Citrus Sinensis ID: 031776


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
MDATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKYKEQGSYWSSVQVGRKSQLLLLVWPVLILPIQNPSM
ccccccEEEEEEccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHccccHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEccEEEEEcccccc
ccccccEEEEEcHHHHHHHHHHHcccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccHHHEcccccccc
MDATLTKVFIWDMDETLILLKSLLNgtfaqsfndlkdadkgvqigRMWENHILNVcdecffyeqiennntpfldalkqyddgrdlsdyefdrdglcppfddlslKKIAYRHRAIAHKYKEQGSYWSSVQVGRKSQLLLLVWpvlilpiqnpsm
MDATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKykeqgsywsSVQVGRKSQLLLLVwpvlilpiqnpsm
MDATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKYKEQGSYWSSVQVGRKSqllllvwpvlilpiqNPSM
****LTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKYKEQGSYWSSVQVGRKSQLLLLVWPVLILPI*****
***TLTKVFIWDMDETLILLKSLLNGTFAQSFND*KDADKGVQIGRMWENHILNVCDECFFYEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKYKEQGSYWSSVQVGRKSQLLLLVWPVLILPIQN***
MDATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKYKEQGSYWSSVQVGRKSQLLLLVWPVLILPIQNPSM
***TLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKYKEQGSYWSSVQVGRKSQLLLLVWPVLILPIQ****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKYKEQGSYWSSVQVGRKSQLLLLVWPVLILPIQNPSM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query153 2.2.26 [Sep-21-2011]
Q58DB6 537 Eyes absent homolog 2 OS= yes no 0.751 0.214 0.353 2e-16
O08575 532 Eyes absent homolog 2 OS= yes no 0.751 0.216 0.353 2e-16
O00167 538 Eyes absent homolog 2 OS= yes no 0.751 0.213 0.353 3e-15
O95677 639 Eyes absent homolog 4 OS= no no 0.751 0.179 0.338 5e-15
Q9Z191 616 Eyes absent homolog 4 OS= no no 0.751 0.186 0.338 5e-15
P97767 591 Eyes absent homolog 1 OS= no no 0.751 0.194 0.315 7e-14
Q99502 592 Eyes absent homolog 1 OS= no no 0.751 0.194 0.315 7e-14
Q05201 766 Developmental protein eye yes no 0.718 0.143 0.328 4e-13
Q99504 573 Eyes absent homolog 3 OS= no no 0.568 0.151 0.359 1e-10
P97480 510 Eyes absent homolog 3 OS= no no 0.568 0.170 0.359 4e-10
>sp|Q58DB6|EYA2_BOVIN Eyes absent homolog 2 OS=Bos taurus GN=EYA2 PE=2 SV=1 Back     alignment and function desciption
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 15/130 (11%)

Query: 2   DATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFF 61
           D  + +VF+WD+DET+I+  SLL GTFA  +   KD    V+IG M E  I N+ D   F
Sbjct: 263 DNEIERVFVWDLDETIIIFHSLLTGTFASRYG--KDTTASVRIGLMMEEMIFNLADTHLF 320

Query: 62  YEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGL--CPPFDDLSL-----------KKIA 108
           +  +E+ +   +D +   D+G+DLS Y F  DG     P  +L L           +K+A
Sbjct: 321 FNDLEDCDQIHVDDVSSDDNGQDLSTYNFSADGFHSSAPGANLCLGSGVHGGVDWMRKLA 380

Query: 109 YRHRAIAHKY 118
           +R+R +   Y
Sbjct: 381 FRYRRVKEMY 390




Tyrosine phosphatase that specifically dephosphorylates 'Tyr-142' of histone H2AX (H2AXY142ph). 'Tyr-142' phosphorylation of histone H2AX plays a central role in DNA repair and acts as a mark that distinguishes between apoptotic and repair responses to genotoxic stress. Promotes efficient DNA repair by dephosphorylating H2AX, promoting the recruitment of DNA repair complexes containing MDC1. Its function as histone phosphatase probably explains its role in transcription regulation during organogenesis. Coactivates SIX1. Seems to coactivate SIX2, SIX4 and SIX5. Together with SIX1 and DACH2 seem to be involved in myogenesis. May be involved in development of the eye. Interaction with GNAZ and GNAI2 prevents nuclear translocation and transcriptional activity.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8
>sp|O08575|EYA2_MOUSE Eyes absent homolog 2 OS=Mus musculus GN=Eya2 PE=1 SV=1 Back     alignment and function description
>sp|O00167|EYA2_HUMAN Eyes absent homolog 2 OS=Homo sapiens GN=EYA2 PE=1 SV=2 Back     alignment and function description
>sp|O95677|EYA4_HUMAN Eyes absent homolog 4 OS=Homo sapiens GN=EYA4 PE=1 SV=2 Back     alignment and function description
>sp|Q9Z191|EYA4_MOUSE Eyes absent homolog 4 OS=Mus musculus GN=Eya4 PE=2 SV=2 Back     alignment and function description
>sp|P97767|EYA1_MOUSE Eyes absent homolog 1 OS=Mus musculus GN=Eya1 PE=1 SV=3 Back     alignment and function description
>sp|Q99502|EYA1_HUMAN Eyes absent homolog 1 OS=Homo sapiens GN=EYA1 PE=1 SV=2 Back     alignment and function description
>sp|Q05201|EYA_DROME Developmental protein eyes absent OS=Drosophila melanogaster GN=eya PE=1 SV=1 Back     alignment and function description
>sp|Q99504|EYA3_HUMAN Eyes absent homolog 3 OS=Homo sapiens GN=EYA3 PE=1 SV=3 Back     alignment and function description
>sp|P97480|EYA3_MOUSE Eyes absent homolog 3 OS=Mus musculus GN=Eya3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query153
147825396187 hypothetical protein VITISV_032363 [Viti 0.758 0.620 0.706 5e-44
225427254 323 PREDICTED: eyes absent homolog 2 [Vitis 0.758 0.359 0.706 2e-43
297827011 308 predicted protein [Arabidopsis lyrata su 0.777 0.386 0.638 3e-40
224138084 292 predicted protein [Populus trichocarpa] 0.705 0.369 0.703 8e-40
297742121 289 unnamed protein product [Vitis vinifera] 0.705 0.373 0.712 2e-39
18403799 307 eyes absent-like protein [Arabidopsis th 0.738 0.368 0.646 2e-39
297788841 308 predicted protein [Arabidopsis lyrata su 0.777 0.386 0.630 3e-39
21593200 307 similar to eyes absent protein [Arabidop 0.738 0.368 0.637 4e-39
356512012 318 PREDICTED: eyes absent homolog 4-like [G 0.725 0.349 0.666 4e-38
449521152133 PREDICTED: eyes absent homolog 2-like, p 0.738 0.849 0.628 2e-37
>gi|147825396|emb|CAN62268.1| hypothetical protein VITISV_032363 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  182 bits (461), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 82/116 (70%), Positives = 99/116 (85%)

Query: 5   LTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQ 64
           +T V+IWDMDETLILLKSLLNGT+A++FN LKD  KGV+IG+MWE +IL V D+ FFYEQ
Sbjct: 27  ITNVYIWDMDETLILLKSLLNGTYAETFNGLKDVQKGVEIGKMWEKYILQVADDIFFYEQ 86

Query: 65  IENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKYKE 120
           IEN N PFLDAL QYDDG+DLSDY+F+ DG   P+DDL+ +K+AYRHR IAHKYK+
Sbjct: 87  IENYNKPFLDALSQYDDGKDLSDYDFNHDGCSSPYDDLNKRKLAYRHRVIAHKYKQ 142




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427254|ref|XP_002278688.1| PREDICTED: eyes absent homolog 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297827011|ref|XP_002881388.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297327227|gb|EFH57647.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224138084|ref|XP_002326514.1| predicted protein [Populus trichocarpa] gi|222833836|gb|EEE72313.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297742121|emb|CBI33908.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|18403799|ref|NP_565803.1| eyes absent-like protein [Arabidopsis thaliana] gi|15294282|gb|AAK95318.1|AF410332_1 At2g35320/T4C15.1 [Arabidopsis thaliana] gi|15450950|gb|AAK96746.1| EYA-like protein [Arabidopsis thaliana] gi|17978677|gb|AAL47332.1| EYA-like protein [Arabidopsis thaliana] gi|20197216|gb|AAC61806.2| similar to eyes absent protein [Arabidopsis thaliana] gi|23506145|gb|AAN31084.1| At2g35320/T4C15.1 [Arabidopsis thaliana] gi|330253999|gb|AEC09093.1| eyes absent-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297788841|ref|XP_002862457.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297307986|gb|EFH38715.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21593200|gb|AAM65149.1| similar to eyes absent protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356512012|ref|XP_003524715.1| PREDICTED: eyes absent homolog 4-like [Glycine max] Back     alignment and taxonomy information
>gi|449521152|ref|XP_004167594.1| PREDICTED: eyes absent homolog 2-like, partial [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query153
TAIR|locus:2063414 307 EYA "EYES ABSENT homolog" [Ara 0.745 0.371 0.652 5.3e-40
RGD|620096198 Eya2 "eyes absent homolog 2 (D 0.594 0.459 0.408 5.4e-15
ZFIN|ZDB-GENE-040912-24 475 eya2 "eyes absent homolog 2 (D 0.627 0.202 0.387 7.9e-15
UNIPROTKB|F1NPL5 534 EYA2 "Uncharacterized protein" 0.594 0.170 0.408 1.3e-14
UNIPROTKB|Q58DB6 537 EYA2 "Eyes absent homolog 2" [ 0.751 0.214 0.353 1.7e-14
UNIPROTKB|O00167 538 EYA2 "Eyes absent homolog 2" [ 0.751 0.213 0.353 1.7e-14
UNIPROTKB|E2R0A2 553 EYA2 "Uncharacterized protein" 0.751 0.207 0.353 1.8e-14
UNIPROTKB|E9PTJ3 531 Eya2 "Protein Eya2" [Rattus no 0.751 0.216 0.353 2.1e-14
MGI|MGI:109341 532 Eya2 "eyes absent 2 homolog (D 0.751 0.216 0.353 2.1e-14
UNIPROTKB|F1SBF5368 EYA2 "Uncharacterized protein" 0.751 0.312 0.346 2.3e-14
TAIR|locus:2063414 EYA "EYES ABSENT homolog" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 75/115 (65%), Positives = 95/115 (82%)

Query:     8 VFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQIEN 67
             V++WDMDETLILL+SLLNGT+A+SFN  KD  +GV+IGRMWE HIL +CD+ FFYEQ+E 
Sbjct:    21 VYVWDMDETLILLRSLLNGTYAESFNGSKDVKRGVEIGRMWEKHILKICDDFFFYEQVEE 80

Query:    68 NNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKYKEQG 122
              N PFLD+L+QYDDG+DLS YEF +D    P DDL+ +K+AYRHRA+A +Y E+G
Sbjct:    81 CNEPFLDSLRQYDDGKDLSRYEFKQDDFSTPTDDLNKRKLAYRHRAVAERY-EKG 134




GO:0005634 "nucleus" evidence=ISM
GO:0007275 "multicellular organismal development" evidence=IEA
GO:0006470 "protein dephosphorylation" evidence=TAS
GO:0030946 "protein tyrosine phosphatase activity, metal-dependent" evidence=IDA
RGD|620096 Eya2 "eyes absent homolog 2 (Drosophila)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040912-24 eya2 "eyes absent homolog 2 (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NPL5 EYA2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q58DB6 EYA2 "Eyes absent homolog 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O00167 EYA2 "Eyes absent homolog 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2R0A2 EYA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E9PTJ3 Eya2 "Protein Eya2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:109341 Eya2 "eyes absent 2 homolog (Drosophila)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1SBF5 EYA2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query153
TIGR01658 274 TIGR01658, EYA-cons_domain, eyes absent protein co 7e-55
>gnl|CDD|233514 TIGR01658, EYA-cons_domain, eyes absent protein conserved domain Back     alignment and domain information
 Score =  173 bits (440), Expect = 7e-55
 Identities = 69/114 (60%), Positives = 85/114 (74%)

Query: 5   LTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQ 64
              V++WDMDETLILL SLLNG++A+SFN  KD  +GV+IGR WE  IL +CD  FFYE+
Sbjct: 1   PENVYVWDMDETLILLHSLLNGSYAESFNGSKDHKRGVEIGRRWEEMILEICDTHFFYEE 60

Query: 65  IENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKY 118
           IE  N PFLD ++ YDDG+DLS YEF  DG   P DDL+ +K+AYRHRA+A  Y
Sbjct: 61  IEECNEPFLDDVRSYDDGKDLSRYEFKTDGFSTPTDDLNKRKLAYRHRAVAEIY 114


This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. Length = 274

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 153
TIGR01658 274 EYA-cons_domain eyes absent protein conserved doma 100.0
KOG3107 468 consensus Predicted haloacid dehalogenase-like hyd 100.0
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain Back     alignment and domain information
Probab=100.00  E-value=1.3e-64  Score=428.70  Aligned_cols=117  Identities=59%  Similarity=1.094  Sum_probs=116.1

Q ss_pred             ceEEEEeeCCcceehhhhhcchhhhhhhCCCCChhhHHHHHHHHHHHHHhhhhhhhhhhhcccCCccccccccccCCCCC
Q 031776            5 LTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQIENNNTPFLDALKQYDDGRD   84 (153)
Q Consensus         5 lerVFIWDLDETiIif~SLLtGsyA~~~~~~KD~~~~v~LG~rmEemIfnlaD~hfFfndlEecdqvhiddvssdDnGqD   84 (153)
                      ++||||||||||||||||||||+||++|+|+|||+++++||+|||||||++||+||||||+|||||||||||++||||||
T Consensus         1 ~e~VfvWDlDETlIif~SLL~GsyA~~f~g~KD~~~~v~lG~r~E~lIl~l~D~~fFf~~lEe~dq~~lddv~~~DdG~D   80 (274)
T TIGR01658         1 PENVYVWDMDETLILLHSLLNGSYAESFNGSKDHKRGVEIGRRWEEMILEICDTHFFYEEIEECNEPFLDDVRSYDDGKD   80 (274)
T ss_pred             CceeEEEeccchHHHHHHhhcchHHHHcCCCcCcHHHHHHHHHHHHHHHHHHHhhhhhhhHHhcCccchhhhhhcccccC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhc
Q 031776           85 LSDYEFDRDGLCPPFDDLSLKKIAYRHRAIAHKYKEQ  121 (153)
Q Consensus        85 LS~Y~F~~dgf~~p~~~~nmRKLAfRyR~Ike~Y~~y  121 (153)
                      ||+|+|.+|||++|.++.++||||||||+|||+|++|
T Consensus        81 Ls~Y~F~~D~f~~p~~~~~~rKLAyR~R~I~e~Y~~~  117 (274)
T TIGR01658        81 LSRYEFKTDGFSTPTDDLNKRKLAYRHRAVAEIYEKG  117 (274)
T ss_pred             ccccccccccCCCCccchhhhHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999



This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query153
4egc_B 294 Crystal Structure Of Mbp-fused Human Six1 Bound To 4e-16
3hb0_A 274 Structure Of Edeya2 Complexed With Bef3 Length = 27 5e-16
3geb_A 274 Crystal Structure Of Edeya2 Length = 274 6e-16
>pdb|4EGC|B Chain B, Crystal Structure Of Mbp-fused Human Six1 Bound To Human Eya2 Eya Domain Length = 294 Back     alignment and structure

Iteration: 1

Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 15/130 (11%) Query: 2 DATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFF 61 D + +VF+WD+DET+I+ SLL GTFA + KD V+IG M E I N+ D F Sbjct: 20 DNEIERVFVWDLDETIIIFHSLLTGTFASRYG--KDTTTSVRIGLMMEEMIFNLADTHLF 77 Query: 62 YEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGL--CPPFDDLSL-----------KKIA 108 + +E+ + +D + D+G+DLS Y F DG P +L L +K+A Sbjct: 78 FNDLEDCDQIHVDDVSSDDNGQDLSTYNFSADGFHSSAPGANLCLGSGVHGGVDWMRKLA 137 Query: 109 YRHRAIAHKY 118 +R+R + Y Sbjct: 138 FRYRRVKEMY 147
>pdb|3HB0|A Chain A, Structure Of Edeya2 Complexed With Bef3 Length = 274 Back     alignment and structure
>pdb|3GEB|A Chain A, Crystal Structure Of Edeya2 Length = 274 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query153
3geb_A 274 EYES absent homolog 2; hydrolase, activator, alter 9e-37
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A Length = 274 Back     alignment and structure
 Score =  126 bits (317), Expect = 9e-37
 Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 15/127 (11%)

Query: 5   LTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQ 64
           + +VF+WD+DET+I+  SLL GTFA  +   KD    V+IG M E  I N+ D   F+  
Sbjct: 3   MERVFVWDLDETIIIFHSLLTGTFASRYG--KDTTTSVRIGLMMEEMIFNLADTHLFFND 60

Query: 65  IENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSL-------------KKIAYRH 111
           +E+ +   +D +   D+G+DLS Y F  DG        +L             +K+A+R+
Sbjct: 61  LEDCDQIHVDDVSSDDNGQDLSTYNFSADGFHSSAPGANLCLGSGVHGGVDWMRKLAFRY 120

Query: 112 RAIAHKY 118
           R +   Y
Sbjct: 121 RRVKEMY 127


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query153
3geb_A 274 EYES absent homolog 2; hydrolase, activator, alter 100.0
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A Back     alignment and structure
Probab=100.00  E-value=6.2e-69  Score=454.47  Aligned_cols=125  Identities=34%  Similarity=0.647  Sum_probs=117.4

Q ss_pred             CCceEEEEeeCCcceehhhhhcchhhhhhhCCCCChhhHHHHHHHHHHHHHhhhhhhhhhhhcccCCccccccccccCCC
Q 031776            3 ATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQIENNNTPFLDALKQYDDG   82 (153)
Q Consensus         3 s~lerVFIWDLDETiIif~SLLtGsyA~~~~~~KD~~~~v~LG~rmEemIfnlaD~hfFfndlEecdqvhiddvssdDnG   82 (153)
                      |+||||||||||||||||||||||+||++|+  |||+++++||+||||||||+||+||||||+|||||||||||++||||
T Consensus         1 ~~~erVfiWDlDETiIif~SLltg~yA~~~~--KD~~~~v~lG~rmEelIf~laD~hfFf~dlE~cdq~hiddv~~dDnG   78 (274)
T 3geb_A            1 SHMERVFVWDLDETIIIFHSLLTGTFASRYG--KDTTTSVRIGLMMEEMIFNLADTHLFFNDLEDCDQIHVDDVSSDDNG   78 (274)
T ss_dssp             CCCCEEEEECCBTTTBCCHHHHSSHHHHHHT--CCHHHHHHHHHHHHHHHHHHHHHHSCHHHHTSCCCSSTTTTGGGCCC
T ss_pred             CccceeEeeccccHHHHHHHHhcchHHHHhC--CCCchHhHHhHHHHHHHHHHhhhhccccchhhcCccchhhhhccCCc
Confidence            6899999999999999999999999999997  99999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcCCCCCCCCCCC-------------cchHHHHHHHHHHHHHHHhhcCCccceee
Q 031776           83 RDLSDYEFDRDGLCPPFD-------------DLSLKKIAYRHRAIAHKYKEQGSYWSSVQ  129 (153)
Q Consensus        83 qDLS~Y~F~~dgf~~p~~-------------~~nmRKLAfRyR~Ike~Y~~y~~n~~~~~  129 (153)
                      ||||+|+|++|||++|.+             ++||||||||||+|||+|++|++|+.|+-
T Consensus        79 qDLs~y~f~~dgf~~~~~~~~lc~~~gvrggvDWmRKLAfryr~IkeiY~~y~~nv~~LL  138 (274)
T 3geb_A           79 QDLSTYNFSADGFHSSAPGANLCLGSGVHGGVDWMRKLAFRYRRVKEMYNTYKNNVGGLI  138 (274)
T ss_dssp             CCCSSCCSSSSCC----------------CCSSHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred             ccccccccccccCCCCCccccccccccccchhHHHHHHHHHHHHHHHHHhhhhccccccc
Confidence            999999999999998874             57899999999999999999999999985




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00