hh-hhh
Confidence            6799999999999 8999999876431  122  122211                   34454432  1111 00 000


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      ..  ....++.|++|.|+|+++++++++++|+++...+..........+++|+|..++|+++.
T Consensus        70 ~~--~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           70 AA--EHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             HH--HHSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             hh--hcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCC
Confidence            00  01137899999999999999999999999887663211112456788888888888764

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.58  E-value=2.4e-06  Score=57.78  Aligned_cols=102  Identities=12%  Similarity=0.043  Sum_probs=65.3

Q ss_pred             eeec-ChhhhHHHHhhhc-CCEEeEEeecC-------CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC
Q 031774            2 FRIK-DPKVSLDFYSRVL-GMSLLKRLDFP-------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT   72 (153)
Q Consensus         2 l~v~-d~~~a~~FY~~~l-G~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~   72 (153)
                      |..+ |.++|++||+++| |.++......+       ++....+.+..+                   +..|-+... .+
T Consensus        11 L~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~-------------------g~~~m~~d~-~p   70 (163)
T 1u69_A           11 LWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM-------------------GIPCLGLNG-GP   70 (163)
T ss_dssp             EEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET-------------------TEEEEEEEC-CT
T ss_pred             EEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC-------------------CEEEEEECC-CC
Confidence            4566 9999999999999 99888543321       122333333332                   233333321 11


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           73 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        73 ~~~~~~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .       +..     .....|++.++|   +++++++|.+.|.++.      .+   ..++||.|+.|.|..+.
T Consensus        71 ~-------~~~-----~~~~sl~v~~~d~~e~d~~~~~L~~~Gg~v~------~~---G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           71 A-------FRH-----SEAFSFQVATDDQAETDRLWNAIVDNGGEES------AC---GWCRDKWGISWQITPRV  124 (163)
T ss_dssp             T-------CCC-----CTTEEEEEEESSHHHHHHHHHHHHHTTCEEC------ST---TEEECTTSCEEEEEEHH
T ss_pred             C-------cCC-----CCceEEEEEeCCHHHHHHHHHHHHhCCCEEE------EE---EEEECCCCCEEEEEeEc
Confidence            1       110     122488899987   7888999988888887      11   36899999999998753

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.04  E-value=1.6e-05  Score=66.30  Aligned_cols=52  Identities=15%  Similarity=0.159  Sum_probs=43.0

Q ss_pred             ceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           92 GHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        92 ~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .|++|.+.|++++.++|.+.+.++...|..-. ...+|+.||+||+|+|.+..
T Consensus        96 ~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~-~~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           96 SNIAFKSSSLSKLVKLLKDGGHPVQQSPNEIS-PFEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             CEEEEEESCHHHHHHHHHTTTCCCBCSSSSCS-CEEECCSSCCEEEECC-CCS
T ss_pred             ceEEEEeCCHHHHHHHHHhcCCccccCCCcCC-CceEEeECCCCCEEEEeccC
Confidence            49999999999999999999998887774311 23689999999999998865

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=96.05  E-value=0.016  Score=41.37  Aligned_cols=48  Identities=15%  Similarity=0.143  Sum_probs=35.1

Q ss_pred             CCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEec
Q 031774           89 RGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        89 ~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  142 (153)
                      -|+..+-|.++  |++++.++|++.|..+ ..-     ...+.+.||.|+.|-|.+
T Consensus       194 ~gLe~l~~~v~~~dl~~l~~~L~~~g~~i-dkk-----~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          194 WDLSMLKFLVNELDIASLRQKFESTEYFI-PKS-----EKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             SSEEEEEEEESSCCHHHHHHHTTTSCEEC-CTT-----CCEEEEECTTSCEEEEEE
T ss_pred             cCceEEEEEeCHHHHHHHHHHHHhCCceE-ccc-----CCEEEEECCCCCEEEEEE
Confidence            36778888886  5889999999987622 221     234778999999988754

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=95.28  E-value=0.05  Score=39.55  Aligned_cols=29  Identities=21%  Similarity=0.384  Sum_probs=26.4

Q ss_pred             CCcceEEEEeCCHHHHHHHHHhcCCeEee
Q 031774           89 RGFGHIGITVDDVYKACERFERLGVEFAK  117 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~~G~~~~~  117 (153)
                      .|+.++|+.++|+++..+++.++|+.+..
T Consensus       105 eGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A          105 QGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             CCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence            59999999999999999999999987653

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=95.00  E-value=0.21  Score=35.66  Aligned_cols=74  Identities=23%  Similarity=0.285  Sum_probs=48.1

Q ss_pred             CcEEEEEeccCCCCCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEE
Q 031774           61 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  140 (153)
Q Consensus        61 ~~~lel~~~~~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel  140 (153)
                      +..||+........ ....++.  .....|+.|+.+.|+|++++.+.+...|++.......  ..++.+.-| +|..|.+
T Consensus       132 Gn~iEl~~~~~~~~-~~~~~~~--~~~i~glghV~L~v~d~~~~~~fl~~LG~~~~~~~~~--~~~f~~~G~-~g~~i~v  205 (252)
T 3pkv_A          132 GNIIELISRQQAAP-VLDKPFS--ADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIE--PAGLNFIGD-QDLFLLL  205 (252)
T ss_dssp             CCEEEEEEESSSSC-CCCSCCC--GGGCCEEEEEEEECSCHHHHHHHHHHTTCCCCGGGCC--TTSCEEEEE-TTEEEEE
T ss_pred             CCEEEEEEeCCCCc-cccCCCC--HHHCcEeeeEEEEeCCHHHHHHHHHHcCCCcccCCCC--hheEEEcCC-CcEEEEE
Confidence            57889876533211 1111121  2335799999999999999999998899988765322  123455567 7777766

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=94.84  E-value=0.17  Score=32.30  Aligned_cols=57  Identities=21%  Similarity=0.275  Sum_probs=43.0

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCCC-c------ccceEEEEECCCCCEEEEeccCc
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG-G------KLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~-~------~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      .++.|+++.|.|++++.+-..+ .|.++...... .      ..+...++.-++|..++|++...
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   82 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE   82 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCC
Confidence            4889999999999999999987 79998763211 0      11234677778889999998643

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=94.74  E-value=0.18  Score=31.33  Aligned_cols=56  Identities=21%  Similarity=0.318  Sum_probs=39.9

Q ss_pred             CCcceEEEEeCCHHHHHHHHHhcCCeEeecCC--CcccceEEEEECCCCCEEEEeccCc
Q 031774           89 RGFGHIGITVDDVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~--~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      .++.|+++.|+|++++.+-.+..|.++.....  ........++.. ++..+|++++..
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~   63 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPDG   63 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEESS
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecCC
Confidence            37899999999999999999888998865431  111123444444 678899998643

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=94.49  E-value=0.11  Score=32.09  Aligned_cols=54  Identities=20%  Similarity=0.294  Sum_probs=38.2

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCCC-cccceEEEEECCCCCEEEEeccC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      ++.|+++.|+|++++.+-.++ .|.++...... ......+++.. ++..+++++..
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   60 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNL-GNTKMELLHPL   60 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEEC-SSSEEEEEEEC
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEec-CCEEEEEEecC
Confidence            678999999999999999988 89988753211 11122344444 57888988754

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=94.18  E-value=0.16  Score=32.38  Aligned_cols=54  Identities=20%  Similarity=0.412  Sum_probs=39.6

Q ss_pred             CcceEEEEeCCHHHHHHHHHhcCCeEeecCC-C-----------cccceEEEEECCCC-CEEEEecc
Q 031774           90 GFGHIGITVDDVYKACERFERLGVEFAKKPD-G-----------GKLKGVAFIKDPDD-YWIEIFDL  143 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~-~-----------~~~~~~~~~~DPdG-~~iel~~~  143 (153)
                      ++.|+++.|+|++++.+-.++.|.++..... .           ......+++.-++| ..|+|++.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            6789999999999999998889998874321 0           11123566777776 78999874

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=93.71  E-value=0.44  Score=28.64  Aligned_cols=51  Identities=27%  Similarity=0.496  Sum_probs=38.9

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      ++.|+++.|+|++++.+-..+ .|.++.....    ....++..++|..+++.+..
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~l~l~~~~   54 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG----NAFAVMRDNDGFILTLMKGK   54 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET----TTEEEEECTTCCEEEEEECS
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC----CcEEEEEcCCCcEEEEEeCC
Confidence            578999999999999999876 8998875431    12356677778888888754

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=93.62  E-value=0.14  Score=33.39  Aligned_cols=55  Identities=20%  Similarity=0.288  Sum_probs=39.0

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCC-CcccceEEEEECCCCCEEEEeccC
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~-~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .++.|+++.|+|++++.+-.++ .|.++..... .......+++.. .+..|+|++..
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~l~l~~~~   63 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEI-GESKIELLEPL   63 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEE-TTEEEEEEEES
T ss_pred             CcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeC-CCeEEEEEeEC
Confidence            3789999999999999999988 8998875321 111123445544 46788998864

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=93.05  E-value=0.18  Score=31.09  Aligned_cols=53  Identities=25%  Similarity=0.308  Sum_probs=37.1

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCC-CcccceEEEEECCCCCEEEEec
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~-~~~~~~~~~~~DPdG~~iel~~  142 (153)
                      .++.|+++.|+|++++.+-..+ .|.++..... .......+++..+ +..++|++
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~l~l~~   58 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG-DIELEIFG   58 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET-TEEEEEEE
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC-CeEEEEEe
Confidence            3788999999999999999966 8998875431 1111223555544 45888888

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=93.03  E-value=0.19  Score=32.48  Aligned_cols=57  Identities=23%  Similarity=0.299  Sum_probs=38.7

Q ss_pred             CCCcceEEEEeCCHHHHHHHHHh-cCCeEeecCC-C----------c----ccceEEEEECCCCCEEEEeccCc
Q 031774           88 PRGFGHIGITVDDVYKACERFER-LGVEFAKKPD-G----------G----KLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        88 ~~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~-~----------~----~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      ..++.|+++.|+|++++.+-..+ .|.++..... .          |    .....+++.. .+..|||++...
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~~   89 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPDE   89 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEECS
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEECC
Confidence            35899999999999999999986 8987653210 0          0    1112344443 478899998643

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=92.84  E-value=0.31  Score=30.70  Aligned_cols=56  Identities=7%  Similarity=0.090  Sum_probs=40.3

Q ss_pred             CCcceEEEEeCCHHHHHHHHH-hcCCeEeecCC-CcccceEEEEECCCC-----CEEEEeccC
Q 031774           89 RGFGHIGITVDDVYKACERFE-RLGVEFAKKPD-GGKLKGVAFIKDPDD-----YWIEIFDLK  144 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~-~~G~~~~~~~~-~~~~~~~~~~~DPdG-----~~iel~~~~  144 (153)
                      .++.|+++.|+|++++.+-.. ..|.++..... .......+++..+++     ..|+|++..
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~   70 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPL   70 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEES
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecC
Confidence            378999999999999999987 48998875421 111113466777775     789999854

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=92.17  E-value=0.6  Score=28.46  Aligned_cols=55  Identities=13%  Similarity=0.120  Sum_probs=39.5

Q ss_pred             CcceEEEEeCCHHHHHHHHH-hcCCeEeecCCC-cccceEEEEECCCCCEEEEeccC
Q 031774           90 GFGHIGITVDDVYKACERFE-RLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~-~~G~~~~~~~~~-~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .+.|+++.|.|++++.+-.. ..|.++...... ......+++.-++|..++|++..
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   59 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRT   59 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEET
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecC
Confidence            46799999999999999985 569888754211 11113456676678999999864

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=91.66  E-value=1  Score=28.50  Aligned_cols=54  Identities=11%  Similarity=0.120  Sum_probs=38.5

Q ss_pred             CCCcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           88 PRGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        88 ~~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      ..++.|+++.|.|++++.+-..+ .|.++........  ..++..+..+..++|++.
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~--~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARR--WNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTT--EEEEEETTTTEEEEEEEC
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCc--EEEEEecCCCcEEEEecc
Confidence            45899999999999999999965 7998876542211  112223445788888875

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=91.54  E-value=0.57  Score=29.25  Aligned_cols=53  Identities=17%  Similarity=0.296  Sum_probs=37.2

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccc-eEEEEECCCCCEEEEeccC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  144 (153)
                      ++.|+++.|+|++++.+-..+ .|.++.......... ..+++ . ++..++|++..
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~-~-~~~~l~l~~~~   59 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVL-P-GGLSIVLREHD   59 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEEC-T-TSCEEEEEEET
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEE-c-CCCEEEEEeCC
Confidence            578999999999999999876 799887543211111 12333 4 78889998864

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=90.95  E-value=0.5  Score=28.67  Aligned_cols=53  Identities=19%  Similarity=0.146  Sum_probs=36.5

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecC-CCcccceEEEEECCCCCEEEEecc
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKP-DGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~-~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      ++.|+++.|+|++++.+-..+ .|.++.... ........+++.-+++ .++|++.
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~~   59 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ-ELEIFIS   59 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE-EEEEEEC
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe-EEEEEec
Confidence            678999999999999999976 899887532 1111112244554555 8888874

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=90.25  E-value=0.66  Score=29.05  Aligned_cols=50  Identities=18%  Similarity=0.200  Sum_probs=36.7

Q ss_pred             CcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEec
Q 031774           90 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  142 (153)
                      ++.|+++.|+|++++.+-.++.|.++......   .....+.-++|..++|++
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~---~~~~~~~~~~~~~l~l~~   53 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADS---APHTEAVLDGGIRLAWDT   53 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGG---CSEEEEECTTSCEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCC---CceEEEEcCCCeEEEEec
Confidence            57899999999999999988889877654311   112444546788888876

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=90.10  E-value=2  Score=26.49  Aligned_cols=51  Identities=10%  Similarity=-0.037  Sum_probs=37.6

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .++.|+++.|.|++++.+-.++ .|.++.....     ..+.+...+|..+.|++..
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~l~l~~~~   63 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP-----RYVAFPSSGDALFAIWSGG   63 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS-----SEEEEECSTTCEEEEESSS
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC-----CEEEEEcCCCcEEEEEeCC
Confidence            3788999999999999988876 7887764321     1244555677888888754

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=90.08  E-value=1.1  Score=27.35  Aligned_cols=56  Identities=16%  Similarity=0.005  Sum_probs=37.9

Q ss_pred             CCcceEEEEeCCHHHHHHHHH-hcCCeEeecCCCcccceEEEEECCCC-CEEEEeccC
Q 031774           89 RGFGHIGITVDDVYKACERFE-RLGVEFAKKPDGGKLKGVAFIKDPDD-YWIEIFDLK  144 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~-~~G~~~~~~~~~~~~~~~~~~~DPdG-~~iel~~~~  144 (153)
                      .++.|+++.|.|++++.+-.. ..|.++............+.+..++| ..+++.+..
T Consensus        12 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   69 (133)
T 4hc5_A           12 AYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPS   69 (133)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEECTTCSCEEEEECGG
T ss_pred             cceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCCceEEEEECCCCceEEEEecCc
Confidence            478999999999999999985 58998876432111122345555544 567877654

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=90.01  E-value=1.5  Score=26.96  Aligned_cols=54  Identities=17%  Similarity=0.246  Sum_probs=37.1

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCC-CcccceEEEEECCC---CCEEEEecc
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPD---DYWIEIFDL  143 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~-~~~~~~~~~~~DPd---G~~iel~~~  143 (153)
                      ++.|+++.|.|++++.+-..+ .|.++..... .......+++.-++   +..+++.+.
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN   60 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEc
Confidence            468999999999999999886 8998875431 11111234555444   688998864

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=88.51  E-value=2.1  Score=36.48  Aligned_cols=50  Identities=12%  Similarity=0.032  Sum_probs=36.4

Q ss_pred             ceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           92 GHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        92 ~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      ..+.|.+.|+.++.+.|.+.  .....|.... ...+|..||=||.|.|....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~dp~~~~~~~~~~~  174 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEI--GAEIIPSKID-LVEFSTRDPMGDVISFSSYP  174 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHS--SCCBCCCC---CCCEEEESSSEEEEECCSSS
T ss_pred             ceEEEEeCcHHHHHHHhhhc--ccccCCCCCC-ceeEEEecCCCCEEeeecCC
Confidence            57999999999999999987  2223332211 12589999999999997754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=88.29  E-value=1.8  Score=27.71  Aligned_cols=50  Identities=10%  Similarity=0.070  Sum_probs=37.1

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      ++.|+.+.|.|++++.+-..+ .|.++.....     ..+++.-++|..+.|+...
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~-----~~~~~~~~~g~~l~l~~~~   56 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP-----TFAMFVMKTGLRLGLWAQE   56 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHHHHHTCCCSEECS-----SEEEEECTTSCEEEEEEGG
T ss_pred             cccEEEEEeCCHHHHHHHHHHHcCCEEeccCC-----CEEEEEcCCCcEEEEecCC
Confidence            678999999999999998877 8988765431     2345665678888887653

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=87.93  E-value=2  Score=26.95  Aligned_cols=56  Identities=20%  Similarity=0.188  Sum_probs=38.7

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCC-CcccceEEEEECCC---CCEEEEeccC
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPD---DYWIEIFDLK  144 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~-~~~~~~~~~~~DPd---G~~iel~~~~  144 (153)
                      .++.|+++.|.|++++.+-..+ .|.++..... +.......++.-++   +..++|++..
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~   67 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNY   67 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEET
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecC
Confidence            3788999999999999999875 8998875431 11111235555554   5889998754

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=87.75  E-value=2.4  Score=26.88  Aligned_cols=48  Identities=8%  Similarity=0.184  Sum_probs=36.2

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      ++.|+.+.|+|++++.+-..+ .|.++....  +   ..+++.. +|..++|++.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~---~~~~~~~-~~~~l~l~~~   53 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN--P---EIIFYQM-NGFVLATWLV   53 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC--S---SEEEEEC-SSSEEEEEEH
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC--C---CEEEEEc-CCEEEEEEec
Confidence            678999999999999999886 798776543  1   2344544 6788888874

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=87.42  E-value=1.9  Score=27.32  Aligned_cols=50  Identities=10%  Similarity=0.116  Sum_probs=36.8

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      ++.|+.+.|+|++++.+-..+ .|.++.... .    ...++.-++|..++|++..
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~-~----~~~~~~~~~~~~l~l~~~~   75 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESS-P----TFSLFVLANGMKLGLWSRH   75 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEE-T----TEEEEECTTSCEEEEEETT
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCC-C----CeEEEEcCCCcEEEEEeCC
Confidence            788999999999999998876 798776432 1    1244555557888887754

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=85.92  E-value=2.8  Score=27.59  Aligned_cols=55  Identities=18%  Similarity=0.195  Sum_probs=38.5

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCC-CcccceEEEEECCC------------------CCEEEEecc
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPD------------------DYWIEIFDL  143 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~-~~~~~~~~~~~DPd------------------G~~iel~~~  143 (153)
                      .++.|+++.|.|++++.+-..+ .|.++..... .+.....+++..++                  +..|+|++.
T Consensus        30 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~  104 (184)
T 2za0_A           30 FLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHN  104 (184)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEec
Confidence            4789999999999999999886 8998875431 11111234555543                  678999864

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=85.67  E-value=2.2  Score=28.13  Aligned_cols=47  Identities=19%  Similarity=0.126  Sum_probs=32.9

Q ss_pred             CCcceEEEEeCCHHHHHHHHH-hcCCeEeecCCC-cccceEEEEECCCC
Q 031774           89 RGFGHIGITVDDVYKACERFE-RLGVEFAKKPDG-GKLKGVAFIKDPDD  135 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~-~~G~~~~~~~~~-~~~~~~~~~~DPdG  135 (153)
                      ..+.|+++.|.|++++.+-.. ..|.++...... ......+|+..+++
T Consensus        33 ~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~   81 (187)
T 3vw9_A           33 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDK   81 (187)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCG
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCc
Confidence            478999999999999999995 689988754321 11123456666663

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=85.55  E-value=1.7  Score=26.89  Aligned_cols=51  Identities=12%  Similarity=0.179  Sum_probs=34.7

Q ss_pred             CcceEEEEeCCHHHHHHHHHhcCCeEeec-CCCcccceEEEEECCCCCEEEEecc
Q 031774           90 GFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~~G~~~~~~-~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      .+.|+++.|.|++++.+-..+.|.++... ...+.   .+++.-.+|..++|...
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~---~~~~~~~~~~~l~l~~~   57 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVDKGS---EVHRAVHNGVEFSLYSI   57 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-----C---CEEEEEETTEEEEEEEC
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCC---EEEEEeCCCeEEEEEEC
Confidence            57899999999999999888899887765 22111   24444246677777543

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=85.44  E-value=3  Score=25.35  Aligned_cols=49  Identities=20%  Similarity=0.296  Sum_probs=35.5

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      .++.|+++.|+|++++.+-..+ .|.++..... +    .+++.- .|..+++.+.
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~-~----~~~~~~-~~~~~~l~~~   58 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA-G----RIALEF-GHQKINLHQL   58 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT-T----EEEEEE-TTEEEEEEET
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEecC-C----eEEEEc-CCEEEEEEcC
Confidence            4789999999999999999987 8999886541 1    123322 3567777764

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=85.38  E-value=4.3  Score=25.65  Aligned_cols=50  Identities=16%  Similarity=0.238  Sum_probs=36.8

Q ss_pred             CCcceEEEEeCCHHHHHHHH----HhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           89 RGFGHIGITVDDVYKACERF----ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .++.|+++.|.|++++.+-.    ...|.++......+    ..|+.  ++..++|++..
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~----~~~~~--g~~~l~l~~~~   72 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRG----KSYKH--GKTYLVFVQTE   72 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTE----EEEEE--TTEEEEEEECC
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCC----ceEec--CCeEEEEEEcC
Confidence            47889999999999999888    56899887543221    23555  56788888754

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=85.33  E-value=3.1  Score=26.23  Aligned_cols=50  Identities=16%  Similarity=0.180  Sum_probs=36.7

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .++.|+++.|.|++++.+-..+ .|.++..... +    ..++.- +|..++|.+..
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~----~~~l~~-~~~~l~l~~~~   72 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ-N----RKALIF-GAQKINLHQQE   72 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT-T----EEEEEE-TTEEEEEEETT
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC-C----eEEEEe-CCeEEEEeccC
Confidence            4789999999999999999988 8999887642 1    123322 45677777654

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=84.42  E-value=2.8  Score=31.27  Aligned_cols=28  Identities=32%  Similarity=0.467  Sum_probs=26.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHhcCCeEee
Q 031774           90 GFGHIGITVDDVYKACERFERLGVEFAK  117 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~~G~~~~~  117 (153)
                      .++|+..+|.||+++.+.|+++|+++..
T Consensus       235 ~iNHlT~rv~DId~v~~~m~~~G~~~k~  262 (340)
T 3iuz_A          235 AFNHATDRVDDVFGLSEQQXALGRPMXD  262 (340)
T ss_dssp             SCSEEEEECSCHHHHHHHHHHTTCCBCS
T ss_pred             ccccccCCcCCHHHHHHHHHHcCCChhh
Confidence            7899999999999999999999987764

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=81.07  E-value=4.3  Score=26.06  Aligned_cols=50  Identities=22%  Similarity=0.315  Sum_probs=35.8

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      .++.|+++.|+|++++.+-..+ .|.++......    ..+++.. ++..+++++.
T Consensus         7 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~----~~~~~~~-g~~~~~l~~~   57 (160)
T 3r4q_A            7 SAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG----QLVFFKC-GRQMLLLFDP   57 (160)
T ss_dssp             SCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT----TEEEEEE-TTEEEEEECH
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC----cEEEEeC-CCEEEEEEec
Confidence            4789999999999999999887 89988765321    1234333 4566777653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	153
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	4e-33
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	7e-14
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-13
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	8e-12
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	6e-11
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	2e-10
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	7e-10
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	5e-09
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	7e-08
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	2e-06
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	5e-06
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	1e-05
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	2e-05
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	7e-05
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	1e-04
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-04
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	4e-04
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	0.003
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	0.004

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (282), Expect = 4e-33
 Identities = 92/149 (61%), Positives = 112/149 (75%), Gaps = 1/149 (0%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   +
Sbjct: 28  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 87

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
            AT+ELTHNWGTE D     YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD
Sbjct: 88  KATLELTHNWGTEDDETQS-YHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD 146

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKTIGKI 149
            GK+KG+AFI+DPD YWIEI +   +  +
Sbjct: 147 DGKMKGLAFIQDPDGYWIEILNPNKMATL 175

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 62.9 bits (152), Expect = 7e-14
 Identities = 21/136 (15%), Positives = 31/136 (22%), Gaps = 3/136 (2%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
            F   D       +S  LGM    + D                                 
Sbjct: 17  EFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTS--GDLRFLFTAPYSPSLS 74

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
              I+ T      S          +S   G   + I V+D   A       G   +  P 
Sbjct: 75  AGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPI 134

Query: 120 DGGKLKGVAFIKDPDD 135
              +   +A +K   D
Sbjct: 135 VLNEAVTIAEVKLYGD 150

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 62.0 bits (149), Expect = 1e-13
 Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 27/154 (17%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY                   +
Sbjct: 7   MLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY---------------GPETE 51

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
            A IELT+NWG +       Y           HI ++VD+  +ACE+  + G    ++  
Sbjct: 52  EAVIELTYNWGVDKYELGTAYG----------HIALSVDNAAEACEKIRQNGGNVTREAG 101

Query: 120 -DGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 152
              G    +AF++DPD Y IE+ + K  G+  G+
Sbjct: 102 PVKGGTTVIAFVEDPDGYKIELIEEKDAGRGLGN 135

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 57.0 bits (136), Expect = 8e-12
 Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 28/145 (19%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+ D   S+ FY+  LGM +L++ D PE K++L FLGY                    
Sbjct: 8   MIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGP------------------ 49

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
                      T  +  +            +GHI I V+DV +      +  V    + +
Sbjct: 50  -------EMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE 102

Query: 121 GGKLKGVAFIKDPDDYWIEIFDLKT 145
            G +   AF+ DPD Y+IE+ + KT
Sbjct: 103 SGFM---AFVVDPDGYYIELLNEKT 124

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 54.9 bits (131), Expect = 6e-11
 Identities = 17/150 (11%), Positives = 34/150 (22%), Gaps = 29/150 (19%)

Query: 1   MFRIKDP----KVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 56
             RI  P       + FY   L +  +         +     G                 
Sbjct: 10  QIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHAD------------ 56

Query: 57  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 116
                    L              + +                ++     + + +G +  
Sbjct: 57  -------YHLEFTQYEGGSTAPVPHPDS-----LLVFYVPNAVELAAITSKLKHMGYQEV 104

Query: 117 KKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 146
           +  +     G   I+DPD + I   + K I
Sbjct: 105 ESENPYWSNGGVTIEDPDGWRIVFMNSKGI 134

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 53.5 bits (127), Expect = 2e-10
 Identities = 20/142 (14%), Positives = 49/142 (34%), Gaps = 11/142 (7%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              ++    ++ F+   +G++L  R +    +++    G        A      + T   
Sbjct: 14  SIVVESLDNAISFFEE-IGLNLEGRANVE-GEWAGRVTGLGSQCVEIAM-----MVTPDG 66

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
            + IEL+      +  D   +        G+  +  TV+D+ +   R  + G E   +  
Sbjct: 67  HSRIELSRFLTPPTIAD---HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVV 123

Query: 120 DGGKLKGVAFIKDPDDYWIEIF 141
                  + +I+  +   I + 
Sbjct: 124 QYENSYRLCYIRGVEGILIGLA 145

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 51.9 bits (123), Expect = 7e-10
 Identities = 19/144 (13%), Positives = 36/144 (25%), Gaps = 19/144 (13%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
            +   D   +  +Y    G   L R + PE       +                      
Sbjct: 12  AYACPDADEASKYYQETFGWHELHREENPEQGVVEIMM---------------APAAKLT 56

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
               ++        +     +   ++   G  H+   VDD+          GV+      
Sbjct: 57  EHMTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEP 116

Query: 120 -DGGKLKGVAFI--KDPDDYWIEI 140
             G     + F+  K      IE+
Sbjct: 117 KLGTGGNRINFMHPKSGKGVLIEL 140

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 50.2 bits (119), Expect = 5e-09
 Identities = 20/143 (13%), Positives = 35/143 (24%), Gaps = 9/143 (6%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
                D   +   +S  LG  L  R D      +   L            +         
Sbjct: 18  ELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRS------GSLSFLFTAPYA 71

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 119
                 T    + S    + +   +        + + V D   A       G   A  P 
Sbjct: 72  HGADAATAALPSFSAAAARRFAADH--GLAVRAVALRVADAEDAFRASVAAGARPAFGPV 129

Query: 120 DGGKLKGVAFIKDPDDYWIEIFD 142
           D G+   +A ++   D  +    
Sbjct: 130 DLGRGFRLAEVELYGDVVLRYVS 152

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 46.8 bits (110), Expect = 7e-08
 Identities = 21/146 (14%), Positives = 35/146 (23%), Gaps = 23/146 (15%)

Query: 2   FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 61
           F + + K +  +YS   GM L+                  +                   
Sbjct: 13  FAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTN-----------------GS 55

Query: 62  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 119
           A   LT      +        +      G   + I V D   A       G     +P  
Sbjct: 56  ARFVLTSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYE 115

Query: 120 ---DGGKLKGVAFIKDPDDYWIEIFD 142
              + G +  +A I         + D
Sbjct: 116 LKDEHGTVV-LAAIATYGKTRHTLVD 140

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 42.7 bits (99), Expect = 2e-06
 Identities = 19/143 (13%), Positives = 37/143 (25%), Gaps = 27/143 (18%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
               K+   +  FY  VLG+  +K     +     +    + T                 
Sbjct: 11  SMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTG---------------- 54

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAK 117
                        S  +                IG+ V          ERFE+  V+ ++
Sbjct: 55  -------SPGTELSFFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSE 107

Query: 118 KPDGGKLKGVAFIKDPDDYWIEI 140
                    + F +D +   + +
Sbjct: 108 MTTYANRPALQF-EDAEGLRLVL 129

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 41.4 bits (96), Expect = 5e-06
 Identities = 17/142 (11%), Positives = 36/142 (25%), Gaps = 31/142 (21%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
            F ++D +        V     +   D  +                       +   F  
Sbjct: 9   TFIVRDLERMTRILEGVFDAREVYASDTEQFSL--------------------SREKFFL 48

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
              I +    G +       +              I   D  +  ER  +LG++      
Sbjct: 49  IGDIWVAIMQGEKLAERSYNHI----------AFKIDDADFDRYAERVGKLGLDMRPPRP 98

Query: 121 GGKLKG-VAFIKDPDDYWIEIF 141
             + +G   +  D D++  E+ 
Sbjct: 99  RVEGEGRSIYFYDDDNHMFELH 120

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 39.8 bits (92), Expect = 1e-05
 Identities = 16/106 (15%), Positives = 32/106 (30%), Gaps = 11/106 (10%)

Query: 40  YEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD 99
            E      AD  +     F   +   +          +F+              I I V+
Sbjct: 20  LEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSGI----------IIHIEVE 69

Query: 100 DVYKACERFERLGVEFAKKPDGGKLKG-VAFIKDPDDYWIEIFDLK 144
           DV +  +R   LG++    P           ++ P    ++ + +K
Sbjct: 70  DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK 115

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 39.6 bits (92), Expect = 2e-05
 Identities = 17/103 (16%), Positives = 26/103 (25%), Gaps = 4/103 (3%)

Query: 40  YEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD 99
           +E                  +   I L  N    S   +    +G         +   V 
Sbjct: 27  FEIMGFTKVATHRSKNVHLYRQGEINLILNNEPNSIASYFAAEHGP----SVCGMAFRVK 82

Query: 100 DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 142
           D  KA  R   LG +      G     +  IK      + + D
Sbjct: 83  DSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLID 125

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.3 bits (88), Expect = 7e-05
 Identities = 19/141 (13%), Positives = 31/141 (21%), Gaps = 37/141 (26%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              + D   S+ FY  +LG  L  R                                   
Sbjct: 9   TLAVADLPASIAFYRDLLGFRLEAR----------------------------------- 33

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
                             +  + G +        GI   D  +   +    GV   K+  
Sbjct: 34  WDQGAYLELGSLWLCLSREPQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNR 93

Query: 121 GGKLKGVAFIKDPDDYWIEIF 141
                   +  DPD + +E  
Sbjct: 94  SEG--DSFYFLDPDGHRLEAH 112

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 16/130 (12%), Positives = 35/130 (26%), Gaps = 17/130 (13%)

Query: 10  SLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN 69
             +FY ++      +  D       L                 + +        I L   
Sbjct: 21  WANFYEKLFNFREARYFDIKGEYTGLTS---------------KAMSAPDGMIRIPLNEE 65

Query: 70  WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAF 129
               +    +     N E  G  H+    DD+ K  +  +++G+ F   P     + +  
Sbjct: 66  SSKGAGQIEEFLMQFNGE--GIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEG 123

Query: 130 IKDPDDYWIE 139
                   ++
Sbjct: 124 RLPDHGEPVD 133

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 36.9 bits (84), Expect = 2e-04
 Identities = 20/143 (13%), Positives = 39/143 (27%), Gaps = 38/143 (26%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
              + D + S+ F+  +LG++L  R +                                 
Sbjct: 9   TLAVSDLQKSVTFWHELLGLTLHARWNTGAYLT--------------------------- 41

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKK 118
                             +       +   + H   TV  +D     +R E+ GV   K+
Sbjct: 42  -------CGDLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQ 94

Query: 119 PDGGKLKGVAFIKDPDDYWIEIF 141
                     +  DPD + +E+ 
Sbjct: 95  NKSEG--ASFYFLDPDGHKLELH 115

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 36.4 bits (83), Expect = 4e-04
 Identities = 19/143 (13%), Positives = 37/143 (25%), Gaps = 32/143 (22%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           +    +   + D +++VLG  L +++          FL                      
Sbjct: 10  LMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK----------------- 52

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
                  H+      P+    H+             T +D+ +A +            P 
Sbjct: 53  ------AHDVAFIHHPEKGRLHH-------VSFHLETWEDLLRAADLISMTDTSIDIGPT 99

Query: 121 GGKLKGV--AFIKDPDDYWIEIF 141
              L      +  DP     E+F
Sbjct: 100 RHGLTHGKTIYFFDPSGNRNEVF 122

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 33.8 bits (76), Expect = 0.003
 Identities = 16/143 (11%), Positives = 31/143 (21%), Gaps = 36/143 (25%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             R+ D   +L+ Y  +LG+  + R D   +                             
Sbjct: 12  QLRVLDMSKALEHYVELLGLIEMDRDDQGRVYL--------------------------- 44

Query: 61  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 120
                    W                     G   +  D + +        G    + P 
Sbjct: 45  -------KAWTEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPA 97

Query: 121 GGKLKG--VAFIKDPDDYWIEIF 141
           G           + P  +  E++
Sbjct: 98  GELNSCGRRVRFQAPSGHHFELY 120

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 33.1 bits (74), Expect = 0.004
 Identities = 17/139 (12%), Positives = 31/139 (22%), Gaps = 38/139 (27%)

Query: 3   RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA 62
              +P  +  FY  +LGM +     +                                  
Sbjct: 9   ATPEPARAQAFYGDILGMPVAMDHGWI--------------------------------- 35

Query: 63  TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DG 121
                 +           +            + I VD+  +   R  + G+     P   
Sbjct: 36  ----VTHASPLEAHAQVSFAREGGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTE 91

Query: 122 GKLKGVAFIKDPDDYWIEI 140
                  F++DP    I I
Sbjct: 92  AWGVQRLFLRDPFGKLINI 110

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	153
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.91
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.86
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.85
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.84
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.82
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.81
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.8
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.79
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.77
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.77
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.76
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.74
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.73
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.73
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.73
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.72
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.71
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.7
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.69
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.69
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.68
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.68
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.68
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.67
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.67
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.66
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.65
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.65
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.62
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.57
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.38
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.29
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.14
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	99.07
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.04
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.02
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.88
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.68
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.68
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.42
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	96.2
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	94.19
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	93.03
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	92.65
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	90.53
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	90.47
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	90.0
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	88.18
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	87.52
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	86.49
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	85.96
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	84.64
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	83.0
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	82.24
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	81.95
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	81.83
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	80.57
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	80.15

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-23  Score=143.20  Aligned_cols=149  Identities=62%  Similarity=1.176  Sum_probs=99.9

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||++......+..++...++..+..............+.........+.......... ...
T Consensus        28 ~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  106 (176)
T d1qipa_          28 MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDE-TQS  106 (176)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGCT-TCC
T ss_pred             EEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecccccc-CcC
Confidence            3789999999999999999999987776666777777765443211111111111112222333332222211100 001


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCcccccC
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG  150 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~  150 (153)
                      .........|+.|+||.++|+++++++|+++|+++..+|..+.....+||+|||||.|||+|+.+..++|
T Consensus       107 ~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~~~~~~~  176 (176)
T d1qipa_         107 YHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKMATLM  176 (176)
T ss_dssp             CBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTTTGGGCC
T ss_pred             ccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCCCCCccC
Confidence            2222223458999999999999999999999999999997766556788999999999999999877664

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.86  E-value=3.6e-21  Score=126.05  Aligned_cols=116  Identities=15%  Similarity=0.190  Sum_probs=84.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++|||++..+...+. .+..++++.++.                 ...+++....+...      .
T Consensus        15 ~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~~-----------------~~~l~~~~~~~~~~------~   70 (137)
T d1twua_          15 RPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA-----------------DYHLEFTQYEGGST------A   70 (137)
T ss_dssp             EECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSSS-----------------SEEEEEEEETTCCC------C
T ss_pred             cccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCCC-----------------ceeeeccccccccc------c
Confidence            45789999999999999999987765332 356666665432                 35566654433221      1


Q ss_pred             CCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                          ..+.+..|++|.|++   +++++++|+++|+++..++...+..+.+||+|||||+|||++...
T Consensus        71 ----~~~~~~~hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          71 ----PVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             ----CCCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSCC
T ss_pred             ----cccccCceEEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCCC
Confidence                122367899999876   888999999999999876654333457899999999999998654

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.85  E-value=1.3e-20  Score=124.36  Aligned_cols=121  Identities=15%  Similarity=0.244  Sum_probs=83.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecC-----------CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEecc
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP-----------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW   70 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~   70 (153)
                      |.|+|+++|++||++ |||++..+....           .......++...+                 +...++++...
T Consensus        15 i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~~~~~~l~~~~   76 (149)
T d1ss4a_          15 IVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD-----------------GHSRIELSRFL   76 (149)
T ss_dssp             EECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT-----------------SSCEEEEEEEE
T ss_pred             EEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecc-----------------cceEEEEEeec
Confidence            789999999999998 999998765421           2223444444322                 24566665433


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEecc
Q 031774           71 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~  143 (153)
                      .......   .........|+.|+||.|+|+++++++|+++|+++..+|..... .+.+|++|||||+|||+|+
T Consensus        77 ~~~~~~~---~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          77 TPPTIAD---HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             ESCCCCB---CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred             cccCccc---ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEc
Confidence            2222111   11111223588999999999999999999999999887743222 2478999999999999985

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=2.2e-19  Score=115.87  Aligned_cols=126  Identities=40%  Similarity=0.729  Sum_probs=82.4

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||++......+...+....+......               .....+.........      
T Consensus         7 ~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~------   65 (135)
T d1f9za_           7 MLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK------   65 (135)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTT---------------TSCEEEEEEETTCCC------
T ss_pred             EEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceee---------------ecccccccccccccc------
Confidence            37899999999999999999999877655544444444332210               012222222111111      


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCc--ccceEEEEECCCCCEEEEeccCcccccCC
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKTIGKIGG  151 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iel~~~~~~~~~~~  151 (153)
                      .    ....+..|+++.+++++++.++++++|..+..+|...  ...+.+||+|||||+|||+|.+...++++
T Consensus        66 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~~  134 (135)
T d1f9za_          66 Y----ELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGLG  134 (135)
T ss_dssp             C----CCCSSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-------C
T ss_pred             c----cccccceeeccchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccccCC
Confidence            1    1224778999999999999999999999998766322  22357889999999999999987777654

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.82  E-value=4.8e-20  Score=117.31  Aligned_cols=107  Identities=15%  Similarity=0.156  Sum_probs=78.3

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++||+++....+    ++  +.+..+                   +..|.+........      .
T Consensus         8 i~V~di~~a~~FYe~~lg~~~~~~~~----~~--~~~~~g-------------------~~~l~l~~~~~~~~------~   56 (115)
T d2i7ra1           8 IIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIG-------------------SHCLMLSQNHLVPL------E   56 (115)
T ss_dssp             EECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEET-------------------TEEEEEESSCSSSC------C
T ss_pred             EEECCHHHHHHHHHHhhCCceeeecC----Ce--EEEEEc-------------------CceeeeeecccCCC------C
Confidence            78999999999999999999876532    23  233332                   35666653222111      0


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  144 (153)
                          .. ....+++|.|+|+++++++++++|+++..+|...+++ +.+||+|||||.|||.+.+
T Consensus        57 ----~~-~~~~~~~f~v~D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          57 ----NF-QSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             ----CC-CSCEEEEEECSCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             ----CC-CcceEEEEEECCHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEeC
Confidence                11 1335899999999999999999999999887554443 5789999999999999864

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.81  E-value=4.6e-19  Score=116.50  Aligned_cols=120  Identities=15%  Similarity=0.154  Sum_probs=79.7

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCcc-EEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK-FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      .|.|+|+++|++||+++|||++..+....+.. ....+.+.....               ....+.+........     
T Consensus        11 ~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~~~~~~~-----   70 (144)
T d1zswa1          11 SMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGS---------------PGTELSFFEIPLVGR-----   70 (144)
T ss_dssp             EEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCC---------------TTSEEEEEECTTCCB-----
T ss_pred             EEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccc---------------eeeEEeecccccccC-----
Confidence            37899999999999999999999876543322 333333322110               134455543211111     


Q ss_pred             CCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           80 GYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                       .   ....++++|+||.|+|   ++++.++|++.|+.+..+.. ......+||+|||||.|||++...
T Consensus        71 -~---~~~~~~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~-~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          71 -T---YRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT-YANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             -C---BCCBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEE-ETTEEEEEEECTTCCEEEEEECTT
T ss_pred             -C---ccCCCceeEEEEecCCchhHHHHhhhhhccceeeeCccc-cCCeEEEEEECCCCCEEEEEEeCC
Confidence             1   1122468999999998   78889999999998754432 223457899999999999998754

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.80  E-value=2.3e-19  Score=112.70  Aligned_cols=103  Identities=17%  Similarity=0.255  Sum_probs=72.3

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++|||++.....    .+ ..+...+                   .....+... ....       
T Consensus         8 l~v~d~~~a~~FY~~~lG~~~~~~~~----~~-~~~~~~~-------------------~~~~~~~~~-~~~~-------   55 (111)
T d2pjsa1           8 IATPEPARAQAFYGDILGMPVAMDHG----WI-VTHASPL-------------------EAHAQVSFA-REGG-------   55 (111)
T ss_dssp             EECSCGGGGHHHHTTTTCCCEEEECS----SE-EEEEEEE-------------------EEEEEEEEE-SSSB-------
T ss_pred             EEeCCHHHHHHHHHHhhCCceeeccc----ce-eEecccc-------------------ccceeeecc-cccC-------
Confidence            78999999999999999999887542    12 2222211                   111222111 1110       


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEe
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  141 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  141 (153)
                           ...+..|+.|.++|+++++++++++|+++..+|...+++ +.+|++|||||+|||+
T Consensus        56 -----~~~~~~~~~~~~~dvd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          56 -----SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             -----TTBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             -----CCCceeEEEEEecCHHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence                 012446999999999999999999999998877554443 6789999999999986

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.79  E-value=1.1e-19  Score=119.07  Aligned_cols=127  Identities=17%  Similarity=0.240  Sum_probs=86.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||+++||++.......+..+....+....             ++...+...+++.....+......  .
T Consensus        13 i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~el~~~~~~~~~~~~--~   77 (145)
T d1jc4a_          13 YACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPA-------------AKLTEHMTQVQVMAPLNDESTVAK--W   77 (145)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESS-------------SSCCTTCCEEEEEEESSTTSHHHH--H
T ss_pred             EEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeece-------------eccccccchhhhhhhhcccCcccc--c
Confidence            7899999999999999999998876655544433333221             112223678888765443321110  1


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC-CCcccce-EEEE--ECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DGGKLKG-VAFI--KDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~-~~~~~~~-~~~~--~DPdG~~iel~~~  143 (153)
                      ........|+.|+||.|+|+++++++|+++|+++..++ ..+..++ .+|+  +||+|++|||+|.
T Consensus        78 ~~~~~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~  143 (145)
T d1jc4a_          78 LAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQY  143 (145)
T ss_dssp             HHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEEC
T ss_pred             ccccCCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEEC
Confidence            11112235899999999999999999999999987543 3333333 4455  7999999999995

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=3.1e-18  Score=107.89  Aligned_cols=102  Identities=15%  Similarity=0.215  Sum_probs=72.8

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++..+..   ..+  +++..++                  ...+.+......        
T Consensus         8 ~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~--~~~~~~~------------------~~~~~~~~~~~~--------   56 (113)
T d1xqaa_           8 NLTVADVVAAREFLEKYFGLTCSGTRG---NAF--AVMRDND------------------GFILTLMKGKEV--------   56 (113)
T ss_dssp             EEEESCHHHHHHHHHHHHCCEEEEEET---TTE--EEEECTT------------------CCEEEEEECSSC--------
T ss_pred             EEEeCCHHHHHHHHHHhhCCEEEEeec---Ccc--eeeeecc------------------eeeeeeeeeecc--------
Confidence            378999999999999999999987643   222  3333221                  355666432111        


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEe
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  141 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~  141 (153)
                            ..++..|++|.++|   +++++++++++|+++...+..  .++.+||+|||||.|||.
T Consensus        57 ------~~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~--~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          57 ------QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHA--HAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             ------CCCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCCCEEC---CEEEEEEETTTEEEEEE
T ss_pred             ------cccccceeeeeeccccchhhhhhhHHHcCCccccCCCC--ceEEEEEECCCCCEEEEE
Confidence                  11256899999987   678999999999987665533  245689999999999984

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.77  E-value=2.4e-18  Score=111.14  Aligned_cols=111  Identities=15%  Similarity=0.194  Sum_probs=76.1

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCcc-EEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK-FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      .|.|+|++++++||+++|||++.......... ....++..                   +...+++.....+       
T Consensus         9 ~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~-------   62 (130)
T d1r9ca_           9 TFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLI-------------------GDIWVAIMQGEKL-------   62 (130)
T ss_dssp             EEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEE-------------------TTEEEEEEECCCC-------
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEec-------------------CCEEEeecccccc-------
Confidence            37899999999999999999998875533211 12222222                   1345555432111       


Q ss_pred             CCCCCCCCCCCcceEEEEeC--CHHHHHHHHHhcCCeEeecCCC-cccceEEEEECCCCCEEEEeccC
Q 031774           80 GYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~--di~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                             ...+..|++|.++  |+++++++|+++|+++..++.. ...++.+||+|||||+|||....
T Consensus        63 -------~~~~~~~~~f~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          63 -------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             -------SSCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             -------cccceeeeeecccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence                   1125679999775  7999999999999998866533 22345789999999999998755

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.76  E-value=3.7e-18  Score=114.61  Aligned_cols=112  Identities=15%  Similarity=0.184  Sum_probs=78.8

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|++++++||+++|||++..+...+.......++......                ...... .  .+        
T Consensus        10 ~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~-~--~~--------   62 (162)
T d1mpya2          10 LMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKA----------------HDVAFI-H--HP--------   62 (162)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBS----------------CSEEEE-E--CS--------
T ss_pred             EEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccc----------------cccccc-c--cC--------
Confidence            37899999999999999999999876655544444444433210                111111 1  11        


Q ss_pred             CCCCCCCCCCcceEEEEeCCHH---HHHHHHHhcCCeEeecCCCcc--cceEEEEECCCCCEEEEeccCc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~---~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~~  145 (153)
                            .+.+..|++|.+.+++   +++++|++.|+.+..+|....  ....+||+|||||.|||+....
T Consensus        63 ------~~~~~~h~~~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          63 ------EKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             ------SSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             ------CCCccceeEEEEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence                  1236889999998755   788999999999887664322  1357999999999999987543

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.74  E-value=1.8e-17  Score=112.10  Aligned_cols=111  Identities=12%  Similarity=0.101  Sum_probs=74.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++..+..  +  .....+..++.                 ...+.+.....+..      
T Consensus        17 ~L~V~Dle~s~~FY~~vLG~~~~~~~~--~--~~~~~~~~~~~-----------------~~~~~~~~~~~~~~------   69 (170)
T d1zswa2          17 ELTVRRLDKMASTLTEIFGYTEVSRND--Q--EAIFQSIKGEA-----------------FGEIVVKYLDGPTE------   69 (170)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEECS--S--EEEEESSTTCS-----------------TTCEEEEECCSSBC------
T ss_pred             EEEeCCHHHHHHHHHHHhCCEEEeecC--c--eEEEEeccCcc-----------------ceEEEecccccccc------
Confidence            378999999999999999999998642  2  22222222211                 22233322211111      


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      .    ....+++||||.|+|   ++++++++++.|+++...... .+.+.+||+|||||.|||...
T Consensus        70 ~----~~~~~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~~-~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          70 K----PGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDR-FYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             B----CCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEEC-SSEEEEEEECTTCCEEEEEEE
T ss_pred             c----cCccccceEEEEeCChHHHHHHHHHHHhcCCCccccccC-CCEEEEEEECCCCcEEEEEEC
Confidence            1    112378899999986   788999999999987543322 234578999999999999874

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.73  E-value=8.8e-18  Score=108.98  Aligned_cols=101  Identities=16%  Similarity=0.265  Sum_probs=73.5

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++..+..  .    .++++.++.                 ...+.+..  ++         
T Consensus        10 i~V~Dl~~s~~FY~~vLG~~~~~~~~--~----~~~l~~~~~-----------------~~~l~l~~--~~---------   55 (131)
T d1lgta1          10 FAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSR-----------------AWRIAVQQ--GE---------   55 (131)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSB-----------------SCSEEEEE--CT---------
T ss_pred             EEeCCHHHHHHHHHHhhCCceeecCC--c----ceEEeecCC-----------------ceEEEEec--CC---------
Confidence            78999999999999999999987642  1    234444331                 23444432  11         


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCc----ccceEEEEECCCCCEEEEec
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iel~~  142 (153)
                            ..++.|++|.+.   |+++++++|+++|+++...+...    ...+.+||+|||||.|||+.
T Consensus        56 ------~~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          56 ------VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             ------TCEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             ------CCCceEEEEEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEe
Confidence                  126789999996   47889999999999998766321    11347899999999999975

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.73  E-value=6.2e-18  Score=108.96  Aligned_cols=115  Identities=19%  Similarity=0.234  Sum_probs=74.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCC-CCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT-ESDPDFKG   80 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~-~~~~~~~~   80 (153)
                      |.|+|+++|++||++ |||.+........  +.  ++..++                  ...+.+...... ...+.   
T Consensus         8 l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~--~~--~~~~~~------------------~~~~~~~~~~~~~~~~~~---   61 (128)
T d1klla_           8 VVVEDMAKSMEFYRK-MGVEIPAEADSAP--HT--EAVLDG------------------GIRLAWDTVETVRSYDPE---   61 (128)
T ss_dssp             EEESCHHHHHHHHHH-TTCCCCTTGGGCS--EE--EEECGG------------------GCEEEEEEHHHHHHHCTT---
T ss_pred             EEcCCHHHHHHHHHH-hCCcccccccccc--ce--eeeccc------------------eeeeeecccccccccCCC---
Confidence            789999999999966 8998876544322  21  222111                  234444321110 00000   


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                      .  ....+.+..|++|.|++   +++++++|+++|+++..+|....+ .+.+||+|||||.|||.++.
T Consensus        62 ~--~~~~~~~~~~l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          62 W--QAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             C--CCCCSSCSCEEEEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             C--CCCccccceeEeeeeccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecC
Confidence            0  01112355799999987   778999999999999988855444 35789999999999998763

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.73  E-value=1.9e-16  Score=102.00  Aligned_cols=116  Identities=37%  Similarity=0.688  Sum_probs=79.1

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|+++|++||+++|||++......+...............               ...............      
T Consensus         8 ~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~------   66 (139)
T d2c21a1           8 MIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEM---------------SSTVLELTYNYGVTS------   66 (139)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTT---------------TSCEEEEEEETTCCC------
T ss_pred             EEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccc---------------cccccccccccCccc------
Confidence            37899999999999999999999877655444433333332211               011111111111111      


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .    ....+..++++.++++.+.++.+...++++...+..   ..++||+|||||+|||++..
T Consensus        67 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          67 Y----KHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES---GFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             C----CCCSSEEEEEEEESCHHHHHHHHHHTTCCEEEECSS---SSEEEEECTTSCEEEEEEHH
T ss_pred             c----cCCCccceeeeehhhHHHHHHHHHHcCCceeeCCCC---cEEEEEECCCCCEEEEEECC
Confidence            1    122367799999999999999999999988877632   24689999999999999854

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.72  E-value=6e-17  Score=105.76  Aligned_cols=108  Identities=21%  Similarity=0.323  Sum_probs=73.9

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++||+++|||++.....  .  .  .++..+                   +..+.+.........+    
T Consensus         9 ~l~v~d~~~~~~FY~~vLG~~~~~~~~--~--~--~~~~~~-------------------~~~~~l~~~~~~~~~~----   59 (140)
T d1npba_           9 TLAVSDLQKSVTFWHELLGLTLHARWN--T--G--AYLTCG-------------------DLWVCLSYDEARQYVP----   59 (140)
T ss_dssp             EEEESCHHHHHHHHHTTSCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECTTCCCCC----
T ss_pred             EEEeCCHHHHHHHHHHHhCCEEEEEec--c--c--cccccc-------------------cccceeecccccccCC----
Confidence            378999999999999999999987643  1  1  122221                   1233333222211110    


Q ss_pred             CCCCCCCCCCcceEEEEe--CCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v--~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                           ....+..|++|.+  +|+++++++|+++|+++...+..+  ++.+||+|||||.|||.+..
T Consensus        60 -----~~~~~~~h~~~~~~~~d~~~~~~~l~~~Gv~~~~~~~~~--~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          60 -----PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSE--GASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             -----GGGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCSS--SEEEEEECTTCCEEEEEECC
T ss_pred             -----CcCCccceeeeechHHHHHHHHHHHHHCCCeEeecCCCC--ceEEEEECCCCCEEEEEECC
Confidence                 1123567888888  579999999999999998766432  45689999999999997753

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.71  E-value=1.6e-16  Score=101.16  Aligned_cols=104  Identities=16%  Similarity=0.258  Sum_probs=71.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|+++|++||++ |||++.....    .+..  +...                   ...+.+........       
T Consensus         8 l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~--~~~~-------------------~~~~~~~~~~~~~~-------   54 (120)
T d1ecsa_           8 LPSRDFDSTAAFYER-LGFGIVFRDA----GWMI--LQRG-------------------DLMLEFFAHPGLDP-------   54 (120)
T ss_dssp             EEESCHHHHHHHHHT-TTCEEEEECS----SEEE--EEET-------------------TEEEEEEECTTCCG-------
T ss_pred             EEeCCHHHHHHHHHH-cCCeeEEecC----ceee--eecc-------------------eecccccccccccc-------
Confidence            789999999999987 9999987532    1221  2111                   23444543322111       


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC-------CCccc-ceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-------DGGKL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~-------~~~~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                            .....++++.++|+++++++++++|+.+...+       ....+ .+.+||+|||||+|||+|..
T Consensus        55 ------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          55 ------LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             ------GGCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             ------CCCCcEEEEEECCHHHHHHHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence                  11345899999999999999999998875433       22222 36789999999999999864

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.70  E-value=1.9e-16  Score=102.63  Aligned_cols=104  Identities=19%  Similarity=0.250  Sum_probs=72.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|++++++||+++||+++..+.+  .  .  .++..+                   ...+..........      
T Consensus         9 ~l~v~d~~~~~~FY~~~lG~~~~~~~~--~--~--~~~~~~-------------------~~~~~~~~~~~~~~------   57 (134)
T d1nkia_           9 TLAVADLPASIAFYRDLLGFRLEARWD--Q--G--AYLELG-------------------SLWLCLSREPQYGG------   57 (134)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECTTCCC------
T ss_pred             EEEeCCHHHHHHHHHHhhCCeEEEecc--c--e--eeeecC-------------------CeEEEEeeeccccc------
Confidence            378999999999999999999887643  1  1  122221                   34455543222111      


Q ss_pred             CCCCCCCCCCcceEEEEe--CCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v--~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                            ...+..|++|.+  +|+++++++|+++|+++...+..+  ++.+||+|||||.|||...
T Consensus        58 ------~~~~~~h~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~--~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          58 ------PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSE--GDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ------CCSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCSS--SCEEEEECTTCCEEEEESC
T ss_pred             ------cccccccchhccccchHHHHHHHHHHCCCcCccCCCcc--eeEEEEECCCCCEEEEEEC
Confidence                  112445666666  589999999999999987765432  4468999999999999774

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.69  E-value=4.9e-17  Score=105.54  Aligned_cols=102  Identities=18%  Similarity=0.311  Sum_probs=74.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++..+..  +    .+++..++.                 ...+.+..  ++         
T Consensus        10 i~v~Dl~~s~~FY~~vLG~~~~~~~~--~----~~~l~~~~~-----------------~~~l~~~~--~~---------   55 (132)
T d1kw3b1          10 FAVKDVPAWDHFLTKSVGLMAAGSAG--D----AALYRADQR-----------------AWRIAVQP--GE---------   55 (132)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSB-----------------SCSEEEEE--CT---------
T ss_pred             EEeCCHHHHHHHHHHHhCCceecccc--c----eeeeeeeec-----------------ceeeeeec--cC---------
Confidence            78999999999999999999987642  1    244554332                 23344432  11         


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCcc----cceEEEEECCCCCEEEEecc
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGK----LKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~----~~~~~~~~DPdG~~iel~~~  143 (153)
                            ..+..|++|.++   |++++.++++++|+++...+....    ..+.+||+|||||+|||+-.
T Consensus        56 ------~~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          56 ------LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             ------TCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             ------CCCceEEEEEeccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence                  126789999996   588899999999999997663211    12468999999999999853

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.69  E-value=4.5e-16  Score=102.42  Aligned_cols=106  Identities=20%  Similarity=0.304  Sum_probs=73.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++.....  +  . ..+.+.+..                ....+.+..  +.         
T Consensus        22 l~v~Dl~~s~~FY~~~lG~~~~~~~~--~--~-~~~~~~~~~----------------~~~~~~~~~--~~---------   69 (146)
T d1f1ua1          22 IVVTDLAKSREFYVDVLGLHVTEEDE--N--T-IYLRSLEEF----------------IHHNLVLRQ--GP---------   69 (146)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEECS--S--E-EEEECTTCC----------------SSCSEEEEE--CS---------
T ss_pred             EEeCCHHHHHHHHHhccCcEEEeecC--C--c-eeeeccccc----------------ccceeeccc--cC---------
Confidence            78999999999999999999997632  1  1 122222110                012222211  11         


Q ss_pred             CCCCCCCCCcceEEEEeC---CHHHHHHHHHhcCCeEeecCCCccc--ceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~---di~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~  145 (153)
                            ..++.|++|.+.   |+++++++|+++|+++...+.....  +..+||+|||||.|||+....
T Consensus        70 ------~~~~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e  132 (146)
T d1f1ua1          70 ------IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  132 (146)
T ss_dssp             ------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             ------CCCCceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEecc
Confidence                  126789999997   5899999999999999876643322  357899999999999988543

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.68  E-value=2.3e-16  Score=102.40  Aligned_cols=115  Identities=10%  Similarity=-0.032  Sum_probs=72.1

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccE-------EEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-------SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   74 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   74 (153)
                      |.|.|+++|++||+++||+++..+...++...       ..+.+..                   ++..+.+........
T Consensus        13 v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~-------------------~~~~~~~~~~~~~~~   73 (135)
T d1xy7a_          13 VEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNL-------------------AGSSFVVCDVSSLPG   73 (135)
T ss_dssp             ECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEE-------------------TTEEEEEEEGGGSTT
T ss_pred             EECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEE-------------------CCeeeeccccccccc
Confidence            34569999999999999999987655332211       1111111                   123344433211110


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEec
Q 031774           75 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~  142 (153)
                      .     .  .........+|++.++|++++++++.++|+++..++...+++ +.++|+||+|+.|+|.|
T Consensus        74 ~-----~--~~~~~~~~~~l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          74 F-----S--TAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             C-----C--CCCTTSCCCEEEEECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             c-----c--cCCCCCcceEEEEeecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            0     0  011112346999999999999999999999999998765554 57899999999999975

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.68  E-value=1.5e-16  Score=101.20  Aligned_cols=104  Identities=12%  Similarity=0.024  Sum_probs=73.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|+++|++||+++|||++.....    .+  +++..+                   +..+.+.......       
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~--~~~~~~-------------------~~~l~l~~~~~~~-------   57 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----DF--AGVRRG-------------------DIRLHISRTEHQI-------   57 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----SE--EEEEET-------------------TEEEEEEECSCHH-------
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----ce--eEeeee-------------------eeeeeeecccccc-------
Confidence            378999999999999999999887532    12  223221                   4566665432111       


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCC--------CcccceEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD--------GGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~--------~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                             .....++.+.++|++++++++++++......+.        ...+++.+||+|||||+|||.+.
T Consensus        58 -------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          58 -------VADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             -------HHTTCEEEEEESCHHHHHHHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             -------ccceeEEEEeechhHHHHHHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence                   113468999999999999999999877654331        12224689999999999999763

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.68  E-value=9.9e-18  Score=112.49  Aligned_cols=128  Identities=17%  Similarity=0.092  Sum_probs=87.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCc--cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC--C
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP--D   77 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~--~   77 (153)
                      |.|+|+++|++||+++|||+++.....+..  ....+.++.+                   ...+++.....+....  .
T Consensus        13 i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~-------------------~~~i~l~~~~~~~~~~~~~   73 (163)
T d1t47a1          13 FAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-------------------SARFVLTSVIKPATPWGHF   73 (163)
T ss_dssp             EECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEESSCCSHHHHH
T ss_pred             EEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC-------------------CEEEEEeccCCCCCccccc
Confidence            789999999999999999999987643322  2333344432                   4567776543322110  0


Q ss_pred             CCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCc--ccc--eEEEEECCCCCEEEEeccCcccccC
Q 031774           78 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLK--GVAFIKDPDDYWIEIFDLKTIGKIG  150 (153)
Q Consensus        78 ~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~--~~~--~~~~~~DPdG~~iel~~~~~~~~~~  150 (153)
                      ..++..  ....|+.||||.|+|+++++++|+++|+++..+|...  ..+  ..+++++|+|..++|+|+...+..+
T Consensus        74 ~~~~~~--~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~~g~f  148 (163)
T d1t47a1          74 LADHVA--EHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPY  148 (163)
T ss_dssp             HHHHHH--HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSS
T ss_pred             cchhhh--cCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCCCCcc
Confidence            000000  1124889999999999999999999999999887432  112  3788999999999999976654443

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=4.3e-17  Score=107.68  Aligned_cols=124  Identities=13%  Similarity=0.120  Sum_probs=83.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCc--cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK   79 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~   79 (153)
                      |.|+|+++|++||+++|||+.......+..  ......+..                   +...+++.........+..+
T Consensus        17 i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~l~~~~~~~~~~~~~   77 (149)
T d1sqia1          17 FWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQ-------------------GKIVFVLCSALNPWNKEMGD   77 (149)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEE-------------------TTEEEEEEEESSTTCHHHHH
T ss_pred             EEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecC-------------------CcEEEEEEeccCCCCchhhh
Confidence            689999999999999999999887654322  222233332                   24566665433322211000


Q ss_pred             CCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCc--ccc--eEEEEECCCCCEEEEeccCccc
Q 031774           80 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLK--GVAFIKDPDDYWIEIFDLKTIG  147 (153)
Q Consensus        80 ~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~--~~~--~~~~~~DPdG~~iel~~~~~~~  147 (153)
                       ..  ...+.|+.||||.|+|+++++++|+++|+++..+|...  ..+  .+++++.|.|..++|+|+....
T Consensus        78 -~~--~~~g~G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~  146 (149)
T d1sqia1          78 -HL--VKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYT  146 (149)
T ss_dssp             -HH--HHHCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             -hh--hhCCCeEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCc
Confidence             00  01134899999999999999999999999999887431  112  3567888888999999976543

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.67  E-value=7.5e-16  Score=97.42  Aligned_cols=103  Identities=11%  Similarity=0.084  Sum_probs=71.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      +|.|+|+++|++||+++|||++..+..  .  +  .++..+                   ...+.+.......       
T Consensus         9 vL~v~D~~~s~~FY~~~LG~~~~~~~~--~--~--~~~~~~-------------------~~~l~~~~~~~~~-------   56 (120)
T d1xrka_           9 VLTARDVAEAVEFWTDRLGFSRVFVED--D--F--AGVVRD-------------------DVTLFISAVQDQV-------   56 (120)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEECS--S--E--EEEEET-------------------TEEEEEEECSCTT-------
T ss_pred             EEEECCHHHHHHHHHHhhCCeEEEECC--C--e--eEEecc-------------------cceeecccccccc-------
Confidence            378999999999999999999987643  1  2  222221                   3455554332211       


Q ss_pred             CCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEee--------cCCCcccceEEEEECCCCCEEEEec
Q 031774           81 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK--------KPDGGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~--------~~~~~~~~~~~~~~DPdG~~iel~~  142 (153)
                             +.+..++.+.+++++..++.+.+++.....        ++....+++.+||+|||||.|||+.
T Consensus        57 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          57 -------VPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             -------TGGGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             -------CCCCceEEEeeccHHHHHHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence                   124568899999999999988877654432        3333344568999999999999975

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.66  E-value=6.4e-16  Score=101.26  Aligned_cols=106  Identities=20%  Similarity=0.340  Sum_probs=70.0

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      |.|+|++++++||+++|||++..+..  ...+..  ...+..                ....+.+...  ..        
T Consensus        13 l~v~D~~~s~~FY~~vLG~~~~~~~~--~~~~~~--~~~~~~----------------~~~~~~~~~~--~~--------   62 (145)
T d1mpya1          13 LRVLDMSKALEHYVELLGLIEMDRDD--QGRVYL--KAWTEV----------------DKFSLVLREA--DE--------   62 (145)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEECT--TSCEEE--ECTTCC----------------BSCSEEEEEC--SS--------
T ss_pred             EEeCCHHHHHHHHHHhhCCEEEEeec--cCccce--eccccc----------------ceeecccccc--Cc--------
Confidence            78999999999999999999987643  211211  111110                0122223211  10        


Q ss_pred             CCCCCCCCCcceEEEEe---CCHHHHHHHHHhcCCeEeecCCCcc--cceEEEEECCCCCEEEEeccC
Q 031774           82 HNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v---~di~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~  144 (153)
                             .+..|+++.+   +|+++++++|+++|+++...|....  .++.+||+|||||.|||+...
T Consensus        63 -------~~~~~~~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~  123 (145)
T d1mpya1          63 -------PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADK  123 (145)
T ss_dssp             -------CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             -------ccceeeeeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEec
Confidence                   1345666665   4799999999999999887664322  235899999999999999743

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.65  E-value=5.7e-16  Score=103.21  Aligned_cols=110  Identities=20%  Similarity=0.196  Sum_probs=72.0

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecC---CccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP---EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   77 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   77 (153)
                      .|.|+|++++++||+++|||++......+   .......++..+..                 .+.+.+..  .+     
T Consensus        15 ~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~h~~a~~~--~~-----   70 (156)
T d1kw3b2          15 VRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR-----------------HHTIALAA--FP-----   70 (156)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEEC--CS-----
T ss_pred             EEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc-----------------cceeeecc--CC-----
Confidence            37899999999999999999987654321   22233445544321                 22333321  11     


Q ss_pred             CCCCCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCC-EEEEecc
Q 031774           78 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDY-WIEIFDL  143 (153)
Q Consensus        78 ~~~~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~-~iel~~~  143 (153)
                               .+.+++|++|+|++   +.+++++|+++|+.+..+...+.. ..++|++||||| .+|+.-.
T Consensus        71 ---------~~~gl~Hiaf~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          71 ---------IPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             ---------CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             ---------CCCceeEEEEECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence                     12378999999986   556789999999865443322221 247999999998 5898653

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.65  E-value=5.9e-16  Score=105.07  Aligned_cols=109  Identities=17%  Similarity=0.235  Sum_probs=75.2

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      .|.|+|++++++|| ++|||++......+......+++..+..                 ...+.+...  +        
T Consensus        10 ~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~-----------------~~~l~~~~~--~--------   61 (176)
T d1f1ua2          10 NQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT-----------------VHDTALTGG--N--------   61 (176)
T ss_dssp             EEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS-----------------SCSEEEEES--S--------
T ss_pred             EEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc-----------------ccceecccc--c--------
Confidence            37899999999999 6899999887665555555566665432                 234444321  1        


Q ss_pred             CCCCCCCCCCcceEEEEeCC---HHHHHHHHHhcCCeEe--ecCC-Cccc-ceEEEEECCCCCEEEEeccC
Q 031774           81 YHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFA--KKPD-GGKL-KGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~d---i~~~~~~l~~~G~~~~--~~~~-~~~~-~~~~~~~DPdG~~iel~~~~  144 (153)
                             ..+.+|++|.+.+   +.++.++|+++|+...  ..|. .+.. ..++||+|||||+|||....
T Consensus        62 -------~~~~~H~~f~~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~  125 (176)
T d1f1ua2          62 -------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  125 (176)
T ss_dssp             -------BSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             -------CCCccceeEEeccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCC
Confidence                   1267899999986   5566778999998543  3332 1111 24789999999999998743

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=1.6e-15  Score=101.81  Aligned_cols=125  Identities=18%  Similarity=0.126  Sum_probs=79.8

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCcc--EEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC----
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD----   75 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~----   75 (153)
                      |.|+|+++|++||+++|||++..+...+...  .....++.+                   ...+.+.........    
T Consensus        18 i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~v~~~~~~~~~~~~~~   78 (167)
T d1sqda1          18 FWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG-------------------DLRFLFTAPYSPSLSAGEI   78 (167)
T ss_dssp             EECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET-------------------TEEEEEEEECCGGGTTTCC
T ss_pred             EEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC-------------------CeeEEEecccccccccccc
Confidence            7899999999999999999999876543222  222222221                   122222111110000    


Q ss_pred             -CCCC-CCCCCC---------CCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCccc-ceEEEEECCCCCEEEEecc
Q 031774           76 -PDFK-GYHNGN---------SEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        76 -~~~~-~~~~~~---------~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~  143 (153)
                       .... ......         ....|+.||||.|+|+++++++|+++|+++..+|..... .+.++++.+.+.+++|+++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r  158 (167)
T d1sqda1          79 KPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSY  158 (167)
T ss_dssp             GGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEE
T ss_pred             ccccccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEec
Confidence             0000 000000         012489999999999999999999999999998854332 3467899999999999998


Q ss_pred             Cc
Q 031774          144 KT  145 (153)
Q Consensus       144 ~~  145 (153)
                      +.
T Consensus       159 ~~  160 (167)
T d1sqda1         159 KA  160 (167)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.57  E-value=6.8e-15  Score=99.33  Aligned_cols=126  Identities=14%  Similarity=0.063  Sum_probs=81.0

Q ss_pred             CeeecChhhhHHHHhhhcCCEEeEEeecCCcc--EEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC--
Q 031774            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP--   76 (153)
Q Consensus         1 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~--   76 (153)
                      .|.|+|++++++||+++|||++..+.......  .....++.+                   ...+.+..........  
T Consensus        18 ~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~   78 (172)
T d1sp8a1          18 ELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG-------------------SLSFLFTAPYAHGADAAT   78 (172)
T ss_dssp             EEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEECCSSCCGGG
T ss_pred             EEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC-------------------CeeeEEeeccCCCchhhh
Confidence            37899999999999999999999876543322  222223221                   2333332211111000  


Q ss_pred             CCCCCCCC-------CCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEeccCc
Q 031774           77 DFKGYHNG-------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        77 ~~~~~~~~-------~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~  145 (153)
                      ...+....       .....|+.||||+|+|+++++++|+++|+++..+|.....+ +.++++.|.+.+++|+++..
T Consensus        79 ~~~~~~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          79 AALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             CSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCT
T ss_pred             cccccCCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCC
Confidence            00000000       00124889999999999999999999999999888543333 46788888888899999765

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.38  E-value=2e-11  Score=78.89  Aligned_cols=124  Identities=12%  Similarity=-0.039  Sum_probs=72.3

Q ss_pred             eeec-ChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCC
Q 031774            2 FRIK-DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG   80 (153)
Q Consensus         2 l~v~-d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~   80 (153)
                      |... |.++|++||+++||+++.......+..........      ....+ ..+...-++..+.+... .+..     +
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~------~~~~i-~ha~l~i~g~~~~~~d~-~~~~-----~   74 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPAD------WKDKI-MHARLVVGSFALMASDN-HPAY-----P   74 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCS------SCCCE-EEEEEEETTEEEEEEEC-CTTS-----C
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCC------CCCeE-EEEEEEEcCeEEEeccc-CCcc-----c
Confidence            4455 89999999999999999887654432211000000      00000 00000001222222211 1110     0


Q ss_pred             CCCCCCCCCCcceEEEEeCCHH--HHHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEecc
Q 031774           81 YHNGNSEPRGFGHIGITVDDVY--KACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        81 ~~~~~~~~~g~~hl~f~v~di~--~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  143 (153)
                      .     ..++..++++.+++.+  +.+.++.++|+++..+|...+++ +.++|+||+|+.|+|...
T Consensus        75 ~-----~~~~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          75 Y-----EGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             C-----CCCCSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             c-----cCCCcEEEEEEcCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence            1     1124468899988654  55777888999999999776665 578899999999999754

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.29  E-value=1.7e-12  Score=85.51  Aligned_cols=114  Identities=16%  Similarity=0.097  Sum_probs=74.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY   81 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~~~~~   81 (153)
                      +.|+|++++.+||++ |||+...+....  ...  .++.                   +.  +.+.....+.+ + ...+
T Consensus        15 fav~d~~~~~~~~~~-lGF~~~~~~~~~--~~~--l~~~-------------------G~--i~ll~~~~~~s-~-~~~~   66 (150)
T d1cjxa1          15 FASPTPGTLEPIFEI-MGFTKVATHRSK--NVH--LYRQ-------------------GE--INLILNNEPNS-I-ASYF   66 (150)
T ss_dssp             EECSSTTSSHHHHHH-TTCEEEEEESSS--SEE--EEEE-------------------TT--EEEEEECCSSS-H-HHHH
T ss_pred             EecCCHHHHHHHHHH-hCCEEEecccce--EEE--EEec-------------------Cc--EEEEecCCCCC-H-hHhH
Confidence            579999999999975 999999875422  111  1221                   12  23322222211 1 0011


Q ss_pred             CCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEeccCc
Q 031774           82 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  145 (153)
Q Consensus        82 ~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  145 (153)
                      ..  ....|+.|+||+|+|++++++++.++|+++...+..........+++|+|.++.|+++..
T Consensus        67 ~~--~hg~gv~hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          67 AA--EHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             HH--HHSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCCS
T ss_pred             Hh--hCCCceEEEEEEeCCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECcCC
Confidence            11  112489999999999999999999999998876633111235678999999999999754

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.14  E-value=3.3e-11  Score=82.98  Aligned_cols=99  Identities=15%  Similarity=0.275  Sum_probs=61.9

Q ss_pred             eeec--ChhhhHHHHhhhcCCEEeEEeecCCccEEEE--EeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 031774            2 FRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLY--FLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   77 (153)
Q Consensus         2 l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   77 (153)
                      +.|+  |+++++.||+++|||+.....+.++....+.  .+..+.                 +...+.+........++ 
T Consensus        11 ~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~-----------------~~~~~~l~~~~~~~~sq-   72 (203)
T d1cjxa2          11 HNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD-----------------GMIRIPLNEESSKGAGQ-   72 (203)
T ss_dssp             EECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT-----------------SSCEEEEEEECTTCCSH-
T ss_pred             eccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccc-----------------cccceecccCCCCCccH-
Confidence            5676  8999999999999999998765443332222  222211                 13444443322211110 


Q ss_pred             CCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC
Q 031774           78 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  119 (153)
Q Consensus        78 ~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  119 (153)
                      ...+... ....|++||||.|+||.+++++|+++|++++..|
T Consensus        73 i~~fl~~-~~g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          73 IEEFLMQ-FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             HHHHHHH-HTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             HHHHHHh-cCCCCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            0001100 0124899999999999999999999999998765

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.07  E-value=9e-09  Score=65.99  Aligned_cols=107  Identities=7%  Similarity=0.015  Sum_probs=64.7

Q ss_pred             cChhhhHHHHhhhcCCEEeEEeec-------CCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCCC
Q 031774            5 KDPKVSLDFYSRVLGMSLLKRLDF-------PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD   77 (153)
Q Consensus         5 ~d~~~a~~FY~~~lG~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~   77 (153)
                      .|.++|++||+++||...+.....       +++....+-+..+                   +..|-+........   
T Consensus        15 ~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~-------------------~~~i~~~d~~~~~~---   72 (134)
T d1u7ia_          15 VQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG-------------------DQSVHCIDSHVRHA---   72 (134)
T ss_dssp             SCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEEEEESSCCS---
T ss_pred             cCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC-------------------CEEEEEecCCCCCC---
Confidence            378999999999999876654321       1112222222221                   33444432211110   


Q ss_pred             CCCCCCCCCCCCCcceEEEEeCCHHHH--HHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEe
Q 031774           78 FKGYHNGNSEPRGFGHIGITVDDVYKA--CERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  141 (153)
Q Consensus        78 ~~~~~~~~~~~~g~~hl~f~v~di~~~--~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~  141 (153)
                         .     ...+...+++.+++.++.  +.+..++|.++..++.+..++ +...++||+|+.|.|.
T Consensus        73 ---~-----~~~~~~s~~l~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          73 ---F-----DFTPAFSFFVDCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             ---C-----CCCTTEEEEEECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEE
T ss_pred             ---C-----CCCCceEEEEEeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEE
Confidence               1     112335788888764433  555567788999888766554 5678999999999985

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.04  E-value=2.7e-10  Score=77.99  Aligned_cols=100  Identities=14%  Similarity=0.212  Sum_probs=60.2

Q ss_pred             eeec--ChhhhHHHHhhhcCCEEeEEeec-----CCccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 031774            2 FRIK--DPKVSLDFYSRVLGMSLLKRLDF-----PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   74 (153)
Q Consensus         2 l~v~--d~~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   74 (153)
                      +.|+  ++++++.||+++|||+.......     +...+...-+...                 .+...+.+........
T Consensus        12 ~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~-----------------~~~v~l~lne~~~~~~   74 (199)
T d1t47a2          12 GNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG-----------------TLKVKFPINEPALAKK   74 (199)
T ss_dssp             EECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECT-----------------TSCSEEEEEEECCSSS
T ss_pred             eccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecccc-----------------ccccceeecccCcccc
Confidence            4566  99999999999999998865432     1222211112211                 1134454433211111


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC
Q 031774           75 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  119 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  119 (153)
                      ......+... ....|++||||.|+||.+++++|+++|++++..|
T Consensus        75 ~s~i~~FL~~-~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          75 KSQIDEYLEF-YGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             CCHHHHHHHH-HTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             ccchhhhhhh-cCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            0000001000 1124899999999999999999999999999887

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.02  E-value=1.9e-10  Score=80.23  Aligned_cols=100  Identities=11%  Similarity=0.214  Sum_probs=59.7

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCC-----ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCCC
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP   76 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~   76 (153)
                      +.|+|++++++||+++|||+...+....+     ..+....+..                 ..+...+.+.....+....
T Consensus        15 i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~-----------------~~g~v~~~l~E~~~~~~~~   77 (224)
T d1sp8a2          15 GNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLAN-----------------NSENVLLPLNEPVHGTKRR   77 (224)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEEC-----------------SSSCCEEEEEEECCCSSSC
T ss_pred             EeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEc-----------------CCCccceeeeeecCCCCCc
Confidence            67999999999999999999887654221     1122222222                 1224566665443322110


Q ss_pred             C-CCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcC----CeEeecC
Q 031774           77 D-FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG----VEFAKKP  119 (153)
Q Consensus        77 ~-~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G----~~~~~~~  119 (153)
                      + ...+... ....|++||||.|+||.+++++|+++|    ++++..|
T Consensus        78 s~i~~FL~~-~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          78 SQIQTFLDH-HGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             CHHHHHHHH-HTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             cHHHHHHHh-ccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            0 0001000 012489999999999999999999875    4555544

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=8.5e-10  Score=76.04  Aligned_cols=100  Identities=13%  Similarity=0.242  Sum_probs=58.0

Q ss_pred             eeecC--hhhhHHHHhhhcCCEEeEEeecCC-----ccEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCC
Q 031774            2 FRIKD--PKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES   74 (153)
Q Consensus         2 l~v~d--~~~a~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~   74 (153)
                      +.|++  ++++++||+++|||+........+     ..+....+..                 ..+...+.+........
T Consensus        30 ~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s-----------------~~~~i~~~lne~~~~~~   92 (210)
T d1sqia2          30 GNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVAN-----------------YEESIKMPINEPAPGRK   92 (210)
T ss_dssp             EECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEEC-----------------TTSCCEEEEEECC----
T ss_pred             eccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEe-----------------cCccccccccccCCCCc
Confidence            45776  999999999999999875432111     1111111221                 11234555543211111


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCCeEeecC
Q 031774           75 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  119 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  119 (153)
                      ......+... ....|++||||.|+||.+++++|+++|+.++..|
T Consensus        93 ~sqi~~fl~~-~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P  136 (210)
T d1sqia2          93 KSQIQEYVDY-NGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP  136 (210)
T ss_dssp             -CHHHHHHHH-HTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCC
T ss_pred             ccHHHHHHhh-cCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            0000001000 1124899999999999999999999999999777

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.68  E-value=3.7e-07  Score=57.87  Aligned_cols=51  Identities=10%  Similarity=-0.041  Sum_probs=36.6

Q ss_pred             ceEEEEeCCHHH---HHHHHHhcCCeEeecCCCcccc-eEEEEECCCCCEEEEecc
Q 031774           92 GHIGITVDDVYK---ACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        92 ~hl~f~v~di~~---~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~  143 (153)
                      .++++.+++.++   +.++| ++|.++..++...+++ +...++||.|+.|.|..+
T Consensus        74 ~s~~v~~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          74 ISLFVTVKDTIEMERLFNGL-KDEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CCEEEECSSHHHHHHHHHHH-HTTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEeccCCHHHHHHHHHHh-ccCCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            367788887554   44555 5667888887665554 467799999999999654

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.68  E-value=7.4e-09  Score=72.19  Aligned_cols=94  Identities=9%  Similarity=0.207  Sum_probs=54.6

Q ss_pred             eeecChhhhHHHHhhhcCCEEeEEeecCCc-----cEEEEEeeccCCCCCCCCcccceeeecCCCcEEEEEeccCCCCC-
Q 031774            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-----KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD-   75 (153)
Q Consensus         2 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~-   75 (153)
                      +.|+|++++++||.++||+.........+.     .+....+..                 ..+...+.+.....+... 
T Consensus        28 iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s-----------------~~g~v~~~l~E~~~~~~~~   90 (230)
T d1sqda2          28 GNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLAS-----------------NDEMVLLPINEPVHGTKRK   90 (230)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEEC-----------------TTSCSEEEEEEECCC---C
T ss_pred             ecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccC-----------------CCcccceeEEeecCCCCCc
Confidence            678999999999999999998876542221     111111111                 122456666543222211 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEeCCHHHHHHHHHhcCC
Q 031774           76 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV  113 (153)
Q Consensus        76 ~~~~~~~~~~~~~~g~~hl~f~v~di~~~~~~l~~~G~  113 (153)
                      .....+... ....|++||||.|+||.+++++|+++|.
T Consensus        91 sqi~~FL~~-~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          91 SQIQTYLEH-NEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             CHHHHHHHH-HTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             chHHHHHhh-ccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence            000001000 1124999999999999999999999743

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.42  E-value=0.0038  Score=40.08  Aligned_cols=43  Identities=12%  Similarity=0.011  Sum_probs=31.8

Q ss_pred             ceEEEEeCC---HHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEecc
Q 031774           92 GHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        92 ~hl~f~v~d---i~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      .+|++.++|   +++++++|.+.| .+..+     +   ..++|+.|..|.|+.+
T Consensus        74 ~sl~l~~d~~eE~d~~f~~LsegG-~~~~~-----~---G~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          74 FSFQVATDDQAETDRLWNAIVDNG-GEESA-----C---GWCRDKWGISWQITPR  119 (156)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTT-CEECS-----T---TEEECTTSCEEEEEEH
T ss_pred             eEEEEecCCHHHHHHHHHHHhccC-CCCCC-----C---eEEECCCCCEEEeChH
Confidence            589999986   667778877665 33332     2   2589999999999975

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=96.20  E-value=0.021  Score=33.46  Aligned_cols=55  Identities=25%  Similarity=0.460  Sum_probs=42.7

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccceEEEEECCCCCEEEEeccCcccc
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK  148 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  148 (153)
                      ++.|+.+.|+|++++.+-.++ .|.++.....    ...+++.++++..+.+.+......
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~   58 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG----NAFAVMRDNDGFILTLMKGKEVQY   58 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET----TTEEEEECTTCCEEEEEECSSCCC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeec----Ccceeeeecceeeeeeeeeecccc
Confidence            678999999999999998887 7998876542    224667888899999988655433

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=94.19  E-value=0.12  Score=31.42  Aligned_cols=55  Identities=20%  Similarity=0.391  Sum_probs=39.5

Q ss_pred             CCcceEEEEeCCHHHHHHHHHhcCCeEeecCC-C-----------cccceEEEEECCCC-CEEEEecc
Q 031774           89 RGFGHIGITVDDVYKACERFERLGVEFAKKPD-G-----------GKLKGVAFIKDPDD-YWIEIFDL  143 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~-~-----------~~~~~~~~~~DPdG-~~iel~~~  143 (153)
                      .++.|+++.|+|++++.+-.++.|.++..... .           ......+++..++| ..+++++.
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~   75 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   75 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             CEEeEEEEEeCCHHHHHHHHHHcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEee
Confidence            37899999999999999999999988774321 1           11123667777775 57777663

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=93.03  E-value=0.13  Score=32.29  Aligned_cols=56  Identities=9%  Similarity=0.249  Sum_probs=37.9

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCCC--cccceEEEEECCCCCEEEEeccC
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~--~~~~~~~~~~DPdG~~iel~~~~  144 (153)
                      .++.|++|.|.|++++.+..++ .|.++......  .......++....+..++|.+..
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~   64 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVI   64 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEES
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccC
Confidence            3789999999999999999985 79988743311  11122234334456677777754

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.65  E-value=0.14  Score=31.53  Aligned_cols=54  Identities=13%  Similarity=0.125  Sum_probs=34.6

Q ss_pred             CcceEEEEeCCHHHHHHHHH-hcCCeEeecCCC--cccceEEEEECCCCCEEEEecc
Q 031774           90 GFGHIGITVDDVYKACERFE-RLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDL  143 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~-~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iel~~~  143 (153)
                      +++|++|.|.|++++.+-.. ..|.+.......  +......+...-.+..+++.+.
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   67 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSA   67 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEec
Confidence            78999999999999999885 579988754321  1112222223334556666553

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=90.53  E-value=0.38  Score=28.74  Aligned_cols=30  Identities=27%  Similarity=0.329  Sum_probs=26.4

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKP  119 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~  119 (153)
                      ++.|++|.|+|++++.+-.++ .|+++....
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~   34 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTT   34 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecC
Confidence            678999999999999999998 599887654

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=90.47  E-value=0.44  Score=28.70  Aligned_cols=31  Identities=19%  Similarity=0.395  Sum_probs=26.8

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecC
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKP  119 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~  119 (153)
                      .|++|+++.|.|++++.+-.++ .|.++....
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~   36 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRVKMT   36 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeEeee
Confidence            4899999999999999999987 899887543

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=90.00  E-value=0.5  Score=28.16  Aligned_cols=56  Identities=7%  Similarity=0.102  Sum_probs=36.6

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecCCCcccc-eEEEEE-----CCCCCEEEEeccC
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLK-GVAFIK-----DPDDYWIEIFDLK  144 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~~~~~~-~~~~~~-----DPdG~~iel~~~~  144 (153)
                      .+++|+++.|+|++++.+-.++ .|.+..........+ ...+..     ...+..+|+++..
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~   68 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPL   68 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEES
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhh
Confidence            4889999999999999999876 677765433211111 122222     3456788888754

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=88.18  E-value=0.41  Score=25.82  Aligned_cols=28  Identities=14%  Similarity=0.190  Sum_probs=24.6

Q ss_pred             cceEEEEeCCHHHHHHHHHhcCCeEeec
Q 031774           91 FGHIGITVDDVYKACERFERLGVEFAKK  118 (153)
Q Consensus        91 ~~hl~f~v~di~~~~~~l~~~G~~~~~~  118 (153)
                      ...+.|.++|.+.+.+.|+++|+++...
T Consensus        38 ~~~~vl~vdd~~~a~~~L~~~G~~vl~~   65 (71)
T d2f06a1          38 VANVVIRPSNMDKCIEVLKEKKVDLLAA   65 (71)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCEEECH
T ss_pred             cEEEEEEECCHHHHHHHHHHCCCEEEch
Confidence            3578899999999999999999998753

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=87.52  E-value=0.55  Score=27.60  Aligned_cols=50  Identities=16%  Similarity=0.202  Sum_probs=34.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcccceEEEEECCCCCEEEEec
Q 031774           90 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  142 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  142 (153)
                      ++.|+++.|.|+++..+-.++.|..+.......   ..+.+.-+.+..+.+.+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~---~~~~~~~~~~~~~~~~~   51 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSA---PHTEAVLDGGIRLAWDT   51 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTTGGGC---SEEEEECGGGCEEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCccccccccc---cceeeeccceeeeeecc
Confidence            567999999999999999988887665433211   22445555666666544

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.49  E-value=0.45  Score=30.13  Aligned_cols=54  Identities=13%  Similarity=0.145  Sum_probs=34.9

Q ss_pred             CcceEEEEeCCHHHHHHHHHhcCCeEeecCCCcc-cceEEEE-ECCCCCEEEEecc
Q 031774           90 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFI-KDPDDYWIEIFDL  143 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~-~DPdG~~iel~~~  143 (153)
                      ++.|+++.|.|+++..+-.+..|.++........ .....++ .+...+.+.+...
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~   60 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGG   60 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEES
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEEEEEecCCcceeeeeeccCccccceecccc
Confidence            6789999999999999888889999875332111 1112222 3455555555543

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.96  E-value=0.79  Score=28.41  Aligned_cols=30  Identities=33%  Similarity=0.585  Sum_probs=26.1

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeec
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKK  118 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~  118 (153)
                      .+++|++|.|.|++++.+-.++ .|.+....
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~   41 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAK   41 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEE
Confidence            4889999999999999999975 89987643

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=84.64  E-value=1.4  Score=25.64  Aligned_cols=54  Identities=20%  Similarity=0.316  Sum_probs=33.6

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecCC-Ccc-cceEEEEECCCCCEEEEeccC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGK-LKGVAFIKDPDDYWIEIFDLK  144 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~~-~~~-~~~~~~~~DPdG~~iel~~~~  144 (153)
                      |+.|+.+.|.|++++.+-..+ .|.++..... ... .....++ ...+..+++.+..
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   60 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFF-LIGDIWVAIMQGE   60 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEE-EETTEEEEEEECC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEE-ecCCEEEeecccc
Confidence            689999999999999888775 6888774331 111 1122332 3345566665543

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=83.00  E-value=0.69  Score=28.60  Aligned_cols=30  Identities=30%  Similarity=0.433  Sum_probs=26.0

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeec
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKK  118 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~  118 (153)
                      .|+.|+++.|+|++++.+-.++ .|.++...
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~   39 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDI   39 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeE
Confidence            5899999999999999998885 89988643

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=82.24  E-value=1.8  Score=25.61  Aligned_cols=30  Identities=23%  Similarity=0.307  Sum_probs=26.4

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKP  119 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~  119 (153)
                      ++.|+++.|+|+++..+-.++ .|.++....
T Consensus         4 ~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~   34 (132)
T d1kw3b1           4 RLGYLGFAVKDVPAWDHFLTKSVGLMAAGSA   34 (132)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHHhCCceeccc
Confidence            688999999999999999998 599887654

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=81.95  E-value=1.5  Score=27.31  Aligned_cols=29  Identities=31%  Similarity=0.448  Sum_probs=25.4

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEee
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAK  117 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~  117 (153)
                      .+++|++|.|.|++++.+-... .|.++..
T Consensus        12 ~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~   41 (172)
T d1sp8a1          12 LAFHHVELWCADAASAAGRFSFGLGAPLAA   41 (172)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEE
T ss_pred             CEEEEEEEEeCCHHHHHHHHHHhhCceEEE
Confidence            4889999999999999999875 8998874

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=81.83  E-value=2.1  Score=26.62  Aligned_cols=31  Identities=19%  Similarity=0.392  Sum_probs=27.3

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-cCCeEeecC
Q 031774           89 RGFGHIGITVDDVYKACERFER-LGVEFAKKP  119 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~  119 (153)
                      .|++|+++.|.|+++..+-.+. .|.++....
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~   42 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRN   42 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeec
Confidence            4899999999999999999887 699888664

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=80.57  E-value=2.6  Score=24.79  Aligned_cols=30  Identities=20%  Similarity=0.432  Sum_probs=26.1

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-cCCeEeecC
Q 031774           90 GFGHIGITVDDVYKACERFER-LGVEFAKKP  119 (153)
Q Consensus        90 g~~hl~f~v~di~~~~~~l~~-~G~~~~~~~  119 (153)
                      ++.|+++.|+|++++.+-.++ .|.++....
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~   34 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARW   34 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCEEEEEe
Confidence            789999999999999999886 799887554

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=80.15  E-value=0.3  Score=30.37  Aligned_cols=31  Identities=19%  Similarity=0.156  Sum_probs=27.3

Q ss_pred             CCcceEEEEeCCHHHHHHHHHhcCCeEeecC
Q 031774           89 RGFGHIGITVDDVYKACERFERLGVEFAKKP  119 (153)
Q Consensus        89 ~g~~hl~f~v~di~~~~~~l~~~G~~~~~~~  119 (153)
                      .|+.|+.|.|+|++++.+.+++.|......-
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~lGF~~~~~~   38 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEIMGFTKVATH   38 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHHTTCEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHHhCCEEEecc
Confidence            4899999999999999999999999877543