Citrus Sinensis ID: 032667


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL
cEEccccccccccccEEEEccEEccccccccccccccEEEccccccccEEEEEEcccccEEccccccccccccccccEEEEEEcccccccccccccccccccccccHHHHcccccccEEccccccccccccccccc
EEEEEcccccccccEEEEEccEEEEccccHHHHHHccEEEEcccccccEEEEEccEEcccEcccccccccccccccccEEEEEccEcHHHccccccccccEEEcccHHHHHcccHHHHccHHHccHHHcccccccc
mhetqgradpnqntgiviqksrigatsdlkpvqgsfptylgrpwkeysRTVIMQssitdvihpagwhewdgnfalntlfygehqnagagagtsgrvkwKGFRVITsateaqaftpgsfiagsswlgstgfpfslgl
mhetqgradpnqntgiVIQKsrigatsdlkpvqgsfptylgrpwKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL
MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL
****************VI****IG***DLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFP*****
MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL
**********NQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL
MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS***
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
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MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query136 2.2.26 [Sep-21-2011]
P83948584 Pectinesterase 3 OS=Citru yes no 1.0 0.232 0.977 3e-76
O04886584 Pectinesterase 1 OS=Citru no no 1.0 0.232 0.955 9e-75
Q43143583 Pectinesterase/pectineste N/A no 1.0 0.233 0.845 4e-67
P83218319 Pectinesterase OS=Daucus N/A no 1.0 0.426 0.823 4e-63
O49006592 Pectinesterase/pectineste yes no 1.0 0.229 0.742 8e-57
Q42534587 Pectinesterase 2 OS=Arabi no no 1.0 0.231 0.727 5e-55
P83947545 Pectinesterase/pectineste N/A no 0.970 0.242 0.628 1e-45
O22149511 Probable pectinesterase/p no no 0.963 0.256 0.643 1e-45
O04887510 Pectinesterase 2 OS=Citru no no 0.970 0.258 0.575 1e-43
P14280546 Pectinesterase 1 OS=Solan N/A no 1.0 0.249 0.602 3e-43
>sp|P83948|PME3_CITSI Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1 Back     alignment and function desciption
 Score =  283 bits (723), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 133/136 (97%), Positives = 133/136 (97%)

Query: 1   MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDV 60
           M   QGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDV
Sbjct: 449 MVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDV 508

Query: 61  IHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIA 120
           IHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIA
Sbjct: 509 IHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIA 568

Query: 121 GSSWLGSTGFPFSLGL 136
           GSSWLGSTGFPFSLGL
Sbjct: 569 GSSWLGSTGFPFSLGL 584




Acts in the modification of cell walls via demethylesterification of cell wall pectin.
Citrus sinensis (taxid: 2711)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 1
>sp|O04886|PME1_CITSI Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1 Back     alignment and function description
>sp|Q43143|PMEU1_SOLLC Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1 Back     alignment and function description
>sp|P83218|PME_DAUCA Pectinesterase OS=Daucus carota PE=1 SV=1 Back     alignment and function description
>sp|O49006|PME3_ARATH Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2 Back     alignment and function description
>sp|Q42534|PME2_ARATH Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2 Back     alignment and function description
>sp|P83947|PME1_FICPW Pectinesterase/pectinesterase inhibitor OS=Ficus pumila var. awkeotsang PE=1 SV=1 Back     alignment and function description
>sp|O22149|PME17_ARATH Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2 Back     alignment and function description
>sp|O04887|PME2_CITSI Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1 Back     alignment and function description
>sp|P14280|PME1_SOLLC Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query136
57014097 584 RecName: Full=Pectinesterase 3; Short=PE 1.0 0.232 0.977 2e-74
6174912 584 RecName: Full=Pectinesterase 1; Short=PE 1.0 0.232 0.955 6e-73
2098711 584 pectinesterase [Citrus sinensis] 1.0 0.232 0.955 6e-73
7488907 290 pectinesterase (EC 3.1.1.11) PECS1.2 - s 1.0 0.468 0.977 2e-72
91981275229 pectin methylesterase, partial [Citrus b 1.0 0.593 0.955 5e-71
8671350 579 pectin methylesterase [Nicotiana tabacum 1.0 0.234 0.875 4e-67
29602797 579 pectin methyl-esterase [Nicotiana bentha 1.0 0.234 0.867 2e-66
6689892 576 pectin methyl esterase [Solanum tuberosu 1.0 0.236 0.860 6e-66
350538995 583 pectinesterase/pectinesterase inhibitor 1.0 0.233 0.845 3e-65
9716271 579 putative pectin methylesterase [Populus 1.0 0.234 0.852 2e-64
>gi|57014097|sp|P83948.1|PME3_CITSI RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor Back     alignment and taxonomy information
 Score =  283 bits (723), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 133/136 (97%), Positives = 133/136 (97%)

Query: 1   MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDV 60
           M   QGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDV
Sbjct: 449 MVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDV 508

Query: 61  IHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIA 120
           IHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIA
Sbjct: 509 IHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIA 568

Query: 121 GSSWLGSTGFPFSLGL 136
           GSSWLGSTGFPFSLGL
Sbjct: 569 GSSWLGSTGFPFSLGL 584




Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6174912|sp|O04886.1|PME1_CITSI RecName: Full=Pectinesterase 1; Short=PE 1; AltName: Full=Pectin methylesterase; Flags: Precursor gi|2098705|gb|AAB57667.1| pectinesterase [Citrus sinensis] Back     alignment and taxonomy information
>gi|2098711|gb|AAB57670.1| pectinesterase [Citrus sinensis] Back     alignment and taxonomy information
>gi|7488907|pir||T10488 pectinesterase (EC 3.1.1.11) PECS1.2 - sweet orange (fragment) gi|2098707|gb|AAB57668.1| pectinesterase [Citrus sinensis] Back     alignment and taxonomy information
>gi|91981275|gb|ABE67980.1| pectin methylesterase, partial [Citrus bergamia] Back     alignment and taxonomy information
>gi|8671350|emb|CAB95025.1| pectin methylesterase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|29602797|gb|AAO85706.1| pectin methyl-esterase [Nicotiana benthamiana] Back     alignment and taxonomy information
>gi|6689892|gb|AAF23892.1|AF152172_1 pectin methyl esterase [Solanum tuberosum] Back     alignment and taxonomy information
>gi|350538995|ref|NP_001233857.1| pectinesterase/pectinesterase inhibitor U1 precursor [Solanum lycopersicum] gi|6093740|sp|Q43143.1|PMEU1_SOLLC RecName: Full=Pectinesterase/pectinesterase inhibitor U1; Includes: RecName: Full=Pectinesterase inhibitor U1; AltName: Full=Pectin methylesterase inhibitor U1; Includes: RecName: Full=Pectinesterase U1; Short=PE U1; AltName: Full=Pectin methylesterase U1; Flags: Precursor gi|1222552|gb|AAD09283.1| pectin methylesterase [Solanum lycopersicum] gi|15667247|gb|AAL02367.1| pectin methylesterase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|9716271|emb|CAC01624.1| putative pectin methylesterase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query136
TAIR|locus:2091000592 PME3 "pectin methylesterase 3" 1.0 0.229 0.742 8e-53
TAIR|locus:2197056587 PME2 "pectin methylesterase 2" 1.0 0.231 0.727 1.9e-51
TAIR|locus:2050941511 AT2G45220 [Arabidopsis thalian 0.963 0.256 0.643 8.1e-44
TAIR|locus:2200076557 PMEPCRA "methylesterase PCR A" 0.970 0.236 0.606 3.4e-38
TAIR|locus:2154277587 PMEPCRF "pectin methylesterase 0.970 0.224 0.583 1e-37
TAIR|locus:2099565594 AT3G47400 [Arabidopsis thalian 0.970 0.222 0.589 1.6e-37
TAIR|locus:2101836519 AT3G60730 [Arabidopsis thalian 1.0 0.262 0.536 3e-37
TAIR|locus:2153112536 AT5G51490 [Arabidopsis thalian 0.970 0.246 0.544 2.7e-36
TAIR|locus:2082951598 AT3G49220 [Arabidopsis thalian 0.970 0.220 0.575 1.2e-35
TAIR|locus:2137839532 AT4G02300 [Arabidopsis thalian 0.963 0.246 0.580 3.1e-35
TAIR|locus:2091000 PME3 "pectin methylesterase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 101/136 (74%), Positives = 112/136 (82%)

Query:     1 MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDV 60
             M   QGR DPNQNTGIVIQK RIGATSDL+ V+GSFPTYLGRPWKEYS+TVIMQS+I+DV
Sbjct:   457 MVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDV 516

Query:    61 IHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIA 120
             I P GW EW G FALNTL Y E+ N GAGAGT+ RVKW+GF+VIT+A EAQ +T G FI 
Sbjct:   517 IRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIG 576

Query:   121 GSSWLGSTGFPFSLGL 136
             G  WL STGFPFSLGL
Sbjct:   577 GGGWLSSTGFPFSLGL 592




GO:0004857 "enzyme inhibitor activity" evidence=IEA
GO:0005618 "cell wall" evidence=IEA;IDA
GO:0030599 "pectinesterase activity" evidence=IEA;ISS;IMP
GO:0042545 "cell wall modification" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0009624 "response to nematode" evidence=IMP
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006569 "tryptophan catabolic process" evidence=RCA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA
TAIR|locus:2197056 PME2 "pectin methylesterase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050941 AT2G45220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200076 PMEPCRA "methylesterase PCR A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154277 PMEPCRF "pectin methylesterase PCR fragment F" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099565 AT3G47400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2101836 AT3G60730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153112 AT5G51490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082951 AT3G49220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137839 AT4G02300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P83948PME3_CITSI3, ., 1, ., 1, ., 1, 10.97791.00.2328yesno
O49006PME3_ARATH3, ., 1, ., 1, ., 1, 10.74261.00.2297yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1.110.824
3rd Layer3.1.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query136
pfam01095298 pfam01095, Pectinesterase, Pectinesterase 5e-77
PLN02313587 PLN02313, PLN02313, Pectinesterase/pectinesterase 3e-73
PLN02301548 PLN02301, PLN02301, pectinesterase/pectinesterase 5e-69
PLN02484587 PLN02484, PLN02484, probable pectinesterase/pectin 1e-58
PLN02713566 PLN02713, PLN02713, Probable pectinesterase/pectin 2e-55
PLN02916502 PLN02916, PLN02916, pectinesterase family protein 2e-52
PLN02933530 PLN02933, PLN02933, Probable pectinesterase/pectin 2e-52
PLN02201520 PLN02201, PLN02201, probable pectinesterase/pectin 1e-51
PLN02745596 PLN02745, PLN02745, Putative pectinesterase/pectin 2e-51
PLN02170529 PLN02170, PLN02170, probable pectinesterase/pectin 4e-51
PLN03043538 PLN03043, PLN03043, Probable pectinesterase/pectin 9e-48
PLN02506537 PLN02506, PLN02506, putative pectinesterase/pectin 4e-47
PLN02995539 PLN02995, PLN02995, Probable pectinesterase/pectin 3e-46
PLN02468565 PLN02468, PLN02468, putative pectinesterase/pectin 5e-45
PLN02488509 PLN02488, PLN02488, probable pectinesterase/pectin 7e-45
PLN02698497 PLN02698, PLN02698, Probable pectinesterase/pectin 3e-44
PLN02314586 PLN02314, PLN02314, pectinesterase 1e-42
PLN02416541 PLN02416, PLN02416, probable pectinesterase/pectin 6e-42
PLN02990572 PLN02990, PLN02990, Probable pectinesterase/pectin 3e-38
PLN02217 670 PLN02217, PLN02217, probable pectinesterase/pectin 8e-37
PLN02708553 PLN02708, PLN02708, Probable pectinesterase/pectin 7e-30
PLN02197588 PLN02197, PLN02197, pectinesterase 2e-25
PLN02497331 PLN02497, PLN02497, probable pectinesterase 1e-20
PLN02432293 PLN02432, PLN02432, putative pectinesterase 2e-19
PLN02671359 PLN02671, PLN02671, pectinesterase 2e-18
PLN02682369 PLN02682, PLN02682, pectinesterase family protein 4e-16
PLN02304379 PLN02304, PLN02304, probable pectinesterase 5e-16
PLN02665366 PLN02665, PLN02665, pectinesterase family protein 1e-14
PLN02176340 PLN02176, PLN02176, putative pectinesterase 4e-12
PLN02634359 PLN02634, PLN02634, probable pectinesterase 1e-10
PLN02480343 PLN02480, PLN02480, Probable pectinesterase 2e-09
PLN02773317 PLN02773, PLN02773, pectinesterase 3e-09
>gnl|CDD|216297 pfam01095, Pectinesterase, Pectinesterase Back     alignment and domain information
 Score =  229 bits (587), Expect = 5e-77
 Identities = 82/118 (69%), Positives = 94/118 (79%)

Query: 5   QGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPA 64
           QGR DPNQNTGIVIQ  RI A  DL PV+G+F TYLGRPWKEYSRTVIMQS I DVI PA
Sbjct: 181 QGRTDPNQNTGIVIQNCRITADPDLLPVKGTFKTYLGRPWKEYSRTVIMQSYIDDVIDPA 240

Query: 65  GWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGS 122
           GW  W+G+FAL+TL+YGE+ N+G GAGTS RVKW G++VI S  EA  FT G+FI G+
Sbjct: 241 GWLPWNGDFALDTLYYGEYNNSGPGAGTSKRVKWPGYKVILSDEEALKFTVGNFIGGN 298


Length = 298

>gnl|CDD|177947 PLN02313, PLN02313, Pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|215170 PLN02301, PLN02301, pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|178102 PLN02484, PLN02484, probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|215383 PLN02713, PLN02713, Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|178504 PLN02916, PLN02916, pectinesterase family protein Back     alignment and domain information
>gnl|CDD|178521 PLN02933, PLN02933, Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|177852 PLN02201, PLN02201, probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|178346 PLN02745, PLN02745, Putative pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|215114 PLN02170, PLN02170, probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|178606 PLN03043, PLN03043, Probable pectinesterase/pectinesterase inhibitor; Provisional Back     alignment and domain information
>gnl|CDD|215280 PLN02506, PLN02506, putative pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|178574 PLN02995, PLN02995, Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|178087 PLN02468, PLN02468, putative pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|178106 PLN02488, PLN02488, probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|178301 PLN02698, PLN02698, Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|215179 PLN02314, PLN02314, pectinesterase Back     alignment and domain information
>gnl|CDD|178037 PLN02416, PLN02416, probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|215535 PLN02990, PLN02990, Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|215130 PLN02217, PLN02217, probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|215379 PLN02708, PLN02708, Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>gnl|CDD|177848 PLN02197, PLN02197, pectinesterase Back     alignment and domain information
>gnl|CDD|178113 PLN02497, PLN02497, probable pectinesterase Back     alignment and domain information
>gnl|CDD|178051 PLN02432, PLN02432, putative pectinesterase Back     alignment and domain information
>gnl|CDD|178276 PLN02671, PLN02671, pectinesterase Back     alignment and domain information
>gnl|CDD|215367 PLN02682, PLN02682, pectinesterase family protein Back     alignment and domain information
>gnl|CDD|215173 PLN02304, PLN02304, probable pectinesterase Back     alignment and domain information
>gnl|CDD|215357 PLN02665, PLN02665, pectinesterase family protein Back     alignment and domain information
>gnl|CDD|215117 PLN02176, PLN02176, putative pectinesterase Back     alignment and domain information
>gnl|CDD|215340 PLN02634, PLN02634, probable pectinesterase Back     alignment and domain information
>gnl|CDD|178098 PLN02480, PLN02480, Probable pectinesterase Back     alignment and domain information
>gnl|CDD|178372 PLN02773, PLN02773, pectinesterase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 136
PLN02488509 probable pectinesterase/pectinesterase inhibitor 100.0
PLN02916502 pectinesterase family protein 100.0
PLN02301548 pectinesterase/pectinesterase inhibitor 100.0
PLN02201520 probable pectinesterase/pectinesterase inhibitor 100.0
PLN02933530 Probable pectinesterase/pectinesterase inhibitor 100.0
PLN02313587 Pectinesterase/pectinesterase inhibitor 100.0
PLN02484587 probable pectinesterase/pectinesterase inhibitor 100.0
PLN02713566 Probable pectinesterase/pectinesterase inhibitor 100.0
PLN03043538 Probable pectinesterase/pectinesterase inhibitor; 100.0
PLN02995539 Probable pectinesterase/pectinesterase inhibitor 100.0
PLN02416541 probable pectinesterase/pectinesterase inhibitor 100.0
PLN02170529 probable pectinesterase/pectinesterase inhibitor 100.0
PLN02698497 Probable pectinesterase/pectinesterase inhibitor 100.0
PLN02217 670 probable pectinesterase/pectinesterase inhibitor 100.0
PLN02745596 Putative pectinesterase/pectinesterase inhibitor 100.0
PLN02990572 Probable pectinesterase/pectinesterase inhibitor 100.0
PLN02468565 putative pectinesterase/pectinesterase inhibitor 100.0
PLN02197588 pectinesterase 100.0
PLN02506537 putative pectinesterase/pectinesterase inhibitor 100.0
PLN02314586 pectinesterase 100.0
PLN02497331 probable pectinesterase 100.0
PLN02176340 putative pectinesterase 100.0
PLN02708553 Probable pectinesterase/pectinesterase inhibitor 100.0
PLN02634359 probable pectinesterase 100.0
PLN02671359 pectinesterase 100.0
PLN02304379 probable pectinesterase 100.0
PLN02480343 Probable pectinesterase 100.0
PLN02665366 pectinesterase family protein 100.0
PLN02682369 pectinesterase family protein 100.0
PLN02432293 putative pectinesterase 100.0
PLN02773317 pectinesterase 100.0
PF01095298 Pectinesterase: Pectinesterase; InterPro: IPR00007 100.0
PRK10531422 acyl-CoA thioesterase; Provisional 99.84
COG4677405 PemB Pectin methylesterase [Carbohydrate transport 99.71
>PLN02488 probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
Probab=100.00  E-value=1.4e-47  Score=328.22  Aligned_cols=136  Identities=49%  Similarity=0.937  Sum_probs=127.0

Q ss_pred             CeecCCCCCCCCCeeEEEECcEEeeCCCCCCCCCCcceEecCCCCCCCceEEEcCccCCcccCCCCCCCCCCCCCCccEE
Q 032667            1 MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFY   80 (136)
Q Consensus         1 ~ITA~~r~~~~~~~GfvF~~C~i~~~~~~~~~~~~~~~yLGRPW~~~arvvf~~s~i~~~I~p~GW~~w~~~~~~~t~~f   80 (136)
                      +||||+|+++.+++||||++|+|+++++..+.....++||||||++|||||||+|+|+++|+|+||.+|+++..+++++|
T Consensus       374 ~ITAq~R~~~~~~tGfvf~~C~it~~~~~~~~~~~~~~YLGRPW~~ySrvVf~~s~i~~~I~P~GW~~W~~~~~~~t~~y  453 (509)
T PLN02488        374 VITAQSRESKDDNSGFSIQKCNITASSDLDPVKATVKTYLGRPWRKYSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLYY  453 (509)
T ss_pred             EEEeCCCCCCCCCcEEEEEeeEEecCCcccccccccceeecCCCCCCccEEEEeccCCCeecccccCccCCCCCCCceEE
Confidence            59999999999999999999999999876544445689999999999999999999999999999999998878899999


Q ss_pred             EEeecccCCCCCCCcccccceeeeCCHHHHhccCccccccCCCCCCCCCCCCCCCC
Q 032667           81 GEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL  136 (136)
Q Consensus        81 ~Ey~n~GpGa~~s~Rv~w~~~l~~~s~~ea~~~t~~~~i~g~~W~p~~~~p~~~~~  136 (136)
                      +||+|+||||++++||+|++++++++++||++|+..+||+|++|+|.++|||..||
T Consensus       454 aEY~n~GPGA~~s~RV~W~g~~~l~~~~eA~~ft~~~fi~G~~Wl~~tgvp~~~gl  509 (509)
T PLN02488        454 GEYQNRGPGAVTSKRVKWTGFRVMTDPKEATKFTVAKLLDGESWLKASGVPYEKGL  509 (509)
T ss_pred             EEecccCCCCCcCCCcccccccccCCHHHHHhhhHHheeCCCCcCCCCCCCcCCCC
Confidence            99999999999999999998877777999999999999999999999999999997



>PLN02916 pectinesterase family protein Back     alignment and domain information
>PLN02301 pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02201 probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02933 Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02313 Pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02484 probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02713 Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional Back     alignment and domain information
>PLN02995 Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02416 probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02170 probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02698 Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02217 probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02745 Putative pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02990 Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02468 putative pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02197 pectinesterase Back     alignment and domain information
>PLN02506 putative pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02314 pectinesterase Back     alignment and domain information
>PLN02497 probable pectinesterase Back     alignment and domain information
>PLN02176 putative pectinesterase Back     alignment and domain information
>PLN02708 Probable pectinesterase/pectinesterase inhibitor Back     alignment and domain information
>PLN02634 probable pectinesterase Back     alignment and domain information
>PLN02671 pectinesterase Back     alignment and domain information
>PLN02304 probable pectinesterase Back     alignment and domain information
>PLN02480 Probable pectinesterase Back     alignment and domain information
>PLN02665 pectinesterase family protein Back     alignment and domain information
>PLN02682 pectinesterase family protein Back     alignment and domain information
>PLN02432 putative pectinesterase Back     alignment and domain information
>PLN02773 pectinesterase Back     alignment and domain information
>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3 Back     alignment and domain information
>PRK10531 acyl-CoA thioesterase; Provisional Back     alignment and domain information
>COG4677 PemB Pectin methylesterase [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query136
1gq8_A319 Pectin Methylesterase From Carrot Length = 319 5e-64
1xg2_A317 Crystal Structure Of The Complex Between Pectin Met 5e-43
>pdb|1GQ8|A Chain A, Pectin Methylesterase From Carrot Length = 319 Back     alignment and structure

Iteration: 1

Score = 239 bits (609), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 112/136 (82%), Positives = 122/136 (89%) Query: 1 MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDV 60 M QGR DPNQNTGIVIQKSRIGATSDL+PVQ SFPTYLGRPWKEYSRTV+MQSSIT+V Sbjct: 184 MVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNV 243 Query: 61 IHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIA 120 I+PAGW WDGNFAL+TL+YGE+QN GAGA TSGRV WKGF+VITS+TEAQ FTPGSFIA Sbjct: 244 INPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIA 303 Query: 121 GSSWLGSTGFPFSLGL 136 G SWL +T FPFSLGL Sbjct: 304 GGSWLKATTFPFSLGL 319
>pdb|1XG2|A Chain A, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein Length = 317 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query136
1gq8_A319 Pectinesterase; hydrolase, carboxylic ester hydrol 2e-68
1xg2_A317 Pectinesterase 1; protein-protein complex, beta he 9e-68
2nsp_A342 Pectinesterase A; michaelis complex, hydrolase; HE 5e-39
3uw0_A364 Pectinesterase; right-handed beta-helix, carbohydr 2e-31
3grh_A422 YBHC, acyl-COA thioester hydrolase YBGC; beta-heli 8e-21
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5 Length = 319 Back     alignment and structure
 Score =  207 bits (530), Expect = 2e-68
 Identities = 111/132 (84%), Positives = 121/132 (91%)

Query: 5   QGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPA 64
           QGR DPNQNTGIVIQKSRIGATSDL+PVQ SFPTYLGRPWKEYSRTV+MQSSIT+VI+PA
Sbjct: 188 QGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPA 247

Query: 65  GWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSW 124
           GW  WDGNFAL+TL+YGE+QN GAGA TSGRV WKGF+VITS+TEAQ FTPGSFIAG SW
Sbjct: 248 GWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSW 307

Query: 125 LGSTGFPFSLGL 136
           L +T FPFSLGL
Sbjct: 308 LKATTFPFSLGL 319


>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum} Length = 317 Back     alignment and structure
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A Length = 342 Back     alignment and structure
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp} Length = 364 Back     alignment and structure
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12} Length = 422 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query136
1gq8_A319 Pectinesterase; hydrolase, carboxylic ester hydrol 100.0
1xg2_A317 Pectinesterase 1; protein-protein complex, beta he 100.0
2nsp_A342 Pectinesterase A; michaelis complex, hydrolase; HE 100.0
3uw0_A364 Pectinesterase; right-handed beta-helix, carbohydr 100.0
3grh_A422 YBHC, acyl-COA thioester hydrolase YBGC; beta-heli 99.9
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5 Back     alignment and structure
Probab=100.00  E-value=2.2e-47  Score=312.11  Aligned_cols=136  Identities=82%  Similarity=1.349  Sum_probs=125.5

Q ss_pred             CeecCCCCCCCCCeeEEEECcEEeeCCCCCCCCCCcceEecCCCCCCCceEEEcCccCCcccCCCCCCCCCCCCCCccEE
Q 032667            1 MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFY   80 (136)
Q Consensus         1 ~ITA~~r~~~~~~~GfvF~~C~i~~~~~~~~~~~~~~~yLGRPW~~~arvvf~~s~i~~~I~p~GW~~w~~~~~~~t~~f   80 (136)
                      +||||+|+++.+++||||++|+|+++++..+.....++||||||++||||||++|+|+++|+|+||.+|++..++++++|
T Consensus       184 ~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~~~I~p~GW~~w~~~~~~~t~~y  263 (319)
T 1gq8_A          184 MVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYY  263 (319)
T ss_dssp             EEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSSTTCEEEEESCEECTTBCTTCCCCSSTTTTTTTCEE
T ss_pred             EEEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecccCCCcceEEEEeccCCCcccccccCcCCCCCCCCeeEE
Confidence            48999999999999999999999998875433234589999999999999999999999999999999998878899999


Q ss_pred             EEeecccCCCCCCCcccccceeeeCCHHHHhccCccccccCCCCCCCCCCCCCCCC
Q 032667           81 GEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL  136 (136)
Q Consensus        81 ~Ey~n~GpGa~~s~Rv~w~~~l~~~s~~ea~~~t~~~~i~g~~W~p~~~~p~~~~~  136 (136)
                      +||+|+|||+++++||+|++++++++++||++|+..+||+|++|+|.++|||.+||
T Consensus       264 ~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~t~~~~i~g~~W~p~~~~~~~~~~  319 (319)
T 1gq8_A          264 GEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL  319 (319)
T ss_dssp             EEESCBSGGGCCTTCCCCTTEEECCCHHHHHTTSHHHHSCGGGTSGGGTSCCCCCC
T ss_pred             EEEccccCCCCcccccccccccccCCHHHHHhhhHHhhcCCCCCcCCCCccccCCC
Confidence            99999999999999999999777767899999999999999899999999999997



>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum} Back     alignment and structure
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A Back     alignment and structure
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp} Back     alignment and structure
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 136
d1gq8a_319 b.80.1.5 (A:) Pectin methylesterase PemA {Carrot ( 9e-60
d1qjva_342 b.80.1.5 (A:) Pectin methylesterase PemA {Erwinia 7e-24
>d1gq8a_ b.80.1.5 (A:) Pectin methylesterase PemA {Carrot (Daucus carota) [TaxId: 4039]} Length = 319 Back     information, alignment and structure

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin methylesterase
domain: Pectin methylesterase PemA
species: Carrot (Daucus carota) [TaxId: 4039]
 Score =  184 bits (469), Expect = 9e-60
 Identities = 111/133 (83%), Positives = 121/133 (90%)

Query: 4   TQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHP 63
            QGR DPNQNTGIVIQKSRIGATSDL+PVQ SFPTYLGRPWKEYSRTV+MQSSIT+VI+P
Sbjct: 187 AQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINP 246

Query: 64  AGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSS 123
           AGW  WDGNFAL+TL+YGE+QN GAGA TSGRV WKGF+VITS+TEAQ FTPGSFIAG S
Sbjct: 247 AGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGS 306

Query: 124 WLGSTGFPFSLGL 136
           WL +T FPFSLGL
Sbjct: 307 WLKATTFPFSLGL 319


>d1qjva_ b.80.1.5 (A:) Pectin methylesterase PemA {Erwinia chrysanthemi [TaxId: 556]} Length = 342 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query136
d1gq8a_319 Pectin methylesterase PemA {Carrot (Daucus carota) 100.0
d1qjva_342 Pectin methylesterase PemA {Erwinia chrysanthemi [ 99.97
>d1gq8a_ b.80.1.5 (A:) Pectin methylesterase PemA {Carrot (Daucus carota) [TaxId: 4039]} Back     information, alignment and structure
class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin methylesterase
domain: Pectin methylesterase PemA
species: Carrot (Daucus carota) [TaxId: 4039]
Probab=100.00  E-value=2.4e-48  Score=315.92  Aligned_cols=136  Identities=82%  Similarity=1.349  Sum_probs=127.2

Q ss_pred             CeecCCCCCCCCCeeEEEECcEEeeCCCCCCCCCCcceEecCCCCCCCceEEEcCccCCcccCCCCCCCCCCCCCCccEE
Q 032667            1 MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFY   80 (136)
Q Consensus         1 ~ITA~~r~~~~~~~GfvF~~C~i~~~~~~~~~~~~~~~yLGRPW~~~arvvf~~s~i~~~I~p~GW~~w~~~~~~~t~~f   80 (136)
                      +||||+|+++.+++||||++|+|+++++..+.....++||||||+++|||||++|+|+++|+|+||.+|+...++++++|
T Consensus       184 ~itA~~r~~~~~~~Gfvf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~vvf~~t~l~~~I~p~GW~~w~~~~~~~t~~f  263 (319)
T d1gq8a_         184 MVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYY  263 (319)
T ss_dssp             EEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSSTTCEEEEESCEECTTBCTTCCCCSSTTTTTTTCEE
T ss_pred             EEEEcCcCCCCCCcEEEEEeeEEeCCCCccccccccceeccCCCCCcceEEEEecccccccccccccccCCCCccCceEE
Confidence            38999999999999999999999999876544445689999999999999999999999999999999998888899999


Q ss_pred             EEeecccCCCCCCCcccccceeeeCCHHHHhccCccccccCCCCCCCCCCCCCCCC
Q 032667           81 GEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL  136 (136)
Q Consensus        81 ~Ey~n~GpGa~~s~Rv~w~~~l~~~s~~ea~~~t~~~~i~g~~W~p~~~~p~~~~~  136 (136)
                      +||+|+|||+++++||+|++++++|+++||+.|+.++||+|++|+|.++|||.+||
T Consensus       264 ~Ey~n~GpGa~~s~Rv~w~~~~~~l~~~ea~~ft~~~fi~G~~Wl~~t~~p~~~~l  319 (319)
T d1gq8a_         264 GEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL  319 (319)
T ss_dssp             EEESCBSGGGCCTTCCCCTTEEECCCHHHHHTTSHHHHSCGGGTSGGGTSCCCCCC
T ss_pred             EEEeccCCCcCcCCcccccceeeeCCHHHHHhhhHHhhcCCCcccccCCCccCCCC
Confidence            99999999999999999998777779999999999999999889999999999997



>d1qjva_ b.80.1.5 (A:) Pectin methylesterase PemA {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure