Citrus Sinensis ID: 031966

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Protein Sequence
MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSRRVFGLDLNLTPLENDLEVLFGKMAPKVDLLMT
Secondary Structure (PSIPRED)
cccccccccccccccccccccEEccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccEEEEcccccccccHHHcccccccccccccccccccccccccccccccEEccccccEcccccccccccHHccccccccccccccccccccccccccccccEEEccccccccccccHcccccccccEEEEEc
Coil and Loop (DISEMBL)
mlltrsnraklpikkrlasdvfecktcnrqfpsfqalgghrashkkprlingetktlssttatkpklhecsicgqeFAMGQALGGHMRRHRIAMNESLNSavivsqsppvlrrsnssrrvfgldlnltplenDLEVlfgkmapkvdllmt
Flexible Loop (DISEMBL)
mlltrsnraklpikkrlasdvfECKTCNRQFPsfqalgghrashkkprlingetktlssttatkpklhECSICGQEFAMGQALGGHMRRHRIAMNESLNSAvivsqsppvlrrsnssrrvFGLDlnltplendlevlfgkmapkvdllmt
Low Complexity Region (SEG)
MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSRRVFGLDLNLTPLENDLEVLFGKMAPKVDLLMT
Disordered region (IsUnstruct)
****************LASDVFECKTCNRQFPSFQA******************************LHECSICGQEFAMGQALGGHMRRHRIAM*******VI***************RVFGLDLNLTPLENDLEVLFGKMA********
Disordered Region (DISOPRED)
MLL********************CKTCNRQFPSF************************************SICGQEFAMGQALGGHMRRHRI******************************LDLNLTPLENDLEVLFGKMAPKVDLLMT
Disordered Region (DISEMBL)
MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQA**********PRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSRRVFGLDLNLTPLENDLEVLFGKMAPKVDLLMT
Disordered Region (DISPRO)
******************SDVFECKTCNRQFPSFQAL*****************************LHECSICGQEFAMGQAL**********************************RRVFGLDLNLTPLENDLEVLFGKMAPKVDLLMT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSRRVFGLDLNLTPLENDLEVLFGKMAPKVDLLMT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	150	2.2.26 [Sep-21-2011]
Q9SLD4	178	Zinc finger protein ZAT11	yes	no	0.86	0.724	0.563	4e-35
Q42410	162	Zinc finger protein ZAT12	no	no	0.76	0.703	0.476	4e-22
Q681X4	286	Zinc finger protein ZAT5	no	no	0.76	0.398	0.421	6e-22
Q42453	168	Zinc finger protein ZAT7	no	no	0.713	0.636	0.475	1e-21
Q9LX85	164	Zinc finger protein ZAT8	no	no	0.78	0.713	0.459	1e-20
Q9M202	288	Zinc finger protein ZAT9	no	no	0.733	0.381	0.393	1e-17
Q39092	267	Zinc finger protein ZAT1	no	no	0.586	0.329	0.459	2e-14
Q9SHD0	314	Zinc finger protein ZAT4	no	no	0.786	0.375	0.357	2e-14
Q9SSW0	193	Zinc finger protein AZF3	no	no	0.693	0.538	0.408	9e-14
Q96289	227	Zinc finger protein ZAT10	no	no	0.846	0.559	0.371	2e-13

>sp|Q9SLD4|ZAT11_ARATH Zinc finger protein ZAT11 OS=Arabidopsis thaliana GN=ZAT11 PE=2 SV=1

 Score =  146 bits (369), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/133 (56%), Positives = 91/133 (68%), Gaps = 4/133 (3%)

Query: 18  ASDVFECKTCNRQFPSFQALGGHRASHKKPRLI--NGETKTLSSTTATKPKLHECSICGQ 75
            S+ FECKTCN++F SFQALGGHRASHKKP+L     + K LS+        H+CSIC Q
Sbjct: 43  TSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGN-HFHKCSICSQ 101

Query: 76  EFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSRRVFGLDLNLTPLENDLE 135
            F  GQALGGHMRRHR +M    +    +  S PVL+R  SS+R+  LDLNLTPLENDLE
Sbjct: 102 SFGTGQALGGHMRRHRSSMTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLE 161

Query: 136 VLFGK-MAPKVDL 147
            +FGK   PK+D+
Sbjct: 162 YIFGKTFVPKIDM 174

Probable transcription factor that may be involved in stress responses.
Arabidopsis thaliana (taxid: 3702)

>sp|Q42410|ZAT12_ARATH Zinc finger protein ZAT12 OS=Arabidopsis thaliana GN=ZAT12 PE=2 SV=1

 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/128 (47%), Positives = 79/128 (61%), Gaps = 14/128 (10%)

Query: 21  VFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMG 80
           VF CKTC +QF SFQALGGHRASHKKP   N +  +       K   H C ICG EF MG
Sbjct: 38  VFTCKTCLKQFHSFQALGGHRASHKKP---NNDALSSGLMKKVKTSSHPCPICGVEFPMG 94

Query: 81  QALGGHMRRHRIAMNES-------LNSAVIVSQSPPVLRRSNSSRRVFGLDLNLTPLEN- 132
           QALGGHMRRHR   NES       +  A++   +   L++S+S +RV  LDL+L  ++N 
Sbjct: 95  QALGGHMRRHR---NESGAAGGALVTRALLPEPTVTTLKKSSSGKRVACLDLSLGMVDNL 151

Query: 133 DLEVLFGK 140
           +L++  G+
Sbjct: 152 NLKLELGR 159

Transcriptional repressor involved in light acclimation, cold and oxidative stress responses. May regulate a collection of transcripts involved in response to high-light, cold and oxidative stress.

Arabidopsis thaliana (taxid: 3702)

>sp|Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1

 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 76/152 (50%), Gaps = 38/152 (25%)

Query: 21  VFECKTCNRQFPSFQALGGHRASHKKPRLI---------------------NGETKTLSS 59
           V+ECKTCNR F SFQALGGHRASHKKPR                       N   K   S
Sbjct: 114 VYECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGS 173

Query: 60  TTATKP--------KLHECSICGQEFAMGQALGGHMRRHRIAMN--ESLNSAVIVSQSPP 109
             A++         K+HECSICG EF  GQALGGHMRRHR A+     + +   VS++  
Sbjct: 174 ALASQASNIINKANKVHECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNST 233

Query: 110 -------VLRRSNSSRRVFGLDLNLTPLENDL 134
                  + R     R+   LDLNL   E+DL
Sbjct: 234 EEEIEINIGRSMEQQRKYLPLDLNLPAPEDDL 265

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q42453|ZAT7_ARATH Zinc finger protein ZAT7 OS=Arabidopsis thaliana GN=ZAT7 PE=2 SV=1

 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 76/120 (63%), Gaps = 13/120 (10%)

Query: 21  VFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATK--PKLHECSICGQEFA 78
           VF CKTC ++F SFQALGGHRASHKK  LIN +  +L  + + K     H C ICG +F 
Sbjct: 39  VFRCKTCLKEFSSFQALGGHRASHKK--LINSDNPSLLGSLSNKKTKTSHPCPICGVKFP 96

Query: 79  MGQALGGHMRRHRIAMNESLNSAVIVSQSPP------VLRRSNSSRRVFGLDLNLTPLEN 132
           MGQALGGHMRRHR   NE ++ +++     P       L++ +S +RV  LDL+L  +E+
Sbjct: 97  MGQALGGHMRRHR---NEKVSGSLVTRSFLPETTTVTALKKFSSGKRVACLDLDLDSMES 153

Probable transcription factor involved in oxidative stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LX85|ZAT8_ARATH Zinc finger protein ZAT8 OS=Arabidopsis thaliana GN=ZAT8 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/137 (45%), Positives = 80/137 (58%), Gaps = 20/137 (14%)

Query: 1   MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSST 60
           MLL+R        +KR    VF CKTC ++F SFQALGGHRASHKK  LIN    +L  +
Sbjct: 20  MLLSRVGECGGGGEKR----VFRCKTCLKEFSSFQALGGHRASHKK--LINSSDPSLLGS 73

Query: 61  TATK----PKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQS-------PP 109
            + K       H C ICG EF MGQALGGHMRRHR   +E  +   +V++S         
Sbjct: 74  LSNKKTKTATSHPCPICGVEFPMGQALGGHMRRHR---SEKASPGTLVTRSFLPETTTVT 130

Query: 110 VLRRSNSSRRVFGLDLN 126
            L++S+S +RV  LDL+
Sbjct: 131 TLKKSSSGKRVACLDLD 147

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M202|ZAT9_ARATH Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 12/122 (9%)

Query: 22  FECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSST-----TATKPKLHECSICGQE 76
           ++C+TC + F S+QALGGHRASHKK R+ N +T+  S T          ++HEC IC + 
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICLRV 232

Query: 77  FAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSRRVFGLDLNLTPLENDLEV 136
           FA GQALGGH R H +         + V+Q   V R  +  +R+  L+L     E+++ V
Sbjct: 233 FASGQALGGHKRSHGVG-------NLSVNQQRRVHRNESVKQRMIDLNLPAPTEEDEVSV 285

Query: 137 LF 138
           +F
Sbjct: 286 VF 287

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 55/98 (56%), Gaps = 10/98 (10%)

Query: 15  KRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSS------TTATKPKLH 68
           K+  +  FEC+TC + F S+QALGGHRASHKK      ET  L S         +    H
Sbjct: 153 KKKRNKWFECETCEKVFKSYQALGGHRASHKKK---IAETDQLGSDELKKKKKKSTSSHH 209

Query: 69  ECSICGQEFAMGQALGGHMRRHRIAMNE-SLNSAVIVS 105
           EC IC + F  GQALGGH R H  A NE +  S +I+S
Sbjct: 210 ECPICAKVFTSGQALGGHKRSHASANNEFTRRSGIIIS 247

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SHD0|ZAT4_ARATH Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 5/123 (4%)

Query: 22  FECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTT---ATKPKLHECSICGQEFA 78
           F+C+TC + F S+QALGGHRASHKK +    +T+ + +       + K+HEC IC + F 
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEKKVHECPICFRVFT 253

Query: 79  MGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSRRVFGLDLNLTPLENDLEVLF 138
            GQALGGH R H    N      + VSQ   +    +  +R+  L+L     E++  ++F
Sbjct: 254 SGQALGGHKRSH--GSNIGAGRGLSVSQIVQIEEEVSVKQRMIDLNLPAPNEEDETSLVF 311

Query: 139 GKM 141
            + 
Sbjct: 312 DEW 314

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW0|AZF3_ARATH Zinc finger protein AZF3 OS=Arabidopsis thaliana GN=AZF3 PE=1 SV=1

 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 63/120 (52%), Gaps = 16/120 (13%)

Query: 22  FECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQ 81
           ++C  C + F S+QALGGH+ASH   R + G  +   ST +T  K H CS+CG+ FA GQ
Sbjct: 75  YKCGVCYKTFSSYQALGGHKASH---RSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQ 131

Query: 82  ALGGHMRRHRIAMNESLNSAVIVSQSPPV-LRRSNSSRRVFGLDLNLTPLEN---DLEVL 137
           ALGGH R H             VS S  V      SS    G DLN+ P++    D EV+
Sbjct: 132 ALGGHKRCHYDGG---------VSNSEGVGSTSHVSSSSHRGFDLNIIPVQGFSPDDEVM 182

Transcriptional repressor probably involved in abiotic stress responses. Binds DNA in a sequence-specific manner and can repress the transactivation activity of other transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q96289|ZAT10_ARATH Zinc finger protein ZAT10 OS=Arabidopsis thaliana GN=ZAT10 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 72/140 (51%), Gaps = 13/140 (9%)

Query: 1   MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKK--PRLING------ 52
           MLL R NR + P    +    ++C  C++ F S+QALGGH+ASH+K   + ++G      
Sbjct: 60  MLLARDNR-QPPPPPAVEKLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHS 118

Query: 53  --ETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPV 110
                T S+ T    K H C+IC + F  GQALGGH R H    N    S+V  S+    
Sbjct: 119 TSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKRCHYEGNNNINTSSVSNSEGAGS 178

Query: 111 LRRSNSSRRVFGLDLNLTPL 130
               +SS R  G DLN+ P+
Sbjct: 179 TSHVSSSHR--GFDLNIPPI 196

Transcriptional repressor involved in abiotic stress responses. Can repress the stress responsive genes DREB1A and LTI78. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
255584547	192	zinc finger protein, putative [Ricinus c	0.866	0.677	0.632	3e-45
68655289	183	putative Cys2-His2 zinc finger transcrip	0.84	0.688	0.664	2e-42
255639717	173	unknown [Glycine max]	0.953	0.826	0.572	2e-41
357510467	172	Zinc finger protein [Medicago truncatula	0.913	0.796	0.607	4e-41
356505134	173	PREDICTED: zinc finger protein ZAT11-lik	0.953	0.826	0.572	4e-41
373839318	178	Cys2/His2-type zinc finger protein [Chry	0.893	0.752	0.613	1e-39
351726914	182	uncharacterized protein LOC100526874 [Gl	0.98	0.807	0.557	1e-39
55734106	190	zinc finger DNA-binding protein [Cathara	0.84	0.663	0.614	2e-39
388493542	186	unknown [Lotus japonicus]	0.853	0.688	0.597	3e-39
351727815	183	uncharacterized protein LOC100527151 [Gl	0.933	0.765	0.566	4e-39

>gi|255584547|ref|XP_002533000.1| zinc finger protein, putative [Ricinus communis] gi|223527211|gb|EEF29375.1| zinc finger protein, putative [Ricinus communis]

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 93/147 (63%), Positives = 109/147 (74%), Gaps = 17/147 (11%)

Query: 20  DVFECKTCNRQFPSFQALGGHRASHKKPRLING----------ETKTLSSTTATKPKLHE 69
           ++FECKTCN++F SFQALGGHRASHK+PRL  G          + + + S+   KPK+HE
Sbjct: 46  NMFECKTCNKKFSSFQALGGHRASHKRPRLFMGPAADSKSASSDDQAVHSSGTKKPKMHE 105

Query: 70  CSICGQEFAMGQALGGHMRRHRIA-MNESLNSAV------IVSQSPPVLRRSNSSRRVFG 122
           CSICG EFA+GQALGGHMRRHR A M ++  S+        V Q  PVLRRSNSS+RVFG
Sbjct: 106 CSICGVEFALGQALGGHMRRHRAAAMAQTFASSAKVKNTGCVVQKLPVLRRSNSSKRVFG 165

Query: 123 LDLNLTPLENDLEVLFGKMAPKVDLLM 149
           LDLNLTPLENDLE LFGKMAPKVDL +
Sbjct: 166 LDLNLTPLENDLEYLFGKMAPKVDLFV 192

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|68655289|emb|CAI77630.1| putative Cys2-His2 zinc finger transcription factor [Juglans regia]

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 89/134 (66%), Positives = 107/134 (79%), Gaps = 8/134 (5%)

Query: 20  DVFECKTCNRQFPSFQALGGHRASHKKPRLINGETK---TLSSTTATKPKLHECSICGQE 76
           DVFECKTCNRQF SFQALGGHRASHK+PRL+  E K   T   ++  KPK+HECS+CGQ+
Sbjct: 48  DVFECKTCNRQFSSFQALGGHRASHKRPRLMGEEHKVDRTKLQSSGNKPKMHECSLCGQK 107

Query: 77  FAMGQALGGHMRRHRIAMNESLNSA---VIVSQSPPVLRRSNSSRRVFGLDLNLTPLEND 133
           F+MGQALGGHMRRHR   NE L+S    +  ++ P +++RSNS+R V  LDLNLTPLEND
Sbjct: 108 FSMGQALGGHMRRHRA--NEGLSSIMNPLDHAKVPMLMKRSNSTRVVCSLDLNLTPLEND 165

Query: 134 LEVLFGKMAPKVDL 147
           L++LFGKMAPKVDL
Sbjct: 166 LKLLFGKMAPKVDL 179

Source: Juglans regia

Species: Juglans regia

Genus: Juglans

Family: Juglandaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255639717|gb|ACU20152.1| unknown [Glycine max]

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/145 (57%), Positives = 107/145 (73%), Gaps = 2/145 (1%)

Query: 1   MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT--LS 58
           M+L+   + K  ++ ++ +  FECKTCNR+F SFQALGGHRASHK+ +L   E K   +S
Sbjct: 20  MMLSHPQQNKKLLQTKIEAVKFECKTCNRKFSSFQALGGHRASHKRSKLEGDELKAHAIS 79

Query: 59  STTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSR 118
            +  +KPK+HECSICGQEF++GQALGGHMRRHR  +NE  +S   V    P L+RSNS+R
Sbjct: 80  LSLGSKPKMHECSICGQEFSLGQALGGHMRRHRTTINEDFSSIKQVITQVPDLKRSNSTR 139

Query: 119 RVFGLDLNLTPLENDLEVLFGKMAP 143
            +  LDLNLTP ENDL++LFGKMAP
Sbjct: 140 VIMCLDLNLTPFENDLKLLFGKMAP 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357510467|ref|XP_003625522.1| Zinc finger protein [Medicago truncatula] gi|355500537|gb|AES81740.1| Zinc finger protein [Medicago truncatula]

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 85/140 (60%), Positives = 106/140 (75%), Gaps = 3/140 (2%)

Query: 12  PIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE--TKTLSSTTATKPKLHE 69
           P +K  A   +ECKTCN++FPSFQALGGHRASHK+ +L   E  T + S +   KPK+HE
Sbjct: 34  PNQKSFAPVEYECKTCNKKFPSFQALGGHRASHKRSKLEGDELLTNSTSLSLGNKPKMHE 93

Query: 70  CSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSRRVFGLDLNLTP 129
           CSICGQ F++GQALGGHMRRH+  MNE ++S   V    PVL+R NS+ RV  LDLNLTP
Sbjct: 94  CSICGQNFSLGQALGGHMRRHKAIMNEEVSSMEQVVMKLPVLKRLNSA-RVMCLDLNLTP 152

Query: 130 LENDLEVLFGKMAPKVDLLM 149
           LENDL++LFGKMAP +D+L+
Sbjct: 153 LENDLKLLFGKMAPNLDVLV 172

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505134|ref|XP_003521347.1| PREDICTED: zinc finger protein ZAT11-like [Glycine max]

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 83/145 (57%), Positives = 106/145 (73%), Gaps = 2/145 (1%)

Query: 1   MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT--LS 58
           M+L+   + K  ++ ++ +  FECKTCNR+F SFQALGGHRASHK+ +L   E K   +S
Sbjct: 20  MMLSHPQQNKKLLQTKIEAVKFECKTCNRKFSSFQALGGHRASHKRSKLEGDELKAHAIS 79

Query: 59  STTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSR 118
            +   KPK+HECSICGQEF++GQALGGHMRRHR  +NE  +S   V    P L+RSNS+R
Sbjct: 80  LSLGNKPKMHECSICGQEFSLGQALGGHMRRHRTTINEDFSSIKQVITQVPDLKRSNSTR 139

Query: 119 RVFGLDLNLTPLENDLEVLFGKMAP 143
            +  LDLNLTP ENDL++LFGKMAP
Sbjct: 140 VIMCLDLNLTPFENDLKLLFGKMAP 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|373839318|gb|AEY76110.1| Cys2/His2-type zinc finger protein [Chrysanthemum x morifolium]

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/137 (61%), Positives = 100/137 (72%), Gaps = 3/137 (2%)

Query: 1   MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSST 60
           MLL+R N      +    S VFECKTCNRQFPSFQALGGHRASHKKPRL++G+  +    
Sbjct: 26  MLLSRGNTNMDSYQDDSVSRVFECKTCNRQFPSFQALGGHRASHKKPRLVDGDMTSHHHD 85

Query: 61  TA--TKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSR 118
           TA   KPK H+CSICG EFA+GQALGGHMRRHR A     ++++ +  S PV+++ N SR
Sbjct: 86  TALLIKPKTHKCSICGVEFAIGQALGGHMRRHRAATTTENHASLPLDLSTPVVKKVN-SR 144

Query: 119 RVFGLDLNLTPLENDLE 135
           RVF LDLNLTPLEND E
Sbjct: 145 RVFSLDLNLTPLENDFE 161

Source: Chrysanthemum x morifolium

Species: Chrysanthemum x morifolium

Genus: Chrysanthemum

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726914|ref|NP_001235351.1| uncharacterized protein LOC100526874 [Glycine max] gi|255631040|gb|ACU15884.1| unknown [Glycine max]

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 87/156 (55%), Positives = 107/156 (68%), Gaps = 9/156 (5%)

Query: 1   MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSS- 59
           M L+R  +   P+ K  +   FECKTCNR+FPSFQALGGHRASHKKP+    E K  +  
Sbjct: 25  MQLSRGQQKSKPLLKTFSPTEFECKTCNRKFPSFQALGGHRASHKKPKFEGEELKEEAKK 84

Query: 60  --TTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVS-----QSPPVLR 112
             +   KPK+HECSICG EF++GQALGGHMR+HR A +E+ N A   S        PVL+
Sbjct: 85  GLSLGNKPKMHECSICGMEFSLGQALGGHMRKHRGAASENNNEAFSSSIKQAISKVPVLK 144

Query: 113 RSNSSRRV-FGLDLNLTPLENDLEVLFGKMAPKVDL 147
           RSNS R +   +DLNLTPLENDL++LFG  AP+VDL
Sbjct: 145 RSNSKRVMCLEMDLNLTPLENDLKLLFGNKAPRVDL 180

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|55734106|emb|CAF74934.1| zinc finger DNA-binding protein [Catharanthus roseus]

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/140 (61%), Positives = 99/140 (70%), Gaps = 14/140 (10%)

Query: 21  VFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMG 80
           VFECKTCNRQFPSFQALGGHRASHK+PRL    T +     A KPK HECSICG EFA+G
Sbjct: 54  VFECKTCNRQFPSFQALGGHRASHKRPRLGGDLTLSQIPVAAAKPKTHECSICGLEFAIG 113

Query: 81  QALGGHMRRHRIAMNESLNSAVIVSQSPP------VLRRSN-----SSRRVFGLDLNLTP 129
           QALGGHMRRHR AM++S +     S SPP      V+++SN     + RRV+GLDLNLTP
Sbjct: 114 QALGGHMRRHRAAMSDSASGN---SASPPRDDRTVVVKKSNIVDDDNDRRVWGLDLNLTP 170

Query: 130 LENDLEVLFGKMAPKVDLLM 149
            EN LE   GK+AP VD  +
Sbjct: 171 FENHLEFQLGKIAPTVDCFL 190

Source: Catharanthus roseus

Species: Catharanthus roseus

Genus: Catharanthus

Family: Apocynaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493542|gb|AFK34837.1| unknown [Lotus japonicus]

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/139 (59%), Positives = 101/139 (72%), Gaps = 11/139 (7%)

Query: 22  FECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQ 81
           FECKTCNR+F SFQALGGHRASHKKP+L   E    S+   +KPK+H CSICGQEF++GQ
Sbjct: 47  FECKTCNRKFSSFQALGGHRASHKKPKLTGEEELKFSAAKPSKPKMHACSICGQEFSLGQ 106

Query: 82  ALGGHMRRHRIAMNE-------SLNSAVIVSQ---SPPVLRRSNSSRRV-FGLDLNLTPL 130
           ALGGHMRRHR   NE       S+  +  +S+   S PVL+RSNS R +   +DLNLTPL
Sbjct: 107 ALGGHMRRHRGDFNEEQGFRFSSIKHSEKISEAVKSTPVLKRSNSKRVMCLQMDLNLTPL 166

Query: 131 ENDLEVLFGKMAPKVDLLM 149
           ENDL++LFG  AP+VDL +
Sbjct: 167 ENDLKILFGNKAPRVDLAL 185

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727815|ref|NP_001235638.1| uncharacterized protein LOC100527151 [Glycine max] gi|255631668|gb|ACU16201.1| unknown [Glycine max]

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/143 (56%), Positives = 106/143 (74%), Gaps = 3/143 (2%)

Query: 1   MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING---ETKTL 57
           M+L+   + +  ++K++ +  FECKTCNR+F SFQALGGHRASHK+ +L      +   +
Sbjct: 20  MMLSHPQQNEKLLQKKIEAVEFECKTCNRKFSSFQALGGHRASHKRSKLEGDHELKAHAI 79

Query: 58  SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSS 117
           S + A KPK+HECSICGQEF++GQALGGHMRRHR  ++E  +S   V    PVL+RSNS+
Sbjct: 80  SLSLANKPKMHECSICGQEFSLGQALGGHMRRHRTTIHEDFSSIKQVITQMPVLKRSNST 139

Query: 118 RRVFGLDLNLTPLENDLEVLFGK 140
           R V  LDLNLTPLENDL++LFGK
Sbjct: 140 RVVTCLDLNLTPLENDLKLLFGK 162

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
TAIR|locus:2049811	178	ZAT11 "AT2G37430" [Arabidopsis	0.853	0.719	0.568	7.4e-34
TAIR|locus:2084046	175	AT3G53600 "AT3G53600" [Arabido	0.94	0.805	0.493	1.3e-31
TAIR|locus:2054548	156	AT2G28710 "AT2G28710" [Arabido	0.8	0.769	0.504	1e-27
TAIR|locus:2046153	286	AT2G28200 "AT2G28200" [Arabido	0.32	0.167	0.632	1.5e-23
TAIR|locus:2075261	170	AT3G46070 "AT3G46070" [Arabido	0.733	0.647	0.496	4.8e-23
TAIR|locus:2168073	162	RHL41 "AT5G59820" [Arabidopsis	0.78	0.722	0.472	1e-22
TAIR|locus:2142674	292	AT5G03510 "AT5G03510" [Arabido	0.506	0.260	0.469	1.9e-22
TAIR|locus:2075291	168	ZAT7 "AT3G46090" [Arabidopsis	0.713	0.636	0.491	4.3e-22
TAIR|locus:2075865	398	AT3G10470 "AT3G10470" [Arabido	0.213	0.080	0.75	9.9e-22
TAIR|locus:2075276	164	AT3G46080 "AT3G46080" [Arabido	0.78	0.713	0.481	4.9e-21

TAIR|locus:2049811 ZAT11 "AT2G37430" [Arabidopsis thaliana (taxid:3702)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 75/132 (56%), Positives = 91/132 (68%)

Query:    19 SDVFECKTCNRQFPSFQALGGHRASHKKPRLI--NGETKTLSSTTATKPKLHECSICGQE 76
             S+ FECKTCN++F SFQALGGHRASHKKP+L     + K LS+        H+CSIC Q 
Sbjct:    44 SNQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGN-HFHKCSICSQS 102

Query:    77 FAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSNSSRRVFGLDLNLTPLENDLEV 136
             F  GQALGGHMRRHR +M    +    +  S PVL+R  SS+R+  LDLNLTPLENDLE 
Sbjct:   103 FGTGQALGGHMRRHRSSMTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEY 162

Query:   137 LFGK-MAPKVDL 147
             +FGK   PK+D+
Sbjct:   163 IFGKTFVPKIDM 174

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2084046 AT3G53600 "AT3G53600" [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 77/156 (49%), Positives = 104/156 (66%)

Query:     1 MLLTRSNRAK-LPIKKRLASDV-----FECKTCNRQFPSFQALGGHRASHKKPRLINGET 54
             M+L+RS   K + +K+   S       FECKTCNR+F SFQALGGHRASHKKP+LI  + 
Sbjct:    22 MMLSRSFVVKQIDVKQSTGSKTNHNNHFECKTCNRKFDSFQALGGHRASHKKPKLIVDQE 81

Query:    55 KTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAM--NESLNSAVIVSQSPPVLR 112
             +           +H+C+IC Q F  GQALGGHMR+HR +M   +S+  +V+ S+  PV  
Sbjct:    82 QVKHRNKEND--MHKCTICDQMFGTGQALGGHMRKHRTSMITEQSIVPSVVYSR--PVFN 137

Query:   113 RSNSSRRVFGLDLNLTPLENDLEVLFGK-MAPKVDL 147
             R +SS+ +  LDLNLTPLENDL ++FGK + P++DL
Sbjct:   138 RCSSSKEI--LDLNLTPLENDLVLIFGKNLVPQIDL 171

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2054548 AT2G28710 "AT2G28710" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 63/125 (50%), Positives = 82/125 (65%)

Query:    19 SDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFA 78
             S VF CKTCN++FPSFQALGGHRASH++   + G      S    KP  HEC ICG EFA
Sbjct:    31 SRVFACKTCNKEFPSFQALGGHRASHRRSAALEGHAPP--SPKRVKPVKHECPICGAEFA 88

Query:    79 MGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRRSN--SSRRVFGLDLNLTPLEN-DLE 135
             +GQALGGHMR+HR         ++  + +P  +++S   + +RV  LDLNLTPLEN DL+
Sbjct:    89 VGQALGGHMRKHRGGSGGGGGRSLAPATAPVTMKKSGGGNGKRVLCLDLNLTPLENEDLK 148

Query:   136 VLFGK 140
             +  G+
Sbjct:   149 LELGR 153

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2046153 AT2G28200 "AT2G28200" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
 Identities = 31/49 (63%), Positives = 33/49 (67%)

Query:    21 VFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHE 69
             V+ECKTCNR F SFQALGGHRASHKKPR  + E KT    T  K    E
Sbjct:   114 VYECKTCNRTFSSFQALGGHRASHKKPRT-STEEKTRLPLTQPKSSASE 161

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2075261 AT3G46070 "AT3G46070" [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 62/125 (49%), Positives = 75/125 (60%)

Query:    21 VFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKL------HECSICG 74
             VF CKTC R F SFQALGGHRASH K  L N + K+L  +   KPK       H C ICG
Sbjct:    35 VFRCKTCERDFDSFQALGGHRASHSK--LTNSDDKSLPGSPKKKPKTTTTTTAHTCPICG 92

Query:    75 QEFAMGQALGGHMRRHRIAMNESLNSAVIVSQS--PPV-----LRRSNSSRRVFGLDLNL 127
              EF MGQALGGHMR+HR        S V+V+ S  P       L++S+S +RV  LD +L
Sbjct:    93 LEFPMGQALGGHMRKHRNEKEREKASNVLVTHSFMPETTTVTTLKKSSSGKRVACLDFDL 152

Query:   128 TPLEN 132
             T +E+
Sbjct:   153 TSVES 157

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2168073 RHL41 "AT5G59820" [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 59/125 (47%), Positives = 77/125 (61%)

Query:    21 VFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMG 80
             VF CKTC +QF SFQALGGHRASHKKP   N +  +       K   H C ICG EF MG
Sbjct:    38 VFTCKTCLKQFHSFQALGGHRASHKKP---NNDALSSGLMKKVKTSSHPCPICGVEFPMG 94

Query:    81 QALGGHMRRHR----IAMNESLNSAVIVSQSPPVLRRSNSSRRVFGLDLNLTPLEN-DLE 135
             QALGGHMRRHR     A    +  A++   +   L++S+S +RV  LDL+L  ++N +L+
Sbjct:    95 QALGGHMRRHRNESGAAGGALVTRALLPEPTVTTLKKSSSGKRVACLDLSLGMVDNLNLK 154

Query:   136 VLFGK 140
             +  G+
Sbjct:   155 LELGR 159

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0009631 "cold acclimation" evidence=IMP

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0006979 "response to oxidative stress" evidence=IEP;RCA;IMP

GO:0009408 "response to heat" evidence=IEP;IMP

GO:0009416 "response to light stimulus" evidence=IMP

GO:0009611 "response to wounding" evidence=IEP;RCA;IMP

GO:0042538 "hyperosmotic salinity response" evidence=IEP;RCA;IMP

GO:0010224 "response to UV-B" evidence=IEP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2142674 AT5G03510 "AT5G03510" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
 Identities = 38/81 (46%), Positives = 47/81 (58%)

Query:    58 SSTTATKP-KLHECSICGQEFAMGQALGGHMRRHR-IAMNESLNSAV---IVSQSPPVLR 112
             SS  + KP K HECSIC  EF+ GQALGGHMRRHR + +N +  SA+   I S S     
Sbjct:   181 SSDGSKKPEKTHECSICKAEFSSGQALGGHMRRHRGLTINANATSAIKTAISSSSHHHHE 240

Query:   113 RSNSSRRVFGLDLNLTPLEND 133
              S   +    LDLNL   E++
Sbjct:   241 ESIRPKNFLQLDLNLPAPEDE 261

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2075291 ZAT7 "AT3G46090" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 59/120 (49%), Positives = 77/120 (64%)

Query:    21 VFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTL-SSTTATKPKL-HECSICGQEFA 78
             VF CKTC ++F SFQALGGHRASHKK  LIN +  +L  S +  K K  H C ICG +F 
Sbjct:    39 VFRCKTCLKEFSSFQALGGHRASHKK--LINSDNPSLLGSLSNKKTKTSHPCPICGVKFP 96

Query:    79 MGQALGGHMRRHRIAMNESLNSAVIVSQSPP------VLRRSNSSRRVFGLDLNLTPLEN 132
             MGQALGGHMRRHR   NE ++ +++     P       L++ +S +RV  LDL+L  +E+
Sbjct:    97 MGQALGGHMRRHR---NEKVSGSLVTRSFLPETTTVTALKKFSSGKRVACLDLDLDSMES 153

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0045926 "negative regulation of growth" evidence=IGI

GO:0010200 "response to chitin" evidence=IEP

TAIR|locus:2075865 AT3G10470 "AT3G10470" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 9.9e-22, Sum P(3) = 9.9e-22
 Identities = 24/32 (75%), Positives = 28/32 (87%)

Query:    21 VFECKTCNRQFPSFQALGGHRASHKKPRLING 52
             V++CKTC+R FPSFQALGGHRASHKKP+   G
Sbjct:   181 VYQCKTCDRTFPSFQALGGHRASHKKPKAAMG 212

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009555 "pollen development" evidence=IMP

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2075276 AT3G46080 "AT3G46080" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 66/137 (48%), Positives = 82/137 (59%)

Query:     1 MLLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING-ETKTLSS 59
             MLL+R        +KR    VF CKTC ++F SFQALGGHRASHKK  LIN  +   L S
Sbjct:    20 MLLSRVGECGGGGEKR----VFRCKTCLKEFSSFQALGGHRASHKK--LINSSDPSLLGS 73

Query:    60 TTATKPKL---HECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQS--PPV---- 110
              +  K K    H C ICG EF MGQALGGHMRRHR   +E  +   +V++S  P      
Sbjct:    74 LSNKKTKTATSHPCPICGVEFPMGQALGGHMRRHR---SEKASPGTLVTRSFLPETTTVT 130

Query:   111 -LRRSNSSRRVFGLDLN 126
              L++S+S +RV  LDL+
Sbjct:   131 TLKKSSSGKRVACLDLD 147

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SLD4	ZAT11_ARATH	No assigned EC number	0.5639	0.86	0.7247	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	150
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	2e-07
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	4e-06

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 21 VFECKTCNRQFPSFQALGGHRASHKKP 47
          V  C  C + F S QALGGH+ SH   
Sbjct: 1  VHTCGVCGKTFSSLQALGGHKKSHCSL 27

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 41.1 bits (97), Expect = 4e-06
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 67 LHECSICGQEFAMGQALGGHMRRHR 91
          +H C +CG+ F+  QALGGH + H 
Sbjct: 1  VHTCGVCGKTFSSLQALGGHKKSHC 25

Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	150
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.8
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.8
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.65
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.51
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.45
KOG3576	267	consensus Ovo and related transcription factors [T	99.33
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.27
PHA02768	55	hypothetical protein; Provisional	99.22
KOG3576	267	consensus Ovo and related transcription factors [T	99.2
PHA00733	128	hypothetical protein	99.16
KOG3608	467	consensus Zn finger proteins [General function pre	99.08
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.03
KOG3608	467	consensus Zn finger proteins [General function pre	98.84
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.83
KOG3993	500	consensus Transcription factor (contains Zn finger	98.77
PHA00732	79	hypothetical protein	98.68
PHA00616	44	hypothetical protein	98.59
PHA00616	44	hypothetical protein	98.52
PHA02768	55	hypothetical protein; Provisional	98.36
PHA00733	128	hypothetical protein	98.31
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.29
PLN03086	567	PRLI-interacting factor K; Provisional	98.28
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.19
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.14
PLN03086	567	PRLI-interacting factor K; Provisional	98.13
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.97
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.93
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.88
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.76
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.63
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.53
smart00355	26	ZnF_C2H2 zinc finger.	97.49
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.45
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.39
smart00355	26	ZnF_C2H2 zinc finger.	97.34
PRK04860	160	hypothetical protein; Provisional	97.29
KOG3993	500	consensus Transcription factor (contains Zn finger	97.11
PHA00732	79	hypothetical protein	97.06
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.95
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.84
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.62
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.53
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.49
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.02
COG5048	467	FOG: Zn-finger [General function prediction only]	95.82
KOG1146	1406	consensus Homeobox protein [General function predi	95.59
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.47
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.38
COG5048	467	FOG: Zn-finger [General function prediction only]	94.96
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.86
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.6
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	92.4
PRK04860	160	hypothetical protein; Provisional	91.08
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	90.99
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	90.67
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	89.89
COG4049	65	Uncharacterized protein containing archaeal-type C	89.26
KOG2893	341	consensus Zn finger protein [General function pred	89.12
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	87.64
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	86.77
COG1592	166	Rubrerythrin [Energy production and conversion]	86.4
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	84.96
KOG1146	1406	consensus Homeobox protein [General function predi	84.78
COG5189	423	SFP1 Putative transcriptional repressor regulating	84.75
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	84.6
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	84.33
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	83.07
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	82.99
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	82.18
KOG4167	907	consensus Predicted DNA-binding protein, contains	81.4
COG4049	65	Uncharacterized protein containing archaeal-type C	80.59
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	80.54

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.80  E-value=3.1e-20  Score=131.60  Aligned_cols=109  Identities=21%  Similarity=0.257  Sum_probs=90.5

Q ss_pred             cccccccchhhhhcCC---CCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCc----cc------ccccccCCCCcee
Q 031966            3 LTRSNRAKLPIKKRLA---SDVFECKTCNRQFPSFQALGGHRASHKKPRLINGET----KT------LSSTTATKPKLHE   69 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~---~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~----~~------~h~~~h~~~kp~~   69 (150)
                      +...++|.+|.++|-.   .+.+.|++|||.|.+.-.|..|+|+|+  -++.|..    +.      .|+|+|+|||||.
T Consensus       140 ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~  217 (279)
T KOG2462|consen  140 YSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFS  217 (279)
T ss_pred             cccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCcc
Confidence            4567789999998853   467899999999999999999999996  4555555    22      7999999999999


Q ss_pred             ccccccccccchHHHHHhHhcccchhhcccccccccCCCCcccc
Q 031966           70 CSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPVLRR  113 (150)
Q Consensus        70 C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~  113 (150)
                      |..|+|+|+.+++|+.||++|.+.++..+..+...+...+-+.+
T Consensus       218 C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnK  261 (279)
T KOG2462|consen  218 CPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNK  261 (279)
T ss_pred             CCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHH
Confidence            99999999999999999999999999999888877766554444

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.80  E-value=1.1e-20  Score=133.85  Aligned_cols=84  Identities=24%  Similarity=0.382  Sum_probs=75.7

Q ss_pred             ccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCCCceecccc
Q 031966            4 TRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKPKLHECSIC   73 (150)
Q Consensus         4 ~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~kp~~C~~C   73 (150)
                      ..--.|+.|+++|+  -+++|.+|||.|.++.-|..|+|+|+|||||.|..+.          .|+.+|++.|+|.|..|
T Consensus       172 vSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C  249 (279)
T KOG2462|consen  172 VSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRC  249 (279)
T ss_pred             eehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcch
Confidence            34456899999998  6899999999999999999999999999999987721          79999999999999999


Q ss_pred             ccccccchHHHHHhHh
Q 031966           74 GQEFAMGQALGGHMRR   89 (150)
Q Consensus        74 gk~f~~~~~l~~H~~~   89 (150)
                      +|.|+..+.|.+|...
T Consensus       250 ~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  250 GKSFALKSYLNKHSES  265 (279)
T ss_pred             hhHHHHHHHHHHhhhh
Confidence            9999999999999764

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.65  E-value=2.1e-17  Score=131.45  Aligned_cols=44  Identities=16%  Similarity=0.444  Sum_probs=40.9

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHK   45 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~   45 (150)
                      ||...+.|+.|+|.|+||+||+|++||..|.++.+|+.|...|.
T Consensus       362 vfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~  405 (958)
T KOG1074|consen  362 VFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHR  405 (958)
T ss_pred             hcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeecc
Confidence            68889999999999999999999999999999999999976664

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.51  E-value=2.6e-15  Score=118.32  Aligned_cols=73  Identities=18%  Similarity=0.381  Sum_probs=62.4

Q ss_pred             CCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCCCceeccccccccccchHHHHH
Q 031966           17 LASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKPKLHECSICGQEFAMGQALGGH   86 (150)
Q Consensus        17 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H   86 (150)
                      +.+-+|.|+.|+|.|...+.|.+|.--|+|.|||+|..+.          .|.|.|+|||||.|..|+|.|+..+.+.+|
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQH  969 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQH  969 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhh
Confidence            3456788888888888888888888888888888887721          677888999999999999999999999999


Q ss_pred             hHh
Q 031966           87 MRR   89 (150)
Q Consensus        87 ~~~   89 (150)
                      |..
T Consensus       970 MNH  972 (1007)
T KOG3623|consen  970 MNH  972 (1007)
T ss_pred             hcc
Confidence            863

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.45  E-value=1e-14  Score=116.40  Aligned_cols=78  Identities=24%  Similarity=0.453  Sum_probs=70.2

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceecc---ccccccc
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECS---ICGQEFA   78 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~---~Cgk~f~   78 (150)
                      |+...+.|+.|+|+|+|||||+|.+||++|..+.+|+.|+-+|...-+++              -+|.|+   +|-+.|.
T Consensus       614 VlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R--------------~q~ScP~~~ic~~kft  679 (958)
T KOG1074|consen  614 VLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPAR--------------VQFSCPSTFICQKKFT  679 (958)
T ss_pred             cccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCcccc--------------ccccCCchhhhccccc
Confidence            45778899999999999999999999999999999999999997655542              578899   9999999


Q ss_pred             cchHHHHHhHhcccc
Q 031966           79 MGQALGGHMRRHRIA   93 (150)
Q Consensus        79 ~~~~l~~H~~~h~~~   93 (150)
                      ....|.+|+++|.+.
T Consensus       680 n~V~lpQhIriH~~~  694 (958)
T KOG1074|consen  680 NAVTLPQHIRIHLGG  694 (958)
T ss_pred             ccccccceEEeecCC
Confidence            999999999999854

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.33  E-value=1.4e-13  Score=94.16  Aligned_cols=74  Identities=23%  Similarity=0.418  Sum_probs=58.1

Q ss_pred             CCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCc----c------cccccccCCCCceeccccccccccchHHHHHh
Q 031966           18 ASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGET----K------TLSSTTATKPKLHECSICGQEFAMGQALGGHM   87 (150)
Q Consensus        18 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~----~------~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~   87 (150)
                      +.-.|.|.+|+|.|.....|.+|++-|...+.+.|..    +      ..|.++|+|.+||+|..|+|+|.....|..|.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            3456888888888888888888888887766655433    1      17888889999999999999999999999998


Q ss_pred             H-hcc
Q 031966           88 R-RHR   91 (150)
Q Consensus        88 ~-~h~   91 (150)
                      + +|.
T Consensus       194 ~kvhg  198 (267)
T KOG3576|consen  194 KKVHG  198 (267)
T ss_pred             HHHcC
Confidence            6 454

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.27  E-value=9.6e-13  Score=104.14  Aligned_cols=51  Identities=12%  Similarity=0.288  Sum_probs=27.3

Q ss_pred             cccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966            3 LTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      |.+.++|.+|.--|+|.|||+|.+|.|+|..+.+|..|+|.|+|+|||+|+
T Consensus       904 FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCd  954 (1007)
T KOG3623|consen  904 FQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCD  954 (1007)
T ss_pred             HHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhh
Confidence            445555555555555555555555555555555555555555555555553

>PHA02768 hypothetical protein; Provisional

Probab=99.22  E-value=5.4e-12  Score=69.13  Aligned_cols=44  Identities=16%  Similarity=0.201  Sum_probs=39.6

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHH
Q 031966           21 VFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALG   84 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~   84 (150)
                      -|.|+.||+.|...++|..|+++|                  +  ++|+|..|++.|+..+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H------------------~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKH------------------N--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhc------------------C--CcccCCcccceecccceeE
Confidence            389999999999999999999999                  4  6889999999999887764

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.20  E-value=2.9e-12  Score=87.72  Aligned_cols=93  Identities=17%  Similarity=0.166  Sum_probs=74.1

Q ss_pred             cccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCc----cc------ccc-ccc---------
Q 031966            3 LTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGET----KT------LSS-TTA---------   62 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~----~~------~h~-~~h---------   62 (150)
                      |.-..-|.+|++.|+.-+.|-|..|||.|...-.|++|+|+|+|.+||+|..    ++      .|. ++|         
T Consensus       127 F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yayk  206 (267)
T KOG3576|consen  127 FGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYK  206 (267)
T ss_pred             hhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHH
Confidence            4445567889999999999999999999999999999999999999999866    11      222 122         


Q ss_pred             -CCCCceeccccccccccchHHHHHhHhcccchh
Q 031966           63 -TKPKLHECSICGQEFAMGQALGGHMRRHRIAMN   95 (150)
Q Consensus        63 -~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~   95 (150)
                       ..+|-|.|..||..-.....+..|++.|+...+
T Consensus       207 err~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  207 ERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence             456789999999999999999999998776543

>PHA00733 hypothetical protein

Probab=99.16  E-value=3.3e-11  Score=78.50  Aligned_cols=64  Identities=20%  Similarity=0.344  Sum_probs=52.5

Q ss_pred             ccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHh
Q 031966            8 RAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHM   87 (150)
Q Consensus         8 ~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~   87 (150)
                      .|..|+..+ +++||.|+.||+.|.....|..|++.|                    +.+|.|..|++.|.....|..|+
T Consensus        61 ~l~~~~~~~-~~kPy~C~~Cgk~Fss~s~L~~H~r~h--------------------~~~~~C~~CgK~F~~~~sL~~H~  119 (128)
T PHA00733         61 YLYKLLTSK-AVSPYVCPLCLMPFSSSVSLKQHIRYT--------------------EHSKVCPVCGKEFRNTDSTLDHV  119 (128)
T ss_pred             HHHhhcccC-CCCCccCCCCCCcCCCHHHHHHHHhcC--------------------CcCccCCCCCCccCCHHHHHHHH
Confidence            345554444 588999999999999999999998865                    24689999999999999999999


Q ss_pred             Hhccc
Q 031966           88 RRHRI   92 (150)
Q Consensus        88 ~~h~~   92 (150)
                      ...++
T Consensus       120 ~~~h~  124 (128)
T PHA00733        120 CKKHN  124 (128)
T ss_pred             HHhcC
Confidence            87654

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.08  E-value=2.1e-11  Score=89.72  Aligned_cols=96  Identities=17%  Similarity=0.234  Sum_probs=74.0

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhc--CCCCCCCCCc--cc---------------------
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASH--KKPRLINGET--KT---------------------   56 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h--~~~k~~~c~~--~~---------------------   56 (150)
                      +|..+..|+.|++.|++||...|..||..|++...|-.|.+..  ....+|.|..  +.                     
T Consensus       188 ~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCp  267 (467)
T KOG3608|consen  188 HMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCP  267 (467)
T ss_pred             hhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhccccc
Confidence            3667888999999999999999999999999999888887543  3344555533  00                     


Q ss_pred             -------------cccc-ccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           57 -------------LSST-TATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        57 -------------~h~~-~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                                   .|++ .|+..|||+|..|.+.|.+.+.|.+|..+|. +....+
T Consensus       268 lCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C  322 (467)
T KOG3608|consen  268 LCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQC  322 (467)
T ss_pred             ccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceec
Confidence                         3443 4688999999999999999999999999887 444443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.03  E-value=5.4e-11  Score=56.05  Aligned_cols=26  Identities=12%  Similarity=0.525  Sum_probs=23.8

Q ss_pred             ccchhhhhcCCCCceecCCCCCcCCC
Q 031966            8 RAKLPIKKRLASDVFECKTCNRQFPS   33 (150)
Q Consensus         8 ~l~~h~~~h~~~~~~~C~~C~k~f~~   33 (150)
                      +|..|+++|+|++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47899999999999999999999863

...

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.84  E-value=2.5e-09  Score=78.99  Aligned_cols=90  Identities=19%  Similarity=0.361  Sum_probs=72.0

Q ss_pred             Cccccccccchhhh-hcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCc--cc----------cccc-ccCC--
Q 031966            1 MLLTRSNRAKLPIK-KRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGET--KT----------LSST-TATK--   64 (150)
Q Consensus         1 m~f~~~~~l~~h~~-~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~--~~----------~h~~-~h~~--   64 (150)
                      |.....++|..|++ .|+.+|||+|+.|++.|.+.+.|..|..+|+ +-.|.|+.  ..          .|.+ .|.|  
T Consensus       271 mtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~n  349 (467)
T KOG3608|consen  271 MTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNN  349 (467)
T ss_pred             cCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCC
Confidence            44556788999998 5888999999999999999999999999998 66788765  11          3443 3334  


Q ss_pred             CCceeccccccccccchHHHHHhHhcc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      +-+|.|..|.+.|.+..+|..|+...+
T Consensus       350 p~~Y~CH~Cdr~ft~G~~L~~HL~kkH  376 (467)
T KOG3608|consen  350 PILYACHCCDRFFTSGKSLSAHLMKKH  376 (467)
T ss_pred             CCceeeecchhhhccchhHHHHHHHhh
Confidence            457999999999999999999986533

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.83  E-value=2.5e-09  Score=50.28  Aligned_cols=26  Identities=35%  Similarity=0.649  Sum_probs=22.2

Q ss_pred             HHHhhHHhcCCCCCCCCCcccccccccCCCCceecccccccccc
Q 031966           36 ALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAM   79 (150)
Q Consensus        36 ~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~   79 (150)
                      +|.+|+++|                  ++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H------------------~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTH------------------TGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHH------------------SSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhc------------------CCCCCCCCCCCcCeeCc
Confidence            477888887                  88899999999999964

...

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.77  E-value=2.1e-09  Score=80.90  Aligned_cols=91  Identities=20%  Similarity=0.338  Sum_probs=62.5

Q ss_pred             cccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCC-CCc---cc---------cccccc--CCCCc
Q 031966            3 LTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLIN-GET---KT---------LSSTTA--TKPKL   67 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~-c~~---~~---------~h~~~h--~~~kp   67 (150)
                      |...+.|..|.-...----|+|.+|+|.|+.+.||..|+|+|.-..... -..   +.         .-.+..  ..+--
T Consensus       277 YeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi  356 (500)
T KOG3993|consen  277 YEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGI  356 (500)
T ss_pred             hhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCce
Confidence            4556677777644444445999999999999999999999995322211 000   00         000100  22337


Q ss_pred             eeccccccccccchHHHHHhHhcccc
Q 031966           68 HECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      |.|.+|||.|.+...|+.|+.+|...
T Consensus       357 ~~C~~C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  357 FSCHTCGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             eecHHhhhhhHHHHHHHHhHHhhhcc
Confidence            99999999999999999999987654

>PHA00732 hypothetical protein

Probab=98.68  E-value=1.5e-08  Score=60.45  Aligned_cols=47  Identities=28%  Similarity=0.631  Sum_probs=38.8

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHh-cCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcc
Q 031966           21 VFECKTCNRQFPSFQALGGHRAS-HKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~-h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      ||.|..||+.|.....|..|++. |                  .   ++.|+.||+.|.   .|..|..++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H------------------~---~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNH------------------T---LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhccc------------------C---CCccCCCCCEeC---ChhhhhcccC
Confidence            68999999999999999999984 5                  2   357999999997   4778875543

>PHA00616 hypothetical protein

Probab=98.59  E-value=1.9e-08  Score=52.58  Aligned_cols=33  Identities=21%  Similarity=0.351  Sum_probs=28.4

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           21 VFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      ||.|..||+.|...+.|..|++.|+|++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            689999999999999999999999666555543

>PHA00616 hypothetical protein

Probab=98.52  E-value=2.9e-08  Score=51.93  Aligned_cols=33  Identities=18%  Similarity=0.309  Sum_probs=29.9

Q ss_pred             ceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           67 LHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      ||.|..||+.|...+.|..|++.|+|+.+...+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            689999999999999999999999999776554

>PHA02768 hypothetical protein; Provisional

Probab=98.36  E-value=2.7e-07  Score=50.66  Aligned_cols=25  Identities=32%  Similarity=0.723  Sum_probs=23.9

Q ss_pred             ceeccccccccccchHHHHHhHhcc
Q 031966           67 LHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      -|.|++||+.|+..++|..|+++|+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~   29 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN   29 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC
Confidence            4799999999999999999999999

>PHA00733 hypothetical protein

Probab=98.31  E-value=2.6e-07  Score=60.26  Aligned_cols=72  Identities=13%  Similarity=0.031  Sum_probs=52.1

Q ss_pred             CCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccchhhc
Q 031966           18 ASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNES   97 (150)
Q Consensus        18 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~   97 (150)
                      ..+++.|.+|.+.|..+..|..+....            .++. +.+++||.|..||+.|.....|..|++.|.  .+..
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~------------~~~~-~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~--~~~~  101 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLY------------KLLT-SKAVSPYVCPLCLMPFSSSVSLKQHIRYTE--HSKV  101 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHH------------hhcc-cCCCCCccCCCCCCcCCCHHHHHHHHhcCC--cCcc
Confidence            357899999999999988888773221            1111 245789999999999999999999999763  2344


Q ss_pred             ccccccc
Q 031966           98 LNSAVIV  104 (150)
Q Consensus        98 ~~~~~~~  104 (150)
                      +..+...
T Consensus       102 C~~CgK~  108 (128)
T PHA00733        102 CPVCGKE  108 (128)
T ss_pred             CCCCCCc
Confidence            4444433

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.29  E-value=4.2e-07  Score=41.24  Aligned_cols=23  Identities=48%  Similarity=0.982  Sum_probs=21.6

Q ss_pred             eeccccccccccchHHHHHhHhc
Q 031966           68 HECSICGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~h   90 (150)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.28  E-value=1.4e-06  Score=69.21  Aligned_cols=80  Identities=13%  Similarity=0.245  Sum_probs=58.9

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC--cc------cccccccCCCCceecccccccccc----------c
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE--TK------TLSSTTATKPKLHECSICGQEFAM----------G   80 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~--~~------~~h~~~h~~~kp~~C~~Cgk~f~~----------~   80 (150)
                      ++.+.|..|++.|. ...|..|+.+|.  +++.|.  ..      ..|..+|..++++.|..|++.|..          .
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~CpCg~~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~  527 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCPCGVVLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRL  527 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCCCCCCcchhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhh
Confidence            45578999999986 577899998874  566663  21      168888899999999999998852          3


Q ss_pred             hHHHHHhHhcccchhhcccccc
Q 031966           81 QALGGHMRRHRIAMNESLNSAV  102 (150)
Q Consensus        81 ~~l~~H~~~h~~~~~~~~~~~~  102 (150)
                      ..|..|..++ |.+...|..+.
T Consensus       528 s~Lt~HE~~C-G~rt~~C~~Cg  548 (567)
T PLN03086        528 RGMSEHESIC-GSRTAPCDSCG  548 (567)
T ss_pred             hhHHHHHHhc-CCcceEccccC
Confidence            4788888885 66666665543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.19  E-value=8.2e-07  Score=65.04  Aligned_cols=71  Identities=18%  Similarity=0.409  Sum_probs=48.5

Q ss_pred             CCCceecCC--CCCcCCCHHHHHhhHHh-cCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhH
Q 031966           18 ASDVFECKT--CNRQFPSFQALGGHRAS-HKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMR   88 (150)
Q Consensus        18 ~~~~~~C~~--C~k~f~~~~~L~~H~~~-h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~   88 (150)
                      ++|||+|++  |.|.|.....|+-|+.- |...+.-.-..--.+...-...|||.|++|+|.|.....|+-|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            469999986  99999999999999742 322111110000011112256799999999999999999988864

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.14  E-value=1.3e-06  Score=39.55  Aligned_cols=23  Identities=30%  Similarity=0.710  Sum_probs=21.4

Q ss_pred             eecCCCCCcCCCHHHHHhhHHhc
Q 031966           22 FECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        22 ~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999865

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.13  E-value=2.9e-06  Score=67.41  Aligned_cols=77  Identities=17%  Similarity=0.264  Sum_probs=60.6

Q ss_pred             ccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc--------------------ccccccCCC
Q 031966            6 SNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT--------------------LSSTTATKP   65 (150)
Q Consensus         6 ~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~--------------------~h~~~h~~~   65 (150)
                      ...|..|+++|+  +++.|. ||+.+ ....|..|+.+|..++++.|..+.                    .|... .|.
T Consensus       465 ~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~-CG~  539 (567)
T PLN03086        465 QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI-CGS  539 (567)
T ss_pred             hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh-cCC
Confidence            356889999874  899999 99765 668999999999999999886521                    35555 488


Q ss_pred             CceeccccccccccchHHHHHhH
Q 031966           66 KLHECSICGQEFAMGQALGGHMR   88 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~   88 (150)
                      +++.|..||+.|..+ .|..|+.
T Consensus       540 rt~~C~~Cgk~Vrlr-dm~~H~~  561 (567)
T PLN03086        540 RTAPCDSCGRSVMLK-EMDIHQI  561 (567)
T ss_pred             cceEccccCCeeeeh-hHHHHHH
Confidence            999999999988655 4566664

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.97  E-value=3.8e-06  Score=39.57  Aligned_cols=26  Identities=38%  Similarity=0.618  Sum_probs=23.9

Q ss_pred             ceeccccccccccchHHHHHhHhccc
Q 031966           67 LHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      ||.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999998764

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.93  E-value=2.1e-05  Score=43.45  Aligned_cols=51  Identities=25%  Similarity=0.494  Sum_probs=38.4

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHh-cCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcc
Q 031966           21 VFECKTCNRQFPSFQALGGHRAS-HKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~-h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      .|.|+.|++. .....|..|... |.                 ...+.+.|+.|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~-----------------~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHR-----------------SESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCc-----------------CCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            4899999995 556789999754 42                 2235789999998654  49999998754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.88  E-value=9e-06  Score=36.83  Aligned_cols=24  Identities=42%  Similarity=0.899  Sum_probs=20.1

Q ss_pred             eeccccccccccchHHHHHhHhcc
Q 031966           68 HECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      |.|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998763

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.76  E-value=1.4e-05  Score=37.55  Aligned_cols=25  Identities=44%  Similarity=0.869  Sum_probs=23.1

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhcC
Q 031966           21 VFECKTCNRQFPSFQALGGHRASHK   45 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h~   45 (150)
                      ||.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998873

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.63  E-value=3.9e-05  Score=34.63  Aligned_cols=23  Identities=35%  Similarity=0.756  Sum_probs=19.5

Q ss_pred             eecCCCCCcCCCHHHHHhhHHhc
Q 031966           22 FECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        22 ~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            78999999999999999999875

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.53  E-value=5.8e-05  Score=46.56  Aligned_cols=68  Identities=21%  Similarity=0.301  Sum_probs=22.3

Q ss_pred             ecCCCCCcCCCHHHHHhhHHhcCC-CCCC---CCCc--ccccccccCCCCceeccccccccccchHHHHHhHhcc
Q 031966           23 ECKTCNRQFPSFQALGGHRASHKK-PRLI---NGET--KTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        23 ~C~~C~k~f~~~~~L~~H~~~h~~-~k~~---~c~~--~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      +|..|+..|.....|..|+....+ ..+-   ....  .....+. .....+.|..|++.|.....|..|++.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRK-KVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             -------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             Ccccccccccccccccccccccccccccccccccccccccccccc-ccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            489999999999999999854322 2110   0000  0111111 12237999999999999999999999753

>smart00355 ZnF_C2H2 zinc finger

Probab=97.49  E-value=6.4e-05  Score=34.42  Aligned_cols=25  Identities=40%  Similarity=0.709  Sum_probs=22.3

Q ss_pred             eeccccccccccchHHHHHhHhccc
Q 031966           68 HECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      |.|..|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            5799999999999999999997753

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.45  E-value=0.00011  Score=39.47  Aligned_cols=33  Identities=18%  Similarity=0.396  Sum_probs=24.1

Q ss_pred             CCCCceeccccccccccchHHHHHhHhcccchh
Q 031966           63 TKPKLHECSICGQEFAMGQALGGHMRRHRIAMN   95 (150)
Q Consensus        63 ~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~   95 (150)
                      ..+.|..|++|+..++...+|++|+.++++.++
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            456899999999999999999999998877665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.39  E-value=0.00016  Score=38.77  Aligned_cols=32  Identities=13%  Similarity=0.202  Sum_probs=22.6

Q ss_pred             CCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           17 LASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        17 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      ..+.|-.|++|+..+.+..+|.+|+.++.+.|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            46789999999999999999999997765444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.34  E-value=0.00018  Score=32.85  Aligned_cols=24  Identities=33%  Similarity=0.693  Sum_probs=21.8

Q ss_pred             eecCCCCCcCCCHHHHHhhHHhcC
Q 031966           22 FECKTCNRQFPSFQALGGHRASHK   45 (150)
Q Consensus        22 ~~C~~C~k~f~~~~~L~~H~~~h~   45 (150)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998773

>PRK04860 hypothetical protein; Provisional

Probab=97.29  E-value=0.00015  Score=49.05  Aligned_cols=40  Identities=18%  Similarity=0.444  Sum_probs=32.8

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccch
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQ   81 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~   81 (150)
                      -+|.|. |++   ....+.+|.++|                  +++++|.|..|++.|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~------------------~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVV------------------RGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHh------------------cCCccEECCCCCceeEEec
Confidence            479998 987   566788899988                  7888999999999886543

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.11  E-value=8.7e-05  Score=56.55  Aligned_cols=57  Identities=23%  Similarity=0.461  Sum_probs=46.5

Q ss_pred             eecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccchhh
Q 031966           22 FECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNE   96 (150)
Q Consensus        22 ~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~   96 (150)
                      |.|..|...|...-.|.+|+-..                  ..-.-|+|++|+|.|+-..+|..|+|.|......
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~R------------------IV~vEYrCPEC~KVFsCPANLASHRRWHKPR~ea  324 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPR------------------IVHVEYRCPECDKVFSCPANLASHRRWHKPRPEA  324 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCe------------------eEEeeecCCcccccccCchhhhhhhcccCCchhh
Confidence            88999999999999999886322                  1224599999999999999999999999765433

>PHA00732 hypothetical protein

Probab=97.06  E-value=0.00046  Score=41.14  Aligned_cols=37  Identities=27%  Similarity=0.408  Sum_probs=28.6

Q ss_pred             ceeccccccccccchHHHHHhHh-cccchhhcccccccccC
Q 031966           67 LHECSICGQEFAMGQALGGHMRR-HRIAMNESLNSAVIVSQ  106 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~-h~~~~~~~~~~~~~~~~  106 (150)
                      ||.|..||+.|.....|..|++. |.+.   .+..+.....
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~---~C~~CgKsF~   38 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLT---KCPVCNKSYR   38 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCC---ccCCCCCEeC
Confidence            68899999999999999999984 6643   4555554444

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.95  E-value=0.00046  Score=31.57  Aligned_cols=23  Identities=30%  Similarity=0.730  Sum_probs=21.1

Q ss_pred             eeccccccccccchHHHHHhHhc
Q 031966           68 HECSICGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~h   90 (150)
                      |.|..|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999764

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.84  E-value=0.00062  Score=31.12  Aligned_cols=23  Identities=39%  Similarity=0.716  Sum_probs=21.0

Q ss_pred             eecCCCCCcCCCHHHHHhhHHhc
Q 031966           22 FECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        22 ~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      |.|.+|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999998764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.62  E-value=0.0014  Score=29.68  Aligned_cols=23  Identities=26%  Similarity=0.602  Sum_probs=18.4

Q ss_pred             eeccccccccccchHHHHHhHhcc
Q 031966           68 HECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      |.|..|+.... ...|.+|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998887 889999999865

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.53  E-value=0.0011  Score=30.94  Aligned_cols=22  Identities=36%  Similarity=0.694  Sum_probs=20.3

Q ss_pred             eecCCCCCcCCCHHHHHhhHHh
Q 031966           22 FECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        22 ~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      |.|..|++.|.....+..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999865

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.49  E-value=0.00084  Score=31.41  Aligned_cols=22  Identities=27%  Similarity=0.605  Sum_probs=20.3

Q ss_pred             eeccccccccccchHHHHHhHh
Q 031966           68 HECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.02  E-value=0.0045  Score=28.42  Aligned_cols=21  Identities=33%  Similarity=0.700  Sum_probs=17.8

Q ss_pred             eeccccccccccchHHHHHhHh
Q 031966           68 HECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      ..|+.||+.| ..+.|.+|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3699999999 78889999765

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.82  E-value=0.0048  Score=47.24  Aligned_cols=51  Identities=20%  Similarity=0.314  Sum_probs=45.4

Q ss_pred             ccccccccchhhh--hcCCC--CceecC--CCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966            2 LLTRSNRAKLPIK--KRLAS--DVFECK--TCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus         2 ~f~~~~~l~~h~~--~h~~~--~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      .|.....|..|.+  .|+++  +++.|.  .|++.|.+...+..|...|.+.+++.+
T Consensus       298 ~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         298 SFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             CccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            4778889999999  89999  999999  799999999999999999987776554

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=95.59  E-value=0.011  Score=51.26  Aligned_cols=85  Identities=15%  Similarity=0.172  Sum_probs=57.8

Q ss_pred             cccccchhhh-hcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC-CCCCcccccc------cccCCCCceeccccccc
Q 031966            5 RSNRAKLPIK-KRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL-INGETKTLSS------TTATKPKLHECSICGQE   76 (150)
Q Consensus         5 ~~~~l~~h~~-~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~-~~c~~~~~h~------~~h~~~kp~~C~~Cgk~   76 (150)
                      +...+..|+. .|+-.+.|.|..|+..|.....|..|+|.-.-+.. --|.....|.      ..-.+.+||.|..|..+
T Consensus       448 s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~s  527 (1406)
T KOG1146|consen  448 SKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYS  527 (1406)
T ss_pred             hhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeee
Confidence            3334444443 45556889999999999999999999987321111 1122211111      12245689999999999


Q ss_pred             cccchHHHHHhHh
Q 031966           77 FAMGQALGGHMRR   89 (150)
Q Consensus        77 f~~~~~l~~H~~~   89 (150)
                      +....+|.+|+..
T Consensus       528 tttng~LsihlqS  540 (1406)
T KOG1146|consen  528 TTTNGNLSIHLQS  540 (1406)
T ss_pred             eecchHHHHHHHH
Confidence            9999999999974

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.47  E-value=0.013  Score=26.83  Aligned_cols=21  Identities=29%  Similarity=0.615  Sum_probs=17.6

Q ss_pred             eecCCCCCcCCCHHHHHhhHHh
Q 031966           22 FECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        22 ~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      ..|..||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 67888999764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.38  E-value=0.014  Score=26.24  Aligned_cols=22  Identities=23%  Similarity=0.510  Sum_probs=17.7

Q ss_pred             eecCCCCCcCCCHHHHHhhHHhc
Q 031966           22 FECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        22 ~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      |+|..|+.... ...|..|++.|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            78999999888 89999999875

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.96  E-value=0.0087  Score=45.82  Aligned_cols=61  Identities=26%  Similarity=0.419  Sum_probs=51.9

Q ss_pred             CceecCCCCCcCCCHHHHHhhHH--hcCCCCCCCCCcccccccccCCC--Cceecc--ccccccccchHHHHHhHhcccc
Q 031966           20 DVFECKTCNRQFPSFQALGGHRA--SHKKPRLINGETKTLSSTTATKP--KLHECS--ICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~--~h~~~k~~~c~~~~~h~~~h~~~--kp~~C~--~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      .++.|..|...|.....|..|.+  .|                  .++  +|+.|+  .|++.|.+...+..|...|.+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h------------------~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  349 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNH------------------SGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSI  349 (467)
T ss_pred             cCCCCccccCCcccccccccccccccc------------------ccccCCceeeeccCCCccccccccccCCcccccCC
Confidence            46889999999999999999988  66                  666  888888  7999999999999999999887


Q ss_pred             hhhcc
Q 031966           94 MNESL   98 (150)
Q Consensus        94 ~~~~~   98 (150)
                      .....
T Consensus       350 ~~~~~  354 (467)
T COG5048         350 SPAKE  354 (467)
T ss_pred             Ccccc
Confidence            65443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.86  E-value=0.029  Score=27.54  Aligned_cols=23  Identities=30%  Similarity=0.521  Sum_probs=20.4

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHh
Q 031966           21 VFECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      +|.|.+|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.60  E-value=0.022  Score=27.97  Aligned_cols=23  Identities=17%  Similarity=0.472  Sum_probs=20.7

Q ss_pred             ceeccccccccccchHHHHHhHh
Q 031966           67 LHECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      +|.|..|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=92.40  E-value=0.12  Score=31.37  Aligned_cols=24  Identities=42%  Similarity=0.713  Sum_probs=21.5

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhc
Q 031966           21 VFECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            589999999999999999999876

>PRK04860 hypothetical protein; Provisional

Probab=91.08  E-value=0.17  Score=34.26  Aligned_cols=35  Identities=14%  Similarity=0.049  Sum_probs=29.4

Q ss_pred             CceeccccccccccchHHHHHhHhcccchhhcccccccc
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIV  104 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~~  104 (150)
                      -+|.|. |++   ....+.+|.++|+++++..+..+...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~  152 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGET  152 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCce
Confidence            479998 988   78889999999999998888776543

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=90.99  E-value=0.072  Score=37.87  Aligned_cols=54  Identities=13%  Similarity=0.260  Sum_probs=31.5

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCc-----eeccccccccccc
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKL-----HECSICGQEFAMG   80 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp-----~~C~~Cgk~f~~~   80 (150)
                      ++...|++|++.|....-.....+.-..+.-+.        ....+..|     ..|+.||.+|...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~--------~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFC--------PRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCc--------cccCCCCCeeeeEEECCCCCCccccc
Confidence            467899999999988765554443321111110        00123333     5799999887654

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=90.67  E-value=0.16  Score=32.10  Aligned_cols=17  Identities=29%  Similarity=0.587  Sum_probs=13.8

Q ss_pred             CCCceeccccccccccc
Q 031966           64 KPKLHECSICGQEFAMG   80 (150)
Q Consensus        64 ~~kp~~C~~Cgk~f~~~   80 (150)
                      +..|-.|+.||..|.-.
T Consensus        23 nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   23 NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCCCccCCCCCCccCcc
Confidence            34688899999998766

The function of members of this family is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=89.89  E-value=0.24  Score=27.04  Aligned_cols=34  Identities=24%  Similarity=0.338  Sum_probs=23.2

Q ss_pred             ceeccccccccccchHHHHHhHh-cccch-hhccccc
Q 031966           67 LHECSICGQEFAMGQALGGHMRR-HRIAM-NESLNSA  101 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~-h~~~~-~~~~~~~  101 (150)
                      .|.|++||+. .....|..|... |..+. ...+..+
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC   37 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPIC   37 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCc
Confidence            4889999995 456789999875 55543 3344444

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=89.26  E-value=0.21  Score=27.40  Aligned_cols=32  Identities=16%  Similarity=0.309  Sum_probs=26.4

Q ss_pred             ccCCCCceeccccccccccchHHHHHhHhccc
Q 031966           61 TATKPKLHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        61 ~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      +-.||.-+.|+.||..|.......+|...-++
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            33688889999999999999999999865333

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=89.12  E-value=0.17  Score=36.39  Aligned_cols=47  Identities=34%  Similarity=0.618  Sum_probs=36.2

Q ss_pred             ecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHH-hHhcc
Q 031966           23 ECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGH-MRRHR   91 (150)
Q Consensus        23 ~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H-~~~h~   91 (150)
                      .|=.|++.|-....|..|++                      .|-|+|.+|.|..-+...|..| +++|.
T Consensus        12 wcwycnrefddekiliqhqk----------------------akhfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQK----------------------AKHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhhhhh----------------------hccceeeeehhhhccCCCceeehhhhhh
Confidence            48889999999988888864                      3578999999777666677666 45554

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=87.64  E-value=0.41  Score=23.31  Aligned_cols=10  Identities=30%  Similarity=0.916  Sum_probs=8.1

Q ss_pred             Cceecccccc
Q 031966           66 KLHECSICGQ   75 (150)
Q Consensus        66 kp~~C~~Cgk   75 (150)
                      .++.|+.||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            5788999985

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00614 ZnF_BED BED zinc finger

Probab=86.77  E-value=0.56  Score=25.11  Aligned_cols=25  Identities=28%  Similarity=0.732  Sum_probs=19.8

Q ss_pred             ceeccccccccccc-----hHHHHHhH-hcc
Q 031966           67 LHECSICGQEFAMG-----QALGGHMR-RHR   91 (150)
Q Consensus        67 p~~C~~Cgk~f~~~-----~~l~~H~~-~h~   91 (150)
                      --.|..|++.++..     ++|.+|++ .|.
T Consensus        18 ~a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       18 RAKCKYCGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             EEEecCCCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            35699999998765     69999998 564

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=86.40  E-value=0.49  Score=32.25  Aligned_cols=12  Identities=33%  Similarity=0.780  Sum_probs=10.1

Q ss_pred             CCCCceeccccc
Q 031966           63 TKPKLHECSICG   74 (150)
Q Consensus        63 ~~~kp~~C~~Cg   74 (150)
                      .|+-|-.|+.||
T Consensus       145 ~ge~P~~CPiCg  156 (166)
T COG1592         145 EGEAPEVCPICG  156 (166)
T ss_pred             cCCCCCcCCCCC
Confidence            457788999998

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=84.96  E-value=0.53  Score=30.87  Aligned_cols=29  Identities=34%  Similarity=0.631  Sum_probs=17.6

Q ss_pred             CCceeccccccccccchHHHHHhHhcccchhh
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHRIAMNE   96 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~   96 (150)
                      +.--.|-+||+.|..   |++|.+.|.|..+.
T Consensus        70 ~d~i~clecGk~~k~---LkrHL~~~~gltp~   98 (132)
T PF05443_consen   70 PDYIICLECGKKFKT---LKRHLRTHHGLTPE   98 (132)
T ss_dssp             SS-EE-TBT--EESB---HHHHHHHTT-S-HH
T ss_pred             cCeeEEccCCcccch---HHHHHHHccCCCHH
Confidence            345679999998765   48999999777543

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=84.78  E-value=0.84  Score=40.38  Aligned_cols=69  Identities=20%  Similarity=0.310  Sum_probs=46.5

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcc-cccccccCCCCceeccccccccccchHHHHHhHhc
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETK-TLSSTTATKPKLHECSICGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~-~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h   90 (150)
                      ..+|.|..|.-.|.....|..|++.-  .+.++.... ..+...+...++| |..|...|+....|..|+++-
T Consensus      1282 ~~~~~~~~~~~~~~~~~~l~~~~~k~--~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~~~alqihm~~~ 1351 (1406)
T KOG1146|consen 1282 THRYLCRQCKMAFDGEAPLTAHQRKF--CFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLSGREALQIHMRSS 1351 (1406)
T ss_pred             chhHHHHHHHhhhcchhHHHHHHHHH--HhccCccccCCCCcccCcccccc-chHHHhhcchhHHHHHHHHHh
Confidence            35688888888888888888887322  111111111 1233334555677 999999999999999999963

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=84.75  E-value=0.49  Score=35.51  Aligned_cols=27  Identities=22%  Similarity=0.480  Sum_probs=23.7

Q ss_pred             CCCCceeccc--cccccccchHHHHHhHh
Q 031966           63 TKPKLHECSI--CGQEFAMGQALGGHMRR   89 (150)
Q Consensus        63 ~~~kp~~C~~--Cgk~f~~~~~l~~H~~~   89 (150)
                      .++|||+|++  |.|.|.....|+-|+.-
T Consensus       345 ~d~KpykCpV~gC~K~YknqnGLKYH~lh  373 (423)
T COG5189         345 KDGKPYKCPVEGCNKKYKNQNGLKYHMLH  373 (423)
T ss_pred             ecCceecCCCCCchhhhccccchhhhhhc
Confidence            3469999987  99999999999999875

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=84.60  E-value=0.69  Score=29.95  Aligned_cols=21  Identities=19%  Similarity=0.287  Sum_probs=15.4

Q ss_pred             CCCceeccccccccccchHHH
Q 031966           64 KPKLHECSICGQEFAMGQALG   84 (150)
Q Consensus        64 ~~kp~~C~~Cgk~f~~~~~l~   84 (150)
                      +..|-.|+.||..|.-...++
T Consensus        23 nk~p~vcP~cg~~~~~~~~~~   43 (129)
T TIGR02300        23 NRRPAVSPYTGEQFPPEEALK   43 (129)
T ss_pred             CCCCccCCCcCCccCcchhhc
Confidence            446889999999986664444

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.33  E-value=0.98  Score=23.36  Aligned_cols=25  Identities=24%  Similarity=0.588  Sum_probs=16.4

Q ss_pred             CCCceeccccccccccc----hHHHHHhH
Q 031966           64 KPKLHECSICGQEFAMG----QALGGHMR   88 (150)
Q Consensus        64 ~~kp~~C~~Cgk~f~~~----~~l~~H~~   88 (150)
                      +..-..|..|++.+...    +.|.+|++
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL~   41 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHLK   41 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHHH
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhhh
Confidence            44567899999998764    78999984

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=83.07  E-value=0.83  Score=22.44  Aligned_cols=10  Identities=40%  Similarity=1.089  Sum_probs=7.7

Q ss_pred             Cceecccccc
Q 031966           66 KLHECSICGQ   75 (150)
Q Consensus        66 kp~~C~~Cgk   75 (150)
                      .|..|+.||.
T Consensus        17 ~p~~CP~Cg~   26 (34)
T cd00729          17 APEKCPICGA   26 (34)
T ss_pred             CCCcCcCCCC
Confidence            4678999985

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=82.99  E-value=1.1  Score=23.45  Aligned_cols=13  Identities=23%  Similarity=0.736  Sum_probs=10.2

Q ss_pred             ceecCCCCCcCCC
Q 031966           21 VFECKTCNRQFPS   33 (150)
Q Consensus        21 ~~~C~~C~k~f~~   33 (150)
                      .|.|..||..|..
T Consensus         2 ~Y~C~~Cg~~~~~   14 (44)
T smart00659        2 IYICGECGRENEI   14 (44)
T ss_pred             EEECCCCCCEeec
Confidence            4889999987753

present in RNA polymerase I, II and III

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=82.18  E-value=1  Score=23.59  Aligned_cols=13  Identities=23%  Similarity=0.797  Sum_probs=9.7

Q ss_pred             ceecCCCCCcCCC
Q 031966           21 VFECKTCNRQFPS   33 (150)
Q Consensus        21 ~~~C~~C~k~f~~   33 (150)
                      .|.|..||..|..
T Consensus         3 ~y~C~~CG~~~~~   15 (46)
T PRK00398          3 EYKCARCGREVEL   15 (46)
T ss_pred             EEECCCCCCEEEE
Confidence            5889999876643

>KOG4167 consensus Predicted DNA-binding protein, contains SANT and ELM2 domains [Transcription]

Probab=81.40  E-value=0.29  Score=40.51  Aligned_cols=27  Identities=30%  Similarity=0.618  Sum_probs=24.2

Q ss_pred             ceeccccccccccchHHHHHhHhcccc
Q 031966           67 LHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      -|.|.+|+|.|-.-.++..||++|.-.
T Consensus       792 iFpCreC~kvF~KiKSrNAHMK~Hr~q  818 (907)
T KOG4167|consen  792 IFPCRECGKVFFKIKSRNAHMKTHRQQ  818 (907)
T ss_pred             eeehHHHHHHHHHHhhhhHHHHHHHHH
Confidence            489999999999999999999999744

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=80.59  E-value=0.78  Score=25.21  Aligned_cols=29  Identities=17%  Similarity=0.361  Sum_probs=24.9

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHH
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRA   42 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~   42 (150)
                      ...-||.-++|+-||..|.......+|..
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhh
Confidence            34568888999999999999999999974

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=80.54  E-value=1.4  Score=21.91  Aligned_cols=34  Identities=21%  Similarity=0.567  Sum_probs=22.2

Q ss_pred             eecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccc
Q 031966           22 FECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFA   78 (150)
Q Consensus        22 ~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~   78 (150)
                      +.|+.|+..|.-......                       ....-..|+.||..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~~-----------------------~~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQLG-----------------------ANGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHcC-----------------------CCCCEEECCCCCCEEE
Confidence            679999988766544211                       1122578999998774

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	150
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	6e-11
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	5e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	5e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-04

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 53.2 bits (128), Expect = 6e-11
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 19 SDVFECKTCNRQFPSFQALGGHRASHKKPR 48
             + C  C R+F S QALGGH   H++ R
Sbjct: 4  PRSYTCSFCKREFRSAQALGGHMNVHRRDR 33

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 48.2 bits (115), Expect = 5e-09
 Identities = 15/27 (55%), Positives = 18/27 (66%)

Query: 65 PKLHECSICGQEFAMGQALGGHMRRHR 91
          P+ + CS C +EF   QALGGHM  HR
Sbjct: 4  PRSYTCSFCKREFRSAQALGGHMNVHR 30

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.9 bits (91), Expect = 4e-05
 Identities = 10/69 (14%), Positives = 18/69 (26%), Gaps = 15/69 (21%)

Query: 22 FECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQ 81
           +C+ C        +L  H+  H                         C  CG+ F    
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKH---------------AETVAALRFPCEFCGKRFEKPD 52

Query: 82 ALGGHMRRH 90
          ++  H  + 
Sbjct: 53 SVAAHRSKS 61

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 37.1 bits (85), Expect = 4e-04
 Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 15/95 (15%)

Query: 22  FECKTCNRQFPSFQALGGH---------------RASHKKPRLINGETKTLSSTTATKPK 66
           F CK C+  + +   L  H                 + K+       +           K
Sbjct: 20  FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79

Query: 67  LHECSICGQEFAMGQALGGHMRRHRIAMNESLNSA 101
           + +C  CG  F   Q L  HM + +     S  S+
Sbjct: 80  VLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 11/70 (15%), Positives = 20/70 (28%), Gaps = 16/70 (22%)

Query: 22 FECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQ 81
          + CK C+R +        H  +                    K   + C  C +EF    
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTS--------------HKRNVKV--YPCPFCFKEFTRKD 54

Query: 82 ALGGHMRRHR 91
           +  H++   
Sbjct: 55 NMTAHVKIIH 64

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 38.3 bits (88), Expect = 5e-04
 Identities = 11/61 (18%), Positives = 21/61 (34%)

Query: 46  KPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVS 105
              +     +     TA+    ++C +C         L  H+  H +  N +L S+ I  
Sbjct: 159 SAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTSSEIQR 218

Query: 106 Q 106
            
Sbjct: 219 H 219

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 36.1 bits (83), Expect = 7e-04
 Identities = 16/75 (21%), Positives = 22/75 (29%), Gaps = 21/75 (28%)

Query: 22 FECKTCNRQFPSFQALGGH-RASHKKPRLINGETKTLSSTTATKPKLH-----ECSICGQ 75
             K+C+R F +   L  H    H                   +   H     EC   G+
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEH---------------VGGPEQNNHVCYWEECPREGK 70

Query: 76 EFAMGQALGGHMRRH 90
           F     L  H+R H
Sbjct: 71 SFKAKYKLVNHIRVH 85

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 35.2 bits (82), Expect = 9e-04
 Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 16/69 (23%)

Query: 22 FECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQ 81
          +EC  C+ +F     +  H          + E                C  C    A   
Sbjct: 16 YECYICHARFTQSGTMKMHILQK------HTENV--------AK--FHCPHCDTVIARKS 59

Query: 82 ALGGHMRRH 90
           LG H+R+ 
Sbjct: 60 DLGVHLRKQ 68

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	150
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.87
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.84
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.82
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.81
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.8
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.79
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.79
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.79
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.79
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.78
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.78
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.77
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.76
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.76
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.75
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.75
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.73
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.73
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.72
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.72
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.72
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.71
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.71
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.71
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.71
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.71
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.71
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.69
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.69
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.69
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.68
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.65
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.62
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.62
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.62
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.62
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.58
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.58
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.57
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.56
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.55
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.55
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.54
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.54
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.54
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.53
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.53
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.53
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.53
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.52
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.52
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.52
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.52
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.52
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.52
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.52
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.52
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.52
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.52
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.51
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.51
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.51
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.51
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.51
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.51
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.51
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.51
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.51
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.51
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.5
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.5
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.5
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.5
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.5
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.5
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.49
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.49
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.49
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.49
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.49
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.48
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.47
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.47
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.46
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.45
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.45
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.45
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.44
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.44
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.44
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.44
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.44
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.44
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.44
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.43
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.43
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.43
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.43
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.42
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.42
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.42
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.42
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.4
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.39
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.38
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.37
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.37
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.35
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.35
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.34
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.33
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.32
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.31
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.31
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.29
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.28
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.28
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.25
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.23
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.23
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.23
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.23
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.22
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.22
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.22
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.21
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.21
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.21
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.21
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.2
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.2
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.2
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.2
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.2
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.2
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.19
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.19
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.18
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.18
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.18
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.15
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.15
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.14
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.14
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.13
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.11
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.1
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.1
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.1
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.1
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.08
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.07
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.06
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.04
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	99.04
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.03
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.02
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.0
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.0
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.99
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.98
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.96
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.95
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.95
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.91
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.9
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.89
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.89
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.89
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.88
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.87
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.87
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.86
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.85
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.85
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.83
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.82
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.82
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.81
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.79
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.78
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.77
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.77
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.76
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.76
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.74
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.74
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.74
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.74
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.74
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.73
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.73
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.71
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.71
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.7
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.7
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.14
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.68
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.68
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.13
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.67
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.67
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.66
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.66
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.66
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.64
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.63
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.63
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.62
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.62
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.62
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.61
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.59
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.59
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	98.0
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.99
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.98
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.55
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.53
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.45
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.79
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.29
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.75
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.67
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.59
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.54
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.86
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.15
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.89
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.7
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.17
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	93.26
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.56
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	90.93
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	89.74
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	88.37
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	88.29
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	85.58
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.02
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	84.37
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	83.82
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	83.25
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	82.77
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	80.63

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=1.4e-23  Score=137.34  Aligned_cols=90  Identities=14%  Similarity=0.173  Sum_probs=81.6

Q ss_pred             cccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCCCceeccccccc
Q 031966            7 NRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKPKLHECSICGQE   76 (150)
Q Consensus         7 ~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~kp~~C~~Cgk~   76 (150)
                      .++..|.++|.|+++|.|.+||+.|.....|..|+++|+++++|.|....          .|+++|++++||.|.+||+.
T Consensus         8 ~h~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~   87 (133)
T 2lt7_A            8 KHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKS   87 (133)
T ss_dssp             CCSSEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred             HHHhhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCC
Confidence            45566778999999999999999999999999999999999999987721          78999999999999999999


Q ss_pred             cccchHHHHHhHhcccchhh
Q 031966           77 FAMGQALGGHMRRHRIAMNE   96 (150)
Q Consensus        77 f~~~~~l~~H~~~h~~~~~~   96 (150)
                      |...+.|..|+++|+++.+.
T Consensus        88 F~~~~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           88 FINYQFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             ESSHHHHHHHHHHHTCCCTT
T ss_pred             cCCHHHHHHHhHHhcCCCCC
Confidence            99999999999999887654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.87  E-value=1.1e-22  Score=115.31  Aligned_cols=59  Identities=22%  Similarity=0.495  Sum_probs=55.8

Q ss_pred             CCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccch
Q 031966           18 ASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        18 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      .||||.|.+||+.|...+.|..|+++|                  +|++||.|.+||++|...+.|..|+++|+|++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~H------------------t~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAH------------------LGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHH------------------HTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHh------------------CCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            389999999999999999999999999                  78899999999999999999999999999986

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.84  E-value=7.9e-21  Score=120.74  Aligned_cols=91  Identities=20%  Similarity=0.291  Sum_probs=79.9

Q ss_pred             cccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHh--cCCCCCCC-CCc----c--c------ccccccCCCCcee
Q 031966            5 RSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRAS--HKKPRLIN-GET----K--T------LSSTTATKPKLHE   69 (150)
Q Consensus         5 ~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~--h~~~k~~~-c~~----~--~------~h~~~h~~~kp~~   69 (150)
                      ....|+.|+++|+++++|.|.+|++.|.....|..|+++  |.+++++. |..    +  .      .|+++|.+++||.
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            456799999999999999999999999999999999999  77777653 533    2  2      7889999999999


Q ss_pred             ccccccccccchHHHHHhHhcccchh
Q 031966           70 CSICGQEFAMGQALGGHMRRHRIAMN   95 (150)
Q Consensus        70 C~~Cgk~f~~~~~l~~H~~~h~~~~~   95 (150)
                      |.+||+.|.....|..|+++|.....
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCccc
Confidence            99999999999999999999876643

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.82  E-value=2.1e-21  Score=133.54  Aligned_cols=108  Identities=16%  Similarity=0.228  Sum_probs=84.8

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCCCceecc
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKPKLHECS   71 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~kp~~C~   71 (150)
                      .|.....|..|+++|.++++|.|..|++.|.....|..|++.|.++++|.|....          .|+++|.+++||.|.
T Consensus        58 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  137 (190)
T 2i13_A           58 SFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP  137 (190)
T ss_dssp             EESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECT
T ss_pred             hhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECC
Confidence            4667777888888888888888888888888888888888888888888776611          677778888888888


Q ss_pred             ccccccccchHHHHHhHhcccchhhcccccccccCCCC
Q 031966           72 ICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPP  109 (150)
Q Consensus        72 ~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  109 (150)
                      .||+.|.....|..|+++|+++++..+..+........
T Consensus       138 ~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~  175 (190)
T 2i13_A          138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRD  175 (190)
T ss_dssp             TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHH
T ss_pred             CCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHH
Confidence            88888888888888888888888777777766555443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.81  E-value=6.3e-21  Score=122.58  Aligned_cols=94  Identities=18%  Similarity=0.305  Sum_probs=81.6

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCc--cc----------ccccccCCCCcee
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGET--KT----------LSSTTATKPKLHE   69 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~--~~----------~h~~~h~~~kp~~   69 (150)
                      .|.....|..|+++| ++++|.|..|++.|.....|..|+++|.++++|.|..  ..          .|+++|.++++|.
T Consensus        16 ~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   94 (124)
T 1ubd_C           16 MFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV   94 (124)
T ss_dssp             EESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCC
T ss_pred             ccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceE
Confidence            577888999999999 8999999999999999999999999999999998852  11          7889999999999


Q ss_pred             cc--ccccccccchHHHHHhHhcccchhh
Q 031966           70 CS--ICGQEFAMGQALGGHMRRHRIAMNE   96 (150)
Q Consensus        70 C~--~Cgk~f~~~~~l~~H~~~h~~~~~~   96 (150)
                      |.  .||+.|.....|..|+++|+++++.
T Consensus        95 C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           95 CPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             CCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            95  5999999999999999999988753

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.80  E-value=1.1e-20  Score=129.88  Aligned_cols=108  Identities=18%  Similarity=0.247  Sum_probs=79.1

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCCCceecc
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKPKLHECS   71 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~kp~~C~   71 (150)
                      .|.....|..|+++|.++++|.|..|++.|.....|..|++.|.++++|.|....          .|+++|.++++|.|.
T Consensus        30 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  109 (190)
T 2i13_A           30 SFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACP  109 (190)
T ss_dssp             -CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECT
T ss_pred             ccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCC
Confidence            4666777888888888888888888888888888888888888888887776511          677777788888888


Q ss_pred             ccccccccchHHHHHhHhcccchhhcccccccccCCCC
Q 031966           72 ICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPP  109 (150)
Q Consensus        72 ~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  109 (150)
                      .|++.|.....|..|+++|+++++..+..+........
T Consensus       110 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  147 (190)
T 2i13_A          110 ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSRED  147 (190)
T ss_dssp             TTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHH
Confidence            88888888888888888888877777776665555443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=3e-20  Score=115.24  Aligned_cols=77  Identities=17%  Similarity=0.181  Sum_probs=70.2

Q ss_pred             cccccccchhhhhcCCCCceecCCCCCcCC-CHHHHHhhHHhcCCCCCCCCCcccccccccCC-CCceeccccccccccc
Q 031966            3 LTRSNRAKLPIKKRLASDVFECKTCNRQFP-SFQALGGHRASHKKPRLINGETKTLSSTTATK-PKLHECSICGQEFAMG   80 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~-~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~-~kp~~C~~Cgk~f~~~   80 (150)
                      +.....+..|+++|+++++|.|.+|++.|. ....|..|+++|                  .+ ++||.|.+|++.|...
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h------------------~~~~~~~~C~~C~k~F~~~   67 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVC------------------QKLQDALKCQHCRKQFKSK   67 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHH------------------HHHHHHHSCSSSCCCCSCH
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHH------------------cCCCCCEECCCCCCccCCH
Confidence            345667899999999999999999999999 999999999998                  56 7899999999999999


Q ss_pred             hHHHHHhHhcccchhhc
Q 031966           81 QALGGHMRRHRIAMNES   97 (150)
Q Consensus        81 ~~l~~H~~~h~~~~~~~   97 (150)
                      ..|..|+++|+++++..
T Consensus        68 ~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           68 AGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             HHHHHHHHHHSCSCSSC
T ss_pred             HHHHHHHHHHcCCCCCC
Confidence            99999999999987644

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=6.2e-20  Score=117.65  Aligned_cols=92  Identities=22%  Similarity=0.318  Sum_probs=81.3

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHh---cCCCCCCCCCccc----------ccccccCCCCce
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRAS---HKKPRLINGETKT----------LSSTTATKPKLH   68 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~---h~~~k~~~c~~~~----------~h~~~h~~~kp~   68 (150)
                      .|.....|..|+++|.++++|.|..|++.|.....|..|++.   |.++++|.|....          .|+++|.+++||
T Consensus        16 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   95 (124)
T 2dlq_A           16 KFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPY   95 (124)
T ss_dssp             CCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSE
T ss_pred             cCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCc
Confidence            577888999999999999999999999999999999999985   5788889887621          788899999999


Q ss_pred             eccccccccccchHHHHHhH-hcccc
Q 031966           69 ECSICGQEFAMGQALGGHMR-RHRIA   93 (150)
Q Consensus        69 ~C~~Cgk~f~~~~~l~~H~~-~h~~~   93 (150)
                      .|..|++.|.....|..|++ .|.++
T Consensus        96 ~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           96 KCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             cCCCccchhCCHHHHHHHHHHHCCCC
Confidence            99999999999999999997 57664

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.79  E-value=2.1e-20  Score=119.18  Aligned_cols=89  Identities=21%  Similarity=0.385  Sum_probs=72.6

Q ss_pred             ccccccccchhhhhcCCCCceecC--CCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCCCcee
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECK--TCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKPKLHE   69 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~kp~~   69 (150)
                      .|.....|..|+++|.++++|.|.  .|++.|.....|..|+++|.++++|.|....          .|+++|.++++|.
T Consensus        17 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   96 (119)
T 2jp9_A           17 RYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFS   96 (119)
T ss_dssp             CBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEE
T ss_pred             hhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCee
Confidence            467777888888888888888888  6888888888888888888888888776611          6777888888888


Q ss_pred             c--cccccccccchHHHHHhHhc
Q 031966           70 C--SICGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        70 C--~~Cgk~f~~~~~l~~H~~~h   90 (150)
                      |  +.||+.|.....|..|+++|
T Consensus        97 C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           97 CRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCCCCccccCCHHHHHHHHhcC
Confidence            8  67888888888888888776

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.79  E-value=4.7e-20  Score=122.84  Aligned_cols=97  Identities=16%  Similarity=0.200  Sum_probs=86.3

Q ss_pred             ccccccccchhhhh-cCCCCc--------eecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCc--cc----------cccc
Q 031966            2 LLTRSNRAKLPIKK-RLASDV--------FECKTCNRQFPSFQALGGHRASHKKPRLINGET--KT----------LSST   60 (150)
Q Consensus         2 ~f~~~~~l~~h~~~-h~~~~~--------~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~--~~----------~h~~   60 (150)
                      .|.....|..|+++ |.++.+        |.|..|++.|.....|..|+++|.++++|.|..  ..          .|++
T Consensus        34 ~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  113 (155)
T 2rpc_A           34 TFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKR  113 (155)
T ss_dssp             CBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHT
T ss_pred             ccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHH
Confidence            57888899999997 887765        899999999999999999999999999998863  21          7889


Q ss_pred             ccCCCCceeccc--cccccccchHHHHHhHhcccchhhcc
Q 031966           61 TATKPKLHECSI--CGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        61 ~h~~~kp~~C~~--Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      +|.+++||.|..  |++.|.....|..|+++|+++++..+
T Consensus       114 ~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A          114 THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             TTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             hhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            999999999997  99999999999999999999887654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.78  E-value=7.9e-20  Score=111.05  Aligned_cols=74  Identities=27%  Similarity=0.491  Sum_probs=55.9

Q ss_pred             cccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchH
Q 031966            3 LTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQA   82 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~   82 (150)
                      |.....|..|+++|.++++|.|..|++.|.....|..|+++|                  .+++||.|..|++.|.....
T Consensus        16 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~C~~~f~~~~~   77 (90)
T 1a1h_A           16 FSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH------------------TGEKPFACDICGRKFARSDE   77 (90)
T ss_dssp             ESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH------------------HCCCCEECTTTCCEESSHHH
T ss_pred             cCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHc------------------CCCCCccCCCCCchhCCHHH
Confidence            455556666666666666666666666666666666666665                  78899999999999999999


Q ss_pred             HHHHhHhcccch
Q 031966           83 LGGHMRRHRIAM   94 (150)
Q Consensus        83 l~~H~~~h~~~~   94 (150)
                      |..|+++|++++
T Consensus        78 l~~H~~~H~~~k   89 (90)
T 1a1h_A           78 RKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHGGGGC--
T ss_pred             HHHHHHHhcccC
Confidence            999999999875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.78  E-value=1.9e-19  Score=112.62  Aligned_cols=82  Identities=23%  Similarity=0.342  Sum_probs=71.5

Q ss_pred             cCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCCCceeccccccccccchHHHH
Q 031966           16 RLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKPKLHECSICGQEFAMGQALGG   85 (150)
Q Consensus        16 h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~   85 (150)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|....          .|+++|.++++|.|.+|++.|.....|..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            45678899999999999999999999999888888887621          78888899999999999999999999999


Q ss_pred             HhHhcccchhhc
Q 031966           86 HMRRHRIAMNES   97 (150)
Q Consensus        86 H~~~h~~~~~~~   97 (150)
                      |+++|.++++..
T Consensus        92 H~~~H~~~~~~~  103 (106)
T 2ee8_A           92 HKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHTTSCCCCC
T ss_pred             HHHHhCCCCCCc
Confidence            999999987653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=2.9e-19  Score=112.58  Aligned_cols=81  Identities=17%  Similarity=0.276  Sum_probs=72.0

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCCCceeccccccccccchHHH
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKPKLHECSICGQEFAMGQALG   84 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~kp~~C~~Cgk~f~~~~~l~   84 (150)
                      .|+++++|.| .|++.|.....|..|++.|.++++|.|....          .|+++|.++++|.|.+|++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            5789999999 8999999999999999999999999887621          7888999999999999999999999999


Q ss_pred             HHhHhcccchhh
Q 031966           85 GHMRRHRIAMNE   96 (150)
Q Consensus        85 ~H~~~h~~~~~~   96 (150)
                      .|+++|......
T Consensus        83 ~H~~~~~~~~~~   94 (110)
T 2csh_A           83 RHVTSCTKSYEA   94 (110)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHccccccc
Confidence            999998866433

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=4.6e-19  Score=106.74  Aligned_cols=81  Identities=17%  Similarity=0.297  Sum_probs=69.9

Q ss_pred             ccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHh
Q 031966            8 RAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHM   87 (150)
Q Consensus         8 ~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~   87 (150)
                      +|..|+++|+++++|.|.+|++.|.....|..|++.|.+..              ..+++|.|..|++.|.....|..|+
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~--------------~~~~~~~C~~C~~~f~~~~~L~~H~   67 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN--------------FVPAAFVCSKCGKTFTRRNTMARHA   67 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS--------------CCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc--------------CCCcceECCCCCChhCCHHHHHHHH
Confidence            57899999999999999999999999999999998773221              1237999999999999999999999


Q ss_pred             Hhcccchhhcccccc
Q 031966           88 RRHRIAMNESLNSAV  102 (150)
Q Consensus        88 ~~h~~~~~~~~~~~~  102 (150)
                      ++|+++.+..+..+.
T Consensus        68 ~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A           68 DNCAGPDGVEGENSG   82 (86)
T ss_dssp             HHCCCCCSCCCCCCC
T ss_pred             HHccCCCCcccCCCC
Confidence            999999877665543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=1.9e-19  Score=119.73  Aligned_cols=105  Identities=15%  Similarity=0.084  Sum_probs=77.5

Q ss_pred             ccccccccchhhh---hcCCCCceecCC-----CCCcCCCHHHHHhhHHhcCCCCCCCCCc--c----c------ccccc
Q 031966            2 LLTRSNRAKLPIK---KRLASDVFECKT-----CNRQFPSFQALGGHRASHKKPRLINGET--K----T------LSSTT   61 (150)
Q Consensus         2 ~f~~~~~l~~h~~---~h~~~~~~~C~~-----C~k~f~~~~~L~~H~~~h~~~k~~~c~~--~----~------~h~~~   61 (150)
                      .|.....|..|++   +|.++++|.|..     |++.|.....|..|++.|.++++|.|..  .    .      .|+++
T Consensus        12 ~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   91 (155)
T 2gli_A           12 EFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS   91 (155)
T ss_dssp             BCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHH
Confidence            4677777888877   677788887764     3478888888888888888888887752  1    1      67777


Q ss_pred             cCCCCceeccc--cccccccchHHHHHh-Hhcccchhhcccc--cccccC
Q 031966           62 ATKPKLHECSI--CGQEFAMGQALGGHM-RRHRIAMNESLNS--AVIVSQ  106 (150)
Q Consensus        62 h~~~kp~~C~~--Cgk~f~~~~~l~~H~-~~h~~~~~~~~~~--~~~~~~  106 (150)
                      |.+++||.|..  |++.|.....|..|+ ++|.++++..+..  +.....
T Consensus        92 h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~  141 (155)
T 2gli_A           92 HTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYT  141 (155)
T ss_dssp             TTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEES
T ss_pred             cCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccC
Confidence            88888888887  888888888888887 6788877777665  554443

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=3.2e-19  Score=109.65  Aligned_cols=81  Identities=19%  Similarity=0.264  Sum_probs=66.7

Q ss_pred             cCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCCCceeccccccccccchHHHH
Q 031966           16 RLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKPKLHECSICGQEFAMGQALGG   85 (150)
Q Consensus        16 h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~   85 (150)
                      +.++++|.|.+|++.|.....|..|++.|.++++|.|....          .|+++|.++++|.|.+|++.|.....|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            45677888888888888888888888888877777776511          67777899999999999999999999999


Q ss_pred             HhHhcccchhh
Q 031966           86 HMRRHRIAMNE   96 (150)
Q Consensus        86 H~~~h~~~~~~   96 (150)
                      |+++|+++...
T Consensus        83 H~~~h~~~~~p   93 (96)
T 2dmd_A           83 HLRSHTGDSGP   93 (96)
T ss_dssp             HHTTCCSCCCC
T ss_pred             HHHHhcCCCCC
Confidence            99999987643

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=3e-19  Score=112.10  Aligned_cols=86  Identities=15%  Similarity=0.185  Sum_probs=75.5

Q ss_pred             chhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCCCceecccccccccc
Q 031966           10 KLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKPKLHECSICGQEFAM   79 (150)
Q Consensus        10 ~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~kp~~C~~Cgk~f~~   79 (150)
                      ..++++|+++++|.|.+|++.|.....|..|+++|  +++|.|....          .|++ |.+++||.|.+|++.|..
T Consensus         5 ss~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~   81 (107)
T 1wjp_A            5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKS   81 (107)
T ss_dssp             CCCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSS
T ss_pred             cccCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCC
Confidence            45678899999999999999999999999999999  4688887621          6775 999999999999999999


Q ss_pred             chHHHHHhH-hcccchhhcc
Q 031966           80 GQALGGHMR-RHRIAMNESL   98 (150)
Q Consensus        80 ~~~l~~H~~-~h~~~~~~~~   98 (150)
                      ...|..|++ +|.++++...
T Consensus        82 ~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           82 SFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHHHHHcCCCCCCCC
Confidence            999999997 8988876654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.76  E-value=2.2e-19  Score=107.15  Aligned_cols=73  Identities=25%  Similarity=0.483  Sum_probs=65.0

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccch
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQ   81 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~   81 (150)
                      .|.....|..|+++|.++++|.|..|++.|.....|..|+++|                  .++++|.|..||+.|....
T Consensus        10 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~C~~~f~~~~   71 (82)
T 2kmk_A           10 SFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH------------------TGEKPHKCQVCGKAFSQSS   71 (82)
T ss_dssp             EESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHH------------------HTCCCEECTTTSCEESSHH
T ss_pred             cccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHh------------------cCCCCCcCCCcchhhCChH
Confidence            4677788889999998889999999999999999999998888                  7788999999999999999


Q ss_pred             HHHHHhHhccc
Q 031966           82 ALGGHMRRHRI   92 (150)
Q Consensus        82 ~l~~H~~~h~~   92 (150)
                      .|..|+++|+|
T Consensus        72 ~l~~H~~~H~g   82 (82)
T 2kmk_A           72 NLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHHC-
T ss_pred             HHHHHHHhhCC
Confidence            99999999975

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=5.7e-19  Score=103.28  Aligned_cols=67  Identities=24%  Similarity=0.390  Sum_probs=61.9

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhc
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h   90 (150)
                      .+.++|+++++|.|.+|++.|.....|..|+++|                  .+++||.|.+|++.|.....|.+|+++|
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h------------------~~~~~~~C~~C~~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH------------------TGEKPYKCLECGKAFSQNSGLINHQRIH   65 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHGG------------------GCSCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHhc------------------CCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            3567899999999999999999999999999998                  6788999999999999999999999999


Q ss_pred             ccchh
Q 031966           91 RIAMN   95 (150)
Q Consensus        91 ~~~~~   95 (150)
                      +++..
T Consensus        66 ~~~~~   70 (72)
T 1x6e_A           66 TSGPS   70 (72)
T ss_dssp             HSSSS
T ss_pred             CCCCC
Confidence            88753

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1e-18  Score=103.39  Aligned_cols=68  Identities=21%  Similarity=0.379  Sum_probs=61.6

Q ss_pred             ccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHH-hcCCCCCCCCCcccccccccCC-CCceeccccccccccchHHHH
Q 031966            8 RAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRA-SHKKPRLINGETKTLSSTTATK-PKLHECSICGQEFAMGQALGG   85 (150)
Q Consensus         8 ~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~k~~~c~~~~~h~~~h~~-~kp~~C~~Cgk~f~~~~~l~~   85 (150)
                      +|..|+++|++++||.|.+|++.|.....|..|++ .|                  .+ +++|.|.+|++.|.....|..
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h------------------~~~~~~~~C~~C~~~f~~~~~L~~   63 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKH------------------TENVAKFHCPHCDTVIARKSDLGV   63 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHS------------------SSSCSSEECSSSSCEESSHHHHHH
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhc------------------CCCCCccCCCCCCCccCCHHHHHH
Confidence            57889999999999999999999999999999997 56                  44 489999999999999999999


Q ss_pred             HhHhcccc
Q 031966           86 HMRRHRIA   93 (150)
Q Consensus        86 H~~~h~~~   93 (150)
                      |+++|++.
T Consensus        64 H~~~~H~~   71 (77)
T 2ct1_A           64 HLRKQHSY   71 (77)
T ss_dssp             HHHHTSCC
T ss_pred             HHHHhCCC
Confidence            99986554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.75  E-value=8e-19  Score=120.55  Aligned_cols=111  Identities=17%  Similarity=0.239  Sum_probs=92.3

Q ss_pred             ccccccccchhhhhcCCCCceec--CCCCCcCCCHHHHHhhHHhcCCCCCCCCC--ccc----------ccc-ccc-CCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFEC--KTCNRQFPSFQALGGHRASHKKPRLINGE--TKT----------LSS-TTA-TKP   65 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C--~~C~k~f~~~~~L~~H~~~h~~~k~~~c~--~~~----------~h~-~~h-~~~   65 (150)
                      .|.....|..|+++|.++++|.|  ..|++.|.....|..|+++|.++++|.|.  ...          .|+ +.| .++
T Consensus        23 ~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~  102 (190)
T 1tf6_A           23 AYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKI  102 (190)
T ss_dssp             BCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTT
T ss_pred             hhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCc
Confidence            47778889999999999999999  88999999999999999999999999887  411          666 667 578


Q ss_pred             Cceec--cccccccccchHHHHHhHhcccchhhcccc--cccccCCCCccc
Q 031966           66 KLHEC--SICGQEFAMGQALGGHMRRHRIAMNESLNS--AVIVSQSPPVLR  112 (150)
Q Consensus        66 kp~~C--~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~--~~~~~~~~~~~~  112 (150)
                      ++|.|  ..||+.|.....|..|+++|+++++..+..  +.........+.
T Consensus       103 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~  153 (190)
T 1tf6_A          103 CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLK  153 (190)
T ss_dssp             SCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHH
T ss_pred             ceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHH
Confidence            89999  889999999999999999999998888866  776666554443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=3.3e-18  Score=99.44  Aligned_cols=65  Identities=20%  Similarity=0.331  Sum_probs=60.1

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccch
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      .|+++++|.|.+|++.|.....|..|+++|                  .++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H------------------~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIH------------------CTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGG------------------CCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHc------------------CCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999998                  77889999999999999999999999999886


Q ss_pred             hhc
Q 031966           95 NES   97 (150)
Q Consensus        95 ~~~   97 (150)
                      +..
T Consensus        65 p~p   67 (70)
T 1x5w_A           65 SGP   67 (70)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.73  E-value=4.6e-18  Score=99.84  Aligned_cols=64  Identities=27%  Similarity=0.488  Sum_probs=59.2

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccc
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      ..+.++++|.|..|++.|.....|..|+++|                  .+++||.|..|++.|.....|.+|+++|+++
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H------------------~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVH------------------TGEKPYRCNICGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHH------------------CCCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHc------------------CCCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence            4567899999999999999999999999999                  7788999999999999999999999999988


Q ss_pred             hh
Q 031966           94 MN   95 (150)
Q Consensus        94 ~~   95 (150)
                      ++
T Consensus        72 kp   73 (74)
T 2lce_A           72 KP   73 (74)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.72  E-value=2.8e-18  Score=117.85  Aligned_cols=91  Identities=19%  Similarity=0.241  Sum_probs=83.0

Q ss_pred             ccccccccchhhhhcCCCCceecC--CCCCcCCCHHHHHhhH-Hhc-CCCCCCCC--Cccc----------ccccccCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECK--TCNRQFPSFQALGGHR-ASH-KKPRLING--ETKT----------LSSTTATKP   65 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~-~~h-~~~k~~~c--~~~~----------~h~~~h~~~   65 (150)
                      .|.....|..|+++|.++++|.|.  .|++.|.....|..|+ +.| .++++|.|  ....          .|+++|.++
T Consensus        53 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~  132 (190)
T 1tf6_A           53 GFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ  132 (190)
T ss_dssp             CCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSS
T ss_pred             hhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCC
Confidence            578888999999999999999999  8999999999999999 778 57888988  5511          789999999


Q ss_pred             Cceeccc--cccccccchHHHHHhHhccc
Q 031966           66 KLHECSI--CGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        66 kp~~C~~--Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      +||.|..  ||+.|.....|..|+++|++
T Consensus       133 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          133 LPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             CSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             CCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            9999988  99999999999999999998

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=5.6e-18  Score=103.82  Aligned_cols=74  Identities=20%  Similarity=0.364  Sum_probs=49.5

Q ss_pred             cccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCC--Cceeccccccccccc
Q 031966            3 LTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKP--KLHECSICGQEFAMG   80 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~--kp~~C~~Cgk~f~~~   80 (150)
                      |.....|..|+++|.++++|.|.+|++.|.....|..|++.|                  .++  ++|.|.+|++.|...
T Consensus        17 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~~~C~~C~~~f~~~   78 (95)
T 2yt9_A           17 FRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH------------------DGSVGKPYICQSCGKGFSRP   78 (95)
T ss_dssp             ESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHH------------------CCCCCSSBCCSSSCCCBSSH
T ss_pred             cCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHh------------------cCCCCCceECCCccchhCCH
Confidence            444444555555555555555555555555555555555544                  665  899999999999999


Q ss_pred             hHHHHHhH-hcccch
Q 031966           81 QALGGHMR-RHRIAM   94 (150)
Q Consensus        81 ~~l~~H~~-~h~~~~   94 (150)
                      ..|..|++ +|.++.
T Consensus        79 ~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           79 DHLNGHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHHHHHTSCCCS
T ss_pred             HHHHHHHHHhcCCCC
Confidence            99999996 787653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=8.5e-18  Score=99.42  Aligned_cols=70  Identities=27%  Similarity=0.451  Sum_probs=62.9

Q ss_pred             chhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHh
Q 031966           10 KLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        10 ~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      ..+...+.++++|.|.+|++.|.....|..|+++|                  .+++||.|.+|++.|.....|..|+++
T Consensus         7 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~C~~~f~~~~~L~~H~~~   68 (77)
T 2cot_A            7 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH------------------TGEKPYKCDECGKAFIQRSHLIGHHRV   68 (77)
T ss_dssp             CCCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTT------------------CCSCSEECSSSCCEESSHHHHHHHGGG
T ss_pred             CCCcCcCCCCCCEECCCCCcccCCHHHHHHHHHHc------------------CCCcCeeCCCCCCccCCHHHHHHHHHH
Confidence            34455678899999999999999999999999988                  678899999999999999999999999


Q ss_pred             cccchhhc
Q 031966           90 HRIAMNES   97 (150)
Q Consensus        90 h~~~~~~~   97 (150)
                      |+++++..
T Consensus        69 H~~~~p~~   76 (77)
T 2cot_A           69 HTGSGPSS   76 (77)
T ss_dssp             SCCCCCCC
T ss_pred             hCCCCCCC
Confidence            99987653

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=4.1e-18  Score=105.28  Aligned_cols=73  Identities=16%  Similarity=0.278  Sum_probs=65.3

Q ss_pred             cccccccchhhhhcCCCCceecCCCCCcC-CCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccch
Q 031966            3 LTRSNRAKLPIKKRLASDVFECKTCNRQF-PSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQ   81 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~~~~~~C~~C~k~f-~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~   81 (150)
                      |.....|..|++.|.++++|.|.+|++.| ....+|..|+++| +                  ++||.|.+||+.|....
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~------------------~k~~~C~~Cgk~F~~~~   76 (96)
T 2ctd_A           16 YAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-K------------------QEMFTCHHCGKQLRSLA   76 (96)
T ss_dssp             SCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-C------------------CCCCCCSSSCCCCSSHH
T ss_pred             CCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-C------------------CCCeECCCCCCeeCCHH
Confidence            45566788999999999999999999999 9999999999987 4                  46788999999999999


Q ss_pred             HHHHH-hHhcccch
Q 031966           82 ALGGH-MRRHRIAM   94 (150)
Q Consensus        82 ~l~~H-~~~h~~~~   94 (150)
                      .|..| +++|+++.
T Consensus        77 ~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           77 GMKYHVMANHNSLP   90 (96)
T ss_dssp             HHHHHHHHHTCCCS
T ss_pred             HHHHHhHHhcCCCC
Confidence            99999 89998654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=4.9e-18  Score=112.82  Aligned_cols=91  Identities=14%  Similarity=0.284  Sum_probs=82.5

Q ss_pred             ccccccccchhhhhcCCCCceecCC--CCCcCCCHHHHHhhHHhcCCCCCCCCCc--cc----------ccc-cccCCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKT--CNRQFPSFQALGGHRASHKKPRLINGET--KT----------LSS-TTATKPK   66 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~k~~~c~~--~~----------~h~-~~h~~~k   66 (150)
                      .|.....|..|+++|.++++|.|..  |++.|.....|..|+++|.++++|.|..  ..          .|+ ++|.+++
T Consensus        48 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~  127 (155)
T 2gli_A           48 PFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK  127 (155)
T ss_dssp             CCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCC
T ss_pred             hhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            4777888999999999999999985  9999999999999999999999998874  21          787 8999999


Q ss_pred             ceeccc--cccccccchHHHHHhHhccc
Q 031966           67 LHECSI--CGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        67 p~~C~~--Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      ||.|..  |++.|.....|..|+++|+|
T Consensus       128 ~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          128 PYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            999988  99999999999999999875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.71  E-value=6.2e-18  Score=104.49  Aligned_cols=74  Identities=20%  Similarity=0.405  Sum_probs=53.3

Q ss_pred             CCceecCC--CCCcCCCHHHHHhhHHhcCCCCCCCCC--cc----c------ccccccCCCCceeccccccccccchHHH
Q 031966           19 SDVFECKT--CNRQFPSFQALGGHRASHKKPRLINGE--TK----T------LSSTTATKPKLHECSICGQEFAMGQALG   84 (150)
Q Consensus        19 ~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~k~~~c~--~~----~------~h~~~h~~~kp~~C~~Cgk~f~~~~~l~   84 (150)
                      +++|.|..  |++.|.....|..|+++|.++++|.|.  ..    .      .|+++|.+++||.|.+|++.|.....|.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            34566664  666666666666666666666666553  11    0      4555668999999999999999999999


Q ss_pred             HHhHhccc
Q 031966           85 GHMRRHRI   92 (150)
Q Consensus        85 ~H~~~h~~   92 (150)
                      .|+++|++
T Consensus        93 ~H~~~H~~  100 (100)
T 2ebt_A           93 LHMKRHQN  100 (100)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            99999974

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.71  E-value=9.3e-18  Score=101.30  Aligned_cols=64  Identities=19%  Similarity=0.345  Sum_probs=57.8

Q ss_pred             hhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHh-Hhcc
Q 031966           13 IKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHM-RRHR   91 (150)
Q Consensus        13 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~-~~h~   91 (150)
                      +..+.+.++|.|++||+.|.....|.+|+++|                  ++++||.|.+|++.|.....|.+|+ ++|+
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H------------------~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLL------------------HAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTT------------------SCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhc------------------cCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            45677789999999999999999999999999                  7889999999999999999999997 5788


Q ss_pred             cch
Q 031966           92 IAM   94 (150)
Q Consensus        92 ~~~   94 (150)
                      +|.
T Consensus        82 ~E~   84 (85)
T 2lv2_A           82 SEN   84 (85)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            763

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.8e-17  Score=103.38  Aligned_cols=74  Identities=22%  Similarity=0.265  Sum_probs=64.5

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHH-hcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHH-hHhcc
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRA-SHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGH-MRRHR   91 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H-~~~h~   91 (150)
                      ..-+|++||.|..|++.|...+.|..|++ .|++.               .+++||.|.+||+.|...+.|..| +++|+
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~---------------~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Ht   75 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV---------------VLNSSYVCVECNFLTKRYDALSEHNLKYHP   75 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC---------------CCSCCEEETTTTEEESSTHHHHTHHHHTST
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC---------------CCCCCcCCCCCCcccCCHHHHHHHHHHhcC
Confidence            34579999999999999999999999997 48432               357899999999999999999999 89999


Q ss_pred             cchhhcccccc
Q 031966           92 IAMNESLNSAV  102 (150)
Q Consensus        92 ~~~~~~~~~~~  102 (150)
                      ++++..+....
T Consensus        76 gekpy~C~~~~   86 (102)
T 2ghf_A           76 GEENFKLTMVK   86 (102)
T ss_dssp             TCCCEEEEECC
T ss_pred             CCCCeeCCccc
Confidence            99998887643

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=7.4e-18  Score=99.88  Aligned_cols=68  Identities=18%  Similarity=0.369  Sum_probs=58.2

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhH-hcccc
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMR-RHRIA   93 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~-~h~~~   93 (150)
                      +|+++++|.|.+|++.|.....|..|+++|.++               .++++|.|.+|++.|.....|..|++ .|.++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~---------------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAET---------------VAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHH---------------TTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc---------------CCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            488999999999999999999999999999321               13789999999999999999999995 57666


Q ss_pred             hhhc
Q 031966           94 MNES   97 (150)
Q Consensus        94 ~~~~   97 (150)
                      .+..
T Consensus        66 ~~~~   69 (78)
T 2d9h_A           66 LLAP   69 (78)
T ss_dssp             SSCC
T ss_pred             CCCc
Confidence            5443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.70  E-value=6.9e-18  Score=107.34  Aligned_cols=91  Identities=20%  Similarity=0.266  Sum_probs=79.9

Q ss_pred             CCCCceecCC--CCCcCCCHHHHHhhHHhcCCCCCCCCC--cc----c------ccccccCCCCceeccccccccccchH
Q 031966           17 LASDVFECKT--CNRQFPSFQALGGHRASHKKPRLINGE--TK----T------LSSTTATKPKLHECSICGQEFAMGQA   82 (150)
Q Consensus        17 ~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~k~~~c~--~~----~------~h~~~h~~~kp~~C~~Cgk~f~~~~~   82 (150)
                      +++++|.|..  |++.|.....|..|++.|.++++|.|.  ..    .      .|+++|.++++|.|..|++.|.....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            6889999997  999999999999999999999999887  31    1      78899999999999999999999999


Q ss_pred             HHHHhHhcccchhhcc--cccccccCC
Q 031966           83 LGGHMRRHRIAMNESL--NSAVIVSQS  107 (150)
Q Consensus        83 l~~H~~~h~~~~~~~~--~~~~~~~~~  107 (150)
                      |..|+++|+++++..+  ..+......
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~  108 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFAR  108 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESS
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCC
Confidence            9999999999988877  555544433

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=9.5e-18  Score=101.52  Aligned_cols=71  Identities=25%  Similarity=0.519  Sum_probs=55.4

Q ss_pred             cccccccchhhhhcCCCCceecC--CCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccc
Q 031966            3 LTRSNRAKLPIKKRLASDVFECK--TCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMG   80 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~   80 (150)
                      |.....|..|+++|.++++|.|.  .|++.|.....|..|+++|                  .++++|.|..|++.|...
T Consensus        17 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~C~~~f~~~   78 (89)
T 2wbs_A           17 YTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH------------------TGHRPFQCQKCDRAFSRS   78 (89)
T ss_dssp             ESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHH------------------HCCCCEECSSSSCEESSH
T ss_pred             CCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHc------------------CCCCCccCCCCCcccCCH
Confidence            55556666677677666677775  4777777777777676666                  788999999999999999


Q ss_pred             hHHHHHhHhcc
Q 031966           81 QALGGHMRRHR   91 (150)
Q Consensus        81 ~~l~~H~~~h~   91 (150)
                      +.|..|+++|.
T Consensus        79 ~~l~~H~~~H~   89 (89)
T 2wbs_A           79 DHLALHMKRHF   89 (89)
T ss_dssp             HHHHHHGGGGC
T ss_pred             HHHHHHHHhhC
Confidence            99999999884

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=3.5e-17  Score=104.70  Aligned_cols=94  Identities=21%  Similarity=0.240  Sum_probs=82.2

Q ss_pred             CCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------cccc---ccCCCCceeccccccccccchHH
Q 031966           17 LASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSST---TATKPKLHECSICGQEFAMGQAL   83 (150)
Q Consensus        17 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~---~h~~~kp~~C~~Cgk~f~~~~~l   83 (150)
                      +|+++|.|.+|++.|.....|..|+++|.++++|.|....          .|+.   .+.++++|.|.+|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            6789999999999999999999999999999999987721          5665   46889999999999999999999


Q ss_pred             HHHhHhcccchhhcccccccccCCCCc
Q 031966           84 GGHMRRHRIAMNESLNSAVIVSQSPPV  110 (150)
Q Consensus        84 ~~H~~~h~~~~~~~~~~~~~~~~~~~~  110 (150)
                      ..|+++|.++++..+..+.........
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~  109 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKD  109 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHH
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHH
Confidence            999999999999988887766555433

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.69  E-value=3.4e-18  Score=111.62  Aligned_cols=79  Identities=13%  Similarity=0.111  Sum_probs=69.4

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCC------
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKP------   65 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~------   65 (150)
                      .|.....|..|+++|++++||.|++|++.|.....|..|+++|+++++|.|....          .|+++|.++      
T Consensus        31 ~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~  110 (133)
T 2lt7_A           31 SYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDS  110 (133)
T ss_dssp             EESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSS
T ss_pred             CcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCC
Confidence            5888899999999999999999999999999999999999999999999987721          777777665      


Q ss_pred             Cceeccccccccccc
Q 031966           66 KLHECSICGQEFAMG   80 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~   80 (150)
                      ++|.|..|++.|...
T Consensus       111 k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A          111 KLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             CCEEECCCCSSCCCC
T ss_pred             CCeecCCCCchhhhc
Confidence            469999999988643

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.5e-17  Score=95.37  Aligned_cols=63  Identities=21%  Similarity=0.467  Sum_probs=57.0

Q ss_pred             hhhcCCCCceecCCCCCcCCCHHHHHhhHHh-cCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcc
Q 031966           13 IKKRLASDVFECKTCNRQFPSFQALGGHRAS-HKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        13 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      +++|++++||.|..|++.|.....|..|++. |.                 .+++||.|..||+.|...+.|..|+++|+
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~-----------------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK-----------------RNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSS-----------------SSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcC-----------------CCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            4678999999999999999999999999987 52                 36789999999999999999999999987


Q ss_pred             c
Q 031966           92 I   92 (150)
Q Consensus        92 ~   92 (150)
                      +
T Consensus        65 ~   65 (66)
T 2drp_A           65 K   65 (66)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.68  E-value=2.5e-17  Score=91.71  Aligned_cols=57  Identities=32%  Similarity=0.441  Sum_probs=50.0

Q ss_pred             CCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhccc
Q 031966           18 ASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        18 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      |+++|.|.+|++.|.....|..|+++|                  .+++||.|.+|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTH------------------TGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHH------------------HCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHc------------------CCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            578999999999999999999999999                  778999999999999999999999999864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.65  E-value=1.5e-16  Score=88.52  Aligned_cols=56  Identities=21%  Similarity=0.414  Sum_probs=52.9

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccch
Q 031966           21 VFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      ||.|..|++.|.....|..|+++|                  .+++||.|..||+.|.....|..|+++|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTH------------------TDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHT------------------SSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhc------------------CCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            689999999999999999999999                  77889999999999999999999999998874

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=2.4e-16  Score=92.08  Aligned_cols=66  Identities=26%  Similarity=0.473  Sum_probs=57.1

Q ss_pred             ccchhh-hhcCCCCceecC--CCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHH
Q 031966            8 RAKLPI-KKRLASDVFECK--TCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALG   84 (150)
Q Consensus         8 ~l~~h~-~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~   84 (150)
                      .+..|+ .+|.++++|.|.  .|++.|.....|..|+++|                  .+++||.|.+||+.|...+.|.
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h------------------~~~~~~~C~~C~~~f~~~~~l~   66 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIH------------------TGQKPFQCRICMRNFSRSDHLT   66 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHH------------------HCCCCEECTTTCCEESCHHHHH
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhh------------------CCCCCeECCCCCchhCCHHHHH
Confidence            344444 468899999997  6999999999999999999                  6788999999999999999999


Q ss_pred             HHhHhcc
Q 031966           85 GHMRRHR   91 (150)
Q Consensus        85 ~H~~~h~   91 (150)
                      +|+++|+
T Consensus        67 ~H~~~Ht   73 (73)
T 1f2i_G           67 THIRTHT   73 (73)
T ss_dssp             HHHTTCC
T ss_pred             HHHHhcC
Confidence            9999884

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.62  E-value=1.1e-16  Score=103.47  Aligned_cols=70  Identities=21%  Similarity=0.303  Sum_probs=62.0

Q ss_pred             cccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchH
Q 031966            3 LTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQA   82 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~   82 (150)
                      |.....|..|+ .|++++||.|.+||+.|.....|..|+++|                    ++||.|..||+.|...+.
T Consensus        57 ~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--------------------~~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           57 LDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--------------------EHTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             TTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--------------------CCCCBCTTTCCBCSSHHH
T ss_pred             cCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--------------------CCCCCCCCCCcccCCHHH
Confidence            34556677776 699999999999999999999999999987                    267899999999999999


Q ss_pred             HHHHhHhcccc
Q 031966           83 LGGHMRRHRIA   93 (150)
Q Consensus        83 l~~H~~~h~~~   93 (150)
                      |..|+++|++.
T Consensus       116 l~~H~~~h~~~  126 (129)
T 2wbt_A          116 ALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHTTCC
T ss_pred             HHHHHHHHCCc
Confidence            99999999876

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=4.4e-16  Score=87.52  Aligned_cols=57  Identities=30%  Similarity=0.549  Sum_probs=52.5

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHh-Hhcccch
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHM-RRHRIAM   94 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~-~~h~~~~   94 (150)
                      +||.|..|++.|.....|..|+++|                  .+++||.|..|++.|.....|..|+ ++|.++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSH------------------TNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTT------------------TSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHh------------------CCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            5899999999999999999999998                  6788999999999999999999997 6888764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.62  E-value=6.3e-16  Score=99.00  Aligned_cols=92  Identities=20%  Similarity=0.292  Sum_probs=77.2

Q ss_pred             CCCceecC--CCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------ccccccCCCCceeccc--cccccccchHH
Q 031966           18 ASDVFECK--TCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSSTTATKPKLHECSI--CGQEFAMGQAL   83 (150)
Q Consensus        18 ~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~~h~~~kp~~C~~--Cgk~f~~~~~l   83 (150)
                      ++++|.|.  .|++.|.....|..|+++| ++++|.|....          .|+++|.++++|.|..  |++.|.....|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            46789999  8999999999999999999 88999887621          7899999999999986  99999999999


Q ss_pred             HHHhHhcccchhhccc--ccccccCCCCc
Q 031966           84 GGHMRRHRIAMNESLN--SAVIVSQSPPV  110 (150)
Q Consensus        84 ~~H~~~h~~~~~~~~~--~~~~~~~~~~~  110 (150)
                      ..|+++|.++++..+.  .+.........
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  109 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTN  109 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTT
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHH
Confidence            9999999999888874  46555554443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.58  E-value=5.7e-16  Score=92.66  Aligned_cols=69  Identities=17%  Similarity=0.265  Sum_probs=61.7

Q ss_pred             ccccccccchhhhhcCCCCceecCC--CCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccc---cccc
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKT--CNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSI---CGQE   76 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~---Cgk~   76 (150)
                      .|.....|..|+++|.++++|.|..  |++.|.....|..|+++|                  .+   |.|..   |++.
T Consensus        12 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h------------------~~---~~C~~~~~C~~~   70 (85)
T 2j7j_A           12 AFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH------------------AG---YPCKKDDSCSFV   70 (85)
T ss_dssp             EESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHH------------------HS---EECCSCSSCCCE
T ss_pred             ccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHh------------------CC---CCCCCCCCCCCc
Confidence            4777888999999999999999988  999999999999999988                  44   88999   9999


Q ss_pred             cccchHHHHHhHhcc
Q 031966           77 FAMGQALGGHMRRHR   91 (150)
Q Consensus        77 f~~~~~l~~H~~~h~   91 (150)
                      |.....|..|+++|+
T Consensus        71 f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           71 GKTWTLYLKHVAECH   85 (85)
T ss_dssp             ESSHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHhcC
Confidence            999999999999874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=3.1e-15  Score=91.58  Aligned_cols=52  Identities=19%  Similarity=0.164  Sum_probs=34.0

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhcccccccccCCC
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSP  108 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~  108 (150)
                      .|++.|.++++|.|..|++.|.....|..|+++|.++++..+..+.......
T Consensus        26 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   77 (96)
T 2dmd_A           26 THMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNS   77 (96)
T ss_dssp             HHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSH
T ss_pred             HHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCH
Confidence            5666666667777777777777777777777777666666666555444443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=3.3e-15  Score=88.34  Aligned_cols=70  Identities=26%  Similarity=0.418  Sum_probs=61.6

Q ss_pred             cCCCCceecCC--CCCcCCCHHHHHhhHH-hcCCCCCCCCCcccccccccCCCCceeccc--cccccccchHHHHHhHhc
Q 031966           16 RLASDVFECKT--CNRQFPSFQALGGHRA-SHKKPRLINGETKTLSSTTATKPKLHECSI--CGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        16 h~~~~~~~C~~--C~k~f~~~~~L~~H~~-~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~--Cgk~f~~~~~l~~H~~~h   90 (150)
                      .+++++|.|..  |++.|.....|..|++ .|                  .++++|.|.+  |++.|.....|..|+++|
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H------------------~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H   63 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH------------------IHQKSFSCPEPACGKSFNFKKHLKEHMKLH   63 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGG------------------GSCCCEECSCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHh------------------CCCCCeECCCCCCcCccCCHHHHHHHHHHh
Confidence            36789999987  9999999999999998 68                  6778999998  999999999999999999


Q ss_pred             ccchhhccccccc
Q 031966           91 RIAMNESLNSAVI  103 (150)
Q Consensus        91 ~~~~~~~~~~~~~  103 (150)
                      +++++..+..+..
T Consensus        64 ~~~~~~~C~~C~k   76 (79)
T 2dlk_A           64 SDTRDYICEFSGP   76 (79)
T ss_dssp             HTSCCCSCCSSSC
T ss_pred             CCCCCeeCCCCCC
Confidence            9998887766543

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.1e-15  Score=90.48  Aligned_cols=59  Identities=17%  Similarity=0.358  Sum_probs=54.7

Q ss_pred             ccccccccchhhh-hcCCCCceecCC--CCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccc
Q 031966            2 LLTRSNRAKLPIK-KRLASDVFECKT--CNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFA   78 (150)
Q Consensus         2 ~f~~~~~l~~h~~-~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~   78 (150)
                      .|.....|..|++ .|+++++|.|.+  |++.|.....|..|+++|                  .+++||.|.+||+.|.
T Consensus        18 ~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H------------------~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           18 IFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH------------------SDTRDYICEFSGPSSG   79 (79)
T ss_dssp             EESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHH------------------HTSCCCSCCSSSCCCC
T ss_pred             ccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHh------------------CCCCCeeCCCCCCCCC
Confidence            5788889999999 799999999999  999999999999999999                  6778999999999984

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.55  E-value=6e-15  Score=90.12  Aligned_cols=75  Identities=24%  Similarity=0.379  Sum_probs=66.3

Q ss_pred             CCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccc--h
Q 031966           17 LASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIA--M   94 (150)
Q Consensus        17 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~--~   94 (150)
                      +++++|.|.+|++.|.....|..|+++|                  .++++|.|..|++.|.....|..|+++|.++  +
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   64 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSH------------------SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK   64 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHS------------------CSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhc------------------CCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            6889999999999999999999999999                  6778999999999999999999999999987  7


Q ss_pred             hhcccccccccCCCC
Q 031966           95 NESLNSAVIVSQSPP  109 (150)
Q Consensus        95 ~~~~~~~~~~~~~~~  109 (150)
                      +..+..+........
T Consensus        65 ~~~C~~C~~~f~~~~   79 (95)
T 2yt9_A           65 PYICQSCGKGFSRPD   79 (95)
T ss_dssp             SBCCSSSCCCBSSHH
T ss_pred             ceECCCccchhCCHH
Confidence            777777766555443

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.55  E-value=2.1e-16  Score=95.70  Aligned_cols=70  Identities=17%  Similarity=0.260  Sum_probs=44.9

Q ss_pred             cccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchH
Q 031966            3 LTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQA   82 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~   82 (150)
                      |.....|..|+++|+++++|.|..|++.|.....|..|+++|                  .+ .+|.|..|++.|.....
T Consensus        13 f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h------------------~~-~~~~c~~C~~~f~~~~~   73 (88)
T 1llm_C           13 FSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ------------------HI-LPILEDKVEELLSKNYH   73 (88)
T ss_dssp             ESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHH------------------TH-HHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHh------------------CC-CcchHHHHHHHHHHHhh
Confidence            445555566666666666666666666666666666665555                  32 67777778888877777


Q ss_pred             HHHHhHhcc
Q 031966           83 LGGHMRRHR   91 (150)
Q Consensus        83 l~~H~~~h~   91 (150)
                      |..|++.+.
T Consensus        74 L~~H~~~~h   82 (88)
T 1llm_C           74 LENEVARLK   82 (88)
T ss_dssp             HHHHHHHHH
T ss_pred             hHHHHHHHH
Confidence            877776544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.54  E-value=7.4e-15  Score=97.46  Aligned_cols=98  Identities=19%  Similarity=0.143  Sum_probs=81.6

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHHh-cCCCCC--------CCCCcc----c------ccccccCCCCceeccc--c
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRAS-HKKPRL--------INGETK----T------LSSTTATKPKLHECSI--C   73 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-h~~~k~--------~~c~~~----~------~h~~~h~~~kp~~C~~--C   73 (150)
                      ++.++.+|.|..|++.|.....|..|++. |.++++        |.|...    .      .|+++|.++++|.|..  |
T Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             CCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred             echhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence            34567899999999999999999999997 877665        667651    1      7889999999999998  9


Q ss_pred             ccccccchHHHHHhHhcccchhhcccc--cccccCCCCccc
Q 031966           74 GQEFAMGQALGGHMRRHRIAMNESLNS--AVIVSQSPPVLR  112 (150)
Q Consensus        74 gk~f~~~~~l~~H~~~h~~~~~~~~~~--~~~~~~~~~~~~  112 (150)
                      ++.|.....|..|+++|+++++..+..  +.........+.
T Consensus        99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~  139 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRK  139 (155)
T ss_dssp             CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHH
T ss_pred             CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHH
Confidence            999999999999999999999888875  666655544433

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.54  E-value=1.6e-15  Score=85.51  Aligned_cols=47  Identities=13%  Similarity=0.217  Sum_probs=43.9

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .|.....|..|+++|+|++||.|.+||+.|...++|..|+++|+|++
T Consensus        13 ~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C           13 TYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             EESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             EeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            58889999999999999999999999999999999999999997763

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=6.8e-17  Score=94.13  Aligned_cols=70  Identities=17%  Similarity=0.196  Sum_probs=61.5

Q ss_pred             cccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHH
Q 031966            5 RSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALG   84 (150)
Q Consensus         5 ~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~   84 (150)
                      ....|..|+++|.++++|.|.+|++.|.....|..                         +++|.|..||+.|.....|.
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------------------------~~~~~C~~C~~~f~~~~~l~   56 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------------------------RKTPMCEKCRKDSCQEAALN   56 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------------------------SSSCCCHHHHHTCSCCCSSC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------------------------CCCCCCCCCChhhcCHHHHH
Confidence            46789999999999999999999999988776643                         47899999999999999999


Q ss_pred             HHhHhcccchhhccc
Q 031966           85 GHMRRHRIAMNESLN   99 (150)
Q Consensus        85 ~H~~~h~~~~~~~~~   99 (150)
                      .|+++|+++++..+.
T Consensus        57 ~H~~~H~~~~~~~C~   71 (73)
T 2ctu_A           57 KDEGNESGKKTSGPS   71 (73)
T ss_dssp             CCSSCCCCCCCSSCC
T ss_pred             HHHHhhcCCCCCCCC
Confidence            999999998876654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.53  E-value=1.5e-14  Score=90.05  Aligned_cols=47  Identities=19%  Similarity=0.226  Sum_probs=23.1

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccccccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVI  103 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~  103 (150)
                      .|+++|.++++|.|..|++.|.....|..|+++|.++++..+..+..
T Consensus        35 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   81 (106)
T 2ee8_A           35 IHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGK   81 (106)
T ss_dssp             HHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCC
T ss_pred             HHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCC
Confidence            34444455555555555555555555555555555444444444433

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=6e-15  Score=78.45  Aligned_cols=43  Identities=16%  Similarity=0.234  Sum_probs=36.9

Q ss_pred             chhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           10 KLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        10 ~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      ..|+++|+++++|.|.+|++.|...+.|..|+++|.++++|.|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytj_A            1 GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP   43 (46)
T ss_dssp             CCSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSC
T ss_pred             CCcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            3689999999999999999999999999999999954444433

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=6.6e-15  Score=78.26  Aligned_cols=38  Identities=18%  Similarity=0.393  Sum_probs=34.5

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|.+++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK   39 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSS
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCC
Confidence            58899999999999999999999999999999994433

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=6.3e-15  Score=78.37  Aligned_cols=40  Identities=18%  Similarity=0.353  Sum_probs=35.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|+++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCC
Confidence            5889999999999999999999999999999999444333

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.52  E-value=6.5e-15  Score=78.32  Aligned_cols=39  Identities=15%  Similarity=0.343  Sum_probs=34.8

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|+++++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKP   40 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            588999999999999999999999999999999944433

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.52  E-value=6.7e-15  Score=88.96  Aligned_cols=56  Identities=32%  Similarity=0.606  Sum_probs=53.1

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhccc
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      ++||.|.+|++.|.....|..|+++|                  .+++||.|..||+.|.....|..|+++|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H------------------~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTH------------------TGEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHH------------------HCCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHc------------------CCCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            58999999999999999999999999                  678899999999999999999999999885

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.52  E-value=7.5e-15  Score=88.75  Aligned_cols=74  Identities=23%  Similarity=0.382  Sum_probs=64.4

Q ss_pred             CCCceecC--CCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccchh
Q 031966           18 ASDVFECK--TCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMN   95 (150)
Q Consensus        18 ~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~   95 (150)
                      |+++|.|.  .|++.|.....|..|+++|                  .++++|.|..|++.|.....|..|+++|.++++
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   62 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIH------------------TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP   62 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHH------------------HCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHh------------------CCCCCccCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            57899998  6999999999999999998                  677899999999999999999999999999998


Q ss_pred             hcccccccccCCCC
Q 031966           96 ESLNSAVIVSQSPP  109 (150)
Q Consensus        96 ~~~~~~~~~~~~~~  109 (150)
                      ..+..+........
T Consensus        63 ~~C~~C~~~f~~~~   76 (90)
T 1a1h_A           63 FACDICGRKFARSD   76 (90)
T ss_dssp             EECTTTCCEESSHH
T ss_pred             ccCCCCCchhCCHH
Confidence            88887766555443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=6.8e-15  Score=78.20  Aligned_cols=38  Identities=16%  Similarity=0.234  Sum_probs=34.6

Q ss_pred             chhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           10 KLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        10 ~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      +.|+++|++++||.|.+|++.|.....|..|+++|.++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2eme_A            1 GSSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGE   38 (46)
T ss_dssp             CCCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCC
T ss_pred             CCCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCC
Confidence            36899999999999999999999999999999999443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=6.7e-15  Score=78.27  Aligned_cols=40  Identities=18%  Similarity=0.313  Sum_probs=35.4

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|+++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPS   41 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6889999999999999999999999999999999444333

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.52  E-value=6.5e-15  Score=78.36  Aligned_cols=41  Identities=20%  Similarity=0.337  Sum_probs=35.8

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLIN   51 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~   51 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|.++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            58899999999999999999999999999999995444333

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.52  E-value=9.7e-16  Score=87.01  Aligned_cols=55  Identities=15%  Similarity=0.327  Sum_probs=49.0

Q ss_pred             cchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHH
Q 031966            9 AKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALG   84 (150)
Q Consensus         9 l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~   84 (150)
                      |..|+++|++++||.|..||+.|.....|.   ++|                  .+++||.|.+||+.|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H------------------~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFD------------------PMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEE------------------TTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhc------------------CCCCCEECCCCCCccccCcccc
Confidence            778999999999999999999999988875   677                  7889999999999999877654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=6.2e-15  Score=78.41  Aligned_cols=39  Identities=21%  Similarity=0.382  Sum_probs=34.8

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|.++++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCC
Confidence            588999999999999999999999999999999944433

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=4.2e-15  Score=79.11  Aligned_cols=41  Identities=15%  Similarity=0.248  Sum_probs=35.9

Q ss_pred             chhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           10 KLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        10 ~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      +.|+++|++++||.|.+||+.|...+.|..|+++|+++++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSS   41 (46)
T ss_dssp             CCCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSS
T ss_pred             CCCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCC
Confidence            36899999999999999999999999999999999444333

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=5.8e-15  Score=78.56  Aligned_cols=41  Identities=17%  Similarity=0.276  Sum_probs=35.7

Q ss_pred             chhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           10 KLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        10 ~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      ..|+++|+++++|.|.+|++.|...+.|..|+++|.++++|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em5_A            1 GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCS
T ss_pred             CCCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCC
Confidence            36899999999999999999999999999999999444333

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=6e-15  Score=78.42  Aligned_cols=40  Identities=15%  Similarity=0.218  Sum_probs=35.4

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|.++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPS   41 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTT
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCC
Confidence            5889999999999999999999999999999999444333

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.51  E-value=7e-15  Score=78.15  Aligned_cols=40  Identities=18%  Similarity=0.242  Sum_probs=35.3

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|+++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPS   41 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCS
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5889999999999999999999999999999999444333

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=9.1e-15  Score=77.70  Aligned_cols=37  Identities=16%  Similarity=0.309  Sum_probs=34.1

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|.++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGE   38 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCC
Confidence            5889999999999999999999999999999999443

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=9.2e-15  Score=77.72  Aligned_cols=41  Identities=17%  Similarity=0.310  Sum_probs=35.8

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLIN   51 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~   51 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG   42 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSS
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            58899999999999999999999999999999994443333

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=7.1e-15  Score=78.12  Aligned_cols=40  Identities=15%  Similarity=0.319  Sum_probs=35.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|.++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPS   41 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            5889999999999999999999999999999999444333

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.4e-15  Score=77.84  Aligned_cols=40  Identities=18%  Similarity=0.227  Sum_probs=35.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPS   41 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCS
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            5889999999999999999999999999999999444333

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=6.8e-15  Score=77.50  Aligned_cols=40  Identities=20%  Similarity=0.331  Sum_probs=34.9

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCC
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLIN   51 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~   51 (150)
                      |+++|++++||.|.+|++.|...+.|..|+++|.++++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            7889999999999999999999999999999994443333

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.4e-15  Score=77.93  Aligned_cols=41  Identities=20%  Similarity=0.340  Sum_probs=35.6

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLIN   51 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~   51 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|.++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            48899999999999999999999999999999994443333

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=7.7e-15  Score=78.03  Aligned_cols=41  Identities=17%  Similarity=0.345  Sum_probs=35.7

Q ss_pred             chhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           10 KLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        10 ~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      ..|+++|+++++|.|.+|++.|...+.|..|+++|.++++|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en1_A            1 GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPS   41 (46)
T ss_dssp             CCSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCS
T ss_pred             CCcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            36899999999999999999999999999999999444333

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=9.6e-15  Score=77.68  Aligned_cols=37  Identities=14%  Similarity=0.280  Sum_probs=33.8

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|.++
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGE   38 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999999999433

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.51  E-value=7.3e-15  Score=78.13  Aligned_cols=41  Identities=15%  Similarity=0.317  Sum_probs=35.7

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLIN   51 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~   51 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|.++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG   42 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCC
Confidence            58899999999999999999999999999999994443333

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.6e-15  Score=77.80  Aligned_cols=37  Identities=16%  Similarity=0.382  Sum_probs=33.9

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGE   38 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            5889999999999999999999999999999999433

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=7.5e-15  Score=78.07  Aligned_cols=39  Identities=15%  Similarity=0.317  Sum_probs=34.7

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|.++++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP   40 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCC
Confidence            588999999999999999999999999999999944333

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=9.7e-15  Score=77.63  Aligned_cols=40  Identities=20%  Similarity=0.383  Sum_probs=35.1

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPS   41 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCC
Confidence            4889999999999999999999999999999999444333

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=7.9e-15  Score=77.98  Aligned_cols=40  Identities=15%  Similarity=0.300  Sum_probs=35.1

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|.++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPS   41 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCS
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            5889999999999999999999999999999999444333

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=7.8e-15  Score=78.01  Aligned_cols=40  Identities=18%  Similarity=0.341  Sum_probs=35.3

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|.++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPS   41 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCC
Confidence            5889999999999999999999999999999999444333

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.1e-14  Score=77.40  Aligned_cols=40  Identities=18%  Similarity=0.243  Sum_probs=35.0

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|+++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPS   41 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSS
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCC
Confidence            4789999999999999999999999999999999444333

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.50  E-value=1e-14  Score=77.52  Aligned_cols=39  Identities=18%  Similarity=0.318  Sum_probs=34.7

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|.++++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP   40 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCC
Confidence            588999999999999999999999999999999944433

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=8.2e-15  Score=77.92  Aligned_cols=41  Identities=15%  Similarity=0.281  Sum_probs=35.7

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLIN   51 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~   51 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSS
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCC
Confidence            58899999999999999999999999999999994443333

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=6.3e-15  Score=78.37  Aligned_cols=40  Identities=15%  Similarity=0.250  Sum_probs=35.3

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPS   41 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCS
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            5889999999999999999999999999999999444333

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=7.2e-15  Score=78.14  Aligned_cols=40  Identities=15%  Similarity=0.361  Sum_probs=35.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|.++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPS   41 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            5889999999999999999999999999999999444333

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.1e-14  Score=77.44  Aligned_cols=40  Identities=15%  Similarity=0.277  Sum_probs=35.0

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPS   41 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCS
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            4788999999999999999999999999999999444333

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.50  E-value=8.5e-15  Score=77.89  Aligned_cols=39  Identities=21%  Similarity=0.337  Sum_probs=34.7

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|.++++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP   40 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCC
Confidence            488999999999999999999999999999999944433

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.1e-14  Score=77.43  Aligned_cols=40  Identities=20%  Similarity=0.349  Sum_probs=35.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPS   41 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSS
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCC
Confidence            5889999999999999999999999999999999444333

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=9.9e-15  Score=77.56  Aligned_cols=40  Identities=15%  Similarity=0.187  Sum_probs=35.3

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|.++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHS   41 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCS
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            5889999999999999999999999999999999444333

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.50  E-value=1.6e-14  Score=85.70  Aligned_cols=69  Identities=20%  Similarity=0.376  Sum_probs=62.3

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccchhhcccc
Q 031966           21 VFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNS  100 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  100 (150)
                      ||.|..|++.|.....|..|+++|                  .++++|.|..|++.|.....|..|+++|.++++..+..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   62 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIH------------------SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV   62 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH------------------HTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT
T ss_pred             CccCCCCcccccCchhHHHHHHHc------------------CCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC
Confidence            689999999999999999999998                  67789999999999999999999999999998888877


Q ss_pred             cccccCC
Q 031966          101 AVIVSQS  107 (150)
Q Consensus       101 ~~~~~~~  107 (150)
                      +......
T Consensus        63 C~~~f~~   69 (82)
T 2kmk_A           63 CGKAFSQ   69 (82)
T ss_dssp             TSCEESS
T ss_pred             cchhhCC
Confidence            7655444

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1e-14  Score=77.47  Aligned_cols=40  Identities=18%  Similarity=0.256  Sum_probs=35.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCS   41 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSS
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCC
Confidence            5889999999999999999999999999999999444333

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.5e-14  Score=76.84  Aligned_cols=39  Identities=18%  Similarity=0.308  Sum_probs=34.7

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|+++++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKP   40 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCC
Confidence            478999999999999999999999999999999944433

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=2e-14  Score=82.35  Aligned_cols=59  Identities=19%  Similarity=0.397  Sum_probs=53.0

Q ss_pred             cCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceecc-ccccccccchHHHHHhHhcccch
Q 031966           16 RLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECS-ICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        16 h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~-~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      ..+++||.|..|++.|. .+.|..|+++ .                  +++||.|. .||+.|...+.|..|+++|....
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~------------------~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-C------------------PRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-C------------------SSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-c------------------CCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            46789999999999999 9999999986 3                  56899999 99999999999999999987654

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.49  E-value=1.5e-14  Score=76.94  Aligned_cols=39  Identities=15%  Similarity=0.324  Sum_probs=34.7

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP   40 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            578999999999999999999999999999999944433

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.3e-14  Score=77.08  Aligned_cols=42  Identities=14%  Similarity=0.249  Sum_probs=36.7

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            588999999999999999999999999999999955544444

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=8.8e-15  Score=77.79  Aligned_cols=39  Identities=15%  Similarity=0.309  Sum_probs=34.7

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|.++++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCS
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            588999999999999999999999999999999944433

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.5e-14  Score=76.84  Aligned_cols=38  Identities=16%  Similarity=0.303  Sum_probs=34.3

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQK   39 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCS
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCC
Confidence            47899999999999999999999999999999994433

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.49  E-value=2.8e-14  Score=82.95  Aligned_cols=62  Identities=27%  Similarity=0.455  Sum_probs=55.2

Q ss_pred             hhhhhcCCCCceecCC--CCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccc--cccccccchHHHHH
Q 031966           11 LPIKKRLASDVFECKT--CNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSI--CGQEFAMGQALGGH   86 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~--Cgk~f~~~~~l~~H   86 (150)
                      .....+...++|.|..  |++.|.....|..|+++|                  .+++||.|.+  |++.|.....|..|
T Consensus         7 ~~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H------------------~~~~~~~C~~~~C~k~f~~~~~l~~H   68 (72)
T 2epa_A            7 GPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH------------------TGEKPFSCSWKGCERRFARSDELSRH   68 (72)
T ss_dssp             CCCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHH------------------SSSCSEECCCTTCCCEESSHHHHHHH
T ss_pred             CCCCCccccCceeCCCCCCccccCCHHHHHHHHHhc------------------CCCCCccCCCCCCCcccCCHHHHHhH
Confidence            3445667889999998  999999999999999999                  7788999965  99999999999999


Q ss_pred             hHhc
Q 031966           87 MRRH   90 (150)
Q Consensus        87 ~~~h   90 (150)
                      +++|
T Consensus        69 ~~~H   72 (72)
T 2epa_A           69 RRTH   72 (72)
T ss_dssp             TTTC
T ss_pred             hhcC
Confidence            9876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=7.1e-15  Score=78.17  Aligned_cols=40  Identities=18%  Similarity=0.342  Sum_probs=35.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|.++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPS   41 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCS
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCC
Confidence            5889999999999999999999999999999999444333

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.3e-14  Score=77.27  Aligned_cols=39  Identities=15%  Similarity=0.295  Sum_probs=34.6

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|.++++
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP   40 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            478899999999999999999999999999999944433

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.2e-14  Score=77.30  Aligned_cols=39  Identities=18%  Similarity=0.323  Sum_probs=34.6

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP   40 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCS
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            478899999999999999999999999999999944433

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.1e-14  Score=77.39  Aligned_cols=40  Identities=15%  Similarity=0.347  Sum_probs=35.3

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|.++++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPS   41 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCS
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCC
Confidence            5889999999999999999999999999999999444333

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.4e-14  Score=76.36  Aligned_cols=41  Identities=17%  Similarity=0.245  Sum_probs=35.5

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHH-hcCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRA-SHKKPRLIN   51 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~k~~~   51 (150)
                      .|+++|++++||.|.+|++.|.....|..|++ +|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~   43 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSG   43 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSS
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCC
Confidence            58899999999999999999999999999999 994443333

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.47  E-value=3.7e-14  Score=78.08  Aligned_cols=48  Identities=21%  Similarity=0.452  Sum_probs=43.8

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHH-hcCCCCCCCCCcccccccccCCCCceecccccccccc
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRA-SHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAM   79 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~   79 (150)
                      ..|++++||.|.+|++.|.....|..|++ +|                  .+++||.|.+|++.|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H------------------~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH------------------TSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTS------------------CCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhc------------------CCCCCccCCCCCCCCCC
Confidence            45789999999999999999999999997 88                  77889999999999975

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.8e-14  Score=76.59  Aligned_cols=38  Identities=13%  Similarity=0.274  Sum_probs=34.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.+++
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK   39 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCC
Confidence            47889999999999999999999999999999994433

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.7e-14  Score=75.32  Aligned_cols=44  Identities=18%  Similarity=0.346  Sum_probs=39.0

Q ss_pred             chhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           10 KLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        10 ~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      +.|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            1 GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            36899999999999999999999999999999999666666654

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.2e-14  Score=74.73  Aligned_cols=43  Identities=14%  Similarity=0.322  Sum_probs=38.4

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=6.4e-14  Score=72.84  Aligned_cols=41  Identities=15%  Similarity=0.245  Sum_probs=37.0

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      |+++|++++||.|.+|++.|...+.|..|+++|.++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            67899999999999999999999999999999976666655

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.3e-14  Score=74.71  Aligned_cols=43  Identities=16%  Similarity=0.292  Sum_probs=38.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|..|++.|...+.|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            5889999999999999999999999999999999666666554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.45  E-value=5.8e-14  Score=73.06  Aligned_cols=41  Identities=17%  Similarity=0.316  Sum_probs=37.1

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|.++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            67899999999999999999999999999999976666655

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.45  E-value=4.7e-14  Score=74.96  Aligned_cols=43  Identities=19%  Similarity=0.319  Sum_probs=38.6

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.45  E-value=5.7e-14  Score=77.26  Aligned_cols=49  Identities=10%  Similarity=0.101  Sum_probs=45.4

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|.....|..|+++|+++++|.|.+||+.|...+.|..|+++|+++++|
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            4778889999999999999999999999999999999999999777765

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=6.9e-14  Score=74.29  Aligned_cols=43  Identities=16%  Similarity=0.329  Sum_probs=38.7

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            6889999999999999999999999999999999766666654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.1e-14  Score=75.19  Aligned_cols=42  Identities=19%  Similarity=0.289  Sum_probs=36.9

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999965555544

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=6.8e-14  Score=74.22  Aligned_cols=43  Identities=16%  Similarity=0.246  Sum_probs=38.5

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|..|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=6e-14  Score=74.45  Aligned_cols=43  Identities=16%  Similarity=0.273  Sum_probs=38.6

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            5889999999999999999999999999999999766666654

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=6e-14  Score=74.48  Aligned_cols=43  Identities=16%  Similarity=0.322  Sum_probs=38.5

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.7e-14  Score=74.63  Aligned_cols=43  Identities=16%  Similarity=0.254  Sum_probs=38.3

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999666666553

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.2e-14  Score=73.19  Aligned_cols=42  Identities=17%  Similarity=0.242  Sum_probs=37.7

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|+++++|.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999976666654

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.5e-14  Score=74.58  Aligned_cols=43  Identities=16%  Similarity=0.333  Sum_probs=38.4

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=7e-14  Score=74.27  Aligned_cols=43  Identities=14%  Similarity=0.356  Sum_probs=38.3

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999999999999999999999666666654

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=9.4e-14  Score=73.76  Aligned_cols=43  Identities=21%  Similarity=0.363  Sum_probs=38.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4789999999999999999999999999999999766666653

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=5.7e-14  Score=74.63  Aligned_cols=43  Identities=19%  Similarity=0.310  Sum_probs=38.6

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=7e-14  Score=73.51  Aligned_cols=43  Identities=16%  Similarity=0.220  Sum_probs=38.9

Q ss_pred             chhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           10 KLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        10 ~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      ..|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            1 GSSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CCcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            3689999999999999999999999999999999977777665

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=7e-14  Score=74.17  Aligned_cols=43  Identities=19%  Similarity=0.302  Sum_probs=38.4

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=7.7e-14  Score=74.14  Aligned_cols=43  Identities=16%  Similarity=0.288  Sum_probs=38.3

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            4789999999999999999999999999999999766666664

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=7.3e-14  Score=74.14  Aligned_cols=43  Identities=14%  Similarity=0.317  Sum_probs=38.5

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=6.2e-14  Score=74.47  Aligned_cols=43  Identities=21%  Similarity=0.315  Sum_probs=38.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5889999999999999999999999999999999666666553

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=7.8e-14  Score=74.03  Aligned_cols=43  Identities=16%  Similarity=0.292  Sum_probs=38.5

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=5.2e-14  Score=74.78  Aligned_cols=43  Identities=16%  Similarity=0.281  Sum_probs=38.8

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999777666664

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=6.6e-14  Score=73.54  Aligned_cols=42  Identities=17%  Similarity=0.181  Sum_probs=38.0

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            588999999999999999999999999999999976666655

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=7.8e-14  Score=74.03  Aligned_cols=43  Identities=19%  Similarity=0.230  Sum_probs=38.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999666666654

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=8.4e-14  Score=73.95  Aligned_cols=43  Identities=16%  Similarity=0.332  Sum_probs=38.5

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=8.3e-14  Score=73.14  Aligned_cols=42  Identities=17%  Similarity=0.280  Sum_probs=38.1

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            588999999999999999999999999999999976666655

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=1.2e-13  Score=84.32  Aligned_cols=69  Identities=23%  Similarity=0.246  Sum_probs=55.8

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHh-cCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           20 DVFECKTCNRQFPSFQALGGHRAS-HKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~-h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      ..|.|..|++.|.....|..|+++ |.++++..+          ..-++|.|..|++.|.....|..|+++|+++++..+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~----------~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNN----------HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSC----------CCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCc----------cceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            457899999999999999999998 855443211          011238999999999999999999999999987665

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=7.9e-14  Score=73.97  Aligned_cols=43  Identities=14%  Similarity=0.266  Sum_probs=38.5

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=7.2e-14  Score=73.42  Aligned_cols=42  Identities=17%  Similarity=0.291  Sum_probs=37.9

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999976666655

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=4.6e-14  Score=83.08  Aligned_cols=69  Identities=14%  Similarity=0.222  Sum_probs=62.1

Q ss_pred             ccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHH
Q 031966            6 SNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGG   85 (150)
Q Consensus         6 ~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~   85 (150)
                      ...|..|+++|.+++|+.|..|++.|. ...|..|+ .|                  .+++||.|..|++.|. ...|..
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~------------------c~~~~~~C~~C~~~~~-~~~l~~   60 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DY------------------CGARTELCGNCGRNVL-VKDLKT   60 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HH------------------HHHCEEECSSSCCEEE-TTGGGT
T ss_pred             chHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hH------------------cCCCceEcccCCCcCc-HHHHHH
Confidence            467999999999999999999999995 89999999 77                  6789999999999987 599999


Q ss_pred             HhHhcccchh
Q 031966           86 HMRRHRIAMN   95 (150)
Q Consensus        86 H~~~h~~~~~   95 (150)
                      |+++|.+++.
T Consensus        61 H~~~c~~~~~   70 (75)
T 2d9k_A           61 HPEVCGREGS   70 (75)
T ss_dssp             HHHHBTTBSS
T ss_pred             HHHHccCCcC
Confidence            9999998753

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=9.6e-14  Score=72.25  Aligned_cols=41  Identities=20%  Similarity=0.375  Sum_probs=37.5

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      |+++|++++||.|.+|++.|...+.|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            78899999999999999999999999999999977776655

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=9.8e-14  Score=72.95  Aligned_cols=42  Identities=19%  Similarity=0.328  Sum_probs=38.2

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            588999999999999999999999999999999977666665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.42  E-value=1.2e-13  Score=71.83  Aligned_cols=41  Identities=17%  Similarity=0.302  Sum_probs=37.2

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      |+++|++++||.|.+|++.|...+.|..|+++|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            78899999999999999999999999999999977766654

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=8.1e-14  Score=73.92  Aligned_cols=43  Identities=14%  Similarity=0.259  Sum_probs=38.4

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1e-13  Score=73.55  Aligned_cols=43  Identities=19%  Similarity=0.334  Sum_probs=38.5

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999766666654

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=6.9e-14  Score=72.77  Aligned_cols=41  Identities=20%  Similarity=0.355  Sum_probs=37.4

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            78899999999999999999999999999999977766654

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.2e-13  Score=73.26  Aligned_cols=43  Identities=16%  Similarity=0.342  Sum_probs=38.0

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999766666654

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.2e-13  Score=73.36  Aligned_cols=39  Identities=15%  Similarity=0.302  Sum_probs=33.8

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      ++++|+++++|.|.+|++.|.....|..|+++|.++++|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPS   41 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCC
Confidence            567899999999999999999999999999999444333

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=7.9e-14  Score=73.31  Aligned_cols=43  Identities=16%  Similarity=0.301  Sum_probs=38.6

Q ss_pred             chhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           10 KLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        10 ~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      ..|+++|++++||.|.+|++.|.....|..|+++|+++++|.|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            1 GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3688999999999999999999999999999999976666655

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1e-13  Score=73.65  Aligned_cols=43  Identities=19%  Similarity=0.336  Sum_probs=38.3

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999666666553

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.4e-13  Score=73.08  Aligned_cols=43  Identities=16%  Similarity=0.312  Sum_probs=38.3

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCC-CCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKK-PRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~k~~~c~   53 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|++ +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            588999999999999999999999999999999976 6666653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.7e-13  Score=80.59  Aligned_cols=51  Identities=18%  Similarity=0.341  Sum_probs=46.4

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      .|.....|..|+++|+++++|.|.+|++.|.....|..|+++|.+++||.|
T Consensus        27 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           27 SFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             BCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             ccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            578888999999999999999999999999999999999999976666654

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=2.3e-13  Score=71.50  Aligned_cols=42  Identities=21%  Similarity=0.219  Sum_probs=37.8

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            478899999999999999999999999999999976666665

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.7e-13  Score=71.31  Aligned_cols=42  Identities=17%  Similarity=0.182  Sum_probs=37.8

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            588999999999999999999999999999999976666654

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.38  E-value=2.3e-13  Score=71.86  Aligned_cols=43  Identities=16%  Similarity=0.271  Sum_probs=38.4

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccc
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICG   74 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cg   74 (150)
                      ..|++++||.|.+|++.|.....|..|+++|                  +++++|.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H------------------~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSH------------------DGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHH------------------SCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHc------------------cCCCCCCCcCCC
Confidence            4689999999999999999999999999999                  666777888775

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.1e-13  Score=73.50  Aligned_cols=43  Identities=21%  Similarity=0.257  Sum_probs=38.5

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999766666653

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.4e-13  Score=73.06  Aligned_cols=38  Identities=16%  Similarity=0.380  Sum_probs=33.3

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .+++|+++++|.|.+|++.|.....|..|+++|.++++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP   40 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            46789999999999999999999999999999944433

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.37  E-value=5.8e-13  Score=80.12  Aligned_cols=72  Identities=22%  Similarity=0.350  Sum_probs=63.0

Q ss_pred             CCCceecCC--CCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceecc--ccccccccchHHHHHhHhcccc
Q 031966           18 ASDVFECKT--CNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECS--ICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        18 ~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~--~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      +.++|.|..  |++.|.....|..|+++|                  .++++|.|.  .|++.|.....|..|+++|.++
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   63 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLRTH------------------TGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH   63 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHTTS------------------CSSCCEECCSTTTCCEESSHHHHHHHHHHHHCC
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHHhc------------------CCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCC
Confidence            356899999  999999999999999988                  677899997  6999999999999999999999


Q ss_pred             hhhcccccccccCC
Q 031966           94 MNESLNSAVIVSQS  107 (150)
Q Consensus        94 ~~~~~~~~~~~~~~  107 (150)
                      ++..+..+......
T Consensus        64 ~~~~C~~C~~~f~~   77 (89)
T 2wbs_A           64 RPFQCQKCDRAFSR   77 (89)
T ss_dssp             CCEECSSSSCEESS
T ss_pred             CCccCCCCCcccCC
Confidence            98888777655544

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.37  E-value=3.3e-13  Score=72.30  Aligned_cols=43  Identities=19%  Similarity=0.317  Sum_probs=39.2

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceecccccc
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQ   75 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk   75 (150)
                      .|.++++|.|.+|++.|.....|..|+++|                  ++++||.|.+|||
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H------------------~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSH------------------SGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGS------------------CSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhc------------------CCCCCccCCCCCC
Confidence            578899999999999999999999999999                  6778888999986

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=6.6e-13  Score=70.44  Aligned_cols=42  Identities=14%  Similarity=0.189  Sum_probs=37.3

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      ++++|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            467899999999999999999999999999999777666664

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.35  E-value=3.9e-13  Score=78.44  Aligned_cols=49  Identities=14%  Similarity=0.213  Sum_probs=45.5

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++||
T Consensus        26 ~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           26 SFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             eeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            5788889999999999999999999999999999999999999777665

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.35  E-value=5.3e-13  Score=79.49  Aligned_cols=54  Identities=28%  Similarity=0.573  Sum_probs=51.2

Q ss_pred             ceec--CCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccc--cccccccchHHHHHhHhccc
Q 031966           21 VFEC--KTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSI--CGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        21 ~~~C--~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~--Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      ||.|  ..|++.|.....|..|+++|                  .+++||.|..  |++.|.....|..|+++|++
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h------------------~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSH------------------TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH------------------HTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHh------------------CCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            6899  99999999999999999999                  6778999988  99999999999999999998

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.34  E-value=2.1e-12  Score=79.32  Aligned_cols=52  Identities=17%  Similarity=0.389  Sum_probs=40.9

Q ss_pred             ccccccccchhhhhcCCCCceecC--CCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECK--TCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|.....|..|+++|.++++|.|.  .|++.|.....|..|+++|.++++|.|.
T Consensus        26 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   79 (100)
T 2ebt_A           26 VYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCG   79 (100)
T ss_dssp             EESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCS
T ss_pred             cccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECC
Confidence            466677788888888888888885  5888888888888888888888888775

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=6.4e-13  Score=70.12  Aligned_cols=42  Identities=19%  Similarity=0.299  Sum_probs=36.7

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      +.++|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            567899999999999999999999999999999666666553

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=7.9e-13  Score=70.58  Aligned_cols=40  Identities=23%  Similarity=0.361  Sum_probs=34.1

Q ss_pred             hhhhhcCCCCceecC--CCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           11 LPIKKRLASDVFECK--TCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|.++|+++++|.|.  .|++.|.....|..|+++|+++++|
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   43 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPS   43 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            367889999999998  8999999999999999999444333

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1.6e-12  Score=67.11  Aligned_cols=39  Identities=23%  Similarity=0.431  Sum_probs=34.9

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      ++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            578999999999999999999999999999977666654

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=1.8e-12  Score=67.71  Aligned_cols=40  Identities=15%  Similarity=0.280  Sum_probs=35.4

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      ++|+++++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            5789999999999999999999999999999766666654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=8.2e-13  Score=82.12  Aligned_cols=54  Identities=15%  Similarity=0.262  Sum_probs=46.5

Q ss_pred             ccccccccchhhh-hc---CCCCceecCCCCCcCCCHHHHHhh-HHhcCCCCCCCCCcccccccccCCCCceecccc
Q 031966            2 LLTRSNRAKLPIK-KR---LASDVFECKTCNRQFPSFQALGGH-RASHKKPRLINGETKTLSSTTATKPKLHECSIC   73 (150)
Q Consensus         2 ~f~~~~~l~~h~~-~h---~~~~~~~C~~C~k~f~~~~~L~~H-~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~C   73 (150)
                      .|.....|..|++ +|   ++++||.|.+||+.|...+.|..| +++|                  ++++||.|.++
T Consensus        27 ~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~H------------------tgekpy~C~~~   85 (102)
T 2ghf_A           27 QTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYH------------------PGEENFKLTMV   85 (102)
T ss_dssp             EESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTS------------------TTCCCEEEEEC
T ss_pred             ccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhc------------------CCCCCeeCCcc
Confidence            4778889999998 59   678999999999999999999999 8999                  56677777664

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.28  E-value=4.6e-13  Score=73.57  Aligned_cols=51  Identities=14%  Similarity=0.192  Sum_probs=43.6

Q ss_pred             CCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccchhh
Q 031966           28 NRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNE   96 (150)
Q Consensus        28 ~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~   96 (150)
                      +|.|.....|..|+++|                  ++++||.|..||+.|...+.|..|+++|+++++.
T Consensus         3 ~k~~~~~~~l~~h~~~H------------------~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRS------------------QSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHH------------------TSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhc------------------CCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45677777777777777                  7889999999999999999999999999998653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=5e-13  Score=80.96  Aligned_cols=62  Identities=19%  Similarity=0.251  Sum_probs=49.1

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhc
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h   90 (150)
                      .|.++|++++||.|.+|++.|.....|..|+++|                  ++++||.|..|.    ....|..|+++|
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~H------------------t~ekp~~C~~~~----~~~~~~~~~~~~   72 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIH------------------NEEFQKRAKRQE----RRKQLLSKQKYA   72 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHH------------------HHHHHHHCCCCS----CCCCCCCCCCCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHh------------------CCCCCcccchhh----hHHHHHhhhccc
Confidence            3445699999999999999999999999999999                  566777776543    456666777777


Q ss_pred             ccch
Q 031966           91 RIAM   94 (150)
Q Consensus        91 ~~~~   94 (150)
                      .+..
T Consensus        73 ~~~~   76 (88)
T 1x6f_A           73 DGAF   76 (88)
T ss_dssp             CCSS
T ss_pred             cccc
Confidence            7653

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.25  E-value=3.2e-12  Score=66.24  Aligned_cols=41  Identities=29%  Similarity=0.391  Sum_probs=37.0

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      |+++|++++||.|.+||+.|...+.|..|+++|+++++..+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            56778999999999999999999999999999999877654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.24  E-value=4e-12  Score=67.30  Aligned_cols=43  Identities=28%  Similarity=0.458  Sum_probs=38.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|.+++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677889999999999999999999999999999999877654

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.9e-12  Score=66.89  Aligned_cols=43  Identities=23%  Similarity=0.339  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            3667789999999999999999999999999999999877654

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.23  E-value=4.8e-12  Score=66.88  Aligned_cols=43  Identities=26%  Similarity=0.315  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=5.6e-12  Score=66.04  Aligned_cols=42  Identities=24%  Similarity=0.310  Sum_probs=37.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      .|+++|.+++||.|.+|++.|.....|..|+++|+++++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            367778999999999999999999999999999999877554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.9e-12  Score=66.92  Aligned_cols=43  Identities=23%  Similarity=0.394  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..|++.|.....|..|+++|+++++..++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3667789999999999999999999999999999999877664

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5e-12  Score=66.87  Aligned_cols=43  Identities=23%  Similarity=0.320  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            4677889999999999999999999999999999999877654

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=4.9e-12  Score=66.95  Aligned_cols=43  Identities=26%  Similarity=0.345  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3677889999999999999999999999999999999877654

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.2e-12  Score=66.78  Aligned_cols=43  Identities=30%  Similarity=0.419  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            3677789999999999999999999999999999999876654

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.8e-12  Score=65.53  Aligned_cols=41  Identities=22%  Similarity=0.353  Sum_probs=36.8

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      |+++|.+++||.|..||+.|...+.|..|+++|+++++..+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            56778999999999999999999999999999999876543

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=5e-12  Score=66.21  Aligned_cols=42  Identities=21%  Similarity=0.276  Sum_probs=38.0

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      |+++|++++||.|..||+.|...+.|..|+++|+++++..+.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567789999999999999999999999999999999876654

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.3e-12  Score=66.72  Aligned_cols=43  Identities=23%  Similarity=0.331  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.1e-12  Score=66.88  Aligned_cols=43  Identities=26%  Similarity=0.377  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677789999999999999999999999999999999877654

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.8e-12  Score=66.96  Aligned_cols=43  Identities=26%  Similarity=0.486  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.6e-12  Score=67.03  Aligned_cols=43  Identities=30%  Similarity=0.362  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677789999999999999999999999999999999877654

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.23  E-value=5.1e-12  Score=66.81  Aligned_cols=43  Identities=23%  Similarity=0.358  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.6e-12  Score=67.02  Aligned_cols=43  Identities=23%  Similarity=0.291  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            4677889999999999999999999999999999999877654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.23  E-value=4.5e-12  Score=77.20  Aligned_cols=52  Identities=12%  Similarity=0.102  Sum_probs=46.1

Q ss_pred             ccccccccchhhhh-cCCCCc--------eecCCCCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966            2 LLTRSNRAKLPIKK-RLASDV--------FECKTCNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus         2 ~f~~~~~l~~h~~~-h~~~~~--------~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      .|.....|..|+++ |.++++        |.|.+|++.|.....|..|+++|+++++|.|.
T Consensus        34 ~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           34 TFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             ccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            57888899999998 999988        99999999999999999999999766666653

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.23  E-value=5.2e-12  Score=66.83  Aligned_cols=43  Identities=28%  Similarity=0.352  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.3e-12  Score=66.79  Aligned_cols=43  Identities=21%  Similarity=0.383  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            3677789999999999999999999999999999999877654

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.23  E-value=5.5e-12  Score=66.69  Aligned_cols=43  Identities=19%  Similarity=0.215  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4677889999999999999999999999999999999877654

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6.7e-12  Score=66.31  Aligned_cols=43  Identities=26%  Similarity=0.353  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|.+++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677789999999999999999999999999999999876654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6e-12  Score=66.54  Aligned_cols=43  Identities=33%  Similarity=0.461  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            4677789999999999999999999999999999999876654

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.9e-12  Score=66.89  Aligned_cols=43  Identities=26%  Similarity=0.379  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5e-12  Score=66.84  Aligned_cols=43  Identities=21%  Similarity=0.323  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.4e-12  Score=66.71  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|.+++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999998876654

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.2e-12  Score=66.53  Aligned_cols=43  Identities=26%  Similarity=0.344  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..|++.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.7e-12  Score=66.32  Aligned_cols=43  Identities=26%  Similarity=0.393  Sum_probs=38.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677889999999999999999999999999999999877654

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5e-12  Score=66.85  Aligned_cols=43  Identities=23%  Similarity=0.298  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.7e-12  Score=66.65  Aligned_cols=43  Identities=26%  Similarity=0.372  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4677889999999999999999999999999999999877654

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.9e-12  Score=66.89  Aligned_cols=43  Identities=26%  Similarity=0.400  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677789999999999999999999999999999998877654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.22  E-value=6.6e-12  Score=66.41  Aligned_cols=43  Identities=26%  Similarity=0.358  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|.+|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3677889999999999999999999999999999999877654

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.2e-12  Score=66.50  Aligned_cols=43  Identities=23%  Similarity=0.381  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677789999999999999999999999999999999877654

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.4e-12  Score=66.40  Aligned_cols=43  Identities=26%  Similarity=0.328  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            4677789999999999999999999999999999999877654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.4e-12  Score=66.40  Aligned_cols=43  Identities=28%  Similarity=0.388  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            4677889999999999999999999999999999999877654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.5e-12  Score=65.84  Aligned_cols=41  Identities=29%  Similarity=0.367  Sum_probs=37.1

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNES   97 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~   97 (150)
                      .|+++|++++||.|.+|++.|...+.|..|+++|+++++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            36778899999999999999999999999999999987654

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.3e-12  Score=66.45  Aligned_cols=43  Identities=30%  Similarity=0.400  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667789999999999999999999999999999999877654

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.7e-12  Score=66.67  Aligned_cols=42  Identities=24%  Similarity=0.305  Sum_probs=38.1

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++..+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            677789999999999999999999999999999999876653

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.3e-12  Score=66.41  Aligned_cols=43  Identities=28%  Similarity=0.320  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..|++.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.8e-12  Score=66.60  Aligned_cols=43  Identities=23%  Similarity=0.290  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.6e-12  Score=66.38  Aligned_cols=43  Identities=23%  Similarity=0.361  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            3677789999999999999999999999999999999877654

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.3e-12  Score=66.41  Aligned_cols=43  Identities=30%  Similarity=0.347  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.9e-12  Score=66.56  Aligned_cols=43  Identities=23%  Similarity=0.294  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7e-12  Score=65.55  Aligned_cols=42  Identities=29%  Similarity=0.322  Sum_probs=37.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      .|+++|++++||.|..||+.|.....|..|+++|+++++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            367778999999999999999999999999999999877554

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=65.56  Aligned_cols=40  Identities=28%  Similarity=0.345  Sum_probs=36.5

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNES   97 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~   97 (150)
                      |+++|++++||.|.+||+.|.....|..|+++|+++++..
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            6678899999999999999999999999999999987653

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.3e-12  Score=66.41  Aligned_cols=43  Identities=26%  Similarity=0.382  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5e-12  Score=66.85  Aligned_cols=43  Identities=23%  Similarity=0.321  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.1e-12  Score=66.47  Aligned_cols=43  Identities=30%  Similarity=0.426  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.21  E-value=6.8e-12  Score=69.25  Aligned_cols=47  Identities=19%  Similarity=0.313  Sum_probs=43.5

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .|.....|..|+++|+++++|.|..|++.|.....|..|+++|.+++
T Consensus        10 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A           10 RXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             BCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             cCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57888899999999999999999999999999999999999997654

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7e-12  Score=66.29  Aligned_cols=43  Identities=26%  Similarity=0.400  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.9e-12  Score=65.50  Aligned_cols=40  Identities=30%  Similarity=0.384  Sum_probs=36.4

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNES   97 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~   97 (150)
                      |+++|++++||.|.+||+.|...+.|..|+++|+++++..
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            6778899999999999999999999999999999987653

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=8e-12  Score=66.04  Aligned_cols=43  Identities=23%  Similarity=0.282  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677789999999999999999999999999999999877654

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.6e-12  Score=66.38  Aligned_cols=43  Identities=26%  Similarity=0.347  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCC
Confidence            3677789999999999999999999999999999998876654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.4e-12  Score=66.44  Aligned_cols=43  Identities=23%  Similarity=0.253  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|.+++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677789999999999999999999999999999999877654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=8.4e-12  Score=74.45  Aligned_cols=58  Identities=16%  Similarity=0.302  Sum_probs=50.4

Q ss_pred             ccccccccchhhhhcCCC----CceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceecccccccc
Q 031966            2 LLTRSNRAKLPIKKRLAS----DVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEF   77 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~----~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f   77 (150)
                      .|.....|..|+++|.++    ++|.|.+|++.|.....|..|+++|                  .+++++.|..||.+|
T Consensus        24 ~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h------------------~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           24 TFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC------------------AGPDGVEGENSGPSS   85 (86)
T ss_dssp             EESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHC------------------CCCCSCCCCCCCCCC
T ss_pred             ccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHc------------------cCCCCcccCCCCCCC
Confidence            477888999999887765    7999999999999999999999999                  666778888888765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=8.4e-12  Score=66.00  Aligned_cols=43  Identities=21%  Similarity=0.285  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|.....|..|+++|+++++..+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            3667789999999999999999999999999999998876654

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7.1e-12  Score=66.20  Aligned_cols=43  Identities=26%  Similarity=0.356  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|.+++||.|..|++.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            3677789999999999999999999999999999999877654

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.9e-12  Score=66.35  Aligned_cols=43  Identities=26%  Similarity=0.431  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|.+++||.|.+|++.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.20  E-value=8.8e-12  Score=65.85  Aligned_cols=43  Identities=26%  Similarity=0.344  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCC
Confidence            4677789999999999999999999999999999998876654

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.7e-12  Score=65.95  Aligned_cols=42  Identities=26%  Similarity=0.364  Sum_probs=37.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            367778999999999999999999999999999999876554

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=8.5e-12  Score=65.93  Aligned_cols=43  Identities=26%  Similarity=0.332  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            3677789999999999999999999999999999999877654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.20  E-value=1.4e-11  Score=62.83  Aligned_cols=37  Identities=35%  Similarity=0.636  Sum_probs=33.1

Q ss_pred             cCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCC
Q 031966           16 RLASDVFECKTCNRQFPSFQALGGHRASHKKPRLING   52 (150)
Q Consensus        16 h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c   52 (150)
                      |++++||.|.+|++.|...+.|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            6789999999999999999999999999987777754

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=8.3e-12  Score=66.02  Aligned_cols=43  Identities=23%  Similarity=0.402  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677889999999999999999999999999999999877654

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.5e-12  Score=66.11  Aligned_cols=43  Identities=28%  Similarity=0.366  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.9e-12  Score=65.84  Aligned_cols=42  Identities=29%  Similarity=0.286  Sum_probs=37.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            467778999999999999999999999999999999887654

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.4e-12  Score=66.44  Aligned_cols=43  Identities=23%  Similarity=0.303  Sum_probs=38.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677789999999999999999999999999999999877654

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=8.8e-12  Score=65.84  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4677789999999999999999999999999999998876654

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=7.9e-12  Score=66.03  Aligned_cols=43  Identities=28%  Similarity=0.374  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677789999999999999999999999999999999876654

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=8.2e-12  Score=66.04  Aligned_cols=43  Identities=23%  Similarity=0.359  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++..+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3667789999999999999999999999999999999877654

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.20  E-value=8.2e-12  Score=64.62  Aligned_cols=40  Identities=25%  Similarity=0.317  Sum_probs=36.4

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNES   97 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~   97 (150)
                      |+++|++++||.|.+||+.|...+.|..|+++|+++++..
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            6678899999999999999999999999999999987653

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=8.1e-12  Score=66.02  Aligned_cols=43  Identities=23%  Similarity=0.344  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677789999999999999999999999999999999876654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.20  E-value=1.2e-11  Score=62.20  Aligned_cols=37  Identities=24%  Similarity=0.420  Sum_probs=34.0

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      .|+++|++++||.|..|++.|.....|..|+++|.++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            3788999999999999999999999999999999653

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=9.3e-12  Score=65.80  Aligned_cols=43  Identities=23%  Similarity=0.395  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3667779999999999999999999999999999998876654

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.4e-12  Score=66.17  Aligned_cols=42  Identities=26%  Similarity=0.370  Sum_probs=38.2

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      |+++|.+++||.|.+|++.|.....|.+|+++|+++++..+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence            667789999999999999999999999999999999877654

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=6.8e-12  Score=65.02  Aligned_cols=40  Identities=35%  Similarity=0.454  Sum_probs=36.4

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNES   97 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~   97 (150)
                      |+++|++++||.|.+||+.|...+.|..|+++|+++++..
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS   41 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            6678899999999999999999999999999999987653

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1e-11  Score=65.55  Aligned_cols=43  Identities=23%  Similarity=0.368  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            3667789999999999999999999999999999998876654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=8.9e-12  Score=62.69  Aligned_cols=37  Identities=11%  Similarity=0.282  Sum_probs=33.6

Q ss_pred             hhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           13 IKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        13 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      +++|++++||.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            4679999999999999999999999999999977654

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1e-11  Score=65.67  Aligned_cols=42  Identities=26%  Similarity=0.402  Sum_probs=38.0

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++..+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567789999999999999999999999999999999876654

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.1e-11  Score=64.92  Aligned_cols=42  Identities=26%  Similarity=0.359  Sum_probs=37.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      .|+++|.+++||.|..||+.|.....|..|+++|+++++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            366778999999999999999999999999999999877654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.5e-12  Score=66.24  Aligned_cols=42  Identities=24%  Similarity=0.392  Sum_probs=38.2

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      |+++|++++||.|.+|++.|.....|.+|+++|+++++..+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            667789999999999999999999999999999999877654

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1e-11  Score=65.63  Aligned_cols=42  Identities=21%  Similarity=0.343  Sum_probs=38.2

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      |+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            667789999999999999999999999999999999877654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.1e-12  Score=66.30  Aligned_cols=43  Identities=23%  Similarity=0.486  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|.+++||.|.+|++.|.....|..|+++|+++++..+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677789999999999999999999999999999999877654

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.4e-12  Score=66.01  Aligned_cols=43  Identities=28%  Similarity=0.335  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|.+|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            3667889999999999999999999999999999998877654

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9e-12  Score=65.85  Aligned_cols=43  Identities=23%  Similarity=0.381  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            3667789999999999999999999999999999999877654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.19  E-value=2e-12  Score=80.58  Aligned_cols=67  Identities=10%  Similarity=0.040  Sum_probs=58.6

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCccc----------cccc-ccCCCCceec
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKT----------LSST-TATKPKLHEC   70 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~----------~h~~-~h~~~kp~~C   70 (150)
                      .|.....|..|+++|  +++|.|.+|++.|.....|..|++ |.++++|.|....          .|++ .|.++++|.|
T Consensus        25 ~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           25 KLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             BCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             ccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            477788899999998  479999999999999999999996 9999999987621          7886 9999999987


Q ss_pred             c
Q 031966           71 S   71 (150)
Q Consensus        71 ~   71 (150)
                      .
T Consensus       102 ~  102 (107)
T 1wjp_A          102 S  102 (107)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.19  E-value=7e-12  Score=75.37  Aligned_cols=46  Identities=24%  Similarity=0.350  Sum_probs=42.4

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhH-HhcCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHR-ASHKKP   47 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~h~~~   47 (150)
                      .|....+|+.|+++|++++||.|.+|++.|.....|.+|+ +.|.+|
T Consensus        37 ~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           37 SFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             EESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            5888999999999999999999999999999999999996 678654

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.1e-11  Score=65.46  Aligned_cols=43  Identities=26%  Similarity=0.329  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667789999999999999999999999999999999877654

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=9.4e-12  Score=65.81  Aligned_cols=43  Identities=26%  Similarity=0.462  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667789999999999999999999999999999999876654

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.7e-12  Score=66.06  Aligned_cols=43  Identities=26%  Similarity=0.380  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3677789999999999999999999999999999998876654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=8.5e-12  Score=71.89  Aligned_cols=49  Identities=10%  Similarity=0.111  Sum_probs=45.1

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      .|.....|..|+++|+++++|.|.+|++.|.....|..|+++|.++++.
T Consensus        18 ~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A           18 SCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             EESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             ccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            5788889999999999999999999999999999999999999777654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.18  E-value=1.2e-11  Score=62.20  Aligned_cols=36  Identities=28%  Similarity=0.483  Sum_probs=33.3

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      |+++|++++||.|..||+.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            667789999999999999999999999999999874

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.1e-12  Score=65.90  Aligned_cols=42  Identities=24%  Similarity=0.332  Sum_probs=38.1

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      |+++|++++||.|.+||+.|.....|.+|+++|+++++..+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            667789999999999999999999999999999998876654

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.9e-12  Score=65.22  Aligned_cols=42  Identities=26%  Similarity=0.345  Sum_probs=37.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            366778999999999999999999999999999999876553

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.2e-11  Score=65.32  Aligned_cols=42  Identities=24%  Similarity=0.378  Sum_probs=37.7

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhccc-chhhcc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRI-AMNESL   98 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~-~~~~~~   98 (150)
                      .|+++|.+++||.|..||+.|.....|..|+++|++ +++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            367788999999999999999999999999999999 877654

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.18  E-value=1.4e-11  Score=65.13  Aligned_cols=43  Identities=21%  Similarity=0.229  Sum_probs=38.4

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS   44 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3567789999999999999999999999999999998876654

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.7e-12  Score=65.72  Aligned_cols=43  Identities=21%  Similarity=0.287  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence            3677889999999999999999999999999999998876654

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.6e-12  Score=65.69  Aligned_cols=43  Identities=26%  Similarity=0.380  Sum_probs=38.5

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      .|+++|++++||.|..||+.|...+.|..|+++|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677789999999999999999999999999999998876654

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.5e-11  Score=65.00  Aligned_cols=42  Identities=21%  Similarity=0.282  Sum_probs=38.0

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      |+++|.+++||.|.+||+.|.....|..|+++|+++++..+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            567789999999999999999999999999999998876654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=4.2e-11  Score=68.41  Aligned_cols=40  Identities=23%  Similarity=0.202  Sum_probs=34.4

Q ss_pred             hcCCCCceecCC--CCCcCCCHHHHHhhH-HhcCCCCCCCCCc
Q 031966           15 KRLASDVFECKT--CNRQFPSFQALGGHR-ASHKKPRLINGET   54 (150)
Q Consensus        15 ~h~~~~~~~C~~--C~k~f~~~~~L~~H~-~~h~~~k~~~c~~   54 (150)
                      .++|+|||.|..  |+|+|.+.++|.+|+ ++|++++|+.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            468999999975  999999999999997 7898888777643

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.6e-11  Score=61.74  Aligned_cols=35  Identities=11%  Similarity=0.476  Sum_probs=32.6

Q ss_pred             cccCCCCceeccccccccccchHHHHHhHhcccch
Q 031966           60 TTATKPKLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        60 ~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      ++|++++||.|..||+.|...+.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            46799999999999999999999999999999875

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.6e-11  Score=64.24  Aligned_cols=41  Identities=24%  Similarity=0.316  Sum_probs=37.0

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      |+++|.+++||.|.+||+.|.....|..|+++|+++++..+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            56778999999999999999999999999999999877654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.14  E-value=3e-11  Score=74.16  Aligned_cols=48  Identities=19%  Similarity=0.311  Sum_probs=42.8

Q ss_pred             cc-ccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhh-HHhcCCCCCC
Q 031966            2 LL-TRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGH-RASHKKPRLI   50 (150)
Q Consensus         2 ~f-~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H-~~~h~~~k~~   50 (150)
                      .| .....|+.|+++| ++++|.|.+|++.|.....|..| +++|+++..+
T Consensus        43 ~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           43 VGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             CEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            47 7888999999999 99999999999999999999999 9999654433

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2e-11  Score=64.71  Aligned_cols=43  Identities=28%  Similarity=0.350  Sum_probs=38.3

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhH-hcccchhhccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMR-RHRIAMNESLN   99 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~-~h~~~~~~~~~   99 (150)
                      .|+++|.+++||.|.+||+.|...+.|..|++ +|+++++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            36777899999999999999999999999999 99998876654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.13  E-value=5e-11  Score=59.00  Aligned_cols=35  Identities=20%  Similarity=0.254  Sum_probs=31.9

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      +|+++++|.|.+|++.|...+.|..|+++|.+++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999977654

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3.5e-11  Score=63.57  Aligned_cols=42  Identities=24%  Similarity=0.327  Sum_probs=37.7

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      ++++|.+++||.|.+|++.|.....|..|+++|+++++..++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            356779999999999999999999999999999999887664

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.11  E-value=5.7e-11  Score=58.88  Aligned_cols=35  Identities=17%  Similarity=0.282  Sum_probs=31.9

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      +|++++||.|.+|++.|...+.|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47899999999999999999999999999977653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.10  E-value=4.3e-11  Score=59.22  Aligned_cols=34  Identities=21%  Similarity=0.335  Sum_probs=31.5

Q ss_pred             ccCCCCceeccccccccccchHHHHHhHhcccch
Q 031966           61 TATKPKLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        61 ~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      +|.+++||.|..||+.|...+.|..|+++|++++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            3688999999999999999999999999999875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.5e-11  Score=63.24  Aligned_cols=41  Identities=29%  Similarity=0.414  Sum_probs=36.7

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      +.++|.+++||.|.+|++.|.....|..|+++|+++++..+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            44677999999999999999999999999999999887654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.10  E-value=4.7e-11  Score=59.19  Aligned_cols=34  Identities=18%  Similarity=0.384  Sum_probs=31.5

Q ss_pred             ccCCCCceeccccccccccchHHHHHhHhcccch
Q 031966           61 TATKPKLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        61 ~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      +|++++||.|.+||+.|...+.|..|+++|++++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            3689999999999999999999999999999875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=2.9e-11  Score=70.03  Aligned_cols=47  Identities=17%  Similarity=0.312  Sum_probs=43.3

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .|.....|..|+++|.++++|.|.+|++.|.....|..|+++|.++.
T Consensus        23 ~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           23 AFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             EESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            57888899999999999999999999999999999999999996553

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.8e-11  Score=61.39  Aligned_cols=38  Identities=26%  Similarity=0.405  Sum_probs=34.4

Q ss_pred             cccCCCCceeccccccccccchHHHHHhHhcccchhhc
Q 031966           60 TTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNES   97 (150)
Q Consensus        60 ~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~   97 (150)
                      ++|++++||.|.+||+.|.....|..|+++|+++++..
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            46789999999999999999999999999999987653

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.6e-11  Score=63.02  Aligned_cols=42  Identities=26%  Similarity=0.422  Sum_probs=37.6

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      ++++|++++||.|.+|++.|.....|..|+++|+++++..+.
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCC
Confidence            456789999999999999999999999999999998876654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.08  E-value=3e-11  Score=66.59  Aligned_cols=44  Identities=11%  Similarity=0.299  Sum_probs=41.4

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHK   45 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~   45 (150)
                      .|.....|..|+++|++++||.|.+|++.|.....|..|+++|.
T Consensus        13 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C           13 FFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             BCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             hhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            57888899999999999999999999999999999999999874

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1.6e-11  Score=75.56  Aligned_cols=50  Identities=18%  Similarity=0.294  Sum_probs=46.0

Q ss_pred             ccc-cccccchhhhhcCC-CCceecCCCCCcCCCHHHHHhhHHhcCCCCCCC
Q 031966            2 LLT-RSNRAKLPIKKRLA-SDVFECKTCNRQFPSFQALGGHRASHKKPRLIN   51 (150)
Q Consensus         2 ~f~-~~~~l~~h~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~   51 (150)
                      .|. ....|+.|+++|++ +++|.|.+|++.|.....|..|+++|.++++..
T Consensus        33 ~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           33 VTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             ChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            477 88899999999999 999999999999999999999999998887754

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.06  E-value=7.9e-11  Score=61.31  Aligned_cols=39  Identities=13%  Similarity=0.190  Sum_probs=35.6

Q ss_pred             cccCCCCceeccccccccccchHHHHHhHhcccchhhcc
Q 031966           60 TTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESL   98 (150)
Q Consensus        60 ~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~   98 (150)
                      ++|++++||.|..|++.|.....|..|+++|+++++..+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            467899999999999999999999999999999987655

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=9e-11  Score=59.72  Aligned_cols=32  Identities=19%  Similarity=0.333  Sum_probs=29.9

Q ss_pred             cCCCCceeccc--cccccccchHHHHHhHhcccc
Q 031966           62 ATKPKLHECSI--CGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        62 h~~~kp~~C~~--Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      +++++||.|.+  |+++|...+.|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            58899999986  999999999999999999986

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=8.9e-11  Score=59.09  Aligned_cols=34  Identities=21%  Similarity=0.357  Sum_probs=31.3

Q ss_pred             cccCCCCceeccccccccccchHHHHH-hHhcccc
Q 031966           60 TTATKPKLHECSICGQEFAMGQALGGH-MRRHRIA   93 (150)
Q Consensus        60 ~~h~~~kp~~C~~Cgk~f~~~~~l~~H-~~~h~~~   93 (150)
                      ++|++++||.|..||+.|...+.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467999999999999999999999999 8999875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=7.4e-11  Score=65.69  Aligned_cols=46  Identities=22%  Similarity=0.358  Sum_probs=42.1

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhH-HhcCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHR-ASHKKP   47 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~h~~~   47 (150)
                      .|.....|..|+++|+++++|.|..|++.|.....|..|+ ++|.++
T Consensus        11 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A           11 AFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             ccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            5788899999999999999999999999999999999996 788654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.5e-11  Score=62.76  Aligned_cols=41  Identities=22%  Similarity=0.332  Sum_probs=37.0

Q ss_pred             ccccCCCCceeccccccccccchHHHHHhHhcccchhhccc
Q 031966           59 STTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        59 ~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      +++|.+++||.|.+|++.|.....|..|+++|+++++..+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            46779999999999999999999999999999998876654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.04  E-value=9.8e-11  Score=59.55  Aligned_cols=36  Identities=42%  Similarity=0.668  Sum_probs=32.6

Q ss_pred             cCCCCceeccccccccccchHHHHHhHhcccchhhc
Q 031966           62 ATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNES   97 (150)
Q Consensus        62 h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~   97 (150)
                      |++++||.|.+||+.|...+.|..|+++|+++++..
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            478899999999999999999999999999988754

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=9.6e-11  Score=58.95  Aligned_cols=35  Identities=14%  Similarity=0.241  Sum_probs=31.9

Q ss_pred             hhhcCCCCceecCCCCCcCCCHHHHHhh-HHhcCCC
Q 031966           13 IKKRLASDVFECKTCNRQFPSFQALGGH-RASHKKP   47 (150)
Q Consensus        13 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H-~~~h~~~   47 (150)
                      |++|++++||.|..|++.|...+.|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            4679999999999999999999999999 8999653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=99.04  E-value=8.6e-11  Score=62.79  Aligned_cols=36  Identities=22%  Similarity=0.408  Sum_probs=29.9

Q ss_pred             ccCCCCceeccccccccccchHHHHHhH-hcccchhh
Q 031966           61 TATKPKLHECSICGQEFAMGQALGGHMR-RHRIAMNE   96 (150)
Q Consensus        61 ~h~~~kp~~C~~Cgk~f~~~~~l~~H~~-~h~~~~~~   96 (150)
                      +|++++||.|.+||+.|.....|..|++ +|+++...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            4689999999999999999999999999 99987654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.1e-10  Score=58.52  Aligned_cols=34  Identities=18%  Similarity=0.373  Sum_probs=31.4

Q ss_pred             cccCCCCceeccccccccccc-hHHHHHhHhcccc
Q 031966           60 TTATKPKLHECSICGQEFAMG-QALGGHMRRHRIA   93 (150)
Q Consensus        60 ~~h~~~kp~~C~~Cgk~f~~~-~~l~~H~~~h~~~   93 (150)
                      ++|++++||.|..|++.|... +.|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            457899999999999999999 9999999999876

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.03  E-value=6.7e-11  Score=73.86  Aligned_cols=53  Identities=17%  Similarity=0.302  Sum_probs=50.1

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCc
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRLINGET   54 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~   54 (150)
                      .|.....|..|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|..
T Consensus        18 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   70 (110)
T 2csh_A           18 SFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI   70 (110)
T ss_dssp             EESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSS
T ss_pred             ccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCC
Confidence            47788899999999999999999999999999999999999999999999876

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2.3e-10  Score=58.16  Aligned_cols=33  Identities=21%  Similarity=0.355  Sum_probs=30.1

Q ss_pred             hcCCCCceecCC--CCCcCCCHHHHHhhHHhcCCC
Q 031966           15 KRLASDVFECKT--CNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        15 ~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      .+++++||.|.+  |++.|...+.|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            468999999986  999999999999999999765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.6e-10  Score=57.50  Aligned_cols=34  Identities=24%  Similarity=0.391  Sum_probs=31.4

Q ss_pred             ccCCCCceeccccccccccchHHHHHhHhcccch
Q 031966           61 TATKPKLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        61 ~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      +|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5689999999999999999999999999998763

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=1.6e-10  Score=60.67  Aligned_cols=41  Identities=24%  Similarity=0.425  Sum_probs=36.7

Q ss_pred             cccCCCCceeccccccccccchHHHHHhHhcccchhhcccc
Q 031966           60 TTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNS  100 (150)
Q Consensus        60 ~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  100 (150)
                      ..|++++||.|.+|++.|.....|..|+++|+++++..+..
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~   43 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS   43 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcC
Confidence            45789999999999999999999999999999998776544

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.8e-10  Score=57.40  Aligned_cols=33  Identities=27%  Similarity=0.486  Sum_probs=31.0

Q ss_pred             ccCCCCceeccccccccccchHHHHHhHhcccc
Q 031966           61 TATKPKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        61 ~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      .|.+++||.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            568999999999999999999999999999876

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.5e-10  Score=57.71  Aligned_cols=33  Identities=24%  Similarity=0.391  Sum_probs=30.8

Q ss_pred             ccCCCCceeccccccccccchHHHHHhHhcccc
Q 031966           61 TATKPKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        61 ~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      .|++++||.|..|++.|...+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            468899999999999999999999999999876

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.3e-10  Score=56.98  Aligned_cols=35  Identities=17%  Similarity=0.363  Sum_probs=31.6

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      +.|++++||.|.+|++.|...+.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            36889999999999999999999999999997653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=3e-10  Score=56.55  Aligned_cols=35  Identities=20%  Similarity=0.358  Sum_probs=31.7

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      +.|++++||.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            36899999999999999999999999999997653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=9.2e-11  Score=67.91  Aligned_cols=44  Identities=25%  Similarity=0.483  Sum_probs=41.1

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHK   45 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~   45 (150)
                      .|.....|..|+++|.++++|.|.+|++.|.....|..|+++|+
T Consensus        30 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           30 RFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             EESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            47788899999999999999999999999999999999999883

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=2.9e-10  Score=64.97  Aligned_cols=40  Identities=18%  Similarity=0.185  Sum_probs=34.8

Q ss_pred             cCCCCceeccc--cccccccchHHHHHh-Hhcccchhhccccc
Q 031966           62 ATKPKLHECSI--CGQEFAMGQALGGHM-RRHRIAMNESLNSA  101 (150)
Q Consensus        62 h~~~kp~~C~~--Cgk~f~~~~~l~~H~-~~h~~~~~~~~~~~  101 (150)
                      ++++|||.|..  ||++|...++|.+|+ ++|+++++..+...
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            48999999975  999999999999997 68999998876543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.6e-10  Score=57.98  Aligned_cols=35  Identities=17%  Similarity=0.293  Sum_probs=31.8

Q ss_pred             hhcCCCCceecCCCCCcCCCH-HHHHhhHHhcCCCC
Q 031966           14 KKRLASDVFECKTCNRQFPSF-QALGGHRASHKKPR   48 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~-~~L~~H~~~h~~~k   48 (150)
                      ++|++++||.|.+|++.|... +.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            578999999999999999999 99999999997653

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=2.6e-10  Score=57.50  Aligned_cols=35  Identities=20%  Similarity=0.389  Sum_probs=31.9

Q ss_pred             cCCCCceecC--CCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           16 RLASDVFECK--TCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        16 h~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      |++++||.|.  .|++.|...+.|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6799999999  5999999999999999999777765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.98  E-value=4.7e-10  Score=54.95  Aligned_cols=32  Identities=22%  Similarity=0.333  Sum_probs=29.0

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCCCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPRLIN   51 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~   51 (150)
                      +||.|.+||+.|...+.|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999997777764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3.4e-10  Score=56.28  Aligned_cols=35  Identities=14%  Similarity=0.272  Sum_probs=31.7

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .+|++++||.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            36889999999999999999999999999997653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3e-10  Score=56.50  Aligned_cols=34  Identities=26%  Similarity=0.499  Sum_probs=31.2

Q ss_pred             ccCCCCceeccccccccccchHHHHHhHhcccch
Q 031966           61 TATKPKLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        61 ~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      .|.+++||.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4688999999999999999999999999998863

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=6.1e-10  Score=55.32  Aligned_cols=34  Identities=21%  Similarity=0.405  Sum_probs=31.2

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .|+++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999997653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.95  E-value=3.9e-10  Score=60.16  Aligned_cols=35  Identities=20%  Similarity=0.371  Sum_probs=29.8

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHH-hcCCCCC
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRA-SHKKPRL   49 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~k~   49 (150)
                      +|++++||.|.+|++.|....+|..|++ +|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5899999999999999999999999999 9976543

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.9e-10  Score=59.81  Aligned_cols=42  Identities=26%  Similarity=0.400  Sum_probs=37.4

Q ss_pred             cccccCCCCceecc--ccccccccchHHHHHhHhcccchhhccc
Q 031966           58 SSTTATKPKLHECS--ICGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        58 h~~~h~~~kp~~C~--~Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      |.++|++++||.|.  .|++.|.....|..|+++|+++++..+.
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   46 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS   46 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45678999999998  8999999999999999999998877654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=4.3e-10  Score=55.97  Aligned_cols=34  Identities=24%  Similarity=0.549  Sum_probs=31.0

Q ss_pred             ccCCCCceeccccccccccchHHHHHhHhcccch
Q 031966           61 TATKPKLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        61 ~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      .|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4578999999999999999999999999998763

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.91  E-value=3e-10  Score=60.29  Aligned_cols=41  Identities=22%  Similarity=0.404  Sum_probs=35.5

Q ss_pred             ccchhhhhcCCCCceecC--CCCCcCCCHHHHHhhHHhcCCCC
Q 031966            8 RAKLPIKKRLASDVFECK--TCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus         8 ~l~~h~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .+..|+..|++++||.|.  .|++.|...++|..|+++|++++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            455666789999999996  79999999999999999997653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1e-09  Score=54.54  Aligned_cols=34  Identities=24%  Similarity=0.519  Sum_probs=30.9

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .|++++||.|..|++.|.....|..|+++|.+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4788999999999999999999999999997653

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=1.6e-09  Score=68.01  Aligned_cols=52  Identities=8%  Similarity=0.114  Sum_probs=25.8

Q ss_pred             cccccccchhhhh--cCCCCcee-cCCCCCcC--CCHHHHHhhHHhcCCCCCCCCCc
Q 031966            3 LTRSNRAKLPIKK--RLASDVFE-CKTCNRQF--PSFQALGGHRASHKKPRLINGET   54 (150)
Q Consensus         3 f~~~~~l~~h~~~--h~~~~~~~-C~~C~k~f--~~~~~L~~H~~~h~~~k~~~c~~   54 (150)
                      |.....|..|+++  |.+++++. |.+|++.|  .....|..|+++|.++++|.|..
T Consensus        29 f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~   85 (115)
T 2dmi_A           29 YDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMY   85 (115)
T ss_dssp             ESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSS
T ss_pred             hcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCC
Confidence            4444455555554  44444333 55555555  45555555555555555555443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=7.9e-10  Score=55.66  Aligned_cols=35  Identities=26%  Similarity=0.489  Sum_probs=31.5

Q ss_pred             cCCCCceecc--ccccccccchHHHHHhHhcccchhh
Q 031966           62 ATKPKLHECS--ICGQEFAMGQALGGHMRRHRIAMNE   96 (150)
Q Consensus        62 h~~~kp~~C~--~Cgk~f~~~~~l~~H~~~h~~~~~~   96 (150)
                      |++++||.|.  .||+.|...+.|.+|+++|+++++.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4789999999  5999999999999999999988653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.89  E-value=6.9e-10  Score=62.85  Aligned_cols=45  Identities=16%  Similarity=0.228  Sum_probs=40.8

Q ss_pred             ccccccccchhhhh-c-CCCCceecCCCCCcCCCHHHHHhhHHhcCC
Q 031966            2 LLTRSNRAKLPIKK-R-LASDVFECKTCNRQFPSFQALGGHRASHKK   46 (150)
Q Consensus         2 ~f~~~~~l~~h~~~-h-~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   46 (150)
                      .|.....|..|+++ | .++++|.|..|++.|...+.|..|+++|.+
T Consensus        19 ~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           19 VYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             hhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            47888899999998 7 699999999999999999999999998743

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=4.8e-10  Score=65.69  Aligned_cols=49  Identities=20%  Similarity=0.350  Sum_probs=42.9

Q ss_pred             ccccccccchhhhhcCC---CCceecCCCCCcCCCHHHHHhhH-HhcCCCCCC
Q 031966            2 LLTRSNRAKLPIKKRLA---SDVFECKTCNRQFPSFQALGGHR-ASHKKPRLI   50 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~---~~~~~C~~C~k~f~~~~~L~~H~-~~h~~~k~~   50 (150)
                      .|.....|..|+++|.+   +++|.|.+|++.|.....|..|+ +.|.++++.
T Consensus        16 ~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A           16 TCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             EESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             eeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            57888999999999996   89999999999999999999999 567655543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.88  E-value=4.8e-10  Score=64.66  Aligned_cols=43  Identities=26%  Similarity=0.494  Sum_probs=39.5

Q ss_pred             ccccccccchhhhhcCCCCceecCC--CCCcCCCHHHHHhhHHhc
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKT--CNRQFPSFQALGGHRASH   44 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h   44 (150)
                      .|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|
T Consensus        28 ~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           28 TYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             EESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4778889999999999999999965  999999999999999876

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=3.8e-09  Score=60.19  Aligned_cols=36  Identities=22%  Similarity=0.428  Sum_probs=32.2

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCCC
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      ..|.+++||.|.+|+|.|...+.|..|+++|+++..
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            347889999999999999999999999999987643

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.87  E-value=7.6e-10  Score=58.69  Aligned_cols=37  Identities=19%  Similarity=0.285  Sum_probs=32.4

Q ss_pred             cccccCCCCceecc--ccccccccchHHHHHhHhcccch
Q 031966           58 SSTTATKPKLHECS--ICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        58 h~~~h~~~kp~~C~--~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      +...|++++||.|.  .||+.|...+.|..|+++|++++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34567999999996  79999999999999999999863

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.3e-09  Score=57.96  Aligned_cols=41  Identities=24%  Similarity=0.284  Sum_probs=36.7

Q ss_pred             ccCCCCceeccccccccccchHHHHHhHhcccchhhccccc
Q 031966           61 TATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSA  101 (150)
Q Consensus        61 ~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~  101 (150)
                      .|.++++|.|.+|++.|.....|..|+++|+++++..+..+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS   46 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCC
Confidence            45788999999999999999999999999999988776554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.85  E-value=9.2e-10  Score=53.86  Aligned_cols=31  Identities=23%  Similarity=0.433  Sum_probs=28.7

Q ss_pred             CceeccccccccccchHHHHHhHhcccchhh
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIAMNE   96 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~   96 (150)
                      +||.|.+||+.|...+.|..|+++|+++++.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5899999999999999999999999998764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.85  E-value=1.2e-09  Score=54.80  Aligned_cols=33  Identities=33%  Similarity=0.578  Sum_probs=30.1

Q ss_pred             cCCCCceeccc--cccccccchHHHHHhHhcccch
Q 031966           62 ATKPKLHECSI--CGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        62 h~~~kp~~C~~--Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      |++++||.|.+  ||+.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            58899999984  9999999999999999998863

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.83  E-value=1.9e-09  Score=54.05  Aligned_cols=34  Identities=18%  Similarity=0.287  Sum_probs=30.4

Q ss_pred             hcCCCCceecCC--CCCcCCCHHHHHhhHHhcCCCC
Q 031966           15 KRLASDVFECKT--CNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        15 ~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .|++++||.|.+  |++.|...+.|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478999999994  9999999999999999997653

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=6e-10  Score=63.30  Aligned_cols=46  Identities=13%  Similarity=0.115  Sum_probs=40.8

Q ss_pred             ccccccccchhhhhcCCCCceecC-CCCCcCCCHHHHHhhHHhcCCCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECK-TCNRQFPSFQALGGHRASHKKPRL   49 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~-~C~k~f~~~~~L~~H~~~h~~~k~   49 (150)
                      .|. ...|..|+++ ++++||.|. .||+.|...+.|..|+++|...++
T Consensus        19 ~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           19 EFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             EEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             ccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            467 7889999999 999999999 999999999999999999955443

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.82  E-value=3e-09  Score=57.98  Aligned_cols=47  Identities=21%  Similarity=0.334  Sum_probs=40.5

Q ss_pred             cccCCCCceeccccccccccchHHHHHhH-hcccchhhcccccccccC
Q 031966           60 TTATKPKLHECSICGQEFAMGQALGGHMR-RHRIAMNESLNSAVIVSQ  106 (150)
Q Consensus        60 ~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~-~h~~~~~~~~~~~~~~~~  106 (150)
                      ..|.+++||.|.+|++.|.....|.+|++ +|.++++..+..+.....
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            35688999999999999999999999997 899999888877665443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.81  E-value=1.7e-09  Score=54.23  Aligned_cols=26  Identities=31%  Similarity=0.528  Sum_probs=24.8

Q ss_pred             cCCCCceecCCCCCcCCCHHHHHhhH
Q 031966           16 RLASDVFECKTCNRQFPSFQALGGHR   41 (150)
Q Consensus        16 h~~~~~~~C~~C~k~f~~~~~L~~H~   41 (150)
                      +.||+||.|.+|||+|.+.++|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            57899999999999999999999998

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=4e-09  Score=60.11  Aligned_cols=35  Identities=20%  Similarity=0.492  Sum_probs=31.8

Q ss_pred             cccCCCCceeccccccccccchHHHHHhHhcccch
Q 031966           60 TTATKPKLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        60 ~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      ..+.+++||.|.+|++.|.....|.+|+++|+++.
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            34688999999999999999999999999999864

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.78  E-value=3.2e-10  Score=55.15  Aligned_cols=31  Identities=23%  Similarity=0.379  Sum_probs=28.1

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      +||.|.+||+.|...+.|..|+++|+++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999777665

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.77  E-value=2.9e-09  Score=50.25  Aligned_cols=29  Identities=24%  Similarity=0.471  Sum_probs=27.1

Q ss_pred             CCceeccccccccccchHHHHHhHhcccc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      ++||.|..||+.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            47999999999999999999999999876

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.77  E-value=3.2e-09  Score=49.84  Aligned_cols=28  Identities=21%  Similarity=0.330  Sum_probs=26.4

Q ss_pred             CceeccccccccccchHHHHHhHhcccc
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      +||.|..||+.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.76  E-value=3.7e-09  Score=59.36  Aligned_cols=51  Identities=10%  Similarity=0.065  Sum_probs=42.0

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhcccccccccCCCCc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVIVSQSPPV  110 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~  110 (150)
                      .|+++|++++||.|+.||+.|.....|.   ++|+++++..+..+.........
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            3667779999999999999999988886   78999999988887766554443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.76  E-value=5.2e-09  Score=61.05  Aligned_cols=54  Identities=20%  Similarity=0.207  Sum_probs=43.9

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhH-hcccc-hhhcccccccccCCCCc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMR-RHRIA-MNESLNSAVIVSQSPPV  110 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~-~h~~~-~~~~~~~~~~~~~~~~~  110 (150)
                      .|+++|++++||.|.+|++.|.....|..|++ .|.++ ++..+..+.........
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~   60 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD   60 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHH
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHH
Confidence            46677799999999999999999999999997 68775 67888777766555433

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=8.2e-09  Score=62.22  Aligned_cols=46  Identities=13%  Similarity=0.270  Sum_probs=40.1

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhcccccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAV  102 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~  102 (150)
                      .+.++|++++||.|.+|++.|.....|..|+++|+++++..+....
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE   60 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh
Confidence            3456679999999999999999999999999999999988875543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.74  E-value=3.8e-10  Score=54.86  Aligned_cols=31  Identities=23%  Similarity=0.439  Sum_probs=28.5

Q ss_pred             CceeccccccccccchHHHHHhHhcccchhh
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIAMNE   96 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~   96 (150)
                      +||.|.+||+.|...+.|..|+++|+++++.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999998753

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.74  E-value=8.2e-09  Score=48.62  Aligned_cols=30  Identities=20%  Similarity=0.484  Sum_probs=27.2

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      ++||.|..|++.|.....|..|+++|.+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            579999999999999999999999997653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.74  E-value=4e-09  Score=49.20  Aligned_cols=28  Identities=29%  Similarity=0.647  Sum_probs=25.9

Q ss_pred             CCceeccccccccccchHHHHHhHhccc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      ++||.|.+||+.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4799999999999999999999999874

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.74  E-value=4.9e-09  Score=48.51  Aligned_cols=27  Identities=33%  Similarity=0.493  Sum_probs=25.2

Q ss_pred             CCceeccccccccccchHHHHHhHhcc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      ++||.|..||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999885

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.73  E-value=3.7e-09  Score=49.09  Aligned_cols=27  Identities=22%  Similarity=0.454  Sum_probs=25.0

Q ss_pred             CCceeccccccccccchHHHHHhHhcc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      ++||.|..||+.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999884

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.73  E-value=4.7e-09  Score=49.20  Aligned_cols=28  Identities=29%  Similarity=0.573  Sum_probs=26.2

Q ss_pred             CceeccccccccccchHHHHHhHhcccc
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      +||.|..||+.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999876

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.71  E-value=6.9e-09  Score=49.97  Aligned_cols=30  Identities=20%  Similarity=0.382  Sum_probs=27.3

Q ss_pred             CCceecc--ccccccccchHHHHHhHhcccch
Q 031966           65 PKLHECS--ICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        65 ~kp~~C~--~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      ++||.|.  .||+.|...+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4799999  89999999999999999998763

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.71  E-value=5.2e-09  Score=48.96  Aligned_cols=29  Identities=28%  Similarity=0.509  Sum_probs=26.7

Q ss_pred             CceeccccccccccchHHHHHhHhcccch
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      +||.|..||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999998763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.70  E-value=5.3e-09  Score=48.98  Aligned_cols=29  Identities=28%  Similarity=0.516  Sum_probs=26.7

Q ss_pred             CceeccccccccccchHHHHHhHhcccch
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      +||.|.+||+.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999998763

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.70  E-value=7.8e-09  Score=66.14  Aligned_cols=44  Identities=18%  Similarity=0.268  Sum_probs=40.6

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      .|.....|..|+++|  ++||.|.+|++.|...+.|..|+++|.+.
T Consensus        83 ~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           83 PFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             EESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             ccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            477888999999999  89999999999999999999999999654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.14  E-value=2e-09  Score=50.98  Aligned_cols=29  Identities=34%  Similarity=0.403  Sum_probs=26.9

Q ss_pred             CCceeccccccccccchHHHHHhHhcccc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      ++||.|..||+.|...+.|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            47899999999999999999999999876

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.68  E-value=1.6e-08  Score=47.28  Aligned_cols=28  Identities=32%  Similarity=0.625  Sum_probs=25.9

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      +||.|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.68  E-value=7.2e-09  Score=51.88  Aligned_cols=27  Identities=30%  Similarity=0.502  Sum_probs=25.1

Q ss_pred             cCCCCceeccccccccccchHHHHHhH
Q 031966           62 ATKPKLHECSICGQEFAMGQALGGHMR   88 (150)
Q Consensus        62 h~~~kp~~C~~Cgk~f~~~~~l~~H~~   88 (150)
                      +.+++||.|.+|||+|++.++|.+|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCC
Confidence            478999999999999999999999983

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=2.1e-09  Score=50.63  Aligned_cols=29  Identities=31%  Similarity=0.644  Sum_probs=26.6

Q ss_pred             CceeccccccccccchHHHHHhHhcccch
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      +||.|..||+.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999998763

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.67  E-value=8.6e-09  Score=48.56  Aligned_cols=29  Identities=21%  Similarity=0.319  Sum_probs=26.7

Q ss_pred             CceeccccccccccchHHHHHhHhcccch
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      +||.|.+||+.|...+.|..|+++|+++.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            57999999999999999999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.67  E-value=1e-08  Score=47.99  Aligned_cols=29  Identities=24%  Similarity=0.446  Sum_probs=26.3

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      +||.|..|++.|...+.|..|+++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999997653

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.66  E-value=9.2e-09  Score=47.40  Aligned_cols=27  Identities=30%  Similarity=0.602  Sum_probs=24.0

Q ss_pred             ceeccccccccccchHHHHHhHhcccc
Q 031966           67 LHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      ||.|..||+.|...+.|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            689999999999999999999999864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.66  E-value=1.7e-08  Score=48.48  Aligned_cols=30  Identities=23%  Similarity=0.557  Sum_probs=27.1

Q ss_pred             CCceecC--CCCCcCCCHHHHHhhHHhcCCCC
Q 031966           19 SDVFECK--TCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        19 ~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      ++||.|.  .|++.|...+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            5799999  89999999999999999997653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.66  E-value=8.2e-09  Score=49.35  Aligned_cols=29  Identities=28%  Similarity=0.561  Sum_probs=26.5

Q ss_pred             Cceecc--ccccccccchHHHHHhHhcccch
Q 031966           66 KLHECS--ICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        66 kp~~C~--~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      +||.|.  .||+.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  89999999999999999999863

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.64  E-value=2e-08  Score=46.66  Aligned_cols=28  Identities=18%  Similarity=0.489  Sum_probs=25.6

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCC
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKK   46 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~   46 (150)
                      ++||.|.+|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            5799999999999999999999998853

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.63  E-value=2.6e-08  Score=47.51  Aligned_cols=29  Identities=24%  Similarity=0.604  Sum_probs=26.2

Q ss_pred             CceecC--CCCCcCCCHHHHHhhHHhcCCCC
Q 031966           20 DVFECK--TCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        20 ~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      +||.|.  .||+.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999997653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.63  E-value=2.2e-08  Score=46.17  Aligned_cols=27  Identities=26%  Similarity=0.576  Sum_probs=25.1

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcC
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHK   45 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~   45 (150)
                      ++||.|..||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            579999999999999999999999883

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.62  E-value=1.5e-08  Score=46.89  Aligned_cols=26  Identities=23%  Similarity=0.623  Sum_probs=24.6

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhc
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      ++||.|..||+.|...+.|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            57999999999999999999999987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=6.3e-10  Score=64.02  Aligned_cols=39  Identities=13%  Similarity=0.221  Sum_probs=31.7

Q ss_pred             cccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966            3 LTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus         3 f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      |.....|..       +++|.|.+|++.|.....|..|+++|.+++
T Consensus        28 f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~   66 (73)
T 2ctu_A           28 FIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKK   66 (73)
T ss_dssp             EECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCC
T ss_pred             hCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCC
Confidence            555566655       789999999999999999999999884433

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.62  E-value=1.3e-08  Score=48.09  Aligned_cols=29  Identities=24%  Similarity=0.462  Sum_probs=26.2

Q ss_pred             CceeccccccccccchHHHHH-hHhcccch
Q 031966           66 KLHECSICGQEFAMGQALGGH-MRRHRIAM   94 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H-~~~h~~~~   94 (150)
                      +||.|..||+.|...+.|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            589999999999999999999 78998763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.61  E-value=1.8e-08  Score=47.03  Aligned_cols=29  Identities=24%  Similarity=0.551  Sum_probs=26.3

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      +||.|.+|++.|.....|..|+++|.+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999997653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.59  E-value=3.1e-08  Score=46.52  Aligned_cols=29  Identities=14%  Similarity=0.367  Sum_probs=26.3

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      ++|.|.+|++.|...+.|..|+++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            57999999999999999999999997654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.59  E-value=2e-08  Score=46.82  Aligned_cols=28  Identities=21%  Similarity=0.490  Sum_probs=25.8

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5899999999999999999999999665

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.00  E-value=6.4e-09  Score=47.67  Aligned_cols=26  Identities=35%  Similarity=0.731  Sum_probs=24.2

Q ss_pred             CceeccccccccccchHHHHHhHhcc
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      +||.|.+||+.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999874

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=6.5e-09  Score=49.11  Aligned_cols=29  Identities=31%  Similarity=0.492  Sum_probs=26.4

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      ++||.|..|++.|.....|..|+++|.++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            47899999999999999999999999664

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.98  E-value=7e-09  Score=48.73  Aligned_cols=28  Identities=21%  Similarity=0.449  Sum_probs=25.7

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      +||.|..|++.|...+.|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5899999999999999999999999665

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.55  E-value=5.2e-08  Score=44.73  Aligned_cols=26  Identities=35%  Similarity=0.730  Sum_probs=23.6

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhcCC
Q 031966           21 VFECKTCNRQFPSFQALGGHRASHKK   46 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h~~   46 (150)
                      ||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            68999999999999999999999965

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.53  E-value=4.7e-08  Score=46.03  Aligned_cols=28  Identities=29%  Similarity=0.547  Sum_probs=25.5

Q ss_pred             CceecCCCCCcCCCHHHHHhh-HHhcCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGH-RASHKKP   47 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H-~~~h~~~   47 (150)
                      +||.|..|++.|...+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            589999999999999999999 7899765

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.45  E-value=8.2e-08  Score=44.72  Aligned_cols=27  Identities=26%  Similarity=0.470  Sum_probs=25.0

Q ss_pred             Cceecc--ccccccccchHHHHHhHhccc
Q 031966           66 KLHECS--ICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        66 kp~~C~--~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      +||.|.  .||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            589999  999999999999999999874

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=2.9e-08  Score=45.33  Aligned_cols=25  Identities=24%  Similarity=0.624  Sum_probs=23.6

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhc
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      +||.|.+||+.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            5899999999999999999999887

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.29  E-value=3.8e-07  Score=42.32  Aligned_cols=27  Identities=30%  Similarity=0.647  Sum_probs=24.7

Q ss_pred             CceecC--CCCCcCCCHHHHHhhHHhcCC
Q 031966           20 DVFECK--TCNRQFPSFQALGGHRASHKK   46 (150)
Q Consensus        20 ~~~~C~--~C~k~f~~~~~L~~H~~~h~~   46 (150)
                      ++|.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            579999  999999999999999999853

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.75  E-value=1.2e-05  Score=46.55  Aligned_cols=45  Identities=20%  Similarity=0.095  Sum_probs=38.6

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccchhhccccccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNESLNSAVI  103 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~  103 (150)
                      .|++++.+++|+.|..|++.|. ...|..|+ .|.++++..+..+..
T Consensus         7 ~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~   51 (75)
T 2d9k_A            7 GHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGR   51 (75)
T ss_dssp             CCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCC
T ss_pred             hhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCC
Confidence            4666679999999999999994 99999999 899999888877654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.67  E-value=9.7e-05  Score=41.42  Aligned_cols=57  Identities=18%  Similarity=0.278  Sum_probs=43.9

Q ss_pred             eecC--CCCCcCCCHHHHHhhH-HhcCCCCCCCCCcccccccccCCCCceecc--ccccccccchHHHHHhHhc
Q 031966           22 FECK--TCNRQFPSFQALGGHR-ASHKKPRLINGETKTLSSTTATKPKLHECS--ICGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        22 ~~C~--~C~k~f~~~~~L~~H~-~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~--~Cgk~f~~~~~l~~H~~~h   90 (150)
                      +.|.  .|++.|.+...|..|+ +.|.+.++-            ....+|.|.  .|++.+.....|..|++..
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~------------~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFK------------HPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCC------------CSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccC------------CCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            3453  5999999999999998 578654320            122479996  7999999999999999864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.59  E-value=1.3e-05  Score=50.77  Aligned_cols=33  Identities=21%  Similarity=0.241  Sum_probs=29.3

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhc
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      +-..|+|+++|.|..|++.|.+.+.|..|+++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            446789999999999999999999999998754

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.54  E-value=1.6e-05  Score=50.42  Aligned_cols=31  Identities=26%  Similarity=0.461  Sum_probs=28.0

Q ss_pred             cccCCCCceeccccccccccchHHHHHhHhc
Q 031966           60 TTATKPKLHECSICGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        60 ~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h   90 (150)
                      ..|+|++||.|..|++.|.+.+.|..|+++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            3468999999999999999999999999864

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.86  E-value=0.0027  Score=40.44  Aligned_cols=70  Identities=16%  Similarity=0.229  Sum_probs=49.7

Q ss_pred             CCceecCCCCCcCCCHHHHHhhH--HhcCCC-CCCC----------CCcc--cccccccCCCCceeccccccccccchHH
Q 031966           19 SDVFECKTCNRQFPSFQALGGHR--ASHKKP-RLIN----------GETK--TLSSTTATKPKLHECSICGQEFAMGQAL   83 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~--~~h~~~-k~~~----------c~~~--~~h~~~h~~~kp~~C~~Cgk~f~~~~~l   83 (150)
                      .+++.|.+|...|.+.+.+..|.  +.|... +.+.          ....  ..+...+.+.+.|.|..|++.|.+...+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~  109 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVA  109 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHH
Confidence            36799999999999999999998  445211 1110          0000  0122345667789999999999999999


Q ss_pred             HHHhH
Q 031966           84 GGHMR   88 (150)
Q Consensus        84 ~~H~~   88 (150)
                      ..|..
T Consensus       110 ~~H~~  114 (127)
T 1zu1_A          110 ESHYI  114 (127)
T ss_dssp             HHHHT
T ss_pred             HHHHC
Confidence            99985

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.15  E-value=0.0034  Score=34.93  Aligned_cols=43  Identities=12%  Similarity=0.193  Sum_probs=36.6

Q ss_pred             ccccccccchhh-hhcCCCC------ceecC--CCCCcCCCHHHHHhhHHhc
Q 031966            2 LLTRSNRAKLPI-KKRLASD------VFECK--TCNRQFPSFQALGGHRASH   44 (150)
Q Consensus         2 ~f~~~~~l~~h~-~~h~~~~------~~~C~--~C~k~f~~~~~L~~H~~~h   44 (150)
                      .|.....|..|+ +.|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus        12 ~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A           12 SASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            577888899998 5898776      89996  8999999999999998864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.89  E-value=0.0054  Score=31.70  Aligned_cols=30  Identities=30%  Similarity=0.450  Sum_probs=25.7

Q ss_pred             CceeccccccccccchHHHHHhHhcccchh
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIAMN   95 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~   95 (150)
                      -+|.|+.|+..|+....|+.||+.--++..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~v   40 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEMV   40 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTTC
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcchh
Confidence            578999999999999999999996655543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.70  E-value=0.0085  Score=30.96  Aligned_cols=25  Identities=36%  Similarity=0.513  Sum_probs=22.7

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhc
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      .+|.|+.|+..|.....|..||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5799999999999999999999844

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.17  E-value=0.045  Score=36.20  Aligned_cols=57  Identities=18%  Similarity=0.345  Sum_probs=36.4

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhcccchhh
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIAMNE   96 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~   96 (150)
                      ++..|+.|+..+ ....|..|....                  -..+.-.|..|+..|. ...|..|..++.|+.+.
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~------------------C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKD------------------CPRRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHT------------------CTTCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhh------------------CCCCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            455666666655 334455665433                  4557778999998774 56789999999887654

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=93.26  E-value=0.035  Score=32.70  Aligned_cols=31  Identities=26%  Similarity=0.471  Sum_probs=23.9

Q ss_pred             CCCceeccccccccccchHHHHHhHhcccchhhc
Q 031966           64 KPKLHECSICGQEFAMGQALGGHMRRHRIAMNES   97 (150)
Q Consensus        64 ~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~   97 (150)
                      .+.-..|-+||+.|.   .|.+|+..|+|..+..
T Consensus        18 ~~d~iiClecGK~fK---~LkRHL~~~hgltpee   48 (87)
T 2jsp_A           18 QDDHIVCLECGGSFK---SLKRHLTTHHSMTPEE   48 (87)
T ss_dssp             CSSCEECTBTCCEES---BHHHHHHHTTCSCHHH
T ss_pred             CCCceEecccchhhH---HHHHHHHHccCCCHHH
Confidence            344568999999988   4789999987776543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.56  E-value=0.12  Score=24.88  Aligned_cols=24  Identities=17%  Similarity=0.272  Sum_probs=21.7

Q ss_pred             CceeccccccccccchHHHHHhHh
Q 031966           66 KLHECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      ..|.|+.|-+.|.+...|..|...
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCcHHHHHcCCHHHHHHHHHh
Confidence            359999999999999999999875

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.93  E-value=0.16  Score=29.09  Aligned_cols=29  Identities=21%  Similarity=0.462  Sum_probs=22.5

Q ss_pred             Cceeccccccccc-------cchHHHHHhHhcccch
Q 031966           66 KLHECSICGQEFA-------MGQALGGHMRRHRIAM   94 (150)
Q Consensus        66 kp~~C~~Cgk~f~-------~~~~l~~H~~~h~~~~   94 (150)
                      .--.|..|++.++       .-++|.+|++..+.+.
T Consensus        27 ~~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e   62 (76)
T 2djr_A           27 QYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREE   62 (76)
T ss_dssp             SCEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHH
T ss_pred             CEEECCCCCCccCCCCCCCCchHHHHHHHHHHCHHH
Confidence            3467999999997       4679999998765543

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=89.74  E-value=0.21  Score=30.43  Aligned_cols=12  Identities=25%  Similarity=0.739  Sum_probs=11.0

Q ss_pred             CceecCCCCCcC
Q 031966           20 DVFECKTCNRQF   31 (150)
Q Consensus        20 ~~~~C~~C~k~f   31 (150)
                      .||+|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            689999999998

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=88.37  E-value=0.29  Score=23.45  Aligned_cols=24  Identities=29%  Similarity=0.448  Sum_probs=21.1

Q ss_pred             ceecCCCCCcCCCHHHHHhhHH-hc
Q 031966           21 VFECKTCNRQFPSFQALGGHRA-SH   44 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~-~h   44 (150)
                      .|.|+.|.+.|.+...|..|-. .|
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            4899999999999999999964 45

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=88.29  E-value=0.33  Score=30.55  Aligned_cols=28  Identities=21%  Similarity=0.228  Sum_probs=24.2

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHH
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRA   42 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~   42 (150)
                      .+.+.+.|.|.+|++.|.+...+..|..
T Consensus        87 ~~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           87 SDGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             SSCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             ccCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            3456778999999999999999999974

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=85.58  E-value=0.4  Score=27.02  Aligned_cols=60  Identities=18%  Similarity=0.423  Sum_probs=36.1

Q ss_pred             cccchhhhhcCCCCceec-CCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHH
Q 031966            7 NRAKLPIKKRLASDVFEC-KTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGG   85 (150)
Q Consensus         7 ~~l~~h~~~h~~~~~~~C-~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~   85 (150)
                      ..|..|+ .+-...+-.| ..|+..+.. ..|..|....                  =..++..|..|+..|.. ..|..
T Consensus         3 ~~l~~H~-~~C~~~~v~C~~~C~~~v~r-~~l~~H~~~~------------------C~~r~v~C~~C~~~~~~-~~l~~   61 (76)
T 2yuc_A            3 SGSSGHL-NTCSFNVIPCPNRCPMKLSR-RDLPAHLQHD------------------CPKRRLKCEFCGCDFSG-EAYES   61 (76)
T ss_dssp             CSCSCCC-CCCCCSCCBCTTCCSCBCCS-SSSTTTTTTS------------------CTTSCCCCSSSCCCCCH-HHHHH
T ss_pred             hHHHHHH-HHCCCcccCCCccccHHhhH-hHHHhhCHhh------------------CCCcceECCCCCCccCH-HHHHH
Confidence            3455665 3444566778 578877654 4455554321                  23456779999888754 45666


Q ss_pred             Hh
Q 031966           86 HM   87 (150)
Q Consensus        86 H~   87 (150)
                      |.
T Consensus        62 H~   63 (76)
T 2yuc_A           62 HE   63 (76)
T ss_dssp             TT
T ss_pred             HH
Confidence            65

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=85.02  E-value=0.44  Score=22.32  Aligned_cols=21  Identities=24%  Similarity=0.607  Sum_probs=19.1

Q ss_pred             eccccccccccchHHHHHhHh
Q 031966           69 ECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        69 ~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      .|..|.+.|+.-.+|..|++-
T Consensus        11 hcrfckkkysdvknlikhire   31 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRD   31 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            499999999999999999884

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=84.37  E-value=1.8  Score=20.83  Aligned_cols=25  Identities=20%  Similarity=0.296  Sum_probs=21.9

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHh
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      ...+.|..|+-.|....++..|.+-
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            4578999999999999999999764

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=83.82  E-value=0.92  Score=26.05  Aligned_cols=47  Identities=19%  Similarity=0.434  Sum_probs=34.0

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHH
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGH   86 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H   86 (150)
                      --|.|+.||..+.- ..|..|...-                  .+-..|.|--|++.|.. ...+.|
T Consensus         9 V~F~C~~Cgd~lKK-~kv~~H~~~C------------------r~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A            9 VFFTCNACGESVKK-IQVEKHVSNC------------------RNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             CEEEESSSCCEEET-THHHHHHHHC------------------TTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             eEEEcCCCCCeeec-ccchhHHhhC------------------CCCCcEEecccCCeeCC-CCEeCE
Confidence            35899999988765 5577886544                  34457899999999985 344555

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=83.25  E-value=0.43  Score=32.62  Aligned_cols=12  Identities=17%  Similarity=0.448  Sum_probs=9.0

Q ss_pred             CceecCCCCCcC
Q 031966           20 DVFECKTCNRQF   31 (150)
Q Consensus        20 ~~~~C~~C~k~f   31 (150)
                      ..|.|..||..+
T Consensus       170 ~~~~C~~CG~i~  181 (202)
T 1yuz_A          170 KFHLCPICGYIH  181 (202)
T ss_dssp             CEEECSSSCCEE
T ss_pred             cEEEECCCCCEE
Confidence            468899998653

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=82.77  E-value=1  Score=22.25  Aligned_cols=27  Identities=22%  Similarity=0.379  Sum_probs=20.6

Q ss_pred             CCceeccccccccccchHHHHHhHhccc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      ...|.|..||+.|.. .....|.-.|-.
T Consensus         7 ~~~~~C~~C~~~i~~-~~~~EH~D~H~A   33 (39)
T 2i5o_A            7 EDQVPCEKCGSLVPV-WDMPEHMDYHFA   33 (39)
T ss_dssp             CCEEECTTTCCEEEG-GGHHHHHHHHHH
T ss_pred             CCCcccccccCcCCc-ccccchhhHHHH
Confidence            457899999999987 556788776643

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=80.63  E-value=0.76  Score=24.31  Aligned_cols=22  Identities=23%  Similarity=0.714  Sum_probs=19.5

Q ss_pred             eeccccccccccchHHHHHhHh
Q 031966           68 HECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      -.|..|+..|+..-.++.|+-+
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs   35 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFS   35 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccccccCcccccccchhhhhcc
Confidence            4899999999999999999754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	150
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	3e-12
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	3e-11

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 55.5 bits (134), Expect = 3e-12
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 19 SDVFECKTCNRQFPSFQALGGHRASHKKPR 48
             + C  C R+F S QALGGH   H++ R
Sbjct: 3  PRSYTCSFCKREFRSAQALGGHMNVHRRDR 32

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.2 bits (128), Expect = 3e-11
 Identities = 15/27 (55%), Positives = 18/27 (66%)

Query: 65 PKLHECSICGQEFAMGQALGGHMRRHR 91
          P+ + CS C +EF   QALGGHM  HR
Sbjct: 3  PRSYTCSFCKREFRSAQALGGHMNVHR 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	150
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.8
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.6
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.59
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.56
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.53
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.5
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.49
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.48
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.48
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.47
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.42
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.42
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.4
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.39
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.37
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.36
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.35
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.35
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.34
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.33
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.32
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.32
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.3
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.29
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.23
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.2
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.16
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.15
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.12
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.09
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.06
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.04
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.03
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.98
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.97
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.89
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.87
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.85
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.82
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.81
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.8
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.79
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.72
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.71
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.66
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.57
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.45
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.45
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.45
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.41
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.41
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.32
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.25
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.21
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.2
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.16
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.12
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.07
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.05
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.02
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.0
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.0
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.93
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.86
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.79
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.78
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.76
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.73
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.73
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.7
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.68
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.66
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.65
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.65
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.64
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.62
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.55
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.51
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.48
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.4
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.32
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.21
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.15
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.05
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.04
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.0
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.97
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.91
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.86
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.78
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.63
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.42
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.2
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.12
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.09
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.98
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.82
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.32
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.16
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.15
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.99
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.35
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.23
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.16
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.75
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.3
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.26
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.19
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.08
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.86
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	90.73
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.95
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	89.89
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.13
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	88.51
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.45
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	82.96
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	81.79
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	80.96
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	80.34

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.6e-20  Score=101.54  Aligned_cols=53  Identities=28%  Similarity=0.681  Sum_probs=50.7

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCCCCCCCCCcccccccccCCCCceeccccccccccchHHHHHhHhc
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKKPRLINGETKTLSSTTATKPKLHECSICGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~~c~~~~~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h   90 (150)
                      ||||.|+ ||+.|....+|..|+++|                  +|++||.|.+||++|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~H------------------t~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMH------------------LGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHH------------------SCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhcc------------------ccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            7899995 999999999999999999                  7889999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.2e-16  Score=79.27  Aligned_cols=37  Identities=19%  Similarity=0.425  Sum_probs=35.4

Q ss_pred             hhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           11 LPIKKRLASDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        11 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      +|+++|+++|||.|++|||+|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999775

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.1e-16  Score=79.36  Aligned_cols=37  Identities=24%  Similarity=0.413  Sum_probs=34.8

Q ss_pred             ccccccCCCCceeccccccccccchHHHHHhHhcccc
Q 031966           57 LSSTTATKPKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        57 ~h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      .|+++|+++|||.|.+|||+|...++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4778889999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=9e-16  Score=74.10  Aligned_cols=33  Identities=27%  Similarity=0.392  Sum_probs=31.5

Q ss_pred             ccCCCCceeccccccccccchHHHHHhHhcccc
Q 031966           61 TATKPKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        61 ~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      +|+|+|||.|.+||++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            479999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2.4e-15  Score=72.60  Aligned_cols=33  Identities=18%  Similarity=0.386  Sum_probs=31.4

Q ss_pred             hcCCCCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           15 KRLASDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        15 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      +|+|+|||.|.+||++|...++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999999999999999765

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=8.3e-15  Score=73.36  Aligned_cols=37  Identities=22%  Similarity=0.458  Sum_probs=31.3

Q ss_pred             CCCCceecCCCCCcCCCHHHHHhhHH-hcCCCCCCCCC
Q 031966           17 LASDVFECKTCNRQFPSFQALGGHRA-SHKKPRLINGE   53 (150)
Q Consensus        17 ~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~k~~~c~   53 (150)
                      +.+|||.|++||+.|...++|.+|++ +|+++|||.|+
T Consensus         1 s~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            35899999999999999999999975 79766666654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.49  E-value=7.9e-15  Score=72.97  Aligned_cols=34  Identities=26%  Similarity=0.538  Sum_probs=32.8

Q ss_pred             hhhhcCCCCceecCCCCCcCCCHHHHHhhHHhcC
Q 031966           12 PIKKRLASDVFECKTCNRQFPSFQALGGHRASHK   45 (150)
Q Consensus        12 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~   45 (150)
                      |.|+|+|||||.|.+|++.|.+.++|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            7899999999999999999999999999999995

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.48  E-value=7.8e-15  Score=72.99  Aligned_cols=35  Identities=29%  Similarity=0.496  Sum_probs=32.8

Q ss_pred             cccccCCCCceeccccccccccchHHHHHhHhccc
Q 031966           58 SSTTATKPKLHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        58 h~~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      |.++|+|||||.|.+||++|...++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67888999999999999999999999999999974

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=9e-15  Score=72.28  Aligned_cols=34  Identities=32%  Similarity=0.412  Sum_probs=31.8

Q ss_pred             cccCCCCceeccccccccccchHHHHHhHhcccc
Q 031966           60 TTATKPKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        60 ~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      ++|+|+|||.|.+||++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4679999999999999999999999999999865

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.6e-14  Score=71.34  Aligned_cols=34  Identities=21%  Similarity=0.472  Sum_probs=31.8

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      |+|+|||||.|.+||++|...++|..|+++|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            6899999999999999999999999999999654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.42  E-value=3.5e-14  Score=69.31  Aligned_cols=32  Identities=19%  Similarity=0.391  Sum_probs=30.4

Q ss_pred             cCCCCceeccccccccccchHHHHHhHhcccc
Q 031966           62 ATKPKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        62 h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      |+|+|||.|.+|++.|.+.++|.+|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            58999999999999999999999999999875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.42  E-value=5.7e-14  Score=68.53  Aligned_cols=32  Identities=19%  Similarity=0.365  Sum_probs=30.2

Q ss_pred             cCCCCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           16 RLASDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        16 h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      |+|||||.|.+|+|.|.+.++|.+|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            79999999999999999999999999999654

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.7e-14  Score=77.16  Aligned_cols=43  Identities=21%  Similarity=0.408  Sum_probs=41.1

Q ss_pred             ccccccccchhhhhcCCCCceecCCCCCcCCCHHHHHhhHHhc
Q 031966            2 LLTRSNRAKLPIKKRLASDVFECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus         2 ~f~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      .|.....|..|+++|+|++||.|.+||++|...+.|..|+++|
T Consensus        11 ~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1          11 SFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             EESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             eECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4888899999999999999999999999999999999999987

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.39  E-value=5.6e-14  Score=65.05  Aligned_cols=28  Identities=32%  Similarity=0.608  Sum_probs=27.0

Q ss_pred             CCceeccccccccccchHHHHHhHhccc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      ||||.|.+|||+|+..++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.2e-13  Score=68.04  Aligned_cols=32  Identities=25%  Similarity=0.432  Sum_probs=28.7

Q ss_pred             cccCCCCceeccccccccccchHHHHHhHhcc
Q 031966           60 TTATKPKLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        60 ~~h~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      ++|+|||||.|++||++|+..++|.+|++.++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            46899999999999999999999999986543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.36  E-value=1e-13  Score=64.91  Aligned_cols=29  Identities=28%  Similarity=0.537  Sum_probs=27.7

Q ss_pred             CceeccccccccccchHHHHHhHhcccch
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      |||.|++||++|+..+.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999985

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.35  E-value=3e-13  Score=63.26  Aligned_cols=29  Identities=31%  Similarity=0.635  Sum_probs=27.4

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      |||.|++||++|.+.++|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999998775

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.6e-13  Score=64.11  Aligned_cols=29  Identities=24%  Similarity=0.510  Sum_probs=27.7

Q ss_pred             CceeccccccccccchHHHHHhHhcccch
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      |||.|.+||++|.+.++|.+|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999999984

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.7e-13  Score=66.74  Aligned_cols=31  Identities=16%  Similarity=0.402  Sum_probs=28.5

Q ss_pred             hhcCCCCceecCCCCCcCCCHHHHHhhHHhc
Q 031966           14 KKRLASDVFECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        14 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      ++|+|||||.|++|++.|...++|..|++.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccc
Confidence            5899999999999999999999999997543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=1.1e-13  Score=72.18  Aligned_cols=42  Identities=21%  Similarity=0.437  Sum_probs=37.2

Q ss_pred             ccccchhhhhcCCCCceecCC--CCCcCCCHHHHHhhHHhcCCCC
Q 031966            6 SNRAKLPIKKRLASDVFECKT--CNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus         6 ~~~l~~h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      ...|..|+. |+|++||.|.+  |++.|...++|..|+++|+|+|
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            356777875 99999999987  9999999999999999998775

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=2.5e-13  Score=62.84  Aligned_cols=28  Identities=29%  Similarity=0.616  Sum_probs=26.7

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCC
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKK   46 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~   46 (150)
                      ||||.|.+|+|+|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            7999999999999999999999999965

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=2.5e-13  Score=61.35  Aligned_cols=26  Identities=35%  Similarity=0.608  Sum_probs=25.0

Q ss_pred             CceeccccccccccchHHHHHhHhcc
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      |||+|.+|||+|...++|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999995

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.9e-13  Score=62.13  Aligned_cols=29  Identities=24%  Similarity=0.592  Sum_probs=27.3

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      |||.|.+|||.|.++++|.+|+++|+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999998775

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=5.3e-13  Score=66.63  Aligned_cols=36  Identities=25%  Similarity=0.442  Sum_probs=32.9

Q ss_pred             CCCceeccccccccccchHHHHHhH-hcccchhhccc
Q 031966           64 KPKLHECSICGQEFAMGQALGGHMR-RHRIAMNESLN   99 (150)
Q Consensus        64 ~~kp~~C~~Cgk~f~~~~~l~~H~~-~h~~~~~~~~~   99 (150)
                      .+|||.|.+||++|+..++|.+|++ +|+++++..++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4799999999999999999999986 79999998764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.23  E-value=1.2e-12  Score=68.19  Aligned_cols=34  Identities=21%  Similarity=0.382  Sum_probs=31.5

Q ss_pred             ccCCCCceeccc--cccccccchHHHHHhHhcccch
Q 031966           61 TATKPKLHECSI--CGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        61 ~h~~~kp~~C~~--Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      .|++++||.|.+  ||++|+..++|..|+++|+||+
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            369999999987  9999999999999999999984

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=2.5e-12  Score=57.96  Aligned_cols=26  Identities=23%  Similarity=0.577  Sum_probs=24.7

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHK   45 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~   45 (150)
                      |||+|.+|||+|...++|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999983

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=5.2e-12  Score=59.22  Aligned_cols=28  Identities=29%  Similarity=0.622  Sum_probs=26.6

Q ss_pred             Cceeccc--cccccccchHHHHHhHhcccc
Q 031966           66 KLHECSI--CGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        66 kp~~C~~--Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      |||.|.+  |||+|...++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899988  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=6.2e-12  Score=59.03  Aligned_cols=28  Identities=32%  Similarity=0.684  Sum_probs=26.5

Q ss_pred             Cceeccc--cccccccchHHHHHhHhcccc
Q 031966           66 KLHECSI--CGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        66 kp~~C~~--Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      |||.|.+  |||+|...++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999987  999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.5e-11  Score=60.19  Aligned_cols=32  Identities=28%  Similarity=0.448  Sum_probs=27.5

Q ss_pred             eecCC--CCCcCCCHHHHHhhHHhcCCCCCCCCC
Q 031966           22 FECKT--CNRQFPSFQALGGHRASHKKPRLINGE   53 (150)
Q Consensus        22 ~~C~~--C~k~f~~~~~L~~H~~~h~~~k~~~c~   53 (150)
                      |.|..  ||+.|.+.++|.+|+++|+|+|||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            78876  999999999999999999766666654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=3.7e-11  Score=56.22  Aligned_cols=28  Identities=21%  Similarity=0.528  Sum_probs=26.2

Q ss_pred             CceecCC--CCCcCCCHHHHHhhHHhcCCC
Q 031966           20 DVFECKT--CNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        20 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      |||.|..  |+|+|.+.++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6999988  999999999999999999775

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.5e-11  Score=57.41  Aligned_cols=29  Identities=28%  Similarity=0.561  Sum_probs=26.6

Q ss_pred             Cceecc--ccccccccchHHHHHhHhcccch
Q 031966           66 KLHECS--ICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        66 kp~~C~--~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      |||.|+  .||++|+..++|.+|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689996  59999999999999999999984

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=7.4e-11  Score=55.71  Aligned_cols=29  Identities=24%  Similarity=0.604  Sum_probs=26.4

Q ss_pred             CceecC--CCCCcCCCHHHHHhhHHhcCCCC
Q 031966           20 DVFECK--TCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        20 ~~~~C~--~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      |||.|+  .|||.|...++|.+|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689996  59999999999999999998775

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=4.4e-11  Score=56.05  Aligned_cols=28  Identities=25%  Similarity=0.460  Sum_probs=26.0

Q ss_pred             CceecCC--CCCcCCCHHHHHhhHHhcCCC
Q 031966           20 DVFECKT--CNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        20 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      |||.|..  |||+|...++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999987  999999999999999999775

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=7.4e-11  Score=54.70  Aligned_cols=27  Identities=26%  Similarity=0.581  Sum_probs=25.5

Q ss_pred             Cceeccc--cccccccchHHHHHhHhccc
Q 031966           66 KLHECSI--CGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        66 kp~~C~~--Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      |||.|.+  |||+|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999987  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.97  E-value=1.5e-10  Score=54.94  Aligned_cols=29  Identities=21%  Similarity=0.430  Sum_probs=26.8

Q ss_pred             CCceeccc--cccccccchHHHHHhHhcccc
Q 031966           65 PKLHECSI--CGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        65 ~kp~~C~~--Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      ||||.|.+  |||+|+..++|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999988  999999999999999999864

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.89  E-value=5.5e-10  Score=52.91  Aligned_cols=28  Identities=25%  Similarity=0.621  Sum_probs=26.2

Q ss_pred             CCceecCC--CCCcCCCHHHHHhhHHhcCC
Q 031966           19 SDVFECKT--CNRQFPSFQALGGHRASHKK   46 (150)
Q Consensus        19 ~~~~~C~~--C~k~f~~~~~L~~H~~~h~~   46 (150)
                      ||||.|..  |+|.|.+.++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            68999987  99999999999999999964

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=2.5e-10  Score=52.30  Aligned_cols=26  Identities=27%  Similarity=0.604  Sum_probs=24.3

Q ss_pred             Cceeccc--cccccccchHHHHHhHhcc
Q 031966           66 KLHECSI--CGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        66 kp~~C~~--Cgk~f~~~~~l~~H~~~h~   91 (150)
                      |||.|.+  |||+|...++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899987  9999999999999999996

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=4.2e-10  Score=52.10  Aligned_cols=27  Identities=26%  Similarity=0.566  Sum_probs=25.1

Q ss_pred             CceecCC--CCCcCCCHHHHHhhHHhcCC
Q 031966           20 DVFECKT--CNRQFPSFQALGGHRASHKK   46 (150)
Q Consensus        20 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~   46 (150)
                      |||.|.+  |+|.|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999987  99999999999999999965

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=7.5e-10  Score=47.48  Aligned_cols=26  Identities=38%  Similarity=0.744  Sum_probs=24.5

Q ss_pred             ceeccccccccccchHHHHHhHhccc
Q 031966           67 LHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      |++|+.|+|.|+++..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67899999999999999999999986

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=1.2e-09  Score=48.31  Aligned_cols=27  Identities=33%  Similarity=0.634  Sum_probs=25.6

Q ss_pred             CCceeccccccccccchHHHHHhHhcc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      |+||.|..||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=7.4e-10  Score=54.01  Aligned_cols=32  Identities=25%  Similarity=0.500  Sum_probs=29.1

Q ss_pred             eeccc--cccccccchHHHHHhHhcccchhhccc
Q 031966           68 HECSI--CGQEFAMGQALGGHMRRHRIAMNESLN   99 (150)
Q Consensus        68 ~~C~~--Cgk~f~~~~~l~~H~~~h~~~~~~~~~   99 (150)
                      |.|+.  ||++|...+.|++|+++|+|+++..++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            77876  999999999999999999999988764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=2.3e-09  Score=45.96  Aligned_cols=26  Identities=23%  Similarity=0.503  Sum_probs=24.1

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhcCC
Q 031966           21 VFECKTCNRQFPSFQALGGHRASHKK   46 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h~~   46 (150)
                      |.+|++|+|.|+++..|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999964

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=1.3e-09  Score=49.89  Aligned_cols=26  Identities=27%  Similarity=0.597  Sum_probs=24.3

Q ss_pred             CceecCC--CCCcCCCHHHHHhhHHhcC
Q 031966           20 DVFECKT--CNRQFPSFQALGGHRASHK   45 (150)
Q Consensus        20 ~~~~C~~--C~k~f~~~~~L~~H~~~h~   45 (150)
                      |||.|..  |||.|.+.++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999987  9999999999999999984

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=4.6e-09  Score=48.23  Aligned_cols=31  Identities=23%  Similarity=0.489  Sum_probs=27.9

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcCCCCCC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHKKPRLI   50 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~k~~   50 (150)
                      +...|+.|||.|.....|.+|..+|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            5678999999999999999999999777776

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.66  E-value=7.5e-09  Score=45.74  Aligned_cols=27  Identities=26%  Similarity=0.541  Sum_probs=25.4

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcC
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHK   45 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~   45 (150)
                      |+||.|++||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999984

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.4e-08  Score=44.27  Aligned_cols=27  Identities=30%  Similarity=0.552  Sum_probs=24.9

Q ss_pred             ceeccccccccccchHHHHHhHhcccc
Q 031966           67 LHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      .+.|.+|||+|...+.|++|+.+|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            467999999999999999999999986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=5.9e-08  Score=43.45  Aligned_cols=29  Identities=21%  Similarity=0.462  Sum_probs=26.8

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      |+||.|++|+..|.++..+.-|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999653

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=4.1e-08  Score=43.99  Aligned_cols=29  Identities=28%  Similarity=0.552  Sum_probs=27.1

Q ss_pred             CCceeccccccccccchHHHHHhHhcccc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      |+||.|++|+..|..+.-+.-|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=7.9e-08  Score=41.87  Aligned_cols=27  Identities=26%  Similarity=0.506  Sum_probs=24.5

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           21 VFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      ...|.+|||+|..++.|++|+.+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            467999999999999999999999764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=6e-08  Score=42.47  Aligned_cols=29  Identities=24%  Similarity=0.387  Sum_probs=26.9

Q ss_pred             CCceeccccccccccchHHHHHhHhcccc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      ++||+|..|..+-...+.|..|.+.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999974

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=1e-07  Score=41.72  Aligned_cols=29  Identities=24%  Similarity=0.358  Sum_probs=26.8

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      |+||+|..|......++.|..|.|.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            68999999999999999999999999763

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.3e-07  Score=43.28  Aligned_cols=31  Identities=29%  Similarity=0.342  Sum_probs=28.6

Q ss_pred             CceeccccccccccchHHHHHhHhcccchhh
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIAMNE   96 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~   96 (150)
                      +...|..|||.|..--.|.+|...|++|+|.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            5678999999999999999999999999875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=5.4e-07  Score=39.55  Aligned_cols=27  Identities=22%  Similarity=0.429  Sum_probs=25.1

Q ss_pred             eecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           22 FECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        22 ~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      |.|+.||.....++.|..|+|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            889999999999999999999997764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.21  E-value=6.8e-07  Score=37.72  Aligned_cols=24  Identities=38%  Similarity=0.776  Sum_probs=22.7

Q ss_pred             eecCCCCCcCCCHHHHHhhHHhcC
Q 031966           22 FECKTCNRQFPSFQALGGHRASHK   45 (150)
Q Consensus        22 ~~C~~C~k~f~~~~~L~~H~~~h~   45 (150)
                      |+|+.|.+.|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999984

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=3.6e-07  Score=40.14  Aligned_cols=27  Identities=26%  Similarity=0.368  Sum_probs=25.2

Q ss_pred             eeccccccccccchHHHHHhHhcccch
Q 031966           68 HECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      |.|++||.....++.|..|++.|+++.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999873

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=5.5e-07  Score=40.18  Aligned_cols=27  Identities=19%  Similarity=0.396  Sum_probs=24.1

Q ss_pred             Cceeccc--cccccccchHHHHHhHhccc
Q 031966           66 KLHECSI--CGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        66 kp~~C~~--Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      |||.|..  |+|++...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899987  99999999999999998654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.12  E-value=1.1e-06  Score=42.06  Aligned_cols=30  Identities=43%  Similarity=0.876  Sum_probs=26.8

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .+.|.|.+|++.|.+...|..|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            467999999999999999999999996554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=9.6e-07  Score=42.62  Aligned_cols=27  Identities=30%  Similarity=0.550  Sum_probs=24.2

Q ss_pred             CCCCceeccccccccccchHHHHHhHh
Q 031966           63 TKPKLHECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        63 ~~~kp~~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      +|.|||.|..|||.|-+..++.+|.-.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            477999999999999999999999754

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.05  E-value=1.1e-06  Score=42.07  Aligned_cols=31  Identities=48%  Similarity=0.844  Sum_probs=27.8

Q ss_pred             CCceeccccccccccchHHHHHhHhcccchh
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHRIAMN   95 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~~   95 (150)
                      .+.|.|.+|++.|.+..+|-.|++.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            3679999999999999999999999987754

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.5e-06  Score=37.59  Aligned_cols=26  Identities=31%  Similarity=0.511  Sum_probs=24.7

Q ss_pred             CceeccccccccccchHHHHHhHhcc
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      +||+|..|..+-...++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999996

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.1e-06  Score=39.57  Aligned_cols=28  Identities=25%  Similarity=0.425  Sum_probs=24.6

Q ss_pred             Cceeccc--cccccccchHHHHHh-Hhcccc
Q 031966           66 KLHECSI--CGQEFAMGQALGGHM-RRHRIA   93 (150)
Q Consensus        66 kp~~C~~--Cgk~f~~~~~l~~H~-~~h~~~   93 (150)
                      |||.|..  |.|+|+..+...+|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899987  999999999999998 888753

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.00  E-value=1.6e-06  Score=36.54  Aligned_cols=24  Identities=33%  Similarity=0.729  Sum_probs=22.6

Q ss_pred             eeccccccccccchHHHHHhHhcc
Q 031966           68 HECSICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999985

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=4.7e-06  Score=35.62  Aligned_cols=26  Identities=35%  Similarity=0.593  Sum_probs=23.9

Q ss_pred             ecCCCCCcCCCHHHHHhhHHhcCCCC
Q 031966           23 ECKTCNRQFPSFQALGGHRASHKKPR   48 (150)
Q Consensus        23 ~C~~C~k~f~~~~~L~~H~~~h~~~k   48 (150)
                      .|+.|.|.|.++..|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            59999999999999999999998764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=7.5e-06  Score=35.38  Aligned_cols=26  Identities=27%  Similarity=0.535  Sum_probs=24.7

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhcC
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASHK   45 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h~   45 (150)
                      +||+|..|..+-...+.|+.|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999994

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.79  E-value=6.5e-06  Score=35.97  Aligned_cols=25  Identities=28%  Similarity=0.557  Sum_probs=22.6

Q ss_pred             Cceeccc--cccccccchHHHHHhHhc
Q 031966           66 KLHECSI--CGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        66 kp~~C~~--Cgk~f~~~~~l~~H~~~h   90 (150)
                      .||+|+.  |++.|+..+-|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899964  999999999999999987

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.78  E-value=6.7e-06  Score=36.08  Aligned_cols=28  Identities=25%  Similarity=0.337  Sum_probs=25.2

Q ss_pred             Cceeccc--cccccccchHHHHHhHhcccc
Q 031966           66 KLHECSI--CGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        66 kp~~C~~--Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      +||.|.+  |.|.|.+--.|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5888875  999999999999999999985

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=6.1e-06  Score=35.25  Aligned_cols=26  Identities=31%  Similarity=0.485  Sum_probs=24.3

Q ss_pred             eccccccccccchHHHHHhHhcccch
Q 031966           69 ECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        69 ~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      .|+.|.|.|.++-.|+.|-+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            59999999999999999999999974

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=3.6e-06  Score=37.84  Aligned_cols=27  Identities=19%  Similarity=0.587  Sum_probs=24.0

Q ss_pred             CceecCC--CCCcCCCHHHHHhhH-HhcCC
Q 031966           20 DVFECKT--CNRQFPSFQALGGHR-ASHKK   46 (150)
Q Consensus        20 ~~~~C~~--C~k~f~~~~~L~~H~-~~h~~   46 (150)
                      |||.|+.  |.|+|+..+.-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            6999987  999999999999997 88854

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.73  E-value=9e-06  Score=35.50  Aligned_cols=25  Identities=28%  Similarity=0.595  Sum_probs=22.6

Q ss_pred             CceecC--CCCCcCCCHHHHHhhHHhc
Q 031966           20 DVFECK--TCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        20 ~~~~C~--~C~k~f~~~~~L~~H~~~h   44 (150)
                      .||+|.  .|++.|+.++.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            489996  4999999999999999887

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.70  E-value=7.8e-06  Score=36.69  Aligned_cols=27  Identities=22%  Similarity=0.391  Sum_probs=23.6

Q ss_pred             ceeccccccccccchHHHHHhH-hcccc
Q 031966           67 LHECSICGQEFAMGQALGGHMR-RHRIA   93 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~-~h~~~   93 (150)
                      ||.|.+|++.|+...-|.+|+. .|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            7999999999999999999986 56653

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.3e-05  Score=35.26  Aligned_cols=27  Identities=26%  Similarity=0.424  Sum_probs=23.8

Q ss_pred             CceeccccccccccchHHHHHhHh-ccc
Q 031966           66 KLHECSICGQEFAMGQALGGHMRR-HRI   92 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~-h~~   92 (150)
                      +||.|..|.......++|+.|+++ |..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            689999999999999999999997 443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=9.2e-06  Score=35.56  Aligned_cols=24  Identities=25%  Similarity=0.508  Sum_probs=22.3

Q ss_pred             ceeccccccccccchHHHHHhHhc
Q 031966           67 LHECSICGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~h   90 (150)
                      ||.|..|..+|...++|..||+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999863

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.9e-05  Score=38.00  Aligned_cols=26  Identities=19%  Similarity=0.465  Sum_probs=23.5

Q ss_pred             CCCCceecCCCCCcCCCHHHHHhhHH
Q 031966           17 LASDVFECKTCNRQFPSFQALGGHRA   42 (150)
Q Consensus        17 ~~~~~~~C~~C~k~f~~~~~L~~H~~   42 (150)
                      +|-|||.|..|+|.|-....+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            57799999999999999999998864

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=2.3e-05  Score=34.83  Aligned_cols=26  Identities=19%  Similarity=0.517  Sum_probs=23.3

Q ss_pred             CceecCC--CCCcCCCHHHHHhhHHhcC
Q 031966           20 DVFECKT--CNRQFPSFQALGGHRASHK   45 (150)
Q Consensus        20 ~~~~C~~--C~k~f~~~~~L~~H~~~h~   45 (150)
                      |||.|.+  |+|.+..++.|..|++.+.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            6899986  9999999999999998753

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.64  E-value=1.7e-05  Score=34.64  Aligned_cols=29  Identities=28%  Similarity=0.486  Sum_probs=26.7

Q ss_pred             CCceeccccccccccchHHHHHhHhcccc
Q 031966           65 PKLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        65 ~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      +.-|.|..|...|...-.|+.||..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45799999999999999999999999986

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.62  E-value=3e-05  Score=33.85  Aligned_cols=29  Identities=31%  Similarity=0.541  Sum_probs=26.5

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHhcCCC
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      |..|.|..|...|.+.-.|..|+-+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56899999999999999999999999764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.55  E-value=1.5e-05  Score=34.98  Aligned_cols=28  Identities=32%  Similarity=0.692  Sum_probs=24.6

Q ss_pred             CceecCC--CCCcCCCHHHHHhhHHhcCCC
Q 031966           20 DVFECKT--CNRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        20 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~~   47 (150)
                      +||.|.+  |.|.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5899964  999999999999999999764

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.51  E-value=3.2e-05  Score=34.66  Aligned_cols=25  Identities=32%  Similarity=0.573  Sum_probs=22.1

Q ss_pred             ceecCCCCCcCCCHHHHHhhH-HhcC
Q 031966           21 VFECKTCNRQFPSFQALGGHR-ASHK   45 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~-~~h~   45 (150)
                      ||.|.+|++.|.+..-|.+|+ +.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            799999999999999999997 4563

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=6e-05  Score=33.05  Aligned_cols=25  Identities=16%  Similarity=0.418  Sum_probs=22.9

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhc
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      +||.|..|.......++|+.|+++.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhcc
Confidence            6899999999999999999999764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=5e-05  Score=35.93  Aligned_cols=28  Identities=32%  Similarity=0.555  Sum_probs=24.8

Q ss_pred             CCCceec--cccccccccchHHHHHhHhcc
Q 031966           64 KPKLHEC--SICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        64 ~~kp~~C--~~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      .+|||.|  +.|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4799999  569999999999999998875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=5.9e-05  Score=33.00  Aligned_cols=27  Identities=19%  Similarity=0.432  Sum_probs=23.3

Q ss_pred             CceeccccccccccchHHHHHhHhccc
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      +||+|..|.....+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            699999999888999999999985433

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00013  Score=34.43  Aligned_cols=27  Identities=26%  Similarity=0.592  Sum_probs=24.4

Q ss_pred             CCCceecC--CCCCcCCCHHHHHhhHHhc
Q 031966           18 ASDVFECK--TCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        18 ~~~~~~C~--~C~k~f~~~~~L~~H~~~h   44 (150)
                      .+|||.|.  -|+..|.+...|..|...|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            48999994  5999999999999999877

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.0002  Score=31.16  Aligned_cols=24  Identities=29%  Similarity=0.521  Sum_probs=22.3

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhc
Q 031966           21 VFECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      ||.|..|.-.|..+.+|..|+.+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999764

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00017  Score=31.08  Aligned_cols=26  Identities=31%  Similarity=0.369  Sum_probs=23.5

Q ss_pred             ceeccccccccccchHHHHHhHhccc
Q 031966           67 LHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      |-+|.+|..+.+++.+|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56899999999999999999999854

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.04  E-value=0.00024  Score=29.69  Aligned_cols=23  Identities=26%  Similarity=0.592  Sum_probs=21.1

Q ss_pred             CceecCCCCCcCCCHHHHHhhHH
Q 031966           20 DVFECKTCNRQFPSFQALGGHRA   42 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~   42 (150)
                      .||+|..|...|-++..|..|+-
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999973

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=0.00017  Score=30.17  Aligned_cols=22  Identities=36%  Similarity=0.631  Sum_probs=20.7

Q ss_pred             ceeccccccccccchHHHHHhH
Q 031966           67 LHECSICGQEFAMGQALGGHMR   88 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~   88 (150)
                      ||+|..|...|-.+..|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999985

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00024  Score=35.23  Aligned_cols=25  Identities=28%  Similarity=0.658  Sum_probs=23.2

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHhc
Q 031966           20 DVFECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      -.|.|..|||.|.....|+.|...|
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhHHhc
Confidence            3589999999999999999999988

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.91  E-value=0.00043  Score=29.59  Aligned_cols=23  Identities=30%  Similarity=0.560  Sum_probs=20.8

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHh
Q 031966           21 VFECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      ||+|..|||.+-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999999753

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00041  Score=29.82  Aligned_cols=24  Identities=29%  Similarity=0.376  Sum_probs=22.7

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhc
Q 031966           21 VFECKTCNRQFPSFQALGGHRASH   44 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h   44 (150)
                      |-+|.+|....+++..|..|.|+|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            678999999999999999999998

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.78  E-value=0.00028  Score=30.17  Aligned_cols=22  Identities=27%  Similarity=0.474  Sum_probs=19.9

Q ss_pred             ceeccccccccccchHHHHHhH
Q 031966           67 LHECSICGQEFAMGQALGGHMR   88 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~   88 (150)
                      ||+|..|||.+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7899999999999999998864

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.00078  Score=29.34  Aligned_cols=24  Identities=21%  Similarity=0.382  Sum_probs=21.8

Q ss_pred             CceecCCCCCcCCCHHHHHhhHHh
Q 031966           20 DVFECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      +||+|..|.---.+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            699999999988999999999864

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00065  Score=33.65  Aligned_cols=26  Identities=27%  Similarity=0.680  Sum_probs=23.1

Q ss_pred             ceeccccccccccchHHHHHhHhccc
Q 031966           67 LHECSICGQEFAMGQALGGHMRRHRI   92 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~h~~   92 (150)
                      -|.|..|||.|.....|++|..-|-.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            57899999999999999999887753

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.0015  Score=29.75  Aligned_cols=28  Identities=21%  Similarity=0.420  Sum_probs=24.1

Q ss_pred             CceeccccccccccchHHHHHhHhcccc
Q 031966           66 KLHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      ..|.|..|||.|.....+.+|....+|.
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCCC
Confidence            3689999999999999999998876653

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.12  E-value=0.0022  Score=26.73  Aligned_cols=23  Identities=22%  Similarity=0.547  Sum_probs=20.6

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHh
Q 031966           21 VFECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      .|.|+.|-|.|.++.++..|.++
T Consensus         1 vypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           1 VYPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCchhhHHhccccCceEEEEE
Confidence            38899999999999999999764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.09  E-value=0.0017  Score=27.06  Aligned_cols=22  Identities=23%  Similarity=0.563  Sum_probs=20.6

Q ss_pred             eeccccccccccchHHHHHhHh
Q 031966           68 HECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        68 ~~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      |.|+.|-+.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999886

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.0015  Score=30.05  Aligned_cols=24  Identities=38%  Similarity=0.360  Sum_probs=19.6

Q ss_pred             ccccccccccchHHHHHhHhcccc
Q 031966           70 CSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        70 C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      |.-=++.|.....|..|+|+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333457799999999999999986

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.82  E-value=0.0023  Score=27.14  Aligned_cols=24  Identities=29%  Similarity=0.491  Sum_probs=20.3

Q ss_pred             eecc--ccccccccchHHHHHhHhcc
Q 031966           68 HECS--ICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        68 ~~C~--~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      |.|.  .|+|+|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            4564  49999999999999998885

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.0082  Score=27.21  Aligned_cols=26  Identities=19%  Similarity=0.539  Sum_probs=22.9

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHhcCC
Q 031966           21 VFECKTCNRQFPSFQALGGHRASHKK   46 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~h~~   46 (150)
                      .|.|..|||.|.+...+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58999999999999999999877654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.16  E-value=0.0058  Score=27.96  Aligned_cols=20  Identities=25%  Similarity=0.159  Sum_probs=17.2

Q ss_pred             CCcCCCHHHHHhhHHhcCCC
Q 031966           28 NRQFPSFQALGGHRASHKKP   47 (150)
Q Consensus        28 ~k~f~~~~~L~~H~~~h~~~   47 (150)
                      ++.|.....|..|+|+|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45699999999999999765

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.15  E-value=0.0064  Score=26.73  Aligned_cols=28  Identities=29%  Similarity=0.542  Sum_probs=24.2

Q ss_pred             Cceeccc--cccccccchHHHHHhHhcccc
Q 031966           66 KLHECSI--CGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        66 kp~~C~~--Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      |.|.|..  |+-.|....-|..|.-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4577764  999999999999999999986

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.99  E-value=0.0086  Score=26.87  Aligned_cols=23  Identities=35%  Similarity=0.605  Sum_probs=20.7

Q ss_pred             CceecCCCCCcCCCHHHHHhhHH
Q 031966           20 DVFECKTCNRQFPSFQALGGHRA   42 (150)
Q Consensus        20 ~~~~C~~C~k~f~~~~~L~~H~~   42 (150)
                      ..|.|.-||-.|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            45899999999999999999975

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.35  E-value=0.0093  Score=26.77  Aligned_cols=23  Identities=26%  Similarity=0.469  Sum_probs=20.5

Q ss_pred             CceeccccccccccchHHHHHhH
Q 031966           66 KLHECSICGQEFAMGQALGGHMR   88 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~   88 (150)
                      ..|.|.-||-.|+..+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            35889999999999999999975

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.23  E-value=0.01  Score=25.37  Aligned_cols=20  Identities=25%  Similarity=0.446  Sum_probs=18.0

Q ss_pred             ccccccccchHHHHHhHhcc
Q 031966           72 ICGQEFAMGQALGGHMRRHR   91 (150)
Q Consensus        72 ~Cgk~f~~~~~l~~H~~~h~   91 (150)
                      .|+|.|...+++++|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            49999999999999998874

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.16  E-value=0.014  Score=24.76  Aligned_cols=23  Identities=30%  Similarity=0.603  Sum_probs=20.9

Q ss_pred             ceeccccccccccchHHHHHhHh
Q 031966           67 LHECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      .|.|+.|+.....++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            37899999999999999999985

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.75  E-value=0.024  Score=24.01  Aligned_cols=23  Identities=26%  Similarity=0.531  Sum_probs=20.8

Q ss_pred             ceecCCCCCcCCCHHHHHhhHHh
Q 031966           21 VFECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      .|.|+.|+-...+++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            48999999999999999999864

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.30  E-value=0.02  Score=25.93  Aligned_cols=27  Identities=19%  Similarity=0.554  Sum_probs=23.3

Q ss_pred             CCCCceecCCCCCcCCCHHHHHhhHHh
Q 031966           17 LASDVFECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        17 ~~~~~~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      .|+..|+|.+|.+.+..-+++-+|..+
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            356789999999999999999999743

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.26  E-value=0.019  Score=30.83  Aligned_cols=25  Identities=28%  Similarity=0.465  Sum_probs=21.9

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHh
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      .-.|-|..|+|.|.+...|..|.++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            3458999999999999999999864

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.19  E-value=0.021  Score=30.66  Aligned_cols=24  Identities=33%  Similarity=0.638  Sum_probs=21.7

Q ss_pred             CceeccccccccccchHHHHHhHh
Q 031966           66 KLHECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        66 kp~~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      -.|-|..|+|.|.+...|..|.++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            358899999999999999999975

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.08  E-value=0.055  Score=26.44  Aligned_cols=28  Identities=18%  Similarity=0.356  Sum_probs=24.5

Q ss_pred             CCCCceeccccccccccchHHHHHhHhc
Q 031966           63 TKPKLHECSICGQEFAMGQALGGHMRRH   90 (150)
Q Consensus        63 ~~~kp~~C~~Cgk~f~~~~~l~~H~~~h   90 (150)
                      ..+.|-.|+.|+-......+|++|...-
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~   47 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            4568999999999999999999998753

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.86  E-value=0.19  Score=21.50  Aligned_cols=21  Identities=29%  Similarity=0.713  Sum_probs=19.1

Q ss_pred             ceecCCCCCcCCCHHHHHhhH
Q 031966           21 VFECKTCNRQFPSFQALGGHR   41 (150)
Q Consensus        21 ~~~C~~C~k~f~~~~~L~~H~   41 (150)
                      .|.|..|||...+...++-|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhv   22 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEE
Confidence            488999999999999999886

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.73  E-value=0.046  Score=25.64  Aligned_cols=14  Identities=21%  Similarity=0.653  Sum_probs=10.1

Q ss_pred             CCCCceeccccccc
Q 031966           63 TKPKLHECSICGQE   76 (150)
Q Consensus        63 ~~~kp~~C~~Cgk~   76 (150)
                      .|+-|-.|+.||..
T Consensus        16 ~g~~P~~CPvCg~~   29 (37)
T d1nnqa2          16 VDEAPEYCPVCGAP   29 (37)
T ss_dssp             ESCCCSBCTTTCCB
T ss_pred             cCCCCCcCCCCCCc
Confidence            45567889999843

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.95  E-value=0.18  Score=24.47  Aligned_cols=27  Identities=15%  Similarity=0.213  Sum_probs=23.7

Q ss_pred             CCCCceecCCCCCcCCCHHHHHhhHHh
Q 031966           17 LASDVFECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        17 ~~~~~~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      ..+.|-.|+.|+-...++.+|.+|...
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            357899999999999999999999754

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.89  E-value=0.075  Score=22.72  Aligned_cols=19  Identities=32%  Similarity=0.469  Sum_probs=16.4

Q ss_pred             cccccccccchHHHHHhHh
Q 031966           71 SICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        71 ~~Cgk~f~~~~~l~~H~~~   89 (150)
                      +.||+.|+++..|..|.+-
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4599999999999998764

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.13  E-value=0.097  Score=23.60  Aligned_cols=27  Identities=11%  Similarity=0.303  Sum_probs=23.4

Q ss_pred             CCCCceeccccccccccchHHHHHhHh
Q 031966           63 TKPKLHECSICGQEFAMGQALGGHMRR   89 (150)
Q Consensus        63 ~~~kp~~C~~Cgk~f~~~~~l~~H~~~   89 (150)
                      .|+.-|.|..|.+.+..-+++-+|..+
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            356689999999999999999999764

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=88.51  E-value=0.097  Score=24.30  Aligned_cols=14  Identities=21%  Similarity=0.615  Sum_probs=9.8

Q ss_pred             CCCCceeccccccc
Q 031966           63 TKPKLHECSICGQE   76 (150)
Q Consensus        63 ~~~kp~~C~~Cgk~   76 (150)
                      .|+-|-+|+.||..
T Consensus        16 ~g~~Pe~CPvCg~~   29 (36)
T d1yuza2          16 KGEDFEKCPICFRP   29 (36)
T ss_dssp             ESSCCSBCTTTCCB
T ss_pred             eCCCCCcCCCCCCc
Confidence            45567789999843

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.45  E-value=0.14  Score=26.78  Aligned_cols=22  Identities=23%  Similarity=0.587  Sum_probs=16.6

Q ss_pred             cCCCCceecCCCCCcCCCHHHH
Q 031966           16 RLASDVFECKTCNRQFPSFQAL   37 (150)
Q Consensus        16 h~~~~~~~C~~C~k~f~~~~~L   37 (150)
                      -+...-|.|+.|++.|.....+
T Consensus         9 ~~~~~~y~Cp~C~~~ys~Lda~   30 (62)
T d1vd4a_           9 STNRASFKCPVCSSTFTDLEAN   30 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHH
T ss_pred             cccCCceECCCCCCCcchhhHH
Confidence            3455679999999999765544

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=82.96  E-value=0.26  Score=31.09  Aligned_cols=26  Identities=31%  Similarity=0.704  Sum_probs=21.4

Q ss_pred             ceeccccccccccchHHHHHhHhcccc
Q 031966           67 LHECSICGQEFAMGQALGGHMRRHRIA   93 (150)
Q Consensus        67 p~~C~~Cgk~f~~~~~l~~H~~~h~~~   93 (150)
                      -|+|..||| +-.-.+|.+|++.|.-.
T Consensus       146 FYKCe~CgK-YvDie~~~~H~k~HG~~  171 (218)
T d2czra1         146 FYKCEECGK-YVDIENLEAHLREHGIK  171 (218)
T ss_dssp             EEECTTTCC-EEEGGGHHHHHHTTTCC
T ss_pred             EeehhhcCc-eecHHHHHHHHHHcCcc
Confidence            489999997 56778999999988643

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=81.79  E-value=0.59  Score=19.85  Aligned_cols=23  Identities=22%  Similarity=0.537  Sum_probs=19.2

Q ss_pred             CceecC--CCCCcCCCHHHHHhhHH
Q 031966           20 DVFECK--TCNRQFPSFQALGGHRA   42 (150)
Q Consensus        20 ~~~~C~--~C~k~f~~~~~L~~H~~   42 (150)
                      +.|.|+  .|.-.|..+.+++.|..
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfn   25 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFN   25 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHH
T ss_pred             CCccccCCCcceEEeehHHHHHHHh
Confidence            357886  59999999999999974

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.96  E-value=0.84  Score=20.42  Aligned_cols=25  Identities=20%  Similarity=0.404  Sum_probs=22.1

Q ss_pred             CCceecCCCCCcCCCHHHHHhhHHh
Q 031966           19 SDVFECKTCNRQFPSFQALGGHRAS   43 (150)
Q Consensus        19 ~~~~~C~~C~k~f~~~~~L~~H~~~   43 (150)
                      .+-|.|+.|-|-..+...|.+|+..
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHHh
Confidence            4679999999999999999999853

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.34  E-value=0.48  Score=24.67  Aligned_cols=32  Identities=16%  Similarity=0.359  Sum_probs=27.3

Q ss_pred             CCCCceeccccccccccchHHHHHhHhcccch
Q 031966           63 TKPKLHECSICGQEFAMGQALGGHMRRHRIAM   94 (150)
Q Consensus        63 ~~~kp~~C~~Cgk~f~~~~~l~~H~~~h~~~~   94 (150)
                      .+...|.|..|.-.|..-..|..|...|..+-
T Consensus        14 ~~s~~yQC~HCd~K~~s~~el~~hl~~hneef   45 (75)
T d1x6fa1          14 LQNSTYQCKHCDSKLQSTAELTSHLNIHNEEF   45 (75)
T ss_dssp             CCCSCEECSSSCCEESSHHHHHHHHHHHHHHH
T ss_pred             cCCceeeechhHHHHhhHHHHHHHHHhccHHH
Confidence            34457999999999999999999999998663