Citrus Sinensis ID: 032308

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
Protein Sequence
MLSRIRQALQWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccccccccEEEEEccccccccccccccEEEEEccccccccccccccEEEEEEEccccccccccccccEEEccHHHHHHHHcccccEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccEEEEEcHHHcccccccccEEEEEEEccccccccccccEEEEEEEccccccccccccccccccccHHHHHHHHcccccEEEEEEEEc
Coil and Loop (DISEMBL)
MLSRIRQALQWLSFLLFISQLICntsfadvgtaarygppflpttcygndptqfpssnlfaaagdgiwdngascgRQYLVRCisasepgtcepeqtIQIRIVDYAlqlestpsvsgttiVLSETAFRTIANSTATLINVEFQQV
Flexible Loop (DISEMBL)
MLSRIRQALQWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISAsepgtcepeqtIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV
Low Complexity Region (SEG)
MLSRIRQALQWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV
Disordered region (IsUnstruct)
*****RQALQWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVE****
Disordered Region (DISOPRED)
*********QWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV
Disordered Region (DISEMBL)
MLSRIRQALQWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV
Disordered Region (DISPRO)
*LSRIRQALQWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLSRIRQALQWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	143	2.2.26 [Sep-21-2011]
Q9ZP41	131	EG45-like domain containi	N/A	no	0.769	0.839	0.373	2e-13
Q9ZV52	130	EG45-like domain containi	yes	no	0.867	0.953	0.304	3e-11
Q9M0C2	123	Putative EG45-like domain	no	no	0.517	0.601	0.356	2e-08

>sp|Q9ZP41|EGC_CITJA EG45-like domain containing protein OS=Citrus jambhiri GN=CjBAp12 PE=1 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 16/126 (12%)

Query: 21  LICNTSFADVGTAARYGPPFLPTTC--YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYL 78
           LI + ++A  GTA  Y PP++P+ C  Y ND        + AAA   IW+NGA C + + 
Sbjct: 17  LISSAAYASEGTATFYTPPYVPSACNGYKNDGV------MIAAASYAIWNNGAVCNKSFR 70

Query: 79  VRCISASEPGTCEPEQ--TIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLI 136
           V+C  A+  GT  P +  ++ ++IVD        P+    TI LS+ AF  IAN  A  I
Sbjct: 71  VKCTGATNQGTPHPCRGGSVLVKIVDLC------PAGCQATIDLSQEAFSQIANPDAGKI 124

Query: 137 NVEFQQ 142
            +EF Q
Sbjct: 125 KIEFNQ 130

Might have a systemic role in water and solute homeostasis. Has no expansin-like activity.
Citrus jambhiri (taxid: 64884)

>sp|Q9ZV52|EGC2_ARATH EG45-like domain containing protein 2 OS=Arabidopsis thaliana GN=EGC2 PE=2 SV=2

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 14/138 (10%)

Query: 5   IRQALQWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGD 64
           I+ A++++  ++  +Q++   + A  G A  Y PP+  + CYG   TQ     L     +
Sbjct: 2   IKMAVKFVVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYG---TQ--RETLVVGVKN 56

Query: 65  GIWDNGASCGRQYLVRCISASE--PGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSE 122
            +W NG +CGR+Y VRCI A+      C   +T+ +++VD+  +           + LS 
Sbjct: 57  NLWQNGRACGRRYRVRCIGATYNFDRACT-GRTVDVKVVDFCREP------CNGDLNLSR 109

Query: 123 TAFRTIANSTATLINVEF 140
            AFR IAN+ A  I V +
Sbjct: 110 DAFRVIANTDAGNIRVVY 127

Plays a systemic role in water and solute homeostasis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0C2|EGC1_ARATH Putative EG45-like domain containing protein 1 OS=Arabidopsis thaliana GN=EGC1 PE=3 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 13/87 (14%)

Query: 58  LFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPE----QTIQIRIVDYALQLESTPSV 113
           + AAA D +WDNG  CG+ + V+C   S P    P     ++++++IVD+       PS 
Sbjct: 44  MIAAASDTLWDNGRVCGKMFTVKC---SGPRNAVPHPCTGKSVKVKIVDHC------PSG 94

Query: 114 SGTTIVLSETAFRTIANSTATLINVEF 140
             +T+ LS  AF  IAN  A +IN+++
Sbjct: 95  CASTLDLSREAFAQIANPVAGIINIDY 121

Might have a systemic role in water and solute homeostasis.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
225445398	144	PREDICTED: EG45-like domain containing p	0.979	0.972	0.713	2e-50
255576970	189	conserved hypothetical protein [Ricinus	0.902	0.682	0.689	8e-47
351723313	144	uncharacterized protein LOC100306194 pre	0.895	0.888	0.676	4e-45
356515476	140	PREDICTED: EG45-like domain containing p	0.979	1.0	0.640	5e-45
351724325	144	uncharacterized protein LOC100306489 pre	0.993	0.986	0.631	8e-45
224143084	157	predicted protein [Populus trichocarpa]	0.818	0.745	0.675	1e-39
224091381	151	predicted protein [Populus trichocarpa]	0.825	0.781	0.677	3e-39
449443119	148	PREDICTED: EG45-like domain containing p	0.993	0.959	0.550	4e-39
359476094	266	PREDICTED: uncharacterized protein LOC10	0.811	0.436	0.663	7e-39
224092422	139	predicted protein [Populus trichocarpa]	0.818	0.841	0.666	2e-38

>gi|225445398|ref|XP_002284999.1| PREDICTED: EG45-like domain containing protein-like isoform 3 [Vitis vinifera] gi|225445400|ref|XP_002284997.1| PREDICTED: EG45-like domain containing protein-like isoform 2 [Vitis vinifera] gi|225445402|ref|XP_002284996.1| PREDICTED: EG45-like domain containing protein-like isoform 1 [Vitis vinifera]

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 102/143 (71%), Positives = 115/143 (80%), Gaps = 3/143 (2%)

Query: 4   RIRQALQWLSFLL---FISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFA 60
           RI + L+   FLL   FIS    N+   DVGTAA+Y PP+LPT CYGND ++FPSSNLFA
Sbjct: 2   RIIETLRCCLFLLDFLFISVFFINSCQGDVGTAAQYNPPYLPTICYGNDASEFPSSNLFA 61

Query: 61  AAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVL 120
           AAGDGIWDNGASCGRQYLVRCISA++PGTC P+QTIQI++VDYA    STPS  GTTIVL
Sbjct: 62  AAGDGIWDNGASCGRQYLVRCISATQPGTCVPDQTIQIKVVDYAPSAPSTPSADGTTIVL 121

Query: 121 SETAFRTIANSTATLINVEFQQV 143
           SETAF  IANSTAT IN+EFQQV
Sbjct: 122 SETAFGIIANSTATAINIEFQQV 144

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576970|ref|XP_002529370.1| conserved hypothetical protein [Ricinus communis] gi|223531190|gb|EEF33037.1| conserved hypothetical protein [Ricinus communis]

 Score =  191 bits (485), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 89/129 (68%), Positives = 106/129 (82%)

Query: 14  FLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASC 73
           F  F+  L+ +TS  DVGTA++Y PP+LPTTCY ND +QFP +NLFAAAGDGIWDNGASC
Sbjct: 17  FTFFLISLLLSTSHGDVGTASQYSPPYLPTTCYDNDASQFPPNNLFAAAGDGIWDNGASC 76

Query: 74  GRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTA 133
           GR+YLVRCISAS  G+C+P+QTIQ++IVDYA      PS SGTTI+LSETAF  IANS+A
Sbjct: 77  GREYLVRCISASVAGSCQPDQTIQVKIVDYAFSTPIPPSASGTTIILSETAFGIIANSSA 136

Query: 134 TLINVEFQQ 142
           T IN+EFQQ
Sbjct: 137 TSINIEFQQ 145

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723313|ref|NP_001235227.1| uncharacterized protein LOC100306194 precursor [Glycine max] gi|255627831|gb|ACU14260.1| unknown [Glycine max]

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 88/130 (67%), Positives = 106/130 (81%), Gaps = 2/130 (1%)

Query: 14  FLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASC 73
           F+ FI  ++ + S ADVGTA+RY PP+LP+ CYG + TQFPSSNLFAAAGDGIWDNGA+C
Sbjct: 17  FIFFI--VLLHHSNADVGTASRYSPPYLPSGCYGTEATQFPSSNLFAAAGDGIWDNGAAC 74

Query: 74  GRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTA 133
           GRQYLVRCISA +P TC P+Q+IQI+IVDYA    S  S  GTT+VLS+ AF TIAN++A
Sbjct: 75  GRQYLVRCISAEQPRTCIPDQSIQIKIVDYAATAVSPASAGGTTMVLSDKAFGTIANTSA 134

Query: 134 TLINVEFQQV 143
            LIN+EFQQV
Sbjct: 135 ALINIEFQQV 144

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515476|ref|XP_003526426.1| PREDICTED: EG45-like domain containing protein-like [Glycine max]

 Score =  185 bits (470), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 111/142 (78%), Gaps = 2/142 (1%)

Query: 2   LSRIRQALQWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAA 61
           +S++R  L   S  L +S L  + S ADVGTAA+YGPPFLPTTC+G D +QFPSSN+FAA
Sbjct: 1   MSKVR--LLNFSHGLILSTLFIHYSLADVGTAAQYGPPFLPTTCFGRDASQFPSSNMFAA 58

Query: 62  AGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLS 121
           AG+GIWDNGA+CGRQY VRCISA+ P TC P QTIQI+IVD A    S PS+ GT++VLS
Sbjct: 59  AGEGIWDNGAACGRQYQVRCISAAAPRTCVPGQTIQIKIVDRAQSSVSRPSLGGTSMVLS 118

Query: 122 ETAFRTIANSTATLINVEFQQV 143
            TAF+ IAN +A+ IN+EFQQV
Sbjct: 119 VTAFQAIANVSASFINIEFQQV 140

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724325|ref|NP_001235774.1| uncharacterized protein LOC100306489 precursor [Glycine max] gi|255628697|gb|ACU14693.1| unknown [Glycine max]

 Score =  184 bits (468), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 91/144 (63%), Positives = 110/144 (76%), Gaps = 2/144 (1%)

Query: 2   LSRIRQA--LQWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLF 59
           +S+I  A  L   S L  +  ++ + S ADVGTA+RY PP+LP+ CYG + TQFPSSNLF
Sbjct: 1   MSKIMSAPTLHHFSSLFTLFIVLLHHSNADVGTASRYSPPYLPSGCYGTEATQFPSSNLF 60

Query: 60  AAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIV 119
           AAAGDGIWDNGA+CGRQYLVRCISA +P TC P+Q+IQI+IVDYA    S  S  GTT+V
Sbjct: 61  AAAGDGIWDNGAACGRQYLVRCISAEQPRTCIPDQSIQIKIVDYAATAVSPASAGGTTMV 120

Query: 120 LSETAFRTIANSTATLINVEFQQV 143
           LS+ AF TIAN +ATLIN+E QQV
Sbjct: 121 LSDKAFGTIANMSATLINIELQQV 144

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143084|ref|XP_002324844.1| predicted protein [Populus trichocarpa] gi|222866278|gb|EEF03409.1| predicted protein [Populus trichocarpa]

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/117 (67%), Positives = 92/117 (78%)

Query: 26  SFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISAS 85
           S  DVGT + Y PP+LPT CYGN  + FPSSNLFAAAG+GIWDNGA+CGRQYLVRCISA+
Sbjct: 23  SHGDVGTCSHYRPPYLPTACYGNSSSHFPSSNLFAAAGEGIWDNGAACGRQYLVRCISAA 82

Query: 86  EPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQ 142
            P TC P+Q IQ+RIVD A    S PS +G TIVLS TAF +IA+ +A L+NVEFQQ
Sbjct: 83  VPRTCLPDQIIQVRIVDRAQTSRSRPSSNGATIVLSSTAFGSIADPSARLVNVEFQQ 139

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091381|ref|XP_002309240.1| predicted protein [Populus trichocarpa] gi|222855216|gb|EEE92763.1| predicted protein [Populus trichocarpa]

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 82/121 (67%), Positives = 98/121 (80%), Gaps = 3/121 (2%)

Query: 25  TSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISA 84
           TS  DVGTAA+Y PP+LPT CY +  +QFPS+N+FAAAGDGIWDNGA+CGRQYLVRCISA
Sbjct: 31  TSQGDVGTAAQYSPPYLPTACYNDSASQFPSNNMFAAAGDGIWDNGAACGRQYLVRCISA 90

Query: 85  SEPGTCEPEQTIQIRIVDYALQL-ESTPSVSGTTIVLSETAFRTIANSTA--TLINVEFQ 141
           +   +C  +Q IQ++IVDYAL L  + PS SGTTIVLSETAF  IAN++A  T IN+EFQ
Sbjct: 91  AVADSCIADQVIQVKIVDYALALINNPPSASGTTIVLSETAFGAIANNSAAPTSINLEFQ 150

Query: 142 Q 142
           Q
Sbjct: 151 Q 151

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443119|ref|XP_004139328.1| PREDICTED: EG45-like domain containing protein 2-like isoform 1 [Cucumis sativus] gi|449443121|ref|XP_004139329.1| PREDICTED: EG45-like domain containing protein 2-like isoform 2 [Cucumis sativus] gi|449509459|ref|XP_004163595.1| PREDICTED: EG45-like domain containing protein 2-like isoform 1 [Cucumis sativus] gi|449509463|ref|XP_004163596.1| PREDICTED: EG45-like domain containing protein 2-like isoform 2 [Cucumis sativus]

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 82/149 (55%), Positives = 106/149 (71%), Gaps = 7/149 (4%)

Query: 1   MLSRIRQALQW----LSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSS 56
           ML R +  LQW      F LFIS L+ + S  DVGTAA+Y PP+ PT C+G D +QFP++
Sbjct: 1   MLIREKPLLQWQQLCFVFFLFIS-LLLHFSHGDVGTAAKYPPPYSPTACFGGDLSQFPTN 59

Query: 57  NLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGT 116
           N+FAAA DGIW+NGA+CGRQY VRC SASEP  C  +QT+QI IVD+   + STP+  GT
Sbjct: 60  NMFAAAADGIWENGAACGRQYFVRCFSASEPEACVADQTVQITIVDHTESIVSTPTARGT 119

Query: 117 TIVLSETAFRTIANSTATL--INVEFQQV 143
           T+ LS TA++ I NS+AT+  + +EF QV
Sbjct: 120 TMTLSSTAYKAIVNSSATVQFVTIEFLQV 148

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476094|ref|XP_002282215.2| PREDICTED: uncharacterized protein LOC100259398 [Vitis vinifera]

 Score =  165 bits (417), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 77/116 (66%), Positives = 93/116 (80%)

Query: 28  ADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEP 87
            DVGTA +Y PP+LPT CYGND ++FPSSN FA+AG+GIWDNGA+CGRQYLVRCISA  P
Sbjct: 151 GDVGTAGQYAPPYLPTACYGNDVSEFPSSNFFASAGEGIWDNGAACGRQYLVRCISAVVP 210

Query: 88  GTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV 143
            TC   QTIQI+IVD A+   S PS +G T+VLS TAF  +AN++A+ IN+EFQQV
Sbjct: 211 MTCIAGQTIQIKIVDRAVTSVSRPSRNGATMVLSTTAFGAVANASASSINIEFQQV 266

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092422|ref|XP_002309602.1| predicted protein [Populus trichocarpa] gi|222855578|gb|EEE93125.1| predicted protein [Populus trichocarpa]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 78/117 (66%), Positives = 91/117 (77%)

Query: 26  SFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISAS 85
           S+ DVGT A Y  P+LPT CYGN  +QFPSSN+FAAAG+GIWDNGA+CGRQYLVRCISA+
Sbjct: 23  SYGDVGTCAAYSAPYLPTACYGNSSSQFPSSNMFAAAGEGIWDNGAACGRQYLVRCISAA 82

Query: 86  EPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQ 142
            P TC P+Q +Q+RIVD A    S PS  G TIVL+  AF TIA+ +A LINVEFQQ
Sbjct: 83  VPRTCLPDQMVQVRIVDRAQTSRSRPSSDGATIVLATPAFGTIADPSAPLINVEFQQ 139

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
TAIR|locus:2053983	130	PNP-A "plant natriuretic pepti	0.888	0.976	0.312	1.2e-12
TAIR|locus:2118656	123	AT4G30380 "AT4G30380" [Arabido	0.797	0.926	0.325	4.1e-10

TAIR|locus:2053983 PNP-A "plant natriuretic peptide A" [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 44/141 (31%), Positives = 74/141 (52%)

Query:     5 IRQALQWLSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGD 64
             I+ A++++  ++  +Q++   + A  G A  Y PP+  + CYG   TQ     L     +
Sbjct:     2 IKMAVKFVVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYG---TQ--RETLVVGVKN 56

Query:    65 GIWDNGASCGRQYLVRCISASE--PGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSE 122
              +W NG +CGR+Y VRCI A+      C   +T+ +++VD+  +    P  +G  + LS 
Sbjct:    57 NLWQNGRACGRRYRVRCIGATYNFDRACTG-RTVDVKVVDFCRE----PC-NGD-LNLSR 109

Query:   123 TAFRTIANSTATLINVEFQQV 143
              AFR IAN+ A  I V +  +
Sbjct:   110 DAFRVIANTDAGNIRVVYTPI 130

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0005618 "cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0010230 "alternative respiration" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2118656 AT4G30380 "AT4G30380" [Arabidopsis thaliana (taxid:3702)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 43/132 (32%), Positives = 67/132 (50%)

Query:    13 SFLLFISQLIC--NTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNG 70
             S + F + L+   + S+A  G A  Y   + P  CY    TQ     + AAA D +WDNG
Sbjct:     4 SIVFFSTVLVFLFSFSYATPGIATFY-TSYTP--CYRG--TQ--EGVMIAAASDTLWDNG 56

Query:    71 ASCGRQYLVRCISASE--PGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTI 128
               CG+ + V+C       P  C  + +++++IVD+       PS   +T+ LS  AF  I
Sbjct:    57 RVCGKMFTVKCSGPRNAVPHPCTGK-SVKVKIVDHC------PSGCASTLDLSREAFAQI 109

Query:   129 ANSTATLINVEF 140
             AN  A +IN+++
Sbjct:   110 ANPVAGIINIDY 121


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      143       143   0.00091  102 3  11 22  0.42    31
                                                     30  0.48    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  574 (61 KB)
  Total size of DFA:  142 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.28u 0.19s 13.47t   Elapsed:  00:00:01
  Total cpu time:  13.28u 0.19s 13.47t   Elapsed:  00:00:01
  Start:  Sat May 11 01:03:44 2013   End:  Sat May 11 01:03:45 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0071456 "cellular response to hypoxia" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZV52	EGC2_ARATH	No assigned EC number	0.3043	0.8671	0.9538	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_XVIII000365 hypothetical protein (157 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	143
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	2e-13
PLN03024	125	PLN03024, PLN03024, Putative EG45-like domain cont	3e-13

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 7/82 (8%)

Query: 60  AAAGDGIWDNGASCGRQYLVRCISASEP-GTCEPEQTIQIRIVDYALQLESTPSVSGTTI 118
           AA    ++++G +CG  Y V+C++A+ P GTC   +++ + I D        P       
Sbjct: 2   AAGSASLYNDGTACGECYQVKCLTAAHPTGTCRVLRSVTVTITDRC------PFPPRRHF 55

Query: 119 VLSETAFRTIANSTATLINVEF 140
            LS  AF  +A   A ++ VE+
Sbjct: 56  DLSGPAFEALAKPRAGIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

>gnl|CDD|178595 PLN03024, PLN03024, Putative EG45-like domain containing protein 1; Provisional

 Score = 62.0 bits (150), Expect = 3e-13
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 16/134 (11%)

Query: 13  SFLLFISQLIC--NTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNG 70
             L+F + L+   + S+A  G A  Y   + P+ CY    T F    + AAA D +W+NG
Sbjct: 4   RILIFSTVLVFLFSVSYATPGIATFY-TSYTPSACYRG--TSF--GVMIAAASDSLWNNG 58

Query: 71  ASCGRQYLVRCISASE--PGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTI 128
             CG+ + V+C       P  C   +++ ++IVD+       PS   +T+ LS  AF  I
Sbjct: 59  RVCGKMFTVKCKGPRNAVPHPCT-GKSVTVKIVDHC------PSGCASTLDLSREAFAQI 111

Query: 129 ANSTATLINVEFQQ 142
           AN  A +IN+++  
Sbjct: 112 ANPVAGIINIDYIP 125

Length = 125

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	143
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	100.0
PLN00193	256	expansin-A; Provisional	99.97
PLN00050	247	expansin A; Provisional	99.97
PLN03023	247	Expansin-like B1; Provisional	99.97
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.93
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.87
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	99.41
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	99.24
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	99.23
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	99.16
PRK10672	361	rare lipoprotein A; Provisional	99.0
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	98.72
PF02015	201	Glyco_hydro_45: Glycosyl hydrolase family 45; Inte	96.02

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=100.00  E-value=3.3e-35  Score=215.50  Aligned_cols=119  Identities=29%  Similarity=0.613  Sum_probs=101.8

Q ss_pred             HHHHHHHHHHhhhccCCceeeEEEeCCCCCCCCcccCCCCCCCCCCeEEEeCCCCCCCCcccCCeEEEEeccCC--CCCc
Q 032308           12 LSFLLFISQLICNTSFADVGTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISAS--EPGT   89 (143)
Q Consensus        12 ~~~~~~~~~~~~~~a~~~~G~aT~Y~~~~~~GaC~g~~~~~~p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~--~~~~   89 (143)
                      +||++.+++.+.+++.++.|+||||++ +.+|+||++.    +.+.++||+|+.+|++|+.||+||||+|.+..  .+.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~G~AT~Y~~-~~~gAC~~~~----~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~~~~~~~~   79 (125)
T PLN03024          5 ILIFSTVLVFLFSVSYATPGIATFYTS-YTPSACYRGT----SFGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAVPHP   79 (125)
T ss_pred             eHHHHHHHHHHhhhhcccceEEEEeCC-CCCccccCCC----CCCCEeEEeCHHHcCCCcccCceEEEEECCCCcccccc
Confidence            456666777888999999999999996 5779997663    36899999999999999999999999997532  1347


Q ss_pred             cCCCCeEEEEEeecCCCCCCCCCCCCceEEeCHHHHHHhhcCCCceEEEEEEE
Q 032308           90 CEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQ  142 (143)
Q Consensus        90 C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~~~~G~i~V~w~~  142 (143)
                      |. +++|+|+|+|+||++      +++|||||++||++||+++.|+|+|+|++
T Consensus        80 c~-gksV~V~VtD~CP~~------C~~~~DLS~~AF~~iA~~~aG~v~V~y~~  125 (125)
T PLN03024         80 CT-GKSVTVKIVDHCPSG------CASTLDLSREAFAQIANPVAGIINIDYIP  125 (125)
T ss_pred             cc-CCeEEEEEEcCCCCC------CCCceEcCHHHHHHhcCccCCEEEEEEeC
Confidence            86 789999999999952      23699999999999999999999999985

>PLN00193 expansin-A; Provisional

Probab=99.97  E-value=2.3e-31  Score=215.11  Aligned_cols=119  Identities=22%  Similarity=0.330  Sum_probs=99.1

Q ss_pred             hccCCceeeEEEeCCCC----CCCCc-ccCCCCCCCCCCeEEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEE
Q 032308           24 NTSFADVGTAARYGPPF----LPTTC-YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQI   98 (143)
Q Consensus        24 ~~a~~~~G~aT~Y~~~~----~~GaC-~g~~~~~~p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V   98 (143)
                      +.+.+..|+||||+.++    ..||| ||+.. ..+++.++||+|+.+|++|+.||+||||+|....++.+|.++++|+|
T Consensus        26 ~~~~W~~a~AT~Yg~~d~~gt~gGACGYg~l~-~~~~g~~~AAls~~lf~~G~~CGaCyev~C~~~~~~~~C~~g~sV~V  104 (256)
T PLN00193         26 TPSGWTKAHATFYGGSDASGTMGGACGYGNLY-STGYGTRTAALSTALFNDGASCGQCYRIMCDYQADSRWCIKGASVTI  104 (256)
T ss_pred             CCCCceeeEEEEcCCCCCCCCCCcccCCCCcc-ccCCCceeeecCHhHccCCccccCeEEEECCCCCCCccccCCCeEEE
Confidence            33467899999999643    36899 99854 45678899999999999999999999999964345778986779999


Q ss_pred             EEeecCCCCCCCC-------CCCCceEEeCHHHHHHhhcCCCceEEEEEEEC
Q 032308           99 RIVDYALQLESTP-------SVSGTTIVLSETAFRTIANSTATLINVEFQQV  143 (143)
Q Consensus        99 ~V~D~Cp~c~~~~-------~~~~~~lDLS~~AF~~ia~~~~G~i~V~w~~V  143 (143)
                      +|||+||..+..|       +.+..|||||++||.+||....|+|+|+||||
T Consensus       105 t~td~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA~~~~Giv~V~yrRV  156 (256)
T PLN00193        105 TATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGIYRGGIVPVLFQRV  156 (256)
T ss_pred             EEecCCCCcccccccCCCcCCCCCcccccCHHHHHHHhhhcCCeEeEEEEEe
Confidence            9999999753222       12458999999999999999999999999997

>PLN00050 expansin A; Provisional

Probab=99.97  E-value=1e-30  Score=210.59  Aligned_cols=114  Identities=25%  Similarity=0.405  Sum_probs=95.7

Q ss_pred             cCCceeeEEEeCCCC----CCCCc-ccCCCCCCCCCCeEEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEE
Q 032308           26 SFADVGTAARYGPPF----LPTTC-YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRI  100 (143)
Q Consensus        26 a~~~~G~aT~Y~~~~----~~GaC-~g~~~~~~p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V  100 (143)
                      ..|..++||||+.++    ..||| ||+... .+.+.++||+|+.+|++|..||+||||+|.+  .+.+|.+ ++|+|+|
T Consensus        23 ~~W~~a~AT~Yg~~dg~gt~gGACGYg~l~~-~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~--~~~~C~~-gsV~V~i   98 (247)
T PLN00050         23 SGWTGAHATFYGGGDASGTMGGACGYGNLYS-QGYGTNTAALSTALFNNGLSCGACFEIKCVN--DNIWCLP-GSIIITA   98 (247)
T ss_pred             CCccccEEEEcCCCCCCCCCCcccCCCCccc-cCCCceeeeccHhHccCCccccceEEEEcCC--CCcccCC-CcEEEEE
Confidence            468899999999653    36899 998543 4678899999999999999999999999976  4557984 5899999


Q ss_pred             eecCCCCCCCC-------CCCCceEEeCHHHHHHhhcCCCceEEEEEEEC
Q 032308          101 VDYALQLESTP-------SVSGTTIVLSETAFRTIANSTATLINVEFQQV  143 (143)
Q Consensus       101 ~D~Cp~c~~~~-------~~~~~~lDLS~~AF~~ia~~~~G~i~V~w~~V  143 (143)
                      ||+||+.+..|       ..+..|||||++||.+||....|+|+|+||||
T Consensus        99 td~CP~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA~~~aGii~V~yRRV  148 (247)
T PLN00050         99 TNFCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQYKAGIVPVQYRRV  148 (247)
T ss_pred             ecCCCCCcCcCccCCCcCCCCCcccccCHHHHHHHhhhcCCeeeeEEEEe
Confidence            99999743222       12458999999999999999999999999997

>PLN03023 Expansin-like B1; Provisional

Probab=99.97  E-value=3e-30  Score=207.77  Aligned_cols=107  Identities=24%  Similarity=0.529  Sum_probs=91.4

Q ss_pred             hccCCceeeEEEeCCCC----CCCCc-ccCCCCCCCCCCeEEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEE
Q 032308           24 NTSFADVGTAARYGPPF----LPTTC-YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQI   98 (143)
Q Consensus        24 ~~a~~~~G~aT~Y~~~~----~~GaC-~g~~~~~~p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V   98 (143)
                      ....+..++||||++++    ..||| ||+... ..++.++||++ .+|++|..||+||||+|.   .+.+|. +++|+|
T Consensus        21 ~~~~W~~a~AT~Yg~~~g~gt~gGACGYg~~~~-~~~g~~~aa~s-~Lf~~G~~CGaCy~irC~---~~~~C~-~~~v~V   94 (247)
T PLN03023         21 KSQDFTYSRATYYGSPDCLGTPTGACGFGEYGR-TVNGGNVAGVS-RLYRNGTGCGACYQVRCK---APNLCS-DDGVNV   94 (247)
T ss_pred             hcCCcccceEEEeCCCCCCCCCCccccCCcccc-CCCcceeeeeh-hhhcCCchhcccEEeecC---CCCccC-CCCeEE
Confidence            44457799999999875    46899 998543 33467899998 999999999999999997   477998 468999


Q ss_pred             EEeecCCCCCCCCCCCCceEEeCHHHHHHhhcC-------CCceEEEEEEEC
Q 032308           99 RIVDYALQLESTPSVSGTTIVLSETAFRTIANS-------TATLINVEFQQV  143 (143)
Q Consensus        99 ~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~~-------~~G~i~V~w~~V  143 (143)
                      +|||.||.       +..|||||.+||.+||.+       ..|+|+|+||||
T Consensus        95 ~iTd~~~~-------~~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~YrRV  139 (247)
T PLN03023         95 VVTDYGEG-------DKTDFILSPRAYARLARPNMAAELFAYGVVDVEYRRI  139 (247)
T ss_pred             EEEeCCCC-------CCCccccCHHHHHHHhCccccchhccCcEEEeEEEEE
Confidence            99999985       478999999999999995       469999999997

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.93  E-value=1.8e-26  Score=159.71  Aligned_cols=80  Identities=28%  Similarity=0.531  Sum_probs=69.4

Q ss_pred             EEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCC-------CCCceEEeCHHHHHHhhcC
Q 032308           59 FAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPS-------VSGTTIVLSETAFRTIANS  131 (143)
Q Consensus        59 iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~-------~~~~~lDLS~~AF~~ia~~  131 (143)
                      +||+|+.+|++|..||+||||+|.+  +|.+|.++++|+|+|||+||.+++.+.       .+..|||||++||.+||+.
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~--~~~~C~~~~~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA~~   78 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVD--SPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIAQY   78 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCC--CCCcccCCCeEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHhhh
Confidence            4799999999999999999999975  567898777999999999998643221       1358999999999999999


Q ss_pred             CCceEEEEE
Q 032308          132 TATLINVEF  140 (143)
Q Consensus       132 ~~G~i~V~w  140 (143)
                      +.|+|+|+|
T Consensus        79 ~~Gvi~v~y   87 (87)
T smart00837       79 KAGIVPVKY   87 (87)
T ss_pred             cCCEEeeEC
Confidence            999999997

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.87  E-value=1.1e-22  Score=137.09  Aligned_cols=76  Identities=33%  Similarity=0.629  Sum_probs=61.2

Q ss_pred             EEEeCCCCCCCCcccCCeEEEEeccCCCC-CccCCC-CeEEEEEeecCCCCCCCCCCCCceEEeCHHHHHHhhcCCCceE
Q 032308           59 FAAAGDGIWDNGASCGRQYLVRCISASEP-GTCEPE-QTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLI  136 (143)
Q Consensus        59 iaA~s~~~~~~g~~CG~c~~V~c~~~~~~-~~C~~g-~sV~V~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~~~~G~i  136 (143)
                      .||++..+|++|..||+||+++|.....+ +.|+.+ ++|+|+|+|+||+|      +.+|||||+.||++|++++.|+|
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~~~~~~~ksV~v~V~D~Cp~~------~~~~lDLS~~aF~~la~~~~G~i   74 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTCLTAASATGTCKVGNKSVTVTVVDRCPGC------PPNHLDLSPAAFKALADPDAGVI   74 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE---SSTT--BESEECEEEEEEEEE-TTS------SSSEEEEEHHHHHHTBSTTCSSE
T ss_pred             CeEEEhhhcCCCCcCCCeeeccccccCCccceEEecCCeEEEEEEccCCCC------cCCEEEeCHHHHHHhCCCCceEE
Confidence            48999999999999999999999433211 127632 99999999999997      68999999999999999999999


Q ss_pred             EEEE
Q 032308          137 NVEF  140 (143)
Q Consensus       137 ~V~w  140 (143)
                      +|+|
T Consensus        75 ~V~w   78 (78)
T PF03330_consen   75 PVEW   78 (78)
T ss_dssp             EEEE
T ss_pred             EEEC
Confidence            9999

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=99.41  E-value=8.4e-13  Score=101.89  Aligned_cols=95  Identities=22%  Similarity=0.237  Sum_probs=79.6

Q ss_pred             ceeeEEEeCCCCCCCCc-ccCCCCCCCCCCeEEEeCCCCCCCC----cccCCeEEEEeccCCCCCccCCCCeEEEEEeec
Q 032308           29 DVGTAARYGPPFLPTTC-YGNDPTQFPSSNLFAAAGDGIWDNG----ASCGRQYLVRCISASEPGTCEPEQTIQIRIVDY  103 (143)
Q Consensus        29 ~~G~aT~Y~~~~~~GaC-~g~~~~~~p~~~~iaA~s~~~~~~g----~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~  103 (143)
                      +.|-|||-+..|.+|+= -.    +.|.+.-|.|+|+.+-|-|    +.-|+.+||.     +|     .++.+|.|+|+
T Consensus        31 f~G~ATyTgsGYsGGAflLD----PI~sd~eITAlNPaqlNlGGipAAmAGaYLrVq-----GP-----KG~TTVYVTDl   96 (232)
T COG4305          31 FEGYATYTGSGYSGGAFLLD----PIPSDMEITALNPAQLNLGGIPAAMAGAYLRVQ-----GP-----KGKTTVYVTDL   96 (232)
T ss_pred             cceeEEEecccccCceEEec----CcCCcceeeecCHHHcccCCchhhhccceEEEE-----CC-----CCceEEEEecc
Confidence            36889987767777766 33    3456678999999988876    6789999998     55     46789999999


Q ss_pred             CCCCCCCCCCCCceEEeCHHHHHHhhcCCCceEEEEEEEC
Q 032308          104 ALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV  143 (143)
Q Consensus       104 Cp~c~~~~~~~~~~lDLS~~AF~~ia~~~~G~i~V~w~~V  143 (143)
                      -|+.      ..+.|||||.||.+|++...|+|+|+||.|
T Consensus        97 YPeg------asGaLDLSpNAFakIGnm~qGrIpvqWrvv  130 (232)
T COG4305          97 YPEG------ASGALDLSPNAFAKIGNMKQGRIPVQWRVV  130 (232)
T ss_pred             cccc------cccccccChHHHhhhcchhcCccceeEEEe
Confidence            9995      678999999999999999999999999976

>TIGR00413 rlpA rare lipoprotein A

Probab=99.24  E-value=8.8e-11  Score=92.56  Aligned_cols=90  Identities=23%  Similarity=0.243  Sum_probs=72.8

Q ss_pred             eeEEEeCCCCCCCCc-ccCCCCCCCCCCeEEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCC
Q 032308           31 GTAARYGPPFLPTTC-YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLES  109 (143)
Q Consensus        31 G~aT~Y~~~~~~GaC-~g~~~~~~p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~  109 (143)
                      |.|+||++..++..- .|..   |....+.||..+-.+      |..++|+...        ||++|+|+|.|++|.-  
T Consensus         1 G~ASwYg~~f~G~~TAnGe~---y~~~~~tAAHktLPl------gT~V~VtNl~--------ngrsviVrVnDRGPf~--   61 (208)
T TIGR00413         1 GLASWYGPKFHGRKTANGEV---YNMKALTAAHKTLPF------NTYVKVTNLH--------NNRSVIVRINDRGPFS--   61 (208)
T ss_pred             CEEeEeCCCCCCCcCCCCee---cCCCccccccccCCC------CCEEEEEECC--------CCCEEEEEEeCCCCCC--
Confidence            789999986654333 3543   334578888887766      8999999763        6899999999999984  


Q ss_pred             CCCCCCceEEeCHHHHHHhhcCCCceEEEEEEEC
Q 032308          110 TPSVSGTTIVLSETAFRTIANSTATLINVEFQQV  143 (143)
Q Consensus       110 ~~~~~~~~lDLS~~AF~~ia~~~~G~i~V~w~~V  143 (143)
                          ++..||||+.|+++|+-...|+.+|+.+.+
T Consensus        62 ----~gRiIDLS~aAA~~Lg~~~~G~a~V~vevl   91 (208)
T TIGR00413        62 ----DDRIIDLSHAAAREIGLISRGVGQVRIEVL   91 (208)
T ss_pred             ----CCCEEECCHHHHHHcCCCcCceEEEEEEEE
Confidence                678999999999999999999999988753

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=99.23  E-value=9.3e-11  Score=93.80  Aligned_cols=96  Identities=24%  Similarity=0.275  Sum_probs=77.2

Q ss_pred             ccCCceeeEEEeCCCCCCCCc-ccCCCCCCCCCCeEEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeec
Q 032308           25 TSFADVGTAARYGPPFLPTTC-YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDY  103 (143)
Q Consensus        25 ~a~~~~G~aT~Y~~~~~~GaC-~g~~~~~~p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~  103 (143)
                      ......|.|+||+...++--- .|+.   +....+.||..+-.|      |...+|++.+        ||++|+|+|.|+
T Consensus        79 ~~~~~~G~ASwYg~~fhgr~TA~Ge~---~n~~~~tAAH~TLP~------~t~v~VtNl~--------NgrsvvVRINDR  141 (233)
T COG0797          79 ASFEQVGYASWYGEKFHGRKTANGER---YDMNALTAAHKTLPL------PTYVRVTNLD--------NGRSVVVRINDR  141 (233)
T ss_pred             ccccccceeeeeccccCCccccCccc---ccccccccccccCCC------CCEEEEEEcc--------CCcEEEEEEeCC
Confidence            344467999999976554333 4443   334678899988888      7899999874        689999999999


Q ss_pred             CCCCCCCCCCCCceEEeCHHHHHHhhcCCCceEEEEEEEC
Q 032308          104 ALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV  143 (143)
Q Consensus       104 Cp~c~~~~~~~~~~lDLS~~AF~~ia~~~~G~i~V~w~~V  143 (143)
                      +|.-      ++..||||..|+++|+....|+.+|+.+.+
T Consensus       142 GPf~------~gRiIDlS~aAA~~l~~~~~G~a~V~i~~l  175 (233)
T COG0797         142 GPFV------SGRIIDLSKAAADKLGMIRSGVAKVRIEVL  175 (233)
T ss_pred             CCCC------CCcEeEcCHHHHHHhCCccCceEEEEEEEe
Confidence            9984      678999999999999999999988887754

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=99.16  E-value=4.7e-11  Score=86.04  Aligned_cols=59  Identities=24%  Similarity=0.331  Sum_probs=43.4

Q ss_pred             CCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeCHHHHHHhhcCC----CceEEEEEEEC
Q 032308           68 DNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANST----ATLINVEFQQV  143 (143)
Q Consensus        68 ~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~~~----~G~i~V~w~~V  143 (143)
                      .+.+.||+|++||...        +|++++|+|||+|+.+         .|||.+.+|.+|-...    .|.+.|+|+.|
T Consensus        55 ~gq~~CGkClrVTNt~--------tga~~~~RIVDqCsnG---------GLDld~~vF~~iDtdG~G~~~Ghl~V~y~fV  117 (119)
T PF00967_consen   55 MGQDSCGKCLRVTNTA--------TGAQVTVRIVDQCSNG---------GLDLDPTVFNQIDTDGQGYAQGHLIVDYEFV  117 (119)
T ss_dssp             -SGGGTT-EEEEE-TT--------T--EEEEEEEEE-SSS---------SEES-SSSHHHH-SSSHHHHHTEEEEEEEEE
T ss_pred             cCcccccceEEEEecC--------CCcEEEEEEEEcCCCC---------CcccChhHHhhhccCCcccccceEEEEEEEE
Confidence            4558999999999653        4789999999999863         7999999999996543    68999999986

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>PRK10672 rare lipoprotein A; Provisional

Probab=99.00  E-value=5.3e-09  Score=88.46  Aligned_cols=90  Identities=23%  Similarity=0.160  Sum_probs=72.3

Q ss_pred             eeeEEEeCCCCCCCCc-ccCCCCCCCCCCeEEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCC
Q 032308           30 VGTAARYGPPFLPTTC-YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLE  108 (143)
Q Consensus        30 ~G~aT~Y~~~~~~GaC-~g~~~~~~p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~  108 (143)
                      .|.|+||+..+++..- .|+.   |....+.||..+-.+      |..++|++..        ||++|+|+|.|++|.- 
T Consensus        80 ~G~ASwYg~~f~G~~TA~Ge~---~~~~~~tAAH~tLPl------ps~vrVtNl~--------ngrsvvVrVnDRGP~~-  141 (361)
T PRK10672         80 AGLAAIYDAEAGSNLTASGER---FDPNALTAAHPTLPI------PSYVRVTNLA--------NGRMIVVRINDRGPYG-  141 (361)
T ss_pred             EEEEEEeCCccCCCcCcCcee---ecCCcCeeeccCCCC------CCEEEEEECC--------CCcEEEEEEeCCCCCC-
Confidence            5889999976554444 4543   334578888888777      8999999774        6899999999999984 


Q ss_pred             CCCCCCCceEEeCHHHHHHhhcCCCceEEEEEEE
Q 032308          109 STPSVSGTTIVLSETAFRTIANSTATLINVEFQQ  142 (143)
Q Consensus       109 ~~~~~~~~~lDLS~~AF~~ia~~~~G~i~V~w~~  142 (143)
                           .+.-||||+.|+++|+-...+.+.|+.-.
T Consensus       142 -----~gRiiDLS~aAA~~Lg~~~~~~V~ve~i~  170 (361)
T PRK10672        142 -----PGRVIDLSRAAADRLNTSNNTKVRIDPII  170 (361)
T ss_pred             -----CCCeeEcCHHHHHHhCCCCCceEEEEEEe
Confidence                 67899999999999998888888887653

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=98.72  E-value=1.1e-07  Score=69.44  Aligned_cols=71  Identities=20%  Similarity=0.330  Sum_probs=51.1

Q ss_pred             CCCCCCeEEEeCCC-CCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeCHHHHHHhhc
Q 032308           52 QFPSSNLFAAAGDG-IWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIAN  130 (143)
Q Consensus        52 ~~p~~~~iaA~s~~-~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~  130 (143)
                      +.|.--+|.+.+.- -| |...||.|+||+.          ++++|.|..+|.=++          .|+||++||+.|.+
T Consensus        38 ~lp~Fp~IGg~~~V~gW-nS~~CGtC~~lty----------~g~si~vlaID~a~~----------gfnis~~A~n~LT~   96 (119)
T PF07249_consen   38 SLPNFPYIGGAPAVAGW-NSPNCGTCWKLTY----------NGRSIYVLAIDHAGG----------GFNISLDAMNDLTN   96 (119)
T ss_dssp             CSTTTTSEEEETT--ST-T-TTTT-EEEEEE----------TTEEEEEEEEEE-SS----------SEEE-HHHHHHHHT
T ss_pred             hcCCCCeeccccccccC-CCCCCCCeEEEEE----------CCeEEEEEEEecCCC----------cccchHHHHHHhcC
Confidence            34444567777764 46 4588999999995          378999999998543          49999999999987


Q ss_pred             C---CCceEEEEEEEC
Q 032308          131 S---TATLINVEFQQV  143 (143)
Q Consensus       131 ~---~~G~i~V~w~~V  143 (143)
                      .   ..|+|+++|++|
T Consensus        97 g~a~~lG~V~a~~~qV  112 (119)
T PF07249_consen   97 GQAVELGRVDATYTQV  112 (119)
T ss_dssp             S-CCCC-EEE-EEEEE
T ss_pred             CcccceeEEEEEEEEc
Confidence            3   479999999987

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>PF02015 Glyco_hydro_45: Glycosyl hydrolase family 45; InterPro: IPR000334 O-Glycosyl hydrolases 3

Probab=96.02  E-value=0.013  Score=46.26  Aligned_cols=54  Identities=17%  Similarity=0.153  Sum_probs=33.6

Q ss_pred             EEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeCHH
Q 032308           59 FAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSET  123 (143)
Q Consensus        59 iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS~~  123 (143)
                      +||.+-.-......|++||+++-+++.     -.||+.+|+|++.--+-      ..+||||.-+
T Consensus        70 faA~~~~G~~e~~~Cc~Cy~LtFt~g~-----l~GKkmiVQ~tNtG~dl------g~n~FDl~iP  123 (201)
T PF02015_consen   70 FAAASITGGSESSWCCACYELTFTSGP-----LKGKKMIVQVTNTGGDL------GSNQFDLAIP  123 (201)
T ss_dssp             EEEEE-TT--HHHHTT-EEEEEE-SST-----TTT-EEEEEEEEE-TTT------TTTEEEEE-T
T ss_pred             eeeeeecCCCCCCcccceEEEEEcCCC-----cCCCEeEEEecccCCCC------CCCeEEEEeC
Confidence            566653322334789999999987632     23899999999988663      4689999754

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 45 GH45 from CAZY comprises enzymes with only one known activity; endoglucanase (3.2.1.4 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases, cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produce a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family K or as the glycosyl hydrolases family 45 []. The best conserved regions in these enzymes is located in the N-terminal section. It contains an aspartic acid residue which has been shown [] to act as a nucleophile in the catalytic mechanism. This also has several cysteines that are involved in forming disulphide bridges.; GO: 0008810 cellulase activity, 0005975 carbohydrate metabolic process; PDB: 1OA7_A 1OA9_A 1L8F_A 1HD5_A 4ENG_A 3ENG_A 2ENG_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	143
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	3e-07
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	2e-06
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	3e-06

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score = 46.8 bits (111), Expect = 3e-07
 Identities = 23/117 (19%), Positives = 35/117 (29%), Gaps = 23/117 (19%)

Query: 31  GTAARYGPPFLPTTCYGNDPTQFPSSNLFAAAGDGIWDNG----ASCGRQYLVRCISASE 86
           G A   G  +       +     PS     A      + G    A  G    V       
Sbjct: 9   GYATYTGSGYSGGAFLLDPI---PSDMEITAINPADLNYGGVKAALAGSYLEVEG----- 60

Query: 87  PGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV 143
                P+    + + D        P  +   + LS  AFR I N     IN++++ V
Sbjct: 61  -----PKGKTTVYVTD------LYPEGARGALDLSPNAFRKIGNMKDGKINIKWRVV 106

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score = 44.4 bits (104), Expect = 2e-06
 Identities = 25/111 (22%), Positives = 36/111 (32%), Gaps = 17/111 (15%)

Query: 31  GTAARYGPPFLPTTC-------YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCIS 83
             A  YG P               N     P S + A     I+ +G  CG  Y VRC  
Sbjct: 22  ARATWYGQPNGAGAPDNGGACGIKNVNLP-PYSGMTACGNVPIFKDGKGCGSCYEVRC-- 78

Query: 84  ASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANSTAT 134
             +P       T+ I  ++Y         ++     LS  AF ++A     
Sbjct: 79  KEKPECSGNPVTVYITDMNY-------EPIAPYHFDLSGKAFGSLAKPGLN 122

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score = 44.0 bits (103), Expect = 3e-06
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 24/127 (18%)

Query: 31  GTAARYGPPFLPTTC-------YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCIS 83
             +  YG P             Y +     P S +       I+ +G  CG  + ++C  
Sbjct: 22  AKSTWYGKPTGAGPKDNGGACGYKDVDKP-PFSGMTGCGNTPIFKSGRGCGSCFEIKC-- 78

Query: 84  ASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANS-------TATLI 136
            ++P  C  E  + + I D     ++   ++     LS  AF  +A         +A  +
Sbjct: 79  -TKPEACSGEPVV-VHITD-----DNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGEL 131

Query: 137 NVEFQQV 143
            ++F++V
Sbjct: 132 ELQFRRV 138

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	143
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	99.97
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	99.97
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	99.96
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.94
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.75
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.73
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	98.69
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	98.54
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	98.49
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	98.49
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	98.47
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	98.35
2eng_A	210	Endoglucanase V; cellulose degradation, hydrolase	96.58

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=99.97  E-value=3.2e-31  Score=212.38  Aligned_cols=108  Identities=27%  Similarity=0.439  Sum_probs=94.3

Q ss_pred             cCCceeeEEEeCCCC------CCCCc-ccCCCCCCCCCCeEEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEE
Q 032308           26 SFADVGTAARYGPPF------LPTTC-YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQI   98 (143)
Q Consensus        26 a~~~~G~aT~Y~~~~------~~GaC-~g~~~~~~p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V   98 (143)
                      ..+..|+||||++++      ..||| |++. .+.|.+.++||+|+.+|++|..||+||||+|.+   +..|. +++|+|
T Consensus        17 ~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~-~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~---~~~C~-~~sv~V   91 (245)
T 2hcz_X           17 GKWLTARATWYGQPNGAGAPDNGGACGIKNV-NLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKE---KPECS-GNPVTV   91 (245)
T ss_dssp             CCCEEEEEEECSCTTSCSSTTSCCTTCCCCT-TSTTTTTCEEEECHHHHGGGTSTTCEEEEECCS---SSSBC-SSCEEE
T ss_pred             CceeeeEEEEeCCCCCCCcCCCCccCCCCCC-CcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCC---CCccC-CCCEEE
Confidence            356799999999865      37999 9984 356788999999999999999999999999985   45797 689999


Q ss_pred             EEeecCCCCCCCCCCCCceEEeCHHHHHHhhc-------CCCceEEEEEEEC
Q 032308           99 RIVDYALQLESTPSVSGTTIVLSETAFRTIAN-------STATLINVEFQQV  143 (143)
Q Consensus        99 ~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~-------~~~G~i~V~w~~V  143 (143)
                      +|||+||++     .+..|||||+.||++||+       .+.|+|+|+||+|
T Consensus        92 ~VtD~C~C~-----~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV  138 (245)
T 2hcz_X           92 YITDMNYEP-----IAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRV  138 (245)
T ss_dssp             EEEEECCCT-----TSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEE
T ss_pred             EEEeccCCC-----CCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEE
Confidence            999999853     267999999999999999       6899999999997

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=99.97  E-value=4.4e-31  Score=211.14  Aligned_cols=108  Identities=22%  Similarity=0.437  Sum_probs=91.4

Q ss_pred             cCCceeeEEEeCCCC------CCCCc-ccCCCCCCCCCCeEEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEE
Q 032308           26 SFADVGTAARYGPPF------LPTTC-YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQI   98 (143)
Q Consensus        26 a~~~~G~aT~Y~~~~------~~GaC-~g~~~~~~p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V   98 (143)
                      ..+..|+||||++++      .+||| |++. .+.|.+.++||+|+.+|++|..||+||||+|.+   ++.|. +++|+|
T Consensus        17 ~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~-~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~---~~~C~-~~~v~V   91 (241)
T 1n10_A           17 DKWLDAKSTWYGKPTGAGPKDNGGACGYKDV-DKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK---PEACS-GEPVVV   91 (241)
T ss_dssp             CSCEEEEEEEEC----------CCTTCCCCT-TSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS---STTBC-SCCEEE
T ss_pred             CCceeeEEEEeCCCCCCCcCCCCeeCCCCCc-CcCCCCcEEEEeCHHHccCcccCCCeEEEEeCC---CCccC-CCCEEE
Confidence            457799999999764      47999 9984 456778999999999999999999999999985   34798 689999


Q ss_pred             EEeecCCCCCCCCCCCCceEEeCHHHHHHhhc-------CCCceEEEEEEEC
Q 032308           99 RIVDYALQLESTPSVSGTTIVLSETAFRTIAN-------STATLINVEFQQV  143 (143)
Q Consensus        99 ~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~-------~~~G~i~V~w~~V  143 (143)
                      +|||+|++.     .+..|||||+.||++||+       .+.|+|+|+||+|
T Consensus        92 ~VtD~C~C~-----~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV  138 (241)
T 1n10_A           92 HITDDNEEP-----IAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV  138 (241)
T ss_dssp             EEEEECSSC-----SSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEEC
T ss_pred             EEeEecCCC-----CCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEE
Confidence            999999642     256899999999999999       5899999999998

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=99.96  E-value=4.2e-29  Score=195.69  Aligned_cols=98  Identities=21%  Similarity=0.208  Sum_probs=87.4

Q ss_pred             cCCceeeEEEeCCCCCCCCc-ccCCCCCCCCCCeEEEeCCCCCCCC----cccCCeEEEEeccCCCCCccCCCCeEEEEE
Q 032308           26 SFADVGTAARYGPPFLPTTC-YGNDPTQFPSSNLFAAAGDGIWDNG----ASCGRQYLVRCISASEPGTCEPEQTIQIRI  100 (143)
Q Consensus        26 a~~~~G~aT~Y~~~~~~GaC-~g~~~~~~p~~~~iaA~s~~~~~~g----~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V  100 (143)
                      ...+.|+||||++....||| +..    .|.+.++||+|+.+|++|    +.||+||||+|.          +++|+|+|
T Consensus         4 ~~~~~G~aT~Y~~g~~~GACG~~~----~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~----------~gsv~V~v   69 (208)
T 3d30_A            4 DDLHEGYATYTGSGYSGGAFLLDP----IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP----------KGKTTVYV   69 (208)
T ss_dssp             TCCEEEEEEECSTTSSSCTTCCCC----CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET----------TEEEEEEE
T ss_pred             CCcEEEEEEEcCCCCCCCcCCCCC----CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC----------CCcEEEEE
Confidence            45678999999987778999 553    356799999999999998    899999999983          45899999


Q ss_pred             eecCCCCCCCCCCCCceEEeCHHHHHHhhcCCCceEEEEEEEC
Q 032308          101 VDYALQLESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV  143 (143)
Q Consensus       101 ~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~~~~G~i~V~w~~V  143 (143)
                      +|+||.|      +..|||||++||++||+.+.|+++|+||+|
T Consensus        70 ~D~CP~C------~~~~~DLS~~aF~~la~~~~G~i~v~~~~V  106 (208)
T 3d30_A           70 TDLYPEG------ARGALDLSPNAFRKIGNMKDGKINIKWRVV  106 (208)
T ss_dssp             EEECTTC------CTTCEEECHHHHHHHSCGGGSSEEEEEEEE
T ss_pred             EECCCCC------CCCeEECCHHHHHHhcccCCCEEEEEEEEe
Confidence            9999987      578999999999999999999999999987

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.94  E-value=5.1e-28  Score=185.01  Aligned_cols=115  Identities=14%  Similarity=0.174  Sum_probs=92.1

Q ss_pred             CCceeeEEEeCCCCCCCCc-ccCCC--CCC--CCCCeEEEeCCCCCCCC------cccCCeEEEEeccCCC---CCccCC
Q 032308           27 FADVGTAARYGPPFLPTTC-YGNDP--TQF--PSSNLFAAAGDGIWDNG------ASCGRQYLVRCISASE---PGTCEP   92 (143)
Q Consensus        27 ~~~~G~aT~Y~~~~~~GaC-~g~~~--~~~--p~~~~iaA~s~~~~~~g------~~CG~c~~V~c~~~~~---~~~C~~   92 (143)
                      .+..+.||||+.. ..||| ||+..  ..+  +.+.++||+|+.+|++|      ..||+||||+|.+..-   +.+|.+
T Consensus        13 g~~~A~aT~Yg~~-~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg~~~~~   91 (181)
T 1wc2_A           13 GKSCASTTNYHDS-HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVRE   91 (181)
T ss_dssp             TEEEEEEEEECCC-BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCCT
T ss_pred             CccccceeEecCC-CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccccccCCC
Confidence            3456899999975 68999 99432  233  34789999999999997      8999999999986320   023455


Q ss_pred             CCeEEEEEeecCCC-----CCCCCC---------CCCceEEeCHHHHHHhhcCCCceEEEEEEEC
Q 032308           93 EQTIQIRIVDYALQ-----LESTPS---------VSGTTIVLSETAFRTIANSTATLINVEFQQV  143 (143)
Q Consensus        93 g~sV~V~V~D~Cp~-----c~~~~~---------~~~~~lDLS~~AF~~ia~~~~G~i~V~w~~V  143 (143)
                      +++|+|||||+||.     .||+|+         +...|||||++| .+|+....|+|+|+||||
T Consensus        92 g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV  155 (181)
T 1wc2_A           92 GLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVV  155 (181)
T ss_dssp             TCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEE
T ss_pred             CCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEE
Confidence            78999999999994     477653         346899999999 899999999999999997

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.75  E-value=1.5e-17  Score=115.66  Aligned_cols=91  Identities=21%  Similarity=0.281  Sum_probs=75.5

Q ss_pred             ceeeEEEeCCCCC--CCCcccCCCCCCCCCCeEEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCC
Q 032308           29 DVGTAARYGPPFL--PTTCYGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQ  106 (143)
Q Consensus        29 ~~G~aT~Y~~~~~--~GaC~g~~~~~~p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~  106 (143)
                      ..|.|+||++..+  .+|| |+.   +....++||..+-      .||..++|++..        ||++|+|+|.|+||.
T Consensus         2 ~~G~ASwYg~~f~G~~TA~-Ge~---~~~~~~tAAH~tl------P~gt~vrVtNl~--------nGksVvVrVnDRGP~   63 (95)
T 4avr_A            2 DTGEASYYGSRHAGLRTAS-GER---YNPNAMTAAHRTL------PFGARVRVTNLD--------NRRSVVVRINDRGPF   63 (95)
T ss_dssp             EEEEEEECCGGGTTSBCTT-SCB---CCTTSCEEECSSS------CTTCEEEEEETT--------TCCEEEEEEEECCCC
T ss_pred             CEEEEEEECCccCCCCCCC-ccC---cCCCCCEEEcCCC------CCCcEEEEEECC--------CCcEEEEEEccCCCC
Confidence            3699999998544  4566 432   3356899998865      469999999763        689999999999998


Q ss_pred             CCCCCCCCCceEEeCHHHHHHhhcCCCceEEEEEEEC
Q 032308          107 LESTPSVSGTTIVLSETAFRTIANSTATLINVEFQQV  143 (143)
Q Consensus       107 c~~~~~~~~~~lDLS~~AF~~ia~~~~G~i~V~w~~V  143 (143)
                      +      .+..||||+.||++|+..+.|+++|+|+.+
T Consensus        64 ~------~griIDLS~aAa~~Lg~~~~G~~~V~ve~~   94 (95)
T 4avr_A           64 R------RGRIIDVSRKAAEGLGMIRSGVAPVRIESL   94 (95)
T ss_dssp             S------TTEEEEECHHHHHHHTCTTTSCEEEEEEEC
T ss_pred             C------CCCEEEeCHHHHHHhCCcCCCEEEEEEEEe
Confidence            6      678999999999999999999999999975

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.73  E-value=1.2e-18  Score=126.73  Aligned_cols=59  Identities=29%  Similarity=0.373  Sum_probs=52.9

Q ss_pred             CCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeC-HHHHHHhhc----CCCceEEEEEEE
Q 032308           68 DNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLS-ETAFRTIAN----STATLINVEFQQ  142 (143)
Q Consensus        68 ~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS-~~AF~~ia~----~~~G~i~V~w~~  142 (143)
                      ++++.||+|++|++..        ++++|+|+|+|+||.|         +|||| ++||++|++    .+.|+++|+|++
T Consensus        58 ~~g~~CG~cv~Vtn~~--------nGksV~V~VvD~CP~g---------gLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~  120 (125)
T 1bw3_A           58 RGQAACGKCLRVTNPA--------TGAQITARIVDQCANG---------GLDLDWDTVFTKIDTNGIGYQQGHLNVNYQF  120 (125)
T ss_dssp             CSGGGTTCEEEEEETT--------TTEEEEEEEEECCSSS---------SCCSCSSSSHHHHCSSCHHHHHSEEEEEEEE
T ss_pred             CCCcccCCEEEeEeCC--------CCCEEEEEEEEeCCCC---------CCCCCCHHHHHHHhccCCcccCcEEEEEEEE
Confidence            7789999999999753        4799999999999974         39999 999999998    668999999998


Q ss_pred             C
Q 032308          143 V  143 (143)
Q Consensus       143 V  143 (143)
                      |
T Consensus       121 V  121 (125)
T 1bw3_A          121 V  121 (125)
T ss_dssp             E
T ss_pred             E
Confidence            6

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=98.69  E-value=7.5e-08  Score=69.92  Aligned_cols=72  Identities=29%  Similarity=0.399  Sum_probs=58.6

Q ss_pred             CCCCCCeEEEeCCCC-CCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeCHHHHHHhhc
Q 032308           52 QFPSSNLFAAAGDGI-WDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIAN  130 (143)
Q Consensus        52 ~~p~~~~iaA~s~~~-~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~  130 (143)
                      ++|.--+|.+...-- |+ ...||+|++|+..         ++++|.|..+|.=++          .|+++.+||+.|.+
T Consensus        45 ~lp~FP~IGga~~iagWN-S~~CGtC~~lty~---------ng~sI~vlaID~A~~----------gFnIs~~Amn~LT~  104 (129)
T 2kqa_A           45 EVPGFPNVGGIPDIAGWD-SPSCGTCWKVTIP---------NGNSIFIRGVDSGRG----------GFNVNPTAFTKLVG  104 (129)
T ss_dssp             SSSCSSSEEEETTCCSTT-CTTCSCEEEEEET---------TTEEEEEEEEEECSS----------SEEECHHHHHHHHS
T ss_pred             cCCCCCeeccchhhccCC-CCCCCceEEEEEc---------CCCEEEEEEEccCCC----------ceeehHHHHHHhcC
Confidence            445445677666544 66 7999999999963         479999999998764          49999999999987


Q ss_pred             -CCCceE-EEEEEEC
Q 032308          131 -STATLI-NVEFQQV  143 (143)
Q Consensus       131 -~~~G~i-~V~w~~V  143 (143)
                       ...|+| +++|++|
T Consensus       105 G~~lG~V~~a~~~qV  119 (129)
T 2kqa_A          105 STEAGRVDNVNYVQV  119 (129)
T ss_dssp             SSSSCCBCSCEEEEC
T ss_pred             CcccCcEeEEEEEEc
Confidence             568999 9999997

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=98.54  E-value=2.8e-07  Score=66.25  Aligned_cols=71  Identities=23%  Similarity=0.351  Sum_probs=56.1

Q ss_pred             CCCCCCeEEEeCC-CCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeCHHHHHHhhc
Q 032308           52 QFPSSNLFAAAGD-GIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIAN  130 (143)
Q Consensus        52 ~~p~~~~iaA~s~-~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~  130 (143)
                      +.|.--+|.+... .-|++ ..||.|+||+.          ++++|.|..+|.=++          .|+||.+||+.|.+
T Consensus        39 ~lp~FP~IGg~~~i~gwns-~~CGtC~~lty----------~g~si~vlaID~a~~----------Gfnis~~A~n~LT~   97 (120)
T 3m3g_A           39 QIPRFPYIGGAAAVAGWNS-ASCGTCWKLQY----------SGHTIYVLAVDHAAS----------GFNIALDAMNALTG   97 (120)
T ss_dssp             GSTTTTSEEEETTCCSTTC-TTTTCEEEEEE----------TTEEEEEEEEEECSS----------SEEECHHHHHHHHT
T ss_pred             cCCCCCccccccccccCCC-CCCCceEEEEE----------CCeEEEEEEEecCCC----------ceeecHHHHHHhhC
Confidence            3444456776654 44654 89999999995          479999999998764          49999999999986


Q ss_pred             CC---CceEEEEEEEC
Q 032308          131 ST---ATLINVEFQQV  143 (143)
Q Consensus       131 ~~---~G~i~V~w~~V  143 (143)
                      -.   .|+|+++|++|
T Consensus        98 G~a~~lG~V~a~~~~V  113 (120)
T 3m3g_A           98 GQAVQLGRVSATATQV  113 (120)
T ss_dssp             SCHHHHCEEECEEEEE
T ss_pred             CcceeeeeEeEEEEEc
Confidence            43   49999999986

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.49  E-value=5.6e-07  Score=65.27  Aligned_cols=75  Identities=20%  Similarity=0.373  Sum_probs=56.3

Q ss_pred             CCCCCeEEEeCC-CCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeCHHHHHHhhcC
Q 032308           53 FPSSNLFAAAGD-GIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANS  131 (143)
Q Consensus        53 ~p~~~~iaA~s~-~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~~  131 (143)
                      +|.--+|.+... .-|++ ..||.|+||+..++.+     ..++|.|..+|.=++          .|+||.+||+.|.+.
T Consensus        40 lp~FP~IGg~~~i~gwns-~~CGtC~~lty~g~~~-----~~~si~vlaID~a~~----------Gfnis~~Amn~LT~g  103 (127)
T 3suj_A           40 LPGFPCIGGSSDIAGYNS-PNCGSCYQLTYSSAHT-----TPKSIYMVAIDRSAE----------GFTASKQAMDDLTNK  103 (127)
T ss_dssp             STTTTSEEEETTCCSTTC-TTTTCEEEEEECCSSS-----CCEEEEEEEEEECSS----------SEEECHHHHHHHHTS
T ss_pred             cCCCCeeccccccccCCC-CCCCceEEEEECCCCC-----cceEEEEEEEecCCC----------ceeecHHHHHHhcCC
Confidence            343455666553 44654 8999999999753211     138999999998765          399999999999865


Q ss_pred             C---CceEEEEEEEC
Q 032308          132 T---ATLINVEFQQV  143 (143)
Q Consensus       132 ~---~G~i~V~w~~V  143 (143)
                      .   .|+|+++|++|
T Consensus       104 ~a~~lG~V~~~~~~V  118 (127)
T 3suj_A          104 RAEELGTVNVDVRKV  118 (127)
T ss_dssp             CHHHHSSEEEEEEEE
T ss_pred             ccccceeEEEEEEEe
Confidence            4   48999999987

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=98.49  E-value=5.9e-07  Score=64.74  Aligned_cols=66  Identities=24%  Similarity=0.337  Sum_probs=53.7

Q ss_pred             EEEeCC-CCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeCHHHHHHhhcCC---Cc
Q 032308           59 FAAAGD-GIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANST---AT  134 (143)
Q Consensus        59 iaA~s~-~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~~~---~G  134 (143)
                      |.+... .-|++ ..||.|+||+...        .+++|.|..+|.=++          .|||+.+||+.|.+..   .|
T Consensus        46 IGg~~~V~gwnS-~~CGtC~~lty~~--------~g~si~vlaID~a~~----------Gfnis~~Amn~LT~G~a~~lG  106 (122)
T 3sul_A           46 VGAVDTITGWNS-ESCGTCYQITWSG--------TGKTIHVVGVDVAGN----------GFNVGQRAMDDLTNGQAVALG  106 (122)
T ss_dssp             EEEETTCCSTTC-TTTTCEEEEEETT--------TTEEEEEEEEEECSS----------SEEECHHHHHHHHTSCHHHHS
T ss_pred             cccccccccCCC-CCCCceEEEEEcC--------CCcEEEEEEEecCCC----------ceeehHHHHHHhcCCcceecc
Confidence            666555 44665 9999999999641        279999999998764          3999999999998643   49


Q ss_pred             eEEEEEEEC
Q 032308          135 LINVEFQQV  143 (143)
Q Consensus       135 ~i~V~w~~V  143 (143)
                      +|+++|++|
T Consensus       107 ~V~a~~~qV  115 (122)
T 3sul_A          107 NIDVTATLV  115 (122)
T ss_dssp             EEEEEEEEE
T ss_pred             eEeEEEEEc
Confidence            999999986

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.47  E-value=6.4e-07  Score=64.82  Aligned_cols=74  Identities=23%  Similarity=0.373  Sum_probs=56.6

Q ss_pred             CCCCCeEEEeCC-CCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeCHHHHHHhhcC
Q 032308           53 FPSSNLFAAAGD-GIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANS  131 (143)
Q Consensus        53 ~p~~~~iaA~s~-~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~~  131 (143)
                      +|.--+|.+... .-||+ ..||.|+||+..+.      ..+++|.|..+|.=++          .|+|+.+||+.|.+.
T Consensus        41 lp~FP~IGg~~~i~gwnS-~~CGtC~~lty~g~------~~~~si~vlaID~a~~----------Gfnis~~Amn~LT~G  103 (125)
T 3suk_A           41 VPTFPHIGASSDIGGFNS-PACGNCYTISFTFQ------GVTRSINLVAIDHAGN----------GFNVAQAAMDELTNG  103 (125)
T ss_dssp             STTTTSEEEETTCCSTTC-TTTTCEEEEEEEET------TEEEEEEEEEEEECSS----------SEEECHHHHHHHHTS
T ss_pred             cCCCCeeccccccccCCC-CCCCeeEEEEEcCC------CcceEEEEEEEecCCC----------ceeecHHHHHHhcCC
Confidence            444456776665 44764 89999999997521      1238999999998764          399999999999874


Q ss_pred             C---CceEEEEEEEC
Q 032308          132 T---ATLINVEFQQV  143 (143)
Q Consensus       132 ~---~G~i~V~w~~V  143 (143)
                      .   .|+|+++|++|
T Consensus       104 ~a~~lG~V~~~~~~V  118 (125)
T 3suk_A          104 NAVALGTIDVQSQQV  118 (125)
T ss_dssp             CHHHHCEEEEEEEEE
T ss_pred             cccccceEeEEEEEc
Confidence            3   49999999987

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=98.35  E-value=1.3e-06  Score=63.81  Aligned_cols=68  Identities=16%  Similarity=0.152  Sum_probs=53.9

Q ss_pred             CCCCeEEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeCHHHHHHhhcCC-
Q 032308           54 PSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANST-  132 (143)
Q Consensus        54 p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~~~-  132 (143)
                      |.--+|.+..   | +...||.|++|+.          +|++|.|..+|.=.+        +..||||.+||+.|.+.. 
T Consensus        45 p~FP~igg~~---w-ns~~CGtCwkLtY----------~G~sI~vlaID~a~~--------g~~FnIs~~Amn~LT~G~~  102 (136)
T 3sum_A           45 LNFPHFVAAP---E-AQTECGSCWKLRY----------KGNHAFVTVVDRVEE--------ANLFVGGTDLVKNLTTFNG  102 (136)
T ss_dssp             TTTTSEEECC---B-TTBCTTCEEEEEE----------TTEEEEEEEEECCCS--------TTEEEECHHHHHHHTCBTT
T ss_pred             CCCCcccccc---c-CCCCCCceEEEEE----------CCeEEEEEEEecCCC--------cceEeehHHHHHHHhCCCc
Confidence            3334577766   5 4589999999995          378999999998754        235999999999998643 


Q ss_pred             ------CceEEE-EEEEC
Q 032308          133 ------ATLINV-EFQQV  143 (143)
Q Consensus       133 ------~G~i~V-~w~~V  143 (143)
                            .|+|++ +|++|
T Consensus       103 a~~a~elG~Vda~~~~qV  120 (136)
T 3sum_A          103 APEGYDWGTAQLFSAYQV  120 (136)
T ss_dssp             BCHHHHHSEEECSEEEEE
T ss_pred             cccceecceeeeeEEEEc
Confidence                  499999 99987

>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A

Probab=96.58  E-value=0.0023  Score=49.65  Aligned_cols=52  Identities=15%  Similarity=0.167  Sum_probs=34.8

Q ss_pred             EEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeC
Q 032308           59 FAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLS  121 (143)
Q Consensus        59 iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS  121 (143)
                      +||.+-.--.....|++||+++-.++.    . .||+.+|+||+...+-      ..+||||.
T Consensus        72 FaA~~~~g~~e~~~Cc~C~~LtFt~~~----~-~GKkmiVQ~TNtG~Dl------~~n~FDl~  123 (210)
T 2eng_A           72 FAATSIAGSNEAGWCCACYELTFTSGP----V-AGKKMVVQSTSTGGDL------GSNHFDLN  123 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSGG----G-TTCEEEEEEEEC-----------CCEEEEE
T ss_pred             eeeeeccCCccccccceeEEEEEcCCC----c-CCCEEEEEEecccCCC------CCCceeEe
Confidence            566663322224679999999987632    2 3899999999999763      56899985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	143
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	1e-07
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	1e-07

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score = 45.8 bits (108), Expect = 1e-07
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 22/126 (17%)

Query: 31  GTAARYGPPFLPTTCYGN------DPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISA 84
             +  YG P               D  + P S +       I+ +G  CG  + ++C   
Sbjct: 20  AKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKC--- 76

Query: 85  SEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLSETAFRTIANS-------TATLIN 137
           ++P  C   + + + I D     ++   ++     LS  AF  +A         +A  + 
Sbjct: 77  TKPEACSG-EPVVVHITD-----DNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELE 130

Query: 138 VEFQQV 143
           ++F++V
Sbjct: 131 LQFRRV 136

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score = 46.2 bits (109), Expect = 1e-07
 Identities = 15/141 (10%), Positives = 26/141 (18%), Gaps = 26/141 (18%)

Query: 29  DVGTAARYGPPFLPTTCYGNDPTQFPSSN----LFAAAGDGIWDN------GASCGRQYL 78
              +   Y          G                AAA    +D+      G  CG+   
Sbjct: 15  SCASTTNYHDSHKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIK 74

Query: 79  VRCISASE---PGTCEPEQTIQIRIVDYA------LQLESTPSVSGTTIVLS-------E 122
           +           G      +    I +            +  S  G             E
Sbjct: 75  LTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLE 134

Query: 123 TAFRTIANSTATLINVEFQQV 143
                +           ++ V
Sbjct: 135 NGRSQVTGMGWNNPETTWEVV 155

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	143
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	99.97
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	99.96
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.84
d2enga_	210	Endoglucanase V (Eng V) {Humicola insolens [TaxId:	96.4

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.97  E-value=1.5e-32  Score=202.66  Aligned_cols=108  Identities=22%  Similarity=0.436  Sum_probs=92.5

Q ss_pred             cCCceeeEEEeCCCC------CCCCc-ccCCCCCCCCCCeEEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEE
Q 032308           26 SFADVGTAARYGPPF------LPTTC-YGNDPTQFPSSNLFAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQI   98 (143)
Q Consensus        26 a~~~~G~aT~Y~~~~------~~GaC-~g~~~~~~p~~~~iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V   98 (143)
                      ..|..|+||||+.++      ..||| |++.. +.|.+.++||+|+.+|++|..||+||||+|.+   +.+|. +++|+|
T Consensus        15 ~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~-~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~---~~~c~-~~sv~V   89 (143)
T d1n10a2          15 DKWLDAKSTWYGKPTGAGPKDNGGACGYKDVD-KPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK---PEACS-GEPVVV   89 (143)
T ss_dssp             CSCEEEEEEEEC----------CCTTCCCCTT-STTTTTCEEEECHHHHGGGTTSSCEEEEEECS---STTBC-SCCEEE
T ss_pred             CCcEeeEEeEeCCCCCCCCCCCcccCCCCCcc-cCCCcceEEEeCHhHccCCCcCCcceEeEcCC---CCccc-CCCEEE
Confidence            468899999998542      36999 98854 45788999999999999999999999999984   56886 789999


Q ss_pred             EEeecCCCCCCCCCCCCceEEeCHHHHHHhhcC-------CCceEEEEEEEC
Q 032308           99 RIVDYALQLESTPSVSGTTIVLSETAFRTIANS-------TATLINVEFQQV  143 (143)
Q Consensus        99 ~V~D~Cp~c~~~~~~~~~~lDLS~~AF~~ia~~-------~~G~i~V~w~~V  143 (143)
                      +|||.||++     ++.+|||||+.||++||+.       +.|+|+|+||||
T Consensus        90 ~vtd~c~~~-----~~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRrV  136 (143)
T d1n10a2          90 HITDDNEEP-----IAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV  136 (143)
T ss_dssp             EEEEECSSC-----SSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEEC
T ss_pred             EEEecccCC-----CCCccccCCHHHHhhhccccchhhheecCccceEEEEE
Confidence            999999975     3678999999999999996       479999999998

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=99.96  E-value=2.9e-30  Score=196.31  Aligned_cols=115  Identities=12%  Similarity=0.123  Sum_probs=93.4

Q ss_pred             CCceeeEEEeCCCCCCCCc-ccCCCCCCCC----CCeEEEeCCCCCCC------CcccCCeEEEEeccCCC---CCccCC
Q 032308           27 FADVGTAARYGPPFLPTTC-YGNDPTQFPS----SNLFAAAGDGIWDN------GASCGRQYLVRCISASE---PGTCEP   92 (143)
Q Consensus        27 ~~~~G~aT~Y~~~~~~GaC-~g~~~~~~p~----~~~iaA~s~~~~~~------g~~CG~c~~V~c~~~~~---~~~C~~   92 (143)
                      .+..+++|||+.. +.||| ||+.....|.    +.++||+|+.+|++      |+.||+||||+|++...   +..|..
T Consensus        13 g~~~A~aT~Ygd~-~~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~~~~~~   91 (180)
T d1wc2a1          13 GKSCASTTNYHDS-HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVRE   91 (180)
T ss_dssp             TEEEEEEEEECCC-BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCCT
T ss_pred             CccccceEEeCCC-CCCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccCCCCCC
Confidence            4567899999964 58999 9987654443    47899999999999      89999999999986431   122334


Q ss_pred             CCeEEEEEeecCCC-----CCCCCC---------CCCceEEeCHHHHHHhhcCCCceEEEEEEEC
Q 032308           93 EQTIQIRIVDYALQ-----LESTPS---------VSGTTIVLSETAFRTIANSTATLINVEFQQV  143 (143)
Q Consensus        93 g~sV~V~V~D~Cp~-----c~~~~~---------~~~~~lDLS~~AF~~ia~~~~G~i~V~w~~V  143 (143)
                      +++|+|||||+||.     .||+++         +...||||| ++|.+||....|+|+|+||||
T Consensus        92 g~sV~V~iTd~CP~n~~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia~~~~G~v~V~yrrV  155 (180)
T d1wc2a1          92 GLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVTGMGWNNPETTWEVV  155 (180)
T ss_dssp             TCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTGGGTCSSEEEEEEEE
T ss_pred             CCcEEEEEEecCCCCCCCCCccCCccccccccccCcccceech-HHHHHHhhhcCCcceeEEEEe
Confidence            78999999999996     367654         345699998 599999999999999999997

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.84  E-value=1.5e-09  Score=75.52  Aligned_cols=60  Identities=28%  Similarity=0.367  Sum_probs=49.1

Q ss_pred             CCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeC-HHHHHHhhcCC----CceEEEEEE
Q 032308           67 WDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLS-ETAFRTIANST----ATLINVEFQ  141 (143)
Q Consensus        67 ~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS-~~AF~~ia~~~----~G~i~V~w~  141 (143)
                      ..+.+.||+|++||...        +|++++++|||+|..         +.|||. +..|.+|-..+    .|.+.|+|+
T Consensus        57 p~gq~sCGkclrvTN~a--------tga~~~~RiVDqCsn---------gGlDLD~~~vFn~iDtdG~G~~~Ghl~V~y~  119 (125)
T d1bw3a_          57 PRGQAACGKCLRVTNPA--------TGAQITARIVDQCAN---------GGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQ  119 (125)
T ss_dssp             CCSGGGTTCEEEEEETT--------TTEEEEEEEEECCSS---------SSCCSCSSSSHHHHCSSCHHHHHSEEEEEEE
T ss_pred             CcCcccccceEEeeecc--------cCcEEEEEEeecccC---------CCCccccHhhhheecCCCcccccccEEEEEE
Confidence            34558899999999763        478999999999964         469999 78999996544    588999998


Q ss_pred             EC
Q 032308          142 QV  143 (143)
Q Consensus       142 ~V  143 (143)
                      .|
T Consensus       120 fV  121 (125)
T d1bw3a_         120 FV  121 (125)
T ss_dssp             EE
T ss_pred             Ee
Confidence            86

>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase V (Eng V)
species: Humicola insolens [TaxId: 34413]

Probab=96.40  E-value=0.0016  Score=48.63  Aligned_cols=52  Identities=15%  Similarity=0.155  Sum_probs=36.0

Q ss_pred             EEEeCCCCCCCCcccCCeEEEEeccCCCCCccCCCCeEEEEEeecCCCCCCCCCCCCceEEeC
Q 032308           59 FAAAGDGIWDNGASCGRQYLVRCISASEPGTCEPEQTIQIRIVDYALQLESTPSVSGTTIVLS  121 (143)
Q Consensus        59 iaA~s~~~~~~g~~CG~c~~V~c~~~~~~~~C~~g~sV~V~V~D~Cp~c~~~~~~~~~~lDLS  121 (143)
                      +||.+-.-......|.+|||++-+++.     .+||+.+|+|++.--+-      ..+||||.
T Consensus        72 fAA~~~~g~~e~~~Cc~Cy~LtFTs~~-----~~GKkMiVQ~tNTGgDl------g~n~FDl~  123 (210)
T d2enga_          72 FAATSIAGSNEAGWCCACYELTFTSGP-----VAGKKMVVQSTSTGGDL------GSNHFDLN  123 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSGG-----GTTCEEEEEEEEC-----------CCEEEEE
T ss_pred             eeeeeecCCCccccccccEEEEeecCC-----cCCCEEEEEEeccCCcc------CCCeeeEe
Confidence            566665444445779999999987632     24899999999987653      56899985