Citrus Sinensis ID: 032562

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFWLLWTVGRDKH
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MEDLLGWFLVFIFLISLLGILSYQLQLMYLTdlegdyinpydsaAQINMlvfpefftqGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFWLLWTVGRDKH
Flexible Loop (DISEMBL)
MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFWLLWTVGRDKH
Low Complexity Region (SEG)
MEDLLGWflvfiflisllgilSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHlrlyklcyliillvlciFWLLWTVGRDKH
Disordered region (IsUnstruct)
***LLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFWLLWTVG****
Disordered Region (DISOPRED)
*EDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFWLLWTVGR***
Disordered Region (DISEMBL)
MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFWLLWTVGRDKH
Disordered Region (DISPRO)
MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFWLLWTVGRD**
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooo
Transmembrane Helix (MEMSAT)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFWLLWTVGRDKH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	138	2.2.26 [Sep-21-2011]
Q84W04	137	Protein cornichon homolog	yes	no	0.971	0.978	0.566	3e-38
Q3EDD7	129	Probable protein cornicho	no	no	0.804	0.860	0.585	3e-33
Q8GWT5	137	Protein cornichon homolog	no	no	0.804	0.810	0.585	2e-32
Q9SZ74	135	Protein cornichon homolog	no	no	0.971	0.992	0.463	9e-31
Q9C7D7	146	Protein cornichon homolog	no	no	0.905	0.856	0.425	4e-24
P53173	138	ER-derived vesicles prote	yes	no	0.630	0.630	0.402	7e-13
P38312	142	ER-derived vesicles prote	no	no	0.557	0.542	0.389	2e-10
Q3T126	139	Protein cornichon homolog	yes	no	0.594	0.589	0.348	9e-09
Q5R9M4	139	Protein cornichon homolog	yes	no	0.594	0.589	0.337	2e-08
Q9P003	139	Protein cornichon homolog	yes	no	0.594	0.589	0.337	2e-08

>sp|Q84W04|CNIH4_ARATH Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390 PE=1 SV=1

 Score =  156 bits (395), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/136 (56%), Positives = 102/136 (75%), Gaps = 2/136 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           M D+  W + F FLI+L+GI+ YQL  + L DLE DYINPYDSA++IN +V PEF  QG 
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQL--VCLADLEFDYINPYDSASRINSVVLPEFIVQGV 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
           LC+ +L+T HWFM LL LPYLY+N  LY++RQHLVDVTEI++ L WEK  RL+KL Y+++
Sbjct: 59  LCVFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVL 118

Query: 121 LLVLCIFWLLWTVGRD 136
            L L IFW++++   D
Sbjct: 119 NLFLTIFWMIYSALDD 134

Arabidopsis thaliana (taxid: 3702)

>sp|Q3EDD7|CNIH2_ARATH Probable protein cornichon homolog 2 OS=Arabidopsis thaliana GN=At1g12340 PE=2 SV=2

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 85/111 (76%)

Query: 26  QLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNV 85
            L+ L DLE DYINPYDSA++IN +V PEF  QG LC+ +L+T HWFM LL LPYLY+N 
Sbjct: 16  HLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNF 75

Query: 86  RLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFWLLWTVGRD 136
            LY++RQHLVDVTEI++ L WEK  RL+KL Y+++ L L IFW++++   D
Sbjct: 76  HLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDD 126

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GWT5|CNIH3_ARATH Protein cornichon homolog 3 OS=Arabidopsis thaliana GN=At1g62880 PE=2 SV=1

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 85/111 (76%)

Query: 26  QLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNV 85
           QL+ L DLE DYINPYDSA++IN +V PE   QG LC+ +L+T HWFM LL +PYLY+N 
Sbjct: 24  QLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNF 83

Query: 86  RLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFWLLWTVGRD 136
            LY+R+QHL+DVTEI++ L WEK  RL+KL Y+I+ L L IFWL+++   D
Sbjct: 84  HLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFWLIYSTLDD 134

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SZ74|CNIH5_ARATH Protein cornichon homolog 5 OS=Arabidopsis thaliana GN=At4g12090 PE=2 SV=2

 Score =  132 bits (331), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 96/136 (70%), Gaps = 2/136 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           M DLL W + F+FL +L+ I+ YQL    L DLE D INPYD +++IN +V PEF  QG 
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTC--LADLEFDRINPYDVSSRINRMVLPEFGLQGL 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
           LC+ +++T HWFM +LSLP+L++N+RLY +R+HL DVTE+Y+   WE+  R+YK+ ++ +
Sbjct: 59  LCLYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIAL 118

Query: 121 LLVLCIFWLLWTVGRD 136
            + +  +WL+ +   D
Sbjct: 119 SIFITTYWLIHSALGD 134

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C7D7|CNIH1_ARATH Protein cornichon homolog 1 OS=Arabidopsis thaliana GN=At3g12180 PE=2 SV=1

 Score =  110 bits (274), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 86/127 (67%), Gaps = 2/127 (1%)

Query: 3   DLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLC 62
           DL  W  +  F +SL  + S   Q++ LTDLE DY+NP++++ +IN LV PEF  QG+LC
Sbjct: 4   DLFLW--IVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLC 61

Query: 63  ILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILL 122
           +LFL+T HW  FL+++P   ++  LY  R++L+DVTE++  +++EK LR  KL + + L 
Sbjct: 62  LLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLF 121

Query: 123 VLCIFWL 129
           ++ +F L
Sbjct: 122 IMVVFRL 128

Arabidopsis thaliana (taxid: 3702)

>sp|P53173|ERV14_YEAST ER-derived vesicles protein ERV14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV14 PE=1 SV=3

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 51/87 (58%)

Query: 31  TDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTR 90
            DLE DYINP +  +++N L+ PE    G L +LFL+  +WF+FLL+LP L +N+     
Sbjct: 28  ADLEADYINPIELCSKVNKLITPEAALHGALSLLFLLNGYWFVFLLNLPVLAYNLNKIYN 87

Query: 91  RQHLVDVTEIYSQLTWEKHLRLYKLCY 117
           +  L+D TEI+  L   K     KL +
Sbjct: 88  KVQLLDATEIFRTLGKHKRESFLKLGF 114

Could regulate export of the bud site and axial growth sites selection protein AXL2 and possibly other secretory proteins from the endoplasmic reticulum in COPII-coated vesicles. Seems to be required for axial budding pattern in haploid cells.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P38312|ERV15_YEAST ER-derived vesicles protein ERV15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV15 PE=1 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%)

Query: 32  DLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRR 91
           DLE DYIN  +   ++N L  PE   Q  +  LFL   +WF+FLL++P L +N     ++
Sbjct: 32  DLEADYINSIELCKRVNRLSVPEAILQAFISALFLFNGYWFVFLLNVPVLAYNASKVYKK 91

Query: 92  QHLVDVTEIYSQLTWEK 108
            HL+D T+I+ +L   K
Sbjct: 92  THLLDATDIFRKLGRCK 108

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q3T126|CNIH4_BOVIN Protein cornichon homolog 4 OS=Bos taurus GN=CNIH4 PE=2 SV=1

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 4/86 (4%)

Query: 30  LTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLY- 88
           L+DLE DYIN     +++N  V PE      + +L LI+ HWF+FLL+LP   +N+  Y 
Sbjct: 27  LSDLECDYINARSCCSKLNKWVIPELVGHTLVTVLMLISLHWFIFLLNLPVAAWNIYRYI 86

Query: 89  ---TRRQHLVDVTEIYSQLTWEKHLR 111
              +    + D TEI+++   + H++
Sbjct: 87  MVPSGNMGVFDPTEIHNRGQLKSHMK 112

Bos taurus (taxid: 9913)

>sp|Q5R9M4|CNIH4_PONAB Protein cornichon homolog 4 OS=Pongo abelii GN=CNIH4 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 4/86 (4%)

Query: 30  LTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLY- 88
           L+DLE DYIN     +++N  V PE      + +L L++ HWF+FLL+LP   +N+  Y 
Sbjct: 27  LSDLECDYINARSCCSKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIYRYI 86

Query: 89  ---TRRQHLVDVTEIYSQLTWEKHLR 111
              +    + D TEI+++   + H++
Sbjct: 87  MVPSGNMGVFDPTEIHNRGQLKSHMK 112

Pongo abelii (taxid: 9601)

>sp|Q9P003|CNIH4_HUMAN Protein cornichon homolog 4 OS=Homo sapiens GN=CNIH4 PE=1 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 4/86 (4%)

Query: 30  LTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLY- 88
           L+DLE DYIN     +++N  V PE      + +L L++ HWF+FLL+LP   +N+  Y 
Sbjct: 27  LSDLECDYINARSCCSKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIYRYI 86

Query: 89  ---TRRQHLVDVTEIYSQLTWEKHLR 111
              +    + D TEI+++   + H++
Sbjct: 87  MVPSGNMGVFDPTEIHNRGQLKSHMK 112

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
225453913	134	PREDICTED: protein cornichon homolog 4 [	0.956	0.985	0.597	3e-40
224125076	138	predicted protein [Populus trichocarpa]	0.978	0.978	0.583	2e-37
449460435	136	PREDICTED: probable protein cornichon ho	0.985	1.0	0.572	8e-37
225470289	138	PREDICTED: protein cornichon homolog 4 [	0.971	0.971	0.595	2e-36
30682747	137	protein cornichon-4 [Arabidopsis thalian	0.971	0.978	0.566	2e-36
297844102	137	cornichon family protein [Arabidopsis ly	0.971	0.978	0.558	3e-36
449459670	137	PREDICTED: protein cornichon homolog 4-l	0.971	0.978	0.566	5e-36
351726946	136	uncharacterized protein LOC100306239 [Gl	0.985	1.0	0.536	1e-35
147828483	149	hypothetical protein VITISV_027918 [Viti	0.905	0.838	0.622	9e-35
356532099	136	PREDICTED: protein cornichon homolog 4-l	0.985	1.0	0.536	3e-34

>gi|225453913|ref|XP_002279334.1| PREDICTED: protein cornichon homolog 4 [Vitis vinifera] gi|296089153|emb|CBI38856.3| unnamed protein product [Vitis vinifera]

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 80/134 (59%), Positives = 106/134 (79%), Gaps = 2/134 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           M DL+ W L F F  SL+G++ YQL  M L DLE DY+NPYDS+++IN ++ PEF  QG 
Sbjct: 1   MGDLMSWLLSFFFHGSLVGLIGYQL--MCLADLEFDYMNPYDSSSRINRVILPEFIIQGV 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
           LC++ L+T HWFMFL+SLPYLY+NVRLY RRQHL+DVTEI++QL  EK LR++KL +LI+
Sbjct: 59  LCLIHLVTGHWFMFLVSLPYLYYNVRLYMRRQHLLDVTEIFNQLNREKQLRIFKLVHLIV 118

Query: 121 LLVLCIFWLLWTVG 134
           LL   IFW++W++G
Sbjct: 119 LLTTSIFWMIWSIG 132

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125076|ref|XP_002329887.1| predicted protein [Populus trichocarpa] gi|222871124|gb|EEF08255.1| predicted protein [Populus trichocarpa]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/137 (58%), Positives = 103/137 (75%), Gaps = 2/137 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           M DL  W + F  LI+LL I+ +QL  M L DLE DYINPYDS+++IN ++ PE+ T+G 
Sbjct: 1   MGDLFVWLIAFFILIALLVIVIFQL--MALADLEFDYINPYDSSSRINKVILPEYITEGV 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
           LC+ FLIT HW M LL +PYLY+NVRLYT+RQHLVDVTEI++ L WEK  RL+KL YL++
Sbjct: 59  LCLFFLITGHWCMSLLCIPYLYYNVRLYTQRQHLVDVTEIFNMLNWEKKQRLFKLGYLVV 118

Query: 121 LLVLCIFWLLWTVGRDK 137
           LL L IFW+++T   D 
Sbjct: 119 LLFLSIFWMIFTALEDS 135

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460435|ref|XP_004147951.1| PREDICTED: probable protein cornichon homolog 2-like isoform 1 [Cucumis sativus] gi|449494293|ref|XP_004159504.1| PREDICTED: probable protein cornichon homolog 2-like isoform 1 [Cucumis sativus]

 Score =  158 bits (399), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 79/138 (57%), Positives = 101/138 (73%), Gaps = 2/138 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           MEDL  W + F FLI+LL +L YQL  M L DLE DYINP+DSA++IN ++ PEF   G 
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQL--MCLADLEFDYINPFDSASRINKVIMPEFIVMGV 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
           LC+ +L+T HW M LLS PY+Y+NVRLY RRQHL+DVTEI++ L WEK  RL+KL YL++
Sbjct: 59  LCLFYLLTGHWGMSLLSGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVV 118

Query: 121 LLVLCIFWLLWTVGRDKH 138
           LL L IFW+++    D  
Sbjct: 119 LLFLSIFWMIYHALEDDE 136

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470289|ref|XP_002266561.1| PREDICTED: protein cornichon homolog 4 [Vitis vinifera] gi|297742670|emb|CBI34819.3| unnamed protein product [Vitis vinifera]

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/136 (59%), Positives = 98/136 (72%), Gaps = 2/136 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           M DL  W   F  LI+LL ++ YQL  M L DLE DYINPYDSA++IN +V PEF TQG 
Sbjct: 1   MGDLFAWIFSFFILIALLVLVVYQL--MCLADLEFDYINPYDSASRINKVVLPEFITQGV 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
           LC+ + +T HWFM LL  PYLY+NVRLY RRQHL+DVTEI++ L WEK  RL+KL YLI 
Sbjct: 59  LCLFYSLTGHWFMSLLCGPYLYYNVRLYQRRQHLIDVTEIFNLLNWEKKQRLFKLGYLIF 118

Query: 121 LLVLCIFWLLWTVGRD 136
           LL L IFW++ +   D
Sbjct: 119 LLFLSIFWMILSALED 134

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30682747|ref|NP_172701.2| protein cornichon-4 [Arabidopsis thaliana] gi|75148636|sp|Q84W04.1|CNIH4_ARATH RecName: Full=Protein cornichon homolog 4 gi|28416577|gb|AAO42819.1| At1g12390 [Arabidopsis thaliana] gi|110743211|dbj|BAE99496.1| hypothetical protein [Arabidopsis thaliana] gi|332190753|gb|AEE28874.1| protein cornichon-4 [Arabidopsis thaliana]

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/136 (56%), Positives = 102/136 (75%), Gaps = 2/136 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           M D+  W + F FLI+L+GI+ YQL  + L DLE DYINPYDSA++IN +V PEF  QG 
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQL--VCLADLEFDYINPYDSASRINSVVLPEFIVQGV 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
           LC+ +L+T HWFM LL LPYLY+N  LY++RQHLVDVTEI++ L WEK  RL+KL Y+++
Sbjct: 59  LCVFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVL 118

Query: 121 LLVLCIFWLLWTVGRD 136
            L L IFW++++   D
Sbjct: 119 NLFLTIFWMIYSALDD 134

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297844102|ref|XP_002889932.1| cornichon family protein [Arabidopsis lyrata subsp. lyrata] gi|297335774|gb|EFH66191.1| cornichon family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/136 (55%), Positives = 102/136 (75%), Gaps = 2/136 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           M D+  W + F FLI+L+GI+ YQL  + L DLE DYINPYDSA++IN +V PEF  QG 
Sbjct: 1   MGDIWAWLISFFFLIALVGIIVYQL--VCLADLEFDYINPYDSASRINSVVLPEFIVQGV 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
           LC+ +L+T HW M LL LPYLY+N +LY++RQHLVDVTEI++ L WEK  RL+KL Y+++
Sbjct: 59  LCVFYLLTGHWVMTLLCLPYLYYNFQLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVL 118

Query: 121 LLVLCIFWLLWTVGRD 136
            L L IFW++++   D
Sbjct: 119 NLFLTIFWMIYSALDD 134

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459670|ref|XP_004147569.1| PREDICTED: protein cornichon homolog 4-like [Cucumis sativus] gi|449523575|ref|XP_004168799.1| PREDICTED: protein cornichon homolog 4-like [Cucumis sativus]

 Score =  155 bits (392), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 77/136 (56%), Positives = 103/136 (75%), Gaps = 2/136 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           M D+  W L F F+I+LL ++ +QL  M L DLE DYINPYDS+++IN +V PEF TQG 
Sbjct: 1   MADIYVWLLSFFFIIALLMLVVFQL--MCLADLEFDYINPYDSSSRINKVVVPEFITQGV 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
           LCI +L++ HW M LL +P LY+N+R+YT+R+HLVDVTEI++QL WEK  RL+KL YL+ 
Sbjct: 59  LCIFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVS 118

Query: 121 LLVLCIFWLLWTVGRD 136
           LL L IFWL+++   D
Sbjct: 119 LLFLSIFWLIYSALED 134

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726946|ref|NP_001235864.1| uncharacterized protein LOC100306239 [Glycine max] gi|255627977|gb|ACU14333.1| unknown [Glycine max]

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/138 (53%), Positives = 98/138 (71%), Gaps = 2/138 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           M ++L W   F+ +++LL IL YQL L  L DLE DYINPYDS +QIN +V PEF   G 
Sbjct: 1   MAEVLYWISTFVLILTLLCILGYQLIL--LVDLEFDYINPYDSTSQINQVVLPEFIIHGI 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
            C   LI  HWF+FL+SLP+LY+N+RLY +R+HL DVTEIY++L WEK  RL+K+ YL++
Sbjct: 59  FCFTNLIAGHWFIFLISLPFLYYNLRLYIKREHLADVTEIYNKLNWEKKKRLFKVAYLVL 118

Query: 121 LLVLCIFWLLWTVGRDKH 138
           +   CI  L+WT+  D H
Sbjct: 119 VFAFCIVSLVWTLTEDVH 136

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147828483|emb|CAN64319.1| hypothetical protein VITISV_027918 [Vitis vinifera]

 Score =  151 bits (381), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/127 (62%), Positives = 93/127 (73%), Gaps = 2/127 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           M DL  W   F  LI+LL ++ YQL  M L DLE DYINPYDSA++IN +V PEF TQG 
Sbjct: 1   MGDLFAWIFSFFILIALLVLVVYQL--MCLADLEFDYINPYDSASRINKVVLPEFITQGV 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
           LC+ + +T HWFM LL  PYLY+NVRLY RRQHL+DVTEI++ L WEK  RL+KL YLI 
Sbjct: 59  LCLFYSLTGHWFMSLLCGPYLYYNVRLYQRRQHLIDVTEIFNLLNWEKKQRLFKLGYLIF 118

Query: 121 LLVLCIF 127
           LL L IF
Sbjct: 119 LLFLSIF 125

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532099|ref|XP_003534611.1| PREDICTED: protein cornichon homolog 4-like [Glycine max]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/138 (53%), Positives = 98/138 (71%), Gaps = 2/138 (1%)

Query: 1   MEDLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
           M ++L W   F+ +++LL IL YQL L  L DLE DYINPYDS ++IN +V PEF   G 
Sbjct: 1   MAEVLYWISTFVLILTLLCILGYQLIL--LVDLEFDYINPYDSTSRINQVVLPEFIIHGI 58

Query: 61  LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLII 120
            C   LI  HWF+FLLSLP+LY+N+RLY +R+HL DVTEIY++L WEK  RL+K+ YL++
Sbjct: 59  FCFTNLIAGHWFIFLLSLPFLYYNLRLYIKREHLADVTEIYNKLYWEKKKRLFKVGYLVL 118

Query: 121 LLVLCIFWLLWTVGRDKH 138
           + V  I  L+WT+  D H
Sbjct: 119 VFVFSIVSLVWTLAEDVH 136

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
TAIR|locus:2034660	137	AT1G12390 [Arabidopsis thalian	0.775	0.781	0.532	1.2e-28
TAIR|locus:2034655	129	AT1G12340 "AT1G12340" [Arabido	0.768	0.821	0.528	3.9e-28
TAIR|locus:2015514	137	AT1G62880 "AT1G62880" [Arabido	0.775	0.781	0.514	1.7e-27
TAIR|locus:2118101	135	AT4G12090 "AT4G12090" [Arabido	0.927	0.948	0.415	5.9e-25
TAIR|locus:2082199	146	AT3G12180 "AT3G12180" [Arabido	0.753	0.712	0.415	6.3e-21
SGD|S000003022	138	ERV14 "COPII-coated vesicle pr	0.550	0.550	0.443	1.3e-13
UNIPROTKB|G4MYQ8	138	MGG_08132 "Uncharacterized pro	0.586	0.586	0.402	2.4e-12
ASPGD|ASPL0000028082	138	AN5195 [Emericella nidulans (t	0.586	0.586	0.414	5e-12
POMBASE|SPAC30C2.05	137	erv14 "cornichon family protei	0.557	0.562	0.397	6.4e-12
SGD|S000000414	142	ERV15 "Protein involved in exp	0.528	0.514	0.397	2.2e-11

TAIR|locus:2034660 AT1G12390 [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 57/107 (53%), Positives = 73/107 (68%)

Query:    26 QLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNV 85
             QL+ L DLE DYINPYDSA++IN +V PEF  QG LC+ +L+T HWFM LL LPYLY+N 
Sbjct:    24 QLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNF 83

Query:    86 RLYTRRQHLVDVTEIYSQLTWEKHXXXXXXXXXXXXXXXXXFWLLWT 132
              LY++RQHLVDVTEI++ L WEK                  FW++++
Sbjct:    84 HLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYS 130

GO:0016020 "membrane" evidence=IEA;ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2034655 AT1G12340 "AT1G12340" [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 56/106 (52%), Positives = 72/106 (67%)

Query:    27 LMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVR 86
             L+ L DLE DYINPYDSA++IN +V PEF  QG LC+ +L+T HWFM LL LPYLY+N  
Sbjct:    17 LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 76

Query:    87 LYTRRQHLVDVTEIYSQLTWEKHXXXXXXXXXXXXXXXXXFWLLWT 132
             LY++RQHLVDVTEI++ L WEK                  FW++++
Sbjct:    77 LYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYS 122

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

TAIR|locus:2015514 AT1G62880 "AT1G62880" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 55/107 (51%), Positives = 72/107 (67%)

Query:    26 QLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNV 85
             QL+ L DLE DYINPYDSA++IN +V PE   QG LC+ +L+T HWFM LL +PYLY+N 
Sbjct:    24 QLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNF 83

Query:    86 RLYTRRQHLVDVTEIYSQLTWEKHXXXXXXXXXXXXXXXXXFWLLWT 132
              LY+R+QHL+DVTEI++ L WEK                  FWL+++
Sbjct:    84 HLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFWLIYS 130

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

TAIR|locus:2118101 AT4G12090 "AT4G12090" [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 54/130 (41%), Positives = 74/130 (56%)

Query:     1 MEDLLGWXXXXXXXXXXXXXXSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGT 60
             M DLL W               YQL    L DLE D INPYD +++IN +V PEF  QG 
Sbjct:     1 MGDLLDWIISFLFLATLIIIVIYQLTC--LADLEFDRINPYDVSSRINRMVLPEFGLQGL 58

Query:    61 LCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHXXXXXXXXXXX 120
             LC+ +++T HWFM +LSLP+L++N+RLY +R+HL DVTE+Y+   WE+            
Sbjct:    59 LCLYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIAL 118

Query:   121 XXXXXXFWLL 130
                   +WL+
Sbjct:   119 SIFITTYWLI 128

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

TAIR|locus:2082199 AT3G12180 "AT3G12180" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 44/106 (41%), Positives = 68/106 (64%)

Query:     3 DLLGWXXXXXXXXXXXXXXSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLC 62
             DL  W               YQ+  + LTDLE DY+NP++++ +IN LV PEF  QG+LC
Sbjct:     4 DLFLWIVSFFVSLALVASVFYQV--ICLTDLEADYLNPFETSTRINRLVIPEFILQGSLC 61

Query:    63 ILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEK 108
             +LFL+T HW  FL+++P   ++  LY  R++L+DVTE++  +++EK
Sbjct:    62 LLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEK 107

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

SGD|S000003022 ERV14 "COPII-coated vesicle protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 35/79 (44%), Positives = 54/79 (68%)

Query:    27 LMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNV- 85
             ++Y  DLE DYINP +  +++N L+ PE    G L +LFL+  +WF+FLL+LP L +N+ 
Sbjct:    25 ILY-ADLEADYINPIELCSKVNKLITPEAALHGALSLLFLLNGYWFVFLLNLPVLAYNLN 83

Query:    86 RLYTRRQHLVDVTEIYSQL 104
             ++Y + Q L+D TEI+  L
Sbjct:    84 KIYNKVQ-LLDATEIFRTL 101

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA;ISM

GO:0030437 "ascospore formation" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

GO:0030134 "ER to Golgi transport vesicle" evidence=IDA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP;IPI

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0007120 "axial cellular bud site selection" evidence=IMP

UNIPROTKB|G4MYQ8 MGG_08132 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 33/82 (40%), Positives = 48/82 (58%)

Query:    27 LMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVR 86
             +MY +DLE DYINP D   ++N  + PE    G L  +FLI  +W   +L+LP L +N++
Sbjct:    27 IMY-SDLECDYINPIDLCNRLNTYIIPEAAVHGFLTFIFLINGYWLPLILNLPLLGWNIK 85

Query:    87 LYTRRQHLVDVTEIYSQLTWEK 108
                   HL+D TEI+ +L   K
Sbjct:    86 KIVDNAHLLDATEIFRKLNVHK 107

GO:0003674 "molecular_function" evidence=ND

ASPGD|ASPL0000028082 AN5195 [Emericella nidulans (taxid:162425)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 34/82 (41%), Positives = 46/82 (56%)

Query:    27 LMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVR 86
             +MY +DLE DYINP D   ++N  + PE      L  LF+I  +W    L+LP L FN +
Sbjct:    27 IMY-SDLECDYINPIDLCNRLNAYIIPEAGVHAFLTFLFVINGYWLAIALNLPLLAFNAK 85

Query:    87 LYTRRQHLVDVTEIYSQLTWEK 108
                  QHL+D TEI+ +L   K
Sbjct:    86 KIYDNQHLLDATEIFRKLNVHK 107

GO:0030437 "ascospore formation" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA

GO:0007120 "axial cellular bud site selection" evidence=IEA

GO:0030134 "ER to Golgi transport vesicle" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0035556 "intracellular signal transduction" evidence=IEA

POMBASE|SPAC30C2.05 erv14 "cornichon family protein Erv14 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 31/78 (39%), Positives = 48/78 (61%)

Query:    27 LMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVR 86
             +M+ +DLE DYINP D   ++N LV PE  +   + +L L+ + W +FL +LP L F+  
Sbjct:    28 IMF-SDLEMDYINPIDLCNKLNDLVMPEIISHTLVTLLLLLGKKWLLFLANLPLLVFHAN 86

Query:    87 LYTRRQHLVDVTEIYSQL 104
                 + H++D TEI+ QL
Sbjct:    87 QVIHKTHILDATEIFRQL 104

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0006886 "intracellular protein transport" evidence=IC

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016971 "flavin-linked sulfhydryl oxidase activity" evidence=ISS

GO:0030134 "ER to Golgi transport vesicle" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=IEA

SGD|S000000414 ERV15 "Protein involved in export of proteins from the endoplasmic reticulum" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 29/73 (39%), Positives = 44/73 (60%)

Query:    32 DLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRR 91
             DLE DYIN  +   ++N L  PE   Q  +  LFL   +WF+FLL++P L +N     ++
Sbjct:    32 DLEADYINSIELCKRVNRLSVPEAILQAFISALFLFNGYWFVFLLNVPVLAYNASKVYKK 91

Query:    92 QHLVDVTEIYSQL 104
              HL+D T+I+ +L
Sbjct:    92 THLLDATDIFRKL 104

GO:0003674 "molecular_function" evidence=ND

GO:0007120 "axial cellular bud site selection" evidence=ISS

GO:0030134 "ER to Golgi transport vesicle" evidence=IGI

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IGI

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0016020 "membrane" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84W04	CNIH4_ARATH	No assigned EC number	0.5661	0.9710	0.9781	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_1270006 hypothetical protein (138 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	138
pfam03311	128	pfam03311, Cornichon, Cornichon protein	1e-28
PLN00174	160	PLN00174, PLN00174, predicted protein; Provisional	2e-08

>gnl|CDD|217486 pfam03311, Cornichon, Cornichon protein

 Score =  101 bits (254), Expect = 1e-28
 Identities = 51/122 (41%), Positives = 76/122 (62%), Gaps = 2/122 (1%)

Query: 7   WFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFL 66
           + L  +   +LL +  Y + +  L+DLE DYINP D  +++N LV PE+   G LC+LFL
Sbjct: 9   YILALLINAALLFLQVYFVIM--LSDLEADYINPIDLCSRLNPLVLPEYILHGFLCLLFL 66

Query: 67  ITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCI 126
           +T HWF+FLL+LP L +NV LY +R HL+D TEI+  L+  K     KL + ++L    +
Sbjct: 67  LTGHWFVFLLNLPLLAYNVYLYYKRTHLLDATEIFRTLSKHKRESFIKLAFYLLLFFYYL 126

Query: 127 FW 128
           + 
Sbjct: 127 YR 128

Length = 128

>gnl|CDD|177769 PLN00174, PLN00174, predicted protein; Provisional

 Score = 50.1 bits (119), Expect = 2e-08
 Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 7/129 (5%)

Query: 5   LGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCIL 64
           +G    F+ +I  LG  +Y+L    L DL  D +NP +   ++N L  PE+     L I 
Sbjct: 17  MGLVSTFM-VIICLGY-TYKL----LQDLSTDTVNPVEVCDKVNQLKVPEYLAHLFLSIA 70

Query: 65  FLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVL 124
           F+I   W +  L+ P++++N   +   +H +D  +I++ L+ E  +   K  + II+++ 
Sbjct: 71  FVIRGWWIVGFLNFPFIFYNFAQWYEGKHQLDSAQIFNVLSRELRVIKAKSAFFIIIVIY 130

Query: 125 CIF-WLLWT 132
            I+ W++W 
Sbjct: 131 TIWEWMIWV 139

Length = 160

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	138
KOG2729	137	consensus ER vesicle integral membrane protein inv	100.0
PF03311	128	Cornichon: Cornichon protein; InterPro: IPR003377	100.0
PLN00174	160	predicted protein; Provisional	100.0

>KOG2729 consensus ER vesicle integral membrane protein involved in establishing cell polarity, signaling and protein degradation [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-57  Score=338.74  Aligned_cols=132  Identities=40%  Similarity=0.794  Sum_probs=128.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCHHHHHhhcCcchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 032562            3 DLLGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLY   82 (138)
Q Consensus         3 ~~~~wi~a~~~~~~ll~~~vy~~~~i~l~DLe~D~iNp~d~~~~lN~lv~pE~~~h~~l~~l~ll~g~w~~~lln~P~l~   82 (138)
                      +.+.|..+++.+++++++++||  +|+++|||+||+||+|+|||+|++|+||+++||++|++++++|||+++++|+|+++
T Consensus         6 ~~~~~~~~~l~~~~li~~~iy~--vI~~~DLe~DyiNPid~c~rlN~lVlPE~ilh~~KOGlfLl~g~W~~fllnlP~l~   83 (137)
T KOG2729|consen    6 AAFLYTLSLLVCAALIFLQIYF--VICLADLETDYINPIDLCSRLNRLVLPEFILHGLLCLLFLLTGHWFMFLLNLPLLA   83 (137)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhhccCCHHHHHHHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence            5667778899999999999999  99999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032562           83 FNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFWLLWTVGRD  136 (138)
Q Consensus        83 y~~~~y~~~~~l~D~TeIf~~L~~~~k~~~iKlafyll~Ff~~ly~mi~~lv~~  136 (138)
                      ||+++|.+|+|++|||||||++++|||||++|+|||+++||+|+||||+|++++
T Consensus        84 y~~~~y~~r~~l~D~TeI~n~L~~~~k~~~~KL~fyll~FF~yly~mI~slv~~  137 (137)
T KOG2729|consen   84 YNAWLYMKRPHLYDPTEIFNTLSSEKKERWIKLAFYLLSFFYYLYWMIYSLVSS  137 (137)
T ss_pred             HHHHHHHcCCcccCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999999999999975

>PF03311 Cornichon: Cornichon protein; InterPro: IPR003377 The drosophila cornichon protein (gene: cni) [] is required in the germline for dorsal-ventral signalling

Probab=100.00  E-value=2.3e-52  Score=309.67  Aligned_cols=126  Identities=44%  Similarity=0.853  Sum_probs=122.7

Q ss_pred             Ch-hH-HHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCHHHHHhhcCcchHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 032562            1 ME-DL-LGWFLVFIFLISLLGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSL   78 (138)
Q Consensus         1 m~-~~-~~wi~a~~~~~~ll~~~vy~~~~i~l~DLe~D~iNp~d~~~~lN~lv~pE~~~h~~l~~l~ll~g~w~~~lln~   78 (138)
                      |+ +. +.|++|++++++++++++||  ++++||||+||+||+|+|||+||+|.||+++|++++++++++|||+++++|+
T Consensus         1 m~~~~~~~~i~alll~~~ll~~~vy~--ii~l~DLe~D~iNp~d~c~~lN~lv~pE~~~h~~l~~l~ll~g~w~~~llnl   78 (128)
T PF03311_consen    1 MAFDFIVLWILALLLTAALLFIVVYF--IICLSDLECDYINPIDLCSRLNPLVLPEYIIHGFLCLLFLLTGHWFLFLLNL   78 (128)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55 44 48999999999999999999  9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 032562           79 PYLYFNVRLYTRRQHLVDVTEIYSQLTWEKHLRLYKLCYLIILLVLCIFW  128 (138)
Q Consensus        79 P~l~y~~~~y~~~~~l~D~TeIf~~L~~~~k~~~iKlafyll~Ff~~ly~  128 (138)
                      |+++||+++|.+|+|++|||||||+|+++||||++|+|||+++||+|+||
T Consensus        79 Pl~~y~~~~~~~~~~l~D~T~If~~L~~~kk~~~iKl~~yll~ff~yly~  128 (128)
T PF03311_consen   79 PLLAYHIYRYFRRQHLYDPTEIFNQLKREKKESFIKLGFYLLLFFYYLYR  128 (128)
T ss_pred             HHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999999996

The dorsal-ventral pattern formation involves a reorganisation of the microtubule network correlated with the movement of the oocyte nucleus, and depending on the initial correct establishment of the anterior-posterior axis via a signal from the oocyte produced by cornichon and gurken and received by torpedo protein in the follicle cells. The biochemical function of the cornichon protein is currently not known. It is a protein of 144 residues that seems to contain three transmembrane regions. ; GO: 0035556 intracellular signal transduction, 0016020 membrane

>PLN00174 predicted protein; Provisional

Probab=100.00  E-value=1.1e-48  Score=296.88  Aligned_cols=114  Identities=27%  Similarity=0.631  Sum_probs=109.8

Q ss_pred             HHHHHHHHHhhhhhhcccccCCHHHHHhhcCcchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCccch
Q 032562           18 LGILSYQLQLMYLTDLEGDYINPYDSAAQINMLVFPEFFTQGTLCILFLITEHWFMFLLSLPYLYFNVRLYTRRQHLVDV   97 (138)
Q Consensus        18 l~~~vy~~~~i~l~DLe~D~iNp~d~~~~lN~lv~pE~~~h~~l~~l~ll~g~w~~~lln~P~l~y~~~~y~~~~~l~D~   97 (138)
                      ..+..|.  ...+||||+||+||+|+|+|+|++|+||+++|+++|++++++|+|+++++|+|+++||++||.+|+|++||
T Consensus        26 ~~~~~~~--~~~lsDLE~DYiNPiD~CnrLN~lVlPEyiiH~~l~lLfLltG~W~~fLLNlPll~Yhv~~y~~r~hL~D~  103 (160)
T PLN00174         26 IICLGYT--YKLLQDLSTDTVNPVEVCDKVNQLKVPEYLAHLFLSIAFVIRGWWIVGFLNFPFIFYNFAQWYEGKHQLDS  103 (160)
T ss_pred             HHHhcch--HHHHHHhhhccCCHHHHHHHhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCH
Confidence            4555667  88899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHhhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHh
Q 032562           98 TEIYSQLTWEKHLRLYKLCYLIILLVLCIF-WLLWTV  133 (138)
Q Consensus        98 TeIf~~L~~~~k~~~iKlafyll~Ff~~ly-~mi~~l  133 (138)
                      |||||+|++|||||++|+|||+++||+|+| |||++.
T Consensus       104 TeIfn~L~~~kKe~~iKLaFYLl~FF~~ly~~mI~~~  140 (160)
T PLN00174        104 AQIFNVLSRELRVIKAKSAFFIIIVIYTIWEWMIWVP  140 (160)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999 999985

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00