Citrus Sinensis ID: 032417

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-
Protein Sequence
MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSSGVDDATAAIPWILENEPL
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHccccccccccccHHHHHHHHHHHHccccEEEEccccccEEEEEEEccccEEccccccccccccccccccccccEEccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccccEEcHHHHHHHHHHHHccccEEEEcccccccEEEEEEccccEEEccccccccccccccccccccEEEccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mhwqwekhgtcsfpvvrdeySYFSTTLNLYFKYNVTRVLneagylpsntekyplggIVSAIQNAfhatpkldcskDAVNELHLcfykdfkprdciierspendnyfsssscpkyvslpvymssgvddataaipwilenepl
Flexible Loop (DISEMBL)
mhwqwekhgtcsfpvvRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIErspendnyfsssSCPKYVSLPVYMSSGVDDATAAIPWILENEPL
Low Complexity Region (SEG)
MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSSGVDDATAAIPWILENEPL
Disordered region (IsUnstruct)
**WQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERS***DNYFSSSSCPKYVSLPVYMSSGVDDATAAIPWIL*****
Disordered Region (DISOPRED)
MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERS***********CP**VSL*****************ILENEPL
Disordered Region (DISEMBL)
MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSSGVDDATAAIPWILENEPL
Disordered Region (DISPRO)
*H****KHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSSG*******IP********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSSGVDDATAAIPWILENEPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	141	2.2.26 [Sep-21-2011]
P42814	259	Ribonuclease 2 OS=Arabido	yes	no	0.794	0.432	0.649	6e-40
Q7M456	213	Ribonuclease Oy OS=Crasso	N/A	no	0.730	0.483	0.302	1e-10
O80322	228	Ribonuclease S-1 OS=Pyrus	N/A	no	0.609	0.377	0.347	5e-09
P42813	230	Ribonuclease 1 OS=Arabido	no	no	0.553	0.339	0.387	3e-08
O80325	226	Ribonuclease S-7 OS=Pyrus	N/A	no	0.546	0.340	0.378	1e-07
Q7M438	223	Ribonuclease DdI OS=Dicty	no	no	0.645	0.408	0.311	2e-07
P80196	237	Intracellular ribonucleas	N/A	no	0.546	0.324	0.35	3e-07
B8XY56	240	Ribonuclease T2 OS=Danio	yes	no	0.858	0.504	0.280	4e-07
Q40966	228	Ribonuclease S-4 OS=Pyrus	N/A	no	0.758	0.469	0.308	5e-07
Q9CQ01	259	Ribonuclease T2 OS=Mus mu	yes	no	0.638	0.347	0.326	1e-06

>sp|P42814|RNS2_ARATH Ribonuclease 2 OS=Arabidopsis thaliana GN=RNS2 PE=2 SV=1

 Score =  162 bits (410), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 76/117 (64%), Positives = 93/117 (79%), Gaps = 5/117 (4%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTCS PV  DEY+YF TTLNLY K+NVT VL +AGY+ SN+EKYPLGGIV+AIQN
Sbjct: 129 EWEKHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQN 188

Query: 64  AFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVY 120
           AFH TP++ C +DA++E+ +CFYKDFKPRDC+      + +  S  SCPKYVSLP Y
Sbjct: 189 AFHITPEVVCKRDAIDEIRICFYKDFKPRDCV-----GSQDLTSRKSCPKYVSLPEY 240

May remobilize phosphate, particularly when cells senesce or when phosphate becomes limiting.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 2EC: 7EC: .EC: 1

>sp|Q7M456|RNOY_CRAGI Ribonuclease Oy OS=Crassostrea gigas PE=1 SV=1

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 16/119 (13%)

Query: 4   QWEKHGTC--SFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
           +W KHGTC  S P   +E  YF   L L+ KYN++R+L   G LPS T  Y +    +A+
Sbjct: 89  EWSKHGTCATSLPATSNELKYFGMGLKLHAKYNISRILVNQGILPSKTAGYMINETEAAV 148

Query: 62  QNAFHATPKLDC-------SKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPK 113
           +        ++C        K  + E+ +C  K+F+   C       N    S ++CP+
Sbjct: 149 KRELGVDAVIECVYDKEKTKKQLLYEISICLTKEFELISC-------NKKEVSETTCPR 200

Releases mononucleotides from RNA in the order of 3'-GMP, 3'-AMP and 3'-UMP.

Crassostrea gigas (taxid: 29159)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: -

>sp|O80322|RNS1_PYRPY Ribonuclease S-1 OS=Pyrus pyrifolia PE=1 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 9/95 (9%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYF--KYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
           +W KHGTC +P ++D+  Y  T + +Y   K NV+ +L++A   P+ T + PL  I +AI
Sbjct: 112 EWIKHGTCGYPTIKDDMHYLQTVIRMYITQKQNVSAILSKAAIQPNGTNR-PLVDIENAI 170

Query: 62  QNAFHAT-PKLDCSKDA-----VNELHLCFYKDFK 90
           +   + T PK  C K+      + E+ LC  +D K
Sbjct: 171 RRGTNNTKPKFKCQKNTRTTTELVEVTLCSDRDLK 205

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species, self-incompatibility is controlled by the single, multiallelic locus S.

Pyrus pyrifolia (taxid: 3767)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|P42813|RNS1_ARATH Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 2/80 (2%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTCS  V+ D++ YF T LNL  K N+   L +AG  P + + Y L  I  +I+ 
Sbjct: 119 EWEKHGTCSESVI-DQHEYFQTALNLKQKTNLLGALTKAGINP-DGKSYSLESIRDSIKE 176

Query: 64  AFHATPKLDCSKDAVNELHL 83
           +   TP ++C++D      L
Sbjct: 177 SIGFTPWVECNRDGSGNSQL 196

May remobilize phosphate, particularly when cells senesce or when phosphate becomes limiting.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|O80325|RNS7_PYRPY Ribonuclease S-7 OS=Pyrus pyrifolia PE=1 SV=1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 5/82 (6%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYF--KYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
           QW KHG+C +P + ++  YF T +N+Y   K NV+ +L++A   P   ++ PL  I +AI
Sbjct: 112 QWIKHGSCGYPAIMNDTHYFQTVINMYITQKQNVSEILSKAKIEPLGIQR-PLVHIENAI 170

Query: 62  QNAF-HATPKLDCSKDA-VNEL 81
           +N+  +  PK  C K++ V EL
Sbjct: 171 RNSTNNKKPKFKCQKNSGVTEL 192

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species, self-incompatibility is controlled by the single, multiallelic locus S.

Pyrus pyrifolia (taxid: 3767)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|Q7M438|RNDI_DICDI Ribonuclease DdI OS=Dictyostelium discoideum GN=ddiA PE=1 SV=3

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 4   QWEKHGTCSFPV-VRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQ 62
           ++ KHGTCS    + D + YF+T + LY ++N+T  L      PS++  Y    I +AI 
Sbjct: 113 EFSKHGTCSITGPITDIHDYFATGIKLYTEFNITAALESENIYPSDSNTYKPVDITNAIT 172

Query: 63  NAFHATPKLDCSKDAVNELHLCFYKD-FKPRDC 94
             F   P + CS   ++ + +C  K+     DC
Sbjct: 173 THFGGKPGIQCSSGQLSTVAVCIDKNSLSIMDC 205

Releases mononucleotides from RNA in the order of 3'-GMP > 3'-UMP > 3'-AMP > 3'-CMP.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|P80196|RNLX_SOLLC Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +W KHGTCS     ++++YF T L+   K N+ + LN AG  P N + Y +  I  AI+ 
Sbjct: 117 EWLKHGTCS---ALNQHAYFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAIEK 173

Query: 64  AFHATPKLDCSKDAVNELHL 83
               TP ++C+ D+     L
Sbjct: 174 GVGHTPFIECNVDSQGNHQL 193

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|B8XY56|RNT2_DANRE Ribonuclease T2 OS=Danio rerio GN=rnaset2 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 18/139 (12%)

Query: 4   QWEKHGTCSFPV--VRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
           +W KHGTC+     +  E+ YF   L LY K+++  VL +   +PS  + Y L  +  AI
Sbjct: 103 EWTKHGTCAAKSESLNSEHKYFGKALELYHKFDLNSVLLKNQIVPSE-KHYTLEDVEEAI 161

Query: 62  QNAFHATPKLDC-------SKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKY 114
            +A+   PK+ C           + ++ +C  +DF+   C  E+S E+     S+  P  
Sbjct: 162 TSAYGVKPKIQCVHPGQGGQVQILGQIEICVDRDFQLMGC--EKSSEDT---WSNDLP-- 214

Query: 115 VSLPVYMSSGVDDATAAIP 133
            ++PV   SG+     ++P
Sbjct: 215 -TVPVSGQSGLSVCDHSMP 232

Has ribonuclease activity, with higher activity at acidic pH. Probably is involved in lysosomal degradation of ribosomal RNA.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: -

>sp|Q40966|RNS4_PYRPY Ribonuclease S-4 OS=Pyrus pyrifolia PE=1 SV=2

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 13/120 (10%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYF--KYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
           +W KHGTC +P ++D+  Y  T + +Y   K NV+ +L++A   P N     L  I +AI
Sbjct: 112 EWLKHGTCGYPTIKDDMHYLKTVIKMYITQKQNVSAILSKATIQP-NGNNRSLVDIENAI 170

Query: 62  QNAFHAT-PKLDCSKDA-----VNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYV 115
           ++  + T PK  C K+      + E+ LC  +D           P+   YF    CP  V
Sbjct: 171 RSGNNNTKPKFKCQKNTRTTTELVEVTLCSNRDLTKFINCPHGPPKGSRYF----CPANV 226

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species, self-incompatibility is controlled by the single, multiallelic locus S.

Pyrus pyrifolia (taxid: 3767)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|Q9CQ01|RNT2_MOUSE Ribonuclease T2 OS=Mus musculus GN=Rnaset2 PE=2 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 11/101 (10%)

Query: 4   QWEKHGTCSFPV--VRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
           +W KHGTC+  V  +  E  YF  +L+LY + ++  VL + G  PS    Y L     A+
Sbjct: 118 EWVKHGTCAAQVDALNSEKKYFGKSLDLYKQIDLNSVLQKFGIKPS-INYYQLADFKDAL 176

Query: 62  QNAFHATPKLDC-------SKDAVNELHLCFYK-DFKPRDC 94
              +   PK+ C       S   V ++ LCF K D   R+C
Sbjct: 177 TRIYGVVPKIQCLMPEQGESVQTVGQIELCFTKEDLHLRNC 217

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	141
237770540	278	S-like RNase [Citrus maxima]	0.978	0.496	0.978	3e-74
281376745	278	S-like RNase [Citrus reticulata]	0.978	0.496	0.978	3e-73
261854600	278	S-like RNase [Citrus maxima]	0.964	0.489	0.985	5e-73
281376747	278	S-like RNase [Citrus reticulata]	0.964	0.489	0.977	4e-72
118481465	268	unknown [Populus trichocarpa]	0.936	0.492	0.735	1e-52
224131990	268	predicted protein [Populus trichocarpa]	0.936	0.492	0.727	6e-52
255567200	259	ribonuclease t2, putative [Ricinus commu	0.900	0.490	0.757	1e-50
449462427	275	PREDICTED: ribonuclease 2-like [Cucumis	0.822	0.421	0.752	1e-44
449502068	275	PREDICTED: LOW QUALITY PROTEIN: ribonucl	0.822	0.421	0.752	1e-44
356560551	271	PREDICTED: ribonuclease 2-like [Glycine	0.858	0.446	0.661	3e-42

>gi|237770540|gb|ACR19180.1| S-like RNase [Citrus maxima]

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 135/138 (97%), Positives = 137/138 (99%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN
Sbjct: 141 EWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 200

Query: 64  AFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSS 123
           AFHATPKLDCSK AVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPK+VSLPVYMSS
Sbjct: 201 AFHATPKLDCSKGAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKFVSLPVYMSS 260

Query: 124 GVDDATAAIPWILENEPL 141
           GVDDATAAIPWILENEPL
Sbjct: 261 GVDDATAAIPWILENEPL 278

Source: Citrus maxima

Species: Citrus maxima

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|281376745|gb|ADA67882.1| S-like RNase [Citrus reticulata]

 Score =  279 bits (714), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 135/138 (97%), Positives = 136/138 (98%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN
Sbjct: 141 EWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 200

Query: 64  AFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSS 123
           AFHATPKLDCSKDAVNELHLCFYKDFKPRD IIERSPENDNYFSSSSCPKYVSLPVY SS
Sbjct: 201 AFHATPKLDCSKDAVNELHLCFYKDFKPRDYIIERSPENDNYFSSSSCPKYVSLPVYTSS 260

Query: 124 GVDDATAAIPWILENEPL 141
           GVDDATAAIPWILENEPL
Sbjct: 261 GVDDATAAIPWILENEPL 278

Source: Citrus reticulata

Species: Citrus reticulata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|261854600|gb|ACY00699.1| S-like RNase [Citrus maxima]

 Score =  278 bits (711), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 134/136 (98%), Positives = 135/136 (99%)

Query: 6   EKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF 65
           EKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF
Sbjct: 143 EKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF 202

Query: 66  HATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSSGV 125
           HATPKLDCSKDAVNEL LCFYKDFKPRDCIIERSPENDNYFSSSSCPK+VSLPVYMSSGV
Sbjct: 203 HATPKLDCSKDAVNELRLCFYKDFKPRDCIIERSPENDNYFSSSSCPKFVSLPVYMSSGV 262

Query: 126 DDATAAIPWILENEPL 141
           DDATAAIPWILENEPL
Sbjct: 263 DDATAAIPWILENEPL 278

Source: Citrus maxima

Species: Citrus maxima

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|281376747|gb|ADA67883.1| S-like RNase [Citrus reticulata]

 Score =  275 bits (703), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 133/136 (97%), Positives = 133/136 (97%)

Query: 6   EKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF 65
           EKHGTCSFPV RDEYSYF TTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF
Sbjct: 143 EKHGTCSFPVFRDEYSYFLTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF 202

Query: 66  HATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSSGV 125
           HATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVY SSGV
Sbjct: 203 HATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYTSSGV 262

Query: 126 DDATAAIPWILENEPL 141
           DDATAAIPWILENEPL
Sbjct: 263 DDATAAIPWILENEPL 278

Source: Citrus reticulata

Species: Citrus reticulata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481465|gb|ABK92675.1| unknown [Populus trichocarpa]

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 100/136 (73%), Positives = 115/136 (84%), Gaps = 4/136 (2%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTCS PVV DEYSYFSTTLN+YFKYNVT+VLNEAGY+PSN+EKYPLGGIVSAI+N
Sbjct: 132 EWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPSNSEKYPLGGIVSAIEN 191

Query: 64  AFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSS 123
           AFHATP+L CSK  + EL LCFYKDFKPRDC+I    +ND Y S SSCPKYVSLP Y+S 
Sbjct: 192 AFHATPQLVCSKGDLEELRLCFYKDFKPRDCVI----QNDMYTSKSSCPKYVSLPAYVSL 247

Query: 124 GVDDATAAIPWILENE 139
           G+D A   +PW+ +NE
Sbjct: 248 GLDGAGTEVPWVPDNE 263

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131990|ref|XP_002321228.1| predicted protein [Populus trichocarpa] gi|222862001|gb|EEE99543.1| predicted protein [Populus trichocarpa]

 Score =  208 bits (529), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 99/136 (72%), Positives = 114/136 (83%), Gaps = 4/136 (2%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTCS PVV DEYSYFSTTLN+YFKYNVT+VLNEAGY+PSN+EKYPLGGIVSAI+N
Sbjct: 132 EWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPSNSEKYPLGGIVSAIEN 191

Query: 64  AFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSS 123
           AFHATP+L CSK  + EL LCFYKDFKPRDC+I    +ND Y S SSCPKYVSLP Y+S 
Sbjct: 192 AFHATPQLVCSKGDLEELRLCFYKDFKPRDCVI----QNDMYTSKSSCPKYVSLPAYVSL 247

Query: 124 GVDDATAAIPWILENE 139
           G+D A   + W+ +NE
Sbjct: 248 GLDGAGTEVSWVPDNE 263

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567200|ref|XP_002524581.1| ribonuclease t2, putative [Ricinus communis] gi|223536134|gb|EEF37789.1| ribonuclease t2, putative [Ricinus communis]

 Score =  204 bits (518), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 97/128 (75%), Positives = 111/128 (86%), Gaps = 1/128 (0%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTCSFPVV DEYSYF TTLN+YFKYNVT+VLNEAGY+PSNTEKYPLGGI+SAI+N
Sbjct: 131 EWEKHGTCSFPVVHDEYSYFLTTLNVYFKYNVTKVLNEAGYVPSNTEKYPLGGIISAIEN 190

Query: 64  AFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSS 123
           AFHATP L CS+ AV EL+LCFYKDFKPR+C +  S   DN+ S SSCPK+VSLP Y+SS
Sbjct: 191 AFHATPSLSCSRGAVEELYLCFYKDFKPRNCAV-GSIIQDNFSSKSSCPKFVSLPAYVSS 249

Query: 124 GVDDATAA 131
           G+D A AA
Sbjct: 250 GLDGAEAA 257

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462427|ref|XP_004148942.1| PREDICTED: ribonuclease 2-like [Cucumis sativus]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/117 (75%), Positives = 97/117 (82%), Gaps = 1/117 (0%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTCS+PV  DEY+YF TTLN+YFKYNVT+VLN+AGYLPSNTEKYPLGGI+SAIQN
Sbjct: 141 EWEKHGTCSYPVAHDEYNYFLTTLNVYFKYNVTKVLNDAGYLPSNTEKYPLGGIISAIQN 200

Query: 64  AFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVY 120
           AFHATP   C K AV EL+LCFYKDFKPRDC  E   +N    S SSCPKYVSLP Y
Sbjct: 201 AFHATPSFGCKKGAVEELYLCFYKDFKPRDC-AESHSQNGIISSRSSCPKYVSLPAY 256

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449502068|ref|XP_004161534.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease 2-like [Cucumis sativus]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/117 (75%), Positives = 97/117 (82%), Gaps = 1/117 (0%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTCS+PV  DEY+YF TTLN+YFKYNVT+VLN+AGYLPSNTEKYPLGGI+SAIQN
Sbjct: 141 EWEKHGTCSYPVAHDEYNYFLTTLNVYFKYNVTKVLNDAGYLPSNTEKYPLGGIISAIQN 200

Query: 64  AFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVY 120
           AFHATP   C K AV EL+LCFYKDFKPRDC  E   +N    S SSCPKYVSLP Y
Sbjct: 201 AFHATPSFGCKKGAVEELYLCFYKDFKPRDC-AESHSQNGIISSRSSCPKYVSLPAY 256

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560551|ref|XP_003548554.1| PREDICTED: ribonuclease 2-like [Glycine max]

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 80/121 (66%), Positives = 100/121 (82%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTCS+PV R+EY YF T LN+YFKYN+T VLN+AGY+PSNTEKYPLGGI+SAI+N
Sbjct: 137 EWEKHGTCSYPVFRNEYDYFLTVLNVYFKYNITSVLNDAGYVPSNTEKYPLGGIISAIEN 196

Query: 64  AFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSS 123
           AFHA+P++ CSKD++ EL+LCFYK+F+PRDC +    + D   S  SCPKYVSLP  +S 
Sbjct: 197 AFHASPQIVCSKDSIEELYLCFYKNFQPRDCALGSDIKIDMVTSKKSCPKYVSLPESVSV 256

Query: 124 G 124
           G
Sbjct: 257 G 257

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	141
TAIR|locus:2063964	259	RNS2 "ribonuclease 2" [Arabido	0.929	0.505	0.579	8.7e-40
UNIPROTKB|E1C5F2	266	RNASET2 "Uncharacterized prote	0.872	0.462	0.297	3.5e-11
UNIPROTKB|F1P285	201	RNASET2 "Uncharacterized prote	0.638	0.447	0.33	1.2e-10
TAIR|locus:2056755	230	RNS1 "ribonuclease 1" [Arabido	0.503	0.308	0.410	3.2e-10
DICTYBASE|DDB_G0295845	236	DDB_G0295845 "ribonuclease T2"	0.780	0.466	0.298	4.9e-10
ZFIN|ZDB-GENE-030131-2513	240	rnaset2 "ribonuclease T2" [Dan	0.872	0.512	0.283	9.3e-10
TAIR|locus:2035871	228	AT1G14220 [Arabidopsis thalian	0.560	0.346	0.348	1.2e-09
DICTYBASE|DDB_G0281293	223	ddiA "ribonuclease T2" [Dictyo	0.645	0.408	0.311	1.8e-09
UNIPROTKB|Q7M329	200	RNASET2 "Ribonuclease T2" [Sus	0.638	0.45	0.3	3.3e-08
UNIPROTKB|Q0III8	291	RNASET2 "Uncharacterized prote	0.645	0.312	0.29	3.3e-08

TAIR|locus:2063964 RNS2 "ribonuclease 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 80/138 (57%), Positives = 100/138 (72%)

Query:     4 QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
             +WEKHGTCS PV  DEY+YF TTLNLY K+NVT VL +AGY+ SN+EKYPLGGIV+AIQN
Sbjct:   129 EWEKHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQN 188

Query:    64 AFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSS 123
             AFH TP++ C +DA++E+ +CFYKDFKPRDC+      + +  S  SCPKYVSLP Y  +
Sbjct:   189 AFHITPEVVCKRDAIDEIRICFYKDFKPRDCV-----GSQDLTSRKSCPKYVSLPEY--T 241

Query:   124 GVDDATAAIPWILENEPL 141
              +D     +    E E L
Sbjct:   242 PLDGEAMVLKMPTEREAL 259

GO:0003723 "RNA binding" evidence=IEA

GO:0004521 "endoribonuclease activity" evidence=ISS;IDA

GO:0005576 "extracellular region" evidence=ISM

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010168 "ER body" evidence=IDA

GO:0010507 "negative regulation of autophagy" evidence=IMP

GO:0016075 "rRNA catabolic process" evidence=IMP

GO:0007568 "aging" evidence=TAS

GO:0005622 "intracellular" evidence=IDA

UNIPROTKB|E1C5F2 RNASET2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 156 (60.0 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 41/138 (29%), Positives = 67/138 (48%)

Query:     4 QWEKHGTCS--FPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
             +WEKHGTC+   P++  +  YFS TL LY   N+   L +AG  P +T  Y +  I   +
Sbjct:   117 EWEKHGTCAATLPILDSQKKYFSKTLELYQLVNLNGFLLKAGIKPGSTY-YQMAAIKEVL 175

Query:    62 QNAFHATPKLDC-----SKDA--VNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKY 114
                +  TPK+ C      ++A  + ++  CF K+ + R+C   +   +  + +     + 
Sbjct:   176 TEFYGITPKIQCLPPEEGEEAQTLGQIEFCFTKELELRNCTEPKGESSRMHTNLQRVTEE 235

Query:   115 VS-----LPVYMSSGVDD 127
             +S     LPVY  S V D
Sbjct:   236 LSVCNDTLPVYYPSQVKD 253

GO:0003723 "RNA binding" evidence=IEA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

UNIPROTKB|F1P285 RNASET2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 33/100 (33%), Positives = 53/100 (53%)

Query:     4 QWEKHGTCS--FPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
             +WEKHGTC+   P++  +  YFS TL LY   N+   L +AG  P +T  Y +  I   +
Sbjct:    81 EWEKHGTCAATLPILDSQKKYFSKTLELYQLVNLNGFLLKAGIKPGSTY-YQMAAIKEVL 139

Query:    62 QNAFHATPKLDC-----SKDA--VNELHLCFYKDFKPRDC 94
                +  TPK+ C      ++A  + ++  CF K+ + R+C
Sbjct:   140 TEFYGITPKIQCLPPEEGEEAQTLGQIEFCFTKELELRNC 179

GO:0003723 "RNA binding" evidence=IEA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

TAIR|locus:2056755 RNS1 "ribonuclease 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query:     4 QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
             +WEKHGTCS  V+ D++ YF T LNL  K N+   L +AG  P   + Y L  I  +I+ 
Sbjct:   119 EWEKHGTCSESVI-DQHEYFQTALNLKQKTNLLGALTKAGINPDG-KSYSLESIRDSIKE 176

Query:    64 AFHATPKLDCSKD 76
             +   TP ++C++D
Sbjct:   177 SIGFTPWVECNRD 189

GO:0003723 "RNA binding" evidence=IEA

GO:0004521 "endoribonuclease activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=IEP

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0004540 "ribonuclease activity" evidence=IDA

GO:0007568 "aging" evidence=IEP

GO:0016036 "cellular response to phosphate starvation" evidence=IEP

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=IMP

DICTYBASE|DDB_G0295845 DDB_G0295845 "ribonuclease T2" [Dictyostelium discoideum (taxid:44689)]

 Score = 144 (55.7 bits), Expect = 4.9e-10, P = 4.9e-10
 Identities = 37/124 (29%), Positives = 59/124 (47%)

Query:     1 MHW--QWEKHGTCSFPV---VRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLG 55
             + W  +++KHGTC+      + +E+ YF   L LY ++N+T  L      PS+ + Y   
Sbjct:   115 LFWTSEYKKHGTCAVVAGSPISNEHDYFVAGLKLYTQHNLTSALISENIYPSDQDTYESD 174

Query:    56 GIVSAIQNAFHATPKLDCSKDAVNELHLCF-YKDFKPRDCIIERSPENDNYFSSSSCPKY 114
              I SAI + F   P + C  + ++ + LC   K     DC     PE D +    +C   
Sbjct:   175 SISSAINSQFGGQPVMQCDNNKLSTIALCIDKKTLSIMDC-----PEVDGF---DTCSGK 226

Query:   115 VSLP 118
             VS+P
Sbjct:   227 VSIP 230

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-030131-2513 rnaset2 "ribonuclease T2" [Danio rerio (taxid:7955)]

 Score = 142 (55.0 bits), Expect = 9.3e-10, P = 9.3e-10
 Identities = 40/141 (28%), Positives = 70/141 (49%)

Query:     2 HWQWEKHGTCSFPV--VRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVS 59
             +++W KHGTC+     +  E+ YF   L LY K+++  VL +   +PS  + Y L  +  
Sbjct:   101 NYEWTKHGTCAAKSESLNSEHKYFGKALELYHKFDLNSVLLKNQIVPSE-KHYTLEDVEE 159

Query:    60 AIQNAFHATPKLDC-------SKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCP 112
             AI +A+   PK+ C           + ++ +C  +DF+   C  E+S E D +  S+  P
Sbjct:   160 AITSAYGVKPKIQCVHPGQGGQVQILGQIEICVDRDFQLMGC--EKSSE-DTW--SNDLP 214

Query:   113 KYVSLPVYMSSGVDDATAAIP 133
                ++PV   SG+     ++P
Sbjct:   215 ---TVPVSGQSGLSVCDHSMP 232

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0016075 "rRNA catabolic process" evidence=IMP

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0004518 "nuclease activity" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0004519 "endonuclease activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0043202 "lysosomal lumen" evidence=IEA

GO:0005788 "endoplasmic reticulum lumen" evidence=IEA

TAIR|locus:2035871 AT1G14220 [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 30/86 (34%), Positives = 51/86 (59%)

Query:     4 QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
             +WEKHGTCS  V+ D++ YF   L L  K N+ ++L  +G  P +   Y L  I +AI++
Sbjct:   117 EWEKHGTCSESVM-DQHEYFENALKLKQKANLLQILKNSGINPDDGF-YNLDKITNAIKD 174

Query:    64 AFHATPKLDCSKDA-----VNELHLC 84
                 TP ++C+KD      ++++++C
Sbjct:   175 GIGFTPGIECNKDPERNAQLHQIYIC 200

GO:0003723 "RNA binding" evidence=IEA

GO:0004521 "endoribonuclease activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0033897 "ribonuclease T2 activity" evidence=IEA

DICTYBASE|DDB_G0281293 ddiA "ribonuclease T2" [Dictyostelium discoideum (taxid:44689)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/93 (31%), Positives = 47/93 (50%)

Query:     4 QWEKHGTCSFP-VVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQ 62
             ++ KHGTCS    + D + YF+T + LY ++N+T  L      PS++  Y    I +AI 
Sbjct:   113 EFSKHGTCSITGPITDIHDYFATGIKLYTEFNITAALESENIYPSDSNTYKPVDITNAIT 172

Query:    63 NAFHATPKLDCSKDAVNELHLCFYKD-FKPRDC 94
               F   P + CS   ++ + +C  K+     DC
Sbjct:   173 THFGGKPGIQCSSGQLSTVAVCIDKNSLSIMDC 205

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0090305 "nucleic acid phosphodiester bond hydrolysis" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0004519 "endonuclease activity" evidence=IEA

GO:0004518 "nuclease activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|Q7M329 RNASET2 "Ribonuclease T2" [Sus scrofa (taxid:9823)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 30/100 (30%), Positives = 48/100 (48%)

Query:     4 QWEKHGTCS--FPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
             +WEKHGTC+     +  +  YF  TL+LY +  +   L + G  PS    Y +  I  A+
Sbjct:    82 EWEKHGTCAAQLDALNSQRKYFGKTLDLYKELALNSTLQKLGIKPS-ISYYQISDIKHAL 140

Query:    62 QNAFHATPKLDC----SKDAVN---ELHLCFYKDFKPRDC 94
                +   PK+ C    S + V    ++ LC  +D + +DC
Sbjct:   141 VGVYGVVPKVQCLPPKSGEKVQTLGQIELCLTRDLQLQDC 180

GO:0005788 "endoplasmic reticulum lumen" evidence=ISS

GO:0005764 "lysosome" evidence=ISS

GO:0005615 "extracellular space" evidence=ISS

GO:0004540 "ribonuclease activity" evidence=ISS

GO:0006401 "RNA catabolic process" evidence=ISS

GO:0043202 "lysosomal lumen" evidence=IEA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|Q0III8 RNASET2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 131 (51.2 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 29/100 (29%), Positives = 49/100 (49%)

Query:     4 QWEKHGTCS--FPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
             +W+KHGTC+     +  +  YF  +L+LY    +T +L + G  PS    Y +  I  A+
Sbjct:   155 EWKKHGTCAAQLDALNSQRKYFGKSLDLYKALALTSMLQKLGIEPSTDHYYQVSDIRDAL 214

Query:    62 QNAFHATPKLDC---SK----DAVNELHLCFYKDFKPRDC 94
                +   PK+ C    K      + ++ LCF KD + ++C
Sbjct:   215 VTVYKVVPKVQCFLLEKGQEVQLLGQVELCFSKDLQLQNC 254

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.27.1	0.824
3rd Layer	3.1.27	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	RNS2	RNS2 (RIBONUCLEASE 2); RNA binding / endoribonuclease/ ribonuclease T2; S-like ribonuclease ; May remobilize phosphate, particularly when cells senesce or when phosphate becomes limiting (259 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	VGDH2	VGDH2 (Vanguard 1 homolog 2); enzyme inhibitor/ pectinesterase; Vanguard 1 homolog 2 (VGDH2); F [...] (588 aa)							•		0.690
	VGDH1	VGDH1; enzyme inhibitor/ pectinesterase; VGDH1; FUNCTIONS IN- enzyme inhibitor activity, pectin [...] (588 aa)							•		0.679
	AT5G07410	pectinesterase family protein; pectinesterase family protein; FUNCTIONS IN- pectinesterase acti [...] (361 aa)							•		0.669
	PPME1	PPME1; pectinesterase; Encodes a protein with pectin methylesterase activity. The protein expre [...] (361 aa)							•		0.647
	AT5G40670	PQ-loop repeat family protein / transmembrane family protein; PQ-loop repeat family protein / t [...] (270 aa)				•					0.577
	AT3G51280	male sterility MS5, putative; male sterility MS5, putative; FUNCTIONS IN- binding; LOCATED IN- [...] (430 aa)							•		0.534
	AT3G22790	kinase interacting family protein; kinase interacting family protein; FUNCTIONS IN- molecular_f [...] (1694 aa)							•		0.534
	AT3G23600	dienelactone hydrolase family protein; dienelactone hydrolase family protein; FUNCTIONS IN- hyd [...] (239 aa)				•					0.532
	CER8	long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protei [...] (660 aa)							•		0.501
	ADF1	ADF1 (ACTIN DEPOLYMERIZING FACTOR 1); actin binding; Actin-depolymerizing factor (ADF) and cofi [...] (150 aa)				•					0.472

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	141
pfam00445	182	pfam00445, Ribonuclease_T2, Ribonuclease T2 family	1e-26
cd01061	195	cd01061, RNase_T2_euk, Ribonuclease T2 (RNase T2)	1e-24
cd00374	195	cd00374, RNase_T2, Ribonuclease T2 (RNase T2) is a	1e-24
cd01062	184	cd01062, RNase_T2_prok, Ribonuclease T2 (RNase T2)	2e-08
COG3719	249	COG3719, Rna, Ribonuclease I [Translation, ribosom	1e-07

>gnl|CDD|215923 pfam00445, Ribonuclease_T2, Ribonuclease T2 family

 Score = 97.9 bits (244), Expect = 1e-26
 Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 3   WQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQ 62
            +WEKHGTC+      +  YFS  L L  K N+  +L  AG  PS+ + Y L  I +A++
Sbjct: 83  HEWEKHGTCALSG-LSQDDYFSKALKLKDKLNLLDILASAGIKPSDGKTYTLSEIENALK 141

Query: 63  NAFHATPKLDCSKDAVN------ELHLCFYKD-FKPRDC 94
            A    P L C++   N      E+ +C  KD F P DC
Sbjct: 142 KATGKAPTLKCTRGDKNGIQYLTEVRICLDKDLFIPIDC 180

Length = 182

>gnl|CDD|238512 cd01061, RNase_T2_euk, Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

 Score = 93.2 bits (232), Expect = 1e-24
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 15/115 (13%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +W KHGTCS  ++ ++Y YF T L L  K ++ ++L +AG +PS    Y L  I +AI+ 
Sbjct: 86  EWNKHGTCSSTLLYNQYDYFDTALKLKDKLDLLKILAKAGIVPSTQ-TYTLSDIQNAIKA 144

Query: 64  AFHATPKLDCSKD----AVNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCPK 113
           A   TP + CSKD     +NE+ +CF K   +  DC   R P        S+CP 
Sbjct: 145 ATGVTPVIKCSKDPGKGELNEIWICFDKKGGEFIDC--PRPP-------KSTCPD 190

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the eukaryotic RNase T2 family members. Length = 195

>gnl|CDD|238220 cd00374, RNase_T2, Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

 Score = 92.9 bits (231), Expect = 1e-24
 Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 15/115 (13%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +W KHGTCS  +  D+  YF T L L  K ++  +L +AG  PS+   Y L  I +AI+ 
Sbjct: 86  EWNKHGTCSGTL-LDQDDYFRTALKLLDKLDLLSILAKAGIKPSDGSTYTLAFIQNAIKA 144

Query: 64  AFHATPKLDCSKD----AVNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCPK 113
           A  ATP L C+KD     + E+ +CF KD  K  DC     P        S+CP 
Sbjct: 145 ATGATPSLKCTKDPGKGLLTEIWICFDKDALKFIDC-----PTPGK----STCPA 190

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Length = 195

>gnl|CDD|238513 cd01062, RNase_T2_prok, Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

 Score = 50.5 bits (121), Expect = 2e-08
 Identities = 33/119 (27%), Positives = 43/119 (36%), Gaps = 28/119 (23%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +W KHGTCS     D  +YF+   NL     +   L     L  N      G   S I+ 
Sbjct: 82  EWRKHGTCSG---LDPDAYFAKARNLREALKIPPELR---LLAGNI-----GVTASEIRQ 130

Query: 64  AF-HATP-------KLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKY 114
           AF  A P        + C    + E+ +C  KD K   C     P  D      +CP  
Sbjct: 131 AFIKANPGLPPDAVSVSCQGGLLTEVRICLDKDLKFAAC-----PTADR----DNCPAG 180

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the prokaryotic RNase T2 family members. Length = 184

>gnl|CDD|226242 COG3719, Rna, Ribonuclease I [Translation, ribosomal structure and biogenesis]

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 26/116 (22%), Positives = 39/116 (33%), Gaps = 20/116 (17%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPL--GGIVSAI 61
           +W KHGTCS         YF+TT  L+        L          +   L    I  A 
Sbjct: 139 EWRKHGTCSGLSQEA---YFATTRRLF------EELKLPPVRKLLADGKTLSRDEIEQAF 189

Query: 62  QNAFHATP----KLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPK 113
             A         ++ C  + + EL +C  KD +   C+ +    +        C K
Sbjct: 190 DKANGGLKGDAVRVSCQGNYLTELRICLDKDLQNAACLADLPQPDPGN-----CRK 240

Length = 249

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	141
cd01061	195	RNase_T2_euk Ribonuclease T2 (RNase T2) is a wides	99.97
cd00374	195	RNase_T2 Ribonuclease T2 (RNase T2) is a widesprea	99.97
PF00445	189	Ribonuclease_T2: Ribonuclease T2 family; InterPro:	99.96
KOG1642	263	consensus Ribonuclease, T2 family [RNA processing	99.96
cd01062	184	RNase_T2_prok Ribonuclease T2 (RNase T2) is a wide	99.94
COG3719	249	Rna Ribonuclease I [Translation, ribosomal structu	99.88
PRK10095	268	ribonuclease I; Provisional	99.87

>cd01061 RNase_T2_euk Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

Probab=99.97  E-value=6.8e-31  Score=202.15  Aligned_cols=107  Identities=38%  Similarity=0.717  Sum_probs=96.6

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecC----C
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK----D   76 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~----~   76 (141)
                      |+|||+|||||++.+..++.+||.+|++|++++|+..+|+++||+|+ ++.|++++|++||++++|..|.|.|.+    +
T Consensus        83 w~hEW~KHGTC~~~~~~~~~~YF~~a~~l~~~~~~~~~L~~~~I~P~-~~~~~~~~i~~ai~~~~g~~~~l~C~~~~~~~  161 (195)
T cd01061          83 WEHEWNKHGTCSSTLLYNQYDYFDTALKLKDKLDLLKILAKAGIVPS-TQTYTLSDIQNAIKAATGVTPVIKCSKDPGKG  161 (195)
T ss_pred             HHHHHhhCcEeCCCcccCHHHHHHHHHHHHHHCCHHHHHHHCCcCCC-CcEEcHHHHHHHHHHHHCCCcEEEeCcCCCCc
Confidence            47999999999985335899999999999999999999999999998 899999999999999999999999987    5


Q ss_pred             CcceEEEEEeCC-CceecCCCCCCCCCCCCCCCCCCC-Cceee
Q 032417           77 AVNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCP-KYVSL  117 (141)
Q Consensus        77 ~L~EV~iC~~~~-~~~~~Cp~~~~~~~~~~~~~~~Cp-~~i~~  117 (141)
                      +|.||+||||++ +++++||..         ...+|| ..|.|
T Consensus       162 ~L~Ev~iC~~k~~~~~~~C~~~---------~~~~C~~~~i~f  195 (195)
T cd01061         162 ELNEIWICFDKKGGEFIDCPRP---------PKSTCPDDGIKF  195 (195)
T ss_pred             EEEEEEEEEECCCCeEeeCCCC---------CCCCCCCCceEC
Confidence            899999999999 799999964         357899 55654

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the eukaryotic RNase T2 family members.

>cd00374 RNase_T2 Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

Probab=99.97  E-value=1.9e-30  Score=198.45  Aligned_cols=107  Identities=39%  Similarity=0.683  Sum_probs=97.5

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecC----C
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK----D   76 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~----~   76 (141)
                      |+|||+|||||++.. .++.+||+++++|++++|++++|+..||+|+++..|+.++|++||++++|..|.|.|.+    +
T Consensus        83 w~hEW~KHGTC~~~~-~~~~~YF~~a~~l~~~~ni~~~L~~~~i~p~~~~~~~~~~i~~ai~~~~g~~~~l~C~~~~~~~  161 (195)
T cd00374          83 WKHEWNKHGTCSGTL-LDQDDYFRTALKLLDKLDLLSILAKAGIKPSDGSTYTLAFIQNAIKAATGATPSLKCTKDPGKG  161 (195)
T ss_pred             HHHHHhcCceecCCc-CCHHHHHHHHHHHHHhCCHHHHHHHCCCcCCCCceecHHHHHHHHHHHHCCCcEEEeccCCCCc
Confidence            579999999999853 48999999999999999999999999999998899999999999999999999999987    6


Q ss_pred             CcceEEEEEeCC-CceecCCCCCCCCCCCCCCCCCCC-Cceee
Q 032417           77 AVNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCP-KYVSL  117 (141)
Q Consensus        77 ~L~EV~iC~~~~-~~~~~Cp~~~~~~~~~~~~~~~Cp-~~i~~  117 (141)
                      +|.||+|||+++ +++++||..         ..++|| ..|.|
T Consensus       162 ~L~Ev~iC~~~~~~~~~~C~~~---------~~~~C~~~~i~~  195 (195)
T cd00374         162 LLTEIWICFDKDALKFIDCPTP---------GKSTCPADGIKF  195 (195)
T ss_pred             EEEEEEEEEECCCCeEEeCCCC---------CCCCCCCCcEEC
Confidence            899999999999 899999964         257899 65654

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen.

>PF00445 Ribonuclease_T2: Ribonuclease T2 family; InterPro: IPR001568 The fungal ribonucleases T2 from Aspergillus oryzae, M from Aspergillus saitoi and Rh from Rhizopus niveus are structurally and functionally related 30 Kd glycoproteins [] that cleave the 3'-5' internucleotide linkage of RNA via a nucleotide 2',3'-cyclic phosphate intermediate (3

Probab=99.96  E-value=5.7e-30  Score=195.71  Aligned_cols=95  Identities=44%  Similarity=0.825  Sum_probs=87.2

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHh-CCCceEEecCC---
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF-HATPKLDCSKD---   76 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~-g~~p~l~C~~~---   76 (141)
                      |+|||.|||||++....++.+||++|++|++++|+.++|+++||+|+.+.+|++++|++||++++ |..|.|.|.++   
T Consensus        86 w~hEW~KHGtC~~~~~~~~~~YF~~a~~l~~~~~~~~~L~~~gI~p~~~~~~~~~~i~~al~~~~~~~~~~l~C~~~~~~  165 (189)
T PF00445_consen   86 WKHEWEKHGTCSGMDFIDQYDYFSTALKLYKKLNLPKILANAGIVPSNGKTYSLSDIRDALKQAFNGVRPQLRCSRNQVN  165 (189)
T ss_dssp             HHHHHHHTGGGGTTTSSSHHHHHHHHHHHHHHCHHHHHHHHTTHCSCSSEEEEHHHHHHHHHHHHTSSGEEEEEECTETT
T ss_pred             HHhcceeeeEEcCCchhhHHHHHHHHHHHHHhccchHHHhhcccCCCccccccHHHHHHHHHHHcCCCceEEEEecCCCC
Confidence            58999999999996433499999999999999999999999999999999999999999999999 99999999886   


Q ss_pred             ---CcceEEEEEeCCC-ceecCC
Q 032417           77 ---AVNELHLCFYKDF-KPRDCI   95 (141)
Q Consensus        77 ---~L~EV~iC~~~~~-~~~~Cp   95 (141)
                         +|.||+|||++++ ++|+||
T Consensus       166 ~~~~L~ei~iC~~~~~~~~idCp  188 (189)
T PF00445_consen  166 GEQYLTEIRICFDKDLFQFIDCP  188 (189)
T ss_dssp             SEEEEEEEEEEEETTSSSEE--S
T ss_pred             CcEEEEEEEEEEeCCCCeEeCCc
Confidence               8999999999996 899998

1.27.1 from EC). Two histidines residues have been shown [, ] to be involved in the catalytic mechanism of RNase T2 and Rh. These residues and the region around them are highly conserved in a number of other RNAses that have been found to be evolutionary related to these fungal enzymes.; GO: 0003723 RNA binding, 0033897 ribonuclease T2 activity; PDB: 1IOO_A 3D3Z_A 1UCG_B 1UCC_A 1J1F_A 1V9H_A 1UCD_A 1J1G_A 1UCA_A 1BK7_A ....

>KOG1642 consensus Ribonuclease, T2 family [RNA processing and modification]

Probab=99.96  E-value=1.1e-28  Score=195.33  Aligned_cols=120  Identities=38%  Similarity=0.762  Sum_probs=105.4

Q ss_pred             CcchhccccccCCCCCC--CHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecCC--
Q 032417            1 MHWQWEKHGTCSFPVVR--DEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKD--   76 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~--~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~~--   76 (141)
                      |.|||+|||||+.+++.  ++.+||+.+++|++++|+..+|.++||.|+ ...|++++|++||+.++|..|.+.|.++  
T Consensus       119 W~HEweKHGTCa~sv~~~~dq~~YF~~~L~l~~k~~l~~~L~~~gI~p~-~~~y~l~~I~nAi~~~~G~~p~I~C~rd~~  197 (263)
T KOG1642|consen  119 WKHEWEKHGTCASSVFPLCDQHKYFETTLKLKQKLDLLSILKKAGIKPD-DNFYSLADIKNAIKEAIGKTPGIECLRDSK  197 (263)
T ss_pred             hhhhhhccCchhhhhhhhhhHHHHHHHHHHHHHHHhHHHHHHHcCCCCC-CCceeHHHHHHHHHHHhCCCCceEeccCcc
Confidence            68999999999988743  999999999999999999999999999996 5799999999999999999999999874  


Q ss_pred             ----CcceEEEEEeCCCceecCCCCCCCCCCCCCCCCCCCCceeecCCccCCCC
Q 032417           77 ----AVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSSGVD  126 (141)
Q Consensus        77 ----~L~EV~iC~~~~~~~~~Cp~~~~~~~~~~~~~~~Cp~~i~~p~~~~~~~~  126 (141)
                          +|.||++||.|++++++|.....     ....+.||..+.||.|.+-.+.
T Consensus       198 ~nv~~l~qI~lCl~kd~~~~d~~~~~~-----~~P~g~~~~~~~~ps~~~r~~~  246 (263)
T KOG1642|consen  198 HNVSQLGQIRLCLLKDFSPRDCIECPT-----EFPRGSCPTFIQFPSFGPRPSE  246 (263)
T ss_pred             cCceEeeeEEEEeecCcccccccCCCC-----cccCCcccccccCCCCCCCCcc
Confidence                59999999999998888875421     1346899999999988766553

>cd01062 RNase_T2_prok Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

Probab=99.94  E-value=6e-27  Score=178.77  Aligned_cols=98  Identities=27%  Similarity=0.432  Sum_probs=86.6

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCc----eEEecCC
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATP----KLDCSKD   76 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p----~l~C~~~   76 (141)
                      ++|||+|||||++   .++.+||++|++|++++|++++|+..++.+  +  |+.++|++||++++|..+    .|.|.++
T Consensus        79 w~hEW~KHGtC~~---~~~~~YF~~a~~l~~~~~~~~~l~~~~~~~--~--~~~~~i~~a~~~~~~~~~~~~~~~~C~~~  151 (184)
T cd01062          79 IRHEWRKHGTCSG---LDPDAYFAKARNLREALKIPPELRLLAGNI--G--VTASEIRQAFIKANPGLPPDAVSVSCQGG  151 (184)
T ss_pred             hHHHHhcCCcCCC---CCHHHHHHHHHHHHHHcCcchhhhhccccC--C--cCHHHHHHHHHHHCCCCCCceEEEEECCC
Confidence            5899999999998   489999999999999999999999865432  2  999999999999998766    8999999


Q ss_pred             CcceEEEEEeCCCceecCCCCCCCCCCCCCCCCCCCCc
Q 032417           77 AVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKY  114 (141)
Q Consensus        77 ~L~EV~iC~~~~~~~~~Cp~~~~~~~~~~~~~~~Cp~~  114 (141)
                      +|.||+||||+++++++||..         ..+.||..
T Consensus       152 ~L~Ei~iC~~~~~~~~~C~~~---------~~~~C~~~  180 (184)
T cd01062         152 LLTEVRICLDKDLKFAACPTA---------DRDNCPAG  180 (184)
T ss_pred             eEEEEEEEeCcccCcccCCcc---------ccCCCCCC
Confidence            999999999999999999964         24679954

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the prokaryotic RNase T2 family members.

>COG3719 Rna Ribonuclease I [Translation, ribosomal structure and biogenesis]

Probab=99.88  E-value=5.9e-23  Score=162.32  Aligned_cols=103  Identities=24%  Similarity=0.456  Sum_probs=87.5

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCC----CceEEecCC
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHA----TPKLDCSKD   76 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~----~p~l~C~~~   76 (141)
                      ++|||+|||||++   .++.+||.++++|+++++++..+....    +++++|..+|++||.+.+|.    .+.+.|..+
T Consensus       136 ~~heW~KHGtC~g---~s~~~YFa~~r~l~~~l~~p~~~~~~a----~~~~ls~~ei~~AF~~~n~~~~~~~v~vsc~~~  208 (249)
T COG3719         136 ERHEWRKHGTCSG---LSQEAYFATTRRLFEELKLPPVRKLLA----DGKTLSRDEIEQAFDKANGGLKGDAVRVSCQGN  208 (249)
T ss_pred             hhhhHHhcCccCC---CCHHHHHHHHHHHHHHhcCCccccccc----cccccCHHHHHHHHHHhCCCCCchheEEEeecc
Confidence            4899999999999   599999999999999999998866542    47899999999999999963    468999999


Q ss_pred             CcceEEEEEeCCCceecCCCCCCCCCCCCCCCCCCCCce
Q 032417           77 AVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYV  115 (141)
Q Consensus        77 ~L~EV~iC~~~~~~~~~Cp~~~~~~~~~~~~~~~Cp~~i  115 (141)
                      +|+||+||||++++.++|-.. +    |......|++.+
T Consensus       209 ~LtEl~Icl~~~~~~~ac~~~-~----~~~~~~~C~~~~  242 (249)
T COG3719         209 YLTELRICLDKDLQNAACLAD-L----PQPDPGNCRKTF  242 (249)
T ss_pred             ceeeEEEEEccccccchhhcc-C----CCCCcccccccc
Confidence            999999999999999999332 1    112467899873

>PRK10095 ribonuclease I; Provisional

Probab=99.87  E-value=5.6e-22  Score=160.01  Aligned_cols=109  Identities=17%  Similarity=0.248  Sum_probs=83.6

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhH---HHHhcCCCCCCCcccchHHHHHHHHHHhCCC----ceEEe
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTR---VLNEAGYLPSNTEKYPLGGIVSAIQNAFHAT----PKLDC   73 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~---~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~----p~l~C   73 (141)
                      ++|||+|||||++   .++.+||.++++|++++|++.   +|...     .+++|+.++|++||++++|..    +.|+|
T Consensus       149 ~~heW~KHGtC~~---~~~~~YF~~al~L~~kvn~s~~~~~L~~~-----~Gk~~s~~~I~~Ai~~a~G~~~~~~~~L~C  220 (268)
T PRK10095        149 ERYEYAKHGACFG---FDPDAYFGTMVRLNQEIKESEAGKFLADN-----YGKTVSRRDFDAAFAKSWGKENVKAVKLTC  220 (268)
T ss_pred             HHHHHHhCCeecC---CCHHHHHHHHHHHHHHhchhhhhhhhhcC-----CCcEEcHHHHHHHHHHHhCCCCCCcceEEe
Confidence            4799999999987   589999999999999999754   45543     578999999999999999854    59999


Q ss_pred             cCC--CcceEEEEEeCCCceecCCCCCCCCCCCCCCCCCCCCceeecCC
Q 032417           74 SKD--AVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVY  120 (141)
Q Consensus        74 ~~~--~L~EV~iC~~~~~~~~~Cp~~~~~~~~~~~~~~~Cp~~i~~p~~  120 (141)
                      .++  .|.||+||++++.. -.=+....+  .+...+++|++.|++++.
T Consensus       221 ~~~~~~L~EV~ICl~~~~~-~~~l~~~~~--~~~~~~~~C~~~~~i~~~  266 (268)
T PRK10095        221 QGNPAYLTEIQISLKADAI-NAPLSANSF--LPQPHPGNCGKQFVIDKA  266 (268)
T ss_pred             CCCCcEEEEEEEEcccccc-cCCchhhhc--cCCCCCCCCCCCeeeCCC
Confidence            987  79999999999842 111111011  111246789999888654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	141
1jy5_A	212	Rnase-Related Protein From Calystegia Sepium Length		6e-29
1sgl_A	209	The Three-Dimensional Structure And X-Ray Sequence		4e-26
1dix_A	208	Crystal Structure Of Rnase Le Length = 208		2e-07
1bol_A	222	The Crystal Structure Of Ribonuclease Rh From Rhizo		2e-07
1iyb_A	208	Crystal Structure Of The Nicotiana Glutinosa Ribonu		6e-07
1iqq_A	200	Crystal Structure Of Japanese Pear S3-Rnase Length		1e-06
1vcz_A	217	Crystal Structure Of The Rnase Nt In Complex With 5		2e-06
3t0o_A	238	Crystal Structure Analysis Of Human Rnase T2 Length		1e-05

>pdb|1JY5|A Chain A, Rnase-Related Protein From Calystegia Sepium Length = 212

Iteration: 1
 Score =  122 bits (307), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Query: 1   MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSA 60
           + ++W KHGTCS PV+ ++Y YFSTTL LYFKYN++ +L+E+GYLPSNT +Y + GI+SA
Sbjct: 98  LAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSA 157
Query: 61  IQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPV 119
           IQ+A   TP + C  DAV ++ +CF K  + ++C     P      ++S+CP  VSLP+
Sbjct: 158 IQSALRVTPVVKCKSDAVEQVQICFDKTLQLQEC-----PS-----TASTCPSLVSLPI 206

>pdb|1SGL|A Chain A, The Three-Dimensional Structure And X-Ray Sequence Reveal That Trichomaglin Is A Novel S-Like Ribonuclease Length = 209

Iteration: 1
 Score =  113 bits (282), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 12/116 (10%)
Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           Q+EKHGTC+ PV++ E++YF  TL L+ KYNV + L +AG + SN++ Y L  IV A+++
Sbjct: 101 QYEKHGTCASPVIKGEWNYFKKTLKLFMKYNVDKALEDAGIVASNSKMYDLKDIVVAVES 160
Query: 64  AFHATPKLDCSKDA-VNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLP 118
           A  A PKL C ++  V +L LCF KDFKPRDC+              SCP+YVSLP
Sbjct: 161 AVGARPKLRCDEEGLVQKLSLCFDKDFKPRDCV-----------QVGSCPRYVSLP 205

>pdb|1DIX|A Chain A, Crystal Structure Of Rnase Le Length = 208

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTC+  V+ ++++YF   L+L  + ++  +L  A   P + E Y L  I +AI++
Sbjct: 96  EWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHP-DGESYDLVNIRNAIKS 154
Query: 64  AFHATPKLDCSKDAVNELHL 83
           A   TP + C+ D      L
Sbjct: 155 AIGYTPWIQCNVDQSGNSQL 174

>pdb|1BOL|A Chain A, The Crystal Structure Of Ribonuclease Rh From Rhizopus Niveus At 2.0 A Resolution Length = 222

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 19/126 (15%)
Query: 4   QWEKHGTC----------SFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYP 53
           +W KHGTC          ++    D   YF   ++L  +YNV +  +  G  P  T  Y 
Sbjct: 105 EWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITPGGT--YT 162
Query: 54  LGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPK 113
              + SAI++ F A  K+DCS   ++++ L FY   + RD  +       +  S+ SC  
Sbjct: 163 ATEMQSAIESYFGAKAKIDCSSGTLSDVALYFY--VRGRDTYVIT-----DALSTGSCSG 215
Query: 114 YVSLPV 119
            V  P 
Sbjct: 216 DVEYPT 221

>pdb|1IYB|A Chain A, Crystal Structure Of The Nicotiana Glutinosa Ribonuclease Nw Length = 208

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +WEKHGTC+  V  D++ YF   L+L  + N+  +L  AG  P +   Y L  I +AI++
Sbjct: 97  EWEKHGTCAENVF-DQHGYFKKALDLKNQINLLEILQGAGIHP-DGGFYSLNSIKNAIRS 154
Query: 64  AFHATPKLDCSKDAVNELHL 83
           A    P ++C+ D      L
Sbjct: 155 AIGYAPGIECNVDESGNSQL 174

>pdb|1IQQ|A Chain A, Crystal Structure Of Japanese Pear S3-Rnase Length = 200

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYF--KYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
           +W KHG+C +P + +E  YF T + +Y   K NV+R+L++A   P + +K  L  I +AI
Sbjct: 84  EWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEP-DGKKRALLDIENAI 142
Query: 62  QNA 64
           +N 
Sbjct: 143 RNG 145

>pdb|1VCZ|A Chain A, Crystal Structure Of The Rnase Nt In Complex With 5'-Gmp Length = 217

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +W KHGTCS      E +YF   L+   K N+   L  A   P N E Y L  I  AI+ 
Sbjct: 97  EWLKHGTCS---ALGERAYFQAALDFRKKSNLLENLKNAEITPRNGEHYTLESIKKAIEE 153
Query: 64  AFHATPKLDCSKDA-----VNELHLCFYK 87
               +P ++C+ D      + +++LC  K
Sbjct: 154 GVGHSPYIECNVDTQGNHQIYQVYLCVDK 182

>pdb|3T0O|A Chain A, Crystal Structure Analysis Of Human Rnase T2 Length = 238

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 4   QWEKHGTCSFPV--VRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
           +WEKHGTC+  V  +  +  YF  +L LY + ++  VL + G  PS    Y +     A+
Sbjct: 90  EWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPS-INYYQVADFKDAL 148
Query: 62  QNAFHATPKLDC---SKD----AVNELHLCFYK 87
              +   PK+ C   S+D     + ++ LC  K
Sbjct: 149 ARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTK 181

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	141
1jy5_A	212	CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2	1e-32
1sgl_A	209	Trichomaglin; S-like ribonuclease, X-RAY sequence,	1e-31
1ucd_A	190	Ribonuclease MC; alpha plus beta, hydrolase; HET:	2e-22
1iyb_A	208	Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP	4e-22
1vcz_A	217	RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.8	1e-21
3t0o_A	238	Ribonuclease T2, ribonuclease 6; rnaset2, alpha/be	6e-20
1bol_A	222	Protein (ribonuclease RH); ribonucleases, hydrolas	8e-20
1iqq_A	200	S3-RNAse; japanese PEAR, SELF-incompatibilit famil	2e-19
3d3z_A	247	Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {A	2e-19
1ioo_A	196	SF11-RNAse; SELF-incompatibility ribonuclease, hyd	1e-18
2pqx_A	245	Ribonuclease I; hydrolase; HET: MES; 1.42A {Escher	5e-16

>1jy5_A CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2.05A {Calystegia sepium} SCOP: d.124.1.1 Length = 212

 Score =  113 bits (284), Expect = 1e-32
 Identities = 57/124 (45%), Positives = 84/124 (67%), Gaps = 10/124 (8%)

Query: 1   MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSA 60
           + ++W KHGTCS PV+ ++Y YFSTTL LYFKYN++ +L+E+GYLPSNT +Y + GI+SA
Sbjct: 98  LAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSA 157

Query: 61  IQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVY 120
           IQ+A   TP + C  DAV ++ +CF K  + ++C     P      ++S+CP  VSLP+ 
Sbjct: 158 IQSALRVTPVVKCKSDAVEQVQICFDKTLQLQEC-----PS-----TASTCPSLVSLPIK 207

Query: 121 MSSG 124
            +  
Sbjct: 208 NTIK 211

>1sgl_A Trichomaglin; S-like ribonuclease, X-RAY sequence, MASS SPEC analysis, hydrolase; 2.20A {Trichosanthes lepiniana} SCOP: d.124.1.1 Length = 209

 Score =  110 bits (277), Expect = 1e-31
 Identities = 56/119 (47%), Positives = 76/119 (63%), Gaps = 12/119 (10%)

Query: 1   MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSA 60
              Q+EKHGTC+ PV++ E++YF  TL L+ KYNV + L +AG + SN++ Y L  IV A
Sbjct: 98  WGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNVDKALEDAGIVASNSKMYDLKDIVVA 157

Query: 61  IQNAFHATPKLDCSKD-AVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLP 118
           +++A  A PKL C ++  V +L LCF KDFKPRDC+              SCP+YVSLP
Sbjct: 158 VESAVGARPKLRCDEEGLVQKLSLCFDKDFKPRDCV-----------QVGSCPRYVSLP 205

>1ucd_A Ribonuclease MC; alpha plus beta, hydrolase; HET: U5P; 1.30A {Momordica charantia} SCOP: d.124.1.1 PDB: 1bk7_A* 1ucc_A* 1uca_A* 1v9h_A* 1j1f_A* 1ucg_A 1j1g_A* Length = 190

 Score = 86.6 bits (214), Expect = 2e-22
 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 3   WQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQ 62
            +W KHGTCS     ++ +YF   +++   Y++   L      P+         I   ++
Sbjct: 83  HEWTKHGTCSESTF-NQAAYFKLAVDMRNNYDIIGALRPHAAGPN-GRTKSRQAIKGFLK 140

Query: 63  NAFHATPKLDCSKDAVN------ELHLCFYKDFKP-RDC 94
             F   P L C  D         ++  CF +D     DC
Sbjct: 141 AKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDC 179

>1iyb_A Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP; 1.50A {Nicotiana glutinosa} SCOP: d.124.1.1 PDB: 1dix_A Length = 208

 Score = 86.2 bits (213), Expect = 4e-22
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 17/125 (13%)

Query: 2   HWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
             +WEKHGTC+  V  D++ YF   L+L  + N+  +L  AG  P +   Y L  I +AI
Sbjct: 95  SHEWEKHGTCAENVF-DQHGYFKKALDLKNQINLLEILQGAGIHP-DGGFYSLNSIKNAI 152

Query: 62  QNAFHATPKLDCSKDAV-----NELHLCF-YKDFKPRDCIIERSPENDNYFSSSSCPKYV 115
           ++A    P ++C+ D        ++++C         +C           F    C   +
Sbjct: 153 RSAIGYAPGIECNVDESGNSQLYQIYICVDGSGSNLIEC---------PIFPRGKCGSSI 203

Query: 116 SLPVY 120
             P +
Sbjct: 204 EFPTF 208

>1vcz_A RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.80A {Nicotiana glutinosa} PDB: 1vd1_A* 1vd3_A* Length = 217

 Score = 85.5 bits (211), Expect = 1e-21
 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 17/130 (13%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           +W KHGTCS      E +YF   L+   K N+   L  A   P N E Y L  I  AI+ 
Sbjct: 97  EWLKHGTCS---ALGERAYFQAALDFRKKSNLLENLKNAEITPRNGEHYTLESIKKAIEE 153

Query: 64  AFHATPKLDCSKDA-----VNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCPKYVSL 117
               +P ++C+ D      + +++LC  K      DC          +     C   +  
Sbjct: 154 GVGHSPYIECNVDTQGNHQIYQVYLCVDKTATDFIDC--------PIFPHGRGCGSKIEF 205

Query: 118 PVYMSSGVDD 127
           P + S    D
Sbjct: 206 PPFSSESDHD 215

>3t0o_A Ribonuclease T2, ribonuclease 6; rnaset2, alpha/beta fold, RNA cleavage, hydrol; HET: NAG; 1.59A {Homo sapiens} Length = 238

 Score = 81.4 bits (200), Expect = 6e-20
 Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 14/125 (11%)

Query: 1   MHWQWEKHGTCS--FPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIV 58
              +WEKHGTC+     +  +  YF  +L LY + ++  VL + G  P +   Y +    
Sbjct: 87  WKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKP-SINYYQVADFK 145

Query: 59  SAIQNAFHATPKLDCSKDAVN-------ELHLCFYK-DFKPRDC---IIERSPENDNYFS 107
            A+   +   PK+ C   + +       ++ LC  K D + ++C     + SP+ + + +
Sbjct: 146 DALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQNCTEPGEQPSPKQEVWLA 205

Query: 108 SSSCP 112
           + +  
Sbjct: 206 NGAAE 210

>1bol_A Protein (ribonuclease RH); ribonucleases, hydrolase; 2.00A {Rhizopus niveus} SCOP: d.124.1.1 Length = 222

 Score = 80.7 bits (198), Expect = 8e-20
 Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 19/127 (14%)

Query: 2   HWQWEKHGTCSFPVVRDEYS----------YFSTTLNLYFKYNVTRVLNEAGYLPSNTEK 51
             +W KHGTC      D Y           YF   ++L  +YNV +  +  G  P  T  
Sbjct: 103 SHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITPGGT-- 160

Query: 52  YPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSC 111
           Y    + SAI++ F A  K+DCS   ++++ L FY   +    I        +  S+ SC
Sbjct: 161 YTATEMQSAIESYFGAKAKIDCSSGTLSDVALYFYVRGRDTYVIT-------DALSTGSC 213

Query: 112 PKYVSLP 118
              V  P
Sbjct: 214 SGDVEYP 220

>1iqq_A S3-RNAse; japanese PEAR, SELF-incompatibilit family ribonuclease, hydrolase; HET: NAG BMA MAN; 1.50A {Pyrus pyrifolia} SCOP: d.124.1.1 Length = 200

 Score = 79.0 bits (194), Expect = 2e-19
 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 14/119 (11%)

Query: 3   WQWEKHGTCSFPVVRDEYSYFSTTLNLYF--KYNVTRVLNEAGYLPSNTEKYPLGGIVSA 60
            +W KHG+C +P + +E  YF T + +Y   K NV+R+L++A   P    K  L  I +A
Sbjct: 83  KEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPDGK-KRALLDIENA 141

Query: 61  IQNAFH-ATPKLDCSKDA----VNELHLCFYKDFKP-RDCIIERSPENDNYFSSSSCPK 113
           I+N      PKL C K      + E+ LC  K  +   DC     P      S   CP 
Sbjct: 142 IRNGADNKKPKLKCQKKGTTTELVEITLCSDKSGEHFIDC-----PHPFEPISPHYCPT 195

>3d3z_A Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {Aspergillus niger} Length = 247

 Score = 79.9 bits (196), Expect = 2e-19
 Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 1   MHWQWEKHGTCSFPVVRDEYS----------YFSTTLNLYFKYNVTRVLNEAGYLPSNTE 50
              +W KHGTC   +    Y+          +F   ++L+   +    L++AG  PS   
Sbjct: 108 WEHEWNKHGTCINTIEPSCYTDYYAQEEVGDFFQQVVDLFKTLDSYTALSDAGITPSEDA 167

Query: 51  KYPLGGIVSAIQNAFH-ATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSS 109
            Y L  I  A+        P + C   A+++L+  F             S         S
Sbjct: 168 TYKLSDIEDALAAIHDGYPPYVGCEDGALSQLYYYFNVKGSAIGGTYVASER----LEDS 223

Query: 110 SCPK 113
           +C  
Sbjct: 224 NCKD 227

>1ioo_A SF11-RNAse; SELF-incompatibility ribonuclease, hydrolase; HET: NAG BMA MAN; 1.55A {Nicotiana alata} SCOP: d.124.1.1 Length = 196

 Score = 77.1 bits (189), Expect = 1e-18
 Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 9/98 (9%)

Query: 3   WQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQ 62
           +Q+ KHG+C      ++ +YF   L L  K+++ R L     +P ++  Y    I  AI+
Sbjct: 86  YQYIKHGSCCQKR-YNQNTYFGLALRLKDKFDLLRTLQTHRIIPGSS--YTFQDIFDAIK 142

Query: 63  NAFHATPKLDCSKDA-----VNELHLCFYKDFKP-RDC 94
                 P + C++       + E+ +CF  +      C
Sbjct: 143 TVSQENPDIKCAEVTKGTPELYEIGICFTPNADSMFRC 180

>2pqx_A Ribonuclease I; hydrolase; HET: MES; 1.42A {Escherichia coli} PDB: 2ea1_A* 2pqy_A* 2z70_A* Length = 245

 Score = 71.1 bits (173), Expect = 5e-16
 Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 14/121 (11%)

Query: 4   QWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQN 63
           ++ KHG C      D  +YF T + L  +   +          +  +        +A   
Sbjct: 129 EYAKHGACFGF---DPDAYFGTMVRLNQEIKESEAGKFLA--DNYGKTVSRRDFDAAFAK 183

Query: 64  AFHATP----KLDCSKDA--VNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSL 117
           ++        KL C  +   + E+ +    D                     +C K   +
Sbjct: 184 SWGKENVKAVKLTCQGNPAYLTEIQISIKADAINAPLSANSFLPQ---PHPGNCGKTFVI 240

Query: 118 P 118
            
Sbjct: 241 D 241

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	141
1sgl_A	209	Trichomaglin; S-like ribonuclease, X-RAY sequence,	100.0
1jy5_A	212	CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2	100.0
1vcz_A	217	RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.8	100.0
1iyb_A	208	Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP	100.0
1ucd_A	190	Ribonuclease MC; alpha plus beta, hydrolase; HET:	99.97
1ioo_A	196	SF11-RNAse; SELF-incompatibility ribonuclease, hyd	99.97
3d3z_A	247	Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {A	99.97
1iqq_A	200	S3-RNAse; japanese PEAR, SELF-incompatibilit famil	99.97
1bol_A	222	Protein (ribonuclease RH); ribonucleases, hydrolas	99.97
3t0o_A	238	Ribonuclease T2, ribonuclease 6; rnaset2, alpha/be	99.96
2pqx_A	245	Ribonuclease I; hydrolase; HET: MES; 1.42A {Escher	99.94
4dvk_A	165	E(RNS) glycoprotein; T2 ribonuclease, virus envelo	98.6
2ciw_A	299	Chloroperoxidase; oxidoreductase, heme, iron, chlo	85.41

>1sgl_A Trichomaglin; S-like ribonuclease, X-RAY sequence, MASS SPEC analysis, hydrolase; 2.20A {Trichosanthes lepiniana} SCOP: d.124.1.1

Probab=100.00  E-value=4.1e-35  Score=226.95  Aligned_cols=110  Identities=51%  Similarity=0.947  Sum_probs=103.2

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecC-CCcc
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK-DAVN   79 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~-~~L~   79 (141)
                      |+|||+|||||++.++.++.+||++|++|++++|++++|+++||+|+.+++|++++|++||++++|..|.|+|.+ +.|.
T Consensus        98 W~hEw~KHGTC~~~~~~~~~~YF~~a~~L~~~~~l~~~L~~~gI~P~~g~~yt~~~I~~Ai~~~~g~~p~l~C~~~~~L~  177 (209)
T 1sgl_A           98 WGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNVDKALEDAGIVASNSKMYDLKDIVVAVESAVGARPKLRCDEEGLVQ  177 (209)
T ss_dssp             HHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHTCHHHHHHHHTCCCCSSCEEEHHHHHHHHHHHHSSCCEEEECTTSBEE
T ss_pred             HHHhhhcCccccccccccHHHHHHHHHHHHHHcChHHHHHHCCCcCCCCccccHHHHHHHHHHHhCCCeEEEECCCCeEE
Confidence            579999999999987669999999999999999999999999999988899999999999999999999999987 7999


Q ss_pred             eEEEEEeCCCceecCCCCCCCCCCCCCCCCCCCCceeecCCc
Q 032417           80 ELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYM  121 (141)
Q Consensus        80 EV~iC~~~~~~~~~Cp~~~~~~~~~~~~~~~Cp~~i~~p~~~  121 (141)
                      ||+|||++++++++|+.           .+.||..|.||+++
T Consensus       178 Ev~iC~~~~~~~i~C~~-----------~~~C~~~i~~p~~~  208 (209)
T 1sgl_A          178 KLSLCFDKDFKPRDCVQ-----------VGSCPRYVSLPEIP  208 (209)
T ss_dssp             EEEEEEETTCCEECCCC-----------CCCSCSEEECCCCC
T ss_pred             EEEEEeCCCccEeCCCC-----------CCCCCCCeEeCCCC
Confidence            99999999999999941           46899999999986

>1jy5_A CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2.05A {Calystegia sepium} SCOP: d.124.1.1

Probab=100.00  E-value=4.2e-35  Score=227.35  Aligned_cols=113  Identities=50%  Similarity=0.994  Sum_probs=104.3

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecCCCcce
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNE   80 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~~~L~E   80 (141)
                      |+|||+|||||++.++.++.+||++|++|++++|++++|+++||+|+++++|++++|++||++++|..|.|+|.++.|.|
T Consensus        98 W~hEw~KHGTC~~~~~~~~~~YF~~a~~l~~~~nl~~~L~~~gI~Ps~g~~yt~~~I~~Ai~~~~g~~p~l~C~~~~l~e  177 (212)
T 1jy5_A           98 LAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSAIQSALRVTPVVKCKSDAVEQ  177 (212)
T ss_dssp             HHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHSCHHHHHHTTTCCCCSSCCEEHHHHHHHHHHHHSSCCEEEEETTEEEE
T ss_pred             HHHhhhhCceeCcccccCHHHHHHHHHHHHHhcCHHHHHHHcCCcCCCCceEcHHHHHHHHHHhhCCCEEEEeCCCCcce
Confidence            47999999999997645999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             EEEEEeCCCceecCCCCCCCCCCCCCCCCCCCCceeecCCccC
Q 032417           81 LHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSS  123 (141)
Q Consensus        81 V~iC~~~~~~~~~Cp~~~~~~~~~~~~~~~Cp~~i~~p~~~~~  123 (141)
                      |+|||++++++++||.          ..+.||+.|.||++.+.
T Consensus       178 v~lC~~~~~~~i~C~~----------~~~~C~~~i~~p~~~~~  210 (212)
T 1jy5_A          178 VQICFDKTLQLQECPS----------TASTCPSLVSLPIKNTI  210 (212)
T ss_dssp             EEEEECTTSCEECCCC----------CCCCSCSEEBCCCCC--
T ss_pred             EEEEEcCCCcEecCCC----------CCCCCCCCEEeCCCCCC
Confidence            9999999999999983          35689999999999864

>1vcz_A RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.80A {Nicotiana glutinosa} PDB: 1vd1_A* 1vd3_A*

Probab=100.00  E-value=2.5e-34  Score=223.77  Aligned_cols=116  Identities=30%  Similarity=0.512  Sum_probs=99.6

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecC-----
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK-----   75 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~-----   75 (141)
                      |+|||+|||||++.   ++.+||++|++|++++|++++|+++||+|+.+++|++++|++||++++|..|.|+|.+     
T Consensus        94 W~hEw~KHGTC~~~---~~~~YF~~a~~l~~~~n~~~~L~~~gI~Ps~g~~~t~~~I~~Ai~~~~g~~p~l~C~~~~~~~  170 (217)
T 1vcz_A           94 WSHEWLKHGTCSAL---GERAYFQAALDFRKKSNLLENLKNAEITPRNGEHYTLESIKKAIEEGVGHSPYIECNVDTQGN  170 (217)
T ss_dssp             HHHHHHHTGGGTTS---CHHHHHHHHHHHHHHHCHHHHHHHTTCCCEEEEEEEHHHHHHHHHHHHSSCCEEEEEECTTSC
T ss_pred             HhhhccCCeecCCC---CHHHHHHHHHHHHHHcccHHHHHHCCCccCcCccccHHHHHHHHHHHHCCCeEEEEeecCCCC
Confidence            58999999999995   9999999999999999999999999999987889999999999999999999999973     


Q ss_pred             CCcceEEEEEeCC-CceecCCCCCCCCCCCCCCCCCCCCceeecCCccCCCCC
Q 032417           76 DAVNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSSGVDD  127 (141)
Q Consensus        76 ~~L~EV~iC~~~~-~~~~~Cp~~~~~~~~~~~~~~~Cp~~i~~p~~~~~~~~~  127 (141)
                      ..|.||+||||++ +++++||..        ...+.||..|.||++++.+..+
T Consensus       171 ~~L~Ev~iC~~~~~~~~i~C~~~--------~~~~~C~~~i~~p~~~~~~~~~  215 (217)
T 1vcz_A          171 HQIYQVYLCVDKTATDFIDCPIF--------PHGRGCGSKIEFPPFSSESDHD  215 (217)
T ss_dssp             EEEEEEEEEEETTSSSEECCSSC--------CCCCCCCSEEEECCC-------
T ss_pred             eEEEEEEEEecCCCCeeeeCCCC--------CCCCCCCCCeEEcCCCCccccc
Confidence            3799999999999 589999853        1225899999999998766543

>1iyb_A Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP; 1.50A {Nicotiana glutinosa} SCOP: d.124.1.1 PDB: 1dix_A

Probab=100.00  E-value=4.6e-34  Score=220.90  Aligned_cols=109  Identities=28%  Similarity=0.571  Sum_probs=99.4

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecC-----
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK-----   75 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~-----   75 (141)
                      |+|||+|||||++.+ .++.+||++|++|++++|++++|+++||+| .+++|++++|++||++++|..|.|+|.+     
T Consensus        94 W~hEw~KHGTC~~~~-~~q~~YF~~a~~l~~~~~~~~~L~~~gI~P-~~~~~t~~~I~~Ai~~~~g~~p~l~C~~~~~~~  171 (208)
T 1iyb_A           94 WSHEWEKHGTCAENV-FDQHGYFKKALDLKNQINLLEILQGAGIHP-DGGFYSLNSIKNAIRSAIGYAPGIECNVDESGN  171 (208)
T ss_dssp             HHHHHHHTGGGGTTT-CCHHHHHHHHHHHHHHCCHHHHHHHTTCCS-SSCEEEHHHHHHHHHHHHSSCCEEEEEECTTCC
T ss_pred             HHhhccCCeeeCccc-cCHHHHHHHHHHHHHHcChHHHHHHCCccc-CCceEeHHHHHHHHHHHhCCCeEEEEeeCCCCC
Confidence            589999999999965 399999999999999999999999999999 5789999999999999999999999973     


Q ss_pred             CCcceEEEEEeCC-CceecCCCCCCCCCCCCCCCCCCCCceeecCC
Q 032417           76 DAVNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCPKYVSLPVY  120 (141)
Q Consensus        76 ~~L~EV~iC~~~~-~~~~~Cp~~~~~~~~~~~~~~~Cp~~i~~p~~  120 (141)
                      ..|.||+||||++ +++++||..         ..+.||..|.||+|
T Consensus       172 ~~L~Ev~iC~~~~~~~~i~C~~~---------~~~~C~~~i~~p~f  208 (208)
T 1iyb_A          172 SQLYQIYICVDGSGSNLIECPIF---------PRGKCGSSIEFPTF  208 (208)
T ss_dssp             EEEEEEEEEEETTSSSBCCCSCC---------CCCCCCSEEECCCC
T ss_pred             eEEEEEEEEecCCCCeeecCCCC---------CCCCCCCCcCcCCC
Confidence            3799999999999 689999853         34689999999987

>1ucd_A Ribonuclease MC; alpha plus beta, hydrolase; HET: U5P; 1.30A {Momordica charantia} SCOP: d.124.1.1 PDB: 1bk7_A* 1ucc_A* 1uca_A* 1v9h_A* 1j1f_A* 1ucg_A 1j1g_A*

Probab=99.97  E-value=2.2e-32  Score=208.89  Aligned_cols=103  Identities=22%  Similarity=0.453  Sum_probs=94.4

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecC-----
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK-----   75 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~-----   75 (141)
                      |+|||+|||||+...+ ++.+||++|++|++++|++++|+++||+|+ +++|++++|++||++++|..|.|+|.+     
T Consensus        81 W~hEw~KHGTC~~~~~-~~~~YF~~a~~l~~~~~~~~~L~~~~I~P~-~~~~t~~~I~~ai~~~~g~~p~l~C~~~~~~~  158 (190)
T 1ucd_A           81 WSHEWTKHGTCSESTF-NQAAYFKLAVDMRNNYDIIGALRPHAAGPN-GRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTK  158 (190)
T ss_dssp             HHHHHHHTGGGGTTTC-CHHHHHHHHHHHHHTCCHHHHHGGGTCSCS-SSEEEHHHHHHHHHHHHSSCCEEEEEECTTTC
T ss_pred             HHhccccCcEeCCCCC-CHHHHHHHHHHHHHHcCHHHHHHHCCCCCC-CceEeHHHHHHHHHHHHCCCeEEEeccCCCCC
Confidence            5899999999998654 999999999999999999999999999998 778999999999999999999999973     


Q ss_pred             -CCcceEEEEEeCC-CceecCCCCCCCCCCCCCCCCCCCCceee
Q 032417           76 -DAVNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCPKYVSL  117 (141)
Q Consensus        76 -~~L~EV~iC~~~~-~~~~~Cp~~~~~~~~~~~~~~~Cp~~i~~  117 (141)
                       ..|.||+||||++ +++++||.            ..|+.++.|
T Consensus       159 ~~~L~Ev~iC~~~~~~~~i~Cp~------------~~C~~~~~f  190 (190)
T 1ucd_A          159 VSYLVQVVACFAQDGSTLIDCTR------------DTCGANFIF  190 (190)
T ss_dssp             CEEEEEEEEEEETTSSSEECCCC------------CCCCSEEEC
T ss_pred             CcEEEEEEEEecCCCCeeccCCC------------CCCCCCCCC
Confidence             4899999999999 78999983            479998765

>1ioo_A SF11-RNAse; SELF-incompatibility ribonuclease, hydrolase; HET: NAG BMA MAN; 1.55A {Nicotiana alata} SCOP: d.124.1.1

Probab=99.97  E-value=5.3e-32  Score=207.54  Aligned_cols=105  Identities=24%  Similarity=0.518  Sum_probs=93.9

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecC-----
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK-----   75 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~-----   75 (141)
                      |+|||+|||||++.++ ++.+||++|++|++++|++++|+++||+|+.  +|++++|++||++++|..|.|+|..     
T Consensus        84 W~hEw~KHGTC~~~~~-~q~~YF~~a~~L~~~~n~~~~L~~~gI~P~~--~~t~~~I~~Ai~~~~g~~p~l~C~~~~~~~  160 (196)
T 1ioo_A           84 WKYQYIKHGSCCQKRY-NQNTYFGLALRLKDKFDLLRTLQTHRIIPGS--SYTFQDIFDAIKTVSQENPDIKCAEVTKGT  160 (196)
T ss_dssp             HHHHHHHTGGGCTTTC-CHHHHHHHHHHHHHTCCHHHHHHHTTCCTTE--EECHHHHHHHHHHHHSSCCEEEEECSSTTC
T ss_pred             HHhhCcCCcCcCCCcC-CHHHHHHHHHHHHHHCCHHHHHHHCCCccCC--CcCHHHHHHHHHHHhCCCeEEEeeecCCCC
Confidence            5799999999999764 8999999999999999999999999999964  5999999999999999999999952     


Q ss_pred             CCcceEEEEEeCCCc-eecCCCCCCCCCCCCCCCCCC--CCceeecC
Q 032417           76 DAVNELHLCFYKDFK-PRDCIIERSPENDNYFSSSSC--PKYVSLPV  119 (141)
Q Consensus        76 ~~L~EV~iC~~~~~~-~~~Cp~~~~~~~~~~~~~~~C--p~~i~~p~  119 (141)
                      ..|.||+||||++++ +++||..           ..|  +..|.||+
T Consensus       161 ~~L~Ev~iC~~~~~~~~i~Cp~~-----------~~C~~~~~i~fp~  196 (196)
T 1ioo_A          161 PELYEIGICFTPNADSMFRCPQS-----------DTCDKTAKVLFRR  196 (196)
T ss_dssp             CEEEEEEEEECTTSSSEECCCCC-----------CCSCTTSCEEECC
T ss_pred             eEEEEEEEEEeCCCCEEeCCcCC-----------CCCCCCCCeecCC
Confidence            479999999999985 9999842           579  45699984

>3d3z_A Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {Aspergillus niger}

Probab=99.97  E-value=5.3e-32  Score=214.86  Aligned_cols=114  Identities=24%  Similarity=0.410  Sum_probs=101.3

Q ss_pred             CcchhccccccCCCC-------C---CCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHh-CCCc
Q 032417            1 MHWQWEKHGTCSFPV-------V---RDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF-HATP   69 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~-------~---~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~-g~~p   69 (141)
                      |+|||+|||||++.+       +   .++.+||++|++|++++|+.++|+++||+|+.+++|++++|++||++++ |..|
T Consensus       108 W~hEW~KHGTC~~~~~~~C~~~y~~~~~~~~YF~~al~L~~k~n~~~~L~~~gI~P~~~~tyt~~~I~~Ai~~~~~g~~p  187 (247)
T 3d3z_A          108 WEHEWNKHGTCINTIEPSCYTDYYAQEEVGDFFQQVVDLFKTLDSYTALSDAGITPSEDATYKLSDIEDALAAIHDGYPP  187 (247)
T ss_dssp             HHHHHHHTGGGCGGGSGGGBSSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHTTCCCCSSCCBCHHHHHHHHHTTTTTCCC
T ss_pred             HHHhhhcCeeecccCCcccccccccccCHHHHHHHHHHHHHhcCcHHHHHHCCccCCCCceECHHHHHHHHHHhcCCCCe
Confidence            589999999998742       1   3688999999999999999999999999999888999999999999999 8999


Q ss_pred             eEEecCCCcceEEEEEeCCC-----ceecCCCCCCCCCCCCCCCCCCCCc-eeecCCccC
Q 032417           70 KLDCSKDAVNELHLCFYKDF-----KPRDCIIERSPENDNYFSSSSCPKY-VSLPVYMSS  123 (141)
Q Consensus        70 ~l~C~~~~L~EV~iC~~~~~-----~~~~Cp~~~~~~~~~~~~~~~Cp~~-i~~p~~~~~  123 (141)
                      .|+|.++.|.||+||||+++     +++.|+..         ..+.||.. |.||+++..
T Consensus       188 ~l~C~~~~L~Ev~iC~~~~~~~~~~~~~~~~~~---------~~~~C~~~~I~~pp~~~~  238 (247)
T 3d3z_A          188 YVGCEDGALSQLYYYFNVKGSAIGGTYVASERL---------EDSNCKDSGIKYPPKYSS  238 (247)
T ss_dssp             EEEEETTEEEEEEEEEEEESCTTTSEEEECCCS---------SCBSSCSSCBBCCCTTCC
T ss_pred             EEEeCCCEEEEEEEEEecCCCccCCceeECCCC---------CCCCCCCCceEeCCCCCC
Confidence            99999999999999999986     46777753         35789987 999999853

>1iqq_A S3-RNAse; japanese PEAR, SELF-incompatibilit family ribonuclease, hydrolase; HET: NAG BMA MAN; 1.50A {Pyrus pyrifolia} SCOP: d.124.1.1

Probab=99.97  E-value=2.4e-31  Score=204.42  Aligned_cols=111  Identities=34%  Similarity=0.598  Sum_probs=95.2

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhh--hhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHh-CCCceEEecC--
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLY--FKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF-HATPKLDCSK--   75 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~--~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~-g~~p~l~C~~--   75 (141)
                      |+|||+|||||+...+.++.+||++|++|+  +++|++++|+++||+|+ +++|++++|++||++++ |..|.|+|.+  
T Consensus        81 W~hEw~KHGTC~~~~~~~~~~YF~~a~~l~~~~k~n~~~~L~~~~I~P~-~~~~t~~~I~~Ai~~~~~g~~p~l~C~~~~  159 (200)
T 1iqq_A           81 WDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPD-GKKRALLDIENAIRNGADNKKPKLKCQKKG  159 (200)
T ss_dssp             HHHHHHHTGGGSTTTSCSHHHHHHHHHHHHTTTCCCHHHHHHHTTCCSS-CCEECHHHHHHHHHTTTTTCCCEEEEEEET
T ss_pred             HHhhhhCCcCcCCcccCCHHHHHHHHHHHHhhcccCHHHHHHHcCCccC-CCeecHHHHHHHHHHhcCCCceEEEEeeCC
Confidence            589999999999653359999999999999  77999999999999997 56799999999999999 8999999984  


Q ss_pred             --CCcceEEEEEeCCC-ceecCCCCCCCCCCCCCCCCCCCCc-eee
Q 032417           76 --DAVNELHLCFYKDF-KPRDCIIERSPENDNYFSSSSCPKY-VSL  117 (141)
Q Consensus        76 --~~L~EV~iC~~~~~-~~~~Cp~~~~~~~~~~~~~~~Cp~~-i~~  117 (141)
                        ..|.||+|||++++ ++++||...     +....+.||.. |.|
T Consensus       160 ~~~~L~Ev~iC~~~~~~~~i~C~~~~-----~~~~~~~Cp~~~i~y  200 (200)
T 1iqq_A          160 TTTELVEITLCSDKSGEHFIDCPHPF-----EPISPHYCPTNNIKY  200 (200)
T ss_dssp             TEEEEEEEEEEECTTSSSEECCSCCC-----CTTSTTCCCSSCEEC
T ss_pred             CCeEEEEEEEEEECCCCeEEeCCCCC-----CCCCCCCCCccCcCC
Confidence              37999999999997 699998641     11346799974 764

>1bol_A Protein (ribonuclease RH); ribonucleases, hydrolase; 2.00A {Rhizopus niveus} SCOP: d.124.1.1

Probab=99.97  E-value=1.7e-31  Score=208.72  Aligned_cols=108  Identities=31%  Similarity=0.521  Sum_probs=96.6

Q ss_pred             CcchhccccccCCCC-------C---CCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCce
Q 032417            1 MHWQWEKHGTCSFPV-------V---RDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPK   70 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~-------~---~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~   70 (141)
                      |+|||+|||||++.+       +   .++.+||++|++|++++|++++|+++||+|+.  +|++++|++||++++|..|.
T Consensus       102 W~hEW~KHGTC~~~~~~~c~~~y~~~~~~~~YF~~al~L~~~~n~~~~L~~~gI~P~~--~yt~~~I~~Ai~~~~g~~p~  179 (222)
T 1bol_A          102 WSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITPGG--TYTATEMQSAIESYFGAKAK  179 (222)
T ss_dssp             HHHHHHHTGGGCGGGSGGGCTTCCTTHHHHHHHHHHHHHHHHSCHHHHHHTTTCCSSE--EEEHHHHHHHHHHHHSSCCE
T ss_pred             HHhhhhcCeeeccccCccccccccccccHHHHHHHHHHHHHHcCcHHHHHHcCCCCCC--cCcHHHHHHHHHHHhCCCeE
Confidence            589999999999742       1   36899999999999999999999999999974  59999999999999999999


Q ss_pred             EEecCCCcceEEEEEeCC--CceecCCCCCCCCCCCCCCCCCCCCceeecC
Q 032417           71 LDCSKDAVNELHLCFYKD--FKPRDCIIERSPENDNYFSSSSCPKYVSLPV  119 (141)
Q Consensus        71 l~C~~~~L~EV~iC~~~~--~~~~~Cp~~~~~~~~~~~~~~~Cp~~i~~p~  119 (141)
                      |+|.++.|.||+|||+++  +++++|+..         ..+.||..|.||+
T Consensus       180 l~C~~~~L~Ev~ic~~~~g~~~~~~~~~~---------~~~~C~~~i~~pp  221 (222)
T 1bol_A          180 IDCSSGTLSDVALYFYVRGRDTYVITDAL---------STGSCSGDVEYPT  221 (222)
T ss_dssp             EEEETTEEEEEEEEEEEETTTEEEEECCS---------CCCSCCSEEEECC
T ss_pred             EEECCCEEeEEEEEEEcCCCCCeEECCCC---------CCCCCCCCeEeCC
Confidence            999999999999999998  478998753         3578999999986

>3t0o_A Ribonuclease T2, ribonuclease 6; rnaset2, alpha/beta fold, RNA cleavage, hydrol; HET: NAG; 1.59A {Homo sapiens}

Probab=99.96  E-value=5.5e-30  Score=202.50  Aligned_cols=122  Identities=25%  Similarity=0.509  Sum_probs=97.7

Q ss_pred             CcchhccccccCCCC--CCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecCC--
Q 032417            1 MHWQWEKHGTCSFPV--VRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKD--   76 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~--~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~~--   76 (141)
                      |+|||+|||||++.+  +.++.+||++|++|++++|++++|+++||+|+.. +|++++|++||++++|..|.|+|.++  
T Consensus        87 W~hEW~KHGTC~~~~~~~~~q~~YF~~a~~L~~~~n~~~~L~~~gI~P~~~-~yt~~~I~~Ai~~~~g~~P~l~C~~~~~  165 (238)
T 3t0o_A           87 WKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSIN-YYQVADFKDALARVYGVIPKIQCLPPSQ  165 (238)
T ss_dssp             HHHHCCCCCHHHTTSGGGCSHHHHHHHHHHHHHHHCHHHHHHHTTCCCCSS-CEEHHHHHHHHHHHHSSCCEEEEECCC-
T ss_pred             HHHhhhcCceecCCccccccHHHHHHHHHHHHHHcccHHHHHhcCccCCCC-cccHHHHHHHHHHHHCCCeEEEEecCCC
Confidence            579999999999862  3489999999999999999999999999999854 89999999999999999999999741  


Q ss_pred             -----CcceEEEEEeC-CCceecCCCCCCCCC-----------CCCCCCCCCCCc-eeecCCccC
Q 032417           77 -----AVNELHLCFYK-DFKPRDCIIERSPEN-----------DNYFSSSSCPKY-VSLPVYMSS  123 (141)
Q Consensus        77 -----~L~EV~iC~~~-~~~~~~Cp~~~~~~~-----------~~~~~~~~Cp~~-i~~p~~~~~  123 (141)
                           .|.||+||||+ ++++|+||.......           ........|.+. |.+||.++.
T Consensus       166 ~~~~~~L~EV~iC~d~~~~~~idCp~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~  230 (238)
T 3t0o_A          166 DEEVQTIGQIELCLTKQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKT  230 (238)
T ss_dssp             --CCCEEEEEEEEEETTTCCEECCC--------------------CTTCEECCSSEEBCCCCC--
T ss_pred             CCcccEEEEEEEEeecCCCEEecCCCCCCCCccccccccccccccCCceeecCCCCccCCCCccc
Confidence                 59999999999 678999998522110           012345789866 888887653

>2pqx_A Ribonuclease I; hydrolase; HET: MES; 1.42A {Escherichia coli} PDB: 2ea1_A* 2pqy_A* 2z70_A*

Probab=99.94  E-value=2.4e-27  Score=187.42  Aligned_cols=109  Identities=17%  Similarity=0.278  Sum_probs=87.3

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchh---HHHHhcCCCCCCCcccchHHHHHHHHHHhCCCc----eEEe
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVT---RVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATP----KLDC   73 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~---~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p----~l~C   73 (141)
                      |+|||+|||||++   .++.+||++|++|++++|++   ++|+..     .+++|++++|++||++++|..|    .|.|
T Consensus       126 w~hEW~KHGTC~~---~~~~~YF~~a~~l~~~~n~~~~~~~l~~~-----~g~~~t~~~I~~Ai~~~~g~~p~~~v~l~C  197 (245)
T 2pqx_A          126 ERYEYAKHGACFG---FDPDAYFGTMVRLNQEIKESEAGKFLADN-----YGKTVSRRDFDAAFAKSWGKENVKAVKLTC  197 (245)
T ss_dssp             HHHHHHHHTGGGT---CCHHHHHHHHHHHHHHHHHSHHHHHHHHT-----TTSEEEHHHHHHHHHHHHCGGGGGGEEEEE
T ss_pred             HHHHhhhCCeecC---CCHHHHHHHHHHHHHHhccchHHHHhhcC-----CCceEcHHHHHHHHHHHhCCCCCcceEEEE
Confidence            5799999999999   49999999999999999875   457762     3679999999999999999875    9999


Q ss_pred             cCC--CcceEEEEEeCCCceecCCCC-CCCCCCCCCCCCCCCCceeecCCc
Q 032417           74 SKD--AVNELHLCFYKDFKPRDCIIE-RSPENDNYFSSSSCPKYVSLPVYM  121 (141)
Q Consensus        74 ~~~--~L~EV~iC~~~~~~~~~Cp~~-~~~~~~~~~~~~~Cp~~i~~p~~~  121 (141)
                      .++  +|.||+|||++++  ++|+.. ..+...|  ..++||+.|.||++.
T Consensus       198 ~~~~~~L~Ev~iC~~~~~--~~~~~~~~~~i~cp--~~~~C~~~~~~~~~g  244 (245)
T 2pqx_A          198 QGNPAYLTEIQISIKADA--INAPLSANSFLPQP--HPGNCGKTFVIDKAG  244 (245)
T ss_dssp             ETTTTEEEEEEEEEEGGG--TTSCCCTTSBCCCS--CCBSCCSEEECCCSC
T ss_pred             CCCCCEEEEEEEEEcccc--cCCCccccccccCC--CCCCCCCCeEeCCCC
Confidence            987  8999999999985  344322 0011111  246899999999874

>4dvk_A E(RNS) glycoprotein; T2 ribonuclease, virus envelope glycoprotein, viral protein; HET: NAG BMA MAN; 2.21A {Bovine viral diarrhea virus} PDB: 4dw5_A* 4dvl_A* 4dvn_A* 4dw3_A* 4dw4_A* 4dwc_A* 4dwa_A* 4dw7_A*

Probab=98.60  E-value=4.6e-09  Score=78.26  Aligned_cols=26  Identities=19%  Similarity=0.474  Sum_probs=22.4

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHh
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNL   29 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L   29 (141)
                      |+|||+|||||+.   .+|.+||.++...
T Consensus        72 WeHEWnKHGTCS~---ynQe~YFdL~~~a   97 (165)
T 4dvk_A           72 QRHEWNKHGWCNW---YNIEPWILLMNKT   97 (165)
T ss_dssp             HHHHHHHHTHHHH---SSHHHHHHHHHHH
T ss_pred             HHHHHHcCCccCC---CCHHHHHHHHHHH
Confidence            5899999999997   4999999987544

>2ciw_A Chloroperoxidase; oxidoreductase, heme, iron, chloride, manganese, pyrrolidone carboxylic acid, glycoprotein, metal-binding; HET: NAG BMA MAN HEM; 1.15A {Caldariomyces fumago} SCOP: a.39.3.1 a.39.3.1 PDB: 1cpo_A* 2civ_A* 2cix_A* 2ciy_A* 2ciz_A* 2cj0_A* 2cj1_A* 2cj2_A* 2cpo_A* 2j18_A* 2j19_A* 2j5m_A*

Probab=85.41  E-value=0.45  Score=38.30  Aligned_cols=36  Identities=17%  Similarity=0.275  Sum_probs=32.2

Q ss_pred             chhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCc
Q 032417           34 NVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATP   69 (141)
Q Consensus        34 ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p   69 (141)
                      .-.++|+++|+.|.+++.++..++..|+.+.+|..+
T Consensus        31 PgLNaLANHGyLpR~G~nit~~~l~~al~~~~n~~~   66 (299)
T 2ciw_A           31 PALNALANHGYIPHDGRAISRETLQNAFLNHMGIAN   66 (299)
T ss_dssp             HHHHHHHHTTSSCTTCEEECHHHHHHHHHHHHCBCH
T ss_pred             HHHHHHHhcCCcCCCCCccCHHHHHHHHHHhcCCCH
Confidence            456889999999999988999999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	141
d1sgla_	206	d.124.1.1 (A:) Trichomaglin {Gourd (Trichosanthes	4e-33
d1jy5a_	207	d.124.1.1 (A:) RNase-related protein {Hedge bindwe	1e-32
d1bola_	222	d.124.1.1 (A:) Ribonuclease Rh {Rhizopus niveus [T	1e-22
d1iqqa_	200	d.124.1.1 (A:) S3-RNase {Japanese pear (Pyrus pyri	4e-22
d1ucda_	190	d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Mom	6e-21
d1iooa_	196	d.124.1.1 (A:) Gemetophytic self-incompatibility a	5e-20
d1iyba_	208	d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxI	3e-18

>d1sgla_ d.124.1.1 (A:) Trichomaglin {Gourd (Trichosanthes lepiniana) [TaxId: 282652]} Length = 206

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Trichomaglin
species: Gourd (Trichosanthes lepiniana) [TaxId: 282652]

 Score =  113 bits (283), Expect = 4e-33
 Identities = 56/119 (47%), Positives = 76/119 (63%), Gaps = 12/119 (10%)

Query: 1   MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSA 60
              Q+EKHGTC+ PV++ E++YF  TL L+ KYNV + L +AG + SN++ Y L  IV A
Sbjct: 95  WGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNVDKALEDAGIVASNSKMYDLKDIVVA 154

Query: 61  IQNAFHATPKLDCSKD-AVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLP 118
           +++A  A PKL C ++  V +L LCF KDFKPRDC+              SCP+YVSLP
Sbjct: 155 VESAVGARPKLRCDEEGLVQKLSLCFDKDFKPRDCV-----------QVGSCPRYVSLP 202

>d1jy5a_ d.124.1.1 (A:) RNase-related protein {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Length = 207

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase-related protein
species: Hedge bindweed (Calystegia sepium) [TaxId: 47519]

 Score =  112 bits (281), Expect = 1e-32
 Identities = 57/119 (47%), Positives = 83/119 (69%), Gaps = 10/119 (8%)

Query: 1   MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSA 60
           + ++W KHGTCS PV+ ++Y YFSTTL LYFKYN++ +L+E+GYLPSNT +Y + GI+SA
Sbjct: 97  LAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSA 156

Query: 61  IQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPV 119
           IQ+A   TP + C  DAV ++ +CF K  + ++C     P      ++S+CP  VSLP+
Sbjct: 157 IQSALRVTPVVKCKSDAVEQVQICFDKTLQLQEC-----PS-----TASTCPSLVSLPI 205

>d1bola_ d.124.1.1 (A:) Ribonuclease Rh {Rhizopus niveus [TaxId: 4844]} Length = 222

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease Rh
species: Rhizopus niveus [TaxId: 4844]

 Score = 86.8 bits (214), Expect = 1e-22
 Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 19/128 (14%)

Query: 1   MHWQWEKHGTCSFPVVRDEYS----------YFSTTLNLYFKYNVTRVLNEAGYLPSNTE 50
              +W KHGTC      D Y           YF   ++L  +YNV +  +  G  P  T 
Sbjct: 102 WSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITPGGT- 160

Query: 51  KYPLGGIVSAIQNAFHATPKLDCSKDAVNELHLCFYKDFKPRDCIIERSPENDNYFSSSS 110
            Y    + SAI++ F A  K+DCS   ++++ L FY   +    I        +  S+ S
Sbjct: 161 -YTATEMQSAIESYFGAKAKIDCSSGTLSDVALYFYVRGRDTYVIT-------DALSTGS 212

Query: 111 CPKYVSLP 118
           C   V  P
Sbjct: 213 CSGDVEYP 220

>d1iqqa_ d.124.1.1 (A:) S3-RNase {Japanese pear (Pyrus pyrifolia) [TaxId: 3767]} Length = 200

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: S3-RNase
species: Japanese pear (Pyrus pyrifolia) [TaxId: 3767]

 Score = 85.2 bits (210), Expect = 4e-22
 Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 14/121 (11%)

Query: 1   MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYF--KYNVTRVLNEAGYLPSNTEKYPLGGIV 58
              +W KHG+C +P + +E  YF T + +Y   K NV+R+L++A   P    K  L  I 
Sbjct: 81  WDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPDGK-KRALLDIE 139

Query: 59  SAIQNAF-HATPKLDCSKDA----VNELHLCFYKDFKP-RDCIIERSPENDNYFSSSSCP 112
           +AI+N   +  PKL C K      + E+ LC  K  +   DC     P      S   CP
Sbjct: 140 NAIRNGADNKKPKLKCQKKGTTTELVEITLCSDKSGEHFIDC-----PHPFEPISPHYCP 194

Query: 113 K 113
            
Sbjct: 195 T 195

>d1ucda_ d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Momordica charantia) [TaxId: 3673]} Length = 190

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease MC1
species: Bitter gourd (Momordica charantia) [TaxId: 3673]

 Score = 81.7 bits (201), Expect = 6e-21
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 9/100 (9%)

Query: 2   HWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAI 61
             +W KHGTCS     ++ +YF   +++   Y++   L      P+         I   +
Sbjct: 82  SHEWTKHGTCSEST-FNQAAYFKLAVDMRNNYDIIGALRPHAAGPNG-RTKSRQAIKGFL 139

Query: 62  QNAFHATPKLDCSKDAVN------ELHLCFYKDFKP-RDC 94
           +  F   P L C  D         ++  CF +D     DC
Sbjct: 140 KAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDC 179

>d1iooa_ d.124.1.1 (A:) Gemetophytic self-incompatibility associated SF11-RNase {Winged tobacco (Nicotiana alata) [TaxId: 4087]} Length = 196

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Gemetophytic self-incompatibility associated SF11-RNase
species: Winged tobacco (Nicotiana alata) [TaxId: 4087]

 Score = 79.4 bits (195), Expect = 5e-20
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 1   MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSA 60
             +Q+ KHG+C      ++ +YF   L L  K+++ R L     +P ++  Y    I  A
Sbjct: 84  WKYQYIKHGSCCQKR-YNQNTYFGLALRLKDKFDLLRTLQTHRIIPGSS--YTFQDIFDA 140

Query: 61  IQNAFHATPKLDCSKDA-----VNELHLCFYKDFKP-RDC 94
           I+      P + C++       + E+ +CF  +      C
Sbjct: 141 IKTVSQENPDIKCAEVTKGTPELYEIGICFTPNADSMFRC 180

>d1iyba_ d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxId: 35889]} Length = 208

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase NW
species: Nicotiana glutinosa [TaxId: 35889]

 Score = 74.8 bits (183), Expect = 3e-18
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 1   MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSA 60
              +WEKHGTC+  V  D++ YF   L+L  + N+  +L  AG  P +   Y L  I +A
Sbjct: 94  WSHEWEKHGTCAENV-FDQHGYFKKALDLKNQINLLEILQGAGIHP-DGGFYSLNSIKNA 151

Query: 61  IQNAFHATPKLDCSKDA-----VNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCPKY 114
           I++A    P ++C+ D      + ++++C         +C           F    C   
Sbjct: 152 IRSAIGYAPGIECNVDESGNSQLYQIYICVDGSGSNLIEC---------PIFPRGKCGSS 202

Query: 115 VSLPVY 120
           +  P +
Sbjct: 203 IEFPTF 208

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	141
d1sgla_	206	Trichomaglin {Gourd (Trichosanthes lepiniana) [Tax	100.0
d1jy5a_	207	RNase-related protein {Hedge bindweed (Calystegia	100.0
d1iyba_	208	RNase NW {Nicotiana glutinosa [TaxId: 35889]}	100.0
d1ucda_	190	Ribonuclease MC1 {Bitter gourd (Momordica charanti	99.97
d1iooa_	196	Gemetophytic self-incompatibility associated SF11-	99.97
d1bola_	222	Ribonuclease Rh {Rhizopus niveus [TaxId: 4844]}	99.97
d1iqqa_	200	S3-RNase {Japanese pear (Pyrus pyrifolia) [TaxId:	99.97
d2ciwa1	120	Cloroperoxidase {Fungus (Caldariomyces fumago) [Ta	92.3

>d1sgla_ d.124.1.1 (A:) Trichomaglin {Gourd (Trichosanthes lepiniana) [TaxId: 282652]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Trichomaglin
species: Gourd (Trichosanthes lepiniana) [TaxId: 282652]

Probab=100.00  E-value=1.3e-35  Score=227.55  Aligned_cols=110  Identities=51%  Similarity=0.947  Sum_probs=103.1

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecC-CCcc
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK-DAVN   79 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~-~~L~   79 (141)
                      |+|||+|||||++..+.++.+||++|++|++++|++++|+++||+|+.++.|++++|++||++++|..|.|.|.+ ++|.
T Consensus        95 w~hEW~KHGTC~~~~~~~~~~YF~~al~L~~~~~~~~~L~~~gI~P~~~~~y~~~~i~~al~~~~g~~~~l~C~~~~~L~  174 (206)
T d1sgla_          95 WGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNVDKALEDAGIVASNSKMYDLKDIVVAVESAVGARPKLRCDEEGLVQ  174 (206)
T ss_dssp             HHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHTCHHHHHHHHTCCCCSSCEEEHHHHHHHHHHHHSSCCEEEECTTSBEE
T ss_pred             HHHHHHhcccccCcccccHHHHHHHHHHHHHhcCHHHHHHHCCCCCCCCceeeHHHHHHHHHHHhCCCCEEEECCCCeEE
Confidence            479999999999987779999999999999999999999999999998899999999999999999999999976 5899


Q ss_pred             eEEEEEeCCCceecCCCCCCCCCCCCCCCCCCCCceeecCCc
Q 032417           80 ELHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYM  121 (141)
Q Consensus        80 EV~iC~~~~~~~~~Cp~~~~~~~~~~~~~~~Cp~~i~~p~~~  121 (141)
                      ||+||||+++++++||.           .++||+.|.||++.
T Consensus       175 Ev~iC~d~~~~~~~C~~-----------~~~Cp~~i~~P~~~  205 (206)
T d1sgla_         175 KLSLCFDKDFKPRDCVQ-----------VGSCPRYVSLPEIP  205 (206)
T ss_dssp             EEEEEEETTCCEECCCC-----------CCCSCSEEECCCCC
T ss_pred             EEEEEECCCceEeCCCC-----------CCCCCCCCcCCCCC
Confidence            99999999999999984           35799999999976

>d1jy5a_ d.124.1.1 (A:) RNase-related protein {Hedge bindweed (Calystegia sepium) [TaxId: 47519]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase-related protein
species: Hedge bindweed (Calystegia sepium) [TaxId: 47519]

Probab=100.00  E-value=3.6e-35  Score=224.81  Aligned_cols=109  Identities=51%  Similarity=1.040  Sum_probs=102.7

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecCCCcce
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNE   80 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~~~L~E   80 (141)
                      |+|||+|||||++.++.++.+||++|++|++++|++++|+.+||+|+....|++++|++||++.+|..|.|.|++++|.|
T Consensus        97 w~hEW~KHGTC~~~~~~~~~~YF~~al~l~~~~n~~~~L~~~~i~P~~~~~y~~~~i~~a~~~~~g~~~~l~C~~~~L~E  176 (207)
T d1jy5a_          97 LAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSAIQSALRVTPVVKCKSDAVEQ  176 (207)
T ss_dssp             HHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHSCHHHHHHTTTCCCCSSCCEEHHHHHHHHHHHHSSCCEEEEETTEEEE
T ss_pred             HHHHhhhCccccCCCcCCHHHHHHHHHHHHHhcChHHHHHHcCCCCCCcccccHHHHHHHHHHhcCCCcEEEeCCCcEEE
Confidence            47999999999987777999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             EEEEEeCCCceecCCCCCCCCCCCCCCCCCCCCceeecC
Q 032417           81 LHLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPV  119 (141)
Q Consensus        81 V~iC~~~~~~~~~Cp~~~~~~~~~~~~~~~Cp~~i~~p~  119 (141)
                      |+||||+++++++||..          .+.||+.|.||+
T Consensus       177 i~iC~~~~~~~~~Cp~~----------~~~Cp~~i~~P~  205 (207)
T d1jy5a_         177 VQICFDKTLQLQECPST----------ASTCPSLVSLPI  205 (207)
T ss_dssp             EEEEECTTSCEECCCCC----------CCCSCSEEBCCC
T ss_pred             EEEEECCCCcEEcCCCC----------CCCCCCceEcCC
Confidence            99999999999999853          458999999986

>d1iyba_ d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxId: 35889]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase NW
species: Nicotiana glutinosa [TaxId: 35889]

Probab=100.00  E-value=2.4e-33  Score=215.06  Aligned_cols=109  Identities=29%  Similarity=0.578  Sum_probs=98.8

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecCC----
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKD----   76 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~~----   76 (141)
                      |+|||+|||||++.+ .++.+||++|++|++++|++++|+++||+|+ +++|++++|++||++++|..|.|+|.++    
T Consensus        94 w~hEW~KHGtC~~~~-~~~~~YF~~al~L~~~~n~~~~L~~~~i~p~-~~~y~~~~i~~al~~~~g~~~~l~C~~~~~~~  171 (208)
T d1iyba_          94 WSHEWEKHGTCAENV-FDQHGYFKKALDLKNQINLLEILQGAGIHPD-GGFYSLNSIKNAIRSAIGYAPGIECNVDESGN  171 (208)
T ss_dssp             HHHHHHHTGGGGTTT-CCHHHHHHHHHHHHHHCCHHHHHHHTTCCSS-SCEEEHHHHHHHHHHHHSSCCEEEEEECTTCC
T ss_pred             HHHhcccceeccCcc-CCHHHHHHHHHHHHHHcccHHHHHhcccCCC-CceeeHHHHHHHHHHhhCCCccEEEEEcCCCC
Confidence            479999999999865 4899999999999999999999999999996 6789999999999999999999999742    


Q ss_pred             -CcceEEEEEeCC-CceecCCCCCCCCCCCCCCCCCCCCceeecCC
Q 032417           77 -AVNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCPKYVSLPVY  120 (141)
Q Consensus        77 -~L~EV~iC~~~~-~~~~~Cp~~~~~~~~~~~~~~~Cp~~i~~p~~  120 (141)
                       +|.||+||||++ .++++||..         .+++||+.|.||+|
T Consensus       172 ~~L~Ei~iC~~~~~~~~~~Cp~~---------~~~~C~~~i~~P~f  208 (208)
T d1iyba_         172 SQLYQIYICVDGSGSNLIECPIF---------PRGKCGSSIEFPTF  208 (208)
T ss_dssp             EEEEEEEEEEETTSSSBCCCSCC---------CCCCCCSEEECCCC
T ss_pred             EEEEEEEEEEeCCcCceeECCCC---------CCCCCCCceEcCCC
Confidence             699999999998 468999853         45789999999997

>d1ucda_ d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Momordica charantia) [TaxId: 3673]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease MC1
species: Bitter gourd (Momordica charantia) [TaxId: 3673]

Probab=99.97  E-value=2.2e-32  Score=207.19  Aligned_cols=103  Identities=23%  Similarity=0.448  Sum_probs=93.4

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecCC----
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKD----   76 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~~----   76 (141)
                      |+|||+|||||+... .++.+||++|++|++++|+.++|+++||+|+ +++|++++|++||++++|..|.|+|.++    
T Consensus        81 w~hEW~KHGtC~~~~-~~~~~YF~~al~l~~~~n~~~~L~~~gI~P~-~~~y~~~~I~~al~~~~g~~p~l~C~~~~~~~  158 (190)
T d1ucda_          81 WSHEWTKHGTCSEST-FNQAAYFKLAVDMRNNYDIIGALRPHAAGPN-GRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTK  158 (190)
T ss_dssp             HHHHHHHTGGGGTTT-CCHHHHHHHHHHHHHTCCHHHHHGGGTCSCS-SSEEEHHHHHHHHHHHHSSCCEEEEEECTTTC
T ss_pred             HHHHHHhCccccccc-CCHHHHHHHHHHHHHhCCHHHHHHHcCCCCC-cccccHHHHHHHHHHhhCCCceEEEEECCCCC
Confidence            479999999999765 3899999999999999999999999999996 6799999999999999999999999652    


Q ss_pred             --CcceEEEEEeCCCc-eecCCCCCCCCCCCCCCCCCCCCceee
Q 032417           77 --AVNELHLCFYKDFK-PRDCIIERSPENDNYFSSSSCPKYVSL  117 (141)
Q Consensus        77 --~L~EV~iC~~~~~~-~~~Cp~~~~~~~~~~~~~~~Cp~~i~~  117 (141)
                        +|.||+||||++++ +++||.            ++||+.|+|
T Consensus       159 ~~~L~Ev~iC~~k~~~~~idCp~------------~~C~~~~~f  190 (190)
T d1ucda_         159 VSYLVQVVACFAQDGSTLIDCTR------------DTCGANFIF  190 (190)
T ss_dssp             CEEEEEEEEEEETTSSSEECCCC------------CCCCSEEEC
T ss_pred             cEEEEEEEEEECCCCCccccCCC------------CCCCCCcCC
Confidence              69999999999985 899984            479999876

>d1iooa_ d.124.1.1 (A:) Gemetophytic self-incompatibility associated SF11-RNase {Winged tobacco (Nicotiana alata) [TaxId: 4087]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Gemetophytic self-incompatibility associated SF11-RNase
species: Winged tobacco (Nicotiana alata) [TaxId: 4087]

Probab=99.97  E-value=7.8e-32  Score=205.01  Aligned_cols=93  Identities=25%  Similarity=0.533  Sum_probs=85.9

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCceEEecCC----
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKD----   76 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~l~C~~~----   76 (141)
                      |+|||+|||||++.++ ++.+||++|++|++++|+.++|+++||+|+  .+|++++|.+||+.++|..|.|+|.++    
T Consensus        84 W~hEW~KHGTCa~~~~-~~~~YF~~al~l~~~~ni~~~L~~~gI~P~--~ty~~~~I~~Ai~~~~g~~p~l~C~~~~~g~  160 (196)
T d1iooa_          84 WKYQYIKHGSCCQKRY-NQNTYFGLALRLKDKFDLLRTLQTHRIIPG--SSYTFQDIFDAIKTVSQENPDIKCAEVTKGT  160 (196)
T ss_dssp             HHHHHHHTGGGCTTTC-CHHHHHHHHHHHHHTCCHHHHHHHTTCCTT--EEECHHHHHHHHHHHHSSCCEEEEECSSTTC
T ss_pred             HHhhhhhccccccccC-CHHHHHHHHHHHHHHcCHHHHHHhCcccCC--CcCcHHHHHHHHHHHHCCCcEEEEeeCCCCC
Confidence            5799999999998764 899999999999999999999999999996  479999999999999999999999753    


Q ss_pred             -CcceEEEEEeCCCc-eecCCC
Q 032417           77 -AVNELHLCFYKDFK-PRDCII   96 (141)
Q Consensus        77 -~L~EV~iC~~~~~~-~~~Cp~   96 (141)
                       +|.||+||||++++ +||||.
T Consensus       161 ~~L~Ei~iC~~k~~~~~idCp~  182 (196)
T d1iooa_         161 PELYEIGICFTPNADSMFRCPQ  182 (196)
T ss_dssp             CEEEEEEEEECTTSSSEECCCC
T ss_pred             eEEEEEEEEEECCCCeeeCCCC
Confidence             59999999999985 799995

>d1bola_ d.124.1.1 (A:) Ribonuclease Rh {Rhizopus niveus [TaxId: 4844]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease Rh
species: Rhizopus niveus [TaxId: 4844]

Probab=99.97  E-value=1e-31  Score=207.78  Aligned_cols=108  Identities=31%  Similarity=0.517  Sum_probs=95.7

Q ss_pred             CcchhccccccCCCC----------CCCHHHHHHHHHHhhhhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCce
Q 032417            1 MHWQWEKHGTCSFPV----------VRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPK   70 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~----------~~~~~~YF~~a~~L~~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p~   70 (141)
                      |+|||+|||||+...          +.++.+||.+|++|++++|+.++|+.+||+|+  .+|++++|++||++.+|..|.
T Consensus       102 w~hEW~KHGTCa~~~~~~~~~~~~~~~~~~~YF~~al~L~~~~n~~~~L~~~gI~P~--~~y~~~~i~~al~~~~g~~~~  179 (222)
T d1bola_         102 WSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITPG--GTYTATEMQSAIESYFGAKAK  179 (222)
T ss_dssp             HHHHHHHTGGGCGGGSGGGCTTCCTTHHHHHHHHHHHHHHHHSCHHHHHHTTTCCSS--EEEEHHHHHHHHHHHHSSCCE
T ss_pred             HHHHHHhcccccccCccccccccccccCHHHHHHHHHHHHHHcccHHHHHhCCcCCC--CcCcHHHHHHHHHHhhCCCcE
Confidence            579999999998532          35899999999999999999999999999996  579999999999999999999


Q ss_pred             EEecCCCcceEEEEEeCCCc--eecCCCCCCCCCCCCCCCCCCCCceeecC
Q 032417           71 LDCSKDAVNELHLCFYKDFK--PRDCIIERSPENDNYFSSSSCPKYVSLPV  119 (141)
Q Consensus        71 l~C~~~~L~EV~iC~~~~~~--~~~Cp~~~~~~~~~~~~~~~Cp~~i~~p~  119 (141)
                      |.|++++|.||+||||++++  ++.|+..         ..++||+.|.||+
T Consensus       180 l~C~~~~L~Ev~iC~~~~~~~~~~~~~~~---------~~~~C~~~i~~Pp  221 (222)
T d1bola_         180 IDCSSGTLSDVALYFYVRGRDTYVITDAL---------STGSCSGDVEYPT  221 (222)
T ss_dssp             EEEETTEEEEEEEEEEEETTTEEEEECCS---------CCCSCCSEEEECC
T ss_pred             EEecCCeEeEEEEEEEcCCccceeeCCCC---------CCCCCCCCeEeCC
Confidence            99999999999999999875  4555532         3568999999997

>d1iqqa_ d.124.1.1 (A:) S3-RNase {Japanese pear (Pyrus pyrifolia) [TaxId: 3767]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: S3-RNase
species: Japanese pear (Pyrus pyrifolia) [TaxId: 3767]

Probab=99.97  E-value=5.6e-31  Score=200.81  Aligned_cols=111  Identities=34%  Similarity=0.604  Sum_probs=95.3

Q ss_pred             CcchhccccccCCCCCCCHHHHHHHHHHhh--hhcchhHHHHhcCCCCCCCcccchHHHHHHHHHHh-CCCceEEecCC-
Q 032417            1 MHWQWEKHGTCSFPVVRDEYSYFSTTLNLY--FKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF-HATPKLDCSKD-   76 (141)
Q Consensus         1 ~~hEW~KHGTCs~~~~~~~~~YF~~a~~L~--~k~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~-g~~p~l~C~~~-   76 (141)
                      |+|||+|||||+...+.++.+||++|++|+  +++|+.++|+++||+|+ ++.|++++|++||++++ |..|.|+|.++ 
T Consensus        81 w~hEW~KHGTC~~~~~~~~~~YF~~al~L~~~~~~n~~~~L~~~gI~P~-~~~~~~~~i~~ai~~~~~g~~p~l~C~~~~  159 (200)
T d1iqqa_          81 WDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPD-GKKRALLDIENAIRNGADNKKPKLKCQKKG  159 (200)
T ss_dssp             HHHHHHHTGGGSTTTSCSHHHHHHHHHHHHTTTCCCHHHHHHHTTCCSS-CCEECHHHHHHHHHTTTTTCCCEEEEEEET
T ss_pred             hHHHHhhCccccCcCcCCHHHHHHHHHHHHHHhhCCHHHHHHHcCCCCC-CCeeeHHHHHHHHHHHhcCCCcEEEeCCCC
Confidence            479999999999866679999999999996  89999999999999996 56899999999999865 88999999864 


Q ss_pred             ---CcceEEEEEeCCC-ceecCCCCCCCCCCCCCCCCCCCCc-eee
Q 032417           77 ---AVNELHLCFYKDF-KPRDCIIERSPENDNYFSSSSCPKY-VSL  117 (141)
Q Consensus        77 ---~L~EV~iC~~~~~-~~~~Cp~~~~~~~~~~~~~~~Cp~~-i~~  117 (141)
                         +|.||+||||+++ .+++||.+-.    + ...+.||.. |.|
T Consensus       160 ~~~~L~EI~iC~~~~~~~~~dCp~p~~----~-~~~~~CP~~~i~~  200 (200)
T d1iqqa_         160 TTTELVEITLCSDKSGEHFIDCPHPFE----P-ISPHYCPTNNIKY  200 (200)
T ss_dssp             TEEEEEEEEEEECTTSSSEECCSCCCC----T-TSTTCCCSSCEEC
T ss_pred             CceEEEEEEEEEeCCCCccCCCCCCCC----C-CCCCCCCcCCCcC
Confidence               6999999999998 4899996511    1 356899976 654

>d2ciwa1 a.39.3.1 (A:0-119) Cloroperoxidase {Fungus (Caldariomyces fumago) [TaxId: 5474]}

class: All alpha proteins
fold: EF Hand-like
superfamily: Cloroperoxidase
family: Cloroperoxidase
domain: Cloroperoxidase
species: Fungus (Caldariomyces fumago) [TaxId: 5474]

Probab=92.30  E-value=0.037  Score=37.32  Aligned_cols=37  Identities=16%  Similarity=0.263  Sum_probs=32.8

Q ss_pred             cchhHHHHhcCCCCCCCcccchHHHHHHHHHHhCCCc
Q 032417           33 YNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATP   69 (141)
Q Consensus        33 ~ni~~~L~~~gI~Ps~~~~~t~~~I~~ai~~~~g~~p   69 (141)
                      ....++|++.|+.|.+++.++.+++..++.+.++..+
T Consensus        30 CPgLNaLANHGyLPrdG~nIt~~~l~~a~~~~~n~~~   66 (120)
T d2ciwa1          30 CPALNALANHGYIPHDGRAISRETLQNAFLNHMGIAN   66 (120)
T ss_dssp             CHHHHHHHHTTSSCTTCEEECHHHHHHHHHHHHCBCH
T ss_pred             ChhhHHHHhcCccCCCCcccCHHHHHHHHHHHhCccH
Confidence            3456889999999999999999999999999998754