Citrus Sinensis ID: 032247

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
Protein Sequence
MESHMGQGYKFQPSDELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTDWVMHEYHVKDDPSYEVCA
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccEEEEEEEEEEcccccccccccccccEEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHHHHccccccccEEEHEEccccccccccHHccccccccEEEEEcccccccccccccccHcccccEEEcccccEEEccccEEEEEEEEEEEcccccccccccccEEEEEEEccccccEEEcc
Coil and Loop (DISEMBL)
meshmgqgykfqpsDELIVSLLKekrldphflygpikdighicnlepgdlatesetdsedracyffyeprykyrnsnrvhrraeaghwkitsedsqieasngligtkKFLTFyrrspgskvpvktdwvmheyhvkddpsyevca
Flexible Loop (DISEMBL)
meshmgqgykfqpsDELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLAtesetdsedrACYFFyeprykyrnsnrvHRRAEAGhwkitsedsqieasnglIGTKKFltfyrrspgskvpvktdwvmheyhvkddpsyevca
Low Complexity Region (SEG)
MESHMGQGYKFQPSDELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTDWVMHEYHVKDDPSYEVCA
Disordered region (IsUnstruct)
***************ELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGD***********RACYFFYEPRYKYRNSNRVHRRAEAGHWKITS***QIEASNGLIGTKKFLTFYRRSPGSKVPVKTDWVMHEYHV**********
Disordered Region (DISOPRED)
**SHMGQGYKFQPSDELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTDWVMHEYHVKDD*******
Disordered Region (DISEMBL)
*********KFQPSDELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDL********EDRACYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTDWVMHEYHVKDDPSYEVCA
Disordered Region (DISPRO)
****MGQGYKFQPSDELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTDWVMHEYHVKDDPSYEVCA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESHMGQGYKFQPSDELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTDWVMHEYHVKDDPSYEVCA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	144	2.2.26 [Sep-21-2011]
Q84K00	567	NAC domain-containing pro	no	no	0.909	0.231	0.343	6e-15
Q9FWX2	395	NAC domain-containing pro	no	no	0.909	0.331	0.362	3e-14
Q9FLJ2	336	NAC domain-containing pro	no	no	0.847	0.363	0.376	1e-13
O81913	359	NAC domain-containing pro	no	no	0.847	0.339	0.378	2e-13
Q9FRV4	310	Protein CUP-SHAPED COTYLE	no	no	0.923	0.429	0.370	2e-13
Q8H4S4	425	NAC transcription factor	no	no	0.875	0.296	0.350	3e-13
A2YMR0	425	NAC transcription factor	N/A	no	0.875	0.296	0.350	4e-13
O49255	268	NAC transcription factor	no	no	0.895	0.481	0.335	4e-13
Q7GCL7	489	NAC domain-containing pro	no	no	0.861	0.253	0.359	7e-13
Q9ZVH0	418	Protein FEZ OS=Arabidopsi	no	no	0.881	0.303	0.370	9e-13

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 6/137 (4%)

Query: 3   SHMGQGYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDR 61
           + +  G++F P+DE L+   LK K  +  F +  I  +  I   EP DL  +S+  S D 
Sbjct: 7   TSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAIS-VTDIYKSEPWDLPDKSKLKSRDL 65

Query: 62  ACYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-RSPGSK 120
             YFF     KY N ++ +R  E G+WK T +D +I   + ++G KK L +++ R+P  +
Sbjct: 66  EWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGE 125

Query: 121 VPVKTDWVMHEYHVKDD 137
              +T+WVMHEY + D+
Sbjct: 126 ---RTNWVMHEYRLSDE 139

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 7/138 (5%)

Query: 3   SHMGQGYKFQPSDELIVSL-LKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDR 61
           SH+  G++F P+DE +V   L++K          IKDI  +  +EP DL    +   E++
Sbjct: 5   SHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDID-LYKIEPWDLQELCKIGHEEQ 63

Query: 62  A-CYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-RSPGS 119
           +  YFF     KY    R +R  +AG WK T  D  I   + LIG +K L FY+ R+P  
Sbjct: 64  SDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNG 123

Query: 120 KVPVKTDWVMHEYHVKDD 137
           +   K+DW+MHEY ++ D
Sbjct: 124 Q---KSDWIMHEYRLETD 138

Transcription factor probably involved in xylem formation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 8/130 (6%)

Query: 8   GYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++F P+DE LI   L +K LD  F    I ++  +   EP +L   ++    ++  YFF
Sbjct: 19  GFRFHPTDEELITHYLHKKVLDTSFSAKAIGEV-DLNKSEPWELPWMAKMG--EKEWYFF 75

Query: 67  YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-RSPGSKVPVKT 125
                KY    R +R  EAG+WK T +D +I     L+G KK L FYR R+P  +   KT
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGQ---KT 132

Query: 126 DWVMHEYHVK 135
           +WVMHEY ++
Sbjct: 133 NWVMHEYRLE 142

Arabidopsis thaliana (taxid: 3702)

>sp|O81913|NAC4_ARATH NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 10/132 (7%)

Query: 8   GYKFQPSDELIVS-LLKEKRLDPHFLY-GPIKDIGHICNLEPGDLATESETDSEDRACYF 65
           G++F+P+DE IV   L+ K LD    +   +     IC+ EP DL ++S   S D   YF
Sbjct: 6   GFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRDGVWYF 65

Query: 66  FYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNG---LIGTKKFLTFYRRSPGSKVP 122
           F     KY   ++  RR  +G WK T +   +    G    IG K+ L F  R  GS   
Sbjct: 66  FSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKNRD-GS--- 121

Query: 123 VKTDWVMHEYHV 134
            KTDWVMHEYH 
Sbjct: 122 -KTDWVMHEYHA 132

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FRV4|NAC54_ARATH Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 10/143 (6%)

Query: 2   ESHMGQGYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSED 60
           ES M  G++F P+DE LI   L +K LD +F    I  +  +   EP +L  +++    +
Sbjct: 17  ESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQV-DLNKSEPWELPEKAKMG--E 73

Query: 61  RACYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEAS--NGLIGTKKFLTFYR-RSP 117
           +  YFF     KY    R +R  EAG+WK T +D +I++S    L+G KK L FY+ R+P
Sbjct: 74  KEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAP 133

Query: 118 GSKVPVKTDWVMHEYHVKDDPSY 140
             +   K+ WVMHEY +    SY
Sbjct: 134 KGE---KSCWVMHEYRLDGKFSY 153

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 11/137 (8%)

Query: 8   GYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++F P+DE L+V  LK+K          I ++  +   +P DL  ++    ++   ++F
Sbjct: 32  GFRFHPTDEELVVHYLKKKAASVPLPVTIIAEV-DLYKFDPWDLPEKANFGEQE---WYF 87

Query: 67  YEPR-YKYRNSNRVHRRAEAGHWKITSEDSQIEASNGL---IGTKKFLTFYRRSPGSKVP 122
           + PR  KY N  R +R A +G+WK T  D  I +S      +G KK L FYR  P     
Sbjct: 88  FSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKG-- 145

Query: 123 VKTDWVMHEYHVKDDPS 139
           VKT+W+MHEY + D  S
Sbjct: 146 VKTNWIMHEYRLTDTSS 162

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 11/137 (8%)

Query: 8   GYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++F P+DE L+V  LK+K          I ++  +   +P +L  ++    ++   ++F
Sbjct: 32  GFRFHPTDEELVVHYLKKKAASVPLPVTIIAEV-DLYKFDPWELPEKANFGEQE---WYF 87

Query: 67  YEPR-YKYRNSNRVHRRAEAGHWKITSEDSQIEASNGL---IGTKKFLTFYRRSPGSKVP 122
           + PR  KY N  R +R A +G+WK T  D  I AS      +G KK L FYR  P     
Sbjct: 88  FSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPKG-- 145

Query: 123 VKTDWVMHEYHVKDDPS 139
           VKT+W+MHEY + D  S
Sbjct: 146 VKTNWIMHEYRLTDTSS 162

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 8/137 (5%)

Query: 2   ESHMGQGYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSED 60
           +S +  G++F P+DE LIV  L+ + +        I ++  I   +P  L  ++E    +
Sbjct: 6   QSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVD-IYKFDPWQLPEKTEFGENE 64

Query: 61  RACYFFYEPR-YKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGS 119
              ++F+ PR  KY N  R +R A +G+WK T  D  I + +  +G KK L FY+  P  
Sbjct: 65  ---WYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPK 121

Query: 120 KVPVKTDWVMHEYHVKD 136
              +KTDW+MHEY + D
Sbjct: 122 G--IKTDWIMHEYRLHD 136

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7GCL7|NAC74_ORYSJ NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 8   GYKFQPSD-ELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G+ F P D ELI   LK+K       Y  I ++  I   EP DL  + +  ++D   +FF
Sbjct: 12  GFGFHPKDTELISHYLKKKIHGQKIEYEIIPEV-DIYKHEPWDLPAKCDVPTQDNKWHFF 70

Query: 67  YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTD 126
                KY N +R +R   AG+WK T +D  I+     IGTKK L F+   P +    +T+
Sbjct: 71  AARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTG--RRTE 128

Query: 127 WVMHEYHV 134
           W+MHEY++
Sbjct: 129 WIMHEYYI 136

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9ZVH0|FEZ_ARATH Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1

 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 8/135 (5%)

Query: 1   MESHMGQGYKFQPSDELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSED 60
           ME  +  G++F P+DE +VS   ++++  + L   +     I   +P DL   + T  ++
Sbjct: 12  MEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGEKE 71

Query: 61  RACYFFYEPR-YKYRNSNRVHRRAEAGHWKITSEDSQIEASNG--LIGTKKFLTFYRRSP 117
              ++FY PR  KYRNS+R +R   AG WK T  D  I +S G   IG KK L FY+   
Sbjct: 72  ---WYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRA 128

Query: 118 GSKVPVKTDWVMHEY 132
                VKTDW+MHE+
Sbjct: 129 AKG--VKTDWMMHEF 141

Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
449485756	196	PREDICTED: NAC transcription factor ONAC	0.916	0.673	0.385	7e-17
449435712	196	PREDICTED: NAC transcription factor ONAC	0.916	0.673	0.385	8e-17
224130712	329	NAC domain protein, IPR003441 [Populus t	0.888	0.389	0.375	1e-15
224063973	208	NAC domain protein, IPR003441 [Populus t	0.840	0.581	0.424	1e-15
296089037	335	unnamed protein product [Vitis vinifera]	0.826	0.355	0.419	2e-15
225453680	560	PREDICTED: uncharacterized protein LOC10	0.826	0.212	0.419	2e-15
356522462	497	PREDICTED: NAC domain-containing protein	0.875	0.253	0.402	4e-15
358346559	400	NAC domain protein [Medicago truncatula]	0.854	0.307	0.387	4e-15
224134092	226	NAC domain protein, IPR003441 [Populus t	0.868	0.553	0.380	6e-15
358346543	419	NAC domain protein [Medicago truncatula]	0.875	0.300	0.388	7e-15

>gi|449485756|ref|XP_004157266.1| PREDICTED: NAC transcription factor ONAC010-like [Cucumis sativus]

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 16/148 (10%)

Query: 8   GYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++F P+DE L    LK K +    L   I+ +  ICN EP +L + S   + D   +FF
Sbjct: 16  GFRFHPTDEELFNHYLKNKIVGRESLVQYIRQVD-ICNFEPWELPSLSNDQTGDHQWFFF 74

Query: 67  YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEA--SNGLIGTKKFLTFYRRSPGSKVP-- 122
               +KY N  R +R  + G+WK T +D QI A  +  LIGTKK L FY      +VP  
Sbjct: 75  SAQDFKYSNGRRSNRATKTGYWKSTGKDRQIMARVTKVLIGTKKTLVFY----SGRVPNG 130

Query: 123 VKTDWVMHEYHVKDDP------SYEVCA 144
           +KT+WV+HEYH+  DP      S+ +C 
Sbjct: 131 IKTNWVIHEYHLHPDPNLAQLKSFVICV 158

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435712|ref|XP_004135638.1| PREDICTED: NAC transcription factor ONAC010-like [Cucumis sativus]

 Score = 92.0 bits (227), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 16/148 (10%)

Query: 8   GYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++F P+DE L    LK K +    L   I+ +  ICN EP +L + S   + D   +FF
Sbjct: 16  GFRFHPTDEELFNHYLKNKIVGRESLVQYIRQVD-ICNFEPWELPSLSNDQTGDHQWFFF 74

Query: 67  YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEA--SNGLIGTKKFLTFYRRSPGSKVP-- 122
               +KY N  R +R  + G+WK T +D QI A  +  LIGTKK L FY      +VP  
Sbjct: 75  SAQDFKYSNGRRSNRATKTGYWKSTGKDRQIMARGTKVLIGTKKTLVFY----SGRVPNG 130

Query: 123 VKTDWVMHEYHVKDDP------SYEVCA 144
           +KT+WV+HEYH+  DP      S+ +C 
Sbjct: 131 IKTNWVIHEYHLHPDPNLAQLKSFVICV 158

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130712|ref|XP_002320909.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222861682|gb|EEE99224.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 5/133 (3%)

Query: 8   GYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           GY+F P++E L+ + LK K L        I  + H+C  EP +L  +S   S+D   YFF
Sbjct: 15  GYRFHPTNEELVCNYLKPKILGDEVEDLSIMPVVHVCKHEPSELPDKSNIKSKDAVWYFF 74

Query: 67  YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIE--ASNGLIGTKKFLTFYRRSPGSKVPVK 124
               +KY NS R +RR + G WK T ++ +I    +  +IGT+K L FY +S  S  P++
Sbjct: 75  CPRDFKYLNSGRYNRRTKLGFWKPTGKNLKIRFMGTKKVIGTRKTLVFYTKS--SPKPIR 132

Query: 125 TDWVMHEYHVKDD 137
           T W++HEY    D
Sbjct: 133 TGWIIHEYEYISD 145

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063973|ref|XP_002301328.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222843054|gb|EEE80601.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 74/132 (56%), Gaps = 11/132 (8%)

Query: 8   GYKFQPSDELIVS-LLKEKRLDPH-FLYGPIKDIGHICNLEPGDLATESETDSEDRACYF 65
           GY F P+DE +V+  LK K +  +  +   I ++ ++CN EP +L   S   S D  CYF
Sbjct: 14  GYGFHPTDEELVNHFLKLKMIGGYDHVVSTIAEV-NVCNYEPWELPGLSAIQSNDPECYF 72

Query: 66  FYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEA-SNG-LIGTKKFLTFYRRSPGSKVP- 122
           F  P YKY  S R +R   AG+WK T  D  I A S G  I TKK L FY      +VP 
Sbjct: 73  FSRPNYKYSKSQRANRTTGAGYWKGTGRDRTITAKSTGEQIATKKTLVFYN----GRVPN 128

Query: 123 -VKTDWVMHEYH 133
            V+T+W+MHEY+
Sbjct: 129 GVRTNWIMHEYN 140

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089037|emb|CBI38740.3| unnamed protein product [Vitis vinifera]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 12/131 (9%)

Query: 8   GYKFQPSDELIVS---LLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACY 64
           G++F P+DE +V     LK   ++ H    P  D+   C  EP DL   S   + D   +
Sbjct: 9   GFRFHPTDEELVDHYLKLKILGMNSHVDIIPEVDV---CKWEPWDLPVLSVIQTNDPEWF 65

Query: 65  FFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIE--ASNGLIGTKKFLTFYR-RSPGSKV 121
           FF  P YKY    R +R  EAG+WK T +D  I+  A+  L+GTKK L FYR R+P S  
Sbjct: 66  FFCPPDYKYPTGRRSNRATEAGYWKPTGKDRNIKSRATKELLGTKKTLVFYRGRAPQS-- 123

Query: 122 PVKTDWVMHEY 132
            V+T+WVMHEY
Sbjct: 124 -VRTNWVMHEY 133

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453680|ref|XP_002268892.1| PREDICTED: uncharacterized protein LOC100252386 [Vitis vinifera]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 12/131 (9%)

Query: 8   GYKFQPSDELIVS---LLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACY 64
           G++F P+DE +V     LK   ++ H    P  D+   C  EP DL   S   + D   +
Sbjct: 17  GFRFHPTDEELVDHYLKLKILGMNSHVDIIPEVDV---CKWEPWDLPVLSVIQTNDPEWF 73

Query: 65  FFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIE--ASNGLIGTKKFLTFYR-RSPGSKV 121
           FF  P YKY    R +R  EAG+WK T +D  I+  A+  L+GTKK L FYR R+P S  
Sbjct: 74  FFCPPDYKYPTGRRSNRATEAGYWKPTGKDRNIKSRATKELLGTKKTLVFYRGRAPQS-- 131

Query: 122 PVKTDWVMHEY 132
            V+T+WVMHEY
Sbjct: 132 -VRTNWVMHEY 141

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522462|ref|XP_003529865.1| PREDICTED: NAC domain-containing protein 69-like [Glycine max]

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 76/134 (56%), Gaps = 8/134 (5%)

Query: 4   HMGQGYKFQPSDELIVSL-LKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRA 62
           HM  G++F+P+DE +V+  LK K L   F    I +I  +C +EP D+   S   S+D  
Sbjct: 11  HMPVGFRFRPTDEELVNYYLKHKLLADDFPVHIIPEID-LCKVEPWDVPERSVIKSDDPE 69

Query: 63  CYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDS--QIEASNGLIGTKKFLTFYR-RSPGS 119
            +FF    YKY  S R +R  + G+WK T  D   +I  ++ +IGTKK L F+  R P  
Sbjct: 70  WFFFSPVDYKYLKSKRFNRTTKRGYWKTTGNDRNVKIPGTSNVIGTKKTLVFHEGRGPRG 129

Query: 120 KVPVKTDWVMHEYH 133
              VKT+WV+HEYH
Sbjct: 130 ---VKTNWVIHEYH 140

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346559|ref|XP_003637334.1| NAC domain protein [Medicago truncatula] gi|358346862|ref|XP_003637483.1| NAC domain protein [Medicago truncatula] gi|355503269|gb|AES84472.1| NAC domain protein [Medicago truncatula] gi|355503418|gb|AES84621.1| NAC domain protein [Medicago truncatula]

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 6/129 (4%)

Query: 8   GYKFQPSDELIVS-LLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++F+P+DE +V+  LK+K L    +   +     +C  EP DL   S   S D   +FF
Sbjct: 14  GFRFRPTDEELVNHYLKKKLLGNDSIVNNVIAEVDVCKFEPWDLPACSLIKSNDPEWFFF 73

Query: 67  YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIE--ASNGLIGTKKFLTFYRRSPGSKVPVK 124
               YKY NS R +RR + G+WK T  D +I+   ++ +IG KK L FY    G    VK
Sbjct: 74  CPRDYKYANSKRFNRRTQCGYWKATGLDRKIKVRGTDNVIGIKKTLVFYN---GCVPGVK 130

Query: 125 TDWVMHEYH 133
           ++WV+HEYH
Sbjct: 131 SNWVIHEYH 139

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134092|ref|XP_002321734.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222868730|gb|EEF05861.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 17/142 (11%)

Query: 8   GYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++FQP+DE L+   LK K L        I ++ ++C  +P +L  ++E +      YFF
Sbjct: 17  GFRFQPTDEELVFQYLKRKILSWPLPASVIHEV-NVCKYDPWELPGDTEQER-----YFF 70

Query: 67  YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEAS----NGLIGTKKFLTFYR--RSPGSK 120
                KY N NRV+R + +G+WK T  D QI +S    N ++G KK L FYR   + GS 
Sbjct: 71  SNKETKYPNGNRVNRSSASGYWKATGLDKQIISSSWKNNHVVGMKKTLVFYRGKATHGS- 129

Query: 121 VPVKTDWVMHEYHVKDDPSYEV 142
              +TDWVMHEY + ++ SY++
Sbjct: 130 ---RTDWVMHEYRLVNNSSYQL 148

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346543|ref|XP_003637326.1| NAC domain protein [Medicago truncatula] gi|355503261|gb|AES84464.1| NAC domain protein [Medicago truncatula]

 Score = 85.1 bits (209), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 8/134 (5%)

Query: 4   HMGQGYKFQPSDELIVS-LLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRA 62
           H+  G++F+P+DE +V+  LK+K L    +   +     +CN EP DL   S   S+D  
Sbjct: 11  HVPVGFRFRPTDEELVNHYLKKKLLGNDSIVNNVIAEVDVCNYEPWDLPAFSVVKSDDPE 70

Query: 63  CYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIE--ASNGLIGTKKFLTFYR-RSPGS 119
            +F     YKY  S R  R    G WK T +D +I+   SN +IG KK L +Y  R PG 
Sbjct: 71  WFFLCPIDYKYAKSKRFKRTTNTGFWKATGKDRKIKVRGSNNIIGIKKTLVYYNGRVPG- 129

Query: 120 KVPVKTDWVMHEYH 133
              VK+ WV+HEYH
Sbjct: 130 ---VKSSWVIHEYH 140

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
TAIR|locus:2167923	348	NAC101 "NAC-domain protein 101	0.923	0.382	0.366	1.6e-17
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.875	0.199	0.389	3.6e-17
TAIR|locus:2128013	534	NTL9 "NAC transcription factor	0.902	0.243	0.397	5.3e-17
TAIR|locus:2202028	395	NAC007 "NAC 007" [Arabidopsis	0.909	0.331	0.362	6.3e-17
TAIR|locus:2172334	335	ANAC087 "Arabidopsis NAC domai	0.881	0.379	0.375	8e-17
TAIR|locus:2089764	246	NAC057 "NAC domain containing	0.895	0.524	0.350	8.6e-17
TAIR|locus:2095007	314	NAC058 "NAC domain containing	0.895	0.410	0.364	8.6e-17
TAIR|locus:2164895	285	NAC6 "NAC domain containing pr	0.888	0.449	0.369	1.4e-16
TAIR|locus:2184342	567	NAC2 "NAC domain containing pr	0.895	0.227	0.348	1.7e-16
TAIR|locus:2179877	252	NAC083 "NAC domain containing	0.840	0.480	0.367	2.9e-16

TAIR|locus:2167923 NAC101 "NAC-domain protein 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 52/142 (36%), Positives = 73/142 (51%)

Query:     1 MES--HMGQGYKFQPSDELIVSL-LKEKRLDPHFLYGPIKDIGHICNLEPGDLATE-SET 56
             MES  H+  GY+F P+DE +V   LK K   P      IKD+  +  +EP D+       
Sbjct:     1 MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVD-LYKIEPWDIQELCGRG 59

Query:    57 DSEDRACYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-R 115
               E+R  YFF     KY    R +R   +G WK T  D  I +   L+G +K L FY+ R
Sbjct:    60 TGEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSKQELVGMRKTLVFYKGR 119

Query:   116 SPGSKVPVKTDWVMHEYHVKDD 137
             +P  +   K+DW+MHEY ++ D
Sbjct:   120 APNGQ---KSDWIMHEYRLETD 138

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP;RCA

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 3.6e-17, P = 3.6e-17
 Identities = 53/136 (38%), Positives = 81/136 (59%)

Query:     5 MGQGYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRAC 63
             M  G++F P+DE L++  LK K          I +I  +   EP DL  +S   S+D   
Sbjct:     6 MPPGFRFHPTDEELVIYYLKRKINGRTIELEIIPEID-LYKCEPWDLPGKSLLPSKDLE- 63

Query:    64 YFFYEPR-YKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-RSP-GSK 120
             +FF+ PR  KY N +R +R  +AG+WK T +D ++ + + ++GTKK L +YR R+P GS+
Sbjct:    64 WFFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVTSHSRMVGTKKTLVYYRGRAPHGSR 123

Query:   121 VPVKTDWVMHEYHVKD 136
                 TDWVMHEY +++
Sbjct:   124 ----TDWVMHEYRLEE 135

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2128013 NTL9 "NAC transcription factor-like 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 56/141 (39%), Positives = 83/141 (58%)

Query:     1 MESHMGQGYKFQPSDELIVS-LLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSE 59
             MES +  G++F+P+DE +V+  L+ K    H     I DI  +C  EP DL   S   ++
Sbjct:     6 MES-LPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDID-VCKWEPWDLPALSVIKTD 63

Query:    60 DRACYFFYEPR-YKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-RSP 117
             D   +FF+ PR  KY N +R +R  ++G+WK T +D  I++   LIG KK L FYR R+P
Sbjct:    64 DPE-WFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKTLIGMKKTLVFYRGRAP 122

Query:   118 GSKVPVKTDWVMHEYH--VKD 136
               +   +T+W+MHEY   +KD
Sbjct:   123 KGE---RTNWIMHEYRPTLKD 140

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0031347 "regulation of defense response" evidence=IMP

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0008284 "positive regulation of cell proliferation" evidence=RCA

TAIR|locus:2202028 NAC007 "NAC 007" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 6.3e-17, P = 6.3e-17
 Identities = 50/138 (36%), Positives = 74/138 (53%)

Query:     3 SHMGQGYKFQPSDELIVSL-LKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDR 61
             SH+  G++F P+DE +V   L++K          IKDI  +  +EP DL    +   E++
Sbjct:     5 SHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDID-LYKIEPWDLQELCKIGHEEQ 63

Query:    62 A-CYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-RSPGS 119
             +  YFF     KY    R +R  +AG WK T  D  I   + LIG +K L FY+ R+P  
Sbjct:    64 SDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNG 123

Query:   120 KVPVKTDWVMHEYHVKDD 137
             +   K+DW+MHEY ++ D
Sbjct:   124 Q---KSDWIMHEYRLETD 138

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2172334 ANAC087 "Arabidopsis NAC domain containing protein 87" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 8.0e-17, P = 8.0e-17
 Identities = 51/136 (37%), Positives = 76/136 (55%)

Query:     8 GYKFQPSDELIVSL-LKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
             G++F P+DE I++  LKEK L+  F    + +   +   EP DL   ++   ++   YFF
Sbjct:    24 GFRFHPTDEEIITCYLKEKVLNSRFTAVAMGE-ADLNKCEPWDLPKRAKMGEKE--FYFF 80

Query:    67 YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNG-LIGTKKFLTFYR-RSPGSKVPVK 124
              +   KY    R +R  E+G+WK T +D +I    G L+G KK L FYR R+P  +   K
Sbjct:    81 CQRDRKYPTGMRTNRATESGYWKATGKDKEIFKGKGCLVGMKKTLVFYRGRAPKGE---K 137

Query:   125 TDWVMHEYHVKDDPSY 140
             T+WVMHEY ++   SY
Sbjct:   138 TNWVMHEYRLEGKYSY 153

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

TAIR|locus:2089764 NAC057 "NAC domain containing protein 57" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 48/137 (35%), Positives = 74/137 (54%)

Query:     8 GYKFQPSDELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFFY 67
             G++F P+DE +V+   +++++   +   I     +   EP DLA +S   S D   YFF 
Sbjct:     9 GFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWDLAEKSFLPSRDPEWYFFG 68

Query:    68 EPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-RSPGSKVPVKTD 126
                 KY N  R +R    G+WK T +D ++ + +  IG KK L +Y+ R+P     ++TD
Sbjct:    69 PRDRKYPNGFRTNRATRGGYWKSTGKDRRVTSQSRAIGMKKTLVYYKGRAPQG---IRTD 125

Query:   127 WVMHEYHVKD----DPS 139
             WVMHEY + D    DPS
Sbjct:   126 WVMHEYRLDDKDCDDPS 142

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2095007 NAC058 "NAC domain containing protein 58" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 50/137 (36%), Positives = 75/137 (54%)

Query:     1 MESHMGQGYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSE 59
             ME ++  G++F P+DE LI   L  K  D  F    + D+  +   EP DL  ++    +
Sbjct:     1 MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVD-LNKCEPWDLPAKASMGEK 59

Query:    60 DRACYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-RSPG 118
             +   YFF +   KY    R +R  EAG+WK T +D +I  S  L+G KK L FY+ R+P 
Sbjct:    60 E--WYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGVLVGMKKTLVFYKGRAPK 117

Query:   119 SKVPVKTDWVMHEYHVK 135
              +   K++WVMHEY ++
Sbjct:   118 GE---KSNWVMHEYRLE 131

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2164895 NAC6 "NAC domain containing protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 51/138 (36%), Positives = 75/138 (54%)

Query:     2 ESHMG--QGYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDS 58
             E H+    G++F P+DE LI   LK K  +  F    I ++  +  +EP DL  +++   
Sbjct:    15 EEHIDLPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEVD-LNKIEPWDLPWKAKMGE 73

Query:    59 EDRACYFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-RSP 117
             ++   YFF     KY    R +R  EAG+WK T +D +I     L+G KK L FY+ R+P
Sbjct:    74 KE--WYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAP 131

Query:   118 GSKVPVKTDWVMHEYHVK 135
                  VKT+WVMHEY ++
Sbjct:   132 KG---VKTNWVMHEYRLE 146

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IPI

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0010150 "leaf senescence" evidence=IEP;IMP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0010468 "regulation of gene expression" evidence=IMP

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009743 "response to carbohydrate stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2184342 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 1.7e-16, P = 1.7e-16
 Identities = 47/135 (34%), Positives = 75/135 (55%)

Query:     5 MGQGYKFQPSDELIVSL-LKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRAC 63
             +  G++F P+DE +V   LK K  +  F +  I  +  I   EP DL  +S+  S D   
Sbjct:     9 LAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAIS-VTDIYKSEPWDLPDKSKLKSRDLEW 67

Query:    64 YFFYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-RSPGSKVP 122
             YFF     KY N ++ +R  E G+WK T +D +I   + ++G KK L +++ R+P  +  
Sbjct:    68 YFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGE-- 125

Query:   123 VKTDWVMHEYHVKDD 137
              +T+WVMHEY + D+
Sbjct:   126 -RTNWVMHEYRLSDE 139

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009962 "regulation of flavonoid biosynthetic process" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2179877 NAC083 "NAC domain containing protein 83" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 50/136 (36%), Positives = 70/136 (51%)

Query:     8 GYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
             G++F P+DE L+V  LK K          I +   +C  +P DL    E   ++R  YFF
Sbjct:    17 GFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFD-VCRADPWDLPGNLE---KER--YFF 70

Query:    67 YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNG--LIGTKKFLTFYRRSP--GSKVP 122
                  KY N NR +R   +G+WK T  D ++  S G  ++G KK L FY+  P  GS+  
Sbjct:    71 STREAKYPNGNRSNRATGSGYWKATGIDKRVVTSRGNQIVGLKKTLVFYKGKPPHGSR-- 128

Query:   123 VKTDWVMHEYHVKDDP 138
               TDW+MHEY +   P
Sbjct:   129 --TDWIMHEYRLSSSP 142

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010150 "leaf senescence" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	144
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	3e-31

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  108 bits (271), Expect = 3e-31
 Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 7/129 (5%)

Query: 8   GYKFQPSD-ELIVSLLKEKRLD-PHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYF 65
           G++F P+D EL+V  LK K L  P  L   I ++  I   EP DL  + +    DR  YF
Sbjct: 4   GFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVD-IYKFEPWDLP-DGKAKGGDREWYF 61

Query: 66  FYEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNG-LIGTKKFLTFYRRSPGSKVPVK 124
           F     KY N +R +R   +G+WK T +D  + +  G ++G KK L FY+         K
Sbjct: 62  FSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPK--GEK 119

Query: 125 TDWVMHEYH 133
           TDWVMHEY 
Sbjct: 120 TDWVMHEYR 128

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	144
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=3.4e-47  Score=270.29  Aligned_cols=126  Identities=35%  Similarity=0.617  Sum_probs=95.1

Q ss_pred             CCCCceEcCCHH-HHHHHHhhhhCCCCCCC-CCeeccCCCCCCCCCCccccccCCCCCCeEEEEecccccccCCCccccc
Q 032247            5 MGQGYKFQPSDE-LIVSLLKEKRLDPHFLY-GPIKDIGHICNLEPGDLATESETDSEDRACYFFYEPRYKYRNSNRVHRR   82 (144)
Q Consensus         5 lp~G~rF~Ptde-Li~~YL~~k~~g~~l~~-~~I~~~~Dvy~~~P~~L~~~~~~~~~~~~~yFF~~~~~~~~~g~r~~r~   82 (144)
                      |||||||+|||+ ||.+||.+|+.|.+++. ++|+++ |||++|||+|+...  .+++.+||||+++++++.+++|.+|+
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~-Diy~~~P~~L~~~~--~~~~~~~yFF~~~~~~~~~~~r~~R~   77 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDV-DIYSAHPWELPAKF--KGGDEEWYFFSPRKKKYPNGGRPNRV   77 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE---GGGS-GGGCHHHS--SS-SSEEEEEEE----------S-EE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeec-ccCccChHHhhhhc--cCCCceEEEEEecccccCCccccccc
Confidence            899999999999 99999999999999887 799999 99999999999422  23667999999999999999999999


Q ss_pred             ccCceeEeecCCceEee-CCcEEEEEEEEEEEecCCCCCCCcCCCeEEEEEEeC
Q 032247           83 AEAGHWKITSEDSQIEA-SNGLIGTKKFLTFYRRSPGSKVPVKTDWVMHEYHVK  135 (144)
Q Consensus        83 ~~~G~W~~~g~~~~i~~-~g~~vG~k~~l~f~~~~~~~~~~~~t~W~M~EY~l~  135 (144)
                      +++|+||++|+.++|.+ ++.+||+|++|+||.++.+++  .+|+|+||||+|.
T Consensus        78 ~~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~--~kt~W~M~EY~L~  129 (129)
T PF02365_consen   78 TGGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNG--KKTGWVMHEYSLE  129 (129)
T ss_dssp             ETTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS---EEEEEEEEEEEE-
T ss_pred             ccceEEeecccccccccccceeeeeEEEEEEEeccCCCC--CcCCeEEEEEEeC
Confidence            99999999999999999 699999999999998877666  8999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	144
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		4e-12
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		2e-10
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-10

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 2   ESHMGQGYKFQPSDELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDR 61
           E ++  G++F P+D+ +V     ++     L  PI     +   +P DL   +   + + 
Sbjct: 12  ELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGARE- 70
Query: 62  ACYFFYEPR-YKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSK 120
             ++F+ PR  KY N +R +R A  G+WK T  D  +      +G KK L FY      K
Sbjct: 71  --WYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFY----AGK 124
Query: 121 VP--VKTDWVMHEYHV 134
            P  VKTDW+MHEY +
Sbjct: 125 APRGVKTDWIMHEYRL 140

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 8   GYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++F P+DE L+V  L  K     F    I +I  +   +P  L  ++    ++   ++F
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALFGEKE---WYF 75
Query: 67  YEPR-YKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVP--V 123
           + PR  KY N +R +R A +G+WK T  D  I      +G KK L FY      K P   
Sbjct: 76  FSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYI----GKAPKGT 131
Query: 124 KTDWVMHEYHV 134
           KT+W+MHEY +
Sbjct: 132 KTNWIMHEYRL 142

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 8   GYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++F P+DE L+V  L  K     F    I +I  +   +P  L  ++    ++   ++F
Sbjct: 23  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALFGEKE---WYF 78
Query: 67  YEPR-YKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVP--V 123
           + PR  KY N +R +R A +G+WK T  D  I      +G KK L FY      K P   
Sbjct: 79  FSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYI----GKAPKGT 134
Query: 124 KTDWVMHEYHV 134
           KT+W+MHEY +
Sbjct: 135 KTNWIMHEYRL 145

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	144
1ut7_A	171	No apical meristem protein; transcription regulati	8e-34
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	3e-33

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  115 bits (290), Expect = 8e-34
 Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 8/134 (5%)

Query: 8   GYKFQPSD-ELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++F P+D EL+V  L  K     F    I +I  +   +P  L  ++     ++  YFF
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKAL--FGEKEWYFF 76

Query: 67  YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYR-RSPGSKVPVKT 125
                KY N +R +R A +G+WK T  D  I      +G KK L FY  ++P      KT
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG---TKT 133

Query: 126 DWVMHEYHVKDDPS 139
           +W+MHEY + +   
Sbjct: 134 NWIMHEYRLIEPSR 147

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  113 bits (286), Expect = 3e-33
 Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 6/133 (4%)

Query: 8   GYKFQPSD-ELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++F P+D EL+   L  K          I ++  +   +P DL   +   + +   YFF
Sbjct: 18  GFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEV-DLYKFDPWDLPERALFGAREW--YFF 74

Query: 67  YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTD 126
                KY N +R +R A  G+WK T  D  +      +G KK L FY         VKTD
Sbjct: 75  TPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPR--GVKTD 132

Query: 127 WVMHEYHVKDDPS 139
           W+MHEY + D   
Sbjct: 133 WIMHEYRLADAGR 145

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	144
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=3.2e-55  Score=324.13  Aligned_cols=138  Identities=32%  Similarity=0.598  Sum_probs=124.3

Q ss_pred             CCCCCCCceEcCCHH-HHHHHHhhhhCCCCCCCCCeeccCCCCCCCCCCccccccCCCCCCeEEEEecccccccCCCccc
Q 032247            2 ESHMGQGYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFFYEPRYKYRNSNRVH   80 (144)
Q Consensus         2 ~~~lp~G~rF~Ptde-Li~~YL~~k~~g~~l~~~~I~~~~Dvy~~~P~~L~~~~~~~~~~~~~yFF~~~~~~~~~g~r~~   80 (144)
                      ++.|||||||+|||| ||.+||++|+.|.+++..+|+++ |||.+|||+||+....  ++.+||||+++.+|+++|.|.+
T Consensus        12 ~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~ev-Dvy~~~Pw~Lp~~~~~--g~~ewYFFs~r~~ky~~g~R~n   88 (174)
T 3ulx_A           12 ELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEV-DLYKFDPWDLPERALF--GAREWYFFTPRDRKYPNGSRPN   88 (174)
T ss_dssp             TTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEEC-CGGGSCGGGSGGGCSS--CSSEEEEEEECCC-----CCSC
T ss_pred             ccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeec-ccccCCchhhhhhhcc--CCceEEEEeccccccCCCCCce
Confidence            468999999999999 99999999999999999999999 9999999999998763  5689999999999999999999


Q ss_pred             ccccCceeEeecCCceEeeCCcEEEEEEEEEEEecCCCCCCCcCCCeEEEEEEeCCC--------------CCeeecC
Q 032247           81 RRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTDWVMHEYHVKDD--------------PSYEVCA  144 (144)
Q Consensus        81 r~~~~G~W~~~g~~~~i~~~g~~vG~k~~l~f~~~~~~~~~~~~t~W~M~EY~l~~~--------------~~~vlC~  144 (144)
                      |++++|+||++|++++|.++|.+||+|++|+||.++.+++  .+|+|+||||+|.++              +++|||+
T Consensus        89 R~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g--~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCr  164 (174)
T 3ulx_A           89 RAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG--VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCR  164 (174)
T ss_dssp             EEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSC--EEEEEEEEEEEECSCC-----------CCSSEEEEE
T ss_pred             eecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCC--CcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEE
Confidence            9999999999999999998899999999999999999888  999999999999864              2599996

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=7.2e-55  Score=321.87  Aligned_cols=138  Identities=31%  Similarity=0.568  Sum_probs=122.9

Q ss_pred             CCCCCCCceEcCCHH-HHHHHHhhhhCCCCCCCCCeeccCCCCCCCCCCccccccCCCCCCeEEEEecccccccCCCccc
Q 032247            2 ESHMGQGYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFFYEPRYKYRNSNRVH   80 (144)
Q Consensus         2 ~~~lp~G~rF~Ptde-Li~~YL~~k~~g~~l~~~~I~~~~Dvy~~~P~~L~~~~~~~~~~~~~yFF~~~~~~~~~g~r~~   80 (144)
                      ++.|||||||+|||| ||.+||++|+.|.+++..+|+++ |||.+|||+||+....  ++.+||||+++.+++++|.|.+
T Consensus        14 ~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~-Diy~~~Pw~Lp~~~~~--g~~ewyFFs~r~~k~~~g~R~~   90 (171)
T 1ut7_A           14 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALF--GEKEWYFFSPRDRKYPNGSRPN   90 (171)
T ss_dssp             SSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEEC-CGGGSCGGGHHHHSSS--CSSEEEEEEECCC-------CC
T ss_pred             ccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeec-ccccCChhHhhchhhc--CCccEEEEeccccccCCCCccc
Confidence            467999999999999 99999999999999999999999 9999999999998653  5789999999999999999999


Q ss_pred             ccccCceeEeecCCceEeeCCcEEEEEEEEEEEecCCCCCCCcCCCeEEEEEEeCCC---------CCeeecC
Q 032247           81 RRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTDWVMHEYHVKDD---------PSYEVCA  144 (144)
Q Consensus        81 r~~~~G~W~~~g~~~~i~~~g~~vG~k~~l~f~~~~~~~~~~~~t~W~M~EY~l~~~---------~~~vlC~  144 (144)
                      |++++|+||++|++++|.+++.+||+|++|+||.++.+++  .+|+|+||||+|.+.         .++|||+
T Consensus        91 R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g--~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCr  161 (171)
T 1ut7_A           91 RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG--TKTNWIMHEYRLIEPSRRNGSTKLDDWVLCR  161 (171)
T ss_dssp             EEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSC--EEEEEEEEEEEECCCC--------CCEEEEE
T ss_pred             ccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCC--CcCCeEEEEEEcCCCccccCcccCCCEEEEE
Confidence            9999999999999999999899999999999999999888  999999999999865         3699996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	144
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	5e-25

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 91.6 bits (227), Expect = 5e-25
 Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 8   GYKFQPSD-ELIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFF 66
           G++F P+D EL+V  L  K     F    I +I  +   +P  L  ++     ++  YFF
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKA--LFGEKEWYFF 76

Query: 67  YEPRYKYRNSNRVHRRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTD 126
                KY N +R +R A +G+WK T  D  I      +G KK L FY          KT+
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPK--GTKTN 134

Query: 127 WVMHEYHVKDDPS 139
           W+MHEY + +   
Sbjct: 135 WIMHEYRLIEPSR 147

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	144
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-53  Score=313.10  Aligned_cols=138  Identities=31%  Similarity=0.570  Sum_probs=122.5

Q ss_pred             CCCCCCCceEcCCHH-HHHHHHhhhhCCCCCCCCCeeccCCCCCCCCCCccccccCCCCCCeEEEEecccccccCCCccc
Q 032247            2 ESHMGQGYKFQPSDE-LIVSLLKEKRLDPHFLYGPIKDIGHICNLEPGDLATESETDSEDRACYFFYEPRYKYRNSNRVH   80 (144)
Q Consensus         2 ~~~lp~G~rF~Ptde-Li~~YL~~k~~g~~l~~~~I~~~~Dvy~~~P~~L~~~~~~~~~~~~~yFF~~~~~~~~~g~r~~   80 (144)
                      +++|||||||+|||| ||.+||.+|+.|.|++.++|+++ |||++|||+||+....  ++++||||+++.++++++.|.+
T Consensus        14 ~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~-Dvy~~~Pw~Lp~~~~~--~~~~wyFft~~~~k~~~g~r~~   90 (166)
T d1ut7a_          14 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALF--GEKEWYFFSPRDRKYPNGSRPN   90 (166)
T ss_dssp             SSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEEC-CGGGSCGGGHHHHSSS--CSSEEEEEEECCC-------CC
T ss_pred             cccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceec-cCCcCChhhccchhcc--CcceEEEEeeeccccCCCCccc
Confidence            688999999999999 99999999999999999999999 9999999999987653  5788999999999999999999


Q ss_pred             ccccCceeEeecCCceEeeCCcEEEEEEEEEEEecCCCCCCCcCCCeEEEEEEeCCCC---------CeeecC
Q 032247           81 RRAEAGHWKITSEDSQIEASNGLIGTKKFLTFYRRSPGSKVPVKTDWVMHEYHVKDDP---------SYEVCA  144 (144)
Q Consensus        81 r~~~~G~W~~~g~~~~i~~~g~~vG~k~~l~f~~~~~~~~~~~~t~W~M~EY~l~~~~---------~~vlC~  144 (144)
                      |++++|+||++|+++.|.++|.+||+|++|+||+++.+++  .+|+|+||||+|.+..         ++|||+
T Consensus        91 R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~--~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCr  161 (166)
T d1ut7a_          91 RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG--TKTNWIMHEYRLIEPSRRNGSTKLDDWVLCR  161 (166)
T ss_dssp             EEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSC--EEEEEEEEEEEECCCC--------CCEEEEE
T ss_pred             cccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCC--CccCeEEEEEecCCcccccCccccCCEEEEE
Confidence            9999999999999999998899999999999999999888  9999999999998753         589996