Citrus Sinensis ID: 032320

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
Protein Sequence
MAKFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVTPKLTANSSSSSLLSTRREALTVSIVTTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST
Secondary Structure (PSIPRED)
ccEEEEEEEEEEccccccccccEEEEEEccccccccccccccEEEEccccccccccccccccccEEEEHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccEEEEEEEcccccccccccEEEEEEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEHHHccccccccccEEEEEcccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHccccccccEEEEEEccccccccccccEEEEEEEHHHHHHcccccccc
Coil and Loop (DISEMBL)
MAKFLVSYTWIqgagqgrerdhtmircfapvrsvhafhnhtirfvtpkltansssssLLSTRREALTVSIVTTTLEILISSFSASSSAAAAAAAELLelpnsggvkaldlrlgrgpvpvdgdqvAIHYYGRLaakqgwrfdst
Flexible Loop (DISEMBL)
MAKFLVSYTWiqgagqgrerDHTMIRCFAPVRSVHAFHNHTIRfvtpkltansssssllstrrEALTVSIVTTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRlaakqgwrfdst
Low Complexity Region (SEG)
MAKFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVTPKLTANsssssllsTRREALTVSIVTTTLEILIssfsasssaaaaaaaELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST
Disordered region (IsUnstruct)
***FLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVT******************ALTVSIVTTTLEILISSFS*******AAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWR****
Disordered Region (DISOPRED)
**KFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFV************************IVTTTLEILISSFSA*************ELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWR****
Disordered Region (DISEMBL)
MAKFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVTPKLT***********RREALTVSIVTTTLEILISSFS********AAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST
Disordered Region (DISPRO)
*AKFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVTPKLTA**SS*********ALTVSIVTTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRF***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAKFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVTPKLTANSSSSSLLSTRREALTVSIVTTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	143	2.2.26 [Sep-21-2011]
O81864	229	Peptidyl-prolyl cis-trans	yes	no	0.804	0.502	0.469	2e-20

>sp|O81864|FK171_ARATH Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-1 PE=2 SV=1

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 84/132 (63%), Gaps = 17/132 (12%)

Query: 24  MIRCFAPVRSVHAFHNHTIRFVTPK------------LTANSSSSSLLSTRREALTVSIV 71
           MIRCFA    V A    T+ F +P              +++SSSS++ +  R ++++SI+
Sbjct: 1   MIRCFAWTPLVGAPLITTVHFTSPPSLRIFASRSSAPSSSSSSSSTVAAASRRSISLSII 60

Query: 72  TTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGR 131
             T     SS  +S   ++ A A+  E+PNSGGVKALDLR+G G VP++GDQ+ IHYYGR
Sbjct: 61  AVT-----SSVVSSFCFSSPALADFSEIPNSGGVKALDLRIGDGDVPIEGDQIEIHYYGR 115

Query: 132 LAAKQGWRFDST 143
           LAAKQGWRFDST
Sbjct: 116 LAAKQGWRFDST 127

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 2EC: .EC: 1EC: .EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
225423674	220	PREDICTED: probable FKBP-type peptidyl-p	0.790	0.513	0.544	2e-22
297800068	229	hypothetical protein ARALYDRAFT_492887 [	0.839	0.524	0.496	4e-19
15235203	229	FKBP-like peptidyl-prolyl cis-trans isom	0.804	0.502	0.469	2e-18
449522925	225	PREDICTED: peptidyl-prolyl cis-trans iso	0.545	0.346	0.578	2e-18
449455431	225	PREDICTED: peptidyl-prolyl cis-trans iso	0.545	0.346	0.578	6e-18
356537045	232	PREDICTED: 39 kDa FK506-binding nuclear	0.566	0.349	0.522	1e-16
357136937	206	PREDICTED: FK506-binding protein 4-like	0.321	0.223	0.869	2e-16
326516052	168	predicted protein [Hordeum vulgare subsp	0.321	0.273	0.869	3e-16
326488763	207	predicted protein [Hordeum vulgare subsp	0.321	0.222	0.869	3e-16
115444473	213	Os02g0168700 [Oryza sativa Japonica Grou	0.321	0.215	0.869	6e-16

>gi|225423674|ref|XP_002276516.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase 7, chloroplastic [Vitis vinifera] gi|297737981|emb|CBI27182.3| unnamed protein product [Vitis vinifera]

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/125 (54%), Positives = 83/125 (66%), Gaps = 12/125 (9%)

Query: 24  MIRCFAPVRSVHAFHNHTIRFVTPK----LTANSSSSSLLSTRREALTVSIVTTTLEILI 79
           +IR  AP  ++   H+ T RF  PK    + A SSS +  ST R AL++S++        
Sbjct: 3   IIRWCAPPPTLLLPHHPTARFSCPKPPSVVYAKSSSPASSSTTRRALSLSLI-------F 55

Query: 80  SSFSASS-SAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGW 138
           SSF+ S  S++ AA +E  EL  SGGVKALDLR G G VPVDGDQVA+HYYGRLAAKQGW
Sbjct: 56  SSFTCSYYSSSEAATSEFFELQGSGGVKALDLRTGSGEVPVDGDQVAVHYYGRLAAKQGW 115

Query: 139 RFDST 143
           RFDST
Sbjct: 116 RFDST 120

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800068|ref|XP_002867918.1| hypothetical protein ARALYDRAFT_492887 [Arabidopsis lyrata subsp. lyrata] gi|297313754|gb|EFH44177.1| hypothetical protein ARALYDRAFT_492887 [Arabidopsis lyrata subsp. lyrata]

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 7/127 (5%)

Query: 24  MIRCFAPVRSVHAFHNHTIRFVTP---KLTANSSSSSLLSTRREALTVSIVTTTLEILI- 79
           MIRCFA +  + A    T+ F +P   ++ A+ S SS  S+   + TV+    ++ + I 
Sbjct: 1   MIRCFARIPLIGAPFISTVHFTSPPSIRIFASRSPSSSSSSSSSSSTVAASRRSISLTII 60

Query: 80  ---SSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQ 136
              SS  +S S ++ A AE  E+PNSGGVKALDLR G G VP++GDQ+ IHYYGRLAAKQ
Sbjct: 61  AVTSSVVSSVSFSSPALAEFSEIPNSGGVKALDLRTGDGEVPIEGDQIEIHYYGRLAAKQ 120

Query: 137 GWRFDST 143
           GWRFDST
Sbjct: 121 GWRFDST 127

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235203|ref|NP_193718.1| FKBP-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] gi|75100452|sp|O81864.1|FK171_ARATH RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic; Short=PPIase FKBP17-1; AltName: Full=FK506-binding protein 17-1; Short=AtFKBP17-1; AltName: Full=Immunophilin FKBP17-1; AltName: Full=Rotamase; Flags: Precursor gi|3250692|emb|CAA19700.1| putative protein [Arabidopsis thaliana] gi|6686800|emb|CAB64722.1| FKBP like protein [Arabidopsis thaliana] gi|7268779|emb|CAB78985.1| putative protein [Arabidopsis thaliana] gi|88196737|gb|ABD43011.1| At4g19830 [Arabidopsis thaliana] gi|332658831|gb|AEE84231.1| FKBP-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 84/132 (63%), Gaps = 17/132 (12%)

Query: 24  MIRCFAPVRSVHAFHNHTIRFVTPK------------LTANSSSSSLLSTRREALTVSIV 71
           MIRCFA    V A    T+ F +P              +++SSSS++ +  R ++++SI+
Sbjct: 1   MIRCFAWTPLVGAPLITTVHFTSPPSLRIFASRSSAPSSSSSSSSTVAAASRRSISLSII 60

Query: 72  TTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGR 131
             T     SS  +S   ++ A A+  E+PNSGGVKALDLR+G G VP++GDQ+ IHYYGR
Sbjct: 61  AVT-----SSVVSSFCFSSPALADFSEIPNSGGVKALDLRIGDGDVPIEGDQIEIHYYGR 115

Query: 132 LAAKQGWRFDST 143
           LAAKQGWRFDST
Sbjct: 116 LAAKQGWRFDST 127

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522925|ref|XP_004168476.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic-like [Cucumis sativus]

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 62/83 (74%), Gaps = 5/83 (6%)

Query: 63  REALTVSIVTTTLEILISSFSASSSAAAA--AAAELLELPNSGGVKALDLRLGRGPVPVD 120
           R AL+ S + +T    IS+F +SS AA +  AA +  +LP+S GVKAL+LR+G G  P+D
Sbjct: 37  RRALSFSALISTA---ISTFPSSSFAAPSKSAAPDFFDLPDSAGVKALELRIGSGETPID 93

Query: 121 GDQVAIHYYGRLAAKQGWRFDST 143
           GDQV +HYYGRLAAKQGWRFD+T
Sbjct: 94  GDQVVVHYYGRLAAKQGWRFDTT 116

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455431|ref|XP_004145456.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic-like [Cucumis sativus]

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 5/83 (6%)

Query: 63  REALTVSIVTTTLEILISSFSASSSAAAA--AAAELLELPNSGGVKALDLRLGRGPVPVD 120
           R AL+ S + +T    IS+F +SS AA +  AA +  +LP+S GVKAL+LR G G  P+D
Sbjct: 37  RRALSFSALISTA---ISTFPSSSFAAPSKSAAPDFFDLPDSAGVKALELRTGSGETPID 93

Query: 121 GDQVAIHYYGRLAAKQGWRFDST 143
           GDQV +HYYGRLAAKQGWRFD+T
Sbjct: 94  GDQVVVHYYGRLAAKQGWRFDTT 116

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537045|ref|XP_003537041.1| PREDICTED: 39 kDa FK506-binding nuclear protein-like [Glycine max]

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 7/88 (7%)

Query: 63  REALTVSIVTTTLEILISSFSASSSAAAAA-------AAELLELPNSGGVKALDLRLGRG 115
           R  L++S+++TT    I S    + ++++         ++  E+PNSGGVKAL+L  G G
Sbjct: 45  RRPLSLSLISTTFSAFIFSLPPPAPSSSSPFPSSKFPVSKFFEIPNSGGVKALELLDGSG 104

Query: 116 PVPVDGDQVAIHYYGRLAAKQGWRFDST 143
            VP DGDQVAIHYYGRLAAKQGWRFDST
Sbjct: 105 EVPSDGDQVAIHYYGRLAAKQGWRFDST 132

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357136937|ref|XP_003570059.1| PREDICTED: FK506-binding protein 4-like [Brachypodium distachyon]

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 43/46 (93%)

Query: 98  ELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
           E+P+SGGVKALDLR G G +PVDGDQVAIHYYGRLAAKQGWRFDST
Sbjct: 60  EIPSSGGVKALDLRDGSGEIPVDGDQVAIHYYGRLAAKQGWRFDST 105

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326516052|dbj|BAJ88049.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 43/46 (93%)

Query: 98  ELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
           E+P+SGGVKAL+LR G G VPVDGDQVAIHYYGRLAAKQGWRFDST
Sbjct: 61  EIPSSGGVKALELREGSGEVPVDGDQVAIHYYGRLAAKQGWRFDST 106

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326488763|dbj|BAJ97993.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 43/46 (93%)

Query: 98  ELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
           E+P+SGGVKAL+LR G G VPVDGDQVAIHYYGRLAAKQGWRFDST
Sbjct: 61  EIPSSGGVKALELREGSGEVPVDGDQVAIHYYGRLAAKQGWRFDST 106

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115444473|ref|NP_001046016.1| Os02g0168700 [Oryza sativa Japonica Group] gi|49388601|dbj|BAD25716.1| putative immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase [Oryza sativa Japonica Group] gi|113535547|dbj|BAF07930.1| Os02g0168700 [Oryza sativa Japonica Group] gi|215692588|dbj|BAG88008.1| unnamed protein product [Oryza sativa Japonica Group] gi|218190144|gb|EEC72571.1| hypothetical protein OsI_06011 [Oryza sativa Indica Group] gi|222622258|gb|EEE56390.1| hypothetical protein OsJ_05539 [Oryza sativa Japonica Group]

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 41/46 (89%)

Query: 98  ELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
           E+P SGGVKALDLR G G VP DGDQVAIHYYGRLAAKQGWRFDST
Sbjct: 67  EIPGSGGVKALDLREGPGEVPADGDQVAIHYYGRLAAKQGWRFDST 112

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
TAIR|locus:2134035	229	AT4G19830 "AT4G19830" [Arabido	0.804	0.502	0.409	1.2e-19
UNIPROTKB|Q6H6D3	213	P0669G09.14 "Peptidyl-prolyl c	0.538	0.361	0.548	2e-17
UNIPROTKB|A8JEI4	181	FKB16-8 "Peptidyl-prolyl cis-t	0.328	0.259	0.387	0.00064

TAIR|locus:2134035 AT4G19830 "AT4G19830" [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 54/132 (40%), Positives = 73/132 (55%)

Query:    24 MIRCFA--P------VRSVHAFHNHTIRFVTPKLTANXXXXXXXXT----RREALTVSIV 71
             MIRCFA  P      + +VH     ++R    + +A         T     R ++++SI+
Sbjct:     1 MIRCFAWTPLVGAPLITTVHFTSPPSLRIFASRSSAPSSSSSSSSTVAAASRRSISLSII 60

Query:    72 TTTLEILIXXXXXXXXXXXXXXXELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGR 131
               T  ++                +  E+PNSGGVKALDLR+G G VP++GDQ+ IHYYGR
Sbjct:    61 AVTSSVV-----SSFCFSSPALADFSEIPNSGGVKALDLRIGDGDVPIEGDQIEIHYYGR 115

Query:   132 LAAKQGWRFDST 143
             LAAKQGWRFDST
Sbjct:   116 LAAKQGWRFDST 127

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IBA

GO:0005528 "FK506 binding" evidence=ISS;IBA

GO:0006457 "protein folding" evidence=IEA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0016020 "membrane" evidence=IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

UNIPROTKB|Q6H6D3 P0669G09.14 "Peptidyl-prolyl cis-trans isomerase" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 45/82 (54%), Positives = 48/82 (58%)

Query:    62 RREALTVSIVTTTLEILIXXXXXXXXXXXXXXXELLELPNSGGVKALDLRLGRGPVPVDG 121
             RR  L  S  +T     +                  E+P SGGVKALDLR G G VP DG
Sbjct:    36 RRHLLLASAAST-----LPAAAAAASASAAAAPSFAEIPGSGGVKALDLREGPGEVPADG 90

Query:   122 DQVAIHYYGRLAAKQGWRFDST 143
             DQVAIHYYGRLAAKQGWRFDST
Sbjct:    91 DQVAIHYYGRLAAKQGWRFDST 112

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|A8JEI4 FKB16-8 "Peptidyl-prolyl cis-trans isomerase" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 88 (36.0 bits), Expect = 0.00064, P = 0.00064
 Identities = 19/49 (38%), Positives = 27/49 (55%)

Query:    95 ELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
             + + LP+  G+K L +R G G  P  GD V +H+ G     QG R D+T
Sbjct:    23 DFVTLPS--GIKVLTIREGEGATPQPGDTVEVHWAGFTKGYQGKRIDNT 69


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      143       120   0.00091  102 3  11 22  0.45    30
                                                     29  0.48    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  580 (62 KB)
  Total size of DFA:  126 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.80u 0.21s 9.01t   Elapsed:  00:00:00
  Total cpu time:  8.80u 0.21s 9.01t   Elapsed:  00:00:00
  Start:  Sat May 11 01:25:56 2013   End:  Sat May 11 01:25:56 2013

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00030155001 RecName- Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; (220 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	143
COG0545	205	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans	7e-05

>gnl|CDD|223619 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 40.5 bits (95), Expect = 7e-05
 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 11/71 (15%)

Query: 81  SFSASSSAAAAAAAE--LLELPNSGGVKAL-------DLRLGRGPVPVDGDQVAIHYYGR 131
           +  A  +AA AA  +  L +     GVK L        L+ G G  P  GD V +HY G 
Sbjct: 70  AKRAKDAAANAAEGKAFLEKNAKEKGVKTLPSGLQYKVLKAGDGAAPKKGDTVTVHYTGT 129

Query: 132 LAAKQGWRFDS 142
           L    G  FDS
Sbjct: 130 LI--DGTVFDS 138

Length = 205

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	143
COG0545	205	FkpA FKBP-type peptidyl-prolyl cis-trans isomerase	99.13
KOG0544	108	consensus FKBP-type peptidyl-prolyl cis-trans isom	98.88
PRK11570	206	peptidyl-prolyl cis-trans isomerase; Provisional	98.8
PRK10902	269	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	98.61
KOG0552	226	consensus FKBP-type peptidyl-prolyl cis-trans isom	98.5
TIGR03516	177	ppisom_GldI peptidyl-prolyl isomerase, gliding mot	98.39
KOG0549	188	consensus FKBP-type peptidyl-prolyl cis-trans isom	97.96
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	95.94

>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

Probab=99.13  E-value=8.1e-11  Score=96.23  Aligned_cols=43  Identities=37%  Similarity=0.619  Sum_probs=40.7

Q ss_pred             cCCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           99 LPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        99 l~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ...++||+|++++.|+|+.|+.||+|.|||+|+|.|  |++||||
T Consensus        97 ~~~~sgl~y~~~~~G~G~~~~~~~~V~vhY~G~l~~--G~vFDsS  139 (205)
T COG0545          97 KTLPSGLQYKVLKAGDGAAPKKGDTVTVHYTGTLID--GTVFDSS  139 (205)
T ss_pred             eECCCCcEEEEEeccCCCCCCCCCEEEEEEEEecCC--CCccccc
Confidence            457899999999999999999999999999999999  9999997

>KOG0544 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=98.88  E-value=2.8e-09  Score=79.18  Aligned_cols=38  Identities=39%  Similarity=0.726  Sum_probs=35.8

Q ss_pred             CcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       104 GL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      |+.++++.+|+|. .|++||+|+|||+|.|.|  |++||||
T Consensus         2 Gv~~~~i~~Gdg~tfpK~Gqtvt~hYtg~L~d--G~kfDSs   40 (108)
T KOG0544|consen    2 GVEKQVISPGDGRTFPKKGQTVTVHYTGTLQD--GKKFDSS   40 (108)
T ss_pred             CceeEEeeCCCCcccCCCCCEEEEEEEeEecC--CcEeecc
Confidence            7899999999995 799999999999999998  9999997

>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional

Probab=98.80  E-value=8.4e-09  Score=83.50  Aligned_cols=43  Identities=35%  Similarity=0.614  Sum_probs=40.0

Q ss_pred             cCCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           99 LPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        99 l~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ..+++||+|+++++|+|..|+.||.|.|||+|++.|  |++||||
T Consensus        98 ~~t~sGl~y~vi~~G~G~~p~~~d~V~v~Y~g~l~d--G~vfdss  140 (206)
T PRK11570         98 NSTESGLQFRVLTQGEGAIPARTDRVRVHYTGKLID--GTVFDSS  140 (206)
T ss_pred             EECCCCcEEEEEeCCCCCCCCCCCEEEEEEEEEECC--CCEEEec
Confidence            356899999999999999999999999999999988  9999986

>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=98.61  E-value=6.3e-08  Score=81.50  Aligned_cols=42  Identities=33%  Similarity=0.529  Sum_probs=39.4

Q ss_pred             CCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .+++||+|+++++|+|..|+.||.|.|||+|++.|  |++||+|
T Consensus       143 ~t~sGl~y~Vi~~G~G~~p~~gD~V~V~Y~g~l~d--G~vfdss  184 (269)
T PRK10902        143 TTSTGLLYKVEKEGTGEAPKDSDTVVVNYKGTLID--GKEFDNS  184 (269)
T ss_pred             ECCCccEEEEEeCCCCCCCCCCCEEEEEEEEEeCC--CCEeecc
Confidence            46899999999999999999999999999999988  9999985

>KOG0552 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=98.50  E-value=1.7e-07  Score=77.75  Aligned_cols=43  Identities=40%  Similarity=0.757  Sum_probs=39.5

Q ss_pred             CCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      +.+.||+|++++.|+|+.++.|+.|.|||.|+|.+ +|++||++
T Consensus       117 tl~~Gl~y~D~~vG~G~~a~~G~rV~v~Y~Gkl~~-~GkvFd~~  159 (226)
T KOG0552|consen  117 TLPGGLRYEDLRVGSGPSAKKGKRVSVRYIGKLKG-NGKVFDSN  159 (226)
T ss_pred             ecCCCcEEEEEEecCCCCCCCCCEEEEEEEEEecC-CCeEeecc
Confidence            45799999999999999999999999999999984 39999984

>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated

Probab=98.39  E-value=6.1e-07  Score=71.18  Aligned_cols=43  Identities=26%  Similarity=0.200  Sum_probs=38.4

Q ss_pred             cCCCCCcEEEEeEc--CCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           99 LPNSGGVKALDLRL--GRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        99 l~~~sGL~~~iLk~--GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .++++|++|.++++  |+|..|+.||.|.+||+|++.|  |++||++
T Consensus        65 ~~t~sGl~Y~v~~~~~g~g~~p~~gd~V~v~Y~~~~~d--G~v~~ss  109 (177)
T TIGR03516        65 ETSQNGFWYYYNQKDTGEGTTPEFGDLVTFEYDIRALD--GDVIYSE  109 (177)
T ss_pred             eECCCccEEEEEEecCCCCCcCCCCCEEEEEEEEEeCC--CCEEEeC
Confidence            46789999998876  7778999999999999999988  9999985

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.

>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=97.96  E-value=1.3e-05  Score=65.09  Aligned_cols=40  Identities=28%  Similarity=0.415  Sum_probs=33.5

Q ss_pred             CCCcEEEEeEc--CCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          102 SGGVKALDLRL--GRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       102 ~sGL~~~iLk~--GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .++|++.+++.  .+..+.+.||+|.+||+|.|.|  |++||||
T Consensus        67 ~~~l~I~v~~~p~~C~~kak~GD~l~~HY~g~leD--Gt~fdSS  108 (188)
T KOG0549|consen   67 DEELQIGVLKKPEECPEKAKKGDTLHVHYTGSLED--GTKFDSS  108 (188)
T ss_pred             CCceeEEEEECCccccccccCCCEEEEEEEEEecC--CCEEeee
Confidence            35667766663  3778999999999999999998  9999997

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=95.94  E-value=0.014  Score=52.36  Aligned_cols=39  Identities=36%  Similarity=0.617  Sum_probs=34.5

Q ss_pred             CCCcEEEEeEcCCC--CCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          102 SGGVKALDLRLGRG--PVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       102 ~sGL~~~iLk~GsG--~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      +.+|..+++++|.|  ..|.+|..|.|||.|++.|  + +||++
T Consensus        83 Dg~iiKriir~G~gd~~~P~~g~~V~v~~~G~~~~--~-~f~~~  123 (397)
T KOG0543|consen   83 DGGIIKRIIREGEGDYSRPNKGAVVKVHLEGELED--G-VFDQR  123 (397)
T ss_pred             CCceEEeeeecCCCCCCCCCCCcEEEEEEEEEECC--c-ceecc
Confidence            67899999999999  6899999999999999976  5 78763

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	143
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	3e-07
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	2e-06
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	3e-06
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	3e-06
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	4e-06
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	6e-06
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	7e-06
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	8e-06
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	9e-06
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	1e-05
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	2e-05
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	2e-05
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	3e-05
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	3e-05
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	3e-05
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	4e-05
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	8e-05
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	2e-04
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	2e-04
2ppn_A	107	FK506-binding protein 1A; high resolution protein	2e-04
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	2e-04
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	3e-04
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	4e-04
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	8e-04

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens} Length = 134

 Score = 45.3 bits (108), Expect = 3e-07
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 83  SASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDS 142
           +   S     +  +L++    GV    +R G G +      V + Y G L       FDS
Sbjct: 6   APGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYL-EHMDRPFDS 64

Query: 143 T 143
            
Sbjct: 65  N 65

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A* Length = 133

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 9/66 (13%)

Query: 84  ASSSAAAAAAAELLELPNSGGVKAL-------DLRLGRGPVPVDGDQVAIHYYGRLAAKQ 136
            SS      ++ L+   +   V          DL  G G     G  V++HY G L    
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLT--D 59

Query: 137 GWRFDS 142
           G +FDS
Sbjct: 60  GQKFDS 65

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 135

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 88  AAAAAAAELLELPNSGGVKALDLRLGRGPV--PVDGDQVAIHYYGRLAAKQGWRFDS 142
           ++ ++  E L++  +G ++   L  G      PV G  V +H    L  + G R   
Sbjct: 2   SSGSSGEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSL--ENGTRVQE 56

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens} Length = 157

 Score = 43.2 bits (102), Expect = 3e-06
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 85  SSSAAAAAAAELLELPNSGGVKALDLRLGRGPV--PVDGDQVAIHYYGRLAAKQGWRFDS 142
              A A A  E L++  +G ++   L  G      PV G  V +H    L  + G R   
Sbjct: 25  PEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSL--ENGTRVQE 82

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A Length = 118

 Score = 42.2 bits (100), Expect = 4e-06
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 91  AAAAELLELPNSGGVKALDLRLGRGPV--PVDGDQVAIHYYGRLAAKQGWRFDS 142
            +  E L++  +G ++   L  G      PV G  V +H    L  + G R   
Sbjct: 1   GSPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSL--ENGTRVQE 52

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A Length = 129

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 89  AAAAAAELLELPNSGGVKALDLRLG---RGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
                 E +EL   GGV    L+ G      +P  G++V +HY G+L    G  FDS+
Sbjct: 2   TTEQEFEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKL-ESTGKVFDSS 58

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana} Length = 180

 Score = 42.5 bits (100), Expect = 7e-06
 Identities = 8/41 (19%), Positives = 13/41 (31%), Gaps = 1/41 (2%)

Query: 103 GGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
             V    ++ G G  P       +HY          +F+ T
Sbjct: 49  EKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNS-QHKFEDT 88

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A Length = 129

 Score = 41.6 bits (98), Expect = 8e-06
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 102 SGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDS 142
             G+   D  +G GP  V G  +  HY G+L  + G  FDS
Sbjct: 11  PSGLAFCDKVVGYGPEAVKGQLIKAHYVGKL--ENGKVFDS 49

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 1euv_B 3v60_A 3v61_A 3v62_A* Length = 209

 Score = 42.5 bits (100), Expect = 9e-06
 Identities = 18/65 (27%), Positives = 24/65 (36%), Gaps = 6/65 (9%)

Query: 82  FSASSSAAAAAAAELLELPN----SGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQG 137
                +    A  E +          G+K  DL  G G     G  V++HY G L    G
Sbjct: 79  LDMEDNDIIEAHREQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWL--TDG 136

Query: 138 WRFDS 142
            +FDS
Sbjct: 137 QKFDS 141

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A Length = 128

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 86  SSAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDS 142
           + A      E +      GV  +  R+G G   P+ GD+V +HY G+L    G +FDS
Sbjct: 2   APATVTEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKL--SNGKKFDS 57

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 85  SSSAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST 143
           S +A  A   E +      GV  +  R+G G   P+ GD+V +HY G+L+   G +FDS+
Sbjct: 13  SPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSS 70

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A Length = 144

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 84  ASSSAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDS 142
            S +A  A   E +      GV  +  R+G G   P+ GD+V +HY G+L    G +FDS
Sbjct: 16  ESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKL--SNGKKFDS 73

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A Length = 224

 Score = 41.3 bits (97), Expect = 3e-05
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 9/67 (13%)

Query: 84  ASSSAAAAAAAELLELPNSGGVKALD-------LRLGRGPVPVDGDQVAIHYYGRLAAKQ 136
            ++   A       +     GVK          +  G+G  P D D V ++Y G L    
Sbjct: 95  DAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLI--D 152

Query: 137 GWRFDST 143
           G  FD++
Sbjct: 153 GKEFDNS 159

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A* Length = 213

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 9/67 (13%)

Query: 84  ASSSAAAAAAAELLELPNSGGVKALD-------LRLGRGPVPVDGDQVAIHYYGRLAAKQ 136
            +        A L E  N  GV  L        +  G G  P   D V + Y GRL    
Sbjct: 80  KADENKVKGEAFLTENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLI--D 137

Query: 137 GWRFDST 143
           G  FDST
Sbjct: 138 GTVFDST 144

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Length = 280

 Score = 41.4 bits (97), Expect = 3e-05
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 83  SASSSAAAAAAAELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFD 141
           S + SA        +      GV  +  R G G  +P+ GD+V +HY G L    G +FD
Sbjct: 31  SGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWL--LDGTKFD 88

Query: 142 ST 143
           S+
Sbjct: 89  SS 90

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1 Length = 113

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 102 SGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDS 142
            G VK   +  G G   P  GD V IHY G L  + G +FDS
Sbjct: 5   EGNVKIDRISPGDGATFPKTGDLVTIHYTGTL--ENGQKFDS 44

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} Length = 219

 Score = 39.7 bits (93), Expect = 8e-05
 Identities = 23/95 (24%), Positives = 33/95 (34%), Gaps = 18/95 (18%)

Query: 65  ALTVSIVTTTLEILISSFSASSSAAAAAAAE---------LLELPNSGGVKALD------ 109
           AL    +   L    ++ + + +A   A  E         +       GVK L       
Sbjct: 63  ALKQERIDQILREHDAAIAQAETAGTDAPTEAALKAERTFMAGEKAKPGVKELADGILMT 122

Query: 110 -LRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
            L  G GP P    +V + Y GRL    G  FD +
Sbjct: 123 ELTPGTGPKPDANGRVEVRYVGRLP--DGKIFDQS 155

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1 Length = 135

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 103 GGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDS 142
           GGV  L  + G+G V P  G  V +HY G L  + G +FDS
Sbjct: 14  GGVLKLIKKEGQGVVKPTTGTTVKVHYVGTL--ENGTKFDS 52

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} Length = 338

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 2/73 (2%)

Query: 71  VTTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYG 130
           + T    ++ S  +             E+ +   V    ++ G G  P       +HY  
Sbjct: 18  IVTEGSAVVHSEPSQEGNVPPKVDSEAEVLD-EKVSKQIIKEGHGSKPSKYSTCFLHYRA 76

Query: 131 RLAAKQGWRFDST 143
                   +F+ T
Sbjct: 77  WTKN-SQHKFEDT 88

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ... Length = 107

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)

Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDS 142
           GV+   +  G G   P  G    +HY G L  + G +FDS
Sbjct: 1   GVQVETISPGDGRTFPKRGQTCVVHYTGML--EDGKKFDS 38

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 103 GGVKALDLRLGRG-PVPVDGDQVAIHYYGRLAAKQGWRFDST 143
            G+K   L+ G G   P  GD+V +HY G L    G +FDS+
Sbjct: 11  QGLKKKLLKEGEGWDTPEVGDEVEVHYTGTL--LDGKKFDSS 50

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens} Length = 102

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 113 GRGPVPVDGDQVAIHYYGRLAAKQGWRFDS 142
           G       GD + +HY G+L  + G  FDS
Sbjct: 1   GSPIKSRKGDVLHMHYTGKL--EDGTEFDS 28

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia} Length = 130

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)

Query: 102 SGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDS 142
           S  ++   L  G G   P  G +V +HY GR     G +FDS
Sbjct: 23  SAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRF--PDGKQFDS 62

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} PDB: 1pbk_A* Length = 119

 Score = 36.1 bits (84), Expect = 8e-04
 Identities = 12/40 (30%), Positives = 14/40 (35%), Gaps = 3/40 (7%)

Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDS 142
                 L+ G     P  GD V   Y G L    G  FD+
Sbjct: 5   KYTKSILKKGDKTNFPKKGDVVHCWYTGTL--PDGTVFDT 42

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	143
2lkn_A	165	AH receptor-interacting protein; FKBP-type domain,	98.97
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	98.86
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	98.83
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	98.8
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	98.79
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	98.79
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	98.78
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	98.78
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	98.77
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	98.77
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	98.76
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	98.74
2ppn_A	107	FK506-binding protein 1A; high resolution protein	98.72
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	98.7
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	98.7
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	98.68
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	98.63
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	98.62
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	98.6
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	98.58
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	98.52
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	98.46
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	98.43
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	98.4
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	98.35
1p5q_A	336	FKBP52, FK506-binding protein 4; isomerase; 2.80A	98.35
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	98.22
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	98.13
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	97.75
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	97.4
1hxv_A	113	Trigger factor; FKBP fold, ppiase, chaperone; NMR	97.3
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	96.67
1t11_A	392	Trigger factor, TF; helix-turn-helix, four-helix-b	92.88
1w26_A	432	Trigger factor, TF; chaperone, protein folding, ri	92.84

>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}

Probab=98.97  E-value=1.2e-10  Score=90.38  Aligned_cols=43  Identities=26%  Similarity=0.522  Sum_probs=38.0

Q ss_pred             CCCCcEEEEeEcCCCCCC--CCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          101 NSGGVKALDLRLGRGPVP--VDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       101 ~~sGL~~~iLk~GsG~~P--k~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      +.+||+|+++++|+|..|  ++||+|.|||+|+|.|.+|++||||
T Consensus         8 ~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS   52 (165)
T 2lkn_A            8 REDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDS   52 (165)
T ss_dssp             HTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEES
T ss_pred             cCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEec
Confidence            468999999999999754  6899999999999976569999997

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*

Probab=98.86  E-value=2.9e-09  Score=75.87  Aligned_cols=41  Identities=29%  Similarity=0.398  Sum_probs=37.7

Q ss_pred             CCCCcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          101 NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       101 ~~sGL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .|+||+++++++|+|. .|+.||.|.|||+|++.|  |++||+|
T Consensus         2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~d--G~~fdss   43 (119)
T 3kz7_A            2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPD--GTVFDTN   43 (119)
T ss_dssp             CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTT--SCEEEEC
T ss_pred             CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECC--CCEEEec
Confidence            4689999999999996 699999999999999987  9999985

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A

Probab=98.83  E-value=2.6e-09  Score=77.85  Aligned_cols=42  Identities=36%  Similarity=0.618  Sum_probs=38.8

Q ss_pred             CCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .+++||+|+++++|+|..|+.||.|.|||+|++.|  |++||+|
T Consensus         9 ~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~d--G~~fdss   50 (129)
T 1u79_A            9 VSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLEN--GKVFDSS   50 (129)
T ss_dssp             ECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTT--SCEEEEH
T ss_pred             ECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECC--CCEEEec
Confidence            45789999999999999999999999999999977  9999974

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1

Probab=98.80  E-value=5.1e-09  Score=74.17  Aligned_cols=41  Identities=44%  Similarity=0.707  Sum_probs=37.9

Q ss_pred             CCCCcEEEEeEcCCCCC-CCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          101 NSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       101 ~~sGL~~~iLk~GsG~~-Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .++|++|+++++|+|.. |+.||.|.|||+|++.|  |++||+|
T Consensus         4 ~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~d--G~~~d~s   45 (113)
T 1yat_A            4 IEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLEN--GQKFDSS   45 (113)
T ss_dssp             CGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETT--SCEEEES
T ss_pred             CCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECC--CCEEEec
Confidence            46899999999999998 99999999999999977  9999975

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}

Probab=98.79  E-value=3.9e-09  Score=77.67  Aligned_cols=52  Identities=25%  Similarity=0.383  Sum_probs=44.8

Q ss_pred             HhhhhccccCCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           91 AAAAELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        91 a~~~~f~~l~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .-+.+..++..++||+|+++++|+|..++.||.|.|||+|++.+ +|++||+|
T Consensus        14 ~~~~~~~~v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~-~G~~fdss   65 (134)
T 3b7x_A           14 RLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEH-MDRPFDSN   65 (134)
T ss_dssp             HHTTTCEESSSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTT-CSSCSEEC
T ss_pred             HhccccceeeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECC-CCeEEEec
Confidence            34556667788999999999999999999999999999999972 29999975

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1

Probab=98.79  E-value=3.3e-09  Score=81.77  Aligned_cols=42  Identities=33%  Similarity=0.526  Sum_probs=39.2

Q ss_pred             CCCCCcEEEEeEcCCCCC-CCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~~-Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .+++||+|+++++|+|.. |+.||.|.|||+|++.|  |++||+|
T Consensus        34 ~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~d--G~~fdss   76 (167)
T 1jvw_A           34 KLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRD--GTVFDSS   76 (167)
T ss_dssp             ECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTT--SCEEEEH
T ss_pred             ECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECC--CCEEeec
Confidence            567999999999999998 99999999999999988  9999974

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*

Probab=98.78  E-value=4.7e-09  Score=83.89  Aligned_cols=43  Identities=35%  Similarity=0.516  Sum_probs=39.9

Q ss_pred             cCCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           99 LPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        99 l~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ..+++||+|+++++|+|..|+.||.|.|||+|++.|  |++||+|
T Consensus       102 ~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~d--G~vfdss  144 (213)
T 1fd9_A          102 VVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLID--GTVFDST  144 (213)
T ss_dssp             EECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETT--SCEEEEH
T ss_pred             EECCCccEEEEEecCCCccCCCCCEEEEEEEEEECC--CCEEeec
Confidence            356899999999999999999999999999999988  9999974

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0

Probab=98.78  E-value=5.4e-09  Score=84.32  Aligned_cols=42  Identities=33%  Similarity=0.604  Sum_probs=39.7

Q ss_pred             CCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ++++||+|+++++|+|+.|+.||.|.|||+|++.|  |++||+|
T Consensus       114 ~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~d--G~vfDss  155 (219)
T 3oe2_A          114 ELADGILMTELTPGTGPKPDANGRVEVRYVGRLPD--GKIFDQS  155 (219)
T ss_dssp             ECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTT--SCEEEEC
T ss_pred             ECCCCeEEEEEecCCCccCCCCCEEEEEEEEEECC--CCEeecc
Confidence            46899999999999999999999999999999988  9999986

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}

Probab=98.77  E-value=9.3e-09  Score=74.11  Aligned_cols=45  Identities=31%  Similarity=0.247  Sum_probs=40.1

Q ss_pred             cccCCCCCcEEEEeEcCC--CCCCCCCCEEEEEEEEEEc-CCCCCcccCC
Q 032320           97 LELPNSGGVKALDLRLGR--GPVPVDGDQVAIHYYGRLA-AKQGWRFDST  143 (143)
Q Consensus        97 ~~l~~~sGL~~~iLk~Gs--G~~Pk~GDtV~VhYtG~L~-d~~GkvFDSS  143 (143)
                      ..+.+++|++|+++++|+  |..|+.||.|.|||+|++. |  |++||+|
T Consensus         6 ~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~d--G~~fdss   53 (125)
T 4dip_A            6 GALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKD--GSLFHST   53 (125)
T ss_dssp             GGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTT--CCEEEEH
T ss_pred             ceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCC--CcEEEEc
Confidence            344678999999999998  8899999999999999997 6  9999974

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}

Probab=98.77  E-value=5.4e-09  Score=76.81  Aligned_cols=46  Identities=35%  Similarity=0.541  Sum_probs=41.1

Q ss_pred             ccccCCCCCcEEE--EeEcCCCCC-CCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           96 LLELPNSGGVKAL--DLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        96 f~~l~~~sGL~~~--iLk~GsG~~-Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      +...++++|++|+  ++++|+|.. |+.||.|.|||+|++.|  |++||+|
T Consensus        15 ~~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~d--G~~fdss   63 (130)
T 2lgo_A           15 QTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPD--GKQFDSS   63 (130)
T ss_dssp             SSCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTT--SCEEECT
T ss_pred             ccceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECC--CCEEEcc
Confidence            3445778999999  999999998 99999999999999977  9999985

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*

Probab=98.76  E-value=8.7e-09  Score=76.08  Aligned_cols=42  Identities=38%  Similarity=0.645  Sum_probs=39.0

Q ss_pred             CCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .+++|++|+++++|+|..|+.||.|.|||+|++.|  |++||+|
T Consensus        25 ~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~d--G~~fdss   66 (133)
T 2y78_A           25 TTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTD--GQKFDSS   66 (133)
T ss_dssp             ECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETT--SCEEEET
T ss_pred             ECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECC--CCEEecc
Confidence            46789999999999999999999999999999977  9999975

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1

Probab=98.74  E-value=1e-08  Score=75.46  Aligned_cols=41  Identities=41%  Similarity=0.723  Sum_probs=38.1

Q ss_pred             CCCCcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          101 NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       101 ~~sGL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .++||+|+++++|+|. .|+.||.|.|||+|++.|  |++||+|
T Consensus        12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~d--G~~fdss   53 (135)
T 1r9h_A           12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLEN--GTKFDSS   53 (135)
T ss_dssp             CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETT--SCEEEEH
T ss_pred             CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECC--CCEEEec
Confidence            7899999999999997 699999999999999977  9999974

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...

Probab=98.72  E-value=1.1e-08  Score=71.42  Aligned_cols=38  Identities=37%  Similarity=0.694  Sum_probs=35.4

Q ss_pred             CcEEEEeEcCCCCC-CCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          104 GVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       104 GL~~~iLk~GsG~~-Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ||+|+++++|+|.. |+.||.|.|||+|++.|  |++||+|
T Consensus         1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~d--G~~~d~s   39 (107)
T 2ppn_A            1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLED--GKKFDSS   39 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEETT--SCEEEEH
T ss_pred             CcEEEEEECcCCCcCCCCCCEEEEEEEEEECC--CCEEEec
Confidence            78999999999987 99999999999999977  9999974

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A

Probab=98.70  E-value=2.2e-08  Score=72.79  Aligned_cols=43  Identities=40%  Similarity=0.713  Sum_probs=38.9

Q ss_pred             cCCCCCcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           99 LPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        99 l~~~sGL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .+.++||+++++++|+|. .|+.||.|.|||+|++.|  |++||+|
T Consensus        15 ~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~d--G~~fdss   58 (128)
T 3o5q_A           15 SKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN--GKKFDSS   58 (128)
T ss_dssp             SSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETT--SCEEEEH
T ss_pred             ccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECC--CCEEEec
Confidence            347789999999999997 699999999999999987  9999974

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A

Probab=98.70  E-value=1.6e-08  Score=81.38  Aligned_cols=41  Identities=34%  Similarity=0.607  Sum_probs=38.8

Q ss_pred             CCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          101 NSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       101 ~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      +++||+|+++++|+|..|+.||.|.|||+|++.|  |++||+|
T Consensus       119 ~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~d--G~vfdss  159 (224)
T 1q6h_A          119 SSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLID--GKEFDNS  159 (224)
T ss_dssp             CTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETT--SCEEEEG
T ss_pred             CCCceEEEEEecccCccccCCCEEEEEEEEEeCC--CCEEeec
Confidence            5799999999999999999999999999999988  9999985

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A

Probab=98.68  E-value=2.1e-08  Score=74.69  Aligned_cols=42  Identities=40%  Similarity=0.746  Sum_probs=38.7

Q ss_pred             CCCCCcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ..++||+++++++|+|. .|+.||.|.|||+|++.|  |++||+|
T Consensus        32 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~d--G~~fdss   74 (144)
T 3o5e_A           32 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN--GKKFDSS   74 (144)
T ss_dssp             SCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTT--SCEEEES
T ss_pred             cCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECC--CCEEEee
Confidence            36889999999999997 799999999999999987  9999985

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*

Probab=98.63  E-value=3.2e-08  Score=78.31  Aligned_cols=43  Identities=37%  Similarity=0.644  Sum_probs=39.9

Q ss_pred             cCCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           99 LPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        99 l~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .++++|++|+++++|+|..|+.||.|.|||+|++.|  |++||+|
T Consensus       100 ~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~d--G~~fdss  142 (209)
T 3uf8_A          100 VTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTD--GQKFDSS  142 (209)
T ss_dssp             EECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETT--SCEEEES
T ss_pred             cCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECC--CCEEEEc
Confidence            347899999999999999999999999999999987  9999985

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A

Probab=98.62  E-value=4.5e-08  Score=70.01  Aligned_cols=46  Identities=28%  Similarity=0.408  Sum_probs=38.4

Q ss_pred             hccccCCCCCcEEEEeEcCCCC--CCCCCCEEEEEEEEEEcCCCCCcccC
Q 032320           95 ELLELPNSGGVKALDLRLGRGP--VPVDGDQVAIHYYGRLAAKQGWRFDS  142 (143)
Q Consensus        95 ~f~~l~~~sGL~~~iLk~GsG~--~Pk~GDtV~VhYtG~L~d~~GkvFDS  142 (143)
                      ++..+..+.+++|+++++|+|.  .|+.||.|.|||+|++.|  |++||+
T Consensus         5 ~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~d--G~~~ds   52 (118)
T 2awg_A            5 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN--GTRVQE   52 (118)
T ss_dssp             CEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTT--SCEEEE
T ss_pred             cceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECC--CCEEEC
Confidence            4444444444999999999997  799999999999999977  999986

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=3.5e-08  Score=72.61  Aligned_cols=48  Identities=27%  Similarity=0.394  Sum_probs=40.0

Q ss_pred             hhhccccCCCCCcEEEEeEcCCCC--CCCCCCEEEEEEEEEEcCCCCCcccC
Q 032320           93 AAELLELPNSGGVKALDLRLGRGP--VPVDGDQVAIHYYGRLAAKQGWRFDS  142 (143)
Q Consensus        93 ~~~f~~l~~~sGL~~~iLk~GsG~--~Pk~GDtV~VhYtG~L~d~~GkvFDS  142 (143)
                      ..++..+..+.+++|+++++|+|.  .|+.||.|.|||+|++.|  |++||+
T Consensus         7 ~~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~d--G~~fds   56 (135)
T 2d9f_A            7 GEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN--GTRVQE   56 (135)
T ss_dssp             CSSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESS--SCEEEE
T ss_pred             cccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECC--CCEEec
Confidence            345555554444999999999997  899999999999999977  999986

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}

Probab=98.58  E-value=3.6e-08  Score=76.31  Aligned_cols=43  Identities=19%  Similarity=0.261  Sum_probs=38.4

Q ss_pred             CCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .+++||+|+++++|+|..|+.||.|.|||+|++.+ +|++||+|
T Consensus        46 ~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~-dG~~fdss   88 (180)
T 2f4e_A           46 VLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKN-SQHKFEDT   88 (180)
T ss_dssp             EEETTEEEEEEECCBSCCBCTTCEEEEEEEEEETT-TCCEEEET
T ss_pred             ECCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECC-CCcEEecc
Confidence            35689999999999999999999999999999963 29999975

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}

Probab=98.52  E-value=8.9e-08  Score=73.17  Aligned_cols=40  Identities=28%  Similarity=0.392  Sum_probs=36.5

Q ss_pred             CCCCc-EEEEeEcCCCC--CCCCCCEEEEEEEEEEcCCCCCcccC
Q 032320          101 NSGGV-KALDLRLGRGP--VPVDGDQVAIHYYGRLAAKQGWRFDS  142 (143)
Q Consensus       101 ~~sGL-~~~iLk~GsG~--~Pk~GDtV~VhYtG~L~d~~GkvFDS  142 (143)
                      +++|+ +|+++++|+|.  .|+.||.|.|||+|++.|  |++||+
T Consensus        40 ~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~d--G~~fds   82 (157)
T 2jwx_A           40 LGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN--GTRVQE   82 (157)
T ss_dssp             SSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTT--SCEEEE
T ss_pred             CCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECC--CCEeec
Confidence            46786 79999999997  899999999999999977  999996

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}

Probab=98.46  E-value=9.7e-08  Score=77.19  Aligned_cols=44  Identities=18%  Similarity=0.234  Sum_probs=38.8

Q ss_pred             cCCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           99 LPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        99 l~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ...++||+++++++|+|..|+.||.|.|||+|++.+ +|++||+|
T Consensus        45 ~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~-~g~~fd~~   88 (338)
T 2if4_A           45 EVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKN-SQHKFEDT   88 (338)
T ss_dssp             EEEETTEEEEEEECCBSCCCCTTCEEEEEEEEEETT-TCCCCEEH
T ss_pred             eeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcC-CCcEeecc
Confidence            345789999999999999999999999999999963 28999974

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=98.43  E-value=2.5e-07  Score=75.87  Aligned_cols=41  Identities=41%  Similarity=0.650  Sum_probs=38.3

Q ss_pred             CCCCcEEEEeEcCCCCC-CCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          101 NSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       101 ~~sGL~~~iLk~GsG~~-Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .++||+|+++++|+|.. |+.||.|.|||+|++.|  |++||+|
T Consensus        49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~d--G~~fdss   90 (280)
T 1q1c_A           49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLD--GTKFDSS   90 (280)
T ss_dssp             CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETT--SCEEEES
T ss_pred             CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECC--CCEEEec
Confidence            67899999999999987 99999999999999977  9999985

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=98.40  E-value=1.2e-07  Score=79.86  Aligned_cols=41  Identities=41%  Similarity=0.754  Sum_probs=22.6

Q ss_pred             CCCCcEEEEeEcCCCCC-CCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          101 NSGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       101 ~~sGL~~~iLk~GsG~~-Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      +++||+++++++|+|.. |+.||.|.|||+|++.|  |++||+|
T Consensus        29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~--g~~~dss   70 (457)
T 1kt0_A           29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN--GKKFDSS   70 (457)
T ss_dssp             ----CEEEC--------CCCBTCEEEEEEEEEC-------CBC-
T ss_pred             CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECC--CCEEecc
Confidence            68899999999999987 99999999999999977  9999985

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A

Probab=98.35  E-value=4.1e-07  Score=65.85  Aligned_cols=41  Identities=34%  Similarity=0.639  Sum_probs=33.7

Q ss_pred             CCCCcEE-EEeEcC---CCCCCCCCCEEEEEEEEEE-cCCCCCcccCC
Q 032320          101 NSGGVKA-LDLRLG---RGPVPVDGDQVAIHYYGRL-AAKQGWRFDST  143 (143)
Q Consensus       101 ~~sGL~~-~iLk~G---sG~~Pk~GDtV~VhYtG~L-~d~~GkvFDSS  143 (143)
                      +++|++| +++++|   +|..|+.||.|.|||+|++ .|  |++||+|
T Consensus        13 ~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~d--G~~fd~s   58 (129)
T 2vn1_A           13 TADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLEST--GKVFDSS   58 (129)
T ss_dssp             STTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTT--CCEEEEG
T ss_pred             CCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCC--CeEEEec
Confidence            4567665 688865   5689999999999999999 56  9999975

>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A

Probab=98.35  E-value=4.2e-07  Score=73.23  Aligned_cols=44  Identities=23%  Similarity=0.308  Sum_probs=38.0

Q ss_pred             cccCCCCCcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           97 LELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        97 ~~l~~~sGL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ..+..++||+++++++|+|. .|..||+|.|||+|++ +  |++||+|
T Consensus        19 ~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~--g~~fd~~   63 (336)
T 1p5q_A           19 SHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-K--DKLFDQR   63 (336)
T ss_dssp             ---CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-T--TEEEEEE
T ss_pred             eeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-C--CEEEecC
Confidence            34567899999999999997 7999999999999999 7  9999975

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=98.22  E-value=1.6e-07  Score=78.56  Aligned_cols=42  Identities=40%  Similarity=0.660  Sum_probs=0.0

Q ss_pred             CCCCCcEEEEeEcCCC-CCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRG-PVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG-~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .+++||+|+++++|+| ..|+.||.|.|||+|++.|  |++||+|
T Consensus         8 ~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~d--G~~fdss   50 (356)
T 3jxv_A            8 IGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLD--GKKFDSS   50 (356)
T ss_dssp             ---------------------------------------------
T ss_pred             ECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECC--CCEEEEc
Confidence            3678999999999999 6899999999999999988  9999986

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=98.13  E-value=2.5e-06  Score=71.32  Aligned_cols=43  Identities=21%  Similarity=0.312  Sum_probs=38.4

Q ss_pred             cCCCCCcEEEEeEcCCC-CCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           99 LPNSGGVKALDLRLGRG-PVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        99 l~~~sGL~~~iLk~GsG-~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      +..+.+++++++++|+| +.|+.||.|.|||+|++.|  |++||+|
T Consensus       240 v~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~d--G~~fd~~  283 (356)
T 3jxv_A          240 IGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQD--GTVFLKK  283 (356)
T ss_dssp             ESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESS--SCEEEEE
T ss_pred             cccccceeEEeeecccccCCCCCCCEEEEEEEEEECC--CCEEeec
Confidence            34567999999999999 7899999999999999988  9999874

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=97.75  E-value=3e-05  Score=63.43  Aligned_cols=39  Identities=26%  Similarity=0.343  Sum_probs=35.9

Q ss_pred             CCCCcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccC
Q 032320          101 NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDS  142 (143)
Q Consensus       101 ~~sGL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDS  142 (143)
                      .+.|++++++++|+|. .|+.||.|.|||+|++ +  |++||+
T Consensus       166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-d--G~~fd~  205 (280)
T 1q1c_A          166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-K--DKLFDQ  205 (280)
T ss_dssp             CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-T--TEEEEE
T ss_pred             cccceeEEeeecccccccccCCceEEEEEEEEe-C--CEEEec
Confidence            5689999999999998 6999999999999999 7  999986

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=97.40  E-value=0.00018  Score=60.43  Aligned_cols=39  Identities=38%  Similarity=0.617  Sum_probs=34.5

Q ss_pred             CCCCcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccC
Q 032320          101 NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDS  142 (143)
Q Consensus       101 ~~sGL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDS  142 (143)
                      .+.++...++++|.|. .|+.||+|.|||+|++ +  |++||+
T Consensus       144 ~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~--g~~f~~  183 (457)
T 1kt0_A          144 EDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-G--GRMFDC  183 (457)
T ss_dssp             SSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-T--TEEEEE
T ss_pred             CCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-C--CeEEec
Confidence            4568888999999884 7999999999999999 7  899986

>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1

Probab=97.30  E-value=0.00013  Score=52.39  Aligned_cols=27  Identities=19%  Similarity=0.294  Sum_probs=22.6

Q ss_pred             CCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          114 RGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       114 sG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ++..+++||.|.|||+|++ |  |++||+|
T Consensus        26 ~~~~~~~gD~V~v~Y~g~~-d--G~~fdss   52 (113)
T 1hxv_A           26 SDKKLANGDIAIIDFTGIV-D--NKKLASA   52 (113)
T ss_dssp             ---CCCSSEEEEEEEEEEE-T--TEECSTT
T ss_pred             CCCCCCCCCEEEEEEEEEE-C--CEEcccC
Confidence            3567999999999999999 7  9999986

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}

Probab=96.67  E-value=0.00084  Score=51.89  Aligned_cols=25  Identities=24%  Similarity=0.283  Sum_probs=23.1

Q ss_pred             CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          117 VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       117 ~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .+++||.|.|||+|++.|  |++||+|
T Consensus        24 ~i~~gd~V~v~Y~g~l~d--G~vfDss   48 (169)
T 4dt4_A           24 SVQSNSAVLVHFTLKLDD--GTTAEST   48 (169)
T ss_dssp             SCCTTCEEEEEEEEEETT--SCEEEEH
T ss_pred             cCCCCCEEEEEEEEEECC--CCEEEec
Confidence            689999999999999987  9999975

>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A

Probab=92.88  E-value=0.087  Score=44.84  Aligned_cols=26  Identities=23%  Similarity=0.566  Sum_probs=22.4

Q ss_pred             CCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          115 GPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       115 G~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ...++.||.|.+||+|++ |  |+.||++
T Consensus       158 ~~~~~~gD~V~i~y~g~~-d--G~~fd~~  183 (392)
T 1t11_A          158 DEAAENGKRVSIDFVGSI-D--GVEFEGG  183 (392)
T ss_dssp             SCCCCTTCEEEEEEEEES-S--SSCCTTC
T ss_pred             CCCCCCCCEEEEEEEEEE-C--CEEccCC
Confidence            346899999999999995 7  9999975

>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5

Probab=92.84  E-value=0.063  Score=46.18  Aligned_cols=26  Identities=23%  Similarity=0.401  Sum_probs=22.8

Q ss_pred             CCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          115 GPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       115 G~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      +..++.||.|.+||+|+. |  |+.||++
T Consensus       155 ~~~~~~gD~V~i~y~g~~-d--G~~fd~~  180 (432)
T 1w26_A          155 DGAVEAEDRVTIDFTGSV-D--GEEFEGG  180 (432)
T ss_dssp             SSCCCTTCEEEECEEEES-S--SCBCSSC
T ss_pred             CCCCCCCCEEEEEEEEee-C--CeEccCC
Confidence            457999999999999995 7  9999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	143
d1kt1a3	115	d.26.1.1 (A:139-253) FKBP51, N-terminal domains {M	5e-05
d1q1ca1	120	d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Hu	8e-05
d1r9ha_	118	d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabd	9e-05
d1yata_	113	d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeas	3e-04
d1q1ca2	117	d.26.1.1 (A:141-257) FKBP52, N-terminal domains {H	0.001
d1kt1a2	111	d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Mo	0.003

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 115

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 38.1 bits (88), Expect = 5e-05
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 98  ELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGW 138
           +L   GG+     R G G   P +G +V IH  GR   +   
Sbjct: 3   DLLEDGGIIRRTKRRGEGYSNPNEGARVQIHLEGRCGGRVFD 44

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 8e-05
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 103 GGVKALDLRLGRGP-VPVDGDQVAIHYYGRLA 133
            GV  +  R G G  +P+ GD+V +HY G L 
Sbjct: 11  EGVLKVIKREGTGTEMPMIGDRVFVHYTGWLL 42

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]} Length = 118

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 37.4 bits (86), Expect = 9e-05
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 103 GGVKALDLRLGRG-PVPVDGDQVAIHYYGRL 132
           GGV  L  + G+G   P  G  V +HY G L
Sbjct: 10  GGVLKLIKKEGQGVVKPTTGTTVKVHYVGTL 40

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 113

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.9 bits (82), Expect = 3e-04
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 94  AELLELPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDS 142
           +E++E    G VK   +  G G   P  GD V IHY G    + G +FDS
Sbjct: 1   SEVIE----GNVKIDRISPGDGATFPKTGDLVTIHYTGT--LENGQKFDS 44

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.001
 Identities = 9/39 (23%), Positives = 13/39 (33%), Gaps = 1/39 (2%)

Query: 103 GGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRF 140
           GG+       G G   P +G  V +   G    K   + 
Sbjct: 8   GGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQR 46

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 111

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 33.2 bits (75), Expect = 0.003
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 103 GGVKALDLRLGRGP-VPVDGDQVAIHYYGRLA 133
            GV  +  R+G G   P+ GD+V +HY G+LA
Sbjct: 4   RGVLKIVKRVGHGEETPMIGDRVYVHYNGKLA 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	143
d1u79a_	125	FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId:	99.11
d1q6ha_	210	Peptidyl-prolyl cis-trans isomerase FkpA {Escheric	99.01
d1fd9a_	204	Macrophage infectivity potentiator protein (MIP) {	98.98
d1yata_	113	Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyc	98.85
d1r9ha_	118	FKB-6, N-terminal domain {Caenorhabditis elegans [	98.83
d1q1ca1	120	FKBP52, N-terminal domains {Human (Homo sapiens) [	98.83
d2ppna1	107	FK-506 binding protein (FKBP12), an immunophilin {	98.79
d1jvwa_	160	Macrophage infectivity potentiator protein (MIP) {	98.79
d1pbka_	116	FKBP25 {Human (Homo sapiens) [TaxId: 9606]}	98.72
d1kt1a2	111	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	98.72
d1kt1a3	115	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	98.56
d1q1ca2	117	FKBP52, N-terminal domains {Human (Homo sapiens) [	98.21
d1t11a3	113	Trigger factor PPIase domain {Vibrio cholerae [Tax	88.31
d1l1pa_	106	Trigger factor PPIase domain {Escherichia coli [Ta	86.96

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.11  E-value=2.4e-11  Score=86.53  Aligned_cols=42  Identities=36%  Similarity=0.618  Sum_probs=39.6

Q ss_pred             CCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ++|+||+|+++++|+|+.|+.||+|.|||+|++.|  |++||+|
T Consensus         5 ~~psGl~y~~~~~G~G~~p~~gd~V~v~y~g~l~~--G~~fdss   46 (125)
T d1u79a_           5 VSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLEN--GKVFDSS   46 (125)
T ss_dssp             ECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTT--SCEEEEH
T ss_pred             ECCCCCEEEEEEeccCCCCCCCCEEEEEEEeeecC--CcEEecc
Confidence            56899999999999999999999999999999988  9999985

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

Probab=99.01  E-value=1.4e-10  Score=89.76  Aligned_cols=42  Identities=33%  Similarity=0.593  Sum_probs=39.9

Q ss_pred             CCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .+++||+|+++++|+|+.|+.||.|.|||+|+|.|  |++||+|
T Consensus       104 ~~~sGl~y~v~~~G~G~~p~~gd~v~v~y~g~l~d--G~~fd~s  145 (210)
T d1q6ha_         104 TSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLID--GKEFDNS  145 (210)
T ss_dssp             ECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETT--SCEEEEG
T ss_pred             EccCceEEEEeeCCCCCCCCCCceEEEEEEEEEcC--CCEEeec
Confidence            56899999999999999999999999999999998  9999985

>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Legionella pneumophila [TaxId: 446]

Probab=98.98  E-value=1.9e-10  Score=88.45  Aligned_cols=43  Identities=35%  Similarity=0.516  Sum_probs=40.1

Q ss_pred             cCCCCCcEEEEeEcCCCCCCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           99 LPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        99 l~~~sGL~~~iLk~GsG~~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ..+++||+|+++++|+|+.|+.||+|.|||+|+|.|  |++||+|
T Consensus        94 ~~~~sGl~y~v~~~G~G~~p~~~d~v~v~y~g~l~d--g~~f~~s  136 (204)
T d1fd9a_          94 VVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLID--GTVFDST  136 (204)
T ss_dssp             EECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETT--SCEEEEH
T ss_pred             EEecCccEEEEeecCCCcccCCCCEEEEEEEEEECC--CCEeccc
Confidence            346899999999999999999999999999999998  9999974

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.85  E-value=1.2e-09  Score=76.55  Aligned_cols=40  Identities=45%  Similarity=0.748  Sum_probs=36.9

Q ss_pred             CCCcEEEEeEcCCCCC-CCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          102 SGGVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       102 ~sGL~~~iLk~GsG~~-Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ++||+++++++|+|.. |+.||.|.|||+|++.|  |++||++
T Consensus         5 d~gl~~~~l~~G~G~~~P~~gd~V~v~y~~~~~d--G~~~ds~   45 (113)
T d1yata_           5 EGNVKIDRISPGDGATFPKTGDLVTIHYTGTLEN--GQKFDSS   45 (113)
T ss_dssp             GGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETT--SCEEEES
T ss_pred             cCCcEEEEEECccCCcCCCCCCEEEEEEEEEEec--CcEEecc
Confidence            5799999999999975 99999999999999988  9999875

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.83  E-value=1.8e-09  Score=76.68  Aligned_cols=42  Identities=40%  Similarity=0.701  Sum_probs=38.0

Q ss_pred             CCCCCcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ..++||+|+++++|+|. .|+.||.|.+||+|++.|  |++||+|
T Consensus         7 ~~d~Gl~~~il~~G~G~~~p~~gd~V~v~y~~~l~d--G~v~dss   49 (118)
T d1r9ha_           7 KKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLEN--GTKFDSS   49 (118)
T ss_dssp             TCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETT--SCEEEEH
T ss_pred             cCCCCEEEEEEECcCCCCCCCCCCEEEEEEEEEEcC--CCEEEEc
Confidence            35689999999999995 699999999999999988  9999974

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=2.3e-09  Score=76.48  Aligned_cols=42  Identities=40%  Similarity=0.658  Sum_probs=38.1

Q ss_pred             CCCCCcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          100 PNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       100 ~~~sGL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ..++||.++++++|+|. .|..||.|.|||+|++.|  |++||||
T Consensus         8 ~~d~gv~~~i~~~G~G~~~P~~gd~V~v~y~~~l~d--G~~fdss   50 (120)
T d1q1ca1           8 KQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLD--GTKFDSS   50 (120)
T ss_dssp             SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETT--SCEEEES
T ss_pred             CCCCCEEEEEEEcccCCcCCCCCCEEEEEEEEEEcC--CCEEEec
Confidence            34689999999999995 599999999999999988  9999985

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=2.2e-09  Score=74.69  Aligned_cols=38  Identities=37%  Similarity=0.694  Sum_probs=35.2

Q ss_pred             CcEEEEeEcCCCCC-CCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          104 GVKALDLRLGRGPV-PVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       104 GL~~~iLk~GsG~~-Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      ||+|+++++|+|.. |+.||.|.+||+|++.|  |++||+|
T Consensus         1 Gv~~~~l~~G~G~~~p~~gd~V~v~y~g~l~d--G~~~d~s   39 (107)
T d2ppna1           1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLED--GKKFDSS   39 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEETT--SCEEEEH
T ss_pred             CcEEEEEECcCCccCCCCCCEEEEEEEEEecC--CeEEEee
Confidence            78999999999975 89999999999999988  9999974

>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=98.79  E-value=1.5e-09  Score=81.02  Aligned_cols=43  Identities=33%  Similarity=0.544  Sum_probs=39.0

Q ss_pred             cCCCCCcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320           99 LPNSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus        99 l~~~sGL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      +.+++||+|+++++|+|. .|+.||+|.|||+|++.|  |++||++
T Consensus        30 ~~~~sGl~y~il~~G~G~~~P~~gd~V~v~Y~g~l~d--G~~fds~   73 (160)
T d1jvwa_          30 VKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRD--GTVFDSS   73 (160)
T ss_dssp             EECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTT--SCEEEEH
T ss_pred             EECCCCCEEEEEECcccccCCCCCcceEEEEEEEEcc--CCeeeee
Confidence            456899999999999997 599999999999999988  9999974

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=5.8e-09  Score=73.32  Aligned_cols=38  Identities=32%  Similarity=0.440  Sum_probs=34.4

Q ss_pred             CcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       104 GL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      .+.++++++|+|. .|+.||.|.|||+|+|.|  |++||+|
T Consensus         2 ~~~k~vl~~G~G~~~P~~gd~V~v~y~~~l~d--G~~fdss   40 (116)
T d1pbka_           2 KYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQD--GTVFDTN   40 (116)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEECTT--SCEEEEC
T ss_pred             cceEEEEecCCCCCCCCCCCEEEEEEEEEECC--CCEeecc
Confidence            4678999999995 699999999999999988  9999975

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=98.72  E-value=1.6e-09  Score=75.95  Aligned_cols=41  Identities=44%  Similarity=0.788  Sum_probs=27.5

Q ss_pred             CCCCcEEEEeEcCCCC-CCCCCCEEEEEEEEEEcCCCCCcccCC
Q 032320          101 NSGGVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST  143 (143)
Q Consensus       101 ~~sGL~~~iLk~GsG~-~Pk~GDtV~VhYtG~L~d~~GkvFDSS  143 (143)
                      +++||.++++++|+|. .|+.||.|.|||+|++.|  |++||||
T Consensus         2 ~d~Gi~~~i~~~G~g~~~P~~gd~V~v~y~~~l~d--G~~~dss   43 (111)
T d1kt1a2           2 KDRGVLKIVKRVGHGEETPMIGDRVYVHYNGKLAN--GKKFDSS   43 (111)
T ss_dssp             CSCSCEEEC----CCSCCCCTTCEEEEECCCCSCC---------
T ss_pred             CCCCeEEEEEEcccCCcCCCCCCEEEEEEEEEECC--CCEEEEE
Confidence            4689999999999996 699999999999999988  9999985

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=98.56  E-value=3.2e-08  Score=68.64  Aligned_cols=42  Identities=38%  Similarity=0.642  Sum_probs=37.0

Q ss_pred             ccCCCCCcEEEEeEcCCC-CCCCCCCEEEEEEEEEEcCCCCCcccC
Q 032320           98 ELPNSGGVKALDLRLGRG-PVPVDGDQVAIHYYGRLAAKQGWRFDS  142 (143)
Q Consensus        98 ~l~~~sGL~~~iLk~GsG-~~Pk~GDtV~VhYtG~L~d~~GkvFDS  142 (143)
                      ++..++||.++++++|+| ..|+.||+|.|||+|++ +  |++||+
T Consensus         3 ~~~~D~gi~k~il~~G~G~~~p~~gd~V~v~y~g~~-~--g~~~~~   45 (115)
T d1kt1a3           3 DLLEDGGIIRRTKRRGEGYSNPNEGARVQIHLEGRC-G--GRVFDC   45 (115)
T ss_dssp             ETTSSSSEEEEEEECCCCSSCCCTTCEEEEEEEEEE-T--TEEEEE
T ss_pred             ccccCCCEEEEEEEeecCCCCCCCCCEEEEEEEEEe-C--Cccccc
Confidence            456789999999999999 58999999999999998 5  677875

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=7.4e-07  Score=61.80  Aligned_cols=39  Identities=26%  Similarity=0.389  Sum_probs=33.4

Q ss_pred             CCCCcEEEEeEcCCC-CCCCCCCEEEEEEEEEEcCCCCCcccC
Q 032320          101 NSGGVKALDLRLGRG-PVPVDGDQVAIHYYGRLAAKQGWRFDS  142 (143)
Q Consensus       101 ~~sGL~~~iLk~GsG-~~Pk~GDtV~VhYtG~L~d~~GkvFDS  142 (143)
                      .++||.++++++|+| ..|..||.|.|||+|++.+  | .||.
T Consensus         6 ~D~gi~~~il~~G~G~~~p~~gd~V~v~y~g~~~~--~-~~~~   45 (117)
T d1q1ca2           6 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD--K-LFDQ   45 (117)
T ss_dssp             CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEETT--E-EEEE
T ss_pred             CCCCEEEEEEeeecCCCCCCCCCEEEEEEEEEeCC--C-cEee
Confidence            358999999999999 5799999999999999966  5 4553

>d1t11a3 d.26.1.1 (A:135-247) Trigger factor PPIase domain {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Vibrio cholerae [TaxId: 666]

Probab=88.31  E-value=0.21  Score=33.63  Aligned_cols=23  Identities=26%  Similarity=0.661  Sum_probs=19.3

Q ss_pred             CCCCCCEEEEEEEEEEcCCCCCcccC
Q 032320          117 VPVDGDQVAIHYYGRLAAKQGWRFDS  142 (143)
Q Consensus       117 ~Pk~GDtV~VhYtG~L~d~~GkvFDS  142 (143)
                      .++.||.|.|+|.|++ |  |+.|+.
T Consensus        23 ~a~~gD~v~id~~~~~-d--G~~~~~   45 (113)
T d1t11a3          23 AAENGKRVSIDFVGSI-D--GVEFEG   45 (113)
T ss_dssp             CCCTTCEEEEEEEEES-S--SSCCTT
T ss_pred             cccCCCEEEEEEEEEE-C--CEEccC
Confidence            5889999999999998 6  777754

>d1l1pa_ d.26.1.1 (A:) Trigger factor PPIase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Escherichia coli [TaxId: 562]

Probab=86.96  E-value=0.13  Score=34.55  Aligned_cols=24  Identities=25%  Similarity=0.448  Sum_probs=19.8

Q ss_pred             CCCCCCCEEEEEEEEEEcCCCCCcccC
Q 032320          116 PVPVDGDQVAIHYYGRLAAKQGWRFDS  142 (143)
Q Consensus       116 ~~Pk~GDtV~VhYtG~L~d~~GkvFDS  142 (143)
                      +.++.||.|.|+|+|++ |  |+.|+.
T Consensus        13 r~a~~GD~v~id~~~~~-d--G~~~~~   36 (106)
T d1l1pa_          13 GAVEAEDRVTIDFTGSV-D--GEEFEG   36 (106)
T ss_dssp             SSCCTTEEEEEEEECCS-S--SSCCST
T ss_pred             ccccCCCEEEEEEEEEE-C--CEECCC
Confidence            56789999999999987 6  777754