Citrus Sinensis ID: 032759
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 134 | ||||||
| 399920236 | 832 | yellow stripe-like protein [Rosa rugosa] | 1.0 | 0.161 | 0.843 | 3e-63 | |
| 357464067 | 841 | YSL transporter [Medicago truncatula] gi | 1.0 | 0.159 | 0.835 | 1e-62 | |
| 388502872 | 134 | unknown [Medicago truncatula] | 1.0 | 1.0 | 0.835 | 7e-62 | |
| 449456423 | 134 | PREDICTED: cytochrome b5 isoform A-like | 1.0 | 1.0 | 0.835 | 7e-62 | |
| 225455278 | 134 | PREDICTED: cytochrome b5 isoform 1 [Viti | 1.0 | 1.0 | 0.828 | 2e-61 | |
| 351726704 | 134 | uncharacterized protein LOC100305929 [Gl | 1.0 | 1.0 | 0.835 | 5e-61 | |
| 351723153 | 134 | uncharacterized protein LOC100499823 [Gl | 1.0 | 1.0 | 0.835 | 9e-61 | |
| 330318688 | 134 | cytochrome b5 [Camellia sinensis] | 1.0 | 1.0 | 0.828 | 2e-60 | |
| 2695711 | 134 | cytochome b5 [Olea europaea] | 1.0 | 1.0 | 0.820 | 6e-60 | |
| 297792731 | 134 | ATB5-A [Arabidopsis lyrata subsp. lyrata | 1.0 | 1.0 | 0.805 | 7e-60 |
| >gi|399920236|gb|AFP55583.1| yellow stripe-like protein [Rosa rugosa] | Back alignment and taxonomy information |
|---|
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/134 (84%), Positives = 123/134 (91%)
Query: 1 MASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFE 60
MASDPK+H FEEVA HN+TKDCWL+ISGKVYDV+ FMDDHPGGDEVL+SATGKDATNDFE
Sbjct: 699 MASDPKVHVFEEVAKHNQTKDCWLVISGKVYDVTPFMDDHPGGDEVLLSATGKDATNDFE 758
Query: 61 DVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPPQQPAYNQDKTPEFIIKILQILVPLLI 120
DVGHSD+AR+MMDKYYIG+IDPSTVP KR YIPP Q YN DKT EF+IKILQ LVPLLI
Sbjct: 759 DVGHSDAARDMMDKYYIGEIDPSTVPLKRTYIPPPQTQYNPDKTSEFVIKILQFLVPLLI 818
Query: 121 LGLAFAVRHYTKKE 134
LGLAFAVRH+TKKE
Sbjct: 819 LGLAFAVRHFTKKE 832
|
Source: Rosa rugosa Species: Rosa rugosa Genus: Rosa Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357464067|ref|XP_003602315.1| YSL transporter [Medicago truncatula] gi|355491363|gb|AES72566.1| YSL transporter [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|388502872|gb|AFK39502.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449456423|ref|XP_004145949.1| PREDICTED: cytochrome b5 isoform A-like [Cucumis sativus] gi|449497404|ref|XP_004160392.1| PREDICTED: cytochrome b5 isoform A-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|225455278|ref|XP_002273913.1| PREDICTED: cytochrome b5 isoform 1 [Vitis vinifera] gi|302143955|emb|CBI23060.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|351726704|ref|NP_001235088.1| uncharacterized protein LOC100305929 [Glycine max] gi|255627013|gb|ACU13851.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|351723153|ref|NP_001236501.1| uncharacterized protein LOC100499823 [Glycine max] gi|255626921|gb|ACU13805.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|330318688|gb|AEC11004.1| cytochrome b5 [Camellia sinensis] | Back alignment and taxonomy information |
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| >gi|2695711|emb|CAA04703.1| cytochome b5 [Olea europaea] | Back alignment and taxonomy information |
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| >gi|297792731|ref|XP_002864250.1| ATB5-A [Arabidopsis lyrata subsp. lyrata] gi|297310085|gb|EFH40509.1| ATB5-A [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 134 | ||||||
| TAIR|locus:2168666 | 134 | CB5-E "cytochrome B5 isoform E | 1.0 | 1.0 | 0.694 | 1.8e-48 | |
| TAIR|locus:2046417 | 134 | CB5-B "cytochrome B5 isoform B | 0.985 | 0.985 | 0.553 | 1.8e-39 | |
| TAIR|locus:2156534 | 140 | CB5-D "cytochrome B5 isoform D | 0.985 | 0.942 | 0.492 | 1.1e-34 | |
| TAIR|locus:2028721 | 135 | CB5-A "cytochrome B5 isoform A | 0.604 | 0.6 | 0.641 | 1.5e-28 | |
| TAIR|locus:2039939 | 132 | CB5-C "AT2G46650" [Arabidopsis | 0.925 | 0.939 | 0.484 | 1.3e-27 | |
| UNIPROTKB|Q0P5F6 | 146 | CYB5B "Uncharacterized protein | 0.656 | 0.602 | 0.550 | 2.9e-23 | |
| UNIPROTKB|F1S393 | 144 | CYB5B "Uncharacterized protein | 0.649 | 0.604 | 0.528 | 3.8e-23 | |
| MGI|MGI:1913677 | 146 | Cyb5b "cytochrome b5 type B" [ | 0.641 | 0.589 | 0.5 | 4.3e-22 | |
| RGD|621551 | 146 | Cyb5b "cytochrome b5 type B (o | 0.641 | 0.589 | 0.5 | 5.5e-22 | |
| ZFIN|ZDB-GENE-040426-2614 | 153 | cyb5b "cytochrome b5 type B" [ | 0.671 | 0.588 | 0.526 | 7e-22 |
| TAIR|locus:2168666 CB5-E "cytochrome B5 isoform E" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 93/134 (69%), Positives = 106/134 (79%)
Query: 1 MASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFE 60
M+SD K+ FEEV+ HNKTKDCWLIISGKVYDV+ FMDDHPGGDEVL+S+TGKDATNDFE
Sbjct: 1 MSSDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFE 60
Query: 61 DVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPPQQPAYNQDKTPEFXXXXXXXXXXXXX 120
DVGHSD+AR+MMDKY+IG+ID S+VP R Y+ PQQPAYNQDKTPEF
Sbjct: 61 DVGHSDTARDMMDKYFIGEIDSSSVPATRTYVAPQQPAYNQDKTPEFIIKILQFLVPILI 120
Query: 121 XXXAFAVRHYTKKE 134
A VRHYTKK+
Sbjct: 121 LGLALVVRHYTKKD 134
|
|
| TAIR|locus:2046417 CB5-B "cytochrome B5 isoform B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2156534 CB5-D "cytochrome B5 isoform D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2028721 CB5-A "cytochrome B5 isoform A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2039939 CB5-C "AT2G46650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q0P5F6 CYB5B "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1S393 CYB5B "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1913677 Cyb5b "cytochrome b5 type B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|621551 Cyb5b "cytochrome b5 type B (outer mitochondrial membrane)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-2614 cyb5b "cytochrome b5 type B" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00037202001 | SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (134 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 134 | |||
| pfam00173 | 74 | pfam00173, Cyt-b5, Cytochrome b5-like Heme/Steroid | 1e-34 | |
| PLN02252 | 888 | PLN02252, PLN02252, nitrate reductase [NADPH] | 3e-26 | |
| COG5274 | 164 | COG5274, CYB5, Cytochrome b involved in lipid meta | 1e-24 | |
| PLN03198 | 526 | PLN03198, PLN03198, delta6-acyl-lipid desaturase; | 4e-18 | |
| PLN03199 | 485 | PLN03199, PLN03199, delta6-acyl-lipid desaturase-l | 4e-15 |
| >gnl|CDD|201057 pfam00173, Cyt-b5, Cytochrome b5-like Heme/Steroid binding domain | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 1e-34
Identities = 41/71 (57%), Positives = 59/71 (83%)
Query: 11 EEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSARE 70
EEV HNK DCW++I+GKVYDV+ F+ DHPGG++V++SA GKDAT FED HS++AR+
Sbjct: 4 EEVKKHNKDGDCWIVINGKVYDVTRFLKDHPGGEDVILSAAGKDATEAFEDAIHSEAARK 63
Query: 71 MMDKYYIGDID 81
+++KY +G++D
Sbjct: 64 LLEKYRVGELD 74
|
This family includes heme binding domains from a diverse range of proteins. This family also includes proteins that bind to steroids. The family includes progesterone receptors. Many members of this subfamily are membrane anchored by an N-terminal transmembrane alpha helix. This family also includes a domain in some chitin synthases. There is no known ligand for this domain in the chitin synthases. Length = 74 |
| >gnl|CDD|215141 PLN02252, PLN02252, nitrate reductase [NADPH] | Back alignment and domain information |
|---|
| >gnl|CDD|227599 COG5274, CYB5, Cytochrome b involved in lipid metabolism [Energy production and conversion / Lipid metabolism] | Back alignment and domain information |
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| >gnl|CDD|178739 PLN03198, PLN03198, delta6-acyl-lipid desaturase; Provisional | Back alignment and domain information |
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| >gnl|CDD|178740 PLN03199, PLN03199, delta6-acyl-lipid desaturase-like protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 134 | |||
| KOG0537 | 124 | consensus Cytochrome b5 [Energy production and con | 100.0 | |
| PF00173 | 76 | Cyt-b5: Cytochrome b5-like Heme/Steroid binding do | 99.92 | |
| KOG0536 | 145 | consensus Flavohemoprotein b5+b5R [Energy producti | 99.89 | |
| PLN03199 | 485 | delta6-acyl-lipid desaturase-like protein; Provisi | 99.85 | |
| PLN03198 | 526 | delta6-acyl-lipid desaturase; Provisional | 99.85 | |
| COG5274 | 164 | CYB5 Cytochrome b involved in lipid metabolism [En | 99.83 | |
| PLN02252 | 888 | nitrate reductase [NADPH] | 99.82 | |
| KOG4576 | 167 | consensus Sulfite oxidase, heme-binding component | 99.66 | |
| KOG4232 | 430 | consensus Delta 6-fatty acid desaturase/delta-8 sp | 99.62 | |
| COG4892 | 81 | Predicted heme/steroid binding protein [General fu | 98.73 | |
| KOG1110 | 183 | consensus Putative steroid membrane receptor Hpr6. | 97.84 | |
| KOG1108 | 281 | consensus Predicted heme/steroid binding protein [ | 96.67 | |
| PF14901 | 94 | Jiv90: Cleavage inducing molecular chaperone | 90.39 |
| >KOG0537 consensus Cytochrome b5 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=201.23 Aligned_cols=120 Identities=47% Similarity=0.782 Sum_probs=95.0
Q ss_pred CCCCcCHHHHhcccCCCCeEEEEcCEEEeccccCCCCCChHHHHHHhhCCCCchhhhhcCCCHHHHHhhhcCeeEEeCCC
Q 032759 4 DPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPS 83 (134)
Q Consensus 4 ~~~~~t~~ev~~h~~~~~~wvvi~g~VYDvt~f~~~HPGG~~~l~~~aG~D~T~~f~~~~Hs~~a~~~l~~~~VG~l~~~ 83 (134)
.++.||.+||++||+.+||||+|+|+|||||+|+++||||.++|+.+||+|+|+.|++.+||.+|++||++|+||.+...
T Consensus 3 ~~k~~~~~EV~kHn~~~d~Wvii~gkVYDvT~Fl~eHPGG~~vLl~~AGkDaT~~F~~~gHS~~A~~ml~~y~ig~~~~~ 82 (124)
T KOG0537|consen 3 DLKYYTLSEVAKHNKKDDCWVIIHGKVYDVTSFLDEHPGGEDVLLEYAGKDATEAFEDVGHSKDAREMLEEYYIGEVPTT 82 (124)
T ss_pred ccccccHHHHHhhcCCCCeEEEECCEEEeccchhhhCCChHHHHHHHhchhhHHhccccCCcHHHHHHhhhcccccccCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 032759 84 TVPRKRAYIPPQQPAYNQDKTPEFIIKILQILVPLLILGLAFAVRHYT 131 (134)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (134)
..+...... ..........+..+.+.++++.+++.++.+.
T Consensus 83 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (124)
T KOG0537|consen 83 ARPVVWSNT--------AGYEVDRLTVSGGLLVAILILPLQEHILGLT 122 (124)
T ss_pred Cccceeccc--------cccccccccccccceeeeeechhhhhhhhcc
Confidence 765543222 1111111222333556666666655555443
|
|
| >PF00173 Cyt-b5: Cytochrome b5-like Heme/Steroid binding domain This prints entry is a subset of the Pfam entry; InterPro: IPR001199 Cytochromes b5 are ubiquitous electron transport proteins found in animals, plants and yeasts [] | Back alignment and domain information |
|---|
| >KOG0536 consensus Flavohemoprotein b5+b5R [Energy production and conversion] | Back alignment and domain information |
|---|
| >PLN03199 delta6-acyl-lipid desaturase-like protein; Provisional | Back alignment and domain information |
|---|
| >PLN03198 delta6-acyl-lipid desaturase; Provisional | Back alignment and domain information |
|---|
| >COG5274 CYB5 Cytochrome b involved in lipid metabolism [Energy production and conversion / Lipid metabolism] | Back alignment and domain information |
|---|
| >PLN02252 nitrate reductase [NADPH] | Back alignment and domain information |
|---|
| >KOG4576 consensus Sulfite oxidase, heme-binding component [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG4232 consensus Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >COG4892 Predicted heme/steroid binding protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1110 consensus Putative steroid membrane receptor Hpr6 | Back alignment and domain information |
|---|
| >KOG1108 consensus Predicted heme/steroid binding protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF14901 Jiv90: Cleavage inducing molecular chaperone | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 134 | ||||
| 3ner_A | 92 | Structure Of Human Type B Cytochrome B5 Length = 92 | 8e-24 | ||
| 3mus_A | 87 | 2a Resolution Structure Of Rat Type B Cytochrome B5 | 2e-22 | ||
| 1awp_A | 92 | Rat Outer Mitochondrial Membrane Cytochrome B5 Leng | 3e-22 | ||
| 1b5m_A | 84 | Rat Outer Mitochondrial Membrane Cytochrome B5 Leng | 3e-22 | ||
| 2i89_A | 93 | Structure Of Septuple Mutant Of Rat Outer Mitochond | 3e-22 | ||
| 1eue_A | 86 | Rat Outer Mitochondrial Membrane Cytochrome B5 Leng | 5e-22 | ||
| 1icc_A | 87 | Rat Outer Mitochondrial Membrane Cytochrome B5 Leng | 8e-22 | ||
| 1lj0_A | 92 | Structure Of Quintuple Mutant Of The Rat Outer Mito | 1e-21 | ||
| 2i96_A | 108 | Solution Structure Of The Oxidized Microsomal Human | 7e-20 | ||
| 3ozz_B | 82 | Structure Of A Cytochrome B5 Core-Swap Mutant Lengt | 7e-20 | ||
| 2m33_A | 104 | Solution Nmr Structure Of Full-length Oxidized Micr | 2e-19 | ||
| 1do9_A | 94 | Solution Structure Of Oxidized Microsomal Rabbit Cy | 2e-19 | ||
| 1cyo_A | 93 | Bovine Cytochrome B(5) Length = 93 | 4e-19 | ||
| 1hko_A | 104 | Nmr Structure Of Bovine Cytochrome B5 Length = 104 | 4e-19 | ||
| 2ibj_A | 88 | Structure Of House Fly Cytochrome B5 Length = 88 | 5e-19 | ||
| 1ehb_A | 82 | Crystal Structure Of Recombinant Trypsin-Solubilize | 6e-19 | ||
| 1u9u_A | 82 | Crystal Structure Of F58y Mutant Of Cytochrome B5 L | 1e-18 | ||
| 1m20_A | 82 | Crystal Structure Of F35y Mutant Of Trypsin-Solubil | 1e-18 | ||
| 1bfx_A | 99 | The Solution Nmr Structure Of The B Form Of Oxidize | 2e-18 | ||
| 1i87_A | 98 | Solution Structure Of The Water-Soluble Fragment Of | 2e-18 | ||
| 1blv_A | 94 | Solution Structure Of Oxidized Rat Microsomal Cytoc | 2e-18 | ||
| 1aqa_A | 94 | Solution Structure Of Reduced Microsomal Rat Cytoch | 2e-18 | ||
| 1u9m_A | 82 | Crystal Structure Of F58w Mutant Of Cytochrome B5 L | 2e-18 | ||
| 1lr6_A | 82 | Crystal Structure Of V45y Mutant Of Cytochrome B5 L | 2e-18 | ||
| 1i5u_A | 82 | Solution Structure Of Cytochrome B5 Triple Mutant ( | 3e-18 | ||
| 1lqx_A | 82 | Crystal Structure Of V45e Mutant Of Cytochrome B5 L | 3e-18 | ||
| 1m2i_A | 82 | Crystal Structure Of E44aE56A MUTANT OF CYTOCHROME | 4e-18 | ||
| 1sh4_A | 82 | Solution Structure Of Oxidized Bovine Microsomal Cy | 4e-18 | ||
| 1es1_A | 82 | Crystal Structure Of Val61his Mutant Of Trypsin-Sol | 4e-18 | ||
| 1j0q_A | 82 | Solution Structure Of Oxidized Bovine Microsomal Cy | 5e-18 | ||
| 1ib7_A | 94 | Solution Structure Of F35y Mutant Of Rat Ferro Cyto | 5e-18 | ||
| 1m59_A | 82 | Crystal Structure Of P40v Mutant Of Trypsin-Solubil | 6e-18 | ||
| 1jex_A | 94 | Solution Structure Of A67v Mutant Of Rat Ferro Cyto | 7e-18 | ||
| 1m2m_A | 82 | Crystal Structure Of E44aE48AE56AD60A MUTANT OF Cyt | 1e-17 | ||
| 1f03_A | 82 | Solution Structure Of Oxidized Bovine Microsomal Cy | 1e-17 | ||
| 3ks0_A | 95 | Crystal Structure Of The Heme Domain Of Flavocytoch | 9e-12 | ||
| 1ldc_A | 511 | X-Ray Structure Of Two Complexes Of The Y143f Flavo | 3e-11 | ||
| 1szf_A | 511 | A198g:l230a Mutant Flavocytochrome B2 With Pyruvate | 3e-11 | ||
| 1sze_A | 511 | L230a Mutant Flavocytochrome B2 With Benzoylformate | 3e-11 | ||
| 1fcb_A | 511 | Molecular Structure Of Flavocytochrome B2 At 2.4 An | 3e-11 | ||
| 1ltd_A | 506 | The 2.6 Angstroms Refined Structure Of The Escheric | 3e-11 | ||
| 3lf5_A | 88 | Structure Of Human Nadh Cytochrome B5 Oxidoreductas | 4e-11 | ||
| 2oz0_A | 511 | Mechanistic And Structural Studies Of H373q Flavocy | 5e-11 | ||
| 1cxy_A | 90 | Structure And Characterization Of Ectothiorhodospir | 3e-10 | ||
| 1x3x_A | 82 | Crystal Structure Of Cytochrome B5 From Ascaris Suu | 3e-08 | ||
| 1mj4_A | 82 | Crystal Structure Analysis Of The Cytochrome B5 Dom | 2e-05 |
| >pdb|3NER|A Chain A, Structure Of Human Type B Cytochrome B5 Length = 92 | Back alignment and structure |
|
| >pdb|3MUS|A Chain A, 2a Resolution Structure Of Rat Type B Cytochrome B5 Length = 87 | Back alignment and structure |
| >pdb|1AWP|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5 Length = 92 | Back alignment and structure |
| >pdb|1B5M|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5 Length = 84 | Back alignment and structure |
| >pdb|2I89|A Chain A, Structure Of Septuple Mutant Of Rat Outer Mitochondrial Membrane Cytochrome B5 Length = 93 | Back alignment and structure |
| >pdb|1EUE|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5 Length = 86 | Back alignment and structure |
| >pdb|1ICC|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5 Length = 87 | Back alignment and structure |
| >pdb|1LJ0|A Chain A, Structure Of Quintuple Mutant Of The Rat Outer Mitocondrial Cytochrome B5. Length = 92 | Back alignment and structure |
| >pdb|2I96|A Chain A, Solution Structure Of The Oxidized Microsomal Human Cytochrome B5 Length = 108 | Back alignment and structure |
| >pdb|3OZZ|B Chain B, Structure Of A Cytochrome B5 Core-Swap Mutant Length = 82 | Back alignment and structure |
| >pdb|2M33|A Chain A, Solution Nmr Structure Of Full-length Oxidized Microsomal Rabbit Cytochrome B5 Length = 104 | Back alignment and structure |
| >pdb|1DO9|A Chain A, Solution Structure Of Oxidized Microsomal Rabbit Cytochrome B5. Factors Determining The Heterogeneous Binding Of The Heme Length = 94 | Back alignment and structure |
| >pdb|1CYO|A Chain A, Bovine Cytochrome B(5) Length = 93 | Back alignment and structure |
| >pdb|1HKO|A Chain A, Nmr Structure Of Bovine Cytochrome B5 Length = 104 | Back alignment and structure |
| >pdb|2IBJ|A Chain A, Structure Of House Fly Cytochrome B5 Length = 88 | Back alignment and structure |
| >pdb|1EHB|A Chain A, Crystal Structure Of Recombinant Trypsin-Solubilized Fragment Of Cytochrome B5 Length = 82 | Back alignment and structure |
| >pdb|1U9U|A Chain A, Crystal Structure Of F58y Mutant Of Cytochrome B5 Length = 82 | Back alignment and structure |
| >pdb|1M20|A Chain A, Crystal Structure Of F35y Mutant Of Trypsin-Solubilized Fragment Of Cytochrome B5 Length = 82 | Back alignment and structure |
| >pdb|1BFX|A Chain A, The Solution Nmr Structure Of The B Form Of Oxidized Rat Microsomal Cytochrome B5, Minimized Average Structure Length = 99 | Back alignment and structure |
| >pdb|1I87|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat Hepatic Apocytochrome B5 Length = 98 | Back alignment and structure |
| >pdb|1BLV|A Chain A, Solution Structure Of Oxidized Rat Microsomal Cytochrome B5 In The Presence Of 2 M Guanidinium Chloride: Monitoring The Early Steps In Protein Unfolding Length = 94 | Back alignment and structure |
| >pdb|1AQA|A Chain A, Solution Structure Of Reduced Microsomal Rat Cytochrome B5, Nmr, Minimized Average Structure Length = 94 | Back alignment and structure |
| >pdb|1U9M|A Chain A, Crystal Structure Of F58w Mutant Of Cytochrome B5 Length = 82 | Back alignment and structure |
| >pdb|1LR6|A Chain A, Crystal Structure Of V45y Mutant Of Cytochrome B5 Length = 82 | Back alignment and structure |
| >pdb|1I5U|A Chain A, Solution Structure Of Cytochrome B5 Triple Mutant (E48aE56AD60A) Length = 82 | Back alignment and structure |
| >pdb|1LQX|A Chain A, Crystal Structure Of V45e Mutant Of Cytochrome B5 Length = 82 | Back alignment and structure |
| >pdb|1M2I|A Chain A, Crystal Structure Of E44aE56A MUTANT OF CYTOCHROME B5 Length = 82 | Back alignment and structure |
| >pdb|1SH4|A Chain A, Solution Structure Of Oxidized Bovine Microsomal Cytochrome B5 Mutant V45h Length = 82 | Back alignment and structure |
| >pdb|1ES1|A Chain A, Crystal Structure Of Val61his Mutant Of Trypsin-Solubilized Fragment Of Cytochrome B5 Length = 82 | Back alignment and structure |
| >pdb|1J0Q|A Chain A, Solution Structure Of Oxidized Bovine Microsomal Cytochrome B5 Mutant V61h Length = 82 | Back alignment and structure |
| >pdb|1M59|A Chain A, Crystal Structure Of P40v Mutant Of Trypsin-Solubilized Fragment Of Cytochrome B5 Length = 82 | Back alignment and structure |
| >pdb|1JEX|A Chain A, Solution Structure Of A67v Mutant Of Rat Ferro Cytochrome B5 Length = 94 | Back alignment and structure |
| >pdb|1M2M|A Chain A, Crystal Structure Of E44aE48AE56AD60A MUTANT OF Cytochrome B5 Length = 82 | Back alignment and structure |
| >pdb|1F03|A Chain A, Solution Structure Of Oxidized Bovine Microsomal Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its Interaction With Cytochrome C Length = 82 | Back alignment and structure |
| >pdb|3KS0|A Chain A, Crystal Structure Of The Heme Domain Of Flavocytochrome B2 In Complex With Fab B2b4 Length = 95 | Back alignment and structure |
| >pdb|1LDC|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f Flavocytochrome B2 Mutant Crystallized In The Presence Of Lactate Or Phenyl-Lactate Length = 511 | Back alignment and structure |
| >pdb|1SZF|A Chain A, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound Length = 511 | Back alignment and structure |
| >pdb|1SZE|A Chain A, L230a Mutant Flavocytochrome B2 With Benzoylformate Length = 511 | Back alignment and structure |
| >pdb|1FCB|A Chain A, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms Resolution Length = 511 | Back alignment and structure |
| >pdb|1LTD|A Chain A, The 2.6 Angstroms Refined Structure Of The Escherichia Coli Recombinant Saccharomyces Cerevisiae Flavocytochrome B2-Sulphite Complex Length = 506 | Back alignment and structure |
| >pdb|3LF5|A Chain A, Structure Of Human Nadh Cytochrome B5 Oxidoreductase (Ncb5or) B5 Domain To 1.25a Resolution Length = 88 | Back alignment and structure |
| >pdb|2OZ0|A Chain A, Mechanistic And Structural Studies Of H373q Flavocytochrome B2: Effects Of Mutating The Active Site Base Length = 511 | Back alignment and structure |
| >pdb|1CXY|A Chain A, Structure And Characterization Of Ectothiorhodospira Vacuolata Cytochrome B558, A Prokaryotic Homologue Of Cytochrome B5 Length = 90 | Back alignment and structure |
| >pdb|1X3X|A Chain A, Crystal Structure Of Cytochrome B5 From Ascaris Suum Length = 82 | Back alignment and structure |
| >pdb|1MJ4|A Chain A, Crystal Structure Analysis Of The Cytochrome B5 Domain Of Human Sulfite Oxidase Length = 82 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 134 | |||
| 3ner_A | 92 | Cytochrome B5 type B; heme, electron transport; HE | 3e-43 | |
| 1cyo_A | 93 | Cytochrome B5; electron transport; HET: HEM; 1.50A | 7e-42 | |
| 2ibj_A | 88 | Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY dif | 9e-42 | |
| 1hko_A | 104 | Cytochrome B5; electron transfer protein, heme, el | 2e-41 | |
| 3lf5_A | 88 | Cytochrome B5 reductase 4; NCB5OR, electron transf | 4e-41 | |
| 1cxy_A | 90 | Cytochrome B5; helix, beta-strand, electron transp | 2e-39 | |
| 2keo_A | 112 | Probable E3 ubiquitin-protein ligase HERC2; protei | 1e-37 | |
| 1x3x_A | 82 | Cytochrome B5; hemoprotein, porcine parasitic nama | 4e-34 | |
| 1mj4_A | 82 | Sulfite oxidase; cytochrome B5, heme, oxidoreducta | 1e-33 | |
| 1kbi_A | 511 | Cytochrome B2, L-LCR; flavocytochrome B2, electron | 6e-25 | |
| 1sox_A | 466 | Sulfite oxidase; oxidoreductase, sulfite oxidation | 1e-12 |
| >3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A* Length = 92 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 3e-43
Identities = 44/86 (51%), Positives = 61/86 (70%)
Query: 1 MASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFE 60
+ + ++ EEVA N K+ WL+I G+VYDV+ F+++HPGG+EVL+ G DA+ FE
Sbjct: 5 VETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFE 64
Query: 61 DVGHSDSAREMMDKYYIGDIDPSTVP 86
DVGHS AREM+ +YYIGDI PS +
Sbjct: 65 DVGHSSDAREMLKQYYIGDIHPSDLK 90
|
| >1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ... Length = 93 | Back alignment and structure |
|---|
| >2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica} Length = 88 | Back alignment and structure |
|---|
| >1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A* Length = 104 | Back alignment and structure |
|---|
| >3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens} Length = 88 | Back alignment and structure |
|---|
| >1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1 Length = 90 | Back alignment and structure |
|---|
| >2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens} Length = 112 | Back alignment and structure |
|---|
| >1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum} Length = 82 | Back alignment and structure |
|---|
| >1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1 Length = 82 | Back alignment and structure |
|---|
| >1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A* Length = 511 | Back alignment and structure |
|---|
| >1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A* Length = 466 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 134 | |||
| 3ner_A | 92 | Cytochrome B5 type B; heme, electron transport; HE | 99.97 | |
| 1cyo_A | 93 | Cytochrome B5; electron transport; HET: HEM; 1.50A | 99.97 | |
| 3lf5_A | 88 | Cytochrome B5 reductase 4; NCB5OR, electron transf | 99.96 | |
| 1hko_A | 104 | Cytochrome B5; electron transfer protein, heme, el | 99.96 | |
| 2ibj_A | 88 | Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY dif | 99.96 | |
| 1cxy_A | 90 | Cytochrome B5; helix, beta-strand, electron transp | 99.95 | |
| 1mj4_A | 82 | Sulfite oxidase; cytochrome B5, heme, oxidoreducta | 99.95 | |
| 1x3x_A | 82 | Cytochrome B5; hemoprotein, porcine parasitic nama | 99.95 | |
| 2keo_A | 112 | Probable E3 ubiquitin-protein ligase HERC2; protei | 99.94 | |
| 1sox_A | 466 | Sulfite oxidase; oxidoreductase, sulfite oxidation | 99.88 | |
| 1kbi_A | 511 | Cytochrome B2, L-LCR; flavocytochrome B2, electron | 99.86 | |
| 1j03_A | 102 | Putative steroid binding protein; alpha and beta, | 99.73 |
| >3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=175.63 Aligned_cols=83 Identities=53% Similarity=1.008 Sum_probs=78.8
Q ss_pred CCCCCcCHHHHhcccCCCCeEEEEcCEEEeccccCCCCCChHHHHHHhhCCCCchhhhhcCCCHHHHHhhhcCeeEEeCC
Q 032759 3 SDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDP 82 (134)
Q Consensus 3 ~~~~~~t~~ev~~h~~~~~~wvvi~g~VYDvt~f~~~HPGG~~~l~~~aG~D~T~~f~~~~Hs~~a~~~l~~~~VG~l~~ 82 (134)
++++.||++||++|++.++|||+|+|+|||||+|+..||||..+|+.++|+|+|+.|+.++||.+|+++|++|+||+|.+
T Consensus 7 ~~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~l~~~aG~DaT~~F~~~~Hs~~a~~~L~~~~IG~l~~ 86 (92)
T 3ner_A 7 TSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHP 86 (92)
T ss_dssp CCSCEECHHHHTTCEETTEEEEEETTEEEECGGGTTTCTTCSHHHHTTTTSBCHHHHHHTTCCHHHHHHHGGGEEEEECG
T ss_pred CCCCeeCHHHHHhhCCCCCEEEEECCEEEEcccccccCCCHHHHHHHhcCCcchHHHHHcCCCHHHHHHHHhCeeEEECh
Confidence 46899999999999999999999999999999999999999999999999999999998889999999999999999987
Q ss_pred CCC
Q 032759 83 STV 85 (134)
Q Consensus 83 ~~~ 85 (134)
++.
T Consensus 87 ~~~ 89 (92)
T 3ner_A 87 SDL 89 (92)
T ss_dssp GGS
T ss_pred Hhc
Confidence 653
|
| >1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ... | Back alignment and structure |
|---|
| >3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens} | Back alignment and structure |
|---|
| >1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A* | Back alignment and structure |
|---|
| >2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica} | Back alignment and structure |
|---|
| >1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1 | Back alignment and structure |
|---|
| >1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1 | Back alignment and structure |
|---|
| >1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum} | Back alignment and structure |
|---|
| >2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A* | Back alignment and structure |
|---|
| >1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A* | Back alignment and structure |
|---|
| >1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 134 | ||||
| d1cyoa_ | 88 | d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [Ta | 5e-32 | |
| d1euea_ | 86 | d.120.1.1 (A:) Cytochrome b5 {Rat (Rattus norvegic | 7e-32 | |
| d1cxya_ | 81 | d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira | 4e-30 | |
| d1mj4a_ | 80 | d.120.1.1 (A:) Sulfite oxidase, N-terminal domain | 3e-28 | |
| d1soxa2 | 91 | d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal dom | 2e-27 | |
| d1kbia2 | 97 | d.120.1.1 (A:1-97) Flavocytochrome b2, N-terminal | 4e-27 |
| >d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]} Length = 88 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cytochrome b5-like heme/steroid binding domain superfamily: Cytochrome b5-like heme/steroid binding domain family: Cytochrome b5 domain: Cytochrome b5 species: Cow (Bos taurus) [TaxId: 9913]
Score = 106 bits (267), Expect = 5e-32
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 6 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHS 65
K + EE+ HN +K WLI+ KVYD++ F+++HPGG+EVL G DAT +FEDVGHS
Sbjct: 5 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHS 64
Query: 66 DSAREMMDKYYIGDIDPSTVPR 87
ARE+ + IG++ P +
Sbjct: 65 TDARELSKTFIIGELHPDDRSK 86
|
| >d1euea_ d.120.1.1 (A:) Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86 | Back information, alignment and structure |
|---|
| >d1cxya_ d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira vacuolata [TaxId: 1054]} Length = 81 | Back information, alignment and structure |
|---|
| >d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 80 | Back information, alignment and structure |
|---|
| >d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 91 | Back information, alignment and structure |
|---|
| >d1kbia2 d.120.1.1 (A:1-97) Flavocytochrome b2, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 97 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 134 | |||
| d1cyoa_ | 88 | Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]} | 99.97 | |
| d1euea_ | 86 | Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 101 | 99.97 | |
| d1cxya_ | 81 | Cytochrome b558 {Ectothiorhodospira vacuolata [Tax | 99.96 | |
| d1soxa2 | 91 | Sulfite oxidase, N-terminal domain {Chicken (Gallu | 99.96 | |
| d1kbia2 | 97 | Flavocytochrome b2, N-terminal domain {Baker's yea | 99.95 | |
| d1mj4a_ | 80 | Sulfite oxidase, N-terminal domain {Human (Homo sa | 99.95 | |
| d1t0ga_ | 109 | Putative steroid binding protein AT2G24940 {Thale | 98.62 |
| >d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cytochrome b5-like heme/steroid binding domain superfamily: Cytochrome b5-like heme/steroid binding domain family: Cytochrome b5 domain: Cytochrome b5 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=1.1e-32 Score=182.42 Aligned_cols=83 Identities=46% Similarity=0.863 Sum_probs=78.9
Q ss_pred CCCCCcCHHHHhcccCCCCeEEEEcCEEEeccccCCCCCChHHHHHHhhCCCCchhhhhcCCCHHHHHhhhcCeeEEeCC
Q 032759 3 SDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDP 82 (134)
Q Consensus 3 ~~~~~~t~~ev~~h~~~~~~wvvi~g~VYDvt~f~~~HPGG~~~l~~~aG~D~T~~f~~~~Hs~~a~~~l~~~~VG~l~~ 82 (134)
..++.||++||++|++.++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|+.+|||..++++|+.|+||+|.+
T Consensus 2 ~~~k~yt~~Ev~~H~~~~d~Wvii~g~VYDvT~f~~~HPGG~~~i~~~aG~D~T~~F~~~~hs~~a~~~l~~~~IG~l~~ 81 (88)
T d1cyoa_ 2 KAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHP 81 (88)
T ss_dssp CSCCEECHHHHTTCEETTEEEEEETTEEEECTTTTTTCTTCSHHHHHHTTSBCHHHHHHTTCCHHHHHHHTTTEEEEECG
T ss_pred CccccccHHHHHhhCCCCCeEEEECCEEEecchhhcccCCchHHHHHHcCCchHHHHHHHCCCHHHHHHHHcCccEEECc
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCC
Q 032759 83 STV 85 (134)
Q Consensus 83 ~~~ 85 (134)
++.
T Consensus 82 ~~~ 84 (88)
T d1cyoa_ 82 DDR 84 (88)
T ss_dssp GGG
T ss_pred ccc
Confidence 543
|
| >d1euea_ d.120.1.1 (A:) Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1cxya_ d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira vacuolata [TaxId: 1054]} | Back information, alignment and structure |
|---|
| >d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kbia2 d.120.1.1 (A:1-97) Flavocytochrome b2, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1t0ga_ d.120.1.2 (A:) Putative steroid binding protein AT2G24940 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|