Citrus Sinensis ID: 031959

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV
cccccccccccccccccccHHHHHHHHHHHcccccEEEEcccccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccEEEEEEEEEccEEEEEEEccccccccccc
EEEEHHHccccccccccHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccEEEEEEEEccccEEEEEEEcccccccccc
mvrnianmvppydqkkysgagAAIEYAVLHLKVENIVVIGHSccggikglmsipdngttasDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNvslgnlltypfVRESVVKNTLAlkgahydfvngkfelwdldfnilpsvsv
mvrnianmvppydqkkysGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFnilpsvsv
MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV
***************KYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNIL*****
MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVS*
MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSA************FEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV
MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNIL*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query150 2.2.26 [Sep-21-2011]
P46513190 Carbonic anhydrase 2 (Fra N/A no 0.986 0.778 0.777 6e-64
P16016319 Carbonic anhydrase, chlor N/A no 1.0 0.470 0.726 5e-61
P42737259 Carbonic anhydrase 2, chl no no 1.0 0.579 0.726 3e-60
P27141321 Carbonic anhydrase, chlor N/A no 1.0 0.467 0.726 5e-60
P27140347 Carbonic anhydrase, chlor no no 1.0 0.432 0.713 3e-59
P17067328 Carbonic anhydrase, chlor N/A no 1.0 0.457 0.693 3e-58
P46512330 Carbonic anhydrase 1 OS=F N/A no 1.0 0.454 0.686 3e-58
P46511330 Carbonic anhydrase OS=Fla N/A no 1.0 0.454 0.686 1e-57
P46281329 Carbonic anhydrase OS=Fla N/A no 1.0 0.455 0.686 1e-57
P46510330 Carbonic anhydrase OS=Fla N/A no 1.0 0.454 0.68 4e-57
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1 Back     alignment and function desciption
 Score =  242 bits (618), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 115/148 (77%), Positives = 129/148 (87%)

Query: 1   MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTA 60
           +VRNIANMVPPYD  K+SGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPD+GT A
Sbjct: 41  VVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPA 100

Query: 61  SDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNT 120
           SDFIE+WVK+   AKSKVK  CN+L F + C  CEKEAVNVSLGNLLTYPFVR+++V   
Sbjct: 101 SDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKK 160

Query: 121 LALKGAHYDFVNGKFELWDLDFNILPSV 148
           L+LKGAHYDFVNG F+LW+LDF I PS+
Sbjct: 161 LSLKGAHYDFVNGAFDLWNLDFGISPSL 188
Reversible hydration of carbon dioxide.
Flaveria linearis (taxid: 4225)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2 Back     alignment and function description
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2 Back     alignment and function description
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2 Back     alignment and function description
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1 Back     alignment and function description
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1 Back     alignment and function description
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1 Back     alignment and function description
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query150
255568812 280 carbonic anhydrase, putative [Ricinus co 1.0 0.535 0.866 6e-72
356501896 278 PREDICTED: carbonic anhydrase, chloropla 1.0 0.539 0.84 3e-70
356497769 256 PREDICTED: carbonic anhydrase, chloropla 1.0 0.585 0.84 3e-70
356497767 278 PREDICTED: carbonic anhydrase, chloropla 1.0 0.539 0.84 4e-70
357485883 290 Carbonic anhydrase [Medicago truncatula] 1.0 0.517 0.833 4e-70
357485881 278 Carbonic anhydrase [Medicago truncatula] 1.0 0.539 0.833 4e-70
217074216 278 unknown [Medicago truncatula] 1.0 0.539 0.82 6e-69
224107829 256 predicted protein [Populus trichocarpa] 1.0 0.585 0.813 6e-69
359473184 256 PREDICTED: carbonic anhydrase, chloropla 0.986 0.578 0.837 7e-69
118486197 256 unknown [Populus trichocarpa] 1.0 0.585 0.813 7e-69
>gi|255568812|ref|XP_002525377.1| carbonic anhydrase, putative [Ricinus communis] gi|223535340|gb|EEF37015.1| carbonic anhydrase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  275 bits (702), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 130/150 (86%), Positives = 136/150 (90%)

Query: 1   MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTA 60
           +VRNIA+MVPPYDQ KYSG GAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPD+GTTA
Sbjct: 131 VVRNIASMVPPYDQTKYSGMGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTA 190

Query: 61  SDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNT 120
           SDFIE WVKICSSAKS+VK ECN LSFEEQC NCEKEAVNVSLGNLLTYPFV E V K T
Sbjct: 191 SDFIENWVKICSSAKSRVKTECNSLSFEEQCHNCEKEAVNVSLGNLLTYPFVVEGVTKKT 250

Query: 121 LALKGAHYDFVNGKFELWDLDFNILPSVSV 150
           LALKGAHYDFV G FELWDLDF I P+V+V
Sbjct: 251 LALKGAHYDFVKGAFELWDLDFKITPTVAV 280

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356501896|ref|XP_003519759.1| PREDICTED: carbonic anhydrase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356497769|ref|XP_003517731.1| PREDICTED: carbonic anhydrase, chloroplastic-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|356497767|ref|XP_003517730.1| PREDICTED: carbonic anhydrase, chloroplastic-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|357485883|ref|XP_003613229.1| Carbonic anhydrase [Medicago truncatula] gi|355514564|gb|AES96187.1| Carbonic anhydrase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357485881|ref|XP_003613228.1| Carbonic anhydrase [Medicago truncatula] gi|355514563|gb|AES96186.1| Carbonic anhydrase [Medicago truncatula] Back     alignment and taxonomy information
>gi|217074216|gb|ACJ85468.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|224107829|ref|XP_002314617.1| predicted protein [Populus trichocarpa] gi|118485783|gb|ABK94740.1| unknown [Populus trichocarpa] gi|222863657|gb|EEF00788.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359473184|ref|XP_003631258.1| PREDICTED: carbonic anhydrase, chloroplastic-like isoform 2 [Vitis vinifera] gi|297739035|emb|CBI28524.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|118486197|gb|ABK94941.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query150
TAIR|locus:2016109280 BCA4 "beta carbonic anhydrase 0.98 0.525 0.709 4.2e-56
TAIR|locus:2185460331 CA2 "carbonic anhydrase 2" [Ar 1.0 0.453 0.726 6.8e-56
TAIR|locus:2034797258 BCA3 "beta carbonic anhydrase 1.0 0.581 0.668 3.7e-55
TAIR|locus:2084198347 CA1 "carbonic anhydrase 1" [Ar 1.0 0.432 0.713 9.9e-55
TAIR|locus:2134218302 BCA5 "beta carbonic anhydrase 0.926 0.460 0.468 2.3e-30
TAIR|locus:2196292290 BCA6 "beta carbonic anhydrase 0.92 0.475 0.402 4.6e-25
TIGR_CMR|GSU_2307211 GSU_2307 "carbonic anhydrase" 0.98 0.696 0.369 2.4e-21
TIGR_CMR|SPO_3715216 SPO_3715 "carbonic anhydrase, 0.893 0.620 0.352 1.4e-18
TIGR_CMR|CBU_0139206 CBU_0139 "carbonic anhydrase" 0.813 0.592 0.325 8.6e-17
UNIPROTKB|Q54735274 icfA "Carbonic anhydrase" [Syn 0.913 0.5 0.302 1.1e-14
TAIR|locus:2016109 BCA4 "beta carbonic anhydrase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 105/148 (70%), Positives = 128/148 (86%)

Query:     1 MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGT-T 59
             +VRNIANMVPP+DQK++SG GAA+EYAV+HLKVENI+VIGHSCCGGIKGLMSI D+   T
Sbjct:   129 VVRNIANMVPPFDQKRHSGVGAAVEYAVVHLKVENILVIGHSCCGGIKGLMSIEDDAAPT 188

Query:    60 ASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKN 119
              SDFIE WVKI +SA++K+K+E  DLS+++QC  CEKEAVNVSLGNLL+YPFVR  VVKN
Sbjct:   189 QSDFIENWVKIGASARNKIKEEHKDLSYDDQCNKCEKEAVNVSLGNLLSYPFVRAEVVKN 248

Query:   120 TLALKGAHYDFVNGKFELWDLDFNILPS 147
             TLA++G HY+FV G F+LW+LDF   P+
Sbjct:   249 TLAIRGGHYNFVKGTFDLWELDFKTTPA 276
GO:0004089 "carbonate dehydratase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0008270 "zinc ion binding" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0015976 "carbon utilization" evidence=IEA;ISS
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0010037 "response to carbon dioxide" evidence=IGI
GO:0010119 "regulation of stomatal movement" evidence=IGI
GO:0010167 "response to nitrate" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA
TAIR|locus:2185460 CA2 "carbonic anhydrase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034797 BCA3 "beta carbonic anhydrase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084198 CA1 "carbonic anhydrase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134218 BCA5 "beta carbonic anhydrase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196292 BCA6 "beta carbonic anhydrase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2307 GSU_2307 "carbonic anhydrase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_3715 SPO_3715 "carbonic anhydrase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0139 CBU_0139 "carbonic anhydrase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|Q54735 icfA "Carbonic anhydrase" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P46513CAH2_FLALI4, ., 2, ., 1, ., 10.77700.98660.7789N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.10.921
4th Layer4.2.1.10.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query150
PLN00416258 PLN00416, PLN00416, carbonate dehydratase 7e-85
PLN03014347 PLN03014, PLN03014, carbonic anhydrase 2e-74
cd00884190 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) 1e-66
PLN03019330 PLN03019, PLN03019, carbonic anhydrase 3e-66
PLN03006301 PLN03006, PLN03006, carbonate dehydratase 5e-40
pfam00484149 pfam00484, Pro_CA, Carbonic anhydrase 6e-37
smart00947154 smart00947, Pro_CA, Carbonic anhydrase 3e-36
PLN02154290 PLN02154, PLN02154, carbonic anhydrase 6e-33
cd00382119 cd00382, beta_CA, Carbonic anhydrases (CA) are zin 7e-25
COG0288207 COG0288, CynT, Carbonic anhydrase [Inorganic ion t 4e-23
cd00883182 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) 9e-14
cd03378154 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) 1e-05
PRK10437220 PRK10437, PRK10437, carbonic anhydrase; Provisiona 2e-05
>gnl|CDD|177809 PLN00416, PLN00416, carbonate dehydratase Back     alignment and domain information 
 Score =  249 bits (636), Expect = 7e-85
 Identities = 105/148 (70%), Positives = 128/148 (86%), Gaps = 1/148 (0%)

Query: 1   MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGT-T 59
           +VRNIANMVPP+DQK++SG GAA+EYAV+HLKVENI+VIGHSCCGGIKGLMSI D+   T
Sbjct: 107 VVRNIANMVPPFDQKRHSGVGAAVEYAVVHLKVENILVIGHSCCGGIKGLMSIEDDAAPT 166

Query: 60  ASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKN 119
            SDFIE WVKI +SA++K+K+E  DLS+++QC  CEKEAVNVSLGNLL+YPFVR  VVKN
Sbjct: 167 QSDFIENWVKIGASARNKIKEEHKDLSYDDQCNKCEKEAVNVSLGNLLSYPFVRAEVVKN 226

Query: 120 TLALKGAHYDFVNGKFELWDLDFNILPS 147
           TLA++G HY+FV G F+LW+LDF   P+
Sbjct: 227 TLAIRGGHYNFVKGTFDLWELDFKTTPA 254

Length = 258
>gnl|CDD|178588 PLN03014, PLN03014, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|238449 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|166660 PLN03019, PLN03019, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|178583 PLN03006, PLN03006, carbonate dehydratase Back     alignment and domain information
>gnl|CDD|215941 pfam00484, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|214929 smart00947, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|215111 PLN02154, PLN02154, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|238224 cd00382, beta_CA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|223365 COG0288, CynT, Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|238448 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|239473 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|182460 PRK10437, PRK10437, carbonic anhydrase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 150
PLN03014347 carbonic anhydrase 100.0
PLN03019330 carbonic anhydrase 100.0
PLN00416258 carbonate dehydratase 100.0
cd00884190 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-c 100.0
PRK10437220 carbonic anhydrase; Provisional 100.0
PLN03006301 carbonate dehydratase 100.0
cd00883182 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-c 100.0
PLN02154290 carbonic anhydrase 100.0
COG0288207 CynT Carbonic anhydrase [Inorganic ion transport a 100.0
PRK15219245 carbonic anhydrase; Provisional 100.0
PF00484153 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Ca 100.0
cd00382119 beta_CA Carbonic anhydrases (CA) are zinc-containi 99.97
cd03378154 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-c 99.97
cd03379142 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-c 99.96
KOG1578276 consensus Predicted carbonic anhydrase involved in 99.93
KOG1578276 consensus Predicted carbonic anhydrase involved in 92.42
>PLN03014 carbonic anhydrase Back     alignment and domain information 
Probab=100.00  E-value=7.5e-41  Score=268.74  Aligned_cols=150  Identities=71%  Similarity=1.180  Sum_probs=130.4

Q ss_pred             CccccccccCCCCCCcccchHHHHHHHHhhcCcceEEEeecCCchhhhhhhcCCCCCCCCchhHHHHHHhhHHHHHHHHH
Q 031959            1 MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKK   80 (150)
Q Consensus         1 ViRNaGN~v~~~~~~~~~~~~asleyav~~L~v~~IvV~GHt~CGav~aa~~~~~~~~~~~~~i~~~l~~~~~a~~~~~~   80 (150)
                      |+||+||+|+++|...+++++++||||+.+|||++|||||||+||||+|+++....+....+++++|++.++|++.....
T Consensus       187 VvRNaGNiV~~~d~~~~~~v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~~~~~~g~~~~~~I~~wl~~i~pA~~~v~~  266 (347)
T PLN03014        187 VVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVIS  266 (347)
T ss_pred             EEeccccccCcccccccccchhHHHHHHHHhCCCEEEEeCCCCchHHHHHHhccccccccchhHHHHHHHHHHHHHHHHh
Confidence            68999999999875445568899999999999999999999999999999875443333467999999999999987665


Q ss_pred             hcCCCChHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHcCceEEEEEEEEcccCEEEEeeccCCCCCCCCC
Q 031959           81 ECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV  150 (150)
Q Consensus        81 ~~~~~~~~~~~~~~~~~nV~~~v~~L~~~p~i~~~v~~g~l~V~G~~Ydi~tG~v~~~~~~~~~~~~~~~  150 (150)
                      .....+..+.++.++++||++|+++|+++|+|++++++|+|.||||+||++||+|++++.+..+-|+.++
T Consensus       267 ~~~~~~~~d~~~~~ekeNV~~qV~nL~t~P~V~eav~~G~L~I~G~~YDi~TG~V~~l~~~~~~~~~~~~  336 (347)
T PLN03014        267 ELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSV  336 (347)
T ss_pred             hhccccHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCcEEEEEEEECCCceEEEeccccccCCcccc
Confidence            5555556666667788999999999999999999999999999999999999999999999999888764

>PLN03019 carbonic anhydrase Back     alignment and domain information
>PLN00416 carbonate dehydratase Back     alignment and domain information
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PRK10437 carbonic anhydrase; Provisional Back     alignment and domain information
>PLN03006 carbonate dehydratase Back     alignment and domain information
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PLN02154 carbonic anhydrase Back     alignment and domain information
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK15219 carbonic anhydrase; Provisional Back     alignment and domain information
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4 Back     alignment and domain information
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query150
1ekj_A221 The X-Ray Crystallographic Structure Of Beta Carbon 1e-58
2a5v_A213 Crystal Structure Of M. Tuberculosis Beta Carbonic 2e-05
1ym3_A215 Crystal Structure Of Carbonic Anhydrase Rv3588c Fro 2e-05
3mf3_A221 Cobalt(Ii)-Substituted Haemophilus Influenzae B-Car 4e-05
3e3g_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant G41a 4e-05
2a8c_A229 Haemophilus Influenzae Beta-Carbonic Anhydrase Leng 4e-05
3e2x_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant V47a 5e-05
3e1v_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant D44n 5e-05
3e24_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant W39f 5e-05
3qy1_A223 1.54a Resolution Crystal Structure Of A Beta-Carbon 9e-05
3e28_A229 H. Influenzae Beta-carbonic Anhydrase, Variant Y181 1e-04
2w3q_A243 Structure And Inhibition Of The Co2-Sensing Carboni 7e-04
2w3n_A239 Structure And Inhibition Of The Co2-Sensing Carboni 7e-04
1ddz_A 496 X-Ray Structure Of A Beta-Carbonic Anhydrase From T 8e-04
>pdb|1EKJ|A Chain A, The X-Ray Crystallographic Structure Of Beta Carbonic Anhydrase From The C3 Dicot Pisum Sativum Length = 221 Back     alignment and structure 
Iteration: 1

 Score =  221 bits (563), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 104/150 (69%), Positives = 120/150 (80%)
Query: 1   MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTA 60
           +VRN+AN+VPPYDQ KY+G GAAIEYAVLHLKV NIVVIGHS CGGIKGL+S P +GT +
Sbjct: 72  VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS 131
Query: 61  SDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNT 120
           +DFIEEWVKI   AK+KVK +  D  F E C +CEKEAVN SLGNLLTYPFVRE +V  T
Sbjct: 132 TDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKT 191
Query: 121 LALKGAHYDFVNGKFELWDLDFNILPSVSV 150
           LALKG +YDFV G FELW L+F +  + SV
Sbjct: 192 LALKGGYYDFVKGSFELWGLEFGLSSTFSV 221
>pdb|2A5V|A Chain A, Crystal Structure Of M. Tuberculosis Beta Carbonic Anhydrase, Rv3588c, Tetrameric Form Length = 213 Back     alignment and structure
>pdb|1YM3|A Chain A, Crystal Structure Of Carbonic Anhydrase Rv3588c From Mycobacterium Tuberculosis Length = 215 Back     alignment and structure
>pdb|3MF3|A Chain A, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic Anhydrase Length = 221 Back     alignment and structure
>pdb|3E3G|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a Length = 229 Back     alignment and structure
>pdb|2A8C|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase Length = 229 Back     alignment and structure
>pdb|3E2X|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a Length = 229 Back     alignment and structure
>pdb|3E1V|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n Length = 229 Back     alignment and structure
>pdb|3E24|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f Length = 229 Back     alignment and structure
>pdb|3QY1|A Chain A, 1.54a Resolution Crystal Structure Of A Beta-Carbonic Anhydrase From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 Length = 223 Back     alignment and structure
>pdb|3E28|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f Length = 229 Back     alignment and structure
>pdb|2W3Q|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic Anhydrase Can2 From The Pathogenic Fungus Cryptococcus Neoformans Length = 243 Back     alignment and structure
>pdb|2W3N|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic Anhydrase Can2 From The Pathogenic Fungus Cryptococcus Neoformans Length = 239 Back     alignment and structure
>pdb|1DDZ|A Chain A, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red Alga, Porphyridium Purpureum R-1 Length = 496 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query150
1ekj_A221 Beta-carbonic anhydrase; rossman fold domain, stra 6e-67
3eyx_A216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 1e-53
3qy1_A223 Carbonic anhydrase; structural genomics, center fo 6e-51
3e3i_A229 Carbonic anhydrase 2, beta carbonic anhydrase; all 7e-50
3ucj_A227 Carbonic anhydrase; alpha/beta, strand exchange, l 6e-49
2w3q_A243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 1e-45
1ddz_A496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 6e-44
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 7e-43
1ym3_A215 Carbonic anhydrase (carbonate dehydratase) (carbo 2e-40
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 3e-20
3teo_A204 Carbon disulfide hydrolase; beta carbonic anhydras 2e-15
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 4e-10
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 2e-09
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Length = 221 Back     alignment and structure
 Score =  201 bits (513), Expect = 6e-67
 Identities = 104/150 (69%), Positives = 120/150 (80%)

Query: 1   MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTA 60
           +VRN+AN+VPPYDQ KY+G GAAIEYAVLHLKV NIVVIGHS CGGIKGL+S P +GT +
Sbjct: 72  VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS 131

Query: 61  SDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNT 120
           +DFIEEWVKI   AK+KVK +  D  F E C +CEKEAVN SLGNLLTYPFVRE +V  T
Sbjct: 132 TDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKT 191

Query: 121 LALKGAHYDFVNGKFELWDLDFNILPSVSV 150
           LALKG +YDFV G FELW L+F +  + SV
Sbjct: 192 LALKGGYYDFVKGSFELWGLEFGLSSTFSV 221
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Length = 216 Back     alignment and structure
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Length = 223 Back     alignment and structure
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Length = 229 Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Length = 227 Back     alignment and structure
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Length = 243 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Length = 215 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Length = 170 Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Length = 204 Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Length = 172 Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} Length = 166 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query150
1ekj_A221 Beta-carbonic anhydrase; rossman fold domain, stra 100.0
3qy1_A223 Carbonic anhydrase; structural genomics, center fo 100.0
3eyx_A216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 100.0
3e3i_A229 Carbonic anhydrase 2, beta carbonic anhydrase; all 100.0
1ym3_A215 Carbonic anhydrase (carbonate dehydratase) (carbo 100.0
3ucj_A227 Carbonic anhydrase; alpha/beta, strand exchange, l 100.0
2w3q_A243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 100.0
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 100.0
1ddz_A496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 100.0
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 99.96
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 99.96
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 99.96
3teo_A204 Carbon disulfide hydrolase; beta carbonic anhydras 99.95
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Back     alignment and structure
Probab=100.00  E-value=2.3e-42  Score=265.60  Aligned_cols=150  Identities=69%  Similarity=1.151  Sum_probs=130.7

Q ss_pred             CccccccccCCCCCCcccchHHHHHHHHhhcCcceEEEeecCCchhhhhhhcCCCCCCCCchhHHHHHHhhHHHHHHHHH
Q 031959            1 MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKK   80 (150)
Q Consensus         1 ViRNaGN~v~~~~~~~~~~~~asleyav~~L~v~~IvV~GHt~CGav~aa~~~~~~~~~~~~~i~~~l~~~~~a~~~~~~   80 (150)
                      |+|||||+|+++|.+.++++++|||||+.+|||++|||||||+||||+|+++....+....++++.|++.+.|+......
T Consensus        72 VvRNaGN~V~~~d~~~~~~~~asleyAv~~L~v~~IvV~GHs~CGav~Aa~~~~~~~~~~~~~i~~wl~~~~~~~~~~~~  151 (221)
T 1ekj_A           72 VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKA  151 (221)
T ss_dssp             EEEEGGGCCCCSCTTTCHHHHHHHHHHHHTSCCSEEEEEEESSCHHHHHHHHCCCSSCCCSSSHHHHHGGGHHHHHHHHH
T ss_pred             EEeccCcccCcccccccchhHHHHHHHHHhcCCCEEEEEccCCCCceeeecccccccccchHHHHHHHHhhhhHHHHHHh
Confidence            68999999999886654567899999999999999999999999999999876554444467999999999998876555


Q ss_pred             hcCCCChHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHcCceEEEEEEEEcccCEEEEeeccCCCCCCCCC
Q 031959           81 ECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV  150 (150)
Q Consensus        81 ~~~~~~~~~~~~~~~~~nV~~~v~~L~~~p~i~~~v~~g~l~V~G~~Ydi~tG~v~~~~~~~~~~~~~~~  150 (150)
                      ..+..+..+..+.++++||++|+++|++||+|+++|++|++.||||+||++||+|++++++....++.++
T Consensus       152 ~~~~~~~~~~~~~~~~~nV~~~v~~L~~~p~v~~~~~~g~l~v~G~~ydi~tG~v~~~~~~~~~~~~~~~  221 (221)
T 1ekj_A          152 QHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV  221 (221)
T ss_dssp             HSTTSCHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHTTSCEEEEEEEETTTTEEEEEEECCCCCCCCCC
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCcEEEEEEEECCCCeEEEEecCCCCCccccC
Confidence            5555555555667788999999999999999999999999999999999999999999999999998764
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} SCOP: c.53.2.1 PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Back     alignment and structure
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Back     alignment and structure
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} SCOP: c.53.2.1 PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Back     alignment and structure
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Back     alignment and structure
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} SCOP: c.53.2.0 Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 150
d1ekja_210 c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum 2e-39
d1i6pa_214 c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia 2e-26
d1ddza2239 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red 1e-24
d1ddza1242 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red a 2e-21
d1g5ca_169 c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Me 8e-19
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Length = 210 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Pea (Pisum sativum) [TaxId: 3888]

 Score =  130 bits (327), Expect = 2e-39
 Identities = 104/150 (69%), Positives = 120/150 (80%)

Query: 1   MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTA 60
           +VRN+AN+VPPYDQ KY+G GAAIEYAVLHLKV NIVVIGHS CGGIKGL+S P +GT +
Sbjct: 61  VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS 120

Query: 61  SDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNT 120
           +DFIEEWVKI   AK+KVK +  D  F E C +CEKEAVN SLGNLLTYPFVRE +V  T
Sbjct: 121 TDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKT 180

Query: 121 LALKGAHYDFVNGKFELWDLDFNILPSVSV 150
           LALKG +YDFV G FELW L+F +  + SV
Sbjct: 181 LALKGGYYDFVKGSFELWGLEFGLSSTFSV 210
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Length = 214 Back     information, alignment and structure
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 239 Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 242 Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 169 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query150
d1ekja_210 beta-carbonic anhydrase {Pea (Pisum sativum) [TaxI 100.0
d1i6pa_214 beta-carbonic anhydrase {Escherichia coli [TaxId: 100.0
d1ddza2239 beta-carbonic anhydrase {Red alga (Porphyridium pu 100.0
d1ddza1242 beta-carbonic anhydrase {Red alga (Porphyridium pu 100.0
d1g5ca_169 beta-carbonic anhydrase {Archaeon Methanobacterium 99.97
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Pea (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=2e-42  Score=262.10  Aligned_cols=150  Identities=69%  Similarity=1.151  Sum_probs=135.4

Q ss_pred             CccccccccCCCCCCcccchHHHHHHHHhhcCcceEEEeecCCchhhhhhhcCCCCCCCCchhHHHHHHhhHHHHHHHHH
Q 031959            1 MVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKK   80 (150)
Q Consensus         1 ViRNaGN~v~~~~~~~~~~~~asleyav~~L~v~~IvV~GHt~CGav~aa~~~~~~~~~~~~~i~~~l~~~~~a~~~~~~   80 (150)
                      |+|||||+|+++|.+.+.++++|||||+.+||+++|||||||+||||+|+++....+....+.+..|++.+.|+......
T Consensus        61 vvRnaGn~v~~~~~~~~~~~~~sleyav~~l~v~~IVVlGHt~CGav~Aa~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~  140 (210)
T d1ekja_          61 VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKA  140 (210)
T ss_dssp             EEEEGGGCCCCSCTTTCHHHHHHHHHHHHTSCCSEEEEEEESSCHHHHHHHHCCCSSCCCSSSHHHHHGGGHHHHHHHHH
T ss_pred             EEeccCCccCccccccchhhHHHHHhhhhcCCceEEEEEcCcchHHHHHhhhhhhccCccCchHHHHHHHHHHHHHHHhh
Confidence            68999999999876555678999999999999999999999999999999987766666678899999999999987766


Q ss_pred             hcCCCChHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHcCceEEEEEEEEcccCEEEEeeccCCCCCCCCC
Q 031959           81 ECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV  150 (150)
Q Consensus        81 ~~~~~~~~~~~~~~~~~nV~~~v~~L~~~p~i~~~v~~g~l~V~G~~Ydi~tG~v~~~~~~~~~~~~~~~  150 (150)
                      .....+..++.+.+++.||++|+++|++||+|++++++|+|.||||+||++||+|++++.+...+++-|+
T Consensus       141 ~~~~~~~~~~~~~~~~~nV~~~v~~L~~~p~I~~~v~~g~l~I~G~vYDi~tG~v~~~~~~~g~~~~~~~  210 (210)
T d1ekja_         141 QHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV  210 (210)
T ss_dssp             HSTTSCHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHTTSCEEEEEEEETTTTEEEEEEECCCCCCCCCC
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHcCCeEEEEEEEECCCcEEEEEeccCCCCCCCCC
Confidence            6666666677788899999999999999999999999999999999999999999999999999998875
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure